Pregenerated sensors for SEPTIN9-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000263718Ensembl transcript IDs: ENST00000581153.1, ENST00000581657.1, ENST00000582422.1, ENST00000632028.1, ENST00000632813.1, ENST00000634135.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTCCCTGAGTGCCTGCGGCCGGGAGTGGCGAGGCGCCCCCGGAGCTaGGCGAGTCCCCGCGGCGGGCACACTGCAGGTCGAGTTCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LPECLRPGVARRPRS*ASPRGGHTAGRVPP Trigger: GGGAGGAACTCGACCTGCAGTGTGCCCGCCGCGGGGACTCGCTCAGCTCCGGGGGCGCCTCGCCACTCCCGGCCGCAGGCACTCAGGGAG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS GCA 90 bp | GGCGAGGCGCCCCCGGAGCTGAGCGAGTCCCCGCGGCGGGCACACTaGAGGTCGAGTTCCTCCCAGGACAGGGCCGCTGTCGGGCCGCTT | + |
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Preference number: 5 (lower is better) Translates to: GEAPPELSESPRRAH*RSSSSQDRAAVGPL Trigger: AAGCGGCCCGACAGCGGCCCTGTCCTGGGAGGAACTCGACCTGCAGTGTGCCCGCCGCGGGGACTCGCTCAGCTCCGGGGGCGCCTCGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS GCA 90 bp | ACAGGGCCGCTGTCGGGCCGCTTTCGACCTGAGCCGACCGTCCCCTaGGCTGTCTCCAGCCCTTGCTCGAGTGTCGGAGGGGCTGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: TGPLSGRFRPEPTVP*AVSSPCSSVGGAAL Trigger: CAGGGCAGCCCCTCCGACACTCGAGCAAGGGCTGGAGACAGCGCAGGGGACGGTCGGCTCAGGTCGAAAGCGGCCCGACAGCGGCCCTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS TCA 90 bp | TCGAGTTCCTCCCAGGACAGGGCCGCTGTCGGGCCGCTTTCGACCTaGGCCGACCGTCCCCTGCGCTGTCTCCAGCCCTTGCTCGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: SSSSQDRAAVGPLST*ADRPLRCLQPLLEC Trigger: ACACTCGAGCAAGGGCTGGAGACAGCGCAGGGGACGGTCGGCTCAGGTCGAAAGCGGCCCGACAGCGGCCCTGTCCTGGGAGGAACTCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS CCA 90 bp | GGGGAGGGAAGCATTAGTGCTGCCGGGTGGAAGGTGGACGGCGCCTaGATCCAGACCCAGCAGTGCTCATGGGGCCAGGCCTGGTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: GEGSISAAGWKVDGA*IQTQQCSWGQAWCS Trigger: CGAGCACCAGGCCTGGCCCCATGAGCACTGCTGGGTCTGGATCCAGGCGCCGTCCACCTTCCACCCGGCAGCACTAATGCTTCCCTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000581657.1 ENST00000582422.1 ENST00000632813.1 ENST00000634135.1 |
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| CDS CCA 90 bp | ATAAGGGCCAGTGCAGCCGGGGAGGGAAGCATTAGTGCTGCCGGGTaGAAGGTGGACGGCGCCTGGATCCAGACCCAGCAGTGCTCATGG | + |
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Preference number: 5 (lower is better) Translates to: IRASAAGEGSISAAG*KVDGAWIQTQQCSW Trigger: CCATGAGCACTGCTGGGTCTGGATCCAGGCGCCGTCCACCTTCCACCCGGCAGCACTAATGCTTCCCTCCCCGGCTGCACTGGCCCTTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000581657.1 ENST00000582422.1 ENST00000632813.1 ENST00000634135.1 |
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| CDS TCA 90 bp | CTTTGGCTTACGCGGATACTGTATGTGAGTGTTGGCAGAGCAGCGTaGGCCTCGGCCTGCAAACTCAGGACGGCACCAAGCCCCATCGCC | + |
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Preference number: 5 (lower is better) Translates to: LWLTRILYVSVGRAA*ASACKLRTAPSPIA Trigger: GGCGATGGGGCTTGGTGCCGTCCTGAGTTTGCAGGCCGAGGCTCACGCTGCTCTGCCAACACTCACATACAGTATCCGCGTAAGCCAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581657.1 ENST00000632813.1 |
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| CDS TCA 90 bp | CAGCCTTTGATGCGGATACTGTATGTGAGTGTTGGCAGAGCAGCGTaGGCCTCGGCCTGCAAACTCAGGACGGCACCAAGCCCCATCGCC | + |
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Preference number: 5 (lower is better) Translates to: QPLMRILYVSVGRAA*ASACKLRTAPSPIA Trigger: GGCGATGGGGCTTGGTGCCGTCCTGAGTTTGCAGGCCGAGGCTCACGCTGCTCTGCCAACACTCACATACAGTATCCGCATCAAAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582422.1 ENST00000634135.1 |
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| CDS GCA 90 bp | GGGCTCAGGTGGTCTGACTCCCACTTGGTAGCTCCGGGCTCTGAATaGAAGGAGCCCAGAGAACACAGTAGCAGCTGCAGCCCCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GLRWSDSHLVAPGSE*KEPREHSSSCSPFS Trigger: AGAGAAGGGGCTGCAGCTGCTACTGTGTTCTCTGGGCTCCTTGCATTCAGAGCCCGGAGCTACCAAGTGGGAGTCAGACCACCTGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS GCA 90 bp | TCAGCTGGTCCCCAGACCAGACCCTCCATTCTTGGCAGGCACTTCTaGCTCCTCTGTCAGTTACAGTTGGACAGTTCCTCCCTGAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: SAGPQTRPSILGRHF*LLCQLQLDSSSLSA Trigger: GGCACTCAGGGAGGAACTGTCCAACTGTAACTGACAGAGGAGGCAGAAGTGCCTGCCAAGAATGGAGGGTCTGGTCTGGGGACCAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS CCA 90 bp | ACTTGGCCACACTCAGCCTTTGATGCGGATACTGTATGTGAGTGTTaGCAGAGCAGCGTGAGCCTCGGCCTGCAAACTCAGGACGGCACC | + |
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Preference number: 5 (lower is better) Translates to: TWPHSAFDADTVCEC*QSSVSLGLQTQDGT Trigger: GGTGCCGTCCTGAGTTTGCAGGCCGAGGCTCACGCTGCTCTGCCAACACTCACATACAGTATCCGCATCAAAGGCTGAGTGTGGCCAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582422.1 ENST00000634135.1 |
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| CDS TCA 90 bp | GCTTTCTCCTTCACTTGGCCACACTCAGCCTTTGATCTGAAACAATaGAAGCCCCTGAGTCACTGGTCCTTCCCGAGCCCGTGTGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: AFSFTWPHSAFDLKQ*KPLSHWSFPSPCVA Trigger: GGCCACACACGGGCTCGGGAAGGACCAGTGACTCAGGGGCTTTCATTGTTTCAGATCAAAGGCTGAGTGTGGCCAAGTGAAGGAGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581657.1 ENST00000632813.1 |
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| CDS TCA 90 bp | TGCCCGCACAGGGGCTTTCTCCTTCACTTGGCCACACTCAGCCTTTaGTCTGAAACAATGAAAGCCCCTGAGTCACTGGTCCTTCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: CPHRGFLLHLATLSL*SETMKAPESLVLPE Trigger: CTCGGGAAGGACCAGTGACTCAGGGGCTTTCATTGTTTCAGATCAAAGGCTGAGTGTGGCCAAGTGAAGGAGAAAGCCCCTGTGCGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000581657.1 ENST00000632813.1 |
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| CDS CCA 90 bp | AAACTCAGGACGGCACCAAGCCCCATCGCCTTGGTATCTTCCAGGTaGACCCTCAGCCTGCTGAGTGGACAGGAAACCATCTGTCATTTA | + |
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Preference number: 5 (lower is better) Translates to: KLRTAPSPIALVSSR*TLSLLSGQETICHL Trigger: TAAATGACAGATGGTTTCCTGTCCACTCAGCAGGCTGAGGGTCCACCTGGAAGATACCAAGGCGATGGGGCTTGGTGCCGTCCTGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582422.1 ENST00000634135.1 |
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| CDS GCA 72 bp | CCCCCGGAGCTGAGCGAGTCCCCGCGGCGGGCACACTaGAGGTCGAGTTCCTCCCAGGACAGGGCCGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: PPELSESPRRAH*RSSSSQDRAAV Trigger: GACAGCGGCCCTGTCCTGGGAGGAACTCGACCTGCAGTGTGCCCGCCGCGGGGACTCGCTCAGCTCCGGGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS TCA 72 bp | TCCCAGGACAGGGCCGCTGTCGGGCCGCTTTCGACCTaGGCCGACCGTCCCCTGCGCTGTCTCCAGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SQDRAAVGPLST*ADRPLRCLQPL Trigger: CAAGGGCTGGAGACAGCGCAGGGGACGGTCGGCTCAGGTCGAAAGCGGCCCGACAGCGGCCCTGTCCTGGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS GCA 72 bp | CTGTCGGGCCGCTTTCGACCTGAGCCGACCGTCCCCTaGGCTGTCTCCAGCCCTTGCTCGAGTGTCGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: LSGRFRPEPTVP*AVSSPCSSVGG Trigger: CCCTCCGACACTCGAGCAAGGGCTGGAGACAGCGCAGGGGACGGTCGGCTCAGGTCGAAAGCGGCCCGACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS GCA 72 bp | GGCTGCCCTGGGGGACGCTCCCTCTTCCTCGCCCCTTaGACCCTCGCAGGAATCGCTGACTTTCCAGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: GCPGGRSLFLAP*TLAGIADFPGR Trigger: CCGACCTGGAAAGTCAGCGATTCCTGCGAGGGTGCAAGGGGCGAGGAAGAGGGAGCGTCCCCCAGGGCAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS GCA 72 bp | CCAGAGGCCCCTGGGCAGGGTGGACGCCTCTGCAGGTaGCCGCACAGGGGCTTTCTCCTTCACTTGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: PEAPGQGGRLCR*PHRGFLLHLAT Trigger: TGTGGCCAAGTGAAGGAGAAAGCCCCTGTGCGGGCACCTGCAGAGGCGTCCACCCTGCCCAGGGGCCTCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000581657.1 ENST00000582422.1 ENST00000632813.1 ENST00000634135.1 |
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| CDS GCA 72 bp | TGTCAGTTACAGTTGGACAGTTCCTCCCTGAGTGCCTaGGGCCGGGAGTGGCGAGGCGCCCCCGGAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: CQLQLDSSSLSA*GREWRGAPGAE Trigger: CTCAGCTCCGGGGGCGCCTCGCCACTCCCGGCCGCAGGCACTCAGGGAGGAACTGTCCAACTGTAACTGACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS CCA 72 bp | AGCATTAGTGCTGCCGGGTGGAAGGTGGACGGCGCCTaGATCCAGACCCAGCAGTGCTCATGGGGCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SISAAGWKVDGA*IQTQQCSWGQA Trigger: GGCCTGGCCCCATGAGCACTGCTGGGTCTGGATCCAGGCGCCGTCCACCTTCCACCCGGCAGCACTAATGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000581657.1 ENST00000582422.1 ENST00000632813.1 ENST00000634135.1 |
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| CDS CCA 72 bp | AGTGCAGCCGGGGAGGGAAGCATTAGTGCTGCCGGGTaGAAGGTGGACGGCGCCTGGATCCAGACCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SAAGEGSISAAG*KVDGAWIQTQQ Trigger: CTGCTGGGTCTGGATCCAGGCGCCGTCCACCTTCCACCCGGCAGCACTAATGCTTCCCTCCCCGGCTGCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000581657.1 ENST00000582422.1 ENST00000632813.1 ENST00000634135.1 |
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| CDS TCA 72 bp | CCTCTTCCTCGCCCCTTGCACCCTCGCAGGAATCGCTaGCTTTCCAGGTCGGCCGGGTGCTTTGGGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PLPRPLHPRRNR*LSRSAGCFGSL Trigger: CAGGGACCCAAAGCACCCGGCCGACCTGGAAAGTCAGCGATTCCTGCGAGGGTGCAAGGGGCGAGGAAGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS GCA 72 bp | TGGAAGGTGGACGGCGCCTGGATCCAGACCCAGCAGTaGTCATGGGGCCAGGCCTGGTGCTCGTTCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: WKVDGAWIQTQQ*SWGQAWCSFFL Trigger: GAGAAAGAACGAGCACCAGGCCTGGCCCCATGAGCACTGCTGGGTCTGGATCCAGGCGCCGTCCACCTTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000581657.1 ENST00000582422.1 ENST00000632813.1 ENST00000634135.1 |
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| CDS CCA 72 bp | GGGAAGCCCCCAAGTAGGTGCCCTGGTCGACAGCCCTaGTGCCAGCAGTATGAGCCCGATGAGCCTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GKPPSRCPGRQP*CQQYEPDEPSA Trigger: AGCTGAAGGCTCATCGGGCTCATACTGCTGGCACCAGGGCTGTCGACCAGGGCACCTACTTGGGGGCTTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000581153.1 ENST00000581657.1 ENST00000632028.1 ENST00000632813.1 |
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| CDS CCA 72 bp | CCTGCAAACTCAGGACGGCACCAAGCCCCATCGCCTTaGTATCTTCCAGGTGGACCCTCAGCCTGCGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PANSGRHQAPSP*YLPGGPSACVG Trigger: CCCCACGCAGGCTGAGGGTCCACCTGGAAGATACCAAGGCGATGGGGCTTGGTGCCGTCCTGAGTTTGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581657.1 ENST00000632813.1 |
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| CDS CCA 72 bp | GTGGACGGCGCCTGGATCCAGACCCAGCAGTGCTCATaGGGCCAGGCCTGGTGCTCGTTCTTTCTCAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VDGAWIQTQQCS*GQAWCSFFLSP Trigger: AGGACTGAGAAAGAACGAGCACCAGGCCTGGCCCCATGAGCACTGCTGGGTCTGGATCCAGGCGCCGTCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000581657.1 ENST00000582422.1 ENST00000632813.1 ENST00000634135.1 |
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| CDS CAA 72 bp | GCCTGCAAACTCAGGACGGCACCAAGCCCCATCGCCTaGGTATCTTCCAGGTGGACCCTCAGCCTGCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: ACKLRTAPSPIA*VSSRWTLSLRG Trigger: CCCACGCAGGCTGAGGGTCCACCTGGAAGATACCAAGGCGATGGGGCTTGGTGCCGTCCTGAGTTTGCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581657.1 ENST00000632813.1 |
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| CDS GCA 72 bp | AAGCCCCCAAGTAGGTGCCCTGGTCGACAGCCCTGGTaGCAGCAGTATGAGCCCGATGAGCCTTCAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: KPPSRCPGRQPW*QQYEPDEPSAG Trigger: ACCAGCTGAAGGCTCATCGGGCTCATACTGCTGGCACCAGGGCTGTCGACCAGGGCACCTACTTGGGGGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000581153.1 ENST00000581657.1 ENST00000632028.1 ENST00000632813.1 |
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| CDS CAA 72 bp | GCAGGAATCGCTGACTTTCCAGGTCGGCCGGGTGCTTaGGGTCCCTGTGCGTCTGTGTGGGTGAATGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: AGIADFPGRPGA*GPCASVWVNGV Trigger: GACCCCATTCACCCACACAGACGCACAGGGACCCAAAGCACCCGGCCGACCTGGAAAGTCAGCGATTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS TCA 72 bp | ACGCGGATACTGTATGTGAGTGTTGGCAGAGCAGCGTaGGCCTCGGCCTGCAAACTCAGGACGGCACCAAGC | + |
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Preference number: 6 (lower is better) Translates to: TRILYVSVGRAA*ASACKLRTAPS Trigger: GCTTGGTGCCGTCCTGAGTTTGCAGGCCGAGGCTCACGCTGCTCTGCCAACACTCACATACAGTATCCGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581657.1 ENST00000632813.1 |
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| CDS TCA 72 bp | ATGCGGATACTGTATGTGAGTGTTGGCAGAGCAGCGTaGGCCTCGGCCTGCAAACTCAGGACGGCACCAAGC | + |
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Preference number: 6 (lower is better) Translates to: MRILYVSVGRAA*ASACKLRTAPS Trigger: GCTTGGTGCCGTCCTGAGTTTGCAGGCCGAGGCTCACGCTGCTCTGCCAACACTCACATACAGTATCCGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582422.1 ENST00000634135.1 |
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| CDS GCA 72 bp | CCCCAGACCAGACCCTCCATTCTTGGCAGGCACTTCTaGCTCCTCTGTCAGTTACAGTTGGACAGTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PQTRPSILGRHF*LLCQLQLDSSS Trigger: GGAGGAACTGTCCAACTGTAACTGACAGAGGAGGCAGAAGTGCCTGCCAAGAATGGAGGGTCTGGTCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581153.1 ENST00000632028.1 |
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| CDS TCA 72 bp | ACCTTGCAAGGTGGGGATTGTCCTCCCATCTGGCCATaGAGAGCTGAAGCAGAGAGGTGCAGTCGCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: TLQGGDCPPIWP*RAEAERCSRSS Trigger: AGATGAGCGACTGCACCTCTCTGCTTCAGCTCTTCATGGCCAGATGGGAGGACAATCCCCACCTTGCAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000581657.1 ENST00000582422.1 ENST00000632813.1 ENST00000634135.1 |
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| CDS CCA 72 bp | GTTTCTTTGGCTTACGCGGATACTGTATGTGAGTGTTaGCAGAGCAGCGTGAGCCTCGGCCTGCAAACTCAG | + |
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Preference number: 6 (lower is better) Translates to: VSLAYADTVCEC*QSSVSLGLQTQ Trigger: CTGAGTTTGCAGGCCGAGGCTCACGCTGCTCTGCCAACACTCACATACAGTATCCGCGTAAGCCAAAGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581657.1 ENST00000632813.1 |
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| CDS CCA 72 bp | CTTGGTATCTTCCAGGTGGACCCTCAGCCTGCTGAGTaGACAGGAAACCATCTGTCATTTAGGGTTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LGIFQVDPQPAE*TGNHLSFRVPA Trigger: AGCAGGAACCCTAAATGACAGATGGTTTCCTGTCCACTCAGCAGGCTGAGGGTCCACCTGGAAGATACCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582422.1 ENST00000634135.1 |
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| CDS TCA 72 bp | AGGGGCTTTCTCCTTCACTTGGCCACACTCAGCCTTTaGTCTGAAACAATGAAAGCCCCTGAGTCACTGGTC | + |
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Preference number: 6 (lower is better) Translates to: RGFLLHLATLSL*SETMKAPESLV Trigger: GACCAGTGACTCAGGGGCTTTCATTGTTTCAGATCAAAGGCTGAGTGTGGCCAAGTGAAGGAGAAAGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000581657.1 ENST00000632813.1 |
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