RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEPTIN8 (Homo sapiens)

Ensembl gene IDs: ENSG00000164402

Ensembl transcript IDs: ENST00000296873.11, ENST00000371478.2, ENST00000371493.7, ENST00000378699.6, ENST00000378701.5, ENST00000378706.5, ENST00000378719.7, ENST00000378721.8, ENST00000414594.5, ENST00000448933.5, ENST00000453480.5, ENST00000458488.2, ENST00000481030.1, ENST00000481794.5, ENST00000492490.1, ENST00000620483.4

Found 700 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGCATGGAGCCCCTCACAGGTAAAGGCTGCCTCTTCCTGGCCGTaGCTCGGTGGACACACACAGCTCACCCCTCCACTTCTCCCTGAG +
Preference number: 1 (lower is better)
Translates to: GAWSPSQVKAASSWP*LGGHTQLTPPLLPE
Trigger: CTCAGGGAGAAGTGGAGGGGTGAGCTGTGTGTGTCCACCGAGGCACGGCCAGGAAGAGGCAGCCTTTACCTGTGAGGGGCTCCATGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR GCA 90 bp CCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTaGGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACT +
Preference number: 1 (lower is better)
Translates to: PQAASHEYGLSVCLG*DPQATMDEWPSLHT
Trigger: AGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR GCA 90 bp GGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTaGCTCCTTCCTTCCAGTGTAAGTGGGACCACAGTGCATGAGGCA +
Preference number: 1 (lower is better)
Translates to: GHAAHSFQWWPLSAL*LLPSSVSGTTVHEA
Trigger: TGCCTCATGCACTGTGGTCCCACTTACACTGGAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
3UTR GCA 90 bp GCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTaGATACTCCAGAGTCCTAGGTTGGCCCATGAACCAGGAATTCTC +
Preference number: 1 (lower is better)
Translates to: AWGATRRPQWTNGQV*ILQSPRLAHEPGIL
Trigger: GAGAATTCCTGGTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR CCA 90 bp AGTATGGCCTTTCAGTATGCCTGGGGTGCGACCCGCAGGCCACAATaGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCC +
Preference number: 1 (lower is better)
Translates to: SMAFQYAWGATRRPQ*TNGQVCILQSPRLA
Trigger: GGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACTGAAAGGCCATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR TCA 90 bp ACTTCACAAAGCACTATGGCTCTGACTATTCCCCGAATGAGCTGCTaGGGATGGAGCTGGCTATTCTGGACAGACTGCACTGGGACCTCT +
Preference number: 1 (lower is better)
Translates to: TSQSTMALTIPRMSC*GWSWLFWTDCTGTS
Trigger: AGAGGTCCCAGTGCAGTCTGTCCAGAATAGCCAGCTCCATCCTCAGCAGCTCATTCGGGGAATAGTCAGAGCCATAGTGCTTTGTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR CCA 90 bp AATGAGCTGCTGAGGATGGAGCTGGCTATTCTGGACAGACTGCACTaGGACCTCTATATTGGGACGCCGCTGGACTTCTTGACTATAGTG +
Preference number: 1 (lower is better)
Translates to: NELLRMELAILDRLH*DLYIGTPLDFLTIV
Trigger: CACTATAGTCAAGAAGTCCAGCGGCGTCCCAATATAGAGGTCCCAGTGCAGTCTGTCCAGAATAGCCAGCTCCATCCTCAGCAGCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR TCA 90 bp GACAGCAAGATGGACACCGTGAAAGGGCAGTCAGTTTGGCATTTGTaGCGAGCAAAGCAGAGAATTCACCTCAGTTTGTGGTGTCCCAGG +
Preference number: 1 (lower is better)
Translates to: DSKMDTVKGQSVWHL*RAKQRIHLSLWCPR
Trigger: CCTGGGACACCACAAACTGAGGTGAATTCTCTGCTTTGCTCGTCACAAATGCCAAACTGACTGCCCTTTCACGGTGTCCATCTTGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378706.5
3UTR CCA 90 bp TTGGCCACAGGATGGGCATTAAGCCTCAAGCCCCTTACGGAGCCATaGATAGGAATGAAAAGGGTTGGGCAACATTTGATGTTCCCTGAT +
Preference number: 1 (lower is better)
Translates to: LATGWALSLKPLTEP*IGMKRVGQHLMFPD
Trigger: ATCAGGGAACATCAAATGTTGCCCAACCCTTTTCATTCCTATCCATGGCTCCGTAAGGGGCTTGAGGCTTAATGCCCATCCTGTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR CCA 90 bp CACAATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTaGCCCATGAACCAGGAATTCTCATTTCTTATGTATCCAATGAAC +
Preference number: 1 (lower is better)
Translates to: HNGRMAKSAYSRVLG*PMNQEFSFLMYPMN
Trigger: GTTCATTGGATACATAAGAAATGAGAATTCCTGGTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCCTGGCCGTGCCTCGGTaGACACACACAGCTCACCCC +
Preference number: 2 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCLAVPR*THTAHP
Trigger: GGGGTGAGCTGTGTGTGTCCACCGAGGCACGGCCAG...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCAAGGCTGCCTCTTCCTaGCCGTGCCTCGGTGGACAC +
Preference number: 2 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCKAASS*PCLGGH
Trigger: GTGTCCACCGAGGCACGGCCAGGAAGAGGCAGCCTT...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAGCCTCTTCCTGGCCGTaGCTCGGTGGACACACACAG +
Preference number: 2 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAASSWP*LGGHTQ
Trigger: CTGTGTGTGTCCACCGAGGCACGGCCAGGAAGAGGC...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATCAGTATGCCTGGGGTaGGACCCGCAGGCCACAATG +
Preference number: 2 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSASVCLG*DPQATM
Trigger: CATTGTGGCCTGCGGGTCGCACCCCAGGCATACTGA...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCATTAGCACGTCTTCCTaGGGCTTCCAGCCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCISTSS*GFQPGS
Trigger: ACTCCCTGGCTGGAAGCCTCAGGAAGACGTGCTAAT...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGATTAGCACGTCTTCCTaGGGCTTCCAGCCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: WGATRRPQWTNGQVCILQISTSS*GFQPGS
Trigger: ACTCCCTGGCTGGAAGCCTCAGGAAGACGTGCTAAT...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp TTTTTGGTCCCGGAGTGGAAGCTCAGCTTGGCCACAGGATGGGCATTAAGCCTCATGCCCTGGTGGTCCTaGGCTGGCCCCATGTGTTGG +
Preference number: 2 (lower is better)
Translates to: FLVPEWKLSLATGWALSLMPWWS*AGPMCW
Trigger: CCAACACATGGGGCCAGCTCAGGACCACCAGGGCAT...GAGGCTTAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR TCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAGCAAGATGGACACCGTaGAAGGGCAGTCAGTTTGGC +
Preference number: 2 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAARWTP*KGSQFG
Trigger: GCCAAACTGACTGCCCTTTCACGGTGTCCATCTTGC...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378706.5
3UTR-3UTR GCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAGGGCACCACGTGAGTTaGCATCTCCACGCTGAACAA +
Preference number: 2 (lower is better)
Translates to: RGALCIPLGSSSAQHGASGHHVS*HLHAEQ
Trigger: TTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAGGGCACCACGTGAGTTaGCATCTCCACGCTGAACAA +
Preference number: 2 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAGHHVS*HLHAEQ
Trigger: TTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCCAAGGCTGTAAACACTaGAGTCTGTACCGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCQGCKH*SLYRLP
Trigger: TGGGAGCCGGTACAGACTCCAGTGTTTACAGCCTTG...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGTCTGCTGCTGGAGCATaGAGCCCCTCACAGGTAAAG +
Preference number: 2 (lower is better)
Translates to: WGATRRPQWTNGQVCILQSAAGA*SPSQVK
Trigger: CTTTACCTGTGAGGGGCTCCATGCTCCAGCAGCAGA...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCATTGTCACTAGAACCTaGTCTGCTGCTGGAGCATGG +
Preference number: 2 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCIVTRT*SAAGAW
Trigger: CCATGCTCCAGCAGCAGAGCAGGTTCTAGTGACAAT...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCATTGCCATCTCCACGCTaGACAATTAGGCCTAGCATC +
Preference number: 2 (lower is better)
Translates to: RGALCIPLGSSSAQHGASLPSPR*TIRPSI
Trigger: GATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAA...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATATTAGCACGTCTTCCTaGGGCTTCCAGCCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHISTSS*GFQPGS
Trigger: ACTCCCTGGCTGGAAGCCTCAGGAAGACGTGCTAAT...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAGTCTGTCAAGTGTCCTaGAGATCCTGGGAAGGCTTA +
Preference number: 2 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAVCQVS*RSWEGL
Trigger: TAAGCCTTCCCAGGATCTTCAGGACACTTGACAGAC...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATTTGAGGGGAGCGTTGTaGATTCCTCTGGGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHLRGAL*IPLGSS
Trigger: GGAGCTACCCAGAGGAATGCACAACGCTCCCCTCAA...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp AATGAGCTGCTGAGGATGGAGCTGGCTATTCTGGACAGACTGCACTGGGACCTCTGGTCTCCAGTTCCATaGCCTGGTGGTCCTGAGCTG +
Preference number: 2 (lower is better)
Translates to: NELLRMELAILDRLHWDLWSPVP*PGGPEL
Trigger: CAGCTCAGGACCACCAGGGCATGGAACTGGAGACCA...GAGGTCCCAGTGCAGTCTGTCCAGAATAGCCAGCTCCATCCTCAGCAGCTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR CCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAGCCAGGACTTGGTCCTaGAAATCAATAATGCAAGCC +
Preference number: 2 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAARTWS*KSIMQA
Trigger: GGCTTGCATTATTGATTTCCAGGACCAAGTCCTGGC...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGGCCAGGACTTGGTCCTaGAAATCAATAATGCAAGCC +
Preference number: 2 (lower is better)
Translates to: WGATRRPQWTNGQVCILQARTWS*KSIMQA
Trigger: GGCTTGCATTATTGATTTCCAGGACCAAGTCCTGGC...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATTTGCCATCTCCACGCTaGACAATTAGGCCTAGCATC +
Preference number: 2 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHLPSPR*TIRPSI
Trigger: GATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAA...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGATGAGGGGAACTGGGTaGATTTTGCAGCATGTATAC +
Preference number: 2 (lower is better)
Translates to: WGATRRPQWTNGQVCILQMRGTG*ILQHVY
Trigger: GTATACATGCTGCAAAATTCACCCAGTTCCCCTCAT...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCACCGTATTCTCAACACTaGCATTCTTGGTGGCTTGTA +
Preference number: 2 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAPYSQH*HSWWLV
Trigger: TACAAGCCACCAAGAATGTCAGTGTTGAGAATACGG...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAAGGGGAAAGCTCCTTTaGCGCTCATTTTTCCCTAAT +
Preference number: 2 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSARGKLL*RSFFPN
Trigger: ATTAGGGAAAAATGAGCGGCAAAGGAGCTTTCCCCT...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACTATGGCCTTTCAGTATaGCTGGGGTGCGACCCGCAG +
Preference number: 2 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNYGLSV*LGCDPQ
Trigger: CTGCGGGTCGCACCCCAGGCATACTGAAAGGCCATA...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCACACAGACAACAGCTTTaGGCTGCTGTTCCATTTACA +
Preference number: 2 (lower is better)
Translates to: RGALCIPLGSSSAQHGASHRQQL*AAVPFT
Trigger: TGTAAATGGAACAGCAGCCCAAAGCTGTTGTCTGTG...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACACCCGCAGGCCACAATaGACGAATGGCCAAGTCTGC +
Preference number: 2 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNTRRPQ*TNGQVC
Trigger: GCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGT...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCATCAGTTTGGCATTTGTaGCGAGCAAAGCAGAGAATT +
Preference number: 2 (lower is better)
Translates to: RGALCIPLGSSSAQHGASSVWHL*RAKQRI
Trigger: AATTCTCTGCTTTGCTCGTCACAAATGCCAAACTGA...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378706.5
3UTR-3UTR GCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAGAACTGGGTGAATTTTaGAGCATGTATACCAGACCA +
Preference number: 2 (lower is better)
Translates to: RGALCIPLGSSSAQHGASELGEF*SMYTRP
Trigger: TGGTCTGGTATACATGCTGCAAAATTCACCCAGTTC...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACAAGGGGAAAGCTCCTTTaGCGCTCATTTTTCCCTAAT +
Preference number: 2 (lower is better)
Translates to: GALCIPLGSSSAQHGASTRGKLL*RSFFPN
Trigger: ATTAGGGAAAAATGAGCGGCAAAGGAGCTTTCCCCT...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACTTGAGGGGAGCGTTGTaGATTCCTCTGGGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNLRGAL*IPLGSS
Trigger: GGAGCTACCCAGAGGAATGCACAACGCTCCCCTCAA...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACACACAGACAACAGCTTTaGGCTGCTGTTCCATTTACA +
Preference number: 2 (lower is better)
Translates to: GALCIPLGSSSAQHGASTHRQQL*AAVPFT
Trigger: TGTAAATGGAACAGCAGCCCAAAGCTGTTGTCTGTG...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCCATAGCATAAAAAGTTaGATTGTCACTAGAACCTGC +
Preference number: 2 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCHSIKS*IVTRTC
Trigger: GCAGGTTCTAGTGACAATTCAACTTTTTATGCTATG...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACAACAACAGCTTTGGGCTaGTGTTCCATTTACATTCAC +
Preference number: 2 (lower is better)
Translates to: GALCIPLGSSSAQHGASTTTALG*CSIYIH
Trigger: GTGAATGTAAATGGAACAGCAGCCCAAAGCTGTTGT...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACCAAGGCTGTAAACACTaGAGTCTGTACCGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNQGCKH*SLYRLP
Trigger: TGGGAGCCGGTACAGACTCCAGTGTTTACAGCCTTG...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAATGAGGGGAACTGGGTaGATTTTGCAGCATGTATAC +
Preference number: 2 (lower is better)
Translates to: GPSLERHITAPSGNSDTVMRGTG*ILQHVY
Trigger: GTATACATGCTGCAAAATTCACCCAGTTCCCCTCAT...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACATTGTCACTAGAACCTaGTCTGCTGCTGGAGCATGG +
Preference number: 2 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNIVTRT*SAAGAW
Trigger: CCATGCTCCAGCAGCAGAGCAGGTTCTAGTGACAAT...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGCATTTGCCCTGGATATaGCAGTTTACCTTTTTAGAT +
Preference number: 2 (lower is better)
Translates to: WGATRRPQWTNGQVCILQHLPWI*QFTFLD
Trigger: ATCTAAAAAGGTAAACTGGCATATCCAGGGCAAATG...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp TGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTATGCTGGTGGTCCTGAGCTaGCCCCATGTGTTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: CFITKTGHRCQVAEFRLMLVVLS*PHVLEL
Trigger: CAGCTCCAACACATGGGGCCAGCTCAGGACCACCAG...CATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR TCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATCAACCTTTTTCCCACTaGGTACTCTTTACATTTGGA +
Preference number: 2 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHQPFSH*VLFTFG
Trigger: TCCAAATGTAAAGAGTACTCAGTGGGAAAAAGGTTG...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACTTCTTATGTATCCAATaGACCTGCTGGGTCACCAGG +
Preference number: 2 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNFLCIQ*TCWVTR
Trigger: CCTGGTGACCCAGCAGGTTCATTGGATACATAAGAA...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp CACATGCACCACAGTGAGGTGACGCACAAGGCTCATGACATACGGAAGAGTGAAGGGTTGGGCAACATTTaGTGTTCCCTGATGGAAATT +
Preference number: 2 (lower is better)
Translates to: HMHHSEVTHKAHDIRKSEGLGNI*CSLMEI
Trigger: AATTTCCATCAGGGAACATCAAATGTTGCCCAACCC...TTCACTCTTCCGTATGTCATGAGCCTTGTGCGTCACCTCACTGTGGTGCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR GCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATTTTACATTTGGAATATaGAGGATTTGCTTGGGAGTC +
Preference number: 2 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHFTFGI*RICLGV
Trigger: GACTCCCAAGCAAATCCTGCATATTCCAAATGTAAA...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACAGGGGAAAGCTCCTTTaGCGCTCATTTTTCCCTAAT +
Preference number: 2 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNRGKLL*RSFFPN
Trigger: ATTAGGGAAAAATGAGCGGCAAAGGAGCTTTCCCCT...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp GGTCATATCAAGAACTCTCCTCTAGTCCAGAACCCATTTTACAGATGGAGATGCCCGTTGAGTGCCCTCTaGCTCCTTCCTTCCAGTGTA +
Preference number: 2 (lower is better)
Translates to: GHIKNSPLVQNPFYRWRCPLSAL*LLPSSV
Trigger: TACACTGGAAGGAAGGAGGCAGAGGGCACTCAACGG...GCATCTCCATCTGTAAAATGGGTTCTGGACTAGAGGAGAGTTCTTGATATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
3UTR CAA 90 bp AGTAAGGAGGTGTTTACAGAGTCTACCCTAAACTCGTTTGTGCCTTaGGAACAGCTGTTTACAACATGGGATGGCAAAGCACAGGCGTGC +
Preference number: 2 (lower is better)
Translates to: SKEVFTESTLNSFVP*EQLFTTWDGKAQAC
Trigger: GCACGCCTGTGCTTTGCCATCCCATGTTGTAAACAGCTGTTCCAAAGGCACAAACGAGTTTAGGGTAGACTCTGTAAACACCTCCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR GCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACGAACTGGGTGAATTTTaGAGCATGTATACCAGACCA +
Preference number: 2 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNELGEF*SMYTRP
Trigger: TGGTCTGGTATACATGCTGCAAAATTCACCCAGTTC...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR CAA 90 bp CCACAATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTaGGCCCATGAACCAGGAATTCTCATTTCTTATGTATCCAATGAA +
Preference number: 2 (lower is better)
Translates to: PQWTNGQVCILQSPR*AHEPGILISYVSNE
Trigger: TTCATTGGATACATAAGAAATGAGAATTCCTGGTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp ACTGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTACCCCTTACGGAGCCATaGATAGGAATGAAAAGGGTT +
Preference number: 2 (lower is better)
Translates to: TVSLRKLATVAKLQSFVLPLTEP*IGMKRV
Trigger: AACCCTTTTCATTCCTATCCATGGCTCCGTAAGGGG...TAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR CCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTTCTGCTGCTGGAGCATaGAGCCCCTCACAGGTAAAG +
Preference number: 2 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFSAAGA*SPSQVK
Trigger: CTTTACCTGTGAGGGGCTCCATGCTCCAGCAGCAGA...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR TCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTAGGGGGAAATGGTCATaGGAAGGAAGACAGGGGCAT +
Preference number: 2 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFRGKWS*EGRQGH
Trigger: ATGCCCCTGTCTTCCTTCTCATGACCATTTCCCCCT...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp GAGGTGTTTACAGAGTCTACCCTAAACTCGTTTGTGCCTTTGGAACAGCTGTTTAGGAATGAAAAGGGTTaGGCAACATTTGATGTTCCC +
Preference number: 2 (lower is better)
Translates to: EVFTESTLNSFVPLEQLFRNEKG*ATFDVP
Trigger: GGGAACATCAAATGTTGCCCAACCCTTTTCATTCCT...AAACAGCTGTTCCAAAGGCACAAACGAGTTTAGGGTAGACTCTGTAAACACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR TCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTTTGCCATCTCCACGCTaGACAATTAGGCCTAGCATC +
Preference number: 2 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFLPSPR*TIRPSI
Trigger: GATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAA...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp AGTATGTTTCTATTTTTCAGAATGGAAACATTGTCATCTAGGTACTTTCCGCTCTTTTTGGTCCCGGAGTaGAAGCTCAGCTTGGCCACA +
Preference number: 2 (lower is better)
Translates to: SMFLFFRMETLSSRYFPLFLVPE*KLSLAT
Trigger: TGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA...GAGCGGAAAGTACCTAGATGACAATGTTTCCATTCTGAAAAATAGAAACATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR TCA 90 bp TGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTATGTGCACTTTTGATCATTaGTATAGGAAAAGTATGGCG +
Preference number: 2 (lower is better)
Translates to: CFITKTGHRCQVAEFRLMCTFDH*YRKSMA
Trigger: CGCCATACTTTTCCTATATCAATGATCAAAAGTGCA...CATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR GCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTAGGGGAAAGCTCCTTTaGCGCTCATTTTTCCCTAAT +
Preference number: 2 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFRGKLL*RSFFPN
Trigger: ATTAGGGAAAAATGAGCGGCAAAGGAGCTTTCCCCT...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTCACAGACAACAGCTTTaGGCTGCTGTTCCATTTACA +
Preference number: 2 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFHRQQL*AAVPFT
Trigger: TGTAAATGGAACAGCAGCCCAAAGCTGTTGTCTGTG...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR GCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTTTTACATTTGGAATATaGAGGATTTGCTTGGGAGTC +
Preference number: 2 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFFTFGI*RICLGV
Trigger: GACTCCCAAGCAAATCCTGCATATTCCAAATGTAAA...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR GCA 72 bp CCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATaGCTGGGGTGCGACCCGCAGGCCACAATGGACGAA +
Preference number: 3 (lower is better)
Translates to: PQAASHEYGLSV*LGCDPQATMDE
Trigger: TTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR CCA 72 bp GCATGGAGCCCCTCACAGGTAAAGGCTGCCTCTTCCTaGCCGTGCCTCGGTGGACACACACAGCTCACCCCT +
Preference number: 3 (lower is better)
Translates to: AWSPSQVKAASS*PCLGGHTQLTP
Trigger: AGGGGTGAGCTGTGTGTGTCCACCGAGGCACGGCCAGGAAGAGGCAGCCTTTACCTGTGAGGGGCTCCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR GCA 72 bp AGCCCCTCACAGGTAAAGGCTGCCTCTTCCTGGCCGTaGCTCGGTGGACACACACAGCTCACCCCTCCACTT +
Preference number: 3 (lower is better)
Translates to: SPSQVKAASSWP*LGGHTQLTPPL
Trigger: AAGTGGAGGGGTGAGCTGTGTGTGTCCACCGAGGCACGGCCAGGAAGAGGCAGCCTTTACCTGTGAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR CCA 72 bp AGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTaGGGTGCGACCCGCAGGCCACAATGGACGAATGGC +
Preference number: 3 (lower is better)
Translates to: RQPATSMAFQYA*GATRRPQWTNG
Trigger: GCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR TCA 72 bp GCACCTAGGGCACCACGTGAGTTGCCATCTCCACGCTaGACAATTAGGCCTAGCATCCCGGCTGGGGCCTTC +
Preference number: 3 (lower is better)
Translates to: APRAPRELPSPR*TIRPSIPAGAF
Trigger: GAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCCTAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
3UTR GCA 72 bp GCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTaGGACCCGCAGGCCACAATGGACGAATGGCCAAGT +
Preference number: 3 (lower is better)
Translates to: ASHEYGLSVCLG*DPQATMDEWPS
Trigger: ACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR GCA 72 bp GCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTaGCTCCTTCCTTCCAGTGTAAGTGGGACCACAGTG +
Preference number: 3 (lower is better)
Translates to: AHSFQWWPLSAL*LLPSSVSGTTV
Trigger: CACTGTGGTCCCACTTACACTGGAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
3UTR GCA 72 bp GCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTaGATACTCCAGAGTCCTAGGTTGGCCCATGAACCA +
Preference number: 3 (lower is better)
Translates to: ATRRPQWTNGQV*ILQSPRLAHEP
Trigger: TGGTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR CCA 72 bp TTTCAGTATGCCTGGGGTGCGACCCGCAGGCCACAATaGACGAATGGCCAAGTCTGCATACTCCAGAGTCCT +
Preference number: 3 (lower is better)
Translates to: FQYAWGATRRPQ*TNGQVCILQSP
Trigger: AGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR CCA 72 bp CTGAGGATGGAGCTGGCTATTCTGGACAGACTGCACTaGGACCTCTATATTGGGACGCCGCTGGACTTCTTG +
Preference number: 3 (lower is better)
Translates to: LRMELAILDRLH*DLYIGTPLDFL
Trigger: CAAGAAGTCCAGCGGCGTCCCAATATAGAGGTCCCAGTGCAGTCTGTCCAGAATAGCCAGCTCCATCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR CAA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACGCTGGACATGGTCTaGTTCATGTTCCAATTCCAT +
Preference number: 3 (lower is better)
Translates to: RGALCIPLGSSSAQHGASTLDMV*FMFQFH
Trigger: ATGGAATTGGAACATGAACAAGACCATGTCCAGCGT...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CAA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCTCAACACTGACATTCTaGGTGGCTTGTAAACCAACA +
Preference number: 3 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCSTLTF*VACKPT
Trigger: TGTTGGTTTACAAGCCACCAAGAATGTCAGTGTTGA...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CAA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACAACGCTGGACATGGTCTaGTTCATGTTCCAATTCCAT +
Preference number: 3 (lower is better)
Translates to: GALCIPLGSSSAQHGASTTLDMV*FMFQFH
Trigger: ATGGAATTGGAACATGAACAAGACCATGTCCAGCGT...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CAA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGATATGCAGGATTTGCTaGGGAGTCTTAATTGGAGTC +
Preference number: 3 (lower is better)
Translates to: WGATRRPQWTNGQVCILQICRIC*GVLIGV
Trigger: GACTCCAATTAAGACTCCCAAGCAAATCCTGCATAT...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR TCA 72 bp AGCACTATGGCTCTGACTATTCCCCGAATGAGCTGCTaGGGATGGAGCTGGCTATTCTGGACAGACTGCACT +
Preference number: 3 (lower is better)
Translates to: STMALTIPRMSC*GWSWLFWTDCT
Trigger: AGTGCAGTCTGTCCAGAATAGCCAGCTCCATCCTCAGCAGCTCATTCGGGGAATAGTCAGAGCCATAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR CCA 72 bp AACTCGTTTGTGCCTTTGGAACAGCTGTTTACAACATaGGATGGCAAAGCACAGGCGTGCACACGCCCTTGC +
Preference number: 3 (lower is better)
Translates to: NSFVPLEQLFTT*DGKAQACTRPC
Trigger: GCAAGGGCGTGTGCACGCCTGTGCTTTGCCATCCCATGTTGTAAACAGCTGTTCCAAAGGCACAAACGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR CAA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAAGCATCAGTTTTCAATaGCAACCAGATACGGACTTA +
Preference number: 3 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSASISFQ*QPDTDL
Trigger: TAAGTCCGTATCTGGTTGCAATTGAAAACTGATGCT...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CAA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACCTCCAGAGTCCTAGGTaGGCCCATGAACCAGGAATT +
Preference number: 3 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNLQSPR*AHEPGI
Trigger: AATTCCTGGTTCATGGGCCAACCTAGGACTCTGGAG...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CAA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACGCACAGACAACAGCTTaGGGCTGCTGTTCCATTTAC +
Preference number: 3 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNAQTTA*GCCSIY
Trigger: GTAAATGGAACAGCAGCCCAAAGCTGTTGTCTGTGC...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CAA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATTCAACACTGACATTCTaGGTGGCTTGTAAACCAACA +
Preference number: 3 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHSTLTF*VACKPT
Trigger: TGTTGGTTTACAAGCCACCAAGAATGTCAGTGTTGA...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CAA 90 bp GGTCATATCAAGAACTCTCCTCTAGTCCAGAACCCATTTTACAGATGGAGATGCTTCCAGTGGTGGCCGTaGAGTGCCCTCTGCCTCCTT +
Preference number: 3 (lower is better)
Translates to: GHIKNSPLVQNPFYRWRCFQWWP*SALCLL
Trigger: AAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAA...GCATCTCCATCTGTAAAATGGGTTCTGGACTAGAGGAGAGTTCTTGATATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
3UTR CCA 72 bp GGATGGGCATTAAGCCTCAAGCCCCTTACGGAGCCATaGATAGGAATGAAAAGGGTTGGGCAACATTTGATG +
Preference number: 3 (lower is better)
Translates to: GWALSLKPLTEP*IGMKRVGQHLM
Trigger: CATCAAATGTTGCCCAACCCTTTTCATTCCTATCCATGGCTCCGTAAGGGGCTTGAGGCTTAATGCCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR CAA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACACGCTGGACATGGTCTaGTTCATGTTCCAATTCCAT +
Preference number: 3 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNTLDMV*FMFQFH
Trigger: ATGGAATTGGAACATGAACAAGACCATGTCCAGCGT...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR TCA 72 bp ATGGACACCGTGAAAGGGCAGTCAGTTTGGCATTTGTaGCGAGCAAAGCAGAGAATTCACCTCAGTTTGTGG +
Preference number: 3 (lower is better)
Translates to: MDTVKGQSVWHL*RAKQRIHLSLW
Trigger: CCACAAACTGAGGTGAATTCTCTGCTTTGCTCGTCACAAATGCCAAACTGACTGCCCTTTCACGGTGTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378706.5
3UTR-3UTR CAA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACTCAACACTGACATTCTaGGTGGCTTGTAAACCAACA +
Preference number: 3 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNSTLTF*VACKPT
Trigger: TGTTGGTTTACAAGCCACCAAGAATGTCAGTGTTGA...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CAA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACAGCATCAGTTTTCAATaGCAACCAGATACGGACTTA +
Preference number: 3 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNSISFQ*QPDTDL
Trigger: TAAGTCCGTATCTGGTTGCAATTGAAAACTGATGCT...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
3UTR-3UTR CAA 90 bp GAGGTGTTTACAGAGTCTACCCTAAACTCGTTTGTGCCTTTGGAACAGCTGTTTAGGGTTGGGCAACATTaGATGTTCCCTGATGGAAAT +
Preference number: 3 (lower is better)
Translates to: EVFTESTLNSFVPLEQLFRVGQH*MFPDGN
Trigger: ATTTCCATCAGGGAACATCAAATGTTGCCCAACCCT...AAACAGCTGTTCCAAAGGCACAAACGAGTTTAGGGTAGACTCTGTAAACACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR CAA 90 bp CAACACAGTTCCACCAGACTCCCACTTCTAAAGGACATTAAATTAACTTTACAAGAGTGGAAGCTCAGCTaGGCCACAGGATGGGCATTA +
Preference number: 3 (lower is better)
Translates to: QHSSTRLPLLKDIKLTLQEWKLS*ATGWAL
Trigger: TAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTC...TTGTAAAGTTAATTTAATGTCCTTTAGAAGTGGGAGTCTGGTGGAACTGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR-3UTR CAA 90 bp GAGGTGTTTACAGAGTCTACCCTAAACTCGTTTGTGCCTTTGGAACAGCTGTTTTTCAGAATGGAAACATaGTCATCTAGGTACTTTCCG +
Preference number: 3 (lower is better)
Translates to: EVFTESTLNSFVPLEQLFFRMET*SSRYFP
Trigger: CGGAAAGTACCTAGATGACAATGTTTCCATTCTGAA...AAACAGCTGTTCCAAAGGCACAAACGAGTTTAGGGTAGACTCTGTAAACACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR GCA 72 bp CTGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTaGAGAGTTTCGTCTTATGATAAGCAGATACAAGTA +
Preference number: 3 (lower is better)
Translates to: LFHYENWPPLPS*RVSSYDKQIQV
Trigger: TACTTGTATCTGCTTATCATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR GCA 72 bp ACTAAAGACTGTTTCATTACGAAAACTGGCCACCGTTaGCAAGTTGCAGAGTTTCGTCTTATGATAAGCAGA +
Preference number: 3 (lower is better)
Translates to: TKDCFITKTGHR*QVAEFRLMISR
Trigger: TCTGCTTATCATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACAGTCTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp TGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCTGCAAGGCCTGCGACTaGAGGGCCTCCACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: CCSQLPVVAVECPLPPSFCKACD*RASTAA
Trigger: GGCTGCGGTGGAGGCCCTGCAGTCGCAGGCCTTGCA...GAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGTGCAAGGCCTGCGACTaGAGGGCCTCCACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQCKACD*RASTAA
Trigger: GGCTGCGGTGGAGGCCCTGCAGTCGCAGGCCTTGCA...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGGTGGCGTGCAAGGCCTaGGACTGCAGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQVACKA*DCRAST
Trigger: GGTGGAGGCCCTGCAGTCGCAGGCCTTGCACGCCAC...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGTGGCGTGCAAGGCCTaGGACTGCAGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSVACKA*DCRAST
Trigger: GGTGGAGGCCCTGCAGTCGCAGGCCTTGCACGCCAC...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCTGCTGCGAGGTGGCGTaGAAGGCCTGCGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCCCEVA*KACDCR
Trigger: CCTGCAGTCGCAGGCCTTGCACGCCACCTCGCAGCA...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTCGCGGCAGCCTAGTCTaGGGGTGTCTTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSRGSLV*GCLGPH
Trigger: GTGGGGCCCAAGACACCCGCAGACTAGGCTGCCGCG...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378699.6
ENST00000448933.5
CDS-3UTR CCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGAGCGCTCCAGGTCGGTaGCCGCCATGGCGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRSAPGR*PPWRAP
Trigger: CGGAGCTCGCCATGGCGGCCACCGACCTGGAGCGCT...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGAGCGCTCCAGGTCGGTaGCCGCCATGGCGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGSAPGR*PPWRAP
Trigger: CGGAGCTCGCCATGGCGGCCACCGACCTGGAGCGCT...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAAGCGCTCCAGGTCGGTaGCCGCCATGGCGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLSAPGR*PPWRAP
Trigger: CGGAGCTCGCCATGGCGGCCACCGACCTGGAGCGCT...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp GCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCTCCAGTGGTGGCCGTTaGGTGCCCTCTGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AAHSFQWWPLSALCLLPSSSGGR*VPSASF
Trigger: GAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGA...GGAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCCCTTCACCTCCTCGGTaGTGCCCACCACGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCPSPPR*CPPRQR
Trigger: CCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGAAGG...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCACTCCCCAGGGGTACTaGCGTGCTCGGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AAHSFQWWPLSALCLLPSTPQGY*RARTSL
Trigger: CAAGCTGGTCCGAGCACGGCAGTACCCCTGGGGAGT...GGAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCACTCCCCAGGGGTACTaGCGTGCTCGGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCTPQGY*RARTSL
Trigger: CAAGCTGGTCCGAGCACGGCAGTACCCCTGGGGAGT...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCTGCCGGCTGTGGGTCTaGTCGCGGAGGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: AAHSFQWWPLSALCLLPSCRLWV*SRRSSM
Trigger: CATGGAAGACCTCCGCGAGCAGACCCACAGCCGGCA...GGAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATGCAAGGCCTGCGACTaGAGGGCCTCCACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTCKACD*RASTAA
Trigger: GGCTGCGGTGGAGGCCCTGCAGTCGCAGGCCTTGCA...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTGCAAGGCCTGCGACTaGAGGGCCTCCACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPCKACD*RASTAA
Trigger: GGCTGCGGTGGAGGCCCTGCAGTCGCAGGCCTTGCA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTATGCAAGGCCTGCGACTaGAGGGCCTCCACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLCKACD*RASTAA
Trigger: GGCTGCGGTGGAGGCCCTGCAGTCGCAGGCCTTGCA...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAGTGGCGTGCAAGGCCTaGGACTGCAGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLVACKA*DCRAST
Trigger: GGTGGAGGCCCTGCAGTCGCAGGCCTTGCACGCCAC...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGGTGGCGTGCAAGGCCTaGGACTGCAGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGVACKA*DCRAST
Trigger: GGTGGAGGCCCTGCAGTCGCAGGCCTTGCACGCCAC...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTTGCTGCGAGGTGGCGTaGAAGGCCTGCGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSCCEVA*KACDCR
Trigger: CCTGCAGTCGCAGGCCTTGCACGCCACCTCGCAGCA...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATTCCTCAGGGGCTGCTaGGAGGTGGCGTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAFLRGC*EVACKA
Trigger: GGCCTTGCACGCCACCTCGCAGCAGCCCCTGAGGAA...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACACCTGGAAACTCCCCTTaGCGGCGGCGGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTPGNSP*RRRREK
Trigger: CTTCTCCCGCCGCCGCCGCCAAGGGGAGTTTCCAGG...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTCCTGGAAACTCCCCTTaGCGGCGGCGGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPPGNSP*RRRREK
Trigger: CTTCTCCCGCCGCCGCCGCCAAGGGGAGTTTCCAGG...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCCTGTCGAAACCCACATaGCCGCCCAGGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCLSKPT*PPRERL
Trigger: GAGCCTCTCCCTGGGCGGCCATGTGGGTTTCGACAG...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTCTGGCCGTGCCTCGGTaGACACACACAGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSLAVPR*THTAHP
Trigger: GGGGTGAGCTGTGTGTGTCCACCGAGGCACGGCCAG...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTCCGGGCGGCTGCGGCTaGATGGATCCAATATGGCCA +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSPGGCG*MDPIWP
Trigger: TGGCCATATTGGATCCATTCAGCCGCAGCCGCCCGG...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTCCGCAGGCGCACGCATaGCTCATGGTGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSPQAHA*LMVTGF
Trigger: GAAGCCAGTCACCATGAGGCATGCGTGCGCCTGCGG...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCACCTTCACCTCCTCGGTaGTGCCCACCACGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAPSPPR*CPPRQR
Trigger: CCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGAAGG...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTCCAGGGGTACTGCCGTaGTCGGACCAGCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSPGVLP*SDQLVP
Trigger: GGGAACAAGCTGGTCCGAGCACGGCAGTACCCCTGG...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTACTCCCCAGGGGTACTaGCGTGCTCGGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSTPQGY*RARTSL
Trigger: CAAGCTGGTCCGAGCACGGCAGTACCCCTGGGGAGT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATGCCGGCTGTGGGTCTaGTCGCGGAGGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSACRLWV*SRRSSM
Trigger: CATGGAAGACCTCCGCGAGCAGACCCACAGCCGGCA...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGTGCCGGCTGTGGGTCTaGTCGCGGAGGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQCRLWV*SRRSSM
Trigger: CATGGAAGACCTCCGCGAGCAGACCCACAGCCGGCA...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATGTGGCGTGCAAGGCCTaGGACTGCAGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHVACKA*DCRAST
Trigger: GGTGGAGGCCCTGCAGTCGCAGGCCTTGCACGCCAC...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTGCTGCGAGGTGGCGTaGAAGGCCTGCGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRCCEVA*KACDCR
Trigger: CCTGCAGTCGCAGGCCTTGCACGCCACCTCGCAGCA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGTGCTGCGAGGTGGCGTaGAAGGCCTGCGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGCCEVA*KACDCR
Trigger: CCTGCAGTCGCAGGCCTTGCACGCCACCTCGCAGCA...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGTTCCTCAGGGGCTGCTaGGAGGTGGCGTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGFLRGC*EVACKA
Trigger: GGCCTTGCACGCCACCTCGCAGCAGCCCCTGAGGAA...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTATTCCTCAGGGGCTGCTaGGAGGTGGCGTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLFLRGC*EVACKA
Trigger: GGCCTTGCACGCCACCTCGCAGCAGCCCCTGAGGAA...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTTCCTCAGGGGCTGCTaGGAGGTGGCGTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRFLRGC*EVACKA
Trigger: GGCCTTGCACGCCACCTCGCAGCAGCCCCTGAGGAA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTTCCTCAGGGGCTGCTaGGAGGTGGCGTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: QMEMLRPCCSQLPVVAVEFLRGC*EVACKA
Trigger: GGCCTTGCACGCCACCTCGCAGCAGCCCCTGAGGAA...CTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTTCCTCAGGGGCTGCTaGGAGGTGGCGTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPFLRGC*EVACKA
Trigger: GGCCTTGCACGCCACCTCGCAGCAGCCCCTGAGGAA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTTCCTTCCTCAGGGGCTaGTGCGAGGTGGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: EMLRPCCSQLPVVAVECPSFLRG*CEVACK
Trigger: CTTGCACGCCACCTCGCAGCAGCCCCTGAGGAAGGA...AGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGTCCTTCCTCAGGGGCTaGTGCGAGGTGGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQSFLRG*CEVACK
Trigger: CTTGCACGCCACCTCGCAGCAGCCCCTGAGGAAGGA...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGGCCTCTTCCTGGCCGTaGCTCGGTGGACACACACAG +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQASSWP*LGGHTQ
Trigger: CTGTGTGTGTCCACCGAGGCACGGCCAGGAAGAGGC...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGAGGCTCCGGGGCTCTaGCTCTGCATTCGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSEAPGL*LCIREA
Trigger: CGCTTCTCGAATGCAGAGCCAGAGCCCCGGAGCCTC...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCACTGTCGAAACCCACATaGCCGCCCAGGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RGALCIPLGSSSAQHGASLSKPT*PPRERL
Trigger: GAGCCTCTCCCTGGGCGGCCATGTGGGTTTCGACAG...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCTGGCCGTGCCTCGGTaGACACACACAGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGLAVPR*THTAHP
Trigger: GGGGTGAGCTGTGTGTGTCCACCGAGGCACGGCCAG...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGCTGGCCGTGCCTCGGTaGACACACACAGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGLAVPR*THTAHP
Trigger: GGGGTGAGCTGTGTGTGTCCACCGAGGCACGGCCAG...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACACTGGCCGTGCCTCGGTaGACACACACAGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTLAVPR*THTAHP
Trigger: GGGGTGAGCTGTGTGTGTCCACCGAGGCACGGCCAG...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCTGCAGTGAGGCTTGCTaGAGGGACCTGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCCSEAC*RDLWRQ
Trigger: CTGCCTCCACAGGTCCCTCCAGCAAGCCTCACTGCA...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTAGTCTGCGGGTGTCTTaGGCCCCACCTGATGCTCCG +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSSLRVS*APPDAP
Trigger: CGGAGCATCAGGTGGGGCCCAAGACACCCGCAGACT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378699.6
ENST00000448933.5
CDS-3UTR CCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAAGTCTGCGGGTGTCTTaGGCCCCACCTGATGCTCCG +
Preference number: 4 (lower is better)
Translates to: RGALCIPLGSSSAQHGASSLRVS*APPDAP
Trigger: CGGAGCATCAGGTGGGGCCCAAGACACCCGCAGACT...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448933.5
CDS-3UTR CCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCGAGGCTCCGGGGCTCTaGCTCTGCATTCAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCEAPGL*LCIQSV
Trigger: CACACTCTGAATGCAGAGCCAGAGCCCCGGAGCCTC...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448933.5
CDS-3UTR TCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCGGGCGGCTGCGGCTaGATGGATCCAATATGGCCA +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGPGGCG*MDPIWP
Trigger: TGGCCATATTGGATCCATTCAGCCGCAGCCGCCCGG...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTCCGGGCGGCTGCGGCTaGATGGATCCAATATGGCCA +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPPGGCG*MDPIWP
Trigger: TGGCCATATTGGATCCATTCAGCCGCAGCCGCCCGG...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCAGCCTTCCGGCGATTaGAGGCGTTGGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CCSQLPVVAVECPLPPSFQPSGD*RRWSPP
Trigger: AGGAGGAGACCAACGCCTTCAATCGCCGGAAGGCTG...GAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACACCGCAGGCGCACGCATaGCTCATGGTGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTPQAHA*LMVTGF
Trigger: GAAGCCAGTCACCATGAGGCATGCGTGCGCCTGCGG...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTACCGCAGGCGCACGCATaGCTCATGGTGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLPQAHA*LMVTGF
Trigger: GAAGCCAGTCACCATGAGGCATGCGTGCGCCTGCGG...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTCCGCAGGCGCACGCATaGCTCATGGTGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPPQAHA*LMVTGF
Trigger: GAAGCCAGTCACCATGAGGCATGCGTGCGCCTGCGG...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCGCAGGCGCACGCATaGCTCATGGTGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGPQAHA*LMVTGF
Trigger: GAAGCCAGTCACCATGAGGCATGCGTGCGCCTGCGG...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATCACCTCCTCGGTGCTaGCCACCACGGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTSPPRC*PPRQRA
Trigger: TGCCCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGA...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTCACCTCCTCGGTGCTaGCCACCACGGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRSPPRC*PPRQRA
Trigger: TGCCCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCACCTCCTCGGTGCTaGCCACCACGGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPSPPRC*PPRQRA
Trigger: TGCCCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTCACCTCCTCGGTGCTaGCCACCACGGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: QMEMLRPCCSQLPVVAVESPPRC*PPRQRA
Trigger: TGCCCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGA...CTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTCCTTCACCTCCTCGGTaGTGCCCACCACGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPPSPPR*CPPRQR
Trigger: CCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGAAGG...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTACCTTCACCTCCTCGGTaGTGCCCACCACGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLPSPPR*CPPRQR
Trigger: CCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGAAGG...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCCTTCACCTCCTCGGTaGTGCCCACCACGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRPSPPR*CPPRQR
Trigger: CCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGAAGG...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGCCTTCACCTCCTCGGTaGTGCCCACCACGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QMEMLRPCCSQLPVVAVEPSPPR*CPPRQR
Trigger: CCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGAAGG...CTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCAGGGGTACTGCCGTaGTCGGACCAGCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGPGVLP*SDQLVP
Trigger: GGGAACAAGCTGGTCCGAGCACGGCAGTACCCCTGG...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTACCAGGGGTACTGCCGTaGTCGGACCAGCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLPGVLP*SDQLVP
Trigger: GGGAACAAGCTGGTCCGAGCACGGCAGTACCCCTGG...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGCCAGGGGTACTGCCGTaGTCGGACCAGCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: QMEMLRPCCSQLPVVAVEPGVLP*SDQLVP
Trigger: GGGAACAAGCTGGTCCGAGCACGGCAGTACCCCTGG...CTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGACTCCCCAGGGGTACTaGCGTGCTCGGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRTPQGY*RARTSL
Trigger: CAAGCTGGTCCGAGCACGGCAGTACCCCTGGGGAGT...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGACTCCCCAGGGGTACTaGCGTGCTCGGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGTPQGY*RARTSL
Trigger: CAAGCTGGTCCGAGCACGGCAGTACCCCTGGGGAGT...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTATGCCGGCTGTGGGTCTaGTCGCGGAGGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLCRLWV*SRRSSM
Trigger: CATGGAAGACCTCCGCGAGCAGACCCACAGCCGGCA...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTGCCGGCTGTGGGTCTaGTCGCGGAGGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRCRLWV*SRRSSM
Trigger: CATGGAAGACCTCCGCGAGCAGACCCACAGCCGGCA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp AATGAGCTGCTGAGGATGGAGCTGGCTATTCTGGACAGACTGCACTGGGACCTCTGCAAGGCCTGCGACTaGAGGGCCTCCACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: NELLRMELAILDRLHWDLCKACD*RASTAA
Trigger: GGCTGCGGTGGAGGCCCTGCAGTCGCAGGCCTTGCA...GAGGTCCCAGTGCAGTCTGTCCAGAATAGCCAGCTCCATCCTCAGCAGCTCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAGTGGCGTGCAAGGCCTaGGACTGCAGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVVACKA*DCRAST
Trigger: GGTGGAGGCCCTGCAGTCGCAGGCCTTGCACGCCAC...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TTACAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGTGGCGTGCAAGGCCTaGGACTGCAGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LQMEMLRPCCSQLPVVAVVACKA*DCRAST
Trigger: GGTGGAGGCCCTGCAGTCGCAGGCCTTGCACGCCAC...AACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTATCCTTCCTCAGGGGCTaGTGCGAGGTGGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLSFLRG*CEVACK
Trigger: CTTGCACGCCACCTCGCAGCAGCCCCTGAGGAAGGA...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCCTTCCTCAGGGGCTaGTGCGAGGTGGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPSFLRG*CEVACK
Trigger: CTTGCACGCCACCTCGCAGCAGCCCCTGAGGAAGGA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGTCCTTCCTCAGGGGCTaGTGCGAGGTGGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGSFLRG*CEVACK
Trigger: CTTGCACGCCACCTCGCAGCAGCCCCTGAGGAAGGA...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTCCTTCCTCAGGGGCTaGTGCGAGGTGGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRSFLRG*CEVACK
Trigger: CTTGCACGCCACCTCGCAGCAGCCCCTGAGGAAGGA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAGCCTCTTCCTGGCCGTaGCTCGGTGGACACACACAG +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLASSWP*LGGHTQ
Trigger: CTGTGTGTGTCCACCGAGGCACGGCCAGGAAGAGGC...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACAGCCTCTTCCTGGCCGTaGCTCGGTGGACACACACAG +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTASSWP*LGGHTQ
Trigger: CTGTGTGTGTCCACCGAGGCACGGCCAGGAAGAGGC...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCCTCACAGGTAAAGGCTaGCTCTTCCTGGCCGTGCCT +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCLTGKG*LFLAVP
Trigger: AGGCACGGCCAGGAAGAGGCAGCCTTTACCTGTGAG...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTTCAGTATGCCTGGGGTaGGACCCGCAGGCCACAATG +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSSVCLG*DPQATM
Trigger: CATTGTGGCCTGCGGGTCGCACCCCAGGCATACTGA...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCATCAGTATGCCTGGGGTaGGACCCGCAGGCCACAATG +
Preference number: 4 (lower is better)
Translates to: RGALCIPLGSSSAQHGASSVCLG*DPQATM
Trigger: CATTGTGGCCTGCGGGTCGCACCCCAGGCATACTGA...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTAGGTGCAGTGAGGCTTaGTGGAGGGACCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSRCSEA*WRDLWR
Trigger: CCTCCACAGGTCCCTCCAGCAAGCCTCACTGCACCT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTGTGGTGGCCGTTGAGTaGCCTCTGCCTCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: EMLRPCCSQLPVVAVECPVVAVE*PLPPSF
Trigger: GAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCAC...AGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTACGCGGCAGCCTAGTCTaGGGGTGTCTTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVRGSLV*GCLGPH
Trigger: GTGGGGCCCAAGACACCCGCAGACTAGGCTGCCGCG...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378699.6
ENST00000448933.5
CDS-3UTR CCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTGAGGCTCCGGGGCTCTaGCTCTGCATTCGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPEAPGL*LCIREA
Trigger: CGCTTCTCGAATGCAGAGCCAGAGCCCCGGAGCCTC...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGGAGGCTCCGGGGCTCTaGCTCTGCATTCGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGEAPGL*LCIREA
Trigger: CGCTTCTCGAATGCAGAGCCAGAGCCCCGGAGCCTC...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CCA 90 bp CAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGGAGGCTCCGGGGCTCTaGCTCTGCATTCGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: QMEMLRPCCSQLPVVAVEEAPGL*LCIREA
Trigger: CGCTTCTCGAATGCAGAGCCAGAGCCCCGGAGCCTC...CTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAGAGGCTCCGGGGCTCTaGCTCTGCATTCGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLEAPGL*LCIREA
Trigger: CGCTTCTCGAATGCAGAGCCAGAGCCCCGGAGCCTC...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACACTGTCGAAACCCACATaGCCGCCCAGGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTLSKPT*PPRERL
Trigger: GAGCCTCTCCCTGGGCGGCCATGTGGGTTTCGACAG...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGTCGAAACCCACATaGCCGCCCAGGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRLSKPT*PPRERL
Trigger: GAGCCTCTCCCTGGGCGGCCATGTGGGTTTCGACAG...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTACTGTCGAAACCCACATaGCCGCCCAGGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLLSKPT*PPRERL
Trigger: GAGCCTCTCCCTGGGCGGCCATGTGGGTTTCGACAG...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCTGTAGGCTGAAGGGCTaGCTGTCACCATCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCCRLKG*LSPSLS
Trigger: GGACAGCGATGGTGACAGCCAGCCCTTCAGCCTACA...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACAAAGGCTGCCTCTTCCTaGCCGTGCCTCGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTKAASS*PCLGGH
Trigger: GTGTCCACCGAGGCACGGCCAGGAAGAGGCAGCCTT...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGAAGGCTGCCTCTTCCTaGCCGTGCCTCGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGKAASS*PCLGGH
Trigger: GTGTCCACCGAGGCACGGCCAGGAAGAGGCAGCCTT...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGGCCTTTCAGTATGCCTaGGGTGCGACCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGAFQYA*GATRRP
Trigger: TGGCCTGCGGGTCGCACCCCAGGCATACTGAAAGGC...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGGCCTTTCAGTATGCCTaGGGTGCGACCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRAFQYA*GATRRP
Trigger: TGGCCTGCGGGTCGCACCCCAGGCATACTGAAAGGC...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACAGCCTTTCAGTATGCCTaGGGTGCGACCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTAFQYA*GATRRP
Trigger: TGGCCTGCGGGTCGCACCCCAGGCATACTGAAAGGC...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATGCAGTGAGGCTTGCTaGAGGGACCTGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSACSEAC*RDLWRQ
Trigger: CTGCCTCCACAGGTCCCTCCAGCAAGCCTCACTGCA...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCACAGCTTCCAGTGGTaGCCGTTGAGTGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CCSQLPVVAVECPLPPSFHSFQW*PLSALC
Trigger: GCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTG...GAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR TCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTACAGCCTTCCGGCGATTaGAGGCGTTGGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLQPSGD*RRWSPP
Trigger: AGGAGGAGACCAACGCCTTCAATCGCCGGAAGGCTG...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCAGCCTTCCGGCGATTaGAGGCGTTGGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGQPSGD*RRWSPP
Trigger: AGGAGGAGACCAACGCCTTCAATCGCCGGAAGGCTG...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTCAGCCTTCCGGCGATTaGAGGCGTTGGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPQPSGD*RRWSPP
Trigger: AGGAGGAGACCAACGCCTTCAATCGCCGGAAGGCTG...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCAGCCTTCCGGCGATTaGAGGCGTTGGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRQPSGD*RRWSPP
Trigger: AGGAGGAGACCAACGCCTTCAATCGCCGGAAGGCTG...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGGCCTGTAAAGGCAGCTaGCCCCTTCTCCAGACACGG +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGACKGS*PLLQTR
Trigger: CCGTGTCTGGAGAAGGGGTCAGCTGCCTTTACAGGC...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620483.4
CDS-3UTR GCA 90 bp GCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCATGGTCAGCTTGAGCTaGACGTTGCTCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AAHSFQWWPLSALCLLPSMVSLS*TLLSWR
Trigger: CCTCCAGGAGAGCAACGTGCAGCTCAAGCTGACCAT...GGAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATTCACCTCCTCGGTGCTaGCCACCACGGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHSPPRC*PPRQRA
Trigger: TGCCCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGA...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCTTCTCATTCTCCACCTaGACCACTCCCCAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCFSFST*TTPQGY
Trigger: GTACCCCTGGGGAGTGGTGCAGGTGGAGAATGAGAA...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TTTTTGGTCCCGGAGTGGAAGCTCAGCTTGGCCACAGGATGGGCATTAAGCCTCTGCTGCGAGGTGGCGTaGAAGGCCTGCGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: FLVPEWKLSLATGWALSLCCEVA*KACDCR
Trigger: CCTGCAGTCGCAGGCCTTGCACGCCACCTCGCAGCA...GAGGCTTAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTATGCTGCGAGGTGGCGTaGAAGGCCTGCGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVCCEVA*KACDCR
Trigger: CCTGCAGTCGCAGGCCTTGCACGCCACCTCGCAGCA...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTATTCCTCAGGGGCTGCTaGGAGGTGGCGTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVFLRGC*EVACKA
Trigger: GGCCTTGCACGCCACCTCGCAGCAGCCCCTGAGGAA...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTCTCACAGGTAAAGGCTaGCTCTTCCTGGCCGTGCCT +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSLTGKG*LFLAVP
Trigger: AGGCACGGCCAGGAAGAGGCAGCCTTTACCTGTGAG...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCACTCACAGGTAAAGGCTaGCTCTTCCTGGCCGTGCCT +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSALTGKG*LFLAVP
Trigger: AGGCACGGCCAGGAAGAGGCAGCCTTTACCTGTGAG...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTCAGTATGCCTGGGGTaGGACCCGCAGGCCACAATG +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRSVCLG*DPQATM
Trigger: CATTGTGGCCTGCGGGTCGCACCCCAGGCATACTGA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGAGGTGCAGTGAGGCTTaGTGGAGGGACCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGRCSEA*WRDLWR
Trigger: CCTCCACAGGTCCCTCCAGCAAGCCTCACTGCACCT...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCGAGATGCTGAGGCCATaGTGCTCACAGCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: AAHSFQWWPLSALCLLPSEMLRP*CSQLPV
Trigger: CACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTC...GGAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGCCTTCGGCTCCTTGTaGAACCAACGAGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSAFGSL*NQRAGC
Trigger: GCATCCTGCTCGTTGGTTGCACAAGGAGCCGAAGGC...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378699.6
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGAGAGTGTGGACAAGCTaGGGGAGACCCGTCGGATCC +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRRVWTS*GRPVGS
Trigger: GGATCCGACGGGTCTCCCGCAGCTTGTCCACACTCT...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378699.6
ENST00000448933.5
CDS-3UTR GCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACAAGAGTGTGGACAAGCTaGGGGAGACCCGTCGGATCC +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTRVWTS*GRPVGS
Trigger: GGATCCGACGGGTCTCCCGCAGCTTGTCCACACTCT...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448933.5
CDS-3UTR CCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACAGCGCTCCAGGTCGGTaGCCGCCATGGCGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNSAPGR*PPWRAP
Trigger: CGGAGCTCGCCATGGCGGCCACCGACCTGGAGCGCT...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATGAGGCTCCGGGGCTCTaGCTCTGCATTCGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHEAPGL*LCIREA
Trigger: CGCTTCTCGAATGCAGAGCCAGAGCCCCGGAGCCTC...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCATGTAGGCTGAAGGGCTaGCTGTCACCATCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RGALCIPLGSSSAQHGASCRLKG*LSPSLS
Trigger: GGACAGCGATGGTGACAGCCAGCCCTTCAGCCTACA...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp ATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGTGTAGGCTGAAGGGCTaGCTGTCACCATCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: MLRPCCSQLPVVAVECPLCRLKG*LSPSLS
Trigger: GGACAGCGATGGTGACAGCCAGCCCTTCAGCCTACA...CAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCTCTGCTGCTGGAGCATaGAGCCCCTCACAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCSAAGA*SPSQVK
Trigger: CTTTACCTGTGAGGGGCTCCATGCTCCAGCAGCAGA...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCAGCCAGCCACGAGTATaGCCTTTCAGTATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCSQPRV*PFSMPG
Trigger: CCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCT...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTGAGGCTCCGGGGCTCTaGCTCTGCATTCAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPEAPGL*LCIQSV
Trigger: CACACTCTGAATGCAGAGCCAGAGCCCCGGAGCCTC...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378699.6
ENST00000448933.5
CDS-3UTR TCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTCCACAATGGTCAGCTTaGGCTGCACGTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSPQWSA*AARCSP
Trigger: AGGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGG...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCCACAATGGTCAGCTTaGGCTGCACGTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: CCSQLPVVAVECPLPPSFPQWSA*AARCSP
Trigger: AGGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGG...GAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR TCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGCCACAATGGTCAGCTTaGGCTGCACGTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQPQWSA*AARCSP
Trigger: AGGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGG...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCATGTCTCTTGTAGGCTaGAGGGCTGGCTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: AAHSFQWWPLSALCLLPSMSLVG*RAGCHH
Trigger: ATGGTGACAGCCAGCCCTTCAGCCTACAAGAGACAT...GGAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTACCGCAGGCGCACGCATaGCTCATGGTGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVPQAHA*LMVTGF
Trigger: GAAGCCAGTCACCATGAGGCATGCGTGCGCCTGCGG...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TTACAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTCCGCAGGCGCACGCATaGCTCATGGTGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LQMEMLRPCCSQLPVVAVPQAHA*LMVTGF
Trigger: GAAGCCAGTCACCATGAGGCATGCGTGCGCCTGCGG...AACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTGTAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTATGGTCAGCTTGAGCTaGACGTTGCTCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSMVSLS*TLLSWR
Trigger: CCTCCAGGAGAGCAACGTGCAGCTCAAGCTGACCAT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTAGAGACTTCAGGGAGTaGCCTGTGGGCGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSRDFRE*PVGVMK
Trigger: CTTCATCACGCCCACAGGGCACTCCCTGAAGTCTCT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTACCAGGGGTACTGCCGTaGTCGGACCAGCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVPGVLP*SDQLVP
Trigger: GGGAACAAGCTGGTCCGAGCACGGCAGTACCCCTGG...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTATCCTTCCTCAGGGGCTaGTGCGAGGTGGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVSFLRG*CEVACK
Trigger: CTTGCACGCCACCTCGCAGCAGCCCCTGAGGAAGGA...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGGGCACCACGTGAGTTaGCATCTCCACGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSGHHVS*HLHAEQ
Trigger: TTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCATTGAGGGGAGCGTTGTaGATTCCTCTGGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: RGALCIPLGSSSAQHGASLRGAL*IPLGSS
Trigger: GGAGCTACCCAGAGGAATGCACAACGCTCCCCTCAA...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTATGGCCTTTCAGTATaGCTGGGGTGCGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRYGLSV*LGCDPQ
Trigger: CTGCGGGTCGCACCCCAGGCATACTGAAAGGCCATA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp ATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCGTTGAGTGCCCTCTaGCTCCTTCCTTCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: MLRPCCSQLPVVAVECPLPLSAL*LLPSSV
Trigger: TACACTGGAAGGAAGGAGGCAGAGGGCACTCAACGG...CAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp ATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGATGCTGAGGCCATGCTaGTCACAGCTTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: MLRPCCSQLPVVAVECPLMLRPC*SQLPVV
Trigger: CACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCAT...CAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACCCTGGAAACTCCCCTTaGCGGCGGCGGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNPGNSP*RRRREK
Trigger: CTTCTCCCGCCGCCGCCGCCAAGGGGAGTTTCCAGG...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGAATATGGCCACTTCCTaGAAACTCCCCTTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQNMATS*KLPLAA
Trigger: CGCCGCCAAGGGGAGTTTCCAGGAAGTGGCCATATT...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAGCGGCTGCGGCTGAATaGATCCAATATGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: RGALCIPLGSSSAQHGASAAAAE*IQYGHF
Trigger: GAAGTGGCCATATTGGATCCATTCAGCCGCAGCCGC...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TTACAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTCTGTCGAAACCCACATaGCCGCCCAGGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LQMEMLRPCCSQLPVVAVLSKPT*PPRERL
Trigger: GAGCCTCTCCCTGGGCGGCCATGTGGGTTTCGACAG...AACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCATGCCTCATGGTGACTaGCTTCCTCAGTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCMPHGD*LPQSRR
Trigger: CCTTCGAGACTGAGGAAGCCAGTCACCATGAGGCAT...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGTGTAGGCTGAAGGGCTaGCTGTCACCATCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGCRLKG*LSPSLS
Trigger: GGACAGCGATGGTGACAGCCAGCCCTTCAGCCTACA...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTGTAGGCTGAAGGGCTaGCTGTCACCATCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRCRLKG*LSPSLS
Trigger: GGACAGCGATGGTGACAGCCAGCCCTTCAGCCTACA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTATGTAGGCTGAAGGGCTaGCTGTCACCATCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLCRLKG*LSPSLS
Trigger: GGACAGCGATGGTGACAGCCAGCCCTTCAGCCTACA...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATCTGCTGCTGGAGCATaGAGCCCCTCACAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSASAAGA*SPSQVK
Trigger: CTTTACCTGTGAGGGGCTCCATGCTCCAGCAGCAGA...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAACCCGCAGGCCACAATaGACGAATGGCCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLTRRPQ*TNGQVC
Trigger: GCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGT...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAGCCTTTCAGTATGCCTaGGGTGCGACCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVAFQYA*GATRRP
Trigger: TGGCCTGCGGGTCGCACCCCAGGCATACTGAAAGGC...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTAGCCAGCCACGAGTATaGCCTTTCAGTATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSSQPRV*PFSMPG
Trigger: CCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTTCTGCATTCAGAGTGTaGACAAGCTGCGGGAGACCC +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSSAFRV*TSCGRP
Trigger: GGGTCTCCCGCAGCTTGTCCACACTCTGAATGCAGA...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378699.6
ENST00000448933.5
CDS-3UTR TCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATTGAAGCTGAAGCCCTaGGTGACCGACTTGCTGACC +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTLKLKP*VTDLLT
Trigger: GGTCAGCAAGTCGGTCACTCAGGGCTTCAGCTTCAA...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTTGAAGCTGAAGCCCTaGGTGACCGACTTGCTGACC +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRLKLKP*VTDLLT
Trigger: GGTCAGCAAGTCGGTCACTCAGGGCTTCAGCTTCAA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTCCACAATGGTCAGCTTaGGCTGCACGTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPPQWSA*AARCSP
Trigger: AGGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGG...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACACCACAATGGTCAGCTTaGGCTGCACGTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTPQWSA*AARCSP
Trigger: AGGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGG...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCTTCACGAAGTCGCAGTaGTTCTCATTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCFTKSQ*FSFSTC
Trigger: GCAGGTGGAGAATGAGAATCACTGCGACTTCGTGAA...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAATGTCTCTTGTAGGCTaGAGGGCTGGCTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAMSLVG*RAGCHH
Trigger: ATGGTGACAGCCAGCCCTTCAGCCTACAAGAGACAT...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTATTAGCACGTCTTCCTaGGGCTTCCAGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPISTSS*GFQPGS
Trigger: ACTCCCTGGCTGGAAGCCTCAGGAAGACGTGCTAAT...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTAGGGGGAAATGGTCATaGGAAGGAAGACAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSRGKWS*EGRQGH
Trigger: ATGCCCCTGTCTTCCTTCTCATGACCATTTCCCCCT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAAGGGGGAAATGGTCATaGGAAGGAAGACAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSARGKWS*EGRQGH
Trigger: ATGCCCCTGTCTTCCTTCTCATGACCATTTCCCCCT...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp AACATTAAAAACCATGGTCTCCAGTTCCATGCCCTGGTGGTCCTGAGCTGGCCCATGCCCTGGTGGTCCTaGGCTGGCCCCATGTGTTGG +
Preference number: 4 (lower is better)
Translates to: NIKNHGLQFHALVVLSWPMPWWS*AGPMCW
Trigger: CCAACACATGGGGCCAGCTCAGGACCACCAGGGCAT...GGGCCAGCTCAGGACCACCAGGGCATGGAACTGGAGACCATGGTTTTTAATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp CAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTACAGATGGAGATGCTaGGGCCATGCTGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: QMEMLRPCCSQLPVVAVEYRWRC*GHAAHS
Trigger: GCTGTGAGCAGCATGGCCTCAGCATCTCCATCTGTA...CTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGTCATCAGTGTGGATTTaGCAATGCCGGTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQSSVWI*QCRSPP
Trigger: TGGGGGAGACCGGCATTGGCAAATCCACACTGATGA...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTATGGTCAGCTTGAGCTaGACGTTGCTCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPMVSLS*TLLSWR
Trigger: CCTCCAGGAGAGCAACGTGCAGCTCAAGCTGACCAT...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGATGGTCAGCTTGAGCTaGACGTTGCTCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRMVSLS*TLLSWR
Trigger: CCTCCAGGAGAGCAACGTGCAGCTCAAGCTGACCAT...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAAGAGACTTCAGGGAGTaGCCTGTGGGCGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLRDFRE*PVGVMK
Trigger: CTTCATCACGCCCACAGGGCACTCCCTGAAGTCTCT...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTAGAGACTTCAGGGAGTaGCCTGTGGGCGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPRDFRE*PVGVMK
Trigger: CTTCATCACGCCCACAGGGCACTCCCTGAAGTCTCT...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGTTCTCATTCTCCACCTaGACCACTCCCCAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGFSFST*TTPQGY
Trigger: GTACCCCTGGGGAGTGGTGCAGGTGGAGAATGAGAA...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTTCTCATTCTCCACCTaGACCACTCCCCAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPFSFST*TTPQGY
Trigger: GTACCCCTGGGGAGTGGTGCAGGTGGAGAATGAGAA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTATTCTCATTCTCCACCTaGACCACTCCCCAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLFSFST*TTPQGY
Trigger: GTACCCCTGGGGAGTGGTGCAGGTGGAGAATGAGAA...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGGGGCACCACGTGAGTTaGCATCTCCACGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRGHHVS*HLHAEQ
Trigger: TTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGGGGCACCACGTGAGTTaGCATCTCCACGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGGHHVS*HLHAEQ
Trigger: TTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTTGAGGGGAGCGTTGTaGATTCCTCTGGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPLRGAL*IPLGSS
Trigger: GGAGCTACCCAGAGGAATGCACAACGCTCCCCTCAA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTTGAGGGGAGCGTTGTaGATTCCTCTGGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRLRGAL*IPLGSS
Trigger: GGAGCTACCCAGAGGAATGCACAACGCTCCCCTCAA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATCTCACAGGTAAAGGCTaGCTCTTCCTGGCCGTGCCT +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHLTGKG*LFLAVP
Trigger: AGGCACGGCCAGGAAGAGGCAGCCTTTACCTGTGAG...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCACGAATGGCCAAGTCTaGATACTCCAGAGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCTNGQV*ILQSPR
Trigger: CCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGT...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAAGGTGCAGTGAGGCTTaGTGGAGGGACCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVRCSEA*WRDLWR
Trigger: CCTCCACAGGTCCCTCCAGCAAGCCTCACTGCACCT...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGGCGGCTGCGGCTGAATaGATCCAATATGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRAAAAE*IQYGHF
Trigger: GAAGTGGCCATATTGGATCCATTCAGCCGCAGCCGC...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTGCGGCTGCGGCTGAATaGATCCAATATGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPAAAAE*IQYGHF
Trigger: GAAGTGGCCATATTGGATCCATTCAGCCGCAGCCGC...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTATGCCTCATGGTGACTaGCTTCCTCAGTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSMPHGD*LPQSRR
Trigger: CCTTCGAGACTGAGGAAGCCAGTCACCATGAGGCAT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGCAAGGCTGTAAACACTaGAGTCTGTACCGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQQGCKH*SLYRLP
Trigger: TGGGAGCCGGTACAGACTCCAGTGTTTACAGCCTTG...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCACAAGGCTGTAAACACTaGAGTCTGTACCGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAQGCKH*SLYRLP
Trigger: TGGGAGCCGGTACAGACTCCAGTGTTTACAGCCTTG...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTCAAGGCTGTAAACACTaGAGTCTGTACCGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSQGCKH*SLYRLP
Trigger: TGGGAGCCGGTACAGACTCCAGTGTTTACAGCCTTG...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGTCTGCTGCTGGAGCATaGAGCCCCTCACAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGSAAGA*SPSQVK
Trigger: CTTTACCTGTGAGGGGCTCCATGCTCCAGCAGCAGA...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCGCCACAATGGACGAATaGCCAAGTCTGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCATMDE*PSLHTP
Trigger: TGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGC...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATACCCGCAGGCCACAATaGACGAATGGCCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHTRRPQ*TNGQVC
Trigger: GCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGT...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGAGCCAGCCACGAGTATaGCCTTTCAGTATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGSQPRV*PFSMPG
Trigger: CCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCT...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGAGCCAGCCACGAGTATaGCCTTTCAGTATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGSQPRV*PFSMPG
Trigger: CCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCT...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCTGCATTCAGAGTGTaGACAAGCTGCGGGAGACCC +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPSAFRV*TSCGRP
Trigger: GGGTCTCCCGCAGCTTGTCCACACTCTGAATGCAGA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378699.6
ENST00000448933.5
CDS-3UTR TCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTTTCACGAAGTCGCAGTaGTTCTCATTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSFTKSQ*FSFSTC
Trigger: GCAGGTGGAGAATGAGAATCACTGCGACTTCGTGAA...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCTTCACGAAGTCGCAGTaGTTCTCATTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: CCSQLPVVAVECPLPPSFFTKSQ*FSFSTC
Trigger: GCAGGTGGAGAATGAGAATCACTGCGACTTCGTGAA...GAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR TCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATTCACGAAGTCGCAGTaGTTCTCATTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAFTKSQ*FSFSTC
Trigger: GCAGGTGGAGAATGAGAATCACTGCGACTTCGTGAA...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCATTCACGAAGTCGCAGTaGTTCTCATTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: RGALCIPLGSSSAQHGASFTKSQ*FSFSTC
Trigger: GCAGGTGGAGAATGAGAATCACTGCGACTTCGTGAA...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGATGTCTCTTGTAGGCTaGAGGGCTGGCTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRMSLVG*RAGCHH
Trigger: ATGGTGACAGCCAGCCCTTCAGCCTACAAGAGACAT...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGATGTCTCTTGTAGGCTaGAGGGCTGGCTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGMSLVG*RAGCHH
Trigger: ATGGTGACAGCCAGCCCTTCAGCCTACAAGAGACAT...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp AACATTAAAAACCATGGTCTCCAGTTCCATGCCCTGGTGGTCCTGAGCTGGCCCCAGCCTTCCGGCGATTaGAGGCGTTGGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NIKNHGLQFHALVVLSWPQPSGD*RRWSPP
Trigger: AGGAGGAGACCAACGCCTTCAATCGCCGGAAGGCTG...GGGCCAGCTCAGGACCACCAGGGCATGGAACTGGAGACCATGGTTTTTAATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGTTGCCATCTCCACGCTaGACAATTAGGCCTAGCATC +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQLPSPR*TIRPSI
Trigger: GATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAA...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAAGGGGGAAATGGTCATaGGAAGGAAGACAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLRGKWS*EGRQGH
Trigger: ATGCCCCTGTCTTCCTTCTCATGACCATTTCCCCCT...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGTCTGTCAAGTGTCCTaGAGATCCTGGGAAGGCTTA +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSVCQVS*RSWEGL
Trigger: TAAGCCTTCCCAGGATCTTCAGGACACTTGACAGAC...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATGCAAGATGGACACCGTaGAAGGGCAGTCAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHARWTP*KGSQFG
Trigger: GCCAAACTGACTGCCCTTTCACGGTGTCCATCTTGC...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR TCA 90 bp TTTTTGGTCCCGGAGTGGAAGCTCAGCTTGGCCACAGGATGGGCATTAAGCCTCGCACATGCACCACAGTaGGGTGACGCACAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: FLVPEWKLSLATGWALSLAHAPQ*GDAQGS
Trigger: TGAGCCTTGTGCGTCACCTCACTGTGGTGCATGTGC...GAGGCTTAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGTCATCAGTGTGGATTTaGCAATGCCGGTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGSSVWI*QCRSPP
Trigger: TGGGGGAGACCGGCATTGGCAAATCCACACTGATGA...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCATCAGTGTGGATTTaGCAATGCCGGTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPSSVWI*QCRSPP
Trigger: TGGGGGAGACCGGCATTGGCAAATCCACACTGATGA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTCATCAGTGTGGATTTaGCAATGCCGGTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QMEMLRPCCSQLPVVAVESSVWI*QCRSPP
Trigger: TGGGGGAGACCGGCATTGGCAAATCCACACTGATGA...CTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACTCACCTCCTCGGTGCTaGCCACCACGGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNSPPRC*PPRQRA
Trigger: TGCCCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGA...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACCCTTCACCTCCTCGGTaGTGCCCACCACGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNPSPPR*CPPRQR
Trigger: CCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGAAGG...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp CACATGCACCACAGTGAGGTGACGCACAAGGCTCATGACATACGGAAGAGTGAACCAGGGGTACTGCCGTaGTCGGACCAGCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: HMHHSEVTHKAHDIRKSEPGVLP*SDQLVP
Trigger: GGGAACAAGCTGGTCCGAGCACGGCAGTACCCCTGG...TTCACTCTTCCGTATGTCATGAGCCTTGTGCGTCACCTCACTGTGGTGCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATTTCTCATTCTCCACCTaGACCACTCCCCAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHFSFST*TTPQGY
Trigger: GTACCCCTGGGGAGTGGTGCAGGTGGAGAATGAGAA...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TGGGCATTAAGCCTCAAGCCCCTTACGGAGCCATGGATAGGAATGAAAAGGGTTTTCCTCAGGGGCTGCTaGGAGGTGGCGTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: WALSLKPLTEPWIGMKRVFLRGC*EVACKA
Trigger: GGCCTTGCACGCCACCTCGCAGCAGCCCCTGAGGAA...AACCCTTTTCATTCCTATCCATGGCTCCGTAAGGGGCTTGAGGCTTAATGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATGGGCACCACGTGAGTTaGCATCTCCACGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHGHHVS*HLHAEQ
Trigger: TTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACGCCTCTTCCTGGCCGTaGCTCGGTGGACACACACAG +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNASSWP*LGGHTQ
Trigger: CTGTGTGTGTCCACCGAGGCACGGCCAGGAAGAGGC...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAATTGTCACTAGAACCTaGTCTGCTGCTGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: RGALCIPLGSSSAQHGASIVTRT*SAAGAW
Trigger: CCATGCTCCAGCAGCAGAGCAGGTTCTAGTGACAAT...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAATTGTCACTAGAACCTaGTCTGCTGCTGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAIVTRT*SAAGAW
Trigger: CCATGCTCCAGCAGCAGAGCAGGTTCTAGTGACAAT...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTATTGTCACTAGAACCTaGTCTGCTGCTGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSIVTRT*SAAGAW
Trigger: CCATGCTCCAGCAGCAGAGCAGGTTCTAGTGACAAT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAACGAATGGCCAAGTCTaGATACTCCAGAGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSATNGQV*ILQSPR
Trigger: CCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGT...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTATATGGCCTTTCAGTATaGCTGGGGTGCGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVYGLSV*LGCDPQ
Trigger: CTGCGGGTCGCACCCCAGGCATACTGAAAGGCCATA...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TTTTTGGTCCCGGAGTGGAAGCTCAGCTTGGCCACAGGATGGGCATTAAGCCTCTGGTCTCCAGTTCCATaGCCTGGTGGTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: FLVPEWKLSLATGWALSLWSPVP*PGGPEL
Trigger: CAGCTCAGGACCACCAGGGCATGGAACTGGAGACCA...GAGGCTTAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp GAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGGAAGACATCTGCTaGTTAACCAGGTGGCTATGG +
Preference number: 4 (lower is better)
Translates to: EMLRPCCSQLPVVAVECPLEDIC*LTRWLW
Trigger: CCATAGCCACCTGGTTAAGCAGCAGATGTCTTCCAG...AGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATGCGGCTGCGGCTGAATaGATCCAATATGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHAAAAE*IQYGHF
Trigger: GAAGTGGCCATATTGGATCCATTCAGCCGCAGCCGC...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTATGCCTCATGGTGACTaGCTTCCTCAGTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPMPHGD*LPQSRR
Trigger: CCTTCGAGACTGAGGAAGCCAGTCACCATGAGGCAT...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGATGCCTCATGGTGACTaGCTTCCTCAGTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGMPHGD*LPQSRR
Trigger: CCTTCGAGACTGAGGAAGCCAGTCACCATGAGGCAT...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACAATGCCTCATGGTGACTaGCTTCCTCAGTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTMPHGD*LPQSRR
Trigger: CCTTCGAGACTGAGGAAGCCAGTCACCATGAGGCAT...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTACAAGGCTGTAAACACTaGAGTCTGTACCGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLQGCKH*SLYRLP
Trigger: TGGGAGCCGGTACAGACTCCAGTGTTTACAGCCTTG...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTCAAGGCTGTAAACACTaGAGTCTGTACCGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPQGCKH*SLYRLP
Trigger: TGGGAGCCGGTACAGACTCCAGTGTTTACAGCCTTG...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATCCAGAGTCCTAGGTTaGCCCATGAACCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSASRVLG*PMNQEF
Trigger: GAATTCCTGGTTCATGGGCCAACCTAGGACTCTGGA...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAGCCACAATGGACGAATaGCCAAGTCTGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: RGALCIPLGSSSAQHGASATMDE*PSLHTP
Trigger: TGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGC...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAATGCGCAGTTTAGGCTaGGATTCGCCAGGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVMRSLG*DSPGSE
Trigger: CTCCGACCCTGGCGAATCCCAGCCTAAACTGCGCAT...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378699.6
CDS-3UTR TCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATTCACGAAGTCGCAGTaGTTCTCATTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTFTKSQ*FSFSTC
Trigger: GCAGGTGGAGAATGAGAATCACTGCGACTTCGTGAA...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTTCACGAAGTCGCAGTaGTTCTCATTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRFTKSQ*FSFSTC
Trigger: GCAGGTGGAGAATGAGAATCACTGCGACTTCGTGAA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTTGCCATCTCCACGCTaGACAATTAGGCCTAGCATC +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPLPSPR*TIRPSI
Trigger: GATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTTGCCATCTCCACGCTaGACAATTAGGCCTAGCATC +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRLPSPR*TIRPSI
Trigger: GATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGTTGCCATCTCCACGCTaGACAATTAGGCCTAGCATC +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGLPSPR*TIRPSI
Trigger: GATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAA...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCATGAGGGGAACTGGGTaGATTTTGCAGCATGTATAC +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCMRGTG*ILQHVY
Trigger: GTATACATGCTGCAAAATTCACCCAGTTCCCCTCAT...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAATTAGCACGTCTTCCTaGGGCTTCCAGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVISTSS*GFQPGS
Trigger: ACTCCCTGGCTGGAAGCCTCAGGAAGACGTGCTAAT...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATAGGGGGAAATGGTCATaGGAAGGAAGACAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHRGKWS*EGRQGH
Trigger: ATGCCCCTGTCTTCCTTCTCATGACCATTTCCCCCT...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGGTCTGTCAAGTGTCCTaGAGATCCTGGGAAGGCTTA +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRVCQVS*RSWEGL
Trigger: TAAGCCTTCCCAGGATCTTCAGGACACTTGACAGAC...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGGTCTGTCAAGTGTCCTaGAGATCCTGGGAAGGCTTA +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGVCQVS*RSWEGL
Trigger: TAAGCCTTCCCAGGATCTTCAGGACACTTGACAGAC...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTAAAAAGAGGGGTAAATaGGACTCTGCAGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSKKRGK*DSADRV
Trigger: GACCCTGTCTGCAGAGTCTCATTTACCCCTCTTTTT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp AATGAGCTGCTGAGGATGGAGCTGGCTATTCTGGACAGACTGCACTGGGACCTCTGCACCACAGTGAGGTaGCGCACAAGGCTCATGACA +
Preference number: 4 (lower is better)
Translates to: NELLRMELAILDRLHWDLCTTVR*RTRLMT
Trigger: TGTCATGAGCCTTGTGCGTCACCTCACTGTGGTGCA...GAGGTCCCAGTGCAGTCTGTCCAGAATAGCCAGCTCCATCCTCAGCAGCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTGCCTCTCATCCTTATTaGTCTGATCCCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPASHPY*SDPQSP
Trigger: TGGGCTTTGGGGATCAGATCAATAAGGATGAGAGGC...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378701.5
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAATGGTCAGCTTGAGCTaGACGTTGCTCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVMVSLS*TLLSWR
Trigger: CCTCCAGGAGAGCAACGTGCAGCTCAAGCTGACCAT...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAAGAGACTTCAGGGAGTaGCCTGTGGGCGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVRDFRE*PVGVMK
Trigger: CTTCATCACGCCCACAGGGCACTCCCTGAAGTCTCT...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TTTTTGGTCCCGGAGTGGAAGCTCAGCTTGGCCACAGGATGGGCATTAAGCCTCAGAGACTTCAGGGAGTaGCCTGTGGGCGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: FLVPEWKLSLATGWALSLRDFRE*PVGVMK
Trigger: CTTCATCACGCCCACAGGGCACTCCCTGAAGTCTCT...GAGGCTTAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGGACTGCGTTAATCTCTaGAACAGCCTCATCATCCGT +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQDCVNL*NSLIIR
Trigger: ACGGATGATGAGGCTGTTGCAGAGATTAACGCAGTC...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTGACTGCGTTAATCTCTaGAACAGCCTCATCATCCGT +
Preference number: 4 (lower is better)
Translates to: EMLRPCCSQLPVVAVECPDCVNL*NSLIIR
Trigger: ACGGATGATGAGGCTGTTGCAGAGATTAACGCAGTC...AGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTATTCTCATTCTCCACCTaGACCACTCCCCAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVFSFST*TTPQGY
Trigger: GTACCCCTGGGGAGTGGTGCAGGTGGAGAATGAGAA...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp CAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGCTGCTGGAAGACATCTaGTGCTTAACCAGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: QMEMLRPCCSQLPVVAVELLEDI*CLTRWL
Trigger: TAGCCACCTGGTTAAGCAGCAGATGTCTTCCAGCAG...CTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CCA 90 bp GGTCATATCAAGAACTCTCCTCTAGTCCAGAACCCATTTTACAGATGGAGATGCAGCGCTCCAGGTCGGTaGCCGCCATGGCGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GHIKNSPLVQNPFYRWRCSAPGR*PPWRAP
Trigger: CGGAGCTCGCCATGGCGGCCACCGACCTGGAGCGCT...GCATCTCCATCTGTAAAATGGGTTCTGGACTAGAGGAGAGTTCTTGATATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CCA 90 bp TGGGCATTAAGCCTCAAGCCCCTTACGGAGCCATGGATAGGAATGAAAAGGGTTGAGGCTCCGGGGCTCTaGCTCTGCATTCGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: WALSLKPLTEPWIGMKRVEAPGL*LCIREA
Trigger: CGCTTCTCGAATGCAGAGCCAGAGCCCCGGAGCCTC...AACCCTTTTCATTCCTATCCATGGCTCCGTAAGGGGCTTGAGGCTTAATGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCCGATGTAGTCAACTATaGGCCTGTAACTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCRCSQL*ACNSHP
Trigger: AGGATGAGAGTTACAGGCCCATAGTTGACTACATCG...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
CDS-3UTR CCA 90 bp ATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGGGAACTCCTTCCTCTTaGCCTCGTATGTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: MLRPCCSQLPVVAVECPLGTPSS*PRMSLV
Trigger: TACAAGAGACATACGAGGCCAAGAGGAAGGAGTTCC...CAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGGGAACTCCTTCCTCTTaGCCTCGTATGTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQGTPSS*PRMSLV
Trigger: TACAAGAGACATACGAGGCCAAGAGGAAGGAGTTCC...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCCACAGACAACAGCTTTaGGCTGCTGTTCCATTTACA +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCHRQQL*AAVPFT
Trigger: TGTAAATGGAACAGCAGCCCAAAGCTGTTGTCTGTG...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATCCAGAGTCCTAGGTTaGCCCATGAACCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTSRVLG*PMNQEF
Trigger: GAATTCCTGGTTCATGGGCCAACCTAGGACTCTGGA...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTATCCAGAGTCCTAGGTTaGCCCATGAACCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLSRVLG*PMNQEF
Trigger: GAATTCCTGGTTCATGGGCCAACCTAGGACTCTGGA...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCTCGAAGGTCGTGTTaGAGAGTGTGTTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPSRRSC*RVCSSV
Trigger: CACTGATGAACACACTCTTCAACACGACCTTCGAGA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGTCTCGAAGGTCGTGTTaGAGAGTGTGTTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGSRRSC*RVCSSV
Trigger: CACTGATGAACACACTCTTCAACACGACCTTCGAGA...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp CAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTCTCGAAGGTCGTGTTaGAGAGTGTGTTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: QMEMLRPCCSQLPVVAVESRRSC*RVCSSV
Trigger: CACTGATGAACACACTCTTCAACACGACCTTCGAGA...CTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR TCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTATCTCGAAGGTCGTGTTaGAGAGTGTGTTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLSRRSC*RVCSSV
Trigger: CACTGATGAACACACTCTTCAACACGACCTTCGAGA...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATCTCGAAGGTCGTGTTaGAGAGTGTGTTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTSRRSC*RVCSSV
Trigger: CACTGATGAACACACTCTTCAACACGACCTTCGAGA...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAATGAGGGGAACTGGGTaGATTTTGCAGCATGTATAC +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAMRGTG*ILQHVY
Trigger: GTATACATGCTGCAAAATTCACCCAGTTCCCCTCAT...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTATGAGGGGAACTGGGTaGATTTTGCAGCATGTATAC +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSMRGTG*ILQHVY
Trigger: GTATACATGCTGCAAAATTCACCCAGTTCCCCTCAT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAATGAGGGGAACTGGGTaGATTTTGCAGCATGTATAC +
Preference number: 4 (lower is better)
Translates to: RGALCIPLGSSSAQHGASMRGTG*ILQHVY
Trigger: GTATACATGCTGCAAAATTCACCCAGTTCCCCTCAT...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGAGGAAGACAGGGGCATaGAAAGCAAACTACCAATTC +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQRKTGA*KANYQF
Trigger: GAATTGGTAGTTTGCTTTTCATGCCCCTGTCTTCCT...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTATTCTTATGTATCCAATaGACCTGCTGGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLFLCIQ*TCWVTR
Trigger: CCTGGTGACCCAGCAGGTTCATTGGATACATAAGAA...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATTCTTATGTATCCAATaGACCTGCTGGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTFLCIQ*TCWVTR
Trigger: CCTGGTGACCCAGCAGGTTCATTGGATACATAAGAA...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGAAAAAGAGGGGTAAATaGGACTCTGCAGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGKKRGK*DSADRV
Trigger: GACCCTGTCTGCAGAGTCTCATTTACCCCTCTTTTT...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAAGCTCCCAAATCCTCTaGAACCCCGTTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLSSQIL*NPVSFS
Trigger: AGAGAAAGAAACGGGGTTTCAGAGGATTTGGGAGCT...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378699.6
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGGACTGCGTTAATCTCTaGAACAGCCTCATCATCCGT +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRDCVNL*NSLIIR
Trigger: ACGGATGATGAGGCTGTTGCAGAGATTAACGCAGTC...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGGACTGCGTTAATCTCTaGAACAGCCTCATCATCCGT +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGDCVNL*NSLIIR
Trigger: ACGGATGATGAGGCTGTTGCAGAGATTAACGCAGTC...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTGACTGCGTTAATCTCTaGAACAGCCTCATCATCCGT +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPDCVNL*NSLIIR
Trigger: ACGGATGATGAGGCTGTTGCAGAGATTAACGCAGTC...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAGACTGCGTTAATCTCTaGAACAGCCTCATCATCCGT +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLDCVNL*NSLIIR
Trigger: ACGGATGATGAGGCTGTTGCAGAGATTAACGCAGTC...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GAGGTGTTTACAGAGTCTACCCTAAACTCGTTTGTGCCTTTGGAACAGCTGTTTGTGGCGTGCAAGGCCTaGGACTGCAGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: EVFTESTLNSFVPLEQLFVACKA*DCRAST
Trigger: GGTGGAGGCCCTGCAGTCGCAGGCCTTGCACGCCAC...AAACAGCTGTTCCAAAGGCACAAACGAGTTTAGGGTAGACTCTGTAAACACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAAGGGGAAAGCTCCTTTaGCGCTCATTTTTCCCTAAT +
Preference number: 4 (lower is better)
Translates to: RGALCIPLGSSSAQHGASRGKLL*RSFFPN
Trigger: ATTAGGGAAAAATGAGCGGCAAAGGAGCTTTCCCCT...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TGGGCATTAAGCCTCAAGCCCCTTACGGAGCCATGGATAGGAATGAAAAGGGTTAGCTGGAGAGGCTCATaGCCGGCTGGTGTGCTCCTA +
Preference number: 4 (lower is better)
Translates to: WALSLKPLTEPWIGMKRVSWRGS*PAGVLL
Trigger: TAGGAGCACACCAGCCGGGCATGAGCCTCTCCAGCT...AACCCTTTTCATTCCTATCCATGGCTCCGTAAGGGGCTTGAGGCTTAATGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAATGCCTCATGGTGACTaGCTTCCTCAGTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVMPHGD*LPQSRR
Trigger: CCTTCGAGACTGAGGAAGCCAGTCACCATGAGGCAT...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp ATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGTTGATCTTGAACTTGTaGAGCTCGCTCTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: MLRPCCSQLPVVAVECPLLILNL*SSLLEM
Trigger: CATCTCCAAGAGCGAGCTCCACAAGTTCAAGATCAA...CAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGGGAACTCCTTCCTCTTaGCCTCGTATGTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRGTPSS*PRMSLV
Trigger: TACAAGAGACATACGAGGCCAAGAGGAAGGAGTTCC...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTGGAACTCCTTCCTCTTaGCCTCGTATGTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPGTPSS*PRMSLV
Trigger: TACAAGAGACATACGAGGCCAAGAGGAAGGAGTTCC...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGGGAACTCCTTCCTCTTaGCCTCGTATGTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGGTPSS*PRMSLV
Trigger: TACAAGAGACATACGAGGCCAAGAGGAAGGAGTTCC...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCACACAGACAACAGCTTTaGGCTGCTGTTCCATTTACA +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAHRQQL*AAVPFT
Trigger: TGTAAATGGAACAGCAGCCCAAAGCTGTTGTCTGTG...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTGCCAGGACTTGGTCCTaGAAATCAATAATGCAAGCC +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPARTWS*KSIMQA
Trigger: GGCTTGCATTATTGATTTCCAGGACCAAGTCCTGGC...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGGCCAGGACTTGGTCCTaGAAATCAATAATGCAAGCC +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGARTWS*KSIMQA
Trigger: GGCTTGCATTATTGATTTCCAGGACCAAGTCCTGGC...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATGCCACAATGGACGAATaGCCAAGTCTGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHATMDE*PSLHTP
Trigger: TGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGC...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TTTTTGGTCCCGGAGTGGAAGCTCAGCTTGGCCACAGGATGGGCATTAAGCCTCAGGCTCATGCCCGGCTaGTGTGCTCCTATATCTGAT +
Preference number: 4 (lower is better)
Translates to: FLVPEWKLSLATGWALSLRLMPG*CAPISD
Trigger: ATCAGATATAGGAGCACACCAGCCGGGCATGAGCCT...GAGGCTTAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTGGAAGACCAGCCACTaGCTTTCTTCTTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRWKTSH*LSSCPC
Trigger: ACAAGGACAAGAAGAAAGCCAGTGGCTGGTCTTCCA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378701.5
ENST00000458488.2
CDS-3UTR CCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTGGAAGACCAGCCACTaGCTTTCTTCTTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPWKTSH*LSSCPC
Trigger: ACAAGGACAAGAAGAAAGCCAGTGGCTGGTCTTCCA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378701.5
ENST00000458488.2
CDS-3UTR TCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACCCACAATGGTCAGCTTaGGCTGCACGTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNPQWSA*AARCSP
Trigger: AGGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGG...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGAACTCTCATCCTTATTaGTCTGATCCCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGNSHPY*SDPQSP
Trigger: TGGGCTTTGGGGATCAGATCAATAAGGATGAGAGTT...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
CDS-3UTR TCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAAACTCTCATCCTTATTaGTCTGATCCCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLNSHPY*SDPQSP
Trigger: TGGGCTTTGGGGATCAGATCAATAAGGATGAGAGTT...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
CDS-3UTR TCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGAACTCTCATCCTTATTaGTCTGATCCCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRNSHPY*SDPQSP
Trigger: TGGGCTTTGGGGATCAGATCAATAAGGATGAGAGTT...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
CDS-3UTR TCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTAACTCTCATCCTTATTaGTCTGATCCCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPNSHPY*SDPQSP
Trigger: TGGGCTTTGGGGATCAGATCAATAAGGATGAGAGTT...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
CDS-3UTR TCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTATTGCCATCTCCACGCTaGACAATTAGGCCTAGCATC +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVLPSPR*TIRPSI
Trigger: GATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAA...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGATGAGGGGAACTGGGTaGATTTTGCAGCATGTATAC +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGMRGTG*ILQHVY
Trigger: GTATACATGCTGCAAAATTCACCCAGTTCCCCTCAT...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACAATGAGGGGAACTGGGTaGATTTTGCAGCATGTATAC +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTMRGTG*ILQHVY
Trigger: GTATACATGCTGCAAAATTCACCCAGTTCCCCTCAT...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTATGAGGGGAACTGGGTaGATTTTGCAGCATGTATAC +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPMRGTG*ILQHVY
Trigger: GTATACATGCTGCAAAATTCACCCAGTTCCCCTCAT...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR TCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCCAACCTTTTTCCCACTaGGTACTCTTTACATTTGGA +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCQPFSH*VLFTFG
Trigger: TCCAAATGTAAAGAGTACTCAGTGGGAAAAAGGTTG...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACACCGTATTCTCAACACTaGCATTCTTGGTGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTPYSQH*HSWWLV
Trigger: TACAAGCCACCAAGAATGTCAGTGTTGAGAATACGG...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACAAGGAAGACAGGGGCATaGAAAGCAAACTACCAATTC +
Preference number: 4 (lower is better)
Translates to: GALCIPLGSSSAQHGASTRKTGA*KANYQF
Trigger: GAATTGGTAGTTTGCTTTTCATGCCCCTGTCTTCCT...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGAGGAAGACAGGGGCATaGAAAGCAAACTACCAATTC +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGRKTGA*KANYQF
Trigger: GAATTGGTAGTTTGCTTTTCATGCCCCTGTCTTCCT...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATAAAAAGAGGGGTAAATaGGACTCTGCAGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHKKRGK*DSADRV
Trigger: GACCCTGTCTGCAGAGTCTCATTTACCCCTCTTTTT...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATCAGTTTGGCATTTGTaGCGAGCAAAGCAGAGAATT +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSASVWHL*RAKQRI
Trigger: AATTCTCTGCTTTGCTCGTCACAAATGCCAAACTGA...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR TCA 90 bp GAGCCATGGATAGGAATGAAAAGGGTTGGGCAACATTTGATGTTCCCTGATGGATCCACGTCGCATCCCTaGCCAGGCAGCTGCAGCACT +
Preference number: 4 (lower is better)
Translates to: EPWIGMKRVGQHLMFPDGSTSHP*PGSCST
Trigger: AGTGCTGCAGCTGCCTGGTCAGGGATGCGACGTGGA...TCCATCAGGGAACATCAAATGTTGCCCAACCCTTTTCATTCCTATCCATGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp TTACAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGCCTCTCATCCTTATTaGTCTGATCCCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LQMEMLRPCCSQLPVVAVASHPY*SDPQSP
Trigger: TGGGCTTTGGGGATCAGATCAATAAGGATGAGAGGC...AACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATGACTGCGTTAATCTCTaGAACAGCCTCATCATCCGT +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHDCVNL*NSLIIR
Trigger: ACGGATGATGAGGCTGTTGCAGAGATTAACGCAGTC...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCATGTGCATTCATGACTaGGTTAATCTCTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: CCSQLPVVAVECPLPPSFMCIHD*VNLCNS
Trigger: GCTGTTGCAGAGATTAACGCAGTCATGAATGCACAT...GAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGATGTGCATTCATGACTaGGTTAATCTCTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQMCIHD*VNLCNS
Trigger: GCTGTTGCAGAGATTAACGCAGTCATGAATGCACAT...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp CCAAATCAAACAGAAGCAAAAGACAGCAAGATGGACACCGTGAAAGGGCAGTCATCACCTCCTCGGTGCTaGCCACCACGGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PNQTEAKDSKMDTVKGQSSPPRC*PPRQRA
Trigger: TGCCCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGA...TGACTGCCCTTTCACGGTGTCCATCTTGCTGTCTTTTGCTTCTGTTTGATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR GCA 90 bp GAGCCATGGATAGGAATGAAAAGGGTTGGGCAACATTTGATGTTCCCTGATGGACCTTCACCTCCTCGGTaGTGCCCACCACGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: EPWIGMKRVGQHLMFPDGPSPPR*CPPRQR
Trigger: CCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGAAGG...TCCATCAGGGAACATCAAATGTTGCCCAACCCTTTTCATTCCTATCCATGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp CCAAATCAAACAGAAGCAAAAGACAGCAAGATGGACACCGTGAAAGGGCAGTCAACTCCCCAGGGGTACTaGCGTGCTCGGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PNQTEAKDSKMDTVKGQSTPQGY*RARTSL
Trigger: CAAGCTGGTCCGAGCACGGCAGTACCCCTGGGGAGT...TGACTGCCCTTTCACGGTGTCCATCTTGCTGTCTTTTGCTTCTGTTTGATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR GCA 90 bp AAGGGCAGTCAGTTTGGCATTTGTGACGAGCAAAGCAGAGAATTCACCTCAGTTTGCCGGCTGTGGGTCTaGTCGCGGAGGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: KGSQFGICDEQSREFTSVCRLWV*SRRSSM
Trigger: CATGGAAGACCTCCGCGAGCAGACCCACAGCCGGCA...AACTGAGGTGAATTCTCTGCTTTGCTCGTCACAAATGCCAAACTGACTGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR GCA 90 bp GGTCATATCAAGAACTCTCCTCTAGTCCAGAACCCATTTTACAGATGGAGATGCTGCTGCGAGGTGGCGTaGAAGGCCTGCGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: GHIKNSPLVQNPFYRWRCCCEVA*KACDCR
Trigger: CCTGCAGTCGCAGGCCTTGCACGCCACCTCGCAGCA...GCATCTCCATCTGTAAAATGGGTTCTGGACTAGAGGAGAGTTCTTGATATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGAACTGGGTGAATTTTaGAGCATGTATACCAGACCA +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSELGEF*SMYTRP
Trigger: TGGTCTGGTATACATGCTGCAAAATTCACCCAGTTC...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGACAACAGCTTTGGGCTaGTGTTCCATTTACATTCAC +
Preference number: 4 (lower is better)
Translates to: WGATRRPQWTNGQVCILQTTALG*CSIYIH
Trigger: GTGAATGTAAATGGAACAGCAGCCCAAAGCTGTTGT...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGAGGGGAAAGCTCCTTTaGCGCTCATTTTTCCCTAAT +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGRGKLL*RSFFPN
Trigger: ATTAGGGAAAAATGAGCGGCAAAGGAGCTTTCCCCT...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCGATGTAGTCAACTATaGGCCTGTAACTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRRCSQL*ACNSHP
Trigger: AGGATGAGAGTTACAGGCCCATAGTTGACTACATCG...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
CDS-3UTR CCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTACGATGTAGTCAACTATaGGCCTGTAACTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLRCSQL*ACNSHP
Trigger: AGGATGAGAGTTACAGGCCCATAGTTGACTACATCG...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
CDS-3UTR CCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTATTGATCTTGAACTTGTaGAGCTCGCTCTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLLILNL*SSLLEM
Trigger: CATCTCCAAGAGCGAGCTCCACAAGTTCAAGATCAA...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTTGATCTTGAACTTGTaGAGCTCGCTCTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRLILNL*SSLLEM
Trigger: CATCTCCAAGAGCGAGCTCCACAAGTTCAAGATCAA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGTTGATCTTGAACTTGTaGAGCTCGCTCTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGLILNL*SSLLEM
Trigger: CATCTCCAAGAGCGAGCTCCACAAGTTCAAGATCAA...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CCA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATGCCAGGACTTGGTCCTaGAAATCAATAATGCAAGCC +
Preference number: 4 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHARTWS*KSIMQA
Trigger: GGCTTGCATTATTGATTTCCAGGACCAAGTCCTGGC...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAGCCACAATGGACGAATaGCCAAGTCTGCATACTCCA +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVATMDE*PSLHTP
Trigger: TGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGC...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp AATGAGCTGCTGAGGATGGAGCTGGCTATTCTGGACAGACTGCACTGGGACCTCGTTTACAACATGGGATaGCAAAGCACAGGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: NELLRMELAILDRLHWDLVYNMG*QSTGVH
Trigger: GTGCACGCCTGTGCTTTGCCATCCCATGTTGTAAAC...GAGGTCCCAGTGCAGTCTGTCCAGAATAGCCAGCTCCATCCTCAGCAGCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp AACATTAAAAACCATGGTCTCCAGTTCCATGCCCTGGTGGTCCTGAGCTGGCCCCTGGGACCTCTATATTaGGACGCCGCTGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: NIKNHGLQFHALVVLSWPLGPLY*DAAGLL
Trigger: AAGAAGTCCAGCGGCGTCCCAATATAGAGGTCCCAG...GGGCCAGCTCAGGACCACCAGGGCATGGAACTGGAGACCATGGTTTTTAATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp TTTTTGGTCCCGGAGTGGAAGCTCAGCTTGGCCACAGGATGGGCATTAAGCCTCTCTCGAAGGTCGTGTTaGAGAGTGTGTTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: FLVPEWKLSLATGWALSLSRRSC*RVCSSV
Trigger: CACTGATGAACACACTCTTCAACACGACCTTCGAGA...GAGGCTTAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACATGTCTCTTGTAGGCTaGAGGGCTGGCTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNMSLVG*RAGCHH
Trigger: ATGGTGACAGCCAGCCCTTCAGCCTACAAGAGACAT...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTATGCCGCAGGCGCACGCATaGCTCATGGTGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CFITKTGHRCQVAEFRLMPQAHA*LMVTGF
Trigger: GAAGCCAGTCACCATGAGGCATGCGTGCGCCTGCGG...CATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAATGTGCATTCATGACTaGGTTAATCTCTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLMCIHD*VNLCNS
Trigger: GCTGTTGCAGAGATTAACGCAGTCATGAATGCACAT...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTATGTGCATTCATGACTaGGTTAATCTCTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPMCIHD*VNLCNS
Trigger: GCTGTTGCAGAGATTAACGCAGTCATGAATGCACAT...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGATGTGCATTCATGACTaGGTTAATCTCTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGMCIHD*VNLCNS
Trigger: GCTGTTGCAGAGATTAACGCAGTCATGAATGCACAT...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGATGTGCATTCATGACTaGGTTAATCTCTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGMCIHD*VNLCNS
Trigger: GCTGTTGCAGAGATTAACGCAGTCATGAATGCACAT...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp ACTGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTAACTCCCCAGGGGTACTaGCGTGCTCGGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TVSLRKLATVAKLQSFVLTPQGY*RARTSL
Trigger: CAAGCTGGTCCGAGCACGGCAGTACCCCTGGGGAGT...TAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp AAAGACTGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTTCCTTCCTCAGGGGCTaGTGCGAGGTGGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: KDCFITKTGHRCQVAEFRSFLRG*CEVACK
Trigger: CTTGCACGCCACCTCGCAGCAGCCCCTGAGGAAGGA...ACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACAGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGGAACTGGGTGAATTTTaGAGCATGTATACCAGACCA +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGELGEF*SMYTRP
Trigger: TGGTCTGGTATACATGCTGCAAAATTCACCCAGTTC...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGGAACTGGGTGAATTTTaGAGCATGTATACCAGACCA +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRELGEF*SMYTRP
Trigger: TGGTCTGGTATACATGCTGCAAAATTCACCCAGTTC...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTGAACTGGGTGAATTTTaGAGCATGTATACCAGACCA +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPELGEF*SMYTRP
Trigger: TGGTCTGGTATACATGCTGCAAAATTCACCCAGTTC...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGACAACAGCTTTGGGCTaGTGTTCCATTTACATTCAC +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGTTALG*CSIYIH
Trigger: GTGAATGTAAATGGAACAGCAGCCCAAAGCTGTTGT...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCTTTACATTTGGAATATaGAGGATTTGCTTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCFTFGI*RICLGV
Trigger: GACTCCCAAGCAAATCCTGCATATTCCAAATGTAAA...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCCATTTGCCCTGGATATaGCAGTTTACCTTTTTAGAT +
Preference number: 4 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCHLPWI*QFTFLD
Trigger: ATCTAAAAAGGTAAACTGGCATATCCAGGGCAAATG...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp CCAAATCAAACAGAAGCAAAAGACAGCAAGATGGACACCGTGAAAGGGCAGTCATCAGTATGCCTGGGGTaGGACCCGCAGGCCACAATG +
Preference number: 4 (lower is better)
Translates to: PNQTEAKDSKMDTVKGQSSVCLG*DPQATM
Trigger: CATTGTGGCCTGCGGGTCGCACCCCAGGCATACTGA...TGACTGCCCTTTCACGGTGTCCATCTTGCTGTCTTTTGCTTCTGTTTGATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR GCA 90 bp ACTGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTATGGCGGGCCACCAGCTaGTGCAGTTCAAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TVSLRKLATVAKLQSFVLWRATS*CSSRAP
Trigger: TGGAGCCCTTGAACTGCAGCAGCTGGTGGCCCGCCA...TAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp GAGCCATGGATAGGAATGAAAAGGGTTGGGCAACATTTGATGTTCCCTGATGGAGCGTGCACACGCCCTTaGACATGCACCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: EPWIGMKRVGQHLMFPDGACTRP*TCTTVR
Trigger: CCTCACTGTGGTGCATGTGCAAGGGCGTGTGCACGC...TCCATCAGGGAACATCAAATGTTGCCCAACCCTTTTCATTCCTATCCATGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAGGAACTCCTTCCTCTTaGCCTCGTATGTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVGTPSS*PRMSLV
Trigger: TACAAGAGACATACGAGGCCAAGAGGAAGGAGTTCC...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TTACAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGCTATGGATGTGAGCTaGATTCTGAGAGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: LQMEMLRPCCSQLPVVAVAMDVS*ILRADP
Trigger: TGGATCAGCTCTCAGAATCCAGCTCACATCCATAGC...AACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTGTAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR TCA 90 bp TTTTTGGTCCCGGAGTGGAAGCTCAGCTTGGCCACAGGATGGGCATTAAGCCTCAACTCTCATCCTTATTaGTCTGATCCCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: FLVPEWKLSLATGWALSLNSHPY*SDPQSP
Trigger: TGGGCTTTGGGGATCAGATCAATAAGGATGAGAGTT...GAGGCTTAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp TGGGCATTAAGCCTCAAGCCCCTTACGGAGCCATGGATAGGAATGAAAAGGGTTATGTCTCTTGTAGGCTaGAGGGCTGGCTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: WALSLKPLTEPWIGMKRVMSLVG*RAGCHH
Trigger: ATGGTGACAGCCAGCCCTTCAGCCTACAAGAGACAT...AACCCTTTTCATTCCTATCCATGGCTCCGTAAGGGGCTTGAGGCTTAATGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTCAACCTTTTTCCCACTaGGTACTCTTTACATTTGGA +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPQPFSH*VLFTFG
Trigger: TCCAAATGTAAAGAGTACTCAGTGGGAAAAAGGTTG...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTACCGTATTCTCAACACTaGCATTCTTGGTGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVPYSQH*HSWWLV
Trigger: TACAAGCCACCAAGAATGTCAGTGTTGAGAATACGG...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTCATAGCATAAAAAGTTaGATTGTCACTAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSHSIKS*IVTRTC
Trigger: GCAGGTTCTAGTGACAATTCAACTTTTTATGCTATG...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCTGTATCCTTCTCACTaGCAATCTATACAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGLYPSH*QSIQKQ
Trigger: CTGCTTTTGTATAGATTGTCAGTGAGAAGGATACAG...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378699.6
CDS-3UTR GCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCATTTACATTTGGAATATaGAGGATTTGCTTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: RGALCIPLGSSSAQHGASFTFGI*RICLGV
Trigger: GACTCCCAAGCAAATCCTGCATATTCCAAATGTAAA...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAAGGGGAAAGCTCCTTTaGCGCTCATTTTTCCCTAAT +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVRGKLL*RSFFPN
Trigger: ATTAGGGAAAAATGAGCGGCAAAGGAGCTTTCCCCT...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGGACAGGTCTGGTTTATaGCTTTTGATCTGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGDRSGL*LLIWCN
Trigger: ATTACACCAGATCAAAAGGCATAAACCAGACCTGTC...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp CACCTACACACAATCCTTATTGAAGCTTTAGACCATATTGATCTGGCACTTAAAAGCGCTCCAGGTCGGTaGCCGCCATGGCGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: HLHTILIEALDHIDLALKSAPGR*PPWRAP
Trigger: CGGAGCTCGCCATGGCGGCCACCGACCTGGAGCGCT...TTTAAGTGCCAGATCAATATGGTCTAAAGCTTCAATAAGGATTGTGTGTAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp TGGGCATTAAGCCTCAAGCCCCTTACGGAGCCATGGATAGGAATGAAAAGGGTTATGCCTCATGGTGACTaGCTTCCTCAGTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: WALSLKPLTEPWIGMKRVMPHGD*LPQSRR
Trigger: CCTTCGAGACTGAGGAAGCCAGTCACCATGAGGCAT...AACCCTTTTCATTCCTATCCATGGCTCCGTAAGGGGCTTGAGGCTTAATGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTACGATGTAGTCAACTATaGGCCTGTAACTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVRCSQL*ACNSHP
Trigger: AGGATGAGAGTTACAGGCCCATAGTTGACTACATCG...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
CDS-3UTR CCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTACACAGACAACAGCTTTaGGCTGCTGTTCCATTTACA +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVHRQQL*AAVPFT
Trigger: TGTAAATGGAACAGCAGCCCAAAGCTGTTGTCTGTG...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp AAGGGCAGTCAGTTTGGCATTTGTGACGAGCAAAGCAGAGAATTCACCTCAGTTACCCGCAGGCCACAATaGACGAATGGCCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: KGSQFGICDEQSREFTSVTRRPQ*TNGQVC
Trigger: GCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGT...AACTGAGGTGAATTCTCTGCTTTGCTCGTCACAAATGCCAAACTGACTGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR CCA 90 bp TGGGCATTAAGCCTCAAGCCCCTTACGGAGCCATGGATAGGAATGAAAAGGGTTTCAAGGGCTCCACACTaGCCTTGGTCATCATCACCT +
Preference number: 4 (lower is better)
Translates to: WALSLKPLTEPWIGMKRVSRAPH*PWSSSP
Trigger: AGGTGATGATGACCAAGGCCAGTGTGGAGCCCTTGA...AACCCTTTTCATTCCTATCCATGGCTCCGTAAGGGGCTTGAGGCTTAATGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp ATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTATGATAAGCGCTGGCCCCATGTGTTaGAGCTGCTGCCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: ITKTGHRCQVAEFRLMISAGPMC*SCCLRG
Trigger: TCCTCTGAGGCAGCAGCTCCAACACATGGGGCCAGC...GCTTATCATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp ATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTATGATAAGCCTGGTGGTCCTGAGCTaGCCCCATGTGTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ITKTGHRCQVAEFRLMISLVVLS*PHVLEL
Trigger: CAGCTCCAACACATGGGGCCAGCTCAGGACCACCAG...GCTTATCATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACTCTCGAAGGTCGTGTTaGAGAGTGTGTTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNSRRSC*RVCSSV
Trigger: CACTGATGAACACACTCTTCAACACGACCTTCGAGA...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCATAGCATAAAAAGTTaGATTGTCACTAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGHSIKS*IVTRTC
Trigger: GCAGGTTCTAGTGACAATTCAACTTTTTATGCTATG...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTCATAGCATAAAAAGTTaGATTGTCACTAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPHSIKS*IVTRTC
Trigger: GCAGGTTCTAGTGACAATTCAACTTTTTATGCTATG...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTTGCAAGGCCTGCGACTaGAGGGCCTCCACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFCKACD*RASTAA
Trigger: GGCTGCGGTGGAGGCCCTGCAGTCGCAGGCCTTGCA...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAGAACTGGGTGAATTTTaGAGCATGTATACCAGACCA +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVELGEF*SMYTRP
Trigger: TGGTCTGGTATACATGCTGCAAAATTCACCCAGTTC...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGTTTACATTTGGAATATaGAGGATTTGCTTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRFTFGI*RICLGV
Trigger: GACTCCCAAGCAAATCCTGCATATTCCAAATGTAAA...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTTTACATTTGGAATATaGAGGATTTGCTTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPFTFGI*RICLGV
Trigger: GACTCCCAAGCAAATCCTGCATATTCCAAATGTAAA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCATTTGCCCTGGATATaGCAGTTTACCTTTTTAGAT +
Preference number: 4 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRHLPWI*QFTFLD
Trigger: ATCTAAAAAGGTAAACTGGCATATCCAGGGCAAATG...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAAGACATGATAGTAAATaGCAACATGATCCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSARHDSK*QHDPVR
Trigger: TCTTACAGGATCATGTTGGCATTTACTATCATGTCT...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTAGACATGATAGTAAATaGCAACATGATCCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: SRLGPSLERHITAPSGNSRHDSK*QHDPVR
Trigger: TCTTACAGGATCATGTTGGCATTTACTATCATGTCT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAAGACATGATAGTAAATaGCAACATGATCCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: RGALCIPLGSSSAQHGASRHDSK*QHDPVR
Trigger: TCTTACAGGATCATGTTGGCATTTACTATCATGTCT...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AACATTAAAAACCATGGTCTCCAGTTCCATGCCCTGGTGGTCCTGAGCTGGCCCCCACCGTTGCCAAGTTaGAGAGTTTCGTCTTATGAT +
Preference number: 4 (lower is better)
Translates to: NIKNHGLQFHALVVLSWPPPLPS*RVSSYD
Trigger: ATCATAAGACGAAACTCTGCAACTTGGCAACGGTGG...GGGCCAGCTCAGGACCACCAGGGCATGGAACTGGAGACCATGGTTTTTAATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp AAGGGCAGTCAGTTTGGCATTTGTGACGAGCAAAGCAGAGAATTCACCTCAGTTAATATGGCCACTTCCTaGAAACTCCCCTTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: KGSQFGICDEQSREFTSVNMATS*KLPLAA
Trigger: CGCCGCCAAGGGGAGTTTCCAGGAAGTGGCCATATT...AACTGAGGTGAATTCTCTGCTTTGCTCGTCACAAATGCCAAACTGACTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR CCA 90 bp AACATTAAAAACCATGGTCTCCAGTTCCATGCCCTGGTGGTCCTGAGCTGGCCCCGATGTAGTCAACTATaGGCCTGTAACTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: NIKNHGLQFHALVVLSWPRCSQL*ACNSHP
Trigger: AGGATGAGAGTTACAGGCCCATAGTTGACTACATCG...GGGCCAGCTCAGGACCACCAGGGCATGGAACTGGAGACCATGGTTTTTAATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp GAGGTGTTTACAGAGTCTACCCTAAACTCGTTTGTGCCTTTGGAACAGCTGTTTTGTAGGCTGAAGGGCTaGCTGTCACCATCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: EVFTESTLNSFVPLEQLFCRLKG*LSPSLS
Trigger: GGACAGCGATGGTGACAGCCAGCCCTTCAGCCTACA...AAACAGCTGTTCCAAAGGCACAAACGAGTTTAGGGTAGACTCTGTAAACACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp CCAAATCAAACAGAAGCAAAAGACAGCAAGATGGACACCGTGAAAGGGCAGTCATCTGCTGCTGGAGCATaGAGCCCCTCACAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: PNQTEAKDSKMDTVKGQSSAAGA*SPSQVK
Trigger: CTTTACCTGTGAGGGGCTCCATGCTCCAGCAGCAGA...TGACTGCCCTTTCACGGTGTCCATCTTGCTGTCTTTTGCTTCTGTTTGATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR TCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACAACTCTCATCCTTATTaGTCTGATCCCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNNSHPY*SDPQSP
Trigger: TGGGCTTTGGGGATCAGATCAATAAGGATGAGAGTT...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
CDS-3UTR TCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACCCGTATTCTCAACACTaGCATTCTTGGTGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNPYSQH*HSWWLV
Trigger: TACAAGCCACCAAGAATGTCAGTGTTGAGAATACGG...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACAGGAAGACAGGGGCATaGAAAGCAAACTACCAATTC +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNRKTGA*KANYQF
Trigger: GAATTGGTAGTTTGCTTTTCATGCCCCTGTCTTCCT...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGTCATATCAAGAACTCTCCTCTAGTCCAGAACCCATTTTACAGATGGAGATGCAGAGACTTCAGGGAGTaGCCTGTGGGCGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: GHIKNSPLVQNPFYRWRCRDFRE*PVGVMK
Trigger: CTTCATCACGCCCACAGGGCACTCCCTGAAGTCTCT...GCATCTCCATCTGTAAAATGGGTTCTGGACTAGAGGAGAGTTCTTGATATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp TGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTATGTTCTCATTCTCCACCTaGACCACTCCCCAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: CFITKTGHRCQVAEFRLMFSFST*TTPQGY
Trigger: GTACCCCTGGGGAGTGGTGCAGGTGGAGAATGAGAA...CATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp GGTCATATCAAGAACTCTCCTCTAGTCCAGAACCCATTTTACAGATGGAGATGCTTCTCATTCTCCACCTaGACCACTCCCCAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: GHIKNSPLVQNPFYRWRCFSFST*TTPQGY
Trigger: GTACCCCTGGGGAGTGGTGCAGGTGGAGAATGAGAA...GCATCTCCATCTGTAAAATGGGTTCTGGACTAGAGGAGAGTTCTTGATATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTTTCCTCAGGGGCTGCTaGGAGGTGGCGTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFFLRGC*EVACKA
Trigger: GGCCTTGCACGCCACCTCGCAGCAGCCCCTGAGGAA...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAGACAGGTCTGGTTTATaGCTTTTGATCTGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: GPSLERHITAPSGNSDTVDRSGL*LLIWCN
Trigger: ATTACACCAGATCAAAAGGCATAAACCAGACCTGTC...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TTTTTGGTCCCGGAGTGGAAGCTCAGCTTGGCCACAGGATGGGCATTAAGCCTCACTCGTTTGTGCCTTTaGAACAGCTGTTTACAACAT +
Preference number: 4 (lower is better)
Translates to: FLVPEWKLSLATGWALSLTRLCL*NSCLQH
Trigger: ATGTTGTAAACAGCTGTTCCAAAGGCACAAACGAGT...GAGGCTTAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp CCAAATCAAACAGAAGCAAAAGACAGCAAGATGGACACCGTGAAAGGGCAGTCAGTCTGTCAAGTGTCCTaGAGATCCTGGGAAGGCTTA +
Preference number: 4 (lower is better)
Translates to: PNQTEAKDSKMDTVKGQSVCQVS*RSWEGL
Trigger: TAAGCCTTCCCAGGATCTTCAGGACACTTGACAGAC...TGACTGCCCTTTCACGGTGTCCATCTTGCTGTCTTTTGCTTCTGTTTGATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR GCA 90 bp ATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTATGATAAGCTCATCAGTGTGGATTTaGCAATGCCGGTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: ITKTGHRCQVAEFRLMISSSVWI*QCRSPP
Trigger: TGGGGGAGACCGGCATTGGCAAATCCACACTGATGA...GCTTATCATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACATGTGCATTCATGACTaGGTTAATCTCTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNMCIHD*VNLCNS
Trigger: GCTGTTGCAGAGATTAACGCAGTCATGAATGCACAT...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp CAACACAGTTCCACCAGACTCCCACTTCTAAAGGACATTAAATTAACTTTACAATCACCTCCTCGGTGCTaGCCACCACGGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: QHSSTRLPLLKDIKLTLQSPPRC*PPRQRA
Trigger: TGCCCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGA...TTGTAAAGTTAATTTAATGTCCTTTAGAAGTGGGAGTCTGGTGGAACTGTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp CAACACAGTTCCACCAGACTCCCACTTCTAAAGGACATTAAATTAACTTTACAATGCCGGCTGTGGGTCTaGTCGCGGAGGTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: QHSSTRLPLLKDIKLTLQCRLWV*SRRSSM
Trigger: CATGGAAGACCTCCGCGAGCAGACCCACAGCCGGCA...TTGTAAAGTTAATTTAATGTCCTTTAGAAGTGGGAGTCTGGTGGAACTGTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp TGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTATGCCCATGTGTTGGAGCTaGTGCCTCAGAGGAATCCTT +
Preference number: 4 (lower is better)
Translates to: CFITKTGHRCQVAEFRLMPMCWS*CLRGIL
Trigger: AAGGATTCCTCTGAGGCAGCAGCTCCAACACATGGG...CATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp TTTTTCAGAATGGAAACATTGTCATCTAGGTACTTTCCGCTCATAACGATGATGCTGTCGAAACCCACATaGCCGCCCAGGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FFRMETLSSRYFPLITMMLSKPT*PPRERL
Trigger: GAGCCTCTCCCTGGGCGGCCATGTGGGTTTCGACAG...CATCATCGTTATGAGCGGAAAGTACCTAGATGACAATGTTTCCATTCTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp GGTCATATCAAGAACTCTCCTCTAGTCCAGAACCCATTTTACAGATGGAGATGCATGCCTCATGGTGACTaGCTTCCTCAGTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: GHIKNSPLVQNPFYRWRCMPHGD*LPQSRR
Trigger: CCTTCGAGACTGAGGAAGCCAGTCACCATGAGGCAT...GCATCTCCATCTGTAAAATGGGTTCTGGACTAGAGGAGAGTTCTTGATATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CCA 90 bp AAGGGCAGTCAGTTTGGCATTTGTGACGAGCAAAGCAGAGAATTCACCTCAGTTTCCAGAGTCCTAGGTTaGCCCATGAACCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: KGSQFGICDEQSREFTSVSRVLG*PMNQEF
Trigger: GAATTCCTGGTTCATGGGCCAACCTAGGACTCTGGA...AACTGAGGTGAATTCTCTGCTTTGCTCGTCACAAATGCCAAACTGACTGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR CCA 90 bp AAAGACTGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTTTTTTGGTCCCGGAGTaGAAGCTCAGCTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: KDCFITKTGHRCQVAEFRFLVPE*KLSLAT
Trigger: TGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA...ACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACAGTCTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTCAGCCTTCCGGCGATTaGAGGCGTTGGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFQPSGD*RRWSPP
Trigger: AGGAGGAGACCAACGCCTTCAATCGCCGGAAGGCTG...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACCAACCTTTTTCCCACTaGGTACTCTTTACATTTGGA +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNQPFSH*VLFTFG
Trigger: TCCAAATGTAAAGAGTACTCAGTGGGAAAAAGGTTG...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTAGGTGCAGTGAGGCTTaGTGGAGGGACCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFRCSEA*WRDLWR
Trigger: CCTCCACAGGTCCCTCCAGCAAGCCTCACTGCACCT...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp CAACACAGTTCCACCAGACTCCCACTTCTAAAGGACATTAAATTAACTTTACAAGGCAAAGCACAGGCGTaGACACGCCCTTGCACATGC +
Preference number: 4 (lower is better)
Translates to: QHSSTRLPLLKDIKLTLQGKAQA*TRPCTC
Trigger: GCATGTGCAAGGGCGTGTGCACGCCTGTGCTTTGCC...TTGTAAAGTTAATTTAATGTCCTTTAGAAGTGGGAGTCTGGTGGAACTGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTTGCAGTGAGGCTTGCTaGAGGGACCTGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFCSEAC*RDLWRQ
Trigger: CTGCCTCCACAGGTCCCTCCAGCAAGCCTCACTGCA...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp ATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTATGATAAGCCAGCTGTTTACAACATaGGATGGCAAAGCACAGGCG +
Preference number: 4 (lower is better)
Translates to: ITKTGHRCQVAEFRLMISQLFTT*DGKAQA
Trigger: CGCCTGTGCTTTGCCATCCCATGTTGTAAACAGCTG...GCTTATCATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACCATAGCATAAAAAGTTaGATTGTCACTAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNHSIKS*IVTRTC
Trigger: GCAGGTTCTAGTGACAATTCAACTTTTTATGCTATG...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp CCAAATCAAACAGAAGCAAAAGACAGCAAGATGGACACCGTGAAAGGGCAGTCAAGGGGAAAGCTCCTTTaGCGCTCATTTTTCCCTAAT +
Preference number: 4 (lower is better)
Translates to: PNQTEAKDSKMDTVKGQSRGKLL*RSFFPN
Trigger: ATTAGGGAAAAATGAGCGGCAAAGGAGCTTTCCCCT...TGACTGCCCTTTCACGGTGTCCATCTTGCTGTCTTTTGCTTCTGTTTGATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR GCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTTATGGCCTTTCAGTATaGCTGGGGTGCGACCCGCAG +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFYGLSV*LGCDPQ
Trigger: CTGCGGGTCGCACCCCAGGCATACTGAAAGGCCATA...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTATGAAAACTGGCCACCGTTaGCAAGTTGCAGAGTTTCGT +
Preference number: 4 (lower is better)
Translates to: CFITKTGHRCQVAEFRLMKTGHR*QVAEFR
Trigger: ACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTT...CATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTACCCGCAGGCCACAATaGACGAATGGCCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFTRRPQ*TNGQVC
Trigger: GCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGT...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTCCACAATGGTCAGCTTaGGCTGCACGTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFPQWSA*AARCSP
Trigger: AGGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGG...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp TTTTTCAGAATGGAAACATTGTCATCTAGGTACTTTCCGCTCATAACGATGATGCCACAATGGTCAGCTTaGGCTGCACGTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FFRMETLSSRYFPLITMMPQWSA*AARCSP
Trigger: AGGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGG...CATCATCGTTATGAGCGGAAAGTACCTAGATGACAATGTTTCCATTCTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp TGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTATGGGGTTGGGCAACATTTaGTGTTCCCTGATGGAAATT +
Preference number: 4 (lower is better)
Translates to: CFITKTGHRCQVAEFRLMGLGNI*CSLMEI
Trigger: AATTTCCATCAGGGAACATCAAATGTTGCCCAACCC...CATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp AGTATGTTTCTATTTTTCAGAATGGAAACATTGTCATCTAGGTACTTTCCGCTCCCCCGAATGAGCTGCTaGGGATGGAGCTGGCTATTC +
Preference number: 4 (lower is better)
Translates to: SMFLFFRMETLSSRYFPLPRMSC*GWSWLF
Trigger: GAATAGCCAGCTCCATCCTCAGCAGCTCATTCGGGG...GAGCGGAAAGTACCTAGATGACAATGTTTCCATTCTGAAAAATAGAAACATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp GGTCATATCAAGAACTCTCCTCTAGTCCAGAACCCATTTTACAGATGGAGATGCCTGGATTCTGAGAGCTaGTCCAACTCAAACCTTTCT +
Preference number: 4 (lower is better)
Translates to: GHIKNSPLVQNPFYRWRCLDSES*SNSNLS
Trigger: AGAAAGGTTTGAGTTGGATCAGCTCTCAGAATCCAG...GCATCTCCATCTGTAAAATGGGTTCTGGACTAGAGGAGAGTTCTTGATATGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR GCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTTTGAGGGGAGCGTTGTaGATTCCTCTGGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFLRGAL*IPLGSS
Trigger: GGAGCTACCCAGAGGAATGCACAACGCTCCCCTCAA...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TTTTTCAGAATGGAAACATTGTCATCTAGGTACTTTCCGCTCATAACGATGATGTGGAGCTGGCTATTCTaGACAGACTGCACTGGGACC +
Preference number: 4 (lower is better)
Translates to: FFRMETLSSRYFPLITMMWSWLF*TDCTGT
Trigger: GGTCCCAGTGCAGTCTGTCCAGAATAGCCAGCTCCA...CATCATCGTTATGAGCGGAAAGTACCTAGATGACAATGTTTCCATTCTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR CAA 72 bp GTGTTTACAGAGTCTACCCTAAACTCGTTTGTGCCTTaGGAACAGCTGTTTACAACATGGGATGGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: VFTESTLNSFVP*EQLFTTWDGKA
Trigger: TGCTTTGCCATCCCATGTTGTAAACAGCTGTTCCAAAGGCACAAACGAGTTTAGGGTAGACTCTGTAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp AGTATGTTTCTATTTTTCAGAATGGAAACATTGTCATCTAGGTACTTTCCGCTCATGGTCAGCTTGAGCTaGACGTTGCTCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SMFLFFRMETLSSRYFPLMVSLS*TLLSWR
Trigger: CCTCCAGGAGAGCAACGTGCAGCTCAAGCTGACCAT...GAGCGGAAAGTACCTAGATGACAATGTTTCCATTCTGAAAAATAGAAACATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp GAGGTGTTTACAGAGTCTACCCTAAACTCGTTTGTGCCTTTGGAACAGCTGTTTATGTGCATTCATGACTaGGTTAATCTCTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: EVFTESTLNSFVPLEQLFMCIHD*VNLCNS
Trigger: GCTGTTGCAGAGATTAACGCAGTCATGAATGCACAT...AAACAGCTGTTCCAAAGGCACAAACGAGTTTAGGGTAGACTCTGTAAACACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp CAACACAGTTCCACCAGACTCCCACTTCTAAAGGACATTAAATTAACTTTACAACTGGACAGACTGCACTaGGACCTCTATATTGGGACG +
Preference number: 4 (lower is better)
Translates to: QHSSTRLPLLKDIKLTLQLDRLH*DLYIGT
Trigger: CGTCCCAATATAGAGGTCCCAGTGCAGTCTGTCCAG...TTGTAAAGTTAATTTAATGTCCTTTAGAAGTGGGAGTCTGGTGGAACTGTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp CAACACAGTTCCACCAGACTCCCACTTCTAAAGGACATTAAATTAACTTTACAATTCACGAAGTCGCAGTaGTTCTCATTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: QHSSTRLPLLKDIKLTLQFTKSQ*FSFSTC
Trigger: GCAGGTGGAGAATGAGAATCACTGCGACTTCGTGAA...TTGTAAAGTTAATTTAATGTCCTTTAGAAGTGGGAGTCTGGTGGAACTGTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp GAGCCATGGATAGGAATGAAAAGGGTTGGGCAACATTTGATGTTCCCTGATGGATGCACTTTTGATCATTaGTATAGGAAAAGTATGGCG +
Preference number: 4 (lower is better)
Translates to: EPWIGMKRVGQHLMFPDGCTFDH*YRKSMA
Trigger: CGCCATACTTTTCCTATATCAATGATCAAAAGTGCA...TCCATCAGGGAACATCAAATGTTGCCCAACCCTTTTCATTCCTATCCATGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTATTGTCACTAGAACCTaGTCTGCTGCTGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFIVTRT*SAAGAW
Trigger: CCATGCTCCAGCAGCAGAGCAGGTTCTAGTGACAAT...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTTCTCGAAGGTCGTGTTaGAGAGTGTGTTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFSRRSC*RVCSSV
Trigger: CACTGATGAACACACTCTTCAACACGACCTTCGAGA...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR TCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTAAAAAGAGGGGTAAATaGGACTCTGCAGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFKKRGK*DSADRV
Trigger: GACCCTGTCTGCAGAGTCTCATTTACCCCTCTTTTT...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp TTTTTCAGAATGGAAACATTGTCATCTAGGTACTTTCCGCTCATAACGATGATGGACTGCGTTAATCTCTaGAACAGCCTCATCATCCGT +
Preference number: 4 (lower is better)
Translates to: FFRMETLSSRYFPLITMMDCVNL*NSLIIR
Trigger: ACGGATGATGAGGCTGTTGCAGAGATTAACGCAGTC...CATCATCGTTATGAGCGGAAAGTACCTAGATGACAATGTTTCCATTCTGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTGGAACTCCTTCCTCTTaGCCTCGTATGTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFGTPSS*PRMSLV
Trigger: TACAAGAGACATACGAGGCCAAGAGGAAGGAGTTCC...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp TTTTTCAGAATGGAAACATTGTCATCTAGGTACTTTCCGCTCATAACGATGATGGGAACTCCTTCCTCTTaGCCTCGTATGTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: FFRMETLSSRYFPLITMMGTPSS*PRMSLV
Trigger: TACAAGAGACATACGAGGCCAAGAGGAAGGAGTTCC...CATCATCGTTATGAGCGGAAAGTACCTAGATGACAATGTTTCCATTCTGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR TCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTCCGTATTCTCAACACTaGCATTCTTGGTGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFPYSQH*HSWWLV
Trigger: TACAAGCCACCAAGAATGTCAGTGTTGAGAATACGG...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp CAACACAGTTCCACCAGACTCCCACTTCTAAAGGACATTAAATTAACTTTACAATTGATCTTGAACTTGTaGAGCTCGCTCTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: QHSSTRLPLLKDIKLTLQLILNL*SSLLEM
Trigger: CATCTCCAAGAGCGAGCTCCACAAGTTCAAGATCAA...TTGTAAAGTTAATTTAATGTCCTTTAGAAGTGGGAGTCTGGTGGAACTGTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTTTGATCTTGAACTTGTaGAGCTCGCTCTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFLILNL*SSLLEM
Trigger: CATCTCCAAGAGCGAGCTCCACAAGTTCAAGATCAA...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp AGTATGTTTCTATTTTTCAGAATGGAAACATTGTCATCTAGGTACTTTCCGCTCCCCCTTACGGAGCCATaGATAGGAATGAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: SMFLFFRMETLSSRYFPLPLTEP*IGMKRV
Trigger: AACCCTTTTCATTCCTATCCATGGCTCCGTAAGGGG...GAGCGGAAAGTACCTAGATGACAATGTTTCCATTCTGAAAAATAGAAACATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR CAA 72 bp GAGCCATGGATAGGAATGAAAAGGGTTGGGCAACATTaGATGTTCCCTGATGGAAATTTAAATTGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: EPWIGMKRVGQH*MFPDGNLNCLH
Trigger: GTGCAAACAATTTAAATTTCCATCAGGGAACATCAAATGTTGCCCAACCCTTTTCATTCCTATCCATGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR GCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTATGTGCATTCATGACTaGGTTAATCTCTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFMCIHD*VNLCNS
Trigger: GCTGTTGCAGAGATTAACGCAGTCATGAATGCACAT...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CCA 90 bp CACCTACACACAATCCTTATTGAAGCTTTAGACCATATTGATCTGGCACTTAAAAGGAATGAAAAGGGTTaGGCAACATTTGATGTTCCC +
Preference number: 4 (lower is better)
Translates to: HLHTILIEALDHIDLALKRNEKG*ATFDVP
Trigger: GGGAACATCAAATGTTGCCCAACCCTTTTCATTCCT...TTTAAGTGCCAGATCAATATGGTCTAAAGCTTCAATAAGGATTGTGTGTAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CCA 90 bp AGTATGTTTCTATTTTTCAGAATGGAAACATTGTCATCTAGGTACTTTCCGCTCTTTCATTACGAAAACTaGCCACCGTTGCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: SMFLFFRMETLSSRYFPLFHYEN*PPLPSC
Trigger: GCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAA...GAGCGGAAAGTACCTAGATGACAATGTTTCCATTCTGAAAAATAGAAACATACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378719.7
3UTR CAA 72 bp TTAATAGCATCCCCTTTCTCTCTCAATAGTCCCAATTaGGGCAACGAATTATATGGTGATTCTTCTACCTCA +
Preference number: 4 (lower is better)
Translates to: LIASPFSLNSPN*GNELYGDSSTS
Trigger: TGAGGTAGAAGAATCACCATATAATTCGTTGCCCAAATTGGGACTATTGAGAGAGAAAGGGGATGCTATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR GCA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTCATTTGCCCTGGATATaGCAGTTTACCTTTTTAGAT +
Preference number: 4 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFHLPWI*QFTFLD
Trigger: ATCTAAAAAGGTAAACTGGCATATCCAGGGCAAATG...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS CCA 90 bp CAGGTCGGTGGCCGCCATGGCGAGCTCCGCACCGGGCGGGTGGGCTaGGACGAGCGCAGGGGCAGCGACAGGGACCAGCCGGCTGCGGGA +
Preference number: 5 (lower is better)
Translates to: QVGGRHGELRTGRVG*DERRGSDRDQPAAG
Trigger: TCCCGCAGCCGGCTGGTCCCTGTCGCTGCCCCTGCGCTCGTCCCAGCCCACCCGCCCGGTGCGGAGCTCGCCATGGCGGCCACCGACCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000378719.7
ENST00000378721.8
ENST00000458488.2
ENST00000481794.5
ENST00000492490.1
ENST00000620483.4
CDS GCA 90 bp GGTGGGCTGGGACGAGCGCAGGGGCAGCGACAGGGACCAGCCGGCTaGGGGACGCGCTCCGCCCGGGCGGCTGCGGCTGAATGGATCCAA +
Preference number: 5 (lower is better)
Translates to: GGLGRAQGQRQGPAG*GTRSARAAAAEWIQ
Trigger: TTGGATCCATTCAGCCGCAGCCGCCCGGGCGGAGCGCGTCCCGCAGCCGGCTGGTCCCTGTCGCTGCCCCTGCGCTCGTCCCAGCCCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000492490.1
ENST00000620483.4
CDS CCA 90 bp GCTCTGGCTCTGCATTCGAGAAGCGCTCCAGGTCGGTGGCCGCCATaGCGAGCTCCGCACCGGGCGGGTGGGCTGGGACGAGCGCAGGGG +
Preference number: 5 (lower is better)
Translates to: ALALHSRSAPGRWPP*RAPHRAGGLGRAQG
Trigger: CCCCTGCGCTCGTCCCAGCCCACCCGCCCGGTGCGGAGCTCGCCATGGCGGCCACCGACCTGGAGCGCTTCTCGAATGCAGAGCCAGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000378719.7
ENST00000378721.8
ENST00000458488.2
ENST00000481794.5
ENST00000620483.4
CDS GCA 90 bp TGCGGGAGACCCGTCGGATCCGGGAGAGGCCGCGGCAGCCTAGTCTaGGGGTGTCTTGGGCCCCACCTGATGCTCCGGCCGGAGCTAAGG +
Preference number: 5 (lower is better)
Translates to: CGRPVGSGRGRGSLV*GCLGPHLMLRPELR
Trigger: CCTTAGCTCCGGCCGGAGCATCAGGTGGGGCCCAAGACACCCGCAGACTAGGCTGCCGCGGCCTCTCCCGGATCCGACGGGTCTCCCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378699.6
ENST00000448933.5
CDS CCA 90 bp CCAGCCGGCTGCGGGACGCGCTCCGCCCGGGCGGCTGCGGCTGAATaGATCCAATATGGCCACTTCCTGGAAACTCCCCTTGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: PAGCGTRSARAAAAE*IQYGHFLETPLGGG
Trigger: GCCGCCGCCAAGGGGAGTTTCCAGGAAGTGGCCATATTGGATCCATTCAGCCGCAGCCGCCCGGGCGGAGCGCGTCCCGCAGCCGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CAA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCATCCTGGAAACTCCCCTaGGCGGCGGCGGCGGGAGAA +
Preference number: 5 (lower is better)
Translates to: RGALCIPLGSSSAQHGASSWKLP*AAAAGE
Trigger: TTCTCCCGCCGCCGCCGCCAAGGGGAGTTTCCAGGA...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CAA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATCCTGGAAACTCCCCTaGGCGGCGGCGGCGGGAGAA +
Preference number: 5 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSASWKLP*AAAAGE
Trigger: TTCTCCCGCCGCCGCCGCCAAGGGGAGTTTCCAGGA...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CAA 90 bp GCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCCGTGCTCGGACCAGCTaGTTCCCCACCTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: AAHSFQWWPLSALCLLPSRARTS*FPTFTS
Trigger: GGAGGTGAAGGTGGGGAACAAGCTGGTCCGAGCACG...GGAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CAA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCCGTGCTCGGACCAGCTaGTTCCCCACCTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCRARTS*FPTFTS
Trigger: GGAGGTGAAGGTGGGGAACAAGCTGGTCCGAGCACG...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAGCAGCCTTCCGGCGATaGAAGGCGTTGGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RGALCIPLGSSSAQHGASAAFRR*KALVSS
Trigger: GGAGGAGACCAACGCCTTCAATCGCCGGAAGGCTGC...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp ATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGGCAGCCTTCCGGCGATaGAAGGCGTTGGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: MLRPCCSQLPVVAVECPLAAFRR*KALVSS
Trigger: GGAGGAGACCAACGCCTTCAATCGCCGGAAGGCTGC...CAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CAA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCGTGCTCGGACCAGCTaGTTCCCCACCTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRRARTS*FPTFTS
Trigger: GGAGGTGAAGGTGGGGAACAAGCTGGTCCGAGCACG...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTACGTGCTCGGACCAGCTaGTTCCCCACCTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLRARTS*FPTFTS
Trigger: GGAGGTGAAGGTGGGGAACAAGCTGGTCCGAGCACG...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTCGCTTTTCCTCCACCTaGCGCTTCTCCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: SRLGPSLERHITAPSGNSRFSST*RFSSWW
Trigger: CCACCAGGAGGAGAAGCGCAAGGTGGAGGAAAAGCG...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp TGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCGCTTTTCCTCCACCTaGCGCTTCTCCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: CCSQLPVVAVECPLPPSFRFSST*RFSSWW
Trigger: CCACCAGGAGGAGAAGCGCAAGGTGGAGGAAAAGCG...GAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CAA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCACGCTTTTCCTCCACCTaGCGCTTCTCCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: RGALCIPLGSSSAQHGASRFSST*RFSSWW
Trigger: CCACCAGGAGGAGAAGCGCAAGGTGGAGGAAAAGCG...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGGCAGCCTTCCGGCGATaGAAGGCGTTGGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGAAFRR*KALVSS
Trigger: GGAGGAGACCAACGCCTTCAATCGCCGGAAGGCTGC...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGGCAGCCTTCCGGCGATaGAAGGCGTTGGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRAAFRR*KALVSS
Trigger: GGAGGAGACCAACGCCTTCAATCGCCGGAAGGCTGC...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS GCA 90 bp GTTGCTCTCCTGGAGGTCATAGGTCTGGGGCCGCAGGCGCACGCATaGCTCATGGTGACTGGCTTCCTCAGTCTCGAAGGTCGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: VALLEVIGLGPQAHA*LMVTGFLSLEGRVE
Trigger: TTCAACACGACCTTCGAGACTGAGGAAGCCAGTCACCATGAGGCATGCGTGCGCCTGCGGCCCCAGACCTATGACCTCCAGGAGAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000296873.11
ENST00000371478.2
ENST00000371493.7
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000378719.7
ENST00000378721.8
ENST00000414594.5
ENST00000448933.5
ENST00000453480.5
ENST00000458488.2
ENST00000481794.5
ENST00000620483.4
CDS-3UTR CAA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCTCCACAATGGTCAGCTaGAGCTGCACGTTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCSTMVS*SCTLLS
Trigger: GGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGGA...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCGCTTTTCCTCCACCTaGCGCTTCTCCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRRFSST*RFSSWW
Trigger: CCACCAGGAGGAGAAGCGCAAGGTGGAGGAAAAGCG...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTCGCTTTTCCTCCACCTaGCGCTTCTCCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPRFSST*RFSSWW
Trigger: CCACCAGGAGGAGAAGCGCAAGGTGGAGGAAAAGCG...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCGCTTTTCCTCCACCTaGCGCTTCTCCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGRFSST*RFSSWW
Trigger: CCACCAGGAGGAGAAGCGCAAGGTGGAGGAAAAGCG...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp GAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACATGCAGCCTTCCGGCGATaGAAGGCGTTGGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ERCAFLWVAPVPSTVLQHAAFRR*KALVSS
Trigger: GGAGGAGACCAACGCCTTCAATCGCCGGAAGGCTGC...ATGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTACCAGCCTTCGGCTCCTaGTGCAACCAACGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLPAFGS*CNQRAG
Trigger: TCCTGCTCGTTGGTTGCACAAGGAGCCGAAGGCTGG...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378699.6
CDS-3UTR CAA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTTCCACAATGGTCAGCTaGAGCTGCACGTTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SRLGPSLERHITAPSGNSSTMVS*SCTLLS
Trigger: GGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGGA...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp GAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTTCCACAATGGTCAGCTaGAGCTGCACGTTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: EMLRPCCSQLPVVAVECPSTMVS*SCTLLS
Trigger: GGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGGA...AGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CAA 90 bp TGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCCTTTCTTCTTGTCCTaGTCCTTCCTCAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: CCSQLPVVAVECPLPPSFPFFLS*SFLRGC
Trigger: GCAGCCCCTGAGGAAGGACAAGGACAAGAAGAAAGG...GAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CAA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGTTCATCAGTGTGGATTaGCCAATGCCGGTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGFISVD*PMPVSP
Trigger: GGGGGAGACCGGCATTGGCAAATCCACACTGATGAA...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTTCATCAGTGTGGATTaGCCAATGCCGGTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPFISVD*PMPVSP
Trigger: GGGGGAGACCGGCATTGGCAAATCCACACTGATGAA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCCACAATGGTCAGCTaGAGCTGCACGTTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPSTMVS*SCTLLS
Trigger: GGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGGA...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGTCCACAATGGTCAGCTaGAGCTGCACGTTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGSTMVS*SCTLLS
Trigger: GGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGGA...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTATCCACAATGGTCAGCTaGAGCTGCACGTTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLSTMVS*SCTLLS
Trigger: GGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGGA...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTCTCCAGAGTCCTAGGTaGGCCCATGAACCAGGAATT +
Preference number: 5 (lower is better)
Translates to: SRLGPSLERHITAPSGNSLQSPR*AHEPGI
Trigger: AATTCCTGGTTCATGGGCCAACCTAGGACTCTGGAG...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGGCTTTCTTCTTGTCCTaGTCCTTCCTCAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRAFFLS*SFLRGC
Trigger: GCAGCCCCTGAGGAAGGACAAGGACAAGAAGAAAGC...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378701.5
ENST00000458488.2
CDS TCA 90 bp GGTGCGGGCTCTCAATTCCTGCTTCAGGAGGGACTAGGTACTCCCTaGAGAGCCCGCTTCTTGGGGAAGTATCAAGATTGCAGGGGTGAC +
Preference number: 5 (lower is better)
Translates to: GAGSQFLLQEGLGTP*RARFLGKYQDCRGD
Trigger: GTCACCCCTGCAATCTTGATACTTCCCCAAGAAGCGGGCTCTTCAGGGAGTACCTAGTCCCTCCTGAAGCAGGAATTGAGAGCCCGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492490.1
CDS CCA 90 bp CTTCGGCTCCTTGTGCAACCAACGAGCAGGATGCGCAGTTTAGGCTaGGATTCCTGCAATAGAAAAGCGGAGCTCGACGGTCAAGGCGTC +
Preference number: 5 (lower is better)
Translates to: LRLLVQPTSRMRSLG*DSCNRKAELDGQGV
Trigger: GACGCCTTGACCGTCGAGCTCCGCTTTTCTATTGCAGGAATCCCAGCCTAAACTGCGCATCCTGCTCGTTGGTTGCACAAGGAGCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414594.5
CDS-3UTR CAA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCGTCTCGAAGGTCGTGTaGAAGAGTGTGTTCATCAGT +
Preference number: 5 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCVSKVV*KSVFIS
Trigger: ACTGATGAACACACTCTTCAACACGACCTTCGAGAC...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp GCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCGTCTCGAAGGTCGTGTaGAAGAGTGTGTTCATCAGT +
Preference number: 5 (lower is better)
Translates to: AAHSFQWWPLSALCLLPSVSKVV*KSVFIS
Trigger: ACTGATGAACACACTCTTCAACACGACCTTCGAGAC...GGAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CAA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCACCCATGATCTTGATCTaGAACTTGTGGAGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAPMILI*NLWSSL
Trigger: GAGCGAGCTCCACAAGTTCAAGATCAAGATCATGGG...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACCGTGCTCGGACCAGCTaGTTCCCCACCTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNRARTS*FPTFTS
Trigger: GGAGGTGAAGGTGGGGAACAAGCTGGTCCGAGCACG...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp CACATGCACCACAGTGAGGTGACGCACAAGGCTCATGACATACGGAAGAGTGAACGTGCTCGGACCAGCTaGTTCCCCACCTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: HMHHSEVTHKAHDIRKSERARTS*FPTFTS
Trigger: GGAGGTGAAGGTGGGGAACAAGCTGGTCCGAGCACG...TTCACTCTTCCGTATGTCATGAGCCTTGTGCGTCACCTCACTGTGGTGCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAGCACAGACAACAGCTTaGGGCTGCTGTTCCATTTAC +
Preference number: 5 (lower is better)
Translates to: RGALCIPLGSSSAQHGASAQTTA*GCCSIY
Trigger: GTAAATGGAACAGCAGCCCAAAGCTGTTGTCTGTGC...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCTCCAGAGTCCTAGGTaGGCCCATGAACCAGGAATT +
Preference number: 5 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGLQSPR*AHEPGI
Trigger: AATTCCTGGTTCATGGGCCAACCTAGGACTCTGGAG...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCACTGGCTTTCTTCTaGTCCTTGTCCTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGPLAFF*SLSFLR
Trigger: CCTGAGGAAGGACAAGGACAAGAAGAAAGCCAGTGG...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378701.5
ENST00000458488.2
CDS-3UTR CAA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTACCACTGGCTTTCTTCTaGTCCTTGTCCTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLPLAFF*SLSFLR
Trigger: CCTGAGGAAGGACAAGGACAAGAAGAAAGCCAGTGG...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378701.5
ENST00000458488.2
CDS GCA 90 bp ATTCCTGCAATAGAAAAGCGGAGCTCGACGGTCAAGGCGTCAGATTaGAAGTGTCCATCACCCTGCCTGTCCCAAGGGCTTGGGACAACG +
Preference number: 5 (lower is better)
Translates to: IPAIEKRSSTVKASD*KCPSPCLSQGLGTT
Trigger: CGTTGTCCCAAGCCCTTGGGACAGGCAGGGTGATGGACACTTGCAATCTGACGCCTTGACCGTCGAGCTCCGCTTTTCTATTGCAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414594.5
CDS CCA 90 bp ATTAAAAACCATGGTCTCCAGTTCCATGCCCTGGTGGTCCTGAGCTaGCCCCATGTGTTGGAGCTGCTGCCTCAGAGGAATCCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: IKNHGLQFHALVVLS*PHVLELLPQRNPSL
Trigger: GAGGGAAGGATTCCTCTGAGGCAGCAGCTCCAACACATGGGGCCAGCTCAGGACCACCAGGGCATGGAACTGGAGACCATGGTTTTTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378719.7
ENST00000481030.1
CDS-3UTR CAA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGTCTCGAAGGTCGTGTaGAAGAGTGTGTTCATCAGT +
Preference number: 5 (lower is better)
Translates to: SRLGPSLERHITAPSGNSVSKVV*KSVFIS
Trigger: ACTGATGAACACACTCTTCAACACGACCTTCGAGAC...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAGTCTCGAAGGTCGTGTaGAAGAGTGTGTTCATCAGT +
Preference number: 5 (lower is better)
Translates to: RGALCIPLGSSSAQHGASVSKVV*KSVFIS
Trigger: ACTGATGAACACACTCTTCAACACGACCTTCGAGAC...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp TTTTTGGTCCCGGAGTGGAAGCTCAGCTTGGCCACAGGATGGGCATTAAGCCTCTCCACAATGGTCAGCTaGAGCTGCACGTTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: FLVPEWKLSLATGWALSLSTMVS*SCTLLS
Trigger: GGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGGA...GAGGCTTAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAATCTTGATCTTGAACTaGTGGAGCTCGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAILILN*WSSLLE
Trigger: CTCCAAGAGCGAGCTCCACAAGTTCAAGATCAAGAT...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCCATGATCTTGATCTaGAACTTGTGGAGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGPMILI*NLWSSL
Trigger: GAGCGAGCTCCACAAGTTCAAGATCAAGATCATGGG...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCCCATGATCTTGATCTaGAACTTGTGGAGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRPMILI*NLWSSL
Trigger: GAGCGAGCTCCACAAGTTCAAGATCAAGATCATGGG...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTCCCATGATCTTGATCTaGAACTTGTGGAGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPPMILI*NLWSSL
Trigger: GAGCGAGCTCCACAAGTTCAAGATCAAGATCATGGG...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTACCCATGATCTTGATCTaGAACTTGTGGAGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLPMILI*NLWSSL
Trigger: GAGCGAGCTCCACAAGTTCAAGATCAAGATCATGGG...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAAACTCGCCCATGATCTaGATCTTGAACTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: RGALCIPLGSSSAQHGASNSPMI*ILNLWS
Trigger: GCTCCACAAGTTCAAGATCAAGATCATGGGCGAGTT...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp GAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTAACTCGCCCATGATCTaGATCTTGAACTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: EMLRPCCSQLPVVAVECPNSPMI*ILNLWS
Trigger: GCTCCACAAGTTCAAGATCAAGATCATGGGCGAGTT...AGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CAA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAAACTCGCCCATGATCTaGATCTTGAACTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSANSPMI*ILNLWS
Trigger: GCTCCACAAGTTCAAGATCAAGATCATGGGCGAGTT...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGAACTCGCCCATGATCTaGATCTTGAACTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: WGATRRPQWTNGQVCILQNSPMI*ILNLWS
Trigger: GCTCCACAAGTTCAAGATCAAGATCATGGGCGAGTT...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp CACATGCACCACAGTGAGGTGACGCACAAGGCTCATGACATACGGAAGAGTGAACGCTTTTCCTCCACCTaGCGCTTCTCCTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: HMHHSEVTHKAHDIRKSERFSST*RFSSWW
Trigger: CCACCAGGAGGAGAAGCGCAAGGTGGAGGAAAAGCG...TTCACTCTTCCGTATGTCATGAGCCTTGTGCGTCACCTCACTGTGGTGCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCACGCTGGACATGGTCTaGTTCATGTTCCAATTCCAT +
Preference number: 5 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCTLDMV*FMFQFH
Trigger: ATGGAATTGGAACATGAACAAGACCATGTCCAGCGT...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTGCACAGACAACAGCTTaGGGCTGCTGTTCCATTTAC +
Preference number: 5 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPAQTTA*GCCSIY
Trigger: GTAAATGGAACAGCAGCCCAAAGCTGTTGTCTGTGC...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp AATGAGCTGCTGAGGATGGAGCTGGCTATTCTGGACAGACTGCACTGGGACCTCCTGTTCTTCTTGTCCTaGTCCTTCCTCAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: NELLRMELAILDRLHWDLLFFLS*SFLRGC
Trigger: GCAGCCCCTGAGGAAGGACAAGGACAAGAAGAACAG...GAGGTCCCAGTGCAGTCTGTCCAGAATAGCCAGCTCCATCCTCAGCAGCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAGTCTCGAAGGTCGTGTaGAAGAGTGTGTTCATCAGT +
Preference number: 5 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLVSKVV*KSVFIS
Trigger: ACTGATGAACACACTCTTCAACACGACCTTCGAGAC...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGGTCTCGAAGGTCGTGTaGAAGAGTGTGTTCATCAGT +
Preference number: 5 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGVSKVV*KSVFIS
Trigger: ACTGATGAACACACTCTTCAACACGACCTTCGAGAC...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTGTCTCGAAGGTCGTGTaGAAGAGTGTGTTCATCAGT +
Preference number: 5 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPVSKVV*KSVFIS
Trigger: ACTGATGAACACACTCTTCAACACGACCTTCGAGAC...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTATCTTGATCTTGAACTaGTGGAGCTCGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPILILN*WSSLLE
Trigger: CTCCAAGAGCGAGCTCCACAAGTTCAAGATCAAGAT...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGATCTTGATCTTGAACTaGTGGAGCTCGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRILILN*WSSLLE
Trigger: CTCCAAGAGCGAGCTCCACAAGTTCAAGATCAAGAT...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAATCTTGATCTTGAACTaGTGGAGCTCGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLILILN*WSSLLE
Trigger: CTCCAAGAGCGAGCTCCACAAGTTCAAGATCAAGAT...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGAACTCGCCCATGATCTaGATCTTGAACTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRNSPMI*ILNLWS
Trigger: GCTCCACAAGTTCAAGATCAAGATCATGGGCGAGTT...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAAACTCGCCCATGATCTaGATCTTGAACTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLNSPMI*ILNLWS
Trigger: GCTCCACAAGTTCAAGATCAAGATCATGGGCGAGTT...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp GGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAACAAACTCGCCCATGATCTaGATCTTGAACTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: GALCIPLGSSSAQHGASTNSPMI*ILNLWS
Trigger: GCTCCACAAGTTCAAGATCAAGATCATGGGCGAGTT...TGTTGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTACGCTGGACATGGTCTaGTTCATGTTCCAATTCCAT +
Preference number: 5 (lower is better)
Translates to: SRLGPSLERHITAPSGNSTLDMV*FMFQFH
Trigger: ATGGAATTGGAACATGAACAAGACCATGTCCAGCGT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTACTCCAGAGTCCTAGGTaGGCCCATGAACCAGGAATT +
Preference number: 5 (lower is better)
Translates to: GPSLERHITAPSGNSDTVLQSPR*AHEPGI
Trigger: AATTCCTGGTTCATGGGCCAACCTAGGACTCTGGAG...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp GGGAGTAGGCTAGACTGTGAGCTCCTTGAGGGGAGCGTTGTGCATTCCTCTGGGGAAAGGGCAGTCAGTTaGGCATTTGTGACGAGCAAA +
Preference number: 5 (lower is better)
Translates to: GSRLDCELLEGSVVHSSGERAVS*AFVTSK
Trigger: TTTGCTCGTCACAAATGCCAAACTGACTGCCCTTTC...CCCAGAGGAATGCACAACGCTCCCCTCAAGGAGCTCACAGTCTAGCCTACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR CAA 90 bp CAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGCTCAAACCTTTCTTCTaGTCCTTGTCCTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: QMEMLRPCCSQLPVVAVELKPFF*SLSFLR
Trigger: CCTGAGGAAGGACAAGGACAAGAAGAAAGGTTTGAG...CTCAACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CAA 90 bp GCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCCGAGAGTCAGATACATTaGGAACACTATCTCCTAGGT +
Preference number: 5 (lower is better)
Translates to: AAHSFQWWPLSALCLLPSESQIH*EHYLLG
Trigger: ACCTAGGAGATAGTGTTCCAAATGTATCTGACTCTC...GGAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS TCA 90 bp CTAACATTAAAAACCATGGTCTCCAGTTCCATGCCCTGGTGGTCCTaGGCTGGCCCCATGTGTTGGAGCTGCTGCCTCAGAGGAATCCTT +
Preference number: 5 (lower is better)
Translates to: LTLKTMVSSSMPWWS*AGPMCWSCCLRGIL
Trigger: AAGGATTCCTCTGAGGCAGCAGCTCCAACACATGGGGCCAGCTCAGGACCACCAGGGCATGGAACTGGAGACCATGGTTTTTAATGTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378719.7
ENST00000481030.1
CDS GCA 90 bp CTTGTGCAACCAACGAGCAGGATGCGCAGTTTAGGCTGGGATTCCTaGAATAGAAAAGCGGAGCTCGACGGTCAAGGCGTCAGATTGCAA +
Preference number: 5 (lower is better)
Translates to: LVQPTSRMRSLGWDS*NRKAELDGQGVRLQ
Trigger: TTGCAATCTGACGCCTTGACCGTCGAGCTCCGCTTTTCTATTGCAGGAATCCCAGCCTAAACTGCGCATCCTGCTCGTTGGTTGCACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414594.5
CDS-3UTR CAA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTAGCACAGACAACAGCTTaGGGCTGCTGTTCCATTTAC +
Preference number: 5 (lower is better)
Translates to: GPSLERHITAPSGNSDTVAQTTA*GCCSIY
Trigger: GTAAATGGAACAGCAGCCCAAAGCTGTTGTCTGTGC...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTATATGCAGGATTTGCTaGGGAGTCTTAATTGGAGTC +
Preference number: 5 (lower is better)
Translates to: SRLGPSLERHITAPSGNSICRIC*GVLIGV
Trigger: GACTCCAATTAAGACTCCCAAGCAAATCCTGCATAT...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAATATGCAGGATTTGCTaGGGAGTCTTAATTGGAGTC +
Preference number: 5 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAICRIC*GVLIGV
Trigger: GACTCCAATTAAGACTCCCAAGCAAATCCTGCATAT...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp TCCCGGCTGGGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTTCAACACTGACATTCTaGGTGGCTTGTAAACCAACA +
Preference number: 5 (lower is better)
Translates to: SRLGPSLERHITAPSGNSSTLTF*VACKPT
Trigger: TGTTGGTTTACAAGCCACCAAGAATGTCAGTGTTGA...ACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCCCAGCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp TTAGGCCCGCAGGCAGCCAGCCACGAGTATGGCCTTTCAGTATGCCTGGGGTGCAGCATCAGTTTTCAATaGCAACCAGATACGGACTTA +
Preference number: 5 (lower is better)
Translates to: LGPQAASHEYGLSVCLGCSISFQ*QPDTDL
Trigger: TAAGTCCGTATCTGGTTGCAATTGAAAACTGATGCT...GCACCCCAGGCATACTGAAAGGCCATACTCGTGGCTGGCTGCCTGCGGGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp TGCTGCTCACAGCTTCCAGTGGTGGCCGTTGAGTGCCCTCTGCCTCCTTCCTTCACCATGCATTTAGCCTaGCGAGAGTCAGATACATTT +
Preference number: 5 (lower is better)
Translates to: CCSQLPVVAVECPLPPSFTMHLA*RESDTF
Trigger: AAATGTATCTGACTCTCGCAAGGCTAAATGCATGGT...GAAGGAAGGAGGCAGAGGGCACTCAACGGCCACCACTGGAAGCTGTGAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS CCA 90 bp CTTCGGCATGGCTCAGCAAGGAGGCTACTGGCCGTTTTTACAAGATaGGGAGATATCACTCTGACAGAGACCTTGAGCCTCATTTGGGTG +
Preference number: 5 (lower is better)
Translates to: LRHGSARRLLAVFTR*GDITLTETLSLIWV
Trigger: CACCCAAATGAGGCTCAAGGTCTCTGTCAGAGTGATATCTCCCCATCTTGTAAAAACGGCCAGTAGCCTCCTTGCTGAGCCATGCCGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492490.1
CDS-3UTR CAA 90 bp TTTTTGGTCCCGGAGTGGAAGCTCAGCTTGGCCACAGGATGGGCATTAAGCCTCGTCTCGAAGGTCGTGTaGAAGAGTGTGTTCATCAGT +
Preference number: 5 (lower is better)
Translates to: FLVPEWKLSLATGWALSLVSKVV*KSVFIS
Trigger: ACTGATGAACACACTCTTCAACACGACCTTCGAGAC...GAGGCTTAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp AGTATGCCTGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCAGGAATAATGTTCACCTaGCTGTCTAGTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: SMPGVRPAGHNGRMAKSAGIMFT*LSSFFM
Trigger: CATGAAGAAACTAGACAGCAAGGTGAACATTATTCC...TGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCAGGCATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp TGGGGTGCGACCCGCAGGCCACAATGGACGAATGGCCAAGTCTGCATACTCCAGGGAATAATGTTCACCTaGCTGTCTAGTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: WGATRRPQWTNGQVCILQGIMFT*LSSFFM
Trigger: CATGAAGAAACTAGACAGCAAGGTGAACATTATTCC...CTGGAGTATGCAGACTTGGCCATTCGTCCATTGTGGCCTGCGGGTCGCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp TTTTTGGTCCCGGAGTGGAAGCTCAGCTTGGCCACAGGATGGGCATTAAGCCTCAACTCGCCCATGATCTaGATCTTGAACTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: FLVPEWKLSLATGWALSLNSPMI*ILNLWS
Trigger: GCTCCACAAGTTCAAGATCAAGATCATGGGCGAGTT...GAGGCTTAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp ACTGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTAGCAGCCTTCCGGCGATaGAAGGCGTTGGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TVSLRKLATVAKLQSFVLAAFRR*KALVSS
Trigger: GGAGGAGACCAACGCCTTCAATCGCCGGAAGGCTGC...TAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp AGGGGAGCGTTGTGCATTCCTCTGGGTAGCTCCAGTGCCCAGCACGGTGCTTCAAGCATCAGTTTTCAATaGCAACCAGATACGGACTTA +
Preference number: 5 (lower is better)
Translates to: RGALCIPLGSSSAQHGASSISFQ*QPDTDL
Trigger: TAAGTCCGTATCTGGTTGCAATTGAAAACTGATGCT...TGAAGCACCGTGCTGGGCACTGGAGCTACCCAGAGGAATGCACAACGCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp TGTTTCATTACGAAAACTGGCCACCGTTGCCAAGTTGCAGAGTTTCGTCTTATGAGCTGGCCCCATGTGTaGGAGCTGCTGCCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: CFITKTGHRCQVAEFRLMSWPHV*ELLPQR
Trigger: CCTCTGAGGCAGCAGCTCCAACACATGGGGCCAGCT...CATAAGACGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTCGTAATGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS TCA 90 bp ATTCGCCAGGGTCGGAGGCCTCAGGAGGTTCTGTATCCTTCTCACTaGCAATCTATACAAAAGCAGCTCCCAAATCCTCTGAAACCCCGT +
Preference number: 5 (lower is better)
Translates to: IRQGRRPQEVLYPSH*QSIQKQLPNPLKPR
Trigger: ACGGGGTTTCAGAGGATTTGGGAGCTGCTTTTGTATAGATTGTCAGTGAGAAGGATACAGAACCTCCTGAGGCCTCCGACCCTGGCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378699.6
CDS-3UTR CAA 90 bp TGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTTCGCTAGGAATAATGTTCACCTaGCTGTCTAGTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: CHLHAEQLGLASRLGPSLGIMFT*LSSFFM
Trigger: CATGAAGAAACTAGACAGCAAGGTGAACATTATTCC...TAGCGAAGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp GGGCACCACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGGGAATAATGTTCACCTaGCTGTCTAGTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: GHHVSCHLHAEQLGLASRGIMFT*LSSFFM
Trigger: CATGAAGAAACTAGACAGCAAGGTGAACATTATTCC...CCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTGGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp CACGTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGGGAATAATGTTCACCTaGCTGTCTAGTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: HVSCHLHAEQLGLASRLGGIMFT*LSSFFM
Trigger: CATGAAGAAACTAGACAGCAAGGTGAACATTATTCC...CCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCACGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS-3UTR CAA 90 bp GTGAGTTGCCATCTCCACGCTGAACAATTAGGCCTAGCATCCCGGCTGGGGCCTAGCATCAGTTTTCAATaGCAACCAGATACGGACTTA +
Preference number: 5 (lower is better)
Translates to: VSCHLHAEQLGLASRLGPSISFQ*QPDTDL
Trigger: TAAGTCCGTATCTGGTTGCAATTGAAAACTGATGCT...AGGCCCCAGCCGGGATGCTAGGCCTAATTGTTCAGCGTGGAGATGGCAACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTTCCTGGAAACTCCCCTaGGCGGCGGCGGCGGGAGAA +
Preference number: 5 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFSWKLP*AAAAGE
Trigger: TTCTCCCGCCGCCGCCGCCAAGGGGAGTTTCCAGGA...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS-3UTR CAA 90 bp CACATGCACCACAGTGAGGTGACGCACAAGGCTCATGACATACGGAAGAGTGAAATCTTGATCTTGAACTaGTGGAGCTCGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: HMHHSEVTHKAHDIRKSEILILN*WSSLLE
Trigger: CTCCAAGAGCGAGCTCCACAAGTTCAAGATCAAGAT...TTCACTCTTCCGTATGTCATGAGCCTTGTGCGTCACCTCACTGTGGTGCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp GGGCCTTCGCTAGAGCGGCACATAACAGCTCCGTCAGGGAATAGTGACACTGTATCAACACTGACATTCTaGGTGGCTTGTAAACCAACA +
Preference number: 5 (lower is better)
Translates to: GPSLERHITAPSGNSDTVSTLTF*VACKPT
Trigger: TGTTGGTTTACAAGCCACCAAGAATGTCAGTGTTGA...TACAGTGTCACTATTCCCTGACGGAGCTGTTATGTGCCGCTCTAGCGAAGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp AACATTAAAAACCATGGTCTCCAGTTCCATGCCCTGGTGGTCCTGAGCTGGCCCAGGGTTGGGCAACATTaGATGTTCCCTGATGGAAAT +
Preference number: 5 (lower is better)
Translates to: NIKNHGLQFHALVVLSWPRVGQH*MFPDGN
Trigger: ATTTCCATCAGGGAACATCAAATGTTGCCCAACCCT...GGGCCAGCTCAGGACCACCAGGGCATGGAACTGGAGACCATGGTTTTTAATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp TTTTTGGTCCCGGAGTGGAAGCTCAGCTTGGCCACAGGATGGGCATTAAGCCTCGGAATAATGTTCACCTaGCTGTCTAGTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: FLVPEWKLSLATGWALSLGIMFT*LSSFFM
Trigger: CATGAAGAAACTAGACAGCAAGGTGAACATTATTCC...GAGGCTTAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTCCGGGACCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp TTACAGATGGAGATGCTGAGGCCATGCTGCTCACAGCTTCCAGTGGTGGCCGTTGGAATAATGTTCACCTaGCTGTCTAGTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: LQMEMLRPCCSQLPVVAVGIMFT*LSSFFM
Trigger: CATGAAGAAACTAGACAGCAAGGTGAACATTATTCC...AACGGCCACCACTGGAAGCTGTGAGCAGCATGGCCTCAGCATCTCCATCTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CAA 90 bp AAGGGCAGTCAGTTTGGCATTTGTGACGAGCAAAGCAGAGAATTCACCTCAGTTCTCCAGAGTCCTAGGTaGGCCCATGAACCAGGAATT +
Preference number: 5 (lower is better)
Translates to: KGSQFGICDEQSREFTSVLQSPR*AHEPGI
Trigger: AATTCCTGGTTCATGGGCCAACCTAGGACTCTGGAG...AACTGAGGTGAATTCTCTGCTTTGCTCGTCACAAATGCCAAACTGACTGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR CAA 90 bp AAGGGCAGTCAGTTTGGCATTTGTGACGAGCAAAGCAGAGAATTCACCTCAGTTGATTTCTTCTTGTCCTaGTCCTTCCTCAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: KGSQFGICDEQSREFTSVDFFLS*SFLRGC
Trigger: GCAGCCCCTGAGGAAGGACAAGGACAAGAAGAAATC...AACTGAGGTGAATTCTCTGCTTTGCTCGTCACAAATGCCAAACTGACTGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS CCA 90 bp GCTGGAAGACATCTGCTGCTTAACCAGGTGGCTATGGATGTGAGCTaGATTCTGAGAGCTGATCCAACTCAAACCTTTCTTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: AGRHLLLNQVAMDVS*ILRADPTQTFLLVL
Trigger: AAGGACAAGAAGAAAGGTTTGAGTTGGATCAGCTCTCAGAATCCAGCTCACATCCATAGCCACCTGGTTAAGCAGCAGATGTCTTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CAA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACATATGCAGGATTTGCTaGGGAGTCTTAATTGGAGTC +
Preference number: 5 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNICRIC*GVLIGV
Trigger: GACTCCAATTAAGACTCCCAAGCAAATCCTGCATAT...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp GAGGTGTTTACAGAGTCTACCCTAAACTCGTTTGTGCCTTTGGAACAGCTGTTTGAAAACTGGCCACCGTaGCCAAGTTGCAGAGTTTCG +
Preference number: 5 (lower is better)
Translates to: EVFTESTLNSFVPLEQLFENWPP*PSCRVS
Trigger: CGAAACTCTGCAACTTGGCAACGGTGGCCAGTTTTC...AAACAGCTGTTCCAAAGGCACAAACGAGTTTAGGGTAGACTCTGTAAACACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp AATGGACGAATGGCCAAGTCTGCATACTCCAGAGTCCTAGGTTGGCCCATGAACGGAATAATGTTCACCTaGCTGTCTAGTTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: NGRMAKSAYSRVLGWPMNGIMFT*LSSFFM
Trigger: CATGAAGAAACTAGACAGCAAGGTGAACATTATTCC...GTTCATGGGCCAACCTAGGACTCTGGAGTATGCAGACTTGGCCATTCGTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp CCAAATCAAACAGAAGCAAAAGACAGCAAGATGGACACCGTGAAAGGGCAGTCAATCTTGATCTTGAACTaGTGGAGCTCGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: PNQTEAKDSKMDTVKGQSILILN*WSSLLE
Trigger: CTCCAAGAGCGAGCTCCACAAGTTCAAGATCAAGAT...TGACTGCCCTTTCACGGTGTCCATCTTGCTGTCTTTTGCTTCTGTTTGATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378706.5
CDS-3UTR CAA 90 bp GGTCATATCAAGAACTCTCCTCTAGTCCAGAACCCATTTTACAGATGGAGATGCCCCATGATCTTGATCTaGAACTTGTGGAGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: GHIKNSPLVQNPFYRWRCPMILI*NLWSSL
Trigger: GAGCGAGCTCCACAAGTTCAAGATCAAGATCATGGG...GCATCTCCATCTGTAAAATGGGTTCTGGACTAGAGGAGAGTTCTTGATATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS-3UTR CAA 90 bp CACATGCACCACAGTGAGGTGACGCACAAGGCTCATGACATACGGAAGAGTGAATTCAGAATGGAAACATaGTCATCTAGGTACTTTCCG +
Preference number: 5 (lower is better)
Translates to: HMHHSEVTHKAHDIRKSEFRMET*SSRYFP
Trigger: CGGAAAGTACCTAGATGACAATGTTTCCATTCTGAA...TTCACTCTTCCGTATGTCATGAGCCTTGTGCGTCACCTCACTGTGGTGCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp GGTCATATCAAGAACTCTCCTCTAGTCCAGAACCCATTTTACAGATGGAGATGCATCTTGATCTTGAACTaGTGGAGCTCGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GHIKNSPLVQNPFYRWRCILILN*WSSLLE
Trigger: CTCCAAGAGCGAGCTCCACAAGTTCAAGATCAAGAT...GCATCTCCATCTGTAAAATGGGTTCTGGACTAGAGGAGAGTTCTTGATATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS TCA 90 bp GCCCAGCCTCTGAATCTGTTCCTCATGTATTTAAACTTACTTAACTaGCATACGACCCCCTCTCCAATGGGAATAAAACACCCGAGTCTA +
Preference number: 5 (lower is better)
Translates to: AQPLNLFLMYLNLLN*HTTPSPMGIKHPSL
Trigger: TAGACTCGGGTGTTTTATTCCCATTGGAGAGGGGGTCGTATGTCAGTTAAGTAAGTTTAAATACATGAGGAACAGATTCAGAGGCTGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453480.5
CDS-3UTR CAA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTTCCACAATGGTCAGCTaGAGCTGCACGTTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFSTMVS*SCTLLS
Trigger: GGAGAGCAACGTGCAGCTCAAGCTGACCATTGTGGA...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp CAACACAGTTCCACCAGACTCCCACTTCTAAAGGACATTAAATTAACTTTACAAACTGGGACCTCTATATaGGGACGCCGCTGGACTTCT +
Preference number: 5 (lower is better)
Translates to: QHSSTRLPLLKDIKLTLQTGTSI*GRRWTS
Trigger: AGAAGTCCAGCGGCGTCCCAATATAGAGGTCCCAGT...TTGTAAAGTTAATTTAATGTCCTTTAGAAGTGGGAGTCTGGTGGAACTGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp AGTATGTTTCTATTTTTCAGAATGGAAACATTGTCATCTAGGTACTTTCCGCTCGAGTGGAAGCTCAGCTaGGCCACAGGATGGGCATTA +
Preference number: 5 (lower is better)
Translates to: SMFLFFRMETLSSRYFPLEWKLS*ATGWAL
Trigger: TAATGCCCATCCTGTGGCCAAGCTGAGCTTCCACTC...GAGCGGAAAGTACCTAGATGACAATGTTTCCATTCTGAAAAATAGAAACATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp TTTTTCAGAATGGAAACATTGTCATCTAGGTACTTTCCGCTCATAACGATGATGCCCATGATCTTGATCTaGAACTTGTGGAGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: FFRMETLSSRYFPLITMMPMILI*NLWSSL
Trigger: GAGCGAGCTCCACAAGTTCAAGATCAAGATCATGGG...CATCATCGTTATGAGCGGAAAGTACCTAGATGACAATGTTTCCATTCTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS-3UTR CAA 90 bp CACCTACACACAATCCTTATTGAAGCTTTAGACCATATTGATCTGGCACTTAAAACGCCGCTGGACTTCTaGACTATAGTGAGTAAGGAG +
Preference number: 5 (lower is better)
Translates to: HLHTILIEALDHIDLALKTPLDF*TIVSKE
Trigger: CTCCTTACTCACTATAGTCAAGAAGTCCAGCGGCGT...TTTAAGTGCCAGATCAATATGGTCTAAAGCTTCAATAAGGATTGTGTGTAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378719.7
CDS TCA 90 bp CCGGTACATAAATTCCAATTTATAATACGGGGCGAAGTGAATCTCTaGGTAGCCCAGCCTCTGAATCTGTTCCTCATGTATTTAAACTTA +
Preference number: 5 (lower is better)
Translates to: PVHKFQFIIRGEVNL*VAQPLNLFLMYLNL
Trigger: TAAGTTTAAATACATGAGGAACAGATTCAGAGGCTGGGCTACTCAGAGATTCACTTCGCCCCGTATTATAAATTGGAATTTATGTACCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453480.5
CDS-3UTR CAA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTACGCTGGACATGGTCTaGTTCATGTTCCAATTCCAT +
Preference number: 5 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFTLDMV*FMFQFH
Trigger: ATGGAATTGGAACATGAACAAGACCATGTCCAGCGT...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS-3UTR CAA 90 bp AATCTTCAGGGCCCCTTCCAAGACCCTGTACCTAATTTTATATTAACATTGTTTAGCATCAGTTTTCAATaGCAACCAGATACGGACTTA +
Preference number: 5 (lower is better)
Translates to: NLQGPFQDPVPNFILTLFSISFQ*QPDTDL
Trigger: TAAGTCCGTATCTGGTTGCAATTGAAAACTGATGCT...AAACAATGTTAATATAAAATTAGGTACAGGGTCTTGGAAGGGGCCCTGAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000448933.5
ENST00000620483.4
CDS GCA 72 bp CCCGTCGGATCCGGGAGAGGCCGCGGCAGCCTAGTCTaGGGGTGTCTTGGGCCCCACCTGATGCTCCGGCCG +
Preference number: 6 (lower is better)
Translates to: PVGSGRGRGSLV*GCLGPHLMLRP
Trigger: CGGCCGGAGCATCAGGTGGGGCCCAAGACACCCGCAGACTAGGCTGCCGCGGCCTCTCCCGGATCCGACGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378699.6
ENST00000448933.5
CDS CCA 72 bp GATGGTGCGAGAAGCGCTCCAGGTCGGTGGCCGCCATaGCGAGCTCCGCACCGGGCGGGTGGGCTGGGACGA +
Preference number: 6 (lower is better)
Translates to: DGARSAPGRWPP*RAPHRAGGLGR
Trigger: TCGTCCCAGCCCACCCGCCCGGTGCGGAGCTCGCCATGGCGGCCACCGACCTGGAGCGCTTCTCGCACCATC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492490.1
CDS CCA 72 bp CTGCATTCGAGAAGCGCTCCAGGTCGGTGGCCGCCATaGCGAGCTCCGCACCGGGCGGGTGGGCTGGGACGA +
Preference number: 6 (lower is better)
Translates to: LHSRSAPGRWPP*RAPHRAGGLGR
Trigger: TCGTCCCAGCCCACCCGCCCGGTGCGGAGCTCGCCATGGCGGCCACCGACCTGGAGCGCTTCTCGAATGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000378719.7
ENST00000378721.8
ENST00000458488.2
ENST00000481794.5
ENST00000620483.4
CDS CCA 72 bp GCTCTGGCTCTGCATTCGAGAAGCGCTCCAGGTCGGTaGCCGCCATGGCGAGCTCCGCACCGGGCGGGTGGG +
Preference number: 6 (lower is better)
Translates to: ALALHSRSAPGR*PPWRAPHRAGG
Trigger: CCCACCCGCCCGGTGCGGAGCTCGCCATGGCGGCCACCGACCTGGAGCGCTTCTCGAATGCAGAGCCAGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296873.11
ENST00000378701.5
ENST00000378706.5
ENST00000378719.7
ENST00000378721.8
ENST00000458488.2
ENST00000481794.5
ENST00000620483.4
CDS GCA 72 bp CGGGGCTCTGGCTCTGCATTCAGAGTGTGGACAAGCTaGGGGAGACCCGTCGGATCCGGGAGAGGCCGCGGC +
Preference number: 6 (lower is better)
Translates to: RGSGSAFRVWTS*GRPVGSGRGRG
Trigger: GCCGCGGCCTCTCCCGGATCCGACGGGTCTCCCGCAGCTTGTCCACACTCTGAATGCAGAGCCAGAGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378699.6
ENST00000448933.5
CDS CCA 72 bp CGGCTGCGGCTGAATGGATCCAATATGGCCACTTCCTaGAAACTCCCCTTGGCGGCGGCGGCGGGAGAAGCC +
Preference number: 6 (lower is better)
Translates to: RLRLNGSNMATS*KLPLAAAAGEA
Trigger: GGCTTCTCCCGCCGCCGCCGCCAAGGGGAGTTTCCAGGAAGTGGCCATATTGGATCCATTCAGCCGCAGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS CCA 72 bp TGCGGGACGCGCTCCGCCCGGGCGGCTGCGGCTGAATaGATCCAATATGGCCACTTCCTGGAAACTCCCCTT +
Preference number: 6 (lower is better)
Translates to: CGTRSARAAAAE*IQYGHFLETPL
Trigger: AAGGGGAGTTTCCAGGAAGTGGCCATATTGGATCCATTCAGCCGCAGCCGCCCGGGCGGAGCGCGTCCCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296873.11
ENST00000378706.5
ENST00000620483.4
CDS TCA 72 bp TGCCTCAGAGGAATCCTTCCCTCCACGTCGCATCCCTaGCCAGGCAGCTGCAGCACTGTATGGCGGGCCACC +
Preference number: 6 (lower is better)
Translates to: CLRGILPSTSHP*PGSCSTVWRAT
Trigger: GGTGGCCCGCCATACAGTGCTGCAGCTGCCTGGTCAGGGATGCGACGTGGAGGGAAGGATTCCTCTGAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378719.7
ENST00000481030.1
CDS GCA 72 bp CCAGGCAGCTGCAGCACTGTATGGCGGGCCACCAGCTaGTGCAGTTCAAGGGCTCCACACTGGCCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: PGSCSTVWRATS*CSSRAPHWPWS
Trigger: TGACCAAGGCCAGTGTGGAGCCCTTGAACTGCAGCAGCTGGTGGCCCGCCATACAGTGCTGCAGCTGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378719.7
ENST00000481030.1
CDS GCA 72 bp CTGGAGGTCATAGGTCTGGGGCCGCAGGCGCACGCATaGCTCATGGTGACTGGCTTCCTCAGTCTCGAAGGT +
Preference number: 6 (lower is better)
Translates to: LEVIGLGPQAHA*LMVTGFLSLEG
Trigger: ACCTTCGAGACTGAGGAAGCCAGTCACCATGAGGCATGCGTGCGCCTGCGGCCCCAGACCTATGACCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000296873.11
ENST00000371478.2
ENST00000371493.7
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000378719.7
ENST00000378721.8
ENST00000414594.5
ENST00000448933.5
ENST00000453480.5
ENST00000458488.2
ENST00000481794.5
ENST00000620483.4
CDS GCA 72 bp CTCGGACCAGCTTGTTCCCCACCTTCACCTCCTCGGTaGTGCCCACCACGGCAAAGGGCAGATGTGCATTCA +
Preference number: 6 (lower is better)
Translates to: LGPACSPPSPPR*CPPRQRADVHS
Trigger: TGAATGCACATCTGCCCTTTGCCGTGGTGGGCAGCACCGAGGAGGTGAAGGTGGGGAACAAGCTGGTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296873.11
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000378719.7
ENST00000378721.8
ENST00000448933.5
ENST00000458488.2
ENST00000620483.4
CDS TCA 72 bp GGGCCGCCCTTCCCGCCTCTTGCCTCTCATCCTTATTaGTCTGATCCCCAAAGCCCACGGCATCCACAATGG +
Preference number: 6 (lower is better)
Translates to: GPPFPPLASHPY*SDPQSPRHPQW
Trigger: CCATTGTGGATGCCGTGGGCTTTGGGGATCAGATCAATAAGGATGAGAGGCAAGAGGCGGGAAGGGCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481794.5
CDS CCA 72 bp CATGGTCTCCAGTTCCATGCCCTGGTGGTCCTGAGCTaGCCCCATGTGTTGGAGCTGCTGCCTCAGAGGAAT +
Preference number: 6 (lower is better)
Translates to: HGLQFHALVVLS*PHVLELLPQRN
Trigger: ATTCCTCTGAGGCAGCAGCTCCAACACATGGGGCCAGCTCAGGACCACCAGGGCATGGAACTGGAGACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378719.7
ENST00000481030.1
CDS CAA 72 bp TGCTCACATGTGCCCTGGGAGCTGCACGGGCATCTCTaGCTCAGCTCCCGTTTTTCTTCGGCATGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: CSHVPWELHGHL*LSSRFSSAWLS
Trigger: GCTGAGCCATGCCGAAGAAAAACGGGAGCTGAGCAAGAGATGCCCGTGCAGCTCCCAGGGCACATGTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492490.1
CDS TCA 72 bp AAAACCATGGTCTCCAGTTCCATGCCCTGGTGGTCCTaGGCTGGCCCCATGTGTTGGAGCTGCTGCCTCAGA +
Preference number: 6 (lower is better)
Translates to: KTMVSSSMPWWS*AGPMCWSCCLR
Trigger: TCTGAGGCAGCAGCTCCAACACATGGGGCCAGCTCAGGACCACCAGGGCATGGAACTGGAGACCATGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378719.7
ENST00000481030.1
CDS GCA 72 bp GCTGCCCCCTGGCCTTTTCTTTCTGGGAACAGCTTCTaGCTGAGATCCCTGACTGGATACAGGCAGCTGACC +
Preference number: 6 (lower is better)
Translates to: AAPWPFLSGNSF*LRSLTGYRQLT
Trigger: GGTCAGCTGCCTGTATCCAGTCAGGGATCTCAGGCAGAAGCTGTTCCCAGAAAGAAAAGGCCAGGGGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481794.5
CDS CAA 90 bp GATTCCTGCAATAGAAAAGCGGAGCTCGACGGTCAAGGCGTCAGATaGCAAGTGTCCATCACCCTGCCTGTCCCAAGGGCTTGGGACAAC +
Preference number: 6 (lower is better)
Translates to: DSCNRKAELDGQGVR*QVSITLPVPRAWDN
Trigger: GTTGTCCCAAGCCCTTGGGACAGGCAGGGTGATGGACACTTGCAATCTGACGCCTTGACCGTCGAGCTCCGCTTTTCTATTGCAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414594.5
CDS GCA 72 bp ATAGAAAAGCGGAGCTCGACGGTCAAGGCGTCAGATTaGAAGTGTCCATCACCCTGCCTGTCCCAAGGGCTT +
Preference number: 6 (lower is better)
Translates to: IEKRSSTVKASD*KCPSPCLSQGL
Trigger: AAGCCCTTGGGACAGGCAGGGTGATGGACACTTGCAATCTGACGCCTTGACCGTCGAGCTCCGCTTTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414594.5
CDS CAA 72 bp AATAGAAAAGCGGAGCTCGACGGTCAAGGCGTCAGATaGCAAGTGTCCATCACCCTGCCTGTCCCAAGGGCT +
Preference number: 6 (lower is better)
Translates to: NRKAELDGQGVR*QVSITLPVPRA
Trigger: AGCCCTTGGGACAGGCAGGGTGATGGACACTTGCAATCTGACGCCTTGACCGTCGAGCTCCGCTTTTCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414594.5
CDS CCA 72 bp CTTGTGCAACCAACGAGCAGGATGCGCAGTTTAGGCTaGGATTCCTGCAATAGAAAAGCGGAGCTCGACGGT +
Preference number: 6 (lower is better)
Translates to: LVQPTSRMRSLG*DSCNRKAELDG
Trigger: ACCGTCGAGCTCCGCTTTTCTATTGCAGGAATCCCAGCCTAAACTGCGCATCCTGCTCGTTGGTTGCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414594.5
CDS CCA 72 bp GGAGATATCACTCTGACAGAGACCTTGAGCCTCATTTaGGTGCGGGCTCTCAATTCCTGCTTCAGGAGGGAC +
Preference number: 6 (lower is better)
Translates to: GDITLTETLSLI*VRALNSCFRRD
Trigger: GTCCCTCCTGAAGCAGGAATTGAGAGCCCGCACCCAAATGAGGCTCAAGGTCTCTGTCAGAGTGATATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492490.1
CDS CCA 72 bp GGGCATCTCTTGCTCAGCTCCCGTTTTTCTTCGGCATaGCTCAGCAAGGAGGCTACTGGCCGTTTTTACAAG +
Preference number: 6 (lower is better)
Translates to: GHLLLSSRFSSA*LSKEATGRFYK
Trigger: CTTGTAAAAACGGCCAGTAGCCTCCTTGCTGAGCCATGCCGAAGAAAAACGGGAGCTGAGCAAGAGATGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000492490.1
CDS CCA 72 bp GGCTCAGCAAGGAGGCTACTGGCCGTTTTTACAAGATaGGGAGATATCACTCTGACAGAGACCTTGAGCCTC +
Preference number: 6 (lower is better)
Translates to: GSARRLLAVFTR*GDITLTETLSL
Trigger: GAGGCTCAAGGTCTCTGTCAGAGTGATATCTCCCCATCTTGTAAAAACGGCCAGTAGCCTCCTTGCTGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492490.1
CDS CAA 72 bp CCCCTTCTCCAGACACCTAAAGGAGTAACTGGTCTGTaGGTGACCACAGAGCCTCAGATATTCCCCAAGAGG +
Preference number: 6 (lower is better)
Translates to: PLLQTPKGVTGL*VTTEPQIFPKR
Trigger: CCTCTTGGGGAATATCTGAGGCTCTGTGGTCACCAACAGACCAGTTACTCCTTTAGGTGTCTGGAGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481794.5
CDS CAA 90 bp CTGGCCGTTTTTACAAGATGGGGAGATATCACTCTGACAGAGACCTaGAGCCTCATTTGGGTGCGGGCTCTCAATTCCTGCTTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LAVFTRWGDITLTET*SLIWVRALNSCFRR
Trigger: CCTCCTGAAGCAGGAATTGAGAGCCCGCACCCAAATGAGGCTCAAGGTCTCTGTCAGAGTGATATCTCCCCATCTTGTAAAAACGGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492490.1
CDS CAA 90 bp TACAAGATGGGGAGATATCACTCTGACAGAGACCTTGAGCCTCATTaGGGTGCGGGCTCTCAATTCCTGCTTCAGGAGGGACTAGGTACT +
Preference number: 6 (lower is better)
Translates to: YKMGRYHSDRDLEPH*GAGSQFLLQEGLGT
Trigger: AGTACCTAGTCCCTCCTGAAGCAGGAATTGAGAGCCCGCACCCAAATGAGGCTCAAGGTCTCTGTCAGAGTGATATCTCCCCATCTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492490.1
CDS CCA 72 bp TTGCAAGTGTCCATCACCCTGCCTGTCCCAAGGGCTTaGGACAACGTCTTAATGGTTCCACCATTGTGCAAA +
Preference number: 6 (lower is better)
Translates to: LQVSITLPVPRA*DNVLMVPPLCK
Trigger: TTTGCACAATGGTGGAACCATTAAGACGTTGTCCCAAGCCCTTGGGACAGGCAGGGTGATGGACACTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414594.5
CDS CAA 72 bp ATTGCAAGTGTCCATCACCCTGCCTGTCCCAAGGGCTaGGGACAACGTCTTAATGGTTCCACCATTGTGCAA +
Preference number: 6 (lower is better)
Translates to: IASVHHPACPKG*GQRLNGSTIVQ
Trigger: TTGCACAATGGTGGAACCATTAAGACGTTGTCCCAAGCCCTTGGGACAGGCAGGGTGATGGACACTTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414594.5
CDS TCA 72 bp CATGGTGACTGGCTTCCTCAGTCTCGAAGGTCGTGTTaGAGAGTGTGTTCATCAGTGTGGATTTGCCAATGC +
Preference number: 6 (lower is better)
Translates to: HGDWLPQSRRSC*RVCSSVWICQC
Trigger: GCATTGGCAAATCCACACTGATGAACACACTCTTCAACACGACCTTCGAGACTGAGGAAGCCAGTCACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000296873.11
ENST00000371478.2
ENST00000371493.7
ENST00000378699.6
ENST00000378701.5
ENST00000378706.5
ENST00000378719.7
ENST00000378721.8
ENST00000414594.5
ENST00000448933.5
ENST00000453480.5
ENST00000458488.2
ENST00000481794.5
ENST00000620483.4
CDS TCA 72 bp GGTCGGAGGCCTCAGGAGGTTCTGTATCCTTCTCACTaGCAATCTATACAAAAGCAGCTCCCAAATCCTCTG +
Preference number: 6 (lower is better)
Translates to: GRRPQEVLYPSH*QSIQKQLPNPL
Trigger: CAGAGGATTTGGGAGCTGCTTTTGTATAGATTGTCAGTGAGAAGGATACAGAACCTCCTGAGGCCTCCGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378699.6
CDS CAA 72 bp TTTACAAGATGGGGAGATATCACTCTGACAGAGACCTaGAGCCTCATTTGGGTGCGGGCTCTCAATTCCTGC +
Preference number: 6 (lower is better)
Translates to: FTRWGDITLTET*SLIWVRALNSC
Trigger: GCAGGAATTGAGAGCCCGCACCCAAATGAGGCTCAAGGTCTCTGTCAGAGTGATATCTCCCCATCTTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492490.1
CDS CCA 72 bp CATCTGCTGCTTAACCAGGTGGCTATGGATGTGAGCTaGATTCTGAGAGCTGATCCAACTCAAACCTTTCTT +
Preference number: 6 (lower is better)
Translates to: HLLLNQVAMDVS*ILRADPTQTFL
Trigger: AAGAAAGGTTTGAGTTGGATCAGCTCTCAGAATCCAGCTCACATCCATAGCCACCTGGTTAAGCAGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378721.8
CDS TCA 72 bp AAATTCCAATTTATAATACGGGGCGAAGTGAATCTCTaGGTAGCCCAGCCTCTGAATCTGTTCCTCATGTAT +
Preference number: 6 (lower is better)
Translates to: KFQFIIRGEVNL*VAQPLNLFLMY
Trigger: ATACATGAGGAACAGATTCAGAGGCTGGGCTACTCAGAGATTCACTTCGCCCCGTATTATAAATTGGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453480.5
CDS TCA 72 bp CTGAATCTGTTCCTCATGTATTTAAACTTACTTAACTaGCATACGACCCCCTCTCCAATGGGAATAAAACAC +
Preference number: 6 (lower is better)
Translates to: LNLFLMYLNLLN*HTTPSPMGIKH
Trigger: GTGTTTTATTCCCATTGGAGAGGGGGTCGTATGTCAGTTAAGTAAGTTTAAATACATGAGGAACAGATTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453480.5