Pregenerated sensors for SEPTIN7 (Homo sapiens)
Ensembl gene IDs: ENSG00000122545Ensembl transcript IDs: ENST00000350320.10, ENST00000399034.7, ENST00000399035.7, ENST00000425198.1, ENST00000435235.6, ENST00000473201.2, ENST00000635172.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCCTGGAGGGCAGGAGGACTGCTTaGGCCCAGAGGGTTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: DIHRPNGKKNLLIYLSLEGRRTA*AQRVEA Trigger: AGCCTCAACCCTCTGGGCTCAAGCAGTCCTCCTGCC...CTCCAGGCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| 3UTR-3UTR TCA 90 bp | GACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCCTGGAGTTGAGCCCAGAGGGTTaGGGCTGCAGTCAAGTCGTG | + |
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Preference number: 2 (lower is better) Translates to: DIHRPNGKKNLLIYLSLELSPEG*GCSQVV Trigger: CACGACTTGACTGCAGCCTCAACCCTCTGGGCTCAA...CTCCAGGCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| 3UTR-3UTR TCA 90 bp | TTCTCAGACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCGGCAGGAGGACTGCTTaGGCCCAGAGGGTTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FSDIHRPNGKKNLLIYLSGRRTA*AQRVEA Trigger: AGCCTCAACCCTCTGGGCTCAAGCAGTCCTCCTGCC...GCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTCTGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| 3UTR-3UTR GCA 90 bp | GACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCCTGGAGGTCAAGTCGTGTTTGTaGCACCGCACTCCAGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: DIHRPNGKKNLLIYLSLEVKSCL*HRTPAW Trigger: CCAGGCTGGAGTGCGGTGGCACAAACACGACTTGAC...CTCCAGGCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| 3UTR-3UTR GCA 90 bp | TTCTCAGACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCGTCAAGTCGTGTTTGTaGCACCGCACTCCAGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FSDIHRPNGKKNLLIYLSVKSCL*HRTPAW Trigger: CCAGGCTGGAGTGCGGTGGCACAAACACGACTTGAC...GCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTCTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| 3UTR-3UTR GCA 90 bp | TTCTCAGACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCGTGGTGGTGCACGCCTaGAATCCCAGATACTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: FSDIHRPNGKKNLLIYLSVVVHA*NPRYSG Trigger: CCCTGAGTATCTGGGATTGCAGGCGTGCACCACCAC...GCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTCTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| 3UTR-3UTR GCA 90 bp | GACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCCTGGAGGAAAATCAGCACATATaGATTCTAAATGAGACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: DIHRPNGKKNLLIYLSLEENQHI*ILNETS Trigger: GCTTGTCTCATTTAGAATGCATATGTGCTGATTTTC...CTCCAGGCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| 3UTR-3UTR GCA 90 bp | TTCTCAGACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCGAAAATCAGCACATATaGATTCTAAATGAGACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: FSDIHRPNGKKNLLIYLSENQHI*ILNETS Trigger: GCTTGTCTCATTTAGAATGCATATGTGCTGATTTTC...GCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTCTGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| 3UTR-3UTR CAA 90 bp | TTCTCAGACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCCTTGAGCCCAGAGGGTaGAGGCTGCAGTCAAGTCGT | + |
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Preference number: 3 (lower is better) Translates to: FSDIHRPNGKKNLLIYLSLEPRG*RLQSSR Trigger: ACGACTTGACTGCAGCCTCAACCCTCTGGGCTCAAG...GCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTCTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| CDS-3UTR GCA 90 bp | TTCTCAGACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCGCCGCCCGGCGTAGCTaGCTTGCTTACGCACGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSDIHRPNGKKNLLIYLSAARRS*LAYARY Trigger: GTAGCGTGCGTAAGCAAGGCAGCTACGCCGGGCGGC...GCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTCTGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000350320.10 ENST00000399034.7 |
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| CDS-3UTR CCA 90 bp | GACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCCTGGAGGGGCCTAGCGGAGGCTaGCTTCCATCTCGCGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: DIHRPNGKKNLLIYLSLEGPSGG*LPSREI Trigger: AATCTCGCGAGATGGAAGCCAGCCTCCGCTAGGCCC...CTCCAGGCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399034.7 |
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| CDS-3UTR GCA 90 bp | GACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCCTGGAGGTGGTGGTGCACGCCTaGAATCCCAGATACTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: DIHRPNGKKNLLIYLSLEVVVHA*NPRYSG Trigger: CCCTGAGTATCTGGGATTGCAGGCGTGCACCACCAC...CTCCAGGCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| CDS-3UTR TCA 90 bp | TTCTCAGACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCTTGAGCCCAGAGGGTTaGGGCTGCAGTCAAGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: FSDIHRPNGKKNLLIYLSLSPEG*GCSQVV Trigger: CACGACTTGACTGCAGCCTCAACCCTCTGGGCTCAA...GCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTCTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| CDS-3UTR GCA 90 bp | GACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCCTGGAGTCAAGGTTCTTCTGTTaGCATGGTGCTGCTGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DIHRPNGKKNLLIYLSLESRFFC*HGAAVD Trigger: GTCAACAGCAGCACCATGGCAACAGAAGAACCTTGA...CTCCAGGCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399034.7 |
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| CDS-3UTR GCA 90 bp | GACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCCTGGAGTTCATCTCAAACACCTaGTCCATCTCCATCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: DIHRPNGKKNLLIYLSLEFISNT*SISISI Trigger: GATGGAGATGGAGATGGAGCAGGTGTTTGAGATGAA...CTCCAGGCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| CDS-3UTR GCA 90 bp | TTCTCAGACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCTTCATCTCAAACACCTaGTCCATCTCCATCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FSDIHRPNGKKNLLIYLSFISNT*SISISI Trigger: GATGGAGATGGAGATGGAGCAGGTGTTTGAGATGAA...GCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTCTGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| CDS GCA 90 bp | CAAAGGCGCCTACGCCGATTCCGCAGCGTAGCCGCCCGGCGTAGCTaGCTTGCTTACGCACGCTACAGCAGGCGGACTCCTCCACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRRLRRFRSVAARRS*LAYARYSRRTPPQA Trigger: AGCCTGTGGAGGAGTCCGCCTGCTGTAGCGTGCGTAAGCAAGGCAGCTACGCCGGGCGGCTACGCTGCGGAATCGGCGTAGGCGCCTTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000435235.6 ENST00000635172.1 |
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| CDS-3UTR CAA 90 bp | TTCTCAGACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCCCCGGCGTAGCTGCCTaGCTTACGCACGCTACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSDIHRPNGKKNLLIYLSPGVAA*LTHATA Trigger: TGCTGTAGCGTGCGTAAGCAAGGCAGCTACGCCGGG...GCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTCTGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000350320.10 ENST00000399034.7 |
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| CDS-3UTR CAA 90 bp | GACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCCTGGAGCTTGAGCCCAGAGGGTaGAGGCTGCAGTCAAGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: DIHRPNGKKNLLIYLSLELEPRG*RLQSSR Trigger: ACGACTTGACTGCAGCCTCAACCCTCTGGGCTCAAG...CTCCAGGCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| CDS GCA 90 bp | CTTGTAGGGCTGTGGTGTGCACTAGACAACACAATAAATGAAAGTTaGTTGGTGCTGTGGCTGATGTACTGTGCTGCTAGCTGTGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVGLWCALDNTINES*LVLWLMYCAASCAP Trigger: TGGGGCACAGCTAGCAGCACAGTACATCAGCCACAGCACCAAGCAACTTTCATTTATTGTGTTGTCTAGTGCACACCACAGCCCTACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425198.1 |
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| CDS-3UTR CAA 90 bp | GACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCCTGGAGTTCAAGGTTCTTCTGTaGCTGACCCATGGTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: DIHRPNGKKNLLIYLSLEFKVLL*LTHGAA Trigger: AGCAGCACCATGGGTCAGCAACAGAAGAACCTTGAA...CTCCAGGCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000350320.10 |
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| CDS TCA 90 bp | CCAGCCTTTCTGAATTTCTTACAATTCCTTGAAAGCATCATACTTTaGCATCTGGCCACAGGCTACTACCTTAGCTGGAACACCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: PAFLNFLQFLESIIL*HLATGYYLSWNTLL Trigger: GAGGAGGGTGTTCCAGCTAAGGTAGTAGCCTGTGGCCAGATGTCAAAGTATGATGCTTTCAAGGAATTGTAAGAAATTCAGAAAGGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS GCA 90 bp | GCATATTTCTATGTGCTGACAACACTTAGTGTGCTGTACCATAACTaGCTGCCTGCATACAGATGGGTCCTCACTAACTATGGTTCCACT | + |
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Preference number: 5 (lower is better) Translates to: AYFYVLTTLSVLYHN*LPAYRWVLTNYGST Trigger: AGTGGAACCATAGTTAGTGAGGACCCATCTGTATGCAGGCAGGCAGTTATGGTACAGCACACTAAGTGTTGTCAGCACATAGAAATATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS TCA 90 bp | TGGGAATCCTTCTCTAACCTTGAGACTAGGCATATTTCTATGTGCTaGCAACACTTAGTGTGCTGTACCATAACTGCCTGCCTGCATACA | + |
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Preference number: 5 (lower is better) Translates to: WESFSNLETRHISMC*QHLVCCTITACLHT Trigger: TGTATGCAGGCAGGCAGTTATGGTACAGCACACTAAGTGTTGTCAGCACATAGAAATATGCCTAGTCTCAAGGTTAGAGAAGGATTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS-3UTR CAA 90 bp | TTCTCAGACATCCACAGGCCAAATGGCAAAAAGAACCTTCTGATATACCTAAGCCTGTGCCCACTTAACTaGCTTGTGAACCTGATATGG | + |
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Preference number: 5 (lower is better) Translates to: FSDIHRPNGKKNLLIYLSLCPLN*LVNLIW Trigger: CCATATCAGGTTCACAAGCAAGTTAAGTGGGCACAG...GCTTAGGTATATCAGAAGGTTCTTTTTGCCATTTGGCCTGTGGATGTCTGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000399035.7 |
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| CDS TCA 90 bp | TCCCAAGTTGAGGAGCATCTGTATTTGTTTCTCCCATCTTCTCACTaGAATACCCTCTACAGCGAGGGCCTTATCTCAATTTATCTGTAT | + |
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Preference number: 5 (lower is better) Translates to: SQVEEHLYLFLPSSH*NTLYSEGLISIYLY Trigger: ATACAGATAAATTGAGATAAGGCCCTCGCTGTAGAGGGTATTTCAGTGAGAAGATGGGAGAAACAAATACAGATGCTCCTCAACTTGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS TCA 90 bp | CAATCTGGCTGCTGCCTCCAGTTTGCCTCTGTACTTTCAAGAAGGTaGCTAAATACTTCTATCATGGTGCTTACCATTACTTATTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: QSGCCLQFASVLSRR*LNTSIMVLTITYSL Trigger: GAGAGAATAAGTAATGGTAAGCACCATGATAGAAGTATTTAGTCACCTTCTTGAAAGTACAGAGGCAAACTGGAGGCAGCAGCCAGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS TCA 90 bp | CTATTAAACGTATCTTCAACTTCAACAGGTAACCCTGTCCCAAGTTaGGGAGCATCTGTATTTGTTTCTCCCATCTTCTCACTGAAATAC | + |
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Preference number: 5 (lower is better) Translates to: LLNVSSTSTGNPVPS*GASVFVSPIFSLKY Trigger: GTATTTCAGTGAGAAGATGGGAGAAACAAATACAGATGCTCCTCAACTTGGGACAGGGTTACCTGTTGAAGTTGAAGATACGTTTAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS GCA 90 bp | TCAACATCCCTTTTATTCATTACAATCTGGCTGCTGCCTCCAGTTTaGCTCTGTACTTTCAAGAAGGTGACTAAATACTTCTATCATGGT | + |
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Preference number: 5 (lower is better) Translates to: STSLLFITIWLLPPV*LCTFKKVTKYFYHG Trigger: ACCATGATAGAAGTATTTAGTCACCTTCTTGAAAGTACAGAGGCAAACTGGAGGCAGCAGCCAGATTGTAATGAATAAAAGGGATGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS TCA 90 bp | CTCTTCCAACTCCACATTCAGTTCTTGCTACCAACTATCTTTCTCTaGCAAGATGCTCACAAGATAATCTTCAACATCCCTTTTATTCAT | + |
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Preference number: 5 (lower is better) Translates to: LFQLHIQFLLPTIFL*QDAHKIIFNIPFIH Trigger: ATGAATAAAAGGGATGTTGAAGATTATCTTGTGAGCATCTTGTCAGAGAAAGATAGTTGGTAGCAAGAACTGAATGTGGAGTTGGAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS GCA 90 bp | ACTCCACATTCAGTTCTTGCTACCAACTATCTTTCTCTGACAAGATaGTCACAAGATAATCTTCAACATCCCTTTTATTCATTACAATCT | + |
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Preference number: 5 (lower is better) Translates to: TPHSVLATNYLSLTR*SQDNLQHPFYSLQS Trigger: AGATTGTAATGAATAAAAGGGATGTTGAAGATTATCTTGTGAGCATCTTGTCAGAGAAAGATAGTTGGTAGCAAGAACTGAATGTGGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS CCA 72 bp | GCCCCCTCAGACGAGGCTTCCGGGCCTAGCGGAGGCTaGCTTCCATCTCGCGAGATTACCGCCTCCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: APSDEASGPSGG*LPSREITASPA Trigger: AGCTGGGGAGGCGGTAATCTCGCGAGATGGAAGCCAGCCTCCGCTAGGCCCGGAAGCCTCGTCTGAGGGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000399034.7 ENST00000635172.1 |
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| CDS GCA 72 bp | CTACGCCGATTCCGCAGCGTAGCCGCCCGGCGTAGCTaGCTTGCTTACGCACGCTACAGCAGGCGGACTCCT | + |
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Preference number: 6 (lower is better) Translates to: LRRFRSVAARRS*LAYARYSRRTP Trigger: AGGAGTCCGCCTGCTGTAGCGTGCGTAAGCAAGGCAGCTACGCCGGGCGGCTACGCTGCGGAATCGGCGTAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000350320.10 ENST00000399034.7 ENST00000435235.6 ENST00000635172.1 |
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| CDS GCA 72 bp | TTGAGGCAAAGTCTTGATCTGTCGCCCAGGCGGGAGTaGAGTGACGTGATCTCAGTTCAGTGCAACCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: LRQSLDLSPRRE*SDVISVQCNLR Trigger: GCGGAGGTTGCACTGAACTGAGATCACGTCACTGCACTCCCGCCTGGGCGACAGATCAAGACTTTGCCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425198.1 |
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| CDS CCA 72 bp | GCTCACCATAGCCTCCAATTCTTCCACTTTGACTCCTaGGTAGCTAGGACTACAGAGTGCACCCCCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AHHSLQFFHFDS*VARTTECTPRP Trigger: GGGCCTGGGGGTGCACTCTGTAGTCCTAGCTACCCAGGAGTCAAAGTGGAAGAATTGGAGGCTATGGTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS CAA 90 bp | GTAGGGCTGTGGTGTGCACTAGACAACACAATAAATGAAAGTTGCTaGGTGCTGTGGCTGATGTACTGTGCTGCTAGCTGTGCCCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: VGLWCALDNTINESC*VLWLMYCAASCAPN Trigger: GTTTGGGGCACAGCTAGCAGCACAGTACATCAGCCACAGCACCAAGCAACTTTCATTTATTGTGTTGTCTAGTGCACACCACAGCCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425198.1 |
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| CDS TCA 72 bp | TGTAGGGCTGTGGTGTGCACTAGACAACACAATAAATaGAAGTTGCTTGGTGCTGTGGCTGATGTACTGTGC | + |
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Preference number: 6 (lower is better) Translates to: CRAVVCTRQHNK*KLLGAVADVLC Trigger: GCACAGTACATCAGCCACAGCACCAAGCAACTTTCATTTATTGTGTTGTCTAGTGCACACCACAGCCCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425198.1 |
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| CDS GCA 72 bp | CTGTGGTGTGCACTAGACAACACAATAAATGAAAGTTaGTTGGTGCTGTGGCTGATGTACTGTGCTGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: LWCALDNTINES*LVLWLMYCAAS Trigger: GCTAGCAGCACAGTACATCAGCCACAGCACCAAGCAACTTTCATTTATTGTGTTGTCTAGTGCACACCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425198.1 |
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| CDS CCA 72 bp | TCTTACAATTCCTTGAAAGCATCATACTTTGACATCTaGCCACAGGCTACTACCTTAGCTGGAACACCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SYNSLKASYFDI*PQATTLAGTPS Trigger: GGAGGGTGTTCCAGCTAAGGTAGTAGCCTGTGGCCAGATGTCAAAGTATGATGCTTTCAAGGAATTGTAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS CCA 72 bp | GTTCCAGGTTTGTGTTTACCCAGTGGATATGCTACCTaGGTGTTCCATGGGCTCCTTAAAATCAAAAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: VPGLCLPSGYAT*VFHGLLKIKSS Trigger: TGAGCTTTTGATTTTAAGGAGCCCATGGAACACCCAGGTAGCATATCCACTGGGTAAACACAAACCTGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS TCA 72 bp | GAGGAGCATCTGTATTTGTTTCTCCCATCTTCTCACTaGAATACCCTCTACAGCGAGGGCCTTATCTCAATT | + |
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Preference number: 6 (lower is better) Translates to: EEHLYLFLPSSH*NTLYSEGLISI Trigger: AATTGAGATAAGGCCCTCGCTGTAGAGGGTATTTCAGTGAGAAGATGGGAGAAACAAATACAGATGCTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS CAA 90 bp | GTGACTTGCCCAAGATTGCTAGCCAGAAAGTGGAAGAACCAGGACTaGAATAAGCCTCCTAATTCCAAGTTTAGAAAGCTAAGACAAGTG | + |
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Preference number: 6 (lower is better) Translates to: VTCPRLLARKWKNQD*NKPPNSKFRKLRQV Trigger: CACTTGTCTTAGCTTTCTAAACTTGGAATTAGGAGGCTTATTCAAGTCCTGGTTCTTCCACTTTCTGGCTAGCAATCTTGGGCAAGTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425198.1 |
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| CDS TCA 72 bp | GTATCTTCAACTTCAACAGGTAACCCTGTCCCAAGTTaGGGAGCATCTGTATTTGTTTCTCCCATCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: VSSTSTGNPVPS*GASVFVSPIFS Trigger: TGAGAAGATGGGAGAAACAAATACAGATGCTCCTCAACTTGGGACAGGGTTACCTGTTGAAGTTGAAGATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS TCA 72 bp | GTGAATGGCATTACAATCTTCCCCATTACTCAAGTGTaGAACCTAGGATTCCTCCCCTCCTCTAATCCTATT | + |
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Preference number: 6 (lower is better) Translates to: VNGITIFPITQV*NLGFLPSSNPI Trigger: AATAGGATTAGAGGAGGGGAGGAATCCTAGGTTTCACACTTGAGTAATGGGGAAGATTGTAATGCCATTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS TCA 72 bp | CTGAATTTCTTACAATTCCTTGAAAGCATCATACTTTaGCATCTGGCCACAGGCTACTACCTTAGCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LNFLQFLESIIL*HLATGYYLSWN Trigger: GTTCCAGCTAAGGTAGTAGCCTGTGGCCAGATGTCAAAGTATGATGCTTTCAAGGAATTGTAAGAAATTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS TCA 72 bp | TGCTGCCTCCAGTTTGCCTCTGTACTTTCAAGAAGGTaGCTAAATACTTCTATCATGGTGCTTACCATTACT | + |
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Preference number: 6 (lower is better) Translates to: CCLQFASVLSRR*LNTSIMVLTIT Trigger: AGTAATGGTAAGCACCATGATAGAAGTATTTAGTCACCTTCTTGAAAGTACAGAGGCAAACTGGAGGCAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS GCA 72 bp | AATCTTCAACATCCCTTTTATTCATTACAATCTGGCTaGTGCCTCCAGTTTGCCTCTGTACTTTCAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: NLQHPFYSLQSG*CLQFASVLSRR Trigger: CCTTCTTGAAAGTACAGAGGCAAACTGGAGGCAGCAGCCAGATTGTAATGAATAAAAGGGATGTTGAAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS CCA 72 bp | CTTATCTCAATTTATCTGTATCCTCAGCACCCAGCGTaGTATCTAACACTCAAGAAGGTGCCCAAATATTTG | + |
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Preference number: 6 (lower is better) Translates to: LISIYLYPQHPA*YLTLKKVPKYL Trigger: CAAATATTTGGGCACCTTCTTGAGTGTTAGATACCACGCTGGGTGCTGAGGATACAGATAAATTGAGATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS CCA 72 bp | CCATTTTCCCTCTTCTACGCTTCCTATCTCAGTGAATaGCATTACAATCTTCCCCATTACTCAAGTGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: PFSLFYASYLSE*HYNLPHYSSVK Trigger: TTTCACACTTGAGTAATGGGGAAGATTGTAATGCCATTCACTGAGATAGGAAGCGTAGAAGAGGGAAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS TCA 72 bp | CTCCACATTCAGTTCTTGCTACCAACTATCTTTCTCTaGCAAGATGCTCACAAGATAATCTTCAACATCCCT | + |
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Preference number: 6 (lower is better) Translates to: LHIQFLLPTIFL*QDAHKIIFNIP Trigger: AGGGATGTTGAAGATTATCTTGTGAGCATCTTGTCAGAGAAAGATAGTTGGTAGCAAGAACTGAATGTGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS GCA 72 bp | CTTTTATTCATTACAATCTGGCTGCTGCCTCCAGTTTaGCTCTGTACTTTCAAGAAGGTGACTAAATACTTC | + |
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Preference number: 6 (lower is better) Translates to: LLFITIWLLPPV*LCTFKKVTKYF Trigger: GAAGTATTTAGTCACCTTCTTGAAAGTACAGAGGCAAACTGGAGGCAGCAGCCAGATTGTAATGAATAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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| CDS CCA 72 bp | AAGGTACAGGTCACAATCTCACTCTTAAGAAACCCATaGGGTCAGATGCCTTTTGAAGTTCAACATTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: KVQVTISLLRNP*GQMPFEVQHFS Trigger: TGAAAAATGTTGAACTTCAAAAGGCATCTGACCCCATGGGTTTCTTAAGAGTGAGATTGTGACCTGTACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425198.1 |
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| CDS CAA 72 bp | TATGATCCAATTTCCACTGGGAATCCTTCTCTAACCTaGAGACTAGGCATATTTCTATGTGCTGACAACACT | + |
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Preference number: 6 (lower is better) Translates to: YDPISTGNPSLT*RLGIFLCADNT Trigger: AGTGTTGTCAGCACATAGAAATATGCCTAGTCTCAAGGTTAGAGAAGGATTCCCAGTGGAAATTGGATCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473201.2 |
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