RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEPTIN6 (Homo sapiens)

Ensembl gene IDs: ENSG00000125354

Ensembl transcript IDs: ENST00000343984.5, ENST00000354228.8, ENST00000354416.7, ENST00000360156.11, ENST00000394610.7, ENST00000460411.5, ENST00000467310.1, ENST00000481072.1, ENST00000489216.5

Found 688 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGTCTCCTGGACCCCGTTCCAGCCTTGCAGCATCACTGGGTCATTaGGTTAAGGAGCTGGCCCGGCATGCCTTCGTTTTGCCAGCCCTC +
Preference number: 1 (lower is better)
Translates to: QSPGPRSSLAASLGH*VKELARHAFVLPAL
Trigger: GAGGGCTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATGCTGCAAGGCTGGAACGGGGTCCAGGAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CCA 90 bp CCCGTTCCAGCCTTGCAGCATCACTGGGTCATTGGGTTAAGGAGCTaGCCCGGCATGCCTTCGTTTTGCCAGCCCTCACCCAATCCATCT +
Preference number: 1 (lower is better)
Translates to: PVPALQHHWVIGLRS*PGMPSFCQPSPNPS
Trigger: AGATGGATTGGGTGAGGGCTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATGCTGCAAGGCTGGAACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CCA 90 bp GAGGGGGACTGGGATGCAGGATGCATCTGCGAGCCACATGACTGTTaGCTTCTTGACCAGCGGCCAGACATCACCCTCAGATTCTCAGGT +
Preference number: 1 (lower is better)
Translates to: EGDWDAGCICEPHDC*LLDQRPDITLRFSG
Trigger: ACCTGAGAATCTGAGGGTGATGTCTGGCCGCTGGTCAAGAAGCCAACAGTCATGTGGCTCGCAGATGCATCCTGCATCCCAGTCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CCA 90 bp GTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGCAGCATCACTaGGTCATTGGGTTAAGGAGCTGGCCCGGCATGCCTTCGTTTTGC +
Preference number: 1 (lower is better)
Translates to: VTHSLLDPVPALQHH*VIGLRSWPGMPSFC
Trigger: GCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATGCTGCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CCA 90 bp TCTCTCTTCAGAGTCTGTGAGCCTCCAGCCTGGGAGCCCTGGGACTaGAGCAGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACT +
Preference number: 1 (lower is better)
Translates to: SLFRVCEPPAWEPWD*SSSAAVFLCLKAFT
Trigger: AGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCAGGCTGGAGGCTCACAGACTCTGAAGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR GCA 90 bp ATAAACCTTGGCAGGAAGAGAGGAGAGGGCGCGGGTTGGATTGTATaGCCCCCAGGCATGTTAAGGGGGAAATTAGAGAAAGGGAGGCCC +
Preference number: 1 (lower is better)
Translates to: INLGRKRGEGAGWIV*PPGMLRGKLEKGRP
Trigger: GGGCCTCCCTTTCTCTAATTTCCCCCTTAACATGCCTGGGGGGCATACAATCCAACCCGCGCCCTCTCCTCTCTTCCTGCCAAGGTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR GCA 90 bp CAAGGGGACAGCTGTGCTGATCGGTGGTTACCCAGCCATGGTGGTTaGAAATACCTCAGGGAAACTAACAGCAACCAGAACTGGAACAGG +
Preference number: 1 (lower is better)
Translates to: QGDSCADRWLPSHGG*KYLRETNSNQNWNR
Trigger: CCTGTTCCAGTTCTGGTTGCTGTTAGTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCACAGCTGTCCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR GCA 90 bp ACTCCATCTCTCACACTGTCACTGGCCAAACACCAAAGGCCACTGTaGCTCATAACCCTGACAAGGGAGGGCTCTCTACTTCACAGAGGT +
Preference number: 1 (lower is better)
Translates to: TPSLTLSLAKHQRPL*LITLTREGSLLHRG
Trigger: ACCTCTGTGAAGTAGAGAGCCCTCCCTTGTCAGGGTTATGAGGCACAGTGGCCTTTGGTGTTTGGCCAGTGACAGTGTGAGAGATGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR GCA 90 bp GCCTGGGAGCCCTGGGACTGGAGCAGCTCAGCCGCCGTCTTTCTTTaGTTGAAAGCATTCACTTCATCATCCAGGGATTTCTTCTTATCC +
Preference number: 1 (lower is better)
Translates to: AWEPWDWSSSAAVFL*LKAFTSSSRDFFLS
Trigger: GGATAAGAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR CCA 90 bp AGTGACTGGGATACAGGAGACCAAGGGGACAGCTGTGCTGATCGGTaGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGGAAACTAAC +
Preference number: 1 (lower is better)
Translates to: SDWDTGDQGDSCADR*LPSHGGCKYLRETN
Trigger: GTTAGTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCACAGCTGTCCCCTTGGTCTCCTGTATCCCAGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR TCA 90 bp GGGAGCCCTGGGACTGGAGCAGCTCAGCCGCCGTCTTTCTTTGCTTaGAAGCATTCACTTCATCATCCAGGGATTTCTTCTTATCCTCCA +
Preference number: 1 (lower is better)
Translates to: GSPGTGAAQPPSFFA*KHSLHHPGISSYPP
Trigger: TGGAGGATAAGAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR GCA 90 bp CACTGGGTCATTGGGTTAAGGAGCTGGCCCGGCATGCCTTCGTTTTaGCAGCCCTCACCCAATCCATCTTCAGATGTTTTTCTGTGGAAA +
Preference number: 1 (lower is better)
Translates to: HWVIGLRSWPGMPSF*QPSPNPSSDVFLWK
Trigger: TTTCCACAGAAAAACATCTGAAGATGGATTGGGTGAGGGCTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR TCA 90 bp GGAAGAGAGCTTCTTGCCTGGACACAGGGACACATGAACACTTGTTaGGTGGTGTGGTGTATGTGTGTGTGCTTGCAGTTTGAGGGGAGA +
Preference number: 1 (lower is better)
Translates to: GRELLAWTQGHMNTC*VVWCMCVCLQFEGR
Trigger: TCTCCCCTCAAACTGCAAGCACACACACATACACCACACCACTCAACAAGTGTTCATGTGTCCCTGTGTCCAGGCAAGAAGCTCTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR CCA 90 bp CCCACAGCTGAGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTaGTCCTGTAGTTGTTTCTCTGAGGTTACATTTCGTCCATTTTCC +
Preference number: 1 (lower is better)
Translates to: PTAEVSCPSHLHLGE*SCSCFSEVTFRPFS
Trigger: GGAAAATGGACGAAATGTAACCTCAGAGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR TCA 90 bp CATGTGAGTCAGGAAGAGAGCTTCTTGCCTGGACACAGGGACACATaGACACTTGTTGAGTGGTGTGGTGTATGTGTGTGTGCTTGCAGT +
Preference number: 1 (lower is better)
Translates to: HVSQEESFLPGHRDT*TLVEWCGVCVCACS
Trigger: ACTGCAAGCACACACACATACACCACACCACTCAACAAGTGTTCATGTGTCCCTGTGTCCAGGCAAGAAGCTCTCTTCCTGACTCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR TCA 90 bp AAGGCAGATTTACCAACATCAAAGCTCTCCCTCCAGATCCCAGGTTaGGCAGAAACCTCTCTCAAAACCCTAACTGGTCTCGGAAGGTGG +
Preference number: 1 (lower is better)
Translates to: KADLPTSKLSLQIPG*AETSLKTLTGLGRW
Trigger: CCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAGGTTTCTGCTCAACCTGGGATCTGGAGGGAGAGCTTTGATGTTGGTAAATCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR GCA 90 bp CCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTCCTaGCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTGTTTC +
Preference number: 1 (lower is better)
Translates to: PCEQNSTFIPTAEVS*PSHLHLGEWSCSCF
Trigger: GAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR CCA 90 bp CTTTCATACCCACAGCTGAGGTGTCCTGCCCCAGTCACTTACACTTaGGTGAGTGGTCCTGTAGTTGTTTCTCTGAGGTTACATTTCGTC +
Preference number: 1 (lower is better)
Translates to: LSYPQLRCPAPVTYT*VSGPVVVSLRLHFV
Trigger: GACGAAATGTAACCTCAGAGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTGTGGGTATGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR GCA 90 bp TTCCCAAGAAACTGGCTTGTGCTTTGGCAGCATCACCTTCATACTTaGTCTGGTCACTCACCAATCAATAGAGCACCAAACCTACACAGC +
Preference number: 1 (lower is better)
Translates to: FPRNWLVLWQHHLHT*SGHSPINRAPNLHS
Trigger: GCTGTGTAGGTTTGGTGCTCTATTGATTGGTGAGTGACCAGAGCAAGTATGAAGGTGATGCTGCCAAAGCACAAGCCAGTTTCTTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR GCA 90 bp TTGACAGCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTaGTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTTCCGGA +
Preference number: 1 (lower is better)
Translates to: LTAQFSSLQSGIYYS*YWPHLIGTVWSPSG
Trigger: TCCGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR TCA 90 bp AACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATaGAAATTAGTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCG +
Preference number: 1 (lower is better)
Translates to: NRLNPFVKLIGSQEA*KLVWLLPRNRSGTS
Trigger: CGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGACTAATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR CCA 90 bp GTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTaGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAAGTTGCA +
Preference number: 1 (lower is better)
Translates to: VGKWWLPVGCLSVNF*ESSSEAGHRIIKVA
Trigger: TGCAACTTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCACCACTTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR CCA 90 bp GCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTaGCCTCACCTTATTGGGACAGTATGGAGCCCTTCCGGAAATTAC +
Preference number: 1 (lower is better)
Translates to: AQFSSLQSGIYYSCY*PHLIGTVWSPSGNY
Trigger: GTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR TCA 90 bp AAAGCAGCTCTGAAGCTGGACATAGAATCATCAAAGTTGCAAATATaGAGCCTTTCCCAAGGAGACCTGACAGGCCTAACTCAGCATCTC +
Preference number: 1 (lower is better)
Translates to: KAALKLDIESSKLQI*SLSQGDLTGLTQHL
Trigger: GAGATGCTGAGTTAGGCCTGTCAGGTCTCCTTGGGAAAGGCTTCATATTTGCAACTTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR GCA 90 bp TTCTTCAGCAGTTGTGTTTTATGGGAAGGGCTTGGTGTAAATAAATaGGTTGCCGATTTTGAGCACAGCTTGAGTGCAGTTACTTCGAGT +
Preference number: 1 (lower is better)
Translates to: FFSSCVLWEGLGVNK*VADFEHSLSAVTSS
Trigger: ACTCGAAGTAACTGCACTCAAGCTGTGCTCAAAATCGGCAACGCATTTATTTACACCAAGCCCTTCCCATAAAACACAACTGCTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CCA 90 bp GAATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTaGGAGTCAGGAGGCATGAAAATTAGTCTGGCTTCTGCCTCGAAA +
Preference number: 1 (lower is better)
Translates to: ECNVYKQIESLCETD*ESGGMKISLASASK
Trigger: TTTCGAGGCAGAAGCCAGACTAATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR GCA 90 bp CACCAATCAATAGAGCACCAAACCTACACAGCAAACCTATATTCTTaGTTTGTCAACAAGAAAAGTGCGTGCATATGTTTGCTTTTCATT +
Preference number: 1 (lower is better)
Translates to: HQSIEHQTYTANLYS*FVNKKSACICLLFI
Trigger: AATGAAAAGCAAACATATGCACGCACTTTTCTTGTTGACAAAGCAAGAATATAGGTTTGCTGTGTAGGTTTGGTGCTCTATTGATTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR TCA 90 bp ATCTATAGAAGGTCTGCGAATGCTGAAGAAGATACAAATGTCACTTaGCTTTCTCTTGCATATTCAGAAATGTTTAACAGTGGCTGTAGA +
Preference number: 1 (lower is better)
Translates to: IYRRSANAEEDTNVT*LSLAYSEMFNSGCR
Trigger: TCTACAGCCACTGTTAAACATTTCTGAATATGCAAGAGAAAGTCAAGTGACATTTGTATCTTCTTCAGCATTCGCAGACCTTCTATAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR GCA 90 bp GGGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGGGAGCTGGCCCGGCATaGCTTCGTTTTGCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: GSPRAPVTHSLLDPVPALGAGPA*LRFASP
Trigger: AGGGCTGGCAAAACGAAGGCATGCCGGGCCAGCTCC...CAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp AAGGGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTAGCAGATGGGCCCCCTaGCCATGTCACACCTCTGGC +
Preference number: 2 (lower is better)
Translates to: KGHLGHLLHTVSWTPFQPSRWAP*PCHTSG
Trigger: GCCAGAGGTGTGACATGGTCAGGGGGCCCATCTGCT...AGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCGGGGGCCTCGCTGCCTaGCACCCCAAAGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: VWLLPRNRSGTSVKSLPFGGLAA*HPKGKL
Trigger: CAGCTTTCCTTTGGGGTGCCAGGCAGCGAGGCCCCC...GAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR CAA 90 bp CCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTaGCAGCATCACTGGGTCATTGGGTTAAGGAGCTGGCCCGGCATG +
Preference number: 2 (lower is better)
Translates to: PRAPVTHSLLDPVPA*QHHWVIGLRSWPGM
Trigger: CATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATGCTGCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp GGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGCGGCATGCCTTCGTTTTaGCAGCCCTCACCCAATCCA +
Preference number: 2 (lower is better)
Translates to: GHLGHLLHTVSWTPFQPCGMPSF*QPSPNP
Trigger: TGGATTGGGTGAGGGCTGGCAAAACGAAGGCATGCC...GCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp GCTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTTCCGGAAATTACCCCCAGGGGACAGCTGTGCTaGTCGGTGGTTACCCAGCCA +
Preference number: 2 (lower is better)
Translates to: ATGLTLLGQYGALPEITPRGQLC*SVVTQP
Trigger: TGGCTGGGTAACCACCGATCAGCACAGCTGTCCCCT...GGGGGTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGTACCGGGCGGCGGTGTaGGGAAGTGGTGGTTACCGG +
Preference number: 2 (lower is better)
Translates to: QMQMRAPPVCNANNYRAAYRAAV*GSGGYR
Trigger: CCGGTAACCACCACTTCCCCACACCGCCGCCCGGTA...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp GCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCTGGGACTGGGATGCAGGATaGATCTGCGAGCCACATGAC +
Preference number: 2 (lower is better)
Translates to: ASASKQKWDLGQVPSLLWDWDAG*ICEPHD
Trigger: GTCATGTGGCTCGCAGATGCATCCTGCATCCCAGTC...CCAGAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GTTAAGGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATGGGGGCCTCGCTGCCTaGCACCCCAAAGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: VKGLFFSPAESHLFLLGDGGLAA*HPKGKL
Trigger: CAGCTTTCCTTTGGGGTGCCAGGCAGCGAGGCCCCC...ATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCCTTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCAGAAGTAGGTGGTCATaGTCAGTGCCAGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: VWLLPRNRSGTSVKSLPFRSRWS*SVPVGL
Trigger: CAGCCCCACTGGCACTGACCATGACCACCTACTTCT...GAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGCGGTGTGGGGAAGTGGTaGTTACCGGTTGGTTGTTTA +
Preference number: 2 (lower is better)
Translates to: GHLGHLLHTVSWTPFQPCGVGKW*LPVGCL
Trigger: TAAACAACCAACCGGTAACCACCACTTCCCCACACC...GCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCGCCTCGAAACAGAAGTaGGACCTCGGTCAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: LASASKQKWDLGQVPSLLASKQK*DLGQVP
Trigger: AGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGC...GAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCTGGAACAGCAACCAGAACTaGAACAGGGGAGCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: ASASKQKWDLGQVPSLLWNSNQN*NRGAGG
Trigger: CCCACCAGCTCCCCTGTTCCAGTTCTGGTTGCTGTT...CCAGAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp GGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGCCAAGAAACTGGCTTGTaGTTTGGCAGCATCACCTTC +
Preference number: 2 (lower is better)
Translates to: GHLGHLLHTVSWTPFQPCQETGL*FGSITF
Trigger: GAAGGTGATGCTGCCAAAGCACAAGCCAGTTTCTTG...GCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp GTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCGATGCAGGATGCATCTaGGAGCCACATGACTGTTGG +
Preference number: 2 (lower is better)
Translates to: VWLLPRNRSGTSVKSLPFDAGCI*EPHDCW
Trigger: CCAACAGTCATGTGGCTCGCAGATGCATCCTGCATC...GAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGTGCTGGGAGGGGGACTaGGATGCAGGATGCATCTGC +
Preference number: 2 (lower is better)
Translates to: QMQMRAPPVCNANNYRAACWEGD*DAGCIC
Trigger: GCAGATGCATCCTGCATCCCAGTCCCCCTCCCAGCA...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp CTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCGTACACAAATGCAAATaGGGGCGCCTCCGGTTTGTA +
Preference number: 2 (lower is better)
Translates to: LASASKQKWDLGQVPSLLVHKCK*GRLRFV
Trigger: TACAAACCGGAGGCGCCCTCATTTGCATTTGTGTAC...GAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp GGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGCCAAAGGCTGTCCTTTTaGAACCCTCTAAGAAATGGC +
Preference number: 2 (lower is better)
Translates to: GHLGHLLHTVSWTPFQPCQRLSF*NPLRNG
Trigger: GCCATTTCTTAGAGGGTTTCAAAAGGACAGCCTTTG...GCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GTTTATTCTCCCTTTTGCATCTGTGGGATACCCAGAGTTAGAGAGAGGGGAAACGGGGGCCTCGCTGCCTaGCACCCCAAAGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: VYSPFCICGIPRVRERGNGGLAA*HPKGKL
Trigger: CAGCTTTCCTTTGGGGTGCCAGGCAGCGAGGCCCCC...GTTTCCCCTCTCTCTAACTCTGGGTATCCCACAGATGCAAAAGGGAGAATAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGAGAAGTAGGTGGTCATaGTCAGTGCCAGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKRSRWS*SVPVGL
Trigger: CAGCCCCACTGGCACTGACCATGACCACCTACTTCT...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GGACCAGGGAGGACTAGTGACTGGGATACAGGAGACCAAGGGGACAGCTGTGCTGGTTTCTATAAACCTTaGCAGGAAGAGAGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: GPGRTSDWDTGDQGDSCAGFYKP*QEERRG
Trigger: CCCTCTCCTCTCTTCCTGCCAAGGTTTATAGAAACC...AGCACAGCTGTCCCCTTGGTCTCCTGTATCCCAGTCACTAGTCCTCCCTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GCAAATATGAAGCCTTTCCCAAGGAGACCTGACAGGCCTAACTCAGCATCTCTCTGCTGGGAGGGGGACTaGGATGCAGGATGCATCTGC +
Preference number: 2 (lower is better)
Translates to: ANMKPFPRRPDRPNSASLCWEGD*DAGCIC
Trigger: GCAGATGCATCCTGCATCCCAGTCCCCCTCCCAGCA...GAGAGATGCTGAGTTAGGCCTGTCAGGTCTCCTTGGGAAAGGCTTCATATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp GGACTGGAGCAGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCGGACCCTGGGTCTCATaGAGCATGCAGCAAACAGCA +
Preference number: 2 (lower is better)
Translates to: GLEQLSRRLSLLESIHFIGPWVS*SMQQTA
Trigger: TGCTGTTTGCTGCATGCTGCATGAGACCCAGGGTCC...GATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR-3UTR GCA 90 bp CAGCTGAGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTAGGAAGAGAGCTTCTTaGCTGGACACAGGGACACAT +
Preference number: 2 (lower is better)
Translates to: QLRCPAPVTYTWVSGPVVRKRAS*LDTGTH
Trigger: ATGTGTCCCTGTGTCCAGGCAAGAAGCTCTCTTCCT...AACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR CCA 90 bp TGCTCTGGTCACTCACCAATCAATAGAGCACCAAACCTACACAGCAAACCTATATACCGGGCGGCGGTGTaGGGAAGTGGTGGTTACCGG +
Preference number: 2 (lower is better)
Translates to: CSGHSPINRAPNLHSKPIYRAAV*GSGGYR
Trigger: CCGGTAACCACCACTTCCCCACACCGCCGCCCGGTA...TATAGGTTTGCTGTGTAGGTTTGGTGCTCTATTGATTGGTGAGTGACCAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp TGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGTACCGGGCGGCGGTGTaGGGAAGTGGTGGTTACCGG +
Preference number: 2 (lower is better)
Translates to: CTQMQMRAPPVCNANNYRYRAAV*GSGGYR
Trigger: CCGGTAACCACCACTTCCCCACACCGCCGCCCGGTA...CCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GCTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTTCCGGAAATTACCCCCTCTAAGAAATGGCTGTaGCTCCTGAGGATGAGGGTG +
Preference number: 2 (lower is better)
Translates to: ATGLTLLGQYGALPEITPSKKWL*LLRMRV
Trigger: CACCCTCATCCTCAGGAGCCACAGCCATTTCTTAGA...GGGGGTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CAA 90 bp TCACTGGGTCATTGGGTTAAGGAGCTGGCCCGGCATGCCTTCGTTTaGCCAGCCCTCACCCAATCCATCTTCAGATGTTTTTCTGTGGAA +
Preference number: 2 (lower is better)
Translates to: SLGHWVKELARHAFV*PALTQSIFRCFSVE
Trigger: TTCCACAGAAAAACATCTGAAGATGGATTGGGTGAGGGCTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CAA 90 bp TGGGAGCCCTGGGACTGGAGCAGCTCAGCCGCCGTCTTTCTTTGCTaGAAAGCATTCACTTCATCATCCAGGGATTTCTTCTTATCCTCC +
Preference number: 2 (lower is better)
Translates to: WEPWDWSSSAAVFLC*KAFTSSSRDFFLSS
Trigger: GGAGGATAAGAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR CAA 90 bp AGCCTGGGAGCCCTGGGACTGGAGCAGCTCAGCCGCCGTCTTTCTTaGCTTGAAAGCATTCACTTCATCATCCAGGGATTTCTTCTTATC +
Preference number: 2 (lower is better)
Translates to: SLGALGLEQLSRRLS*LESIHFIIQGFLLI
Trigger: GATAAGAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR-3UTR TCA 90 bp GGGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGTACTCCACTGTAACTTaGATTTTCCCAAGAAACTGG +
Preference number: 2 (lower is better)
Translates to: GSPRAPVTHSLLDPVPALYSTVT*IFPRNW
Trigger: CCAGTTTCTTGGGAAAATTCAAGTTACAGTGGAGTA...CAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTAGGGGACAGCTGTGCTaGTCGGTGGTTACCCAGCCA +
Preference number: 2 (lower is better)
Translates to: WLPVGCLSVNFWESSSEARGQLC*SVVTQP
Trigger: TGGCTGGGTAACCACCGATCAGCACAGCTGTCCCCT...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp GCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCTGGGAGGCAGGAGCAAGTTaGGGAACTCAAAAAGAAGAA +
Preference number: 2 (lower is better)
Translates to: ASASKQKWDLGQVPSLLWEAGAS*GTQKEE
Trigger: TTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTC...CCAGAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp CTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCCATCACCTTCATACTTaGTCTGGTCACTCACCAATC +
Preference number: 2 (lower is better)
Translates to: LASASKQKWDLGQVPSLLHHLHT*SGHSPI
Trigger: GATTGGTGAGTGACCAGAGCAAGTATGAAGGTGATG...GAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGCTCTCACACTGTCACTaGCCAAACACCAAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: QMQMRAPPVCNANNYRAALSHCH*PNTKGH
Trigger: GTGGCCTTTGGTGTTTGGCCAGTGACAGTGTGAGAG...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp CAGCTGAGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTTCCATTTTCCAGCTCTaGTGGTTCTTTTCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: QLRCPAPVTYTWVSGPVVSIFQL*WFFSCL
Trigger: AAGGCAGGAAAAGAACCATCAGAGCTGGAAAATGGA...AACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR TCA 90 bp ACCCTGGGTCTCATGCAGCATGCAGCAAACAGCAGAGTTAATTTTTCTTCTCTTTCTCTTCAGAGTCTGTaGGCCTCCAGCCTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: TLGLMQHAANSRVNFSSLSLQSL*ASSLGA
Trigger: GGCTCCCAGGCTGGAGGCTCACAGACTCTGAAGAGA...AAGAGAAGAAAAATTAACTCTGCTGTTTGCTGCATGCTGCATGAGACCCAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR-3UTR GCA 90 bp CAAAACCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTCCTGCCGGACCCTGGGTCTCATaGAGCATGCAGCAAACAGCA +
Preference number: 2 (lower is better)
Translates to: QNLVNRTVLSYPQLRCPAGPWVS*SMQQTA
Trigger: TGCTGTTTGCTGCATGCTGCATGAGACCCAGGGTCC...GGCAGGACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR GCA 90 bp AAGGAAAAGGCGCCAAAGGCTGTCCTTTTGAAACCCTCTAAGAAATGGCTGTGGGCGGGTTGGATTGTATaGCCCCCAGGCATGTTAAGG +
Preference number: 2 (lower is better)
Translates to: KEKAPKAVLLKPSKKWLWAGWIV*PPGMLR
Trigger: CCTTAACATGCCTGGGGGGCATACAATCCAACCCGC...CCACAGCCATTTCTTAGAGGGTTTCAAAAGGACAGCCTTTGGCGCCTTTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp ATTCAGTACACAGCCATGGATTACTGCAAAGGAAGGGCAGAGAGACGGCATGTTGACTGGGATGCAGGATaGATCTGCGAGCCACATGAC +
Preference number: 2 (lower is better)
Translates to: IQYTAMDYCKGRAERRHVDWDAG*ICEPHD
Trigger: GTCATGTGGCTCGCAGATGCATCCTGCATCCCAGTC...AACATGCCGTCTCTCTGCCCTTCCTTTGCAGTAATCCATGGCTGTGTACTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp CATCACTGGGTCATTGGGTTAAGGAGCTGGCCCGGCATGCCTTCGTTTTGCCAGGTTTATTCTCCCTTTTaGATCTGTGGGATACCCAGA +
Preference number: 2 (lower is better)
Translates to: HHWVIGLRSWPGMPSFCQVYSPF*ICGIPR
Trigger: TCTGGGTATCCCACAGATGCAAAAGGGAGAATAAAC...CTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp AGATCATTGCCAGGTCAACTCCATCTCTCACACTGTCACTGGCCAAACACCAAAGAGGCCCAGCTCTGTTaGGCAGGAAAAGGGTGTCTA +
Preference number: 2 (lower is better)
Translates to: RSLPGQLHLSHCHWPNTKEAQLC*AGKGCL
Trigger: TAGACACCCTTTTCCTGCGCAACAGAGCTGGGCCTC...TTTGGTGTTTGGCCAGTGACAGTGTGAGAGATGGAGTTGACCTGGCAATGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394610.7
3UTR-3UTR CCA 90 bp AGATCATTGCCAGGTCAACTCCATCTCTCACACTGTCACTGGCCAAACACCAAAGCCTCGAAACAGAAGTaGGACCTCGGTCAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: RSLPGQLHLSHCHWPNTKASKQK*DLGQVP
Trigger: AGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGC...TTTGGTGTTTGGCCAGTGACAGTGTGAGAGATGGAGTTGACCTGGCAATGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp AGATCATTGCCAGGTCAACTCCATCTCTCACACTGTCACTGGCCAAACACCAAAGAACAGGGGAGCTGGTaGGAAAGAGTAGCAGATGGG +
Preference number: 2 (lower is better)
Translates to: RSLPGQLHLSHCHWPNTKEQGSW*ERVADG
Trigger: CCCATCTGCTACTCTTTCCCACCAGCTCCCCTGTTC...TTTGGTGTTTGGCCAGTGACAGTGTGAGAGATGGAGTTGACCTGGCAATGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CAA 90 bp CAAGGCAGATTTACCAACATCAAAGCTCTCCCTCCAGATCCCAGGTaGAGCAGAAACCTCTCTCAAAACCCTAACTGGTCTCGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: QGRFTNIKALPPDPR*SRNLSQNPNWSRKV
Trigger: CACCTTCCGAGACCAGTTAGGGTTTTGAGAGAGGTTTCTGCTCAACCTGGGATCTGGAGGGAGAGCTTTGATGTTGGTAAATCTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR TCA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATACTCCTCCTTAGTTTCTaGAGGTCTCTCCAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMILLLSF*RSLQGC
Trigger: ACAGCCTTGGAGAGACCTTCAGAAACTAAGGAGGAG...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp ATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACAGCAGATGGGCCCCCTaGCCATGTCACACCTCTGGC +
Preference number: 2 (lower is better)
Translates to: ICTQMQMRAPPVCNANNYSRWAP*PCHTSG
Trigger: GCCAGAGGTGTGACATGGTCAGGGGGCCCATCTGCT...GTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGGAGGCAGGAGCAAGTTaGGGAACTCAAAAAGAAGAA +
Preference number: 2 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKEAGAS*GTQKEE
Trigger: TTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTC...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGCGGGTTGGATTGTATaGCCCCCAGGCATGTTAAGG +
Preference number: 2 (lower is better)
Translates to: WLPVGCLSVNFWESSSEAAGWIV*PPGMLR
Trigger: CCTTAACATGCCTGGGGGGCATACAATCCAACCCGC...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GTTTATTCTCCCTTTTGCATCTGTGGGATACCCAGAGTTAGAGAGAGGGGAAACAACAGCAACCAGAACTaGAACAGGGGAGCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: VYSPFCICGIPRVRERGNNSNQN*NRGAGG
Trigger: CCCACCAGCTCCCCTGTTCCAGTTCTGGTTGCTGTT...GTTTCCCCTCTCTCTAACTCTGGGTATCCCACAGATGCAAAAGGGAGAATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCCTCACAGCTGTGCTGATCGGTaGTTACCCAGCCATGGTGGT +
Preference number: 2 (lower is better)
Translates to: AQFSSLQSGIYYSCYWPHSCADR*LPSHGG
Trigger: ACCACCATGGCTGGGTAACCACCGATCAGCACAGCT...GTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATATCTAAGAAATGGCTGTaGCTCCTGAGGATGAGGGTG +
Preference number: 2 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMISKKWL*LLRMRV
Trigger: CACCCTCATCCTCAGGAGCCACAGCCATTTCTTAGA...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGCGAGTGAATGAAAACTaGAAAGGGCTGGACTCAAAG +
Preference number: 2 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKRVNEN*KGLDSK
Trigger: CTTTGAGTCCAGCCCTTTCCAGTTTTCATTCACTCG...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GGACTGGAGCAGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCTTCTTCTTCTCGTCCTaGTGCAGTTTCTTCAGACGG +
Preference number: 2 (lower is better)
Translates to: GLEQLSRRLSLLESIHFIFFFSS*CSFFRR
Trigger: CCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAA...GATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR CAA 90 bp ACTTTCATACCCACAGCTGAGGTGTCCTGCCCCAGTCACTTACACTaGGGTGAGTGGTCCTGTAGTTGTTTCTCTGAGGTTACATTTCGT +
Preference number: 2 (lower is better)
Translates to: TFIPTAEVSCPSHLH*GEWSCSCFSEVTFR
Trigger: ACGAAATGTAACCTCAGAGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTGTGGGTATGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR TCA 90 bp CGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACTATTCACTCCTCCTTAGTTTCTaGAGGTCTCTCCAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: RLKRLNGVQSSCSGEYYSLLLSF*RSLQGC
Trigger: ACAGCCTTGGAGAGACCTTCAGAAACTAAGGAGGAG...TGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp AATGGAGTAATTTTGCCCTCACTAAGCTTAAACCCCCTCCCTTCTCTACCTAAGTTTCATACCCACAGCTaGGGTGTCCTGCCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: NGVILPSLSLNPLPSLPKFHTHS*GVLPQS
Trigger: TGACTGGGGCAGGACACCTCAGCTGTGGGTATGAAA...CTTAGGTAGAGAAGGGAGGGGGTTTAAGCTTAGTGAGGGCAAAATTACTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR TCA 90 bp CGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACTATTCAATGCGTTGCCGATTTTaGGCACAGCTTGAGTGCAGT +
Preference number: 2 (lower is better)
Translates to: RLKRLNGVQSSCSGEYYSMRCRF*AQLECS
Trigger: ACTGCACTCAAGCTGTGCTCAAAATCGGCAACGCAT...TGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp TCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGATGCGTTGCCGATTTTaGGCACAGCTTGAGTGCAGT +
Preference number: 2 (lower is better)
Translates to: SSCSGEYYSVHSHGLLQRMRCRF*AQLECS
Trigger: ACTGCACTCAAGCTGTGCTCAAAATCGGCAACGCAT...CCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp GTGCTGATCGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGGAAACTAGAGGCAGGAGCAAGTTaGGGAACTCAAAAAGAAGAA +
Preference number: 2 (lower is better)
Translates to: VLIGGYPAMVVANTSGKLEAGAS*GTQKEE
Trigger: TTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTC...TAGTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp GAGTCAGGAGGCATGAAAATTAGTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCAAGAAACTGGCTTGTaGTTTGGCAGCATCACCTTC +
Preference number: 2 (lower is better)
Translates to: ESGGMKISLASASKQKWDQETGL*FGSITF
Trigger: GAAGGTGATGCTGCCAAAGCACAAGCCAGTTTCTTG...GTCCCACTTCTGTTTCGAGGCAGAAGCCAGACTAATTTTCATGCCTCCTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATACAAGAAACTGGCTTGTaGTTTGGCAGCATCACCTTC +
Preference number: 2 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMIQETGL*FGSITF
Trigger: GAAGGTGATGCTGCCAAAGCACAAGCCAGTTTCTTG...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp CTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCACTAACAGCTGAGGTGTCCTaGCCCAGTCACTTACACTTG +
Preference number: 2 (lower is better)
Translates to: LKTLTGLGRWNGVILPSLTAEVS*PSHLHL
Trigger: CAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTGT...TAGTGAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR CCA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGAACTGGCTTGTGCTTTaGCAGCATCACCTTCATACT +
Preference number: 2 (lower is better)
Translates to: QMQMRAPPVCNANNYRAANWLVL*QHHLHT
Trigger: AGTATGAAGGTGATGCTGCCAAAGCACAAGCCAGTT...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GAAGACTCATCAGAGCAAACCCCCAAACACTTGATTCTTTTGACAGCTCAGTTTGGCGGTGTGGGGAAGTaGTGGTTACCGGTTGGTTGT +
Preference number: 2 (lower is better)
Translates to: EDSSEQTPKHLILLTAQFGGVGK*WLPVGC
Trigger: ACAACCAACCGGTAACCACCACTTCCCCACACCGCC...AAACTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGCTTTGTGAAACTGATTaGGAGTCAGGAGGCATGAAA +
Preference number: 2 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKLCETD*ESGGMK
Trigger: TTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAG...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp AGATCATTGCCAGGTCAACTCCATCTCTCACACTGTCACTGGCCAAACACCAAAACCATGTCACACCTCTaGCAAAGATGTGGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: RSLPGQLHLSHCHWPNTKTMSHL*QRCGGR
Trigger: TCTTCCCCCACATCTTTGCCAGAGGTGTGACATGGT...TTTGGTGTTTGGCCAGTGACAGTGTGAGAGATGGAGTTGACCTGGCAATGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp TTGGAAAGAAAGTTAAGGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTCTGGAACAGGGGAGCTaGTGGGAAAGAGTAGCAGAT +
Preference number: 2 (lower is better)
Translates to: LERKLRAFSSLRPSLISSLEQGS*WERVAD
Trigger: ATCTGCTACTCTTTCCCACCAGCTCCCCTGTTCCAG...AGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCCTTAACTTTCTTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGCGAGTGAATGAAAACTaGAAAGGGCTGGACTCAAAG +
Preference number: 2 (lower is better)
Translates to: QMQMRAPPVCNANNYRAARVNEN*KGLDSK
Trigger: CTTTGAGTCCAGCCCTTTCCAGTTTTCATTCACTCG...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATATGCAGTTACTTCGAGTaGATGAAAACTGGAAAGGGC +
Preference number: 2 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMICSYFE*MKTGKG
Trigger: GCCCTTTCCAGTTTTCATTCACTCGAAGTAACTGCA...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp GGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATGCATGCTTGGTGTAAATAAATaGGTTGCCGATTTTGAGCAC +
Preference number: 2 (lower is better)
Translates to: GPFLLSGRVSSLLIGGCMLGVNK*VADFEH
Trigger: GTGCTCAAAATCGGCAACGCATTTATTTACACCAAG...CATGCATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp GCAAATATGAAGCCTTTCCCAAGGAGACCTGACAGGCCTAACTCAGCATCTCTCGAGAGGGGAAACGTCTaGTATTTTCTTCAGCAGTTG +
Preference number: 2 (lower is better)
Translates to: ANMKPFPRRPDRPNSASLERGNV*YFLQQL
Trigger: CAACTGCTGAAGAAAATAGCAGACGTTTCCCCTCTC...GAGAGATGCTGAGTTAGGCCTGTCAGGTCTCCTTGGGAAAGGCTTCATATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGATTTTCCCAAGAAACTaGCTTGTGCTTTGGCAGCAT +
Preference number: 2 (lower is better)
Translates to: QMQMRAPPVCNANNYRAAIFPRN*LVLWQH
Trigger: ATGCTGCCAAAGCACAAGCCAGTTTCTTGGGAAAAT...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CTCTCTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCCCAGTCACTTACACTTaGGTGAGTGGTCCTGTAGTT +
Preference number: 2 (lower is better)
Translates to: LSQNPNWSRKVEWSNFALPVTYT*VSGPVV
Trigger: AACTACAGGACCACTCACCCAAGTGTAAGTGACTGG...GAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR CCA 90 bp ATTCAGTACACAGCCATGGATTACTGCAAAGGAAGGGCAGAGAGACGGCATGTTGGTTTCTATAAACCTTaGCAGGAAGAGAGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: IQYTAMDYCKGRAERRHVGFYKP*QEERRG
Trigger: CCCTCTCCTCTCTTCCTGCCAAGGTTTATAGAAACC...AACATGCCGTCTCTCTGCCCTTCCTTTGCAGTAATCCATGGCTGTGTACTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GAAGACTCATCAGAGCAAACCCCCAAACACTTGATTCTTTTGACAGCTCAGTTTGAGCCACATGACTGTTaGCTTCTTGACCAGCGGCCA +
Preference number: 2 (lower is better)
Translates to: EDSSEQTPKHLILLTAQFEPHDC*LLDQRP
Trigger: TGGCCGCTGGTCAAGAAGCCAACAGTCATGTGGCTC...AAACTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GAAGACTCATCAGAGCAAACCCCCAAACACTTGATTCTTTTGACAGCTCAGTTTGGGAGGACTAGTGACTaGGATACAGGAGACCAAGGG +
Preference number: 2 (lower is better)
Translates to: EDSSEQTPKHLILLTAQFGRTSD*DTGDQG
Trigger: CCCTTGGTCTCCTGTATCCCAGTCACTAGTCCTCCC...AAACTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp TCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGAAACCCTCTAAGAAATaGCTGTGGCTCCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: SSCSGEYYSVHSHGLLQRKPSKK*LWLLRM
Trigger: CATCCTCAGGAGCCACAGCCATTTCTTAGAGGGTTT...CCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CAA 90 bp TCTCTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTaGCCCTCACTAAGCTTAAACCCCCTCCCTTCTCTACCTAAGTGT +
Preference number: 2 (lower is better)
Translates to: SLKTLTGLGRWNGVI*PSLSLNPLPSLPKC
Trigger: ACACTTAGGTAGAGAAGGGAGGGGGTTTAAGCTTAGTGAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR TCA 90 bp AGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCCTCACCTTATTGGGACAGTACACAAATGCAAATaGGGGCGCCTCCGGTTTGTA +
Preference number: 2 (lower is better)
Translates to: SLQSGIYYSCYWPHLIGTVHKCK*GRLRFV
Trigger: TACAAACCGGAGGCGCCCTCATTTGCATTTGTGTAC...TGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp AGATCATTGCCAGGTCAACTCCATCTCTCACACTGTCACTGGCCAAACACCAAACAAAGGCTGTCCTTTTaGAACCCTCTAAGAAATGGC +
Preference number: 2 (lower is better)
Translates to: RSLPGQLHLSHCHWPNTKQRLSF*NPLRNG
Trigger: GCCATTTCTTAGAGGGTTTCAAAAGGACAGCCTTTG...TTTGGTGTTTGGCCAGTGACAGTGTGAGAGATGGAGTTGACCTGGCAATGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp AGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACAGGACCCTGGGCCGTCTTTCTTTGCTTaGAAGCATTCACTTCATCAT +
Preference number: 2 (lower is better)
Translates to: SCSGEYYSVHSHGLQDPGPSFFA*KHSLHH
Trigger: ATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGG...CCCAGGGTCCTGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR-3UTR CCA 90 bp TGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGGTGTGGGGAAGTGGTaGTTACCGGTTGGTTGTTTA +
Preference number: 2 (lower is better)
Translates to: CTQMQMRAPPVCNANNYRGVGKW*LPVGCL
Trigger: TAAACAACCAACCGGTAACCACCACTTCCCCACACC...CCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GATGCTGAAATACCTCACAAGAAGAATTCGGTAAGGCTATCATTCAAGACTCTAGGCGGTGTGGGGAAGTaGTGGTTACCGGTTGGTTGT +
Preference number: 2 (lower is better)
Translates to: DAEIPHKKNSVRLSFKTLGGVGK*WLPVGC
Trigger: ACAACCAACCGGTAACCACCACTTCCCCACACCGCC...TAGAGTCTTGAATGATAGCCTTACCGAATTCTTCTTGTGAGGTATTTCAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp TTGACAGCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCTGGAACAGGGGAGCTaGTGGGAAAGAGTAGCAGAT +
Preference number: 2 (lower is better)
Translates to: LTAQFSSLQSGIYYSCYWLEQGS*WERVAD
Trigger: ATCTGCTACTCTTTCCCACCAGCTCCCCTGTTCCAG...CCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CATTCACCAAATGAACTAGAAGACTCATCAGAGCAAACCCCCAAACACTTGATTAGCTGTGCTGATCGGTaGTTACCCAGCCATGGTGGT +
Preference number: 2 (lower is better)
Translates to: HSPNELEDSSEQTPKHLISCADR*LPSHGG
Trigger: ACCACCATGGCTGGGTAACCACCGATCAGCACAGCT...AATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTCTAGTTCATTTGGTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CATTCACCAAATGAACTAGAAGACTCATCAGAGCAAACCCCCAAACACTTGATTGGGAGGACTAGTGACTaGGATACAGGAGACCAAGGG +
Preference number: 2 (lower is better)
Translates to: HSPNELEDSSEQTPKHLIGRTSD*DTGDQG
Trigger: CCCTTGGTCTCCTGTATCCCAGTCACTAGTCCTCCC...AATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTCTAGTTCATTTGGTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp TTGACAGCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGGTACACAAATGCAAATaGGGGCGCCTCCGGTTTGTA +
Preference number: 2 (lower is better)
Translates to: LTAQFSSLQSGIYYSCYWVHKCK*GRLRFV
Trigger: TACAAACCGGAGGCGCCCTCATTTGCATTTGTGTAC...CCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp AGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGAAGATTTTGAGCACAGCTTaGGTGCAGTTACTTCGAGTG +
Preference number: 2 (lower is better)
Translates to: SCSGEYYSVHSHGLLQRKILSTA*VQLLRV
Trigger: CACTCGAAGTAACTGCACTCAAGCTGTGCTCAAAAT...CTTCCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp GCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCCTCACATTTTGAGCACAGCTTaGGTGCAGTTACTTCGAGTG +
Preference number: 2 (lower is better)
Translates to: AQFSSLQSGIYYSCYWPHILSTA*VQLLRV
Trigger: CACTCGAAGTAACTGCACTCAAGCTGTGCTCAAAAT...GTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp GGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATGCATGTGTCAACAAGAAAAGTaGGTGCATATGTTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: GPFLLSGRVSSLLIGGCMCQQEK*VHMFAF
Trigger: AAAAGCAAACATATGCACGCACTTTTCTTGTTGACA...CATGCATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTGGACCCTGGGTCTCATaGAGCATGCAGCAAACAGCA +
Preference number: 2 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLGPWVS*SMQQTA
Trigger: TGCTGTTTGCTGCATGCTGCATGAGACCCAGGGTCC...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394610.7
3UTR-3UTR CCA 90 bp TTGACAGCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGGTGGTTACCCAGCCATaGTGGTTGCAAATACCTCAG +
Preference number: 2 (lower is better)
Translates to: LTAQFSSLQSGIYYSCYWVVTQP*WLQIPQ
Trigger: CTGAGGTATTTGCAACCACCATGGCTGGGTAACCAC...CCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACTATTCAAAAACTGGAAAGGGCTaGACTCAAAGGTTAGAAGGA +
Preference number: 2 (lower is better)
Translates to: RLKRLNGVQSSCSGEYYSKTGKG*TQRLEG
Trigger: TCCTTCTAACCTTTGAGTCCAGCCCTTTCCAGTTTT...TGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GTTAAGGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATAGCAGTTGTGTTTTATaGGAAGGGCTTGGTGTAAAT +
Preference number: 2 (lower is better)
Translates to: VKGLFFSPAESHLFLLGDSSCVL*EGLGVN
Trigger: ATTTACACCAAGCCCTTCCCATAAAACACAACTGCT...ATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCCTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp AGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGAAGCTTATTGGGACAGTATaGAGCCCTTCCGGAAATTAC +
Preference number: 2 (lower is better)
Translates to: SCSGEYYSVHSHGLLQRKLIGTV*SPSGNY
Trigger: GTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAG...CTTCCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAAGGGAGTCAGGAGGCATaGAAATTAGTCTGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKGSQEA*KLVWLL
Trigger: CAGAAGCCAGACTAATTTTCATGCCTCCTGACTCCC...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATAATGACATTCACCAAATaGACTAGAAGACTCATCAGA +
Preference number: 2 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMIMTFTK*TRRLIR
Trigger: TCTGATGAGTCTTCTAGTTCATTTGGTGAATGTCAT...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGTGTCAACAAGAAAAGTaGGTGCATATGTTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: QMQMRAPPVCNANNYRAACQQEK*VHMFAF
Trigger: AAAAGCAAACATATGCACGCACTTTTCTTGTTGACA...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp TCAGAAATGTTTAACAGTGGCTGTAGACAGTCAACCCATCGAACCAGAGAAATGTGGTGTATGTGTGTGTaGTTGCAGTTTGAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: SEMFNSGCRQSTHRTREMWCMCV*LQFEGR
Trigger: TCTCCCCTCAAACTGCAAGCACACACACATACACCA...CATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR CCA 90 bp ATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACGGTGTGGGGAAGTGGTaGTTACCGGTTGGTTGTTTA +
Preference number: 2 (lower is better)
Translates to: ICTQMQMRAPPVCNANNYGVGKW*LPVGCL
Trigger: TAAACAACCAACCGGTAACCACCACTTCCCCACACC...GTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAAGTGGTTACCCAGCCATaGTGGTTGCAAATACCTCAG +
Preference number: 2 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKVVTQP*WLQIPQ
Trigger: CTGAGGTATTTGCAACCACCATGGCTGGGTAACCAC...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp AGATCATTGCCAGGTCAACTCCATCTCTCACACTGTCACTGGCCAAACACCAAAAGCAGTTGTGTTTTATaGGAAGGGCTTGGTGTAAAT +
Preference number: 2 (lower is better)
Translates to: RSLPGQLHLSHCHWPNTKSSCVL*EGLGVN
Trigger: ATTTACACCAAGCCCTTCCCATAAAACACAACTGCT...TTTGGTGTTTGGCCAGTGACAGTGTGAGAGATGGAGTTGACCTGGCAATGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CCTTCTCAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTCTGGCCTCACCTTATTaGGACAGTATGGAGCCCTTC +
Preference number: 2 (lower is better)
Translates to: PSQYFKKAWKFGITLFDCLASPY*DSMEPF
Trigger: GAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAG...ACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTGAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATATTCCAGCCTACAAAGTaGGATTTATTATTCCTGCTA +
Preference number: 2 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMIFQPTK*DLLFLL
Trigger: TAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAA...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CAA 90 bp ATACTCCACTGTAACTTGAATTTTCCCAAGAAACTGGCTTGTGCTTaGGCAGCATCACCTTCATACTTGCTCTGGTCACTCACCAATCAA +
Preference number: 2 (lower is better)
Translates to: ILHCNLNFPKKLACA*AASPSYLLWSLTNQ
Trigger: TTGATTGGTGAGTGACCAGAGCAAGTATGAAGGTGATGCTGCCAAAGCACAAGCCAGTTTCTTGGGAAAATTCAAGTTACAGTGGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp AGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGAAGTGGCATAACCTTGTTTaGCTGTGTGCTTTGAAAGTA +
Preference number: 2 (lower is better)
Translates to: SCSGEYYSVHSHGLLQRKWHNLV*LCALKV
Trigger: TACTTTCAAAGCACACAGTCAAACAAGGTTATGCCA...CTTCCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp AGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCCTCACCTTATTGGGACAGTTTATTCTCCCTTTTaGATCTGTGGGATACCCAGA +
Preference number: 2 (lower is better)
Translates to: SLQSGIYYSCYWPHLIGTVYSPF*ICGIPR
Trigger: TCTGGGTATCCCACAGATGCAAAAGGGAGAATAAAC...TGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp TGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGTGGTGGTTACCGGTTaGTTGTTTAAGCGTGAATTT +
Preference number: 2 (lower is better)
Translates to: CTQMQMRAPPVCNANNYRVVVTG*LFKREF
Trigger: AAATTCACGCTTAAACAACCAACCGGTAACCACCAC...CCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp AACATCAAAAGACCTCGTATCCAGGAATGTAACGTATATAAACAGATTGAATCCGAGCCACATGACTGTTaGCTTCTTGACCAGCGGCCA +
Preference number: 2 (lower is better)
Translates to: NIKRPRIQECNVYKQIESEPHDC*LLDQRP
Trigger: TGGCCGCTGGTCAAGAAGCCAACAGTCATGTGGCTC...GGATTCAATCTGTTTATATACGTTACATTCCTGGATACGAGGTCTTTTGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATACCATGTCACACCTCTaGCAAAGATGTGGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: LICTQMQMRAPPVCNANNTMSHL*QRCGGR
Trigger: TCTTCCCCCACATCTTTGCCAGAGGTGTGACATGGT...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATGTTACCCAGCCATGGTaGTTGCAAATACCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: LICTQMQMRAPPVCNANNVTQPW*LQIPQG
Trigger: TCCCTGAGGTATTTGCAACCACCATGGCTGGGTAAC...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp ATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACAAACCCTCTAAGAAATaGCTGTGGCTCCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: ICTQMQMRAPPVCNANNYKPSKK*LWLLRM
Trigger: CATCCTCAGGAGCCACAGCCATTTCTTAGAGGGTTT...GTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp CTTTCTCTTGCATATTCAGAAATGTTTAACAGTGGCTGTAGACAGTCAACCCATTGTGTGCTTGCAGTTTaGGGGGAGAGGAAATTGGTT +
Preference number: 2 (lower is better)
Translates to: LSLAYSEMFNSGCRQSTHCVLAV*GERKLV
Trigger: AACCAATTTCCTCTCCCCTCAAACTGCAAGCACACA...ATGGGTTGACTGTCTACAGCCACTGTTAAACATTTCTGAATATGCAAGAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR TCA 90 bp ATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACTGCAGTTACTTCGAGTaGATGAAAACTGGAAAGGGC +
Preference number: 2 (lower is better)
Translates to: ICTQMQMRAPPVCNANNYCSYFE*MKTGKG
Trigger: GCCCTTTCCAGTTTTCATTCACTCGAAGTAACTGCA...GTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp AATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGATGCAGGATGCATCTaGGAGCCACATGACTGTTGG +
Preference number: 2 (lower is better)
Translates to: NVTYINRLNPFVKLIGSQDAGCI*EPHDCW
Trigger: CCAACAGTCATGTGGCTCGCAGATGCATCCTGCATC...CTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp TGCTCTGGTCACTCACCAATCAATAGAGCACCAAACCTACACAGCAAACCTATAGGGATTTATTATTCCTaGTACTGGCCTCACCTTATT +
Preference number: 2 (lower is better)
Translates to: CSGHSPINRAPNLHSKPIGIYYS*YWPHLI
Trigger: AATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCC...TATAGGTTTGCTGTGTAGGTTTGGTGCTCTATTGATTGGTGAGTGACCAGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp TCAGAAATGTTTAACAGTGGCTGTAGACAGTCAACCCATCGAACCAGAGAAATGTTACACTTGGGTGAGTaGTCCTGTAGTTGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: SEMFNSGCRQSTHRTREMLHLGE*SCSCFS
Trigger: AGAGAAACAACTACAGGACCACTCACCCAAGTGTAA...CATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR CAA 90 bp GAACTAGAAGACTCATCAGAGCAAACCCCCAAACACTTGATTCTTTaGACAGCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCC +
Preference number: 2 (lower is better)
Translates to: ELEDSSEQTPKHLIL*TAQFSSLQSGIYYS
Trigger: GGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTCTAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp TTGACAGCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGTACTCCACTGTAACTTaGATTTTCCCAAGAAACTGG +
Preference number: 2 (lower is better)
Translates to: LTAQFSSLQSGIYYSCYWYSTVT*IFPRNW
Trigger: CCAGTTTCTTGGGAAAATTCAAGTTACAGTGGAGTA...CCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp AATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGCTCCTCCTTAGTTTCTaGAGGTCTCTCCAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: NVTYINRLNPFVKLIGSQLLLSF*RSLQGC
Trigger: ACAGCCTTGGAGAGACCTTCAGAAACTAAGGAGGAG...CTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp GATGCTGAAATACCTCACAAGAAGAATTCGGTAAGGCTATCATTCAAGACTCTACATCACCTTCATACTTaGTCTGGTCACTCACCAATC +
Preference number: 2 (lower is better)
Translates to: DAEIPHKKNSVRLSFKTLHHLHT*SGHSPI
Trigger: GATTGGTGAGTGACCAGAGCAAGTATGAAGGTGATG...TAGAGTCTTGAATGATAGCCTTACCGAATTCTTCTTGTGAGGTATTTCAGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp AAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGAAAATTTTAGCCACAGATCATTaGCAGGTCAACTCCATCTCT +
Preference number: 2 (lower is better)
Translates to: KQIESLCETDWESGGMKILATDH*QVNSIS
Trigger: AGAGATGGAGTTGACCTGGCAATGATCTGTGGCTAA...AATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp ATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACATTTTCCCAAGAAACTaGCTTGTGCTTTGGCAGCAT +
Preference number: 2 (lower is better)
Translates to: ICTQMQMRAPPVCNANNYIFPRN*LVLWQH
Trigger: ATGCTGCCAAAGCACAAGCCAGTTTCTTGGGAAAAT...GTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAAATTTTCCCAAGAAACTaGCTTGTGCTTTGGCAGCAT +
Preference number: 2 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKIFPRN*LVLWQH
Trigger: ATGCTGCCAAAGCACAAGCCAGTTTCTTGGGAAAAT...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTCTTATTGGGACAGTATaGAGCCCTTCCGGAAATTAC +
Preference number: 2 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLLIGTV*SPSGNY
Trigger: GTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAG...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp TGCTCTGGTCACTCACCAATCAATAGAGCACCAAACCTACACAGCAAACCTATATTCCAGCCTACAAAGTaGGATTTATTATTCCTGCTA +
Preference number: 2 (lower is better)
Translates to: CSGHSPINRAPNLHSKPIFQPTK*DLLFLL
Trigger: TAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAA...TATAGGTTTGCTGTGTAGGTTTGGTGCTCTATTGATTGGTGAGTGACCAGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAACTCATCTCTTCTTATTaGGGGATGCATGCAAAATGC +
Preference number: 2 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKLISSY*GMHAKC
Trigger: GCATTTTGCATGCATCCCCCAATAAGAAGAGATGAG...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CCTTCTCAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGGTGGTTACCGGTTaGTTGTTTAAGCGTGAATTT +
Preference number: 2 (lower is better)
Translates to: PSQYFKKAWKFGITLFDCVVVTG*LFKREF
Trigger: AAATTCACGCTTAAACAACCAACCGGTAACCACCAC...ACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTGAGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTCTTTGTGAAACTGATTaGGAGTCAGGAGGCATGAAA +
Preference number: 2 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLLCETD*ESGGMK
Trigger: TTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAG...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp AAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGAAAATTCTCATCTCTTCTTATTaGGGGATGCATGCAAAATGC +
Preference number: 2 (lower is better)
Translates to: KQIESLCETDWESGGMKILISSY*GMHAKC
Trigger: GCATTTTGCATGCATCCCCCAATAAGAAGAGATGAG...AATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp AAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGAAAATTTGGCATAACCTTGTTTaGCTGTGTGCTTTGAAAGTA +
Preference number: 2 (lower is better)
Translates to: KQIESLCETDWESGGMKIWHNLV*LCALKV
Trigger: TACTTTCAAAGCACACAGTCAAACAAGGTTATGCCA...AATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp CCTTCTCAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTTACTCCACTGTAACTTaGATTTTCCCAAGAAACTGG +
Preference number: 2 (lower is better)
Translates to: PSQYFKKAWKFGITLFDCYSTVT*IFPRNW
Trigger: CCAGTTTCTTGGGAAAATTCAAGTTACAGTGGAGTA...ACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTGAGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR TCA 90 bp CCTTCTCAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTATGACATTCACCAAATaGACTAGAAGACTCATCAGA +
Preference number: 2 (lower is better)
Translates to: PSQYFKKAWKFGITLFDCMTFTK*TRRLIR
Trigger: TCTGATGAGTCTTCTAGTTCATTTGGTGAATGTCAT...ACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTGAGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CCA 90 bp AATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGTTAAGCGTGAATTTCTaGGAAAGCAGCTCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: NVTYINRLNPFVKLIGSQLSVNF*ESSSEA
Trigger: AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA...CTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR GCA 90 bp AATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGCTTGGTGTAAATAAATaGGTTGCCGATTTTGAGCAC +
Preference number: 2 (lower is better)
Translates to: NVTYINRLNPFVKLIGSQLGVNK*VADFEH
Trigger: GTGCTCAAAATCGGCAACGCATTTATTTACACCAAG...CTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CCA 72 bp GCCTTGCAGCATCACTGGGTCATTGGGTTAAGGAGCTaGCCCGGCATGCCTTCGTTTTGCCAGCCCTCACCC +
Preference number: 3 (lower is better)
Translates to: ALQHHWVIGLRS*PGMPSFCQPSP
Trigger: GGGTGAGGGCTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATGCTGCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CCA 72 bp AGTCTCCTGGACCCCGTTCCAGCCTTGCAGCATCACTaGGTCATTGGGTTAAGGAGCTGGCCCGGCATGCCT +
Preference number: 3 (lower is better)
Translates to: SLLDPVPALQHH*VIGLRSWPGMP
Trigger: AGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATGCTGCAAGGCTGGAACGGGGTCCAGGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CCA 72 bp GGACCCCGTTCCAGCCTTGCAGCATCACTGGGTCATTaGGTTAAGGAGCTGGCCCGGCATGCCTTCGTTTTG +
Preference number: 3 (lower is better)
Translates to: GPRSSLAASLGH*VKELARHAFVL
Trigger: CAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATGCTGCAAGGCTGGAACGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp GGACCAGGGAGGACTAGTGACTGGGATACAGGAGACCAAGGGGACAGCTGTGCTATGACTGTTGGCTTCTaGACCAGCGGCCAGACATCA +
Preference number: 3 (lower is better)
Translates to: GPGRTSDWDTGDQGDSCAMTVGF*TSGQTS
Trigger: TGATGTCTGGCCGCTGGTCAAGAAGCCAACAGTCAT...AGCACAGCTGTCCCCTTGGTCTCCTGTATCCCAGTCACTAGTCCTCCCTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CCA 72 bp ACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTaGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTC +
Preference number: 3 (lower is better)
Translates to: TGRRCGEVVVTG*LFKREFLGKQL
Trigger: GAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR CCA 72 bp TGGGATGCAGGATGCATCTGCGAGCCACATGACTGTTaGCTTCTTGACCAGCGGCCAGACATCACCCTCAGA +
Preference number: 3 (lower is better)
Translates to: WDAGCICEPHDC*LLDQRPDITLR
Trigger: TCTGAGGGTGATGTCTGGCCGCTGGTCAAGAAGCCAACAGTCATGTGGCTCGCAGATGCATCCTGCATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp CATCACTGGGTCATTGGGTTAAGGAGCTGGCCCGGCATGCCTTCGTTTTGCCAGACTGGCCTCACCTTATaGGGACAGTATGGAGCCCTT +
Preference number: 3 (lower is better)
Translates to: HHWVIGLRSWPGMPSFCQTGLTL*GQYGAL
Trigger: AAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGT...CTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR GCA 72 bp GGCAGGAAGAGAGGAGAGGGCGCGGGTTGGATTGTATaGCCCCCAGGCATGTTAAGGGGGAAATTAGAGAAA +
Preference number: 3 (lower is better)
Translates to: GRKRGEGAGWIV*PPGMLRGKLEK
Trigger: TTTCTCTAATTTCCCCCTTAACATGCCTGGGGGGCATACAATCCAACCCGCGCCCTCTCCTCTCTTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CCA 72 bp GATACAGGAGACCAAGGGGACAGCTGTGCTGATCGGTaGTTACCCAGCCATGGTGGTTGCAAATACCTCAGG +
Preference number: 3 (lower is better)
Translates to: DTGDQGDSCADR*LPSHGGCKYLR
Trigger: CCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCACAGCTGTCCCCTTGGTCTCCTGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp GGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGCCAAACCCCCAAACACTaGATTCTTTTGACAGCTCAG +
Preference number: 3 (lower is better)
Translates to: GHLGHLLHTVSWTPFQPCQTPKH*ILLTAQ
Trigger: CTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTG...GCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp GCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCTGGAAACTGGCTTGTGCTTaGGCAGCATCACCTTCATAC +
Preference number: 3 (lower is better)
Translates to: ASASKQKWDLGQVPSLLWKLACA*AASPSY
Trigger: GTATGAAGGTGATGCTGCCAAAGCACAAGCCAGTTT...CCAGAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp CAGCTGAGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTTGTATGTGTGTGTGCTaGCAGTTTGAGGGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: QLRCPAPVTYTWVSGPVVCMCVC*QFEGRG
Trigger: TCCTCTCCCCTCAAACTGCAAGCACACACACATACA...AACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR CAA 90 bp AGATCATTGCCAGGTCAACTCCATCTCTCACACTGTCACTGGCCAAACACCAAAGGAGGCCCAGCTCTGTaGCGCAGGAAAAGGGTGTCT +
Preference number: 3 (lower is better)
Translates to: RSLPGQLHLSHCHWPNTKGGPAL*RRKRVS
Trigger: AGACACCCTTTTCCTGCGCAACAGAGCTGGGCCTCC...TTTGGTGTTTGGCCAGTGACAGTGTGAGAGATGGAGTTGACCTGGCAATGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394610.7
3UTR GCA 72 bp CAGAACAGTACTTTCATACCCACAGCTGAGGTGTCCTaGCCCAGTCACTTACACTTGGGTGAGTGGTCCTGT +
Preference number: 3 (lower is better)
Translates to: QNSTFIPTAEVS*PSHLHLGEWSC
Trigger: ACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTGTGGGTATGAAAGTACTGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR GCA 72 bp CCCTGGGACTGGAGCAGCTCAGCCGCCGTCTTTCTTTaGTTGAAAGCATTCACTTCATCATCCAGGGATTTC +
Preference number: 3 (lower is better)
Translates to: PWDWSSSAAVFL*LKAFTSSSRDF
Trigger: GAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR CCA 72 bp CCACAGCTGAGGTGTCCTGCCCCAGTCACTTACACTTaGGTGAGTGGTCCTGTAGTTGTTTCTCTGAGGTTA +
Preference number: 3 (lower is better)
Translates to: PQLRCPAPVTYT*VSGPVVVSLRL
Trigger: TAACCTCAGAGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR CAA 90 bp CTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCGTGGTTACCGGTTGGTaGTTTAAGCGTGAATTTCTG +
Preference number: 3 (lower is better)
Translates to: LASASKQKWDLGQVPSLLVVTGW*FKREFL
Trigger: CAGAAATTCACGCTTAAACAACCAACCGGTAACCAC...GAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp GGGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGTCTCAACTCCTTAAATaGGAAAGAAAGTTAAGGGCC +
Preference number: 3 (lower is better)
Translates to: GSPRAPVTHSLLDPVPALSQLLK*ERKLRA
Trigger: GGCCCTTAACTTTCTTTCCAATTTAAGGAGTTGAGA...CAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp AGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTGTTTCTGTGTGTGCTTGCAGTTaGAGGGGAGAGGAAATTGGT +
Preference number: 3 (lower is better)
Translates to: RCPAPVTYTWVSGPVVVSVCACS*RGEEIG
Trigger: ACCAATTTCCTCTCCCCTCAAACTGCAAGCACACAC...AGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR CAA 90 bp GCAAATATGAAGCCTTTCCCAAGGAGACCTGACAGGCCTAACTCAGCATCTCTCACCCAGCCATGGTGGTaGCAAATACCTCAGGGAAAC +
Preference number: 3 (lower is better)
Translates to: ANMKPFPRRPDRPNSASLTQPWW*QIPQGN
Trigger: GTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGT...GAGAGATGCTGAGTTAGGCCTGTCAGGTCTCCTTGGGAAAGGCTTCATATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp GTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCTCATCTCTTCTTATaGGGGGATGCATGCAAAATG +
Preference number: 3 (lower is better)
Translates to: VWLLPRNRSGTSVKSLPFSHLFL*GDACKM
Trigger: CATTTTGCATGCATCCCCCAATAAGAAGAGATGAGA...GAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGGTTAGCCACAGATCATaGCCAGGTCAACTCCATCTC +
Preference number: 3 (lower is better)
Translates to: QMQMRAPPVCNANNYRAAVSHRS*PGQLHL
Trigger: GAGATGGAGTTGACCTGGCAATGATCTGTGGCTAAC...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR GCA 72 bp GCGGGGAATACTATTCAGTACACAGCCATGGATTACTaGAAAGGAAGGGCAGAGAGACGGCATGTTAGCCAC +
Preference number: 3 (lower is better)
Translates to: AGNTIQYTAMDY*KGRAERRHVSH
Trigger: GTGGCTAACATGCCGTCTCTCTGCCCTTCCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR GCA 72 bp ATTGGGTTAAGGAGCTGGCCCGGCATGCCTTCGTTTTaGCAGCCCTCACCCAATCCATCTTCAGATGTTTTT +
Preference number: 3 (lower is better)
Translates to: IGLRSWPGMPSF*QPSPNPSSDVF
Trigger: AAAAACATCTGAAGATGGATTGGGTGAGGGCTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp CTCTCTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCCCCAGTCACTTACACTaGGGTGAGTGGTCCTGTAGT +
Preference number: 3 (lower is better)
Translates to: LSQNPNWSRKVEWSNFALPSHLH*GEWSCS
Trigger: ACTACAGGACCACTCACCCAAGTGTAAGTGACTGGG...GAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR CAA 90 bp AGATCATTGCCAGGTCAACTCCATCTCTCACACTGTCACTGGCCAAACACCAAAACTGGCCTCACCTTATaGGGACAGTATGGAGCCCTT +
Preference number: 3 (lower is better)
Translates to: RSLPGQLHLSHCHWPNTKTGLTL*GQYGAL
Trigger: AAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGT...TTTGGTGTTTGGCCAGTGACAGTGTGAGAGATGGAGTTGACCTGGCAATGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR TCA 72 bp GGGACTGGAGCAGCTCAGCCGCCGTCTTTCTTTGCTTaGAAGCATTCACTTCATCATCCAGGGATTTCTTCT +
Preference number: 3 (lower is better)
Translates to: GTGAAQPPSFFA*KHSLHHPGISS
Trigger: AGAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR CCA 72 bp GAGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTaGTCCTGTAGTTGTTTCTCTGAGGTTACATTTCGT +
Preference number: 3 (lower is better)
Translates to: EVSCPSHLHLGE*SCSCFSEVTFR
Trigger: ACGAAATGTAACCTCAGAGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR CCA 72 bp CCCAGGTTGAGCAGAAACCTCTCTCAAAACCCTAACTaGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTC +
Preference number: 3 (lower is better)
Translates to: PRLSRNLSQNPN*SRKVEWSNFAL
Trigger: GAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAGGTTTCTGCTCAACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR CAA 90 bp CATCACTGGGTCATTGGGTTAAGGAGCTGGCCCGGCATGCCTTCGTTTTGCCAGACCTATATTCTTGCTTaGTCAACAAGAAAAGTGCGT +
Preference number: 3 (lower is better)
Translates to: HHWVIGLRSWPGMPSFCQTYILA*STRKVR
Trigger: ACGCACTTTTCTTGTTGACAAAGCAAGAATATAGGT...CTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp TGGTGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAATCCCAAGAAACTGGCTaGTGCTTTGGCAGCATCACC +
Preference number: 3 (lower is better)
Translates to: WWLPVGCLSVNFWESSSESQETG*CFGSIT
Trigger: GGTGATGCTGCCAAAGCACAAGCCAGTTTCTTGGGA...TTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp GCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCTGGGTGGGTCTAATACTTTaGAATTATTCAGAGCTTCTC +
Preference number: 3 (lower is better)
Translates to: ASASKQKWDLGQVPSLLWVGLIL*NYSELL
Trigger: GAGAAGCTCTGAATAATTCAAAAGTATTAGACCCAC...CCAGAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp AATGGAGTAATTTTGCCCTCACTAAGCTTAAACCCCCTCCCTTCTCTACCTAAGCAGGAAGAGAGCTTCTaGCCTGGACACAGGGACACA +
Preference number: 3 (lower is better)
Translates to: NGVILPSLSLNPLPSLPKQEESF*PGHRDT
Trigger: TGTGTCCCTGTGTCCAGGCAAGAAGCTCTCTTCCTG...CTTAGGTAGAGAAGGGAGGGGGTTTAAGCTTAGTGAGGGCAAAATTACTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR CAA 90 bp CAGAGAGACGGCATGTTAGCCACAGATCATTGCCAGGTCAACTCCATCTCTCACCCAAAGGCTGTCCTTTaGAAACCCTCTAAGAAATGG +
Preference number: 3 (lower is better)
Translates to: QRDGMLATDHCQVNSISHPKAVL*KPSKKW
Trigger: CCATTTCTTAGAGGGTTTCAAAAGGACAGCCTTTGG...GTGAGAGATGGAGTTGACCTGGCAATGATCTGTGGCTAACATGCCGTCTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp GTCCAGTCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACAGAGCCGCCGTCTTTCTTaGCTTGAAAGCATTCACTTC +
Preference number: 3 (lower is better)
Translates to: VQSSCSGEYYSVHSHGLQSRRLS*LESIHF
Trigger: GAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCT...CTGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGACTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR TCA 72 bp CTTCTTGCCTGGACACAGGGACACATGAACACTTGTTaGGTGGTGTGGTGTATGTGTGTGTGCTTGCAGTTT +
Preference number: 3 (lower is better)
Translates to: LLAWTQGHMNTC*VVWCMCVCLQF
Trigger: AAACTGCAAGCACACACACATACACCACACCACTCAACAAGTGTTCATGTGTCCCTGTGTCCAGGCAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR CAA 90 bp AGATCATTGCCAGGTCAACTCCATCTCTCACACTGTCACTGGCCAAACACCAAAAAACTGGCTTGTGCTTaGGCAGCATCACCTTCATAC +
Preference number: 3 (lower is better)
Translates to: RSLPGQLHLSHCHWPNTKKLACA*AASPSY
Trigger: GTATGAAGGTGATGCTGCCAAAGCACAAGCCAGTTT...TTTGGTGTTTGGCCAGTGACAGTGTGAGAGATGGAGTTGACCTGGCAATGATCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp GTTAAGGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATGATTTTGAGCACAGCTaGAGTGCAGTTACTTCGAGT +
Preference number: 3 (lower is better)
Translates to: VKGLFFSPAESHLFLLGDDFEHS*SAVTSS
Trigger: ACTCGAAGTAACTGCACTCAAGCTGTGCTCAAAATC...ATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCCTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp GACAAGGGAGGGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGAAACACTTGATTCTTTaGACAGCTCAGTTTTCCAGC +
Preference number: 3 (lower is better)
Translates to: DKGGLSTSQRFPKPLSDGKHLIL*TAQFSS
Trigger: GCTGGAAAACTGAGCTGTCAAAAGAATCAAGTGTTT...CCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCCCTCCCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp GGGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATGTGGGTCTAATACTTTaGAATTATTCAGAGCTTCTC +
Preference number: 3 (lower is better)
Translates to: GLSTSQRFPKPLSDGTHDVGLIL*NYSELL
Trigger: GAGAAGCTCTGAATAATTCAAAAGTATTAGACCCAC...ATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp CTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCACTAACACATGAACACTTGTaGAGTGGTGTGGTGTATGTG +
Preference number: 3 (lower is better)
Translates to: LKTLTGLGRWNGVILPSLTHEHL*SGVVYV
Trigger: CACATACACCACACCACTCAACAAGTGTTCATGTGT...TAGTGAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR GCA 72 bp CAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTaGTACTGGCCTCACCTTATTGGGACAGTATGGAGC +
Preference number: 3 (lower is better)
Translates to: QFSSLQSGIYYS*YWPHLIGTVWS
Trigger: GCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR GCA 72 bp AGTACACAGCCATGGATTACAGGACCCTGGGTCTCATaGAGCATGCAGCAAACAGCAGAGTTAATTTTTCTT +
Preference number: 3 (lower is better)
Translates to: STQPWITGPWVS*SMQQTAELIFL
Trigger: AAGAAAAATTAACTCTGCTGTTTGCTGCATGCTGCATGAGACCCAGGGTCCTGTAATCCATGGCTGTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR CCA 72 bp TGGTGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTaGGAAAGCAGCTCTGAAGCTGGACATAGAATCATC +
Preference number: 3 (lower is better)
Translates to: WWLPVGCLSVNF*ESSSEAGHRII
Trigger: GATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp CCTTCTCAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTTCCCAAGAAACTGGCTaGTGCTTTGGCAGCATCACC +
Preference number: 3 (lower is better)
Translates to: PSQYFKKAWKFGITLFDCSQETG*CFGSIT
Trigger: GGTGATGCTGCCAAAGCACAAGCCAGTTTCTTGGGA...ACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTGAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp GATGCTGAAATACCTCACAAGAAGAATTCGGTAAGGCTATCATTCAAGACTCTATCCCAAGAAACTGGCTaGTGCTTTGGCAGCATCACC +
Preference number: 3 (lower is better)
Translates to: DAEIPHKKNSVRLSFKTLSQETG*CFGSIT
Trigger: GGTGATGCTGCCAAAGCACAAGCCAGTTTCTTGGGA...TAGAGTCTTGAATGATAGCCTTACCGAATTCTTCTTGTGAGGTATTTCAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp AGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCCTCACCTTATTGGGACAGTGGTTACCGGTTGGTaGTTTAAGCGTGAATTTCTG +
Preference number: 3 (lower is better)
Translates to: SLQSGIYYSCYWPHLIGTVVTGW*FKREFL
Trigger: CAGAAATTCACGCTTAAACAACCAACCGGTAACCAC...TGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp CTCTCTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCATACATTTTCCCCCTTaGCTGGAATCTATAGAAGGT +
Preference number: 3 (lower is better)
Translates to: LSQNPNWSRKVEWSNFALIHFPP*LESIEG
Trigger: ACCTTCTATAGATTCCAGCAAAGGGGGAAAATGTAT...GAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR CCA 72 bp GAAACCTCTCTCAAAACCCTAACTGGTCTCGGAAGGTaGAATGGAGTAATTTTGCCCTCACTAAGCTTAAAC +
Preference number: 3 (lower is better)
Translates to: ETSLKTLTGLGR*NGVILPSLSLN
Trigger: GTTTAAGCTTAGTGAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR GCA 72 bp AGTTGTGTTTTATGGGAAGGGCTTGGTGTAAATAAATaGGTTGCCGATTTTGAGCACAGCTTGAGTGCAGTT +
Preference number: 3 (lower is better)
Translates to: SCVLWEGLGVNK*VADFEHSLSAV
Trigger: AACTGCACTCAAGCTGTGCTCAAAATCGGCAACGCATTTATTTACACCAAGCCCTTCCCATAAAACACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTAAACTGGCTTGTGCTTaGGCAGCATCACCTTCATAC +
Preference number: 3 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLKLACA*AASPSY
Trigger: GTATGAAGGTGATGCTGCCAAAGCACAAGCCAGTTT...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp AAATGTTTAACAGTGGCTGTAGACAGTCAACCCATCGAACCAGAGAAATGTTTAGGGACACATGAACACTaGTTGAGTGGTGTGGTGTAT +
Preference number: 3 (lower is better)
Translates to: KCLTVAVDSQPIEPEKCLGTHEH*LSGVVY
Trigger: ATACACCACACCACTCAACAAGTGTTCATGTGTCCC...TAAACATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR-3UTR CAA 90 bp AACATCAAAAGACCTCGTATCCAGGAATGTAACGTATATAAACAGATTGAATCCATGACTGTTGGCTTCTaGACCAGCGGCCAGACATCA +
Preference number: 3 (lower is better)
Translates to: NIKRPRIQECNVYKQIESMTVGF*TSGQTS
Trigger: TGATGTCTGGCCGCTGGTCAAGAAGCCAACAGTCAT...GGATTCAATCTGTTTATATACGTTACATTCCTGGATACGAGGTCTTTTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp AATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGACCCAGCCATGGTGGTaGCAAATACCTCAGGGAAAC +
Preference number: 3 (lower is better)
Translates to: NVTYINRLNPFVKLIGSQTQPWW*QIPQGN
Trigger: GTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGT...CTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp GATGCTGAAATACCTCACAAGAAGAATTCGGTAAGGCTATCATTCAAGACTCTAGGTTTATTCTCCCTTTaGCATCTGTGGGATACCCAG +
Preference number: 3 (lower is better)
Translates to: DAEIPHKKNSVRLSFKTLGLFSL*HLWDTQ
Trigger: CTGGGTATCCCACAGATGCAAAAGGGAGAATAAACC...TAGAGTCTTGAATGATAGCCTTACCGAATTCTTCTTGTGAGGTATTTCAGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR TCA 72 bp CTCGAGGGTCTTCTAATACTAACTAGTCAGTTACTCTaGACATCAAAAGACCTCGTATCCAGGAATGTAACG +
Preference number: 3 (lower is better)
Translates to: LEGLLILTSQLL*TSKDLVSRNVT
Trigger: CGTTACATTCCTGGATACGAGGTCTTTTGATGTTCAGAGTAACTGACTAGTTAGTATTAGAAGACCCTCGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CCA 72 bp GATTCTTTTGACAGCTCAGTTTTCCAGCCTACAAAGTaGGATTTATTATTCCTGCTACTGGCCTCACCTTAT +
Preference number: 3 (lower is better)
Translates to: DSFDSSVFQPTK*DLLFLLLASPY
Trigger: ATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAAAAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp GTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGTATTTTCTTCAGCAGTaGTGTTTTATGGGAAGGGCT +
Preference number: 3 (lower is better)
Translates to: VYKQIESLCETDWESGGMYFLQQ*CFMGRA
Trigger: AGCCCTTCCCATAAAACACAACTGCTGAAGAAAATA...CATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR TCA 72 bp AATGTCTCCCTTAATATAAAACTCCTCCTTAGTTTCTaGAGGTCTCTCCAAGGCTGTGTGGGTCTAATACTT +
Preference number: 3 (lower is better)
Translates to: NVSLNIKLLLSF*RSLQGCVGLIL
Trigger: AAGTATTAGACCCACACAGCCTTGGAGAGACCTTCAGAAACTAAGGAGGAGTTTTATATTAAGGGAGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR CCA 72 bp GTATATAAACAGATTGAATCCCTTTGTGAAACTGATTaGGAGTCAGGAGGCATGAAAATTAGTCTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: VYKQIESLCETD*ESGGMKISLAS
Trigger: AGAAGCCAGACTAATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTACCTATATTCTTGCTTaGTCAACAAGAAAAGTGCGT +
Preference number: 3 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLTYILA*STRKVR
Trigger: ACGCACTTTTCTTGTTGACAAAGCAAGAATATAGGT...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
3UTR-3UTR CAA 90 bp AACATCAAAAGACCTCGTATCCAGGAATGTAACGTATATAAACAGATTGAATCCAAACACTTGATTCTTTaGACAGCTCAGTTTTCCAGC +
Preference number: 3 (lower is better)
Translates to: NIKRPRIQECNVYKQIESKHLIL*TAQFSS
Trigger: GCTGGAAAACTGAGCTGTCAAAAGAATCAAGTGTTT...GGATTCAATCTGTTTATATACGTTACATTCCTGGATACGAGGTCTTTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR TCA 72 bp AAATGCATGTTAAAAATCATCATGACATTCACCAAATaGACTAGAAGACTCATCAGAGCAAACCCCCAAACA +
Preference number: 3 (lower is better)
Translates to: KCMLKIIMTFTK*TRRLIRANPQT
Trigger: TGTTTGGGGGTTTGCTCTGATGAGTCTTCTAGTTCATTTGGTGAATGTCATGATGATTTTTAACATGCATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp AAGGGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTCAGGGCTGCCACGGGTaGCGCCGCAACGGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: KGHLGHLLHTVSWTPFQPQGCHG*RRNGSY
Trigger: GTAGCTCCCGTTGCGGCGGCACCCGTGGCAGCCCTG...AGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCTGGCAGGGCTGCCACGGGTaGCGCCGCAACGGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: ASASKQKWDLGQVPSLLWQGCHG*RRNGSY
Trigger: GTAGCTCCCGTTGCGGCGGCACCCGTGGCAGCCCTG...CCAGAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGCGGGGGCCTCGCTGCCTaGCACCCCAAAGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: GHLGHLLHTVSWTPFQPCGGLAA*HPKGKL
Trigger: CAGCTTTCCTTTGGGGTGCCAGGCAGCGAGGCCCCC...GCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GCTGGGAGGGGGACTGGGATGCAGGATGCATCTGCGAGCCACATGACTGTTGGCCTTCTGTGCTGCCAATaGCAGCAAACGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AGRGTGMQDASASHMTVGLLCCQ*QQTAGG
Trigger: CCCACCTGCCGTTTGCTGTCATTGGCAGCACAGAAG...GCCAACAGTCATGTGGCTCGCAGATGCATCCTGCATCCCAGTCCCCCTCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGGAAACTAACAGCAACTGCGTCCGCCAGGGCTaGCACGGGTGCCGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: RWLPSHGGCKYLRETNSNCVRQG*HGCRRN
Trigger: GTTGCGGCGGCACCCGTGGCAGCCCTGGCGGACGCA...GTTGCTGTTAGTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GAGTCAGGAGGCATGAAAATTAGTCTGGCTTCTGCCTCGAAACAGAAGTGGGACGGGCCCCCTCGCCGCTaGTCCAACCCCAACCTCCCC +
Preference number: 4 (lower is better)
Translates to: ESGGMKISLASASKQKWDGPPRR*SNPNLP
Trigger: GGGGAGGTTGGGGTTGGAGCAGCGGCGAGGGGGCCC...GTCCCACTTCTGTTTCGAGGCAGAAGCCAGACTAATTTTCATGCCTCCTGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343984.5
ENST00000354416.7
CDS-3UTR GCA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATAGGGCCCCCTCGCCGCTaGTCCAACCCCAACCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMIGPPRR*SNPNLP
Trigger: GGGGAGGTTGGGGTTGGAGCAGCGGCGAGGGGGCCC...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354416.7
CDS-3UTR GCA 90 bp AAAGCTCGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACGGGCCCCCTCGCCGCTaGTCCAACCCCAACCTCCCC +
Preference number: 4 (lower is better)
Translates to: KARLKRLNGVQSSCSGEYGPPRR*SNPNLP
Trigger: GGGGAGGTTGGGGTTGGAGCAGCGGCGAGGGGGCCC...GTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCGAGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp GGACTGGAGCAGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCCAGGGCTGCCACGGGTaGCGCCGCAACGGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: GLEQLSRRLSLLESIHFIQGCHG*RRNGSY
Trigger: GTAGCTCCCGTTGCGGCGGCACCCGTGGCAGCCCTG...GATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGCGCTGCCATCGCTCCTaGGTCCGCCAGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QMQMRAPPVCNANNYRAARCHRS*VRQGCH
Trigger: GTGGCAGCCCTGGCGGACGCAGGAGCGATGGCAGCG...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGCGCGACCAAGTCCGGTaGGGGGAGGTGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKRDQVR*GEVQGR
Trigger: CCTCCCTTGCACCTCCCCCCACCGGACTTGGTCGCG...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343984.5
ENST00000354416.7
CDS-3UTR CCA 90 bp GCTGGGAGGGGGACTGGGATGCAGGATGCATCTGCGAGCCACATGACTGTTGGCGAGCCACATGACTGTTaGCTTCTTGACCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: AGRGTGMQDASASHMTVGEPHDC*LLDQRP
Trigger: TGGCCGCTGGTCAAGAAGCCAACAGTCATGTGGCTC...GCCAACAGTCATGTGGCTCGCAGATGCATCCTGCATCCCAGTCCCCCTCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GACAGCTGTGCTGATCGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGAGCAGATGGGCCCCCTaGCCATGTCACACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: DSCADRWLPSHGGCKYLRSRWAP*PCHTSG
Trigger: GCCAGAGGTGTGACATGGTCAGGGGGCCCATCTGCT...CCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCACAGCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CAAAACCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTCCTGCCTGCGTCCGCCAGGGCTaGCACGGGTGCCGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: QNLVNRTVLSYPQLRCPACVRQG*HGCRRN
Trigger: GTTGCGGCGGCACCCGTGGCAGCCCTGGCGGACGCA...GGCAGGACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp AGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATTGCGTCCGCCAGGGCTaGCACGGGTGCCGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: SSAAVFLCLKAFTSSSRDCVRQG*HGCRRN
Trigger: GTTGCGGCGGCACCCGTGGCAGCCCTGGCGGACGCA...ATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp GGGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGTTTCAACCTGCACAGTaGCCCAAGGATACTGCCGCG +
Preference number: 4 (lower is better)
Translates to: GSPRAPVTHSLLDPVPALFQPAQ*PKDTAA
Trigger: CGCGGCAGTATCCTTGGGGCACTGTGCAGGTTGAAA...CAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GACAGCTGTGCTGATCGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGTGCCGGGTGTGGGTCTaGTCCCGCAGATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: DSCADRWLPSHGGCKYLRCRVWV*SRRSSM
Trigger: CATGGAGGATCTGCGGGAGCAGACCCACACCCGGCA...CCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCACAGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CAGCTGAGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTTGCCGGGTGTGGGTCTaGTCCCGCAGATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: QLRCPAPVTYTWVSGPVVCRVWV*SRRSSM
Trigger: CATGGAGGATCTGCGGGAGCAGACCCACACCCGGCA...AACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp GGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGCCAACCTTCACCCACCTaGCGAGCTATATCGGTCGCT +
Preference number: 4 (lower is better)
Translates to: GHLGHLLHTVSWTPFQPCQPSPT*RAISVA
Trigger: AGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTG...GCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GACAAGGGAGGGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACACCCGGCTGTGTGTaGGTGGCTGGCTCCCCTTCG +
Preference number: 4 (lower is better)
Translates to: DKGGLSTSQRFPKPLSDGTPGCV*VAGSPS
Trigger: CGAAGGGGAGCCAGCCACCCACACACAGCCGGGTGT...CCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCCCTCCCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATGCATGTACCGGGCGGCGGTGTaGGGAAGTGGTGGTTACCGG +
Preference number: 4 (lower is better)
Translates to: GPFLLSGRVSSLLIGGCMYRAAV*GSGGYR
Trigger: CCGGTAACCACCACTTCCCCACACCGCCGCCCGGTA...CATGCATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCTGGTGCTGGGAGGGGGACTaGGATGCAGGATGCATCTGC +
Preference number: 4 (lower is better)
Translates to: ASASKQKWDLGQVPSLLWCWEGD*DAGCIC
Trigger: GCAGATGCATCCTGCATCCCAGTCCCCCTCCCAGCA...CCAGAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp CTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCCTTCTGTGCTGCCAATaGCAGCAAACGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LASASKQKWDLGQVPSLLLLCCQ*QQTAGG
Trigger: CCCACCTGCCGTTTGCTGTCATTGGCAGCACAGAAG...GAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GCTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTTCCGGAAATTACCCCCTCTCTTCAGAGTCTGTaGGCCTCCAGCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ATGLTLLGQYGALPEITPSLQSL*ASSLGA
Trigger: GGCTCCCAGGCTGGAGGCTCACAGACTCTGAAGAGA...GGGGGTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GCTGGGAGGGGGACTGGGATGCAGGATGCATCTGCGAGCCACATGACTGTTGGCATGCGTTGCCGATTTTaGGCACAGCTTGAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: AGRGTGMQDASASHMTVGMRCRF*AQLECS
Trigger: ACTGCACTCAAGCTGTGCTCAAAATCGGCAACGCAT...GCCAACAGTCATGTGGCTCGCAGATGCATCCTGCATCCCAGTCCCCCTCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AAGGGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTCAACCTTCACCCACCTaGCGAGCTATATCGGTCGCT +
Preference number: 4 (lower is better)
Translates to: KGHLGHLLHTVSWTPFQPQPSPT*RAISVA
Trigger: AGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTG...AGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GCTGGGAGGGGGACTGGGATGCAGGATGCATCTGCGAGCCACATGACTGTTGGCACCATGTCACACCTCTaGCAAAGATGTGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: AGRGTGMQDASASHMTVGTMSHL*QRCGGR
Trigger: TCTTCCCCCACATCTTTGCCAGAGGTGTGACATGGT...GCCAACAGTCATGTGGCTCGCAGATGCATCCTGCATCCCAGTCCCCCTCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GGACCAGGGAGGACTAGTGACTGGGATACAGGAGACCAAGGGGACAGCTGTGCTAGCTGTGCTGATCGGTaGTTACCCAGCCATGGTGGT +
Preference number: 4 (lower is better)
Translates to: GPGRTSDWDTGDQGDSCASCADR*LPSHGG
Trigger: ACCACCATGGCTGGGTAACCACCGATCAGCACAGCT...AGCACAGCTGTCCCCTTGGTCTCCTGTATCCCAGTCACTAGTCCTCCCTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GCTGGGAGGGGGACTGGGATGCAGGATGCATCTGCGAGCCACATGACTGTTGGCTCTAAGAAATGGCTGTaGCTCCTGAGGATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: AGRGTGMQDASASHMTVGSKKWL*LLRMRV
Trigger: CACCCTCATCCTCAGGAGCCACAGCCATTTCTTAGA...GCCAACAGTCATGTGGCTCGCAGATGCATCCTGCATCCCAGTCCCCCTCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGTCTCTTCAGAGTCTGTaGGCCTCCAGCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKSLQSL*ASSLGA
Trigger: GGCTCCCAGGCTGGAGGCTCACAGACTCTGAAGAGA...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TGGTGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAACAGGGCTGCCACGGGTaGCGCCGCAACGGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: WWLPVGCLSVNFWESSSEQGCHG*RRNGSY
Trigger: GTAGCTCCCGTTGCGGCGGCACCCGTGGCAGCCCTG...TTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp AGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGAAGCGCTGCCATCGCTCCTaGGTCCGCCAGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SCSGEYYSVHSHGLLQRKRCHRS*VRQGCH
Trigger: GTGGCAGCCCTGGCGGACGCAGGAGCGATGGCAGCG...CTTCCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp ACAGGACCCTGGGTCTCATGCAGCATGCAGCAAACAGCAGAGTTAATTTTTCTTCGCTGCCATCGCTCCTaGGTCCGCCAGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TGPWVSCSMQQTAELIFLRCHRS*VRQGCH
Trigger: GTGGCAGCCCTGGCGGACGCAGGAGCGATGGCAGCG...AAGAAAAATTAACTCTGCTGTTTGCTGCATGCTGCATGAGACCCAGGGTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp GGACCAGGGAGGACTAGTGACTGGGATACAGGAGACCAAGGGGACAGCTGTGCTGATGCAGGATGCATCTaGGAGCCACATGACTGTTGG +
Preference number: 4 (lower is better)
Translates to: GPGRTSDWDTGDQGDSCADAGCI*EPHDCW
Trigger: CCAACAGTCATGTGGCTCGCAGATGCATCCTGCATC...AGCACAGCTGTCCCCTTGGTCTCCTGTATCCCAGTCACTAGTCCTCCCTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCGGCATGCCTTCGTTTTaGCAGCCCTCACCCAATCCA +
Preference number: 4 (lower is better)
Translates to: VWLLPRNRSGTSVKSLPFGMPSF*QPSPNP
Trigger: TGGATTGGGTGAGGGCTGGCAAAACGAAGGCATGCC...GAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATGCATGCGCCGCTTCCCCCTATaGCCAGACCAGTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GPFLLSGRVSSLLIGGCMRRFPL*PDQFQF
Trigger: GAACTGGAACTGGTCTGGCCATAGGGGGAAGCGGCG...CATGCATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000354416.7
CDS-3UTR CCA 90 bp GACACAGGGACACATGAACACTTGTTGAGTGGTGTGGTGTATGTGTGTGTGCTTCGCGACCAAGTCCGGTaGGGGGAGGTGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: DTGTHEHLLSGVVYVCVLRDQVR*GEVQGR
Trigger: CCTCCCTTGCACCTCCCCCCACCGGACTTGGTCGCG...AAGCACACACACATACACCACACCACTCAACAAGTGTTCATGTGTCCCTGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp GTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCCAACCTTCACCCACCTaGCGAGCTATATCGGTCGCT +
Preference number: 4 (lower is better)
Translates to: VWLLPRNRSGTSVKSLPFQPSPT*RAISVA
Trigger: AGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTG...GAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GGCTGGACTCAAAGGTTAGAAGGAAAAGGCGCCAAAGGCTGTCCTTTTGAAACCACACCCGGCTGTGTGTaGGTGGCTGGCTCCCCTTCG +
Preference number: 4 (lower is better)
Translates to: GWTQRLEGKGAKGCPFETTPGCV*VAGSPS
Trigger: CGAAGGGGAGCCAGCCACCCACACACAGCCGGGTGT...GGTTTCAAAAGGACAGCCTTTGGCGCCTTTTCCTTCTAACCTTTGAGTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GGGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGGTGGTTACCCAGCCATaGTGGTTGCAAATACCTCAG +
Preference number: 4 (lower is better)
Translates to: GSPRAPVTHSLLDPVPALVVTQP*WLQIPQ
Trigger: CTGAGGTATTTGCAACCACCATGGCTGGGTAACCAC...CAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AAGGGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTCTCTCACACTGTCACTaGCCAAACACCAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: KGHLGHLLHTVSWTPFQPLSHCH*PNTKGH
Trigger: GTGGCCTTTGGTGTTTGGCCAGTGACAGTGTGAGAG...AGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CAA 72 bp CCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTaGCAGCATCACTGGGTCATTGGGTTAAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PVTHSLLDPVPA*QHHWVIGLRSW
Trigger: CCAGCTCCTTAACCCAATGACCCAGTGATGCTGCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp AGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTGTTTCTTCTCTTCAGAGTCTGTaGGCCTCCAGCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RCPAPVTYTWVSGPVVVSSLQSL*ASSLGA
Trigger: GGCTCCCAGGCTGGAGGCTCACAGACTCTGAAGAGA...AGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp ACACTTCCATTTAAAATACCATGTGAGTCAGGAAGAGAGCTTCTTGCCTGGACAGGGCCCCCTCGCCGCTaGTCCAACCCCAACCTCCCC +
Preference number: 4 (lower is better)
Translates to: TLPFKIPCESGRELLAWTGPPRR*SNPNLP
Trigger: GGGGAGGTTGGGGTTGGAGCAGCGGCGAGGGGGCCC...TGTCCAGGCAAGAAGCTCTCTTCCTGACTCACATGGTATTTTAAATGGAAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp CGTCCATTTTCCAGCTCTGATGGTTCTTTTCCTGCCTTGTTAGTTAGGACAAGACAGGGCTGCCACGGGTaGCGCCGCAACGGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: RPFSSSDGSFPALLVRTRQGCHG*RRNGSY
Trigger: GTAGCTCCCGTTGCGGCGGCACCCGTGGCAGCCCTG...TCTTGTCCTAACTAACAAGGCAGGAAAAGAACCATCAGAGCTGGAAAATGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp TGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGCGCTGCCATCGCTCCTaGGTCCGCCAGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: CTQMQMRAPPVCNANNYRRCHRS*VRQGCH
Trigger: GTGGCAGCCCTGGCGGACGCAGGAGCGATGGCAGCG...CCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGGAAACTAACAGCAACAGCTATATCGGTCGCTaGCATCGCTCCTGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: RWLPSHGGCKYLRETNSNSYIGR*HRSCVR
Trigger: GCGGACGCAGGAGCGATGGCAGCGACCGATATAGCT...GTTGCTGTTAGTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GGAGGGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGTGCCCCAAGGATACTaGCGCGCCCTCATCATCTTG +
Preference number: 4 (lower is better)
Translates to: GGLSTSQRFPKPLSDGTHVPQGY*RALIIL
Trigger: CAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCAC...ATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACTATTCAACACCCGGCTGTGTGTaGGTGGCTGGCTCCCCTTCG +
Preference number: 4 (lower is better)
Translates to: RLKRLNGVQSSCSGEYYSTPGCV*VAGSPS
Trigger: CGAAGGGGAGCCAGCCACCCACACACAGCCGGGTGT...TGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354416.7
ENST00000394610.7
ENST00000460411.5
CDS-3UTR CCA 90 bp GCTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTTCCGGAAATTACCCCCGCCTCGAAACAGAAGTaGGACCTCGGTCAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: ATGLTLLGQYGALPEITPASKQK*DLGQVP
Trigger: AGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGC...GGGGGTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GACAGCTGTGCTGATCGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGGGGAGGACTAGTGACTaGGATACAGGAGACCAAGGG +
Preference number: 4 (lower is better)
Translates to: DSCADRWLPSHGGCKYLRGRTSD*DTGDQG
Trigger: CCCTTGGTCTCCTGTATCCCAGTCACTAGTCCTCCC...CCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCACAGCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCAGCTGTCCTCTTTGTTaGTCTGGTCCCCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: VWLLPRNRSGTSVKSLPFSCPLC*SGPQSQ
Trigger: TTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCT...GAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CATTCACCAAATGAACTAGAAGACTCATCAGAGCAAACCCCCAAACACTTGATTTGCGTCCGCCAGGGCTaGCACGGGTGCCGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: HSPNELEDSSEQTPKHLICVRQG*HGCRRN
Trigger: GTTGCGGCGGCACCCGTGGCAGCCCTGGCGGACGCA...AATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTCTAGTTCATTTGGTGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGCGTAGGCCTCGAATTGTaGATCGATGAATTCCACGAT +
Preference number: 4 (lower is better)
Translates to: GHLGHLLHTVSWTPFQPCVGLEL*IDEFHD
Trigger: ATCGTGGAATTCATCGATGCACAATTCGAGGCCTAC...GCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGCCTTCGAAATGGCATCTaGTTTGGCAATGATGGGGAT +
Preference number: 4 (lower is better)
Translates to: GHLGHLLHTVSWTPFQPCLRNGI*FGNDGD
Trigger: ATCCCCATCATTGCCAAAGCAGATGCCATTTCGAAG...GCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GGCCCAGCTCTGTTGCGCAGGAAAAGGGTGTCTACAGGAAGCCCAAACAGGACCGGTTCCATTGATCTCTaGCACCGACTCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: GPALLRRKRVSTGSPNRTGSIDL*HRLIIC
Trigger: ACAGATGATGAGTCGGTGGCAGAGATCAATGGAACC...GGTCCTGTTTGGGCTTCCTGTAGACACCCTTTTCCTGCGCAACAGAGCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394610.7
CDS-3UTR GCA 90 bp AGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTGTTTCTGTGCCCCAAGGATACTaGCGCGCCCTCATCATCTTG +
Preference number: 4 (lower is better)
Translates to: RCPAPVTYTWVSGPVVVSVPQGY*RALIIL
Trigger: CAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCAC...AGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp CAGCTGAGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTGCCTCGTTTTCAACCTaGACAGTGCCCCAAGGATAC +
Preference number: 4 (lower is better)
Translates to: QLRCPAPVTYTWVSGPVVASFST*TVPQGY
Trigger: GTATCCTTGGGGCACTGTGCAGGTTGAAAACGAGGC...AACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp GAGTCAGGAGGCATGAAAATTAGTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCGCCGCTTCCCCCTATaGCCAGACCAGTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: ESGGMKISLASASKQKWDRRFPL*PDQFQF
Trigger: GAACTGGAACTGGTCTGGCCATAGGGGGAAGCGGCG...GTCCCACTTCTGTTTCGAGGCAGAAGCCAGACTAATTTTCATGCCTCCTGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343984.5
ENST00000354416.7
CDS-3UTR CCA 90 bp AGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATTTCTTCGCGACCAAGTCCGGTaGGGGGAGGTGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SRRLSLLESIHFIIQGFLRDQVR*GEVQGR
Trigger: CCTCCCTTGCACCTCCCCCCACCGGACTTGGTCGCG...AAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CCA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGCTGTGTGTGGGTGGCTaGCTCCCCTTCGAATTTGGT +
Preference number: 4 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKLCVGG*LPFEFG
Trigger: ACCAAATTCGAAGGGGAGCCAGCCACCCACACACAG...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCACTAACACCCGGCTGTGTGTaGGTGGCTGGCTCCCCTTCG +
Preference number: 4 (lower is better)
Translates to: LKTLTGLGRWNGVILPSLTPGCV*VAGSPS
Trigger: CGAAGGGGAGCCAGCCACCCACACACAGCCGGGTGT...TAGTGAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp GAGGCAGGAGCAAGTTGCGGAACTCAAAAAGAAGAAGTGAGCTTGAAGTACATGGGGGGCCTCGCTGCCTaGCACCCCAAAGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: EAGASCGTQKEEVSLKYMGGLAA*HPKGKL
Trigger: CAGCTTTCCTTTGGGGTGCCAGGCAGCGAGGCCCCC...CATGTACTTCAAGCTCACTTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCGGTGTGGGGAAGTGGTaGTTACCGGTTGGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: LASASKQKWDLGQVPSLLGVGKW*LPVGCL
Trigger: TAAACAACCAACCGGTAACCACCACTTCCCCACACC...GAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GGAGGGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGAACAGGGGAGCTGGTaGGAAAGAGTAGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: GGLSTSQRFPKPLSDGTHEQGSW*ERVADG
Trigger: CCCATCTGCTACTCTTTCCCACCAGCTCCCCTGTTC...ATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GCTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTTCCGGAAATTACCCCCCTCTCACACTGTCACTaGCCAAACACCAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ATGLTLLGQYGALPEITPLSHCH*PNTKGH
Trigger: GTGGCCTTTGGTGTTTGGCCAGTGACAGTGTGAGAG...GGGGGTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CAA 72 bp CCCACAGCTGAGGTGTCCTGCCCCAGTCACTTACACTaGGGTGAGTGGTCCTGTAGTTGTTTCTCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PTAEVSCPSHLH*GEWSCSCFSEV
Trigger: AACCTCAGAGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR TCA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGGACCCGTGGGGGCAATaGAATACAAGCAGACATGGA +
Preference number: 4 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKDPWGQ*NTSRHG
Trigger: TCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTC...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATACTTCTGTGCTGCCAATaGCAGCAAACGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMILLCCQ*QQTAGG
Trigger: CCCACCTGCCGTTTGCTGTCATTGGCAGCACAGAAG...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GAGCAGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGCTTCTGTGCTGCCAATaGCAGCAAACGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: EQLSRRLSLLESIHFIIQLLCCQ*QQTAGG
Trigger: CCCACCTGCCGTTTGCTGTCATTGGCAGCACAGAAG...CTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR TCA 90 bp GACAGCTGTGCTGATCGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGCTCCTCCTTAGTTTCTaGAGGTCTCTCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: DSCADRWLPSHGGCKYLRLLLSF*RSLQGC
Trigger: ACAGCCTTGGAGAGACCTTCAGAAACTAAGGAGGAG...CCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCACAGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GCTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTTCCGGAAATTACCCCCGGGAGTCAGGAGGCATaGAAATTAGTCTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ATGLTLLGQYGALPEITPGSQEA*KLVWLL
Trigger: CAGAAGCCAGACTAATTTTCATGCCTCCTGACTCCC...GGGGGTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCCTCACAGCAGATGGGCCCCCTaGCCATGTCACACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: AQFSSLQSGIYYSCYWPHSRWAP*PCHTSG
Trigger: GCCAGAGGTGTGACATGGTCAGGGGGCCCATCTGCT...GTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTGCGTCCGCCAGGGCTaGCACGGGTGCCGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: LICTQMQMRAPPVCNANNCVRQG*HGCRRN
Trigger: GTTGCGGCGGCACCCGTGGCAGCCCTGGCGGACGCA...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CTCTCTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCAGCTATATCGGTCGCTaGCATCGCTCCTGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: LSQNPNWSRKVEWSNFALSYIGR*HRSCVR
Trigger: GCGGACGCAGGAGCGATGGCAGCGACCGATATAGCT...GAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTTGCCGGGTGTGGGTCTaGTCCCGCAGATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: WLPVGCLSVNFWESSSEACRVWV*SRRSSM
Trigger: CATGGAGGATCTGCGGGAGCAGACCCACACCCGGCA...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TTGGAAAGAAAGTTAAGGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTGCCGGGTGTGGGTCTaGTCCCGCAGATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LERKLRAFSSLRPSLISSCRVWV*SRRSSM
Trigger: CATGGAGGATCTGCGGGAGCAGACCCACACCCGGCA...AGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCCTTAACTTTCTTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCCAAGAAACTGGCTTGTaGTTTGGCAGCATCACCTTC +
Preference number: 4 (lower is better)
Translates to: VWLLPRNRSGTSVKSLPFQETGL*FGSITF
Trigger: GAAGGTGATGCTGCCAAAGCACAAGCCAGTTTCTTG...GAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGAGCTGGCCCGGCATaGCTTCGTTTTGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: WLPVGCLSVNFWESSSEAGAGPA*LRFASP
Trigger: AGGGCTGGCAAAACGAAGGCATGCCGGGCCAGCTCC...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCTGGGACTTATTCACCAGCTaGTCAGGCAAGCTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: ASASKQKWDLGQVPSLLWDLFTS*SGKLSN
Trigger: GTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTC...CCAGAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCCTCTTTGTTGATCTaGTCCCCAAAGCCAACTGTG +
Preference number: 4 (lower is better)
Translates to: VWLLPRNRSGTSVKSLPFSSLLI*SPKPTV
Trigger: CACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGA...GAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CAGAGAGACGGCATGTTAGCCACAGATCATTGCCAGGTCAACTCCATCTCTCACAGAAGTAGGTGGTCATaGTCAGTGCCAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QRDGMLATDHCQVNSISHRSRWS*SVPVGL
Trigger: CAGCCCCACTGGCACTGACCATGACCACCTACTTCT...GTGAGAGATGGAGTTGACCTGGCAATGATCTGTGGCTAACATGCCGTCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGCATTTTCCCAAGAAACTaGCTTGTGCTTTGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GHLGHLLHTVSWTPFQPCIFPRN*LVLWQH
Trigger: ATGCTGCCAAAGCACAAGCCAGTTTCTTGGGAAAAT...GCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGCTTAAGCGTGAATTTCTaGGAAAGCAGCTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GHLGHLLHTVSWTPFQPCLSVNF*ESSSEA
Trigger: AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA...GCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CAGAGAGACGGCATGTTAGCCACAGATCATTGCCAGGTCAACTCCATCTCTCACGCCTCGAAACAGAAGTaGGACCTCGGTCAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: QRDGMLATDHCQVNSISHASKQK*DLGQVP
Trigger: AGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGC...GTGAGAGATGGAGTTGACCTGGCAATGATCTGTGGCTAACATGCCGTCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CATCACTGGGTCATTGGGTTAAGGAGCTGGCCCGGCATGCCTTCGTTTTGCCAGGGTTTCTATAAACCTTaGCAGGAAGAGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: HHWVIGLRSWPGMPSFCQGFYKP*QEERRG
Trigger: CCCTCTCCTCTCTTCCTGCCAAGGTTTATAGAAACC...CTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CAA 72 bp CATTGGGTTAAGGAGCTGGCCCGGCATGCCTTCGTTTaGCCAGCCCTCACCCAATCCATCTTCAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: HWVKELARHAFV*PALTQSIFRCF
Trigger: AAAACATCTGAAGATGGATTGGGTGAGGGCTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CAA 72 bp GCCCTGGGACTGGAGCAGCTCAGCCGCCGTCTTTCTTaGCTTGAAAGCATTCACTTCATCATCCAGGGATTT +
Preference number: 4 (lower is better)
Translates to: ALGLEQLSRRLS*LESIHFIIQGF
Trigger: AAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR TCA 90 bp GAGTCAGGAGGCATGAAAATTAGTCTGGCTTCTGCCTCGAAACAGAAGTGGGACAGCAGAAGCCCTGGCTaGCGGACTTATTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: ESGGMKISLASASKQKWDSRSPG*RTYSPA
Trigger: AGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCT...GTCCCACTTCTGTTTCGAGGCAGAAGCCAGACTAATTTTCATGCCTCCTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GTCCAGTCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACAGAGCAGAAGCCCTGGCTaGCGGACTTATTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: VQSSCSGEYYSVHSHGLQSRSPG*RTYSPA
Trigger: AGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCT...CTGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGACTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR TCA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGAGCTGTCCTCTTTGTTaGTCTGGTCCCCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKSCPLC*SGPQSQ
Trigger: TTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCT...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp CTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATTTTCTCTTCAGAGTCTGTaGGCCTCCAGCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LSRRLSLLESIHFIIQGFSLQSL*ASSLGA
Trigger: GGCTCCCAGGCTGGAGGCTCACAGACTCTGAAGAGA...AAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR TCA 90 bp GGGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGTGGCATAACCTTGTTTaGCTGTGTGCTTTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: GSPRAPVTHSLLDPVPALWHNLV*LCALKV
Trigger: TACTTTCAAAGCACACAGTCAAACAAGGTTATGCCA...CAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATGCATGCTCCTCCTTAGTTTCTaGAGGTCTCTCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPFLLSGRVSSLLIGGCMLLLSF*RSLQGC
Trigger: ACAGCCTTGGAGAGACCTTCAGAAACTAAGGAGGAG...CATGCATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCTGGTGCAGTTACTTCGAGTaGATGAAAACTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: ASASKQKWDLGQVPSLLWCSYFE*MKTGKG
Trigger: GCCCTTTCCAGTTTTCATTCACTCGAAGTAACTGCA...CCAGAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCTGGATTTTGAGCACAGCTTaGGTGCAGTTACTTCGAGTG +
Preference number: 4 (lower is better)
Translates to: ASASKQKWDLGQVPSLLWILSTA*VQLLRV
Trigger: CACTCGAAGTAACTGCACTCAAGCTGTGCTCAAAAT...CCAGAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp AAATGTTTAACAGTGGCTGTAGACAGTCAACCCATCGAACCAGAGAAATGTTTACGCTGCCATCGCTCCTaGGTCCGCCAGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KCLTVAVDSQPIEPEKCLRCHRS*VRQGCH
Trigger: GTGGCAGCCCTGGCGGACGCAGGAGCGATGGCAGCG...TAAACATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp TGGTGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAAGCTATATCGGTCGCTaGCATCGCTCCTGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: WWLPVGCLSVNFWESSSESYIGR*HRSCVR
Trigger: GCGGACGCAGGAGCGATGGCAGCGACCGATATAGCT...TTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GAGGCAGGAGCAAGTTGCGGAACTCAAAAAGAAGAAGTGAGCTTGAAGTACATGAGCTATATCGGTCGCTaGCATCGCTCCTGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: EAGASCGTQKEEVSLKYMSYIGR*HRSCVR
Trigger: GCGGACGCAGGAGCGATGGCAGCGACCGATATAGCT...CATGTACTTCAAGCTCACTTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GTGCTGATCGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGGAAACTAGCCTCGTTTTCAACCTaGACAGTGCCCCAAGGATAC +
Preference number: 4 (lower is better)
Translates to: VLIGGYPAMVVANTSGKLASFST*TVPQGY
Trigger: GTATCCTTGGGGCACTGTGCAGGTTGAAAACGAGGC...TAGTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGGCCTCGTTTTCAACCTaGACAGTGCCCCAAGGATAC +
Preference number: 4 (lower is better)
Translates to: QMQMRAPPVCNANNYRAAASFST*TVPQGY
Trigger: GTATCCTTGGGGCACTGTGCAGGTTGAAAACGAGGC...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATAGAGGCCCAGCTCTGTTaGGCAGGAAAAGGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMIEAQLC*AGKGCL
Trigger: TAGACACCCTTTTCCTGCGCAACAGAGCTGGGCCTC...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GGCTGGACTCAAAGGTTAGAAGGAAAAGGCGCCAAAGGCTGTCCTTTTGAAACCGCGGGTTGGATTGTATaGCCCCCAGGCATGTTAAGG +
Preference number: 4 (lower is better)
Translates to: GWTQRLEGKGAKGCPFETAGWIV*PPGMLR
Trigger: CCTTAACATGCCTGGGGGGCATACAATCCAACCCGC...GGTTTCAAAAGGACAGCCTTTGGCGCCTTTTCCTTCTAACCTTTGAGTCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp AGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCCTCACCTTATTGGGACAGGAGCTGGCCCGGCATaGCTTCGTTTTGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SLQSGIYYSCYWPHLIGTGAGPA*LRFASP
Trigger: AGGGCTGGCAAAACGAAGGCATGCCGGGCCAGCTCC...TGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GAGCAGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGACCCTGGGTCTCATaGAGCATGCAGCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: EQLSRRLSLLESIHFIIQGPWVS*SMQQTA
Trigger: TGCTGTTTGCTGCATGCTGCATGAGACCCAGGGTCC...CTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp AGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTGTTTCTACAGCTGAGGTGTCCTaGCCCAGTCACTTACACTTG +
Preference number: 4 (lower is better)
Translates to: RCPAPVTYTWVSGPVVVSTAEVS*PSHLHL
Trigger: CAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTGT...AGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp ACCCTGGGTCTCATGCAGCATGCAGCAAACAGCAGAGTTAATTTTTCTTCTCTTGTGCAGCCTGCACAGTaGCCCAAGGATACTGCCGCG +
Preference number: 4 (lower is better)
Translates to: TLGLMQHAANSRVNFSSLVQPAQ*PKDTAA
Trigger: CGCGGCAGTATCCTTGGGGCACTGTGCAGGCTGCAC...AAGAGAAGAAAAATTAACTCTGCTGTTTGCTGCATGCTGCATGAGACCCAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp AAAGCTCGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACACTTCTCGTGCAGCCTaGACAGTGCCCCAAGGATAC +
Preference number: 4 (lower is better)
Translates to: KARLKRLNGVQSSCSGEYTSRAA*TVPQGY
Trigger: GTATCCTTGGGGCACTGTGCAGGCTGCACGAGAAGT...GTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCGAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CCA 90 bp GCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATTTCTTCCGCCGCTTCCCCCTATaGCCAGACCAGTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: AAVFLCLKAFTSSSRDFFRRFPL*PDQFQF
Trigger: GAACTGGAACTGGTCTGGCCATAGGGGGAAGCGGCG...GAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CCA 90 bp GACAGCTGTGCTGATCGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGTTCTTCTTCTCGTCCTaGTGCAGTTTCTTCAGACGG +
Preference number: 4 (lower is better)
Translates to: DSCADRWLPSHGGCKYLRFFFSS*CSFFRR
Trigger: CCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAA...CCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCACAGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CAGCTGAGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTTTCTTCTTCTCGTCCTaGTGCAGTTTCTTCAGACGG +
Preference number: 4 (lower is better)
Translates to: QLRCPAPVTYTWVSGPVVFFFSS*CSFFRR
Trigger: CCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAA...AACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp AAGGAAAAGGCGCCAAAGGCTGTCCTTTTGAAACCCTCTAAGAAATGGCTGTGGGGCGGTGTGGGGAAGTaGTGGTTACCGGTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: KEKAPKAVLLKPSKKWLWGGVGK*WLPVGC
Trigger: ACAACCAACCGGTAACCACCACTTCCCCACACCGCC...CCACAGCCATTTCTTAGAGGGTTTCAAAAGGACAGCCTTTGGCGCCTTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GTTAAGGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATGGGAGGACTAGTGACTaGGATACAGGAGACCAAGGG +
Preference number: 4 (lower is better)
Translates to: VKGLFFSPAESHLFLLGDGRTSD*DTGDQG
Trigger: CCCTTGGTCTCCTGTATCCCAGTCACTAGTCCTCCC...ATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCCTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GACAGCTGTGCTGATCGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGAAACCCTCTAAGAAATaGCTGTGGCTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: DSCADRWLPSHGGCKYLRKPSKK*LWLLRM
Trigger: CATCCTCAGGAGCCACAGCCATTTCTTAGAGGGTTT...CCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCACAGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CAGCTGAGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTTCTCAAAACCCTAACTaGTCTCGGAAGGTGGAATGG +
Preference number: 4 (lower is better)
Translates to: QLRCPAPVTYTWVSGPVVSQNPN*SRKVEW
Trigger: CCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGA...AACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp GGACTGGAGCAGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCTGGATTACAGGACCCTaGGTCTCATGCAGCATGCAG +
Preference number: 4 (lower is better)
Translates to: GLEQLSRRLSLLESIHFIWITGP*VSCSMQ
Trigger: CTGCATGCTGCATGAGACCCAGGGTCCTGTAATCCA...GATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR TCA 90 bp CTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATGCATGCAAAAGCAGAAGCCCTGGCTaGCGGACTTATTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: LFFSPAESHLFLLGDACKSRSPG*RTYSPA
Trigger: AGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCT...TTTGCATGCATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp CAAAACCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTCCTGCCAGCAGAAGCCCTGGCTaGCGGACTTATTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: QNLVNRTVLSYPQLRCPASRSPG*RTYSPA
Trigger: AGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCT...GGCAGGACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR TCA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATAGACCCGTGGGGGCAATaGAATACAAGCAGACATGGA +
Preference number: 4 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMIDPWGQ*NTSRHG
Trigger: TCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTC...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp TTGACCAGCGGCCAGACATCACCCTCAGATTCTCAGGTTTCTATAAACCTTGGCGACCCGTGGGGGCAATaGAATACAAGCAGACATGGA +
Preference number: 4 (lower is better)
Translates to: LTSGQTSPSDSQVSINLGDPWGQ*NTSRHG
Trigger: TCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTC...GCCAAGGTTTATAGAAACCTGAGAATCTGAGGGTGATGTCTGGCCGCTGGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp TGCTCTGGTCACTCACCAATCAATAGAGCACCAAACCTACACAGCAAACCTATATCTCTTCAGAGTCTGTaGGCCTCCAGCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CSGHSPINRAPNLHSKPISLQSL*ASSLGA
Trigger: GGCTCCCAGGCTGGAGGCTCACAGACTCTGAAGAGA...TATAGGTTTGCTGTGTAGGTTTGGTGCTCTATTGATTGGTGAGTGACCAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp CGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGGAAACTAACAGCAACGTACACAAATGCAAATaGGGGCGCCTCCGGTTTGTA +
Preference number: 4 (lower is better)
Translates to: RWLPSHGGCKYLRETNSNVHKCK*GRLRFV
Trigger: TACAAACCGGAGGCGCCCTCATTTGCATTTGTGTAC...GTTGCTGTTAGTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GCTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTTCCGGAAATTACCCCCCAAAGGCTGTCCTTTTaGAACCCTCTAAGAAATGGC +
Preference number: 4 (lower is better)
Translates to: ATGLTLLGQYGALPEITPQRLSF*NPLRNG
Trigger: GCCATTTCTTAGAGGGTTTCAAAAGGACAGCCTTTG...GGGGGTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGTGCCCCAAGGATACTaGCGCGCCCTCATCATCTTG +
Preference number: 4 (lower is better)
Translates to: WLPVGCLSVNFWESSSEAVPQGY*RALIIL
Trigger: CAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCAC...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GCAAATATGAAGCCTTTCCCAAGGAGACCTGACAGGCCTAACTCAGCATCTCTCGCCTCGTTTTCAACCTaGACAGTGCCCCAAGGATAC +
Preference number: 4 (lower is better)
Translates to: ANMKPFPRRPDRPNSASLASFST*TVPQGY
Trigger: GTATCCTTGGGGCACTGTGCAGGTTGAAAACGAGGC...GAGAGATGCTGAGTTAGGCCTGTCAGGTCTCCTTGGGAAAGGCTTCATATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CAGAGAGACGGCATGTTAGCCACAGATCATTGCCAGGTCAACTCCATCTCTCACCGGTCAAACTTCTCGTaGAGCTCTTTCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QRDGMLATDHCQVNSISHRSNFS*SSFSAS
Trigger: AGAGGCAGAGAAAGAGCTGCACGAGAAGTTTGACCG...GTGAGAGATGGAGTTGACCTGGCAATGATCTGTGGCTAACATGCCGTCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GCTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTTCCGGAAATTACCCCCCATCACCTTCATACTTaGTCTGGTCACTCACCAATC +
Preference number: 4 (lower is better)
Translates to: ATGLTLLGQYGALPEITPHHLHT*SGHSPI
Trigger: GATTGGTGAGTGACCAGAGCAAGTATGAAGGTGATG...GGGGGTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACTATTCAGGCATGCCTTCGTTTTaGCAGCCCTCACCCAATCCA +
Preference number: 4 (lower is better)
Translates to: RLKRLNGVQSSCSGEYYSGMPSF*QPSPNP
Trigger: TGGATTGGGTGAGGGCTGGCAAAACGAAGGCATGCC...TGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTCGCGACCAAGTCCGGTaGGGGGAGGTGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLRDQVR*GEVQGR
Trigger: CCTCCCTTGCACCTCCCCCCACCGGACTTGGTCGCG...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343984.5
ENST00000354416.7
CDS-3UTR CCA 90 bp AGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATCAACCTTCACCCACCTaGCGAGCTATATCGGTCGCT +
Preference number: 4 (lower is better)
Translates to: SSAAVFLCLKAFTSSSRDQPSPT*RAISVA
Trigger: AGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTG...ATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CCA 90 bp CGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACTATTCACTGTGTGTGGGTGGCTaGCTCCCCTTCGAATTTGGT +
Preference number: 4 (lower is better)
Translates to: RLKRLNGVQSSCSGEYYSLCVGG*LPFEFG
Trigger: ACCAAATTCGAAGGGGAGCCAGCCACCCACACACAG...TGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354416.7
ENST00000394610.7
ENST00000460411.5
CDS-3UTR CCA 90 bp CAAAACCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTCCTGCCGTATTAGACTGGAGCTaGACACCCGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: QNLVNRTVLSYPQLRCPAVLDWS*TPGCVW
Trigger: CCACACACAGCCGGGTGTCCAGCTCCAGTCTAATAC...GGCAGGACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp TCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGGTATTAGACTGGAGCTaGACACCCGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SSCSGEYYSVHSHGLLQRVLDWS*TPGCVW
Trigger: CCACACACAGCCGGGTGTCCAGCTCCAGTCTAATAC...CCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTTAAGCGTGAATTTCTaGGAAAGCAGCTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VWLLPRNRSGTSVKSLPFLSVNF*ESSSEA
Trigger: AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA...GAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CATCACTGGGTCATTGGGTTAAGGAGCTGGCCCGGCATGCCTTCGTTTTGCCAGGTGGTGGTTACCGGTTaGTTGTTTAAGCGTGAATTT +
Preference number: 4 (lower is better)
Translates to: HHWVIGLRSWPGMPSFCQVVVTG*LFKREF
Trigger: AAATTCACGCTTAAACAACCAACCGGTAACCACCAC...CTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TTGGAAAGAAAGTTAAGGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTGGCGGTGTGGGGAAGTaGTGGTTACCGGTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LERKLRAFSSLRPSLISSGGVGK*WLPVGC
Trigger: ACAACCAACCGGTAACCACCACTTCCCCACACCGCC...AGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCCTTAACTTTCTTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGAGCTGTGCTGATCGGTaGTTACCCAGCCATGGTGGT +
Preference number: 4 (lower is better)
Translates to: SSCSGEYYSVHSHGLLQRSCADR*LPSHGG
Trigger: ACCACCATGGCTGGGTAACCACCGATCAGCACAGCT...CCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GTGCTGATCGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGGAAACTATCTAAGAAATGGCTGTaGCTCCTGAGGATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VLIGGYPAMVVANTSGKLSKKWL*LLRMRV
Trigger: CACCCTCATCCTCAGGAGCCACAGCCATTTCTTAGA...TAGTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GAGTCAGGAGGCATGAAAATTAGTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTGGCCTCACCTTATTaGGACAGTATGGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: ESGGMKISLASASKQKWDLASPY*DSMEPF
Trigger: GAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAG...GTCCCACTTCTGTTTCGAGGCAGAAGCCAGACTAATTTTCATGCCTCCTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GCAAATATGAAGCCTTTCCCAAGGAGACCTGACAGGCCTAACTCAGCATCTCTCATTGGGTTAAGGAGCTaGCCCGGCATGCCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: ANMKPFPRRPDRPNSASLIGLRS*PGMPSF
Trigger: AAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAAT...GAGAGATGCTGAGTTAGGCCTGTCAGGTCTCCTTGGGAAAGGCTTCATATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGCATCACTGGGTCATTaGGTTAAGGAGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: WLPVGCLSVNFWESSSEAASLGH*VKELAR
Trigger: CCGGGCCAGCTCCTTAACCCAATGACCCAGTGATGC...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CAGCTGAGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTAAACAGTGCTGGTTCTaGGATGTTTCTCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QLRCPAPVTYTWVSGPVVKQCWF*DVSPGE
Trigger: TTCTCCAGGAGAAACATCCCAGAACCAGCACTGTTT...AACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR TCA 90 bp AATGGAGTAATTTTGCCCTCACTAAGCTTAAACCCCCTCCCTTCTCTACCTAAGCTTCTGTGCTGCCAATaGCAGCAAACGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: NGVILPSLSLNPLPSLPKLLCCQ*QQTAGG
Trigger: CCCACCTGCCGTTTGCTGTCATTGGCAGCACAGAAG...CTTAGGTAGAGAAGGGAGGGGGTTTAAGCTTAGTGAGGGCAAAATTACTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR TCA 90 bp GTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTGGCATAACCTTGTTTaGCTGTGTGCTTTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: VWLLPRNRSGTSVKSLPFWHNLV*LCALKV
Trigger: TACTTTCAAAGCACACAGTCAAACAAGGTTATGCCA...GAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GCAAATATGAAGCCTTTCCCAAGGAGACCTGACAGGCCTAACTCAGCATCTCTCGTACACAAATGCAAATaGGGGCGCCTCCGGTTTGTA +
Preference number: 4 (lower is better)
Translates to: ANMKPFPRRPDRPNSASLVHKCK*GRLRFV
Trigger: TACAAACCGGAGGCGCCCTCATTTGCATTTGTGTAC...GAGAGATGCTGAGTTAGGCCTGTCAGGTCTCCTTGGGAAAGGCTTCATATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp TTGACAGCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGAGGGGACAGCTGTGCTaGTCGGTGGTTACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LTAQFSSLQSGIYYSCYWRGQLC*SVVTQP
Trigger: TGGCTGGGTAACCACCGATCAGCACAGCTGTCCCCT...CCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GGAGGGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATATTTTGAGCACAGCTTaGGTGCAGTTACTTCGAGTG +
Preference number: 4 (lower is better)
Translates to: GGLSTSQRFPKPLSDGTHILSTA*VQLLRV
Trigger: CACTCGAAGTAACTGCACTCAAGCTGTGCTCAAAAT...ATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GTTAAGGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATATGCGTTGCCGATTTTaGGCACAGCTTGAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: VKGLFFSPAESHLFLLGDMRCRF*AQLECS
Trigger: ACTGCACTCAAGCTGTGCTCAAAATCGGCAACGCAT...ATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCCTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp AGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTGTTTCTTGTGTGCTTGCAGTTTaGGGGGAGAGGAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: RCPAPVTYTWVSGPVVVSCVLAV*GERKLV
Trigger: AACCAATTTCCTCTCCCCTCAAACTGCAAGCACACA...AGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR TCA 90 bp GACACAGGGACACATGAACACTTGTTGAGTGGTGTGGTGTATGTGTGTGTGCTTGTTTCTCCTGGAGAATaGAAGCCCCAGAGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: DTGTHEHLLSGVVYVCVLVSPGE*KPQRGN
Trigger: ATTGCCCCTCTGGGGCTTTCATTCTCCAGGAGAAAC...AAGCACACACACATACACCACACCACTCAACAAGTGTTCATGTGTCCCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGCTTCGAAATGGCATCTaGTTTGGCAATGATGGGGAT +
Preference number: 4 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKLRNGI*FGNDGD
Trigger: ATCCCCATCATTGCCAAAGCAGATGCCATTTCGAAG...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GAGGCAGGAGCAAGTTGCGGAACTCAAAAAGAAGAAGTGAGCTTGAAGTACATGGACTGGGATGCAGGATaGATCTGCGAGCCACATGAC +
Preference number: 4 (lower is better)
Translates to: EAGASCGTQKEEVSLKYMDWDAG*ICEPHD
Trigger: GTCATGTGGCTCGCAGATGCATCCTGCATCCCAGTC...CATGTACTTCAAGCTCACTTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGGAGAGGGGAAACGTCTaGTATTTTCTTCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKERGNV*YFLQQL
Trigger: CAACTGCTGAAGAAAATAGCAGACGTTTCCCCTCTC...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CAGCTGAGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTTATCAGGCTAAACAGTaGTGGTTCTGGGATGTTTCT +
Preference number: 4 (lower is better)
Translates to: QLRCPAPVTYTWVSGPVVYQAKQ*WFWDVS
Trigger: AGAAACATCCCAGAACCAGCACTGTTTAGCCTGATA...AACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp CTCAAACAAAACCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTCGCCGCTTCCCCCTATaGCCAGACCAGTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LKQNLVNRTVLSYPQLRCRRFPL*PDQFQF
Trigger: GAACTGGAACTGGTCTGGCCATAGGGGGAAGCGGCG...ACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTGTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp AGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTGTTTCTGACTTATTCACCAGCTaGTCAGGCAAGCTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: RCPAPVTYTWVSGPVVVSDLFTS*SGKLSN
Trigger: GTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTC...AGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp GCAAATATGAAGCCTTTCCCAAGGAGACCTGACAGGCCTAACTCAGCATCTCTCTTGAAGCAGAAGCCCTaGCTGACGGACTTATTCACC +
Preference number: 4 (lower is better)
Translates to: ANMKPFPRRPDRPNSASLLKQKP*LTDLFT
Trigger: GGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAA...GAGAGATGCTGAGTTAGGCCTGTCAGGTCTCCTTGGGAAAGGCTTCATATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTACACCCGGCTGTGTGTaGGTGGCTGGCTCCCCTTCG +
Preference number: 4 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLTPGCV*VAGSPS
Trigger: CGAAGGGGAGCCAGCCACCCACACACAGCCGGGTGT...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATTTGTATTAGACTGGAGCTaGACACCCGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSRRLSLLESIHFIIQGFVLDWS*TPGCVW
Trigger: CCACACACAGCCGGGTGTCCAGCTCCAGTCTAATAC...AAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CCA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTGGGGGCCTCGCTGCCTaGCACCCCAAAGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLGGLAA*HPKGKL
Trigger: CAGCTTTCCTTTGGGGTGCCAGGCAGCGAGGCCCCC...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GTTTATTCTCCCTTTTGCATCTGTGGGATACCCAGAGTTAGAGAGAGGGGAAACAGAAGTAGGTGGTCATaGTCAGTGCCAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VYSPFCICGIPRVRERGNRSRWS*SVPVGL
Trigger: CAGCCCCACTGGCACTGACCATGACCACCTACTTCT...GTTTCCCCTCTCTCTAACTCTGGGTATCCCACAGATGCAAAAGGGAGAATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GCAAATATGAAGCCTTTCCCAAGGAGACCTGACAGGCCTAACTCAGCATCTCTCGGTGTGGGGAAGTGGTaGTTACCGGTTGGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: ANMKPFPRRPDRPNSASLGVGKW*LPVGCL
Trigger: TAAACAACCAACCGGTAACCACCACTTCCCCACACC...GAGAGATGCTGAGTTAGGCCTGTCAGGTCTCCTTGGGAAAGGCTTCATATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACTATTCACTGGAACAGGGGAGCTaGTGGGAAAGAGTAGCAGAT +
Preference number: 4 (lower is better)
Translates to: RLKRLNGVQSSCSGEYYSLEQGS*WERVAD
Trigger: ATCTGCTACTCTTTCCCACCAGCTCCCCTGTTCCAG...TGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCCTCACAACAGCAACCAGAACTaGAACAGGGGAGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: AQFSSLQSGIYYSCYWPHNSNQN*NRGAGG
Trigger: CCCACCAGCTCCCCTGTTCCAGTTCTGGTTGCTGTT...GTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CAA 72 bp GCTTCTTGCCTGGACACAGGGACACATGAACACTTGTaGAGTGGTGTGGTGTATGTGTGTGTGCTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: ASCLDTGTHEHL*SGVVYVCVLAV
Trigger: AACTGCAAGCACACACACATACACCACACCACTCAACAAGTGTTCATGTGTCCCTGTGTCCAGGCAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR CAA 72 bp AGAGCTTCTTGCCTGGACACAGGGACACATGAACACTaGTTGAGTGGTGTGGTGTATGTGTGTGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: RASCLDTGTHEH*LSGVVYVCVLA
Trigger: TGCAAGCACACACACATACACCACACCACTCAACAAGTGTTCATGTGTCCCTGTGTCCAGGCAAGAAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR CAA 72 bp GTGGGATTTATTATTCCTGCTACTGGCCTCACCTTATaGGGACAGTATGGAGCCCTTCCGGAAATTACCCCC +
Preference number: 4 (lower is better)
Translates to: VGFIIPATGLTL*GQYGALPEITP
Trigger: GGGGGTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
3UTR CAA 72 bp TGGGACTGGAGCAGCTCAGCCGCCGTCTTTCTTTGCTaGAAAGCATTCACTTCATCATCCAGGGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: WDWSSSAAVFLC*KAFTSSSRDFF
Trigger: GAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR TCA 90 bp GCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATTTCTTCGACCCGTGGGGGCAATaGAATACAAGCAGACATGGA +
Preference number: 4 (lower is better)
Translates to: AAVFLCLKAFTSSSRDFFDPWGQ*NTSRHG
Trigger: TCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTC...GAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR TCA 90 bp CGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACTATTCAGTACACAAATGCAAATaGGGGCGCCTCCGGTTTGTA +
Preference number: 4 (lower is better)
Translates to: RLKRLNGVQSSCSGEYYSVHKCK*GRLRFV
Trigger: TACAAACCGGAGGCGCCCTCATTTGCATTTGTGTAC...TGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp CATTCACCAAATGAACTAGAAGACTCATCAGAGCAAACCCCCAAACACTTGATTAGGGGACAGCTGTGCTaGTCGGTGGTTACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HSPNELEDSSEQTPKHLIRGQLC*SVVTQP
Trigger: TGGCTGGGTAACCACCGATCAGCACAGCTGTCCCCT...AATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTCTAGTTCATTTGGTGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GACAGCTGTGCTGATCGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGACTAGTCAGTTACTCTaGACATCAAAAGACCTCGTA +
Preference number: 4 (lower is better)
Translates to: DSCADRWLPSHGGCKYLRTSQLL*TSKDLV
Trigger: TACGAGGTCTTTTGATGTTCAGAGTAACTGACTAGT...CCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCACAGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp CGTCCATTTTCCAGCTCTGATGGTTCTTTTCCTGCCTTGTTAGTTAGGACAAGATTTCATACCCACAGCTaGGGTGTCCTGCCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: RPFSSSDGSFPALLVRTRFHTHS*GVLPQS
Trigger: TGACTGGGGCAGGACACCTCAGCTGTGGGTATGAAA...TCTTGTCCTAACTAACAAGGCAGGAAAAGAACCATCAGAGCTGGAAAATGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp AGTCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACAGGACCGGTTCCATTGATCTCTaGCACCGACTCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: SPAVAGNTIQYTAMDYRTGSIDL*HRLIIC
Trigger: ACAGATGATGAGTCGGTGGCAGAGATCAATGGAACC...GGTCCTGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp CGTCCATTTTCCAGCTCTGATGGTTCTTTTCCTGCCTTGTTAGTTAGGACAAGATTTCAACCTGCACAGTaGCCCAAGGATACTGCCGCG +
Preference number: 4 (lower is better)
Translates to: RPFSSSDGSFPALLVRTRFQPAQ*PKDTAA
Trigger: CGCGGCAGTATCCTTGGGGCACTGTGCAGGTTGAAA...TCTTGTCCTAACTAACAAGGCAGGAAAAGAACCATCAGAGCTGGAAAATGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp CAAAACCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTCCTGCCCGGTCAAACTTCTCGTaGAGCTCTTTCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QNLVNRTVLSYPQLRCPARSNFS*SSFSAS
Trigger: AGAGGCAGAGAAAGAGCTGCACGAGAAGTTTGACCG...GGCAGGACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp TGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGGACCCTGGGTCTCATaGAGCATGCAGCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: CTQMQMRAPPVCNANNYRGPWVS*SMQQTA
Trigger: TGCTGTTTGCTGCATGCTGCATGAGACCCAGGGTCC...CCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394610.7
CDS-3UTR GCA 90 bp CTCTCTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCAGGAAGAGAGCTTCTTaGCTGGACACAGGGACACAT +
Preference number: 4 (lower is better)
Translates to: LSQNPNWSRKVEWSNFALRKRAS*LDTGTH
Trigger: ATGTGTCCCTGTGTCCAGGCAAGAAGCTCTCTTCCT...GAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp CGTCCATTTTCCAGCTCTGATGGTTCTTTTCCTGCCTTGTTAGTTAGGACAAGACAACCTTCACCCACCTaGCGAGCTATATCGGTCGCT +
Preference number: 4 (lower is better)
Translates to: RPFSSSDGSFPALLVRTRQPSPT*RAISVA
Trigger: AGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTG...TCTTGTCCTAACTAACAAGGCAGGAAAAGAACCATCAGAGCTGGAAAATGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp AGCGGGGAATACTATTCAGTACACAGCCATGGATTACAGGACCCTGGGTCTCATGACTTATTCACCAGCTaGTCAGGCAAGCTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: SGEYYSVHSHGLQDPGSHDLFTS*SGKLSN
Trigger: GTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTC...ATGAGACCCAGGGTCCTGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CCA 90 bp AATGGAGTAATTTTGCCCTCACTAAGCTTAAACCCCCTCCCTTCTCTACCTAAGCTGTGTGTGGGTGGCTaGCTCCCCTTCGAATTTGGT +
Preference number: 4 (lower is better)
Translates to: NGVILPSLSLNPLPSLPKLCVGG*LPFEFG
Trigger: ACCAAATTCGAAGGGGAGCCAGCCACCCACACACAG...CTTAGGTAGAGAAGGGAGGGGGTTTAAGCTTAGTGAGGGCAAAATTACTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp GAGTCAGGAGGCATGAAAATTAGTCTGGCTTCTGCCTCGAAACAGAAGTGGGACTCCTCTTTGTTGATCTaGTCCCCAAAGCCAACTGTG +
Preference number: 4 (lower is better)
Translates to: ESGGMKISLASASKQKWDSSLLI*SPKPTV
Trigger: CACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGA...GTCCCACTTCTGTTTCGAGGCAGAAGCCAGACTAATTTTCATGCCTCCTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GTCCAGTCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACAGTCCTCTTTGTTGATCTaGTCCCCAAAGCCAACTGTG +
Preference number: 4 (lower is better)
Translates to: VQSSCSGEYYSVHSHGLQSSLLI*SPKPTV
Trigger: CACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGA...CTGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGACTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CCA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGTTCTCTTTGACTCGCTaGACGAACATCTGTCTCATC +
Preference number: 4 (lower is better)
Translates to: QMQMRAPPVCNANNYRAAFSLTR*TNICLI
Trigger: GATGAGACAGATGTTCGTCCAGCGAGTCAAAGAGAA...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GTTAAGGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATTTCTTCTTCTCGTCCTaGTGCAGTTTCTTCAGACGG +
Preference number: 4 (lower is better)
Translates to: VKGLFFSPAESHLFLLGDFFFSS*CSFFRR
Trigger: CCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAA...ATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCCTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TGCTCTGGTCACTCACCAATCAATAGAGCACCAAACCTACACAGCAAACCTATAAGAAGTAGGTGGTCATaGTCAGTGCCAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CSGHSPINRAPNLHSKPIRSRWS*SVPVGL
Trigger: CAGCCCCACTGGCACTGACCATGACCACCTACTTCT...TATAGGTTTGCTGTGTAGGTTTGGTGCTCTATTGATTGGTGAGTGACCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGTGCTGGGAGGGGGACTaGGATGCAGGATGCATCTGC +
Preference number: 4 (lower is better)
Translates to: VYKQIESLCETDWESGGMCWEGD*DAGCIC
Trigger: GCAGATGCATCCTGCATCCCAGTCCCCCTCCCAGCA...CATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GGGATTTATTATTCCTGCTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTACCATGTCACACCTCTaGCAAAGATGTGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GIYYSCYWPHLIGTVWSPTMSHL*QRCGGR
Trigger: TCTTCCCCCACATCTTTGCCAGAGGTGTGACATGGT...AGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AAGGAAAAGGCGCCAAAGGCTGTCCTTTTGAAACCCTCTAAGAAATGGCTGTGGGTGGTTACCCAGCCATaGTGGTTGCAAATACCTCAG +
Preference number: 4 (lower is better)
Translates to: KEKAPKAVLLKPSKKWLWVVTQP*WLQIPQ
Trigger: CTGAGGTATTTGCAACCACCATGGCTGGGTAACCAC...CCACAGCCATTTCTTAGAGGGTTTCAAAAGGACAGCCTTTGGCGCCTTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATTTCAGTACACAGCCATaGATTACAGGACCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SSAAVFLCLKAFTSSSRDFSTQP*ITGPWV
Trigger: GACCCAGGGTCCTGTAATCCATGGCTGTGTACTGAA...ATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
3UTR CAA 72 bp ACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTaGCCCTCACTAAGCTTAAACCCCCTCCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TLTGLGRWNGVI*PSLSLNPLPSL
Trigger: TAGAGAAGGGAGGGGGTTTAAGCTTAGTGAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR TCA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGTGGCATAACCTTGTTTaGCTGTGTGCTTTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKWHNLV*LCALKV
Trigger: TACTTTCAAAGCACACAGTCAAACAAGGTTATGCCA...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GGAGGGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATTACTCCACTGTAACTTaGATTTTCCCAAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: GGLSTSQRFPKPLSDGTHYSTVT*IFPRNW
Trigger: CCAGTTTCTTGGGAAAATTCAAGTTACAGTGGAGTA...ATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp AAATGTTTAACAGTGGCTGTAGACAGTCAACCCATCGAACCAGAGAAATGTTTAGCCCCAGAGGGGCAATaGCTGGTCACACCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: KCLTVAVDSQPIEPEKCLAPEGQ*LVTPLS
Trigger: GCTCAAAGGTGTGACCAGTCATTGCCCCTCTGGGGC...TAAACATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp CGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATTTCTTCTTATCAGCTATATCGGTCGCTaGCATCGCTCCTGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: RLSLLESIHFIIQGFLLISYIGR*HRSCVR
Trigger: GCGGACGCAGGAGCGATGGCAGCGACCGATATAGCT...GATAAGAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp GTCCAGTCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACAGGTAGGCCTCGAATTGTaGATCGATGAATTCCACGAT +
Preference number: 4 (lower is better)
Translates to: VQSSCSGEYYSVHSHGLQVGLEL*IDEFHD
Trigger: ATCGTGGAATTCATCGATGCACAATTCGAGGCCTAC...CTGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGACTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp CGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACTATTCACAAGAAACTGGCTTGTaGTTTGGCAGCATCACCTTC +
Preference number: 4 (lower is better)
Translates to: RLKRLNGVQSSCSGEYYSQETGL*FGSITF
Trigger: GAAGGTGATGCTGCCAAAGCACAAGCCAGTTTCTTG...TGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GAAGACTCATCAGAGCAAACCCCCAAACACTTGATTCTTTTGACAGCTCAGTTTGAGGCCCAGCTCTGTTaGGCAGGAAAAGGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: EDSSEQTPKHLILLTAQFEAQLC*AGKGCL
Trigger: TAGACACCCTTTTCCTGCGCAACAGAGCTGGGCCTC...AAACTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CTCAAACAAAACCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTGGACCCTGGGTCTCATaGAGCATGCAGCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: LKQNLVNRTVLSYPQLRCGPWVS*SMQQTA
Trigger: TGCTGTTTGCTGCATGCTGCATGAGACCCAGGGTCC...ACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTGTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp ACAGGACCCTGGGTCTCATGCAGCATGCAGCAAACAGCAGAGTTAATTTTTCTTTTGAAGCAGAAGCCCTaGCTGACGGACTTATTCACC +
Preference number: 4 (lower is better)
Translates to: TGPWVSCSMQQTAELIFLLKQKP*LTDLFT
Trigger: GGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAA...AAGAAAAATTAACTCTGCTGTTTGCTGCATGCTGCATGAGACCCAGGGTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CCA 90 bp TTGACAGCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCTGTGTGTGGGTGGCTaGCTCCCCTTCGAATTTGGT +
Preference number: 4 (lower is better)
Translates to: LTAQFSSLQSGIYYSCYWLCVGG*LPFEFG
Trigger: ACCAAATTCGAAGGGGAGCCAGCCACCCACACACAG...CCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TTGACAGCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGGTATTAGACTGGAGCTaGACACCCGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LTAQFSSLQSGIYYSCYWVLDWS*TPGCVW
Trigger: CCACACACAGCCGGGTGTCCAGCTCCAGTCTAATAC...CCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACTATTCATTCTTCTTCTCGTCCTaGTGCAGTTTCTTCAGACGG +
Preference number: 4 (lower is better)
Translates to: RLKRLNGVQSSCSGEYYSFFFSS*CSFFRR
Trigger: CCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAA...TGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354416.7
ENST00000394610.7
ENST00000460411.5
CDS-3UTR CCA 90 bp GCAAATATGAAGCCTTTCCCAAGGAGACCTGACAGGCCTAACTCAGCATCTCTCAACTGGCTTGTGCTTTaGCAGCATCACCTTCATACT +
Preference number: 4 (lower is better)
Translates to: ANMKPFPRRPDRPNSASLNWLVL*QHHLHT
Trigger: AGTATGAAGGTGATGCTGCCAAAGCACAAGCCAGTT...GAGAGATGCTGAGTTAGGCCTGTCAGGTCTCCTTGGGAAAGGCTTCATATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGGTGGTGGTTACCGGTTaGTTGTTTAAGCGTGAATTT +
Preference number: 4 (lower is better)
Translates to: QMQMRAPPVCNANNYRAAVVVTG*LFKREF
Trigger: AAATTCACGCTTAAACAACCAACCGGTAACCACCAC...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GTTTATTCTCCCTTTTGCATCTGTGGGATACCCAGAGTTAGAGAGAGGGGAAACGGTGTGGGGAAGTGGTaGTTACCGGTTGGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: VYSPFCICGIPRVRERGNGVGKW*LPVGCL
Trigger: TAAACAACCAACCGGTAACCACCACTTCCCCACACC...GTTTCCCCTCTCTCTAACTCTGGGTATCCCACAGATGCAAAAGGGAGAATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGTACCGGGCGGCGGTGTaGGGAAGTGGTGGTTACCGG +
Preference number: 4 (lower is better)
Translates to: NVTYINRLNPFVKLIGSQYRAAV*GSGGYR
Trigger: CCGGTAACCACCACTTCCCCACACCGCCGCCCGGTA...CTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCCTCACGTTACCCAGCCATGGTaGTTGCAAATACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AQFSSLQSGIYYSCYWPHVTQPW*LQIPQG
Trigger: TCCCTGAGGTATTTGCAACCACCATGGCTGGGTAAC...GTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GTTTATTCTCCCTTTTGCATCTGTGGGATACCCAGAGTTAGAGAGAGGGGAAACGTTACCCAGCCATGGTaGTTGCAAATACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VYSPFCICGIPRVRERGNVTQPW*LQIPQG
Trigger: TCCCTGAGGTATTTGCAACCACCATGGCTGGGTAAC...GTTTCCCCTCTCTCTAACTCTGGGTATCCCACAGATGCAAAAGGGAGAATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGGAAACTAACAGCAACAAAACTGGAAAGGGCTaGACTCAAAGGTTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: RWLPSHGGCKYLRETNSNKTGKG*TQRLEG
Trigger: TCCTTCTAACCTTTGAGTCCAGCCCTTTCCAGTTTT...GTTGCTGTTAGTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATACGAGTGAATGAAAACTaGAAAGGGCTGGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMIRVNEN*KGLDSK
Trigger: CTTTGAGTCCAGCCCTTTCCAGTTTTCATTCACTCG...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GCTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTTCCGGAAATTACCCCCTTCCAGCCTACAAAGTaGGATTTATTATTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: ATGLTLLGQYGALPEITPFQPTK*DLLFLL
Trigger: TAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAA...GGGGGTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CAAAACCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTCCTGCCCAGGCTAAACAGTGCTaGTTCTGGGATGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QNLVNRTVLSYPQLRCPAQAKQC*FWDVSP
Trigger: AGGAGAAACATCCCAGAACCAGCACTGTTTAGCCTG...GGCAGGACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR TCA 90 bp CCCTGGGTCTCATGCAGCATGCAGCAAACAGCAGAGTTAATTTTTCTTCTCTTTAGCTGTCCTCTTTGTTaGTCTGGTCCCCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: PWVSCSMQQTAELIFLLFSCPLC*SGPQSQ
Trigger: TTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCT...AAAGAGAAGAAAAATTAACTCTGCTGTTTGCTGCATGCTGCATGAGACCCAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR TCA 90 bp CTCAAACAAAACCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTGACCCGTGGGGGCAATaGAATACAAGCAGACATGGA +
Preference number: 4 (lower is better)
Translates to: LKQNLVNRTVLSYPQLRCDPWGQ*NTSRHG
Trigger: TCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTC...ACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTGTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR TCA 90 bp CTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATGCATGCAAACAAAGGCTGTCCTTTTaGAACCCTCTAAGAAATGGC +
Preference number: 4 (lower is better)
Translates to: LFFSPAESHLFLLGDACKQRLSF*NPLRNG
Trigger: GCCATTTCTTAGAGGGTTTCAAAAGGACAGCCTTTG...TTTGCATGCATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp CTCTCTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCTCCATTTTCCAGCTCTaGTGGTTCTTTTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LSQNPNWSRKVEWSNFALSIFQL*WFFSCL
Trigger: AAGGCAGGAAAAGAACCATCAGAGCTGGAAAATGGA...GAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp GTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGCGCAACGGGAGCTACTaGACAGGAAACAGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VYKQIESLCETDWESGGMRNGSY*TGNRGA
Trigger: AGCTCCTCTGTTTCCTGTGCAGTAGCTCCCGTTGCG...CATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343984.5
ENST00000354416.7
CDS-3UTR GCA 90 bp CTCTCTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCGTAGGCCTCGAATTGTaGATCGATGAATTCCACGAT +
Preference number: 4 (lower is better)
Translates to: LSQNPNWSRKVEWSNFALVGLEL*IDEFHD
Trigger: ATCGTGGAATTCATCGATGCACAATTCGAGGCCTAC...GAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp GAGCAGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGCCCTCATCATCTTGTTaGCTATCTTCAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EQLSRRLSLLESIHFIIQPSSSC*LSSVLL
Trigger: CAGAAGAACTGAAGATAGGCAACAAGATGATGAGGG...CTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATGTGCCCCAAGGATACTaGCGCGCCCTCATCATCTTG +
Preference number: 4 (lower is better)
Translates to: LICTQMQMRAPPVCNANNVPQGY*RALIIL
Trigger: CAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCAC...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TTGCTTGAAAGCATTCACTTCATCATCCAGGGATTTCTTCTTATCCTCCAGTTTGTGCCCCAAGGATACTaGCGCGCCCTCATCATCTTG +
Preference number: 4 (lower is better)
Translates to: LLESIHFIIQGFLLILQFVPQGY*RALIIL
Trigger: CAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCAC...AAACTGGAGGATAAGAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp GTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGTTTCAACCTGCACAGTaGCCCAAGGATACTGCCGCG +
Preference number: 4 (lower is better)
Translates to: VYKQIESLCETDWESGGMFQPAQ*PKDTAA
Trigger: CGCGGCAGTATCCTTGGGGCACTGTGCAGGTTGAAA...CATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTTTCTTCTCGTCCTGGTaGAGTTTCTTCAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: WLPVGCLSVNFWESSSEAFFSSW*SFFRRS
Trigger: TGACCGTCTGAAGAAACTGCACCAGGACGAGAAGAA...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GAGGCAGGAGCAAGTTGCGGAACTCAAAAAGAAGAAGTGAGCTTGAAGTACATGTTCTTCTCGTCCTGGTaGAGTTTCTTCAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: EAGASCGTQKEEVSLKYMFFSSW*SFFRRS
Trigger: TGACCGTCTGAAGAAACTGCACCAGGACGAGAAGAA...CATGTACTTCAAGCTCACTTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp AGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATGCCGCCGTCTTTCTTTaGTTGAAAGCATTCACTTCA +
Preference number: 4 (lower is better)
Translates to: SSAAVFLCLKAFTSSSRDAAVFL*LKAFTS
Trigger: TGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGC...ATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp GGGATTTATTATTCCTGCTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTCATCACCTTCATACTTaGTCTGGTCACTCACCAATC +
Preference number: 4 (lower is better)
Translates to: GIYYSCYWPHLIGTVWSPHHLHT*SGHSPI
Trigger: GATTGGTGAGTGACCAGAGCAAGTATGAAGGTGATG...AGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GAAATACCTCACAAGAAGAATTCGGTAAGGCTATCATTCAAGACTCTAGGCTGGGATGCAGGATGCATCTaGGAGCCACATGACTGTTGG +
Preference number: 4 (lower is better)
Translates to: EIPHKKNSVRLSFKTLGWDAGCI*EPHDCW
Trigger: CCAACAGTCATGTGGCTCGCAGATGCATCCTGCATC...CCAGCCTAGAGTCTTGAATGATAGCCTTACCGAATTCTTCTTGTGAGGTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GTTAAGGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATGTTTATTCTCCCTTTTaGATCTGTGGGATACCCAGA +
Preference number: 4 (lower is better)
Translates to: VKGLFFSPAESHLFLLGDVYSPF*ICGIPR
Trigger: TCTGGGTATCCCACAGATGCAAAAGGGAGAATAAAC...ATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCCTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CAGTACACAGCCATGGATTACTGCAAAGGAAGGGCAGAGAGACGGCATGTTAGCGGGATTTATTATTCCTaGTACTGGCCTCACCTTATT +
Preference number: 4 (lower is better)
Translates to: QYTAMDYCKGRAERRHVSGIYYS*YWPHLI
Trigger: AATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCC...GCTAACATGCCGTCTCTCTGCCCTTCCTTTGCAGTAATCCATGGCTGTGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGACTTATTCACCAGCTaGTCAGGCAAGCTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: WLPVGCLSVNFWESSSEADLFTS*SGKLSN
Trigger: GTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTC...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TGGTGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGACTTATTCACCAGCTaGTCAGGCAAGCTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: WWLPVGCLSVNFWESSSEDLFTS*SGKLSN
Trigger: GTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTC...TTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGGTATTAGACTGGAGCTaGACACCCGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VYKQIESLCETDWESGGMVLDWS*TPGCVW
Trigger: CCACACACAGCCGGGTGTCCAGCTCCAGTCTAATAC...CATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GTTTATTCTCCCTTTTGCATCTGTGGGATACCCAGAGTTAGAGAGAGGGGAAACTCCTCTTTGTTGATCTaGTCCCCAAAGCCAACTGTG +
Preference number: 4 (lower is better)
Translates to: VYSPFCICGIPRVRERGNSSLLI*SPKPTV
Trigger: CACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGA...GTTTCCCCTCTCTCTAACTCTGGGTATCCCACAGATGCAAAAGGGAGAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AATGGAGTAATTTTGCCCTCACTAAGCTTAAACCCCCTCCCTTCTCTACCTAAGTTCACAAAGTCGCAGTaGGCCTCGTTTTCAACCTGC +
Preference number: 4 (lower is better)
Translates to: NGVILPSLSLNPLPSLPKFTKSQ*ASFSTC
Trigger: GCAGGTTGAAAACGAGGCCCACTGCGACTTTGTGAA...CTTAGGTAGAGAAGGGAGGGGGTTTAAGCTTAGTGAGGGCAAAATTACTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp AAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGAAAATTGGCGGTGTGGGGAAGTaGTGGTTACCGGTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: KQIESLCETDWESGGMKIGGVGK*WLPVGC
Trigger: ACAACCAACCGGTAACCACCACTTCCCCACACCGCC...AATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGGAGCCACATGACTGTTaGCTTCTTGACCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: VYKQIESLCETDWESGGMEPHDC*LLDQRP
Trigger: TGGCCGCTGGTCAAGAAGCCAACAGTCATGTGGCTC...CATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GAAGACTCATCAGAGCAAACCCCCAAACACTTGATTCTTTTGACAGCTCAGTTTCTGGAACAGGGGAGCTaGTGGGAAAGAGTAGCAGAT +
Preference number: 4 (lower is better)
Translates to: EDSSEQTPKHLILLTAQFLEQGS*WERVAD
Trigger: ATCTGCTACTCTTTCCCACCAGCTCCCCTGTTCCAG...AAACTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGAGCAGTTGTGTTTTATaGGAAGGGCTTGGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: QMQMRAPPVCNANNYRAASSCVL*EGLGVN
Trigger: ATTTACACCAAGCCCTTCCCATAAAACACAACTGCT...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACTATTCACTTATTGGGACAGTATaGAGCCCTTCCGGAAATTAC +
Preference number: 4 (lower is better)
Translates to: RLKRLNGVQSSCSGEYYSLIGTV*SPSGNY
Trigger: GTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAG...TGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TTGACAGCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGATTGGGTTAAGGAGCTaGCCCGGCATGCCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: LTAQFSSLQSGIYYSCYWIGLRS*PGMPSF
Trigger: AAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAAT...CCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGAAAATTGCATCACTGGGTCATTaGGTTAAGGAGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KQIESLCETDWESGGMKIASLGH*VKELAR
Trigger: CCGGGCCAGCTCCTTAACCCAATGACCCAGTGATGC...AATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TTGACCAGCGGCCAGACATCACCCTCAGATTCTCAGGTTTCTATAAACCTTGGCGGAAAGCAAACTTCTTaGCTTAAGAGAAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LTSGQTSPSDSQVSINLGGKQTS*LKRSEG
Trigger: TCCCTCACTTCTCTTAAGCCAAGAAGTTTGCTTTCC...GCCAAGGTTTATAGAAACCTGAGAATCTGAGGGTGATGTCTGGCCGCTGGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATAGGAAAGCAAACTTCTTaGCTTAAGAGAAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMIGKQTS*LKRSEG
Trigger: TCCCTCACTTCTCTTAAGCCAAGAAGTTTGCTTTCC...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GACACAGGGACACATGAACACTTGTTGAGTGGTGTGGTGTATGTGTGTGTGCTTTCTCGGAAGGTGGAATaGAGTAATTTTGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: DTGTHEHLLSGVVYVCVLSRKVE*SNFALT
Trigger: AGTGAGGGCAAAATTACTCCATTCCACCTTCCGAGA...AAGCACACACACATACACCACACCACTCAACAAGTGTTCATGTGTCCCTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR CAA 72 bp TTTACCAACATCAAAGCTCTCCCTCCAGATCCCAGGTaGAGCAGAAACCTCTCTCAAAACCCTAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: FTNIKALPPDPR*SRNLSQNPNWS
Trigger: AGACCAGTTAGGGTTTTGAGAGAGGTTTCTGCTCAACCTGGGATCTGGAGGGAGAGCTTTGATGTTGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR TCA 90 bp TCAGAAATGTTTAACAGTGGCTGTAGACAGTCAACCCATCGAACCAGAGAAATGAGCTGTCCTCTTTGTTaGTCTGGTCCCCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SEMFNSGCRQSTHRTREMSCPLC*SGPQSQ
Trigger: TTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCT...CATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR TCA 90 bp GAGTCAGGAGGCATGAAAATTAGTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCCGTCTTTCTTTGCTTaGAAGCATTCACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: ESGGMKISLASASKQKWDPSFFA*KHSLHH
Trigger: ATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGG...GTCCCACTTCTGTTTCGAGGCAGAAGCCAGACTAATTTTCATGCCTCCTGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATATACTCCACTGTAACTTaGATTTTCCCAAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMIYSTVT*IFPRNW
Trigger: CCAGTTTCTTGGGAAAATTCAAGTTACAGTGGAGTA...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp AGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGAAGTGCAGTTACTTCGAGTaGATGAAAACTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: SCSGEYYSVHSHGLLQRKCSYFE*MKTGKG
Trigger: GCCCTTTCCAGTTTTCATTCACTCGAAGTAACTGCA...CTTCCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp CAGAGAGACGGCATGTTAGCCACAGATCATTGCCAGGTCAACTCCATCTCTCACATGACATTCACCAAATaGACTAGAAGACTCATCAGA +
Preference number: 4 (lower is better)
Translates to: QRDGMLATDHCQVNSISHMTFTK*TRRLIR
Trigger: TCTGATGAGTCTTCTAGTTCATTTGGTGAATGTCAT...GTGAGAGATGGAGTTGACCTGGCAATGATCTGTGGCTAACATGCCGTCTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GAGGCAGGAGCAAGTTGCGGAACTCAAAAAGAAGAAGTGAGCTTGAAGTACATGGTAGGCCTCGAATTGTaGATCGATGAATTCCACGAT +
Preference number: 4 (lower is better)
Translates to: EAGASCGTQKEEVSLKYMVGLEL*IDEFHD
Trigger: ATCGTGGAATTCATCGATGCACAATTCGAGGCCTAC...CATGTACTTCAAGCTCACTTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp AGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGAAGGTAGGCCTCGAATTGTaGATCGATGAATTCCACGAT +
Preference number: 4 (lower is better)
Translates to: SCSGEYYSVHSHGLLQRKVGLEL*IDEFHD
Trigger: ATCGTGGAATTCATCGATGCACAATTCGAGGCCTAC...CTTCCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp ACAGGACCCTGGGTCTCATGCAGCATGCAGCAAACAGCAGAGTTAATTTTTCTTCTTCGAAATGGCATCTaGTTTGGCAATGATGGGGAT +
Preference number: 4 (lower is better)
Translates to: TGPWVSCSMQQTAELIFLLRNGI*FGNDGD
Trigger: ATCCCCATCATTGCCAAAGCAGATGCCATTTCGAAG...AAGAAAAATTAACTCTGCTGTTTGCTGCATGCTGCATGAGACCCAGGGTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp AGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCCTCACCTTATTGGGACAGGTTCCATTGATCTCTaGCACCGACTCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: SLQSGIYYSCYWPHLIGTGSIDL*HRLIIC
Trigger: ACAGATGATGAGTCGGTGGCAGAGATCAATGGAACC...TGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTTTCAACCTGCACAGTaGCCCAAGGATACTGCCGCG +
Preference number: 4 (lower is better)
Translates to: LICTQMQMRAPPVCNANNFQPAQ*PKDTAA
Trigger: CGCGGCAGTATCCTTGGGGCACTGTGCAGGTTGAAA...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CCCTGGGTCTCATGCAGCATGCAGCAAACAGCAGAGTTAATTTTTCTTCTCTTTTTCTTCTCGTCCTGGTaGAGTTTCTTCAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: PWVSCSMQQTAELIFLLFFFSSW*SFFRRS
Trigger: TGACCGTCTGAAGAAACTGCACCAGGACGAGAAGAA...AAAGAGAAGAAAAATTAACTCTGCTGTTTGCTGCATGCTGCATGAGACCCAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR GCA 90 bp GTTTATTCTCCCTTTTGCATCTGTGGGATACCCAGAGTTAGAGAGAGGGGAAACGAGGCAGGAGCAAGTTaGGGAACTCAAAAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VYSPFCICGIPRVRERGNEAGAS*GTQKEE
Trigger: TTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTC...GTTTCCCCTCTCTCTAACTCTGGGTATCCCACAGATGCAAAAGGGAGAATAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTCATCACCTTCATACTTaGTCTGGTCACTCACCAATC +
Preference number: 4 (lower is better)
Translates to: WLPVGCLSVNFWESSSEAHHLHT*SGHSPI
Trigger: GATTGGTGAGTGACCAGAGCAAGTATGAAGGTGATG...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGCAAGAAACTGGCTTGTaGTTTGGCAGCATCACCTTC +
Preference number: 4 (lower is better)
Translates to: CTQMQMRAPPVCNANNYRQETGL*FGSITF
Trigger: GAAGGTGATGCTGCCAAAGCACAAGCCAGTTTCTTG...CCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATGACTGGGATGCAGGATaGATCTGCGAGCCACATGAC +
Preference number: 4 (lower is better)
Translates to: LICTQMQMRAPPVCNANNDWDAG*ICEPHD
Trigger: GTCATGTGGCTCGCAGATGCATCCTGCATCCCAGTC...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCCTCACGAGAGGGGAAACGTCTaGTATTTTCTTCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: AQFSSLQSGIYYSCYWPHERGNV*YFLQQL
Trigger: CAACTGCTGAAGAAAATAGCAGACGTTTCCCCTCTC...GTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TCAGAAATGTTTAACAGTGGCTGTAGACAGTCAACCCATCGAACCAGAGAAATGTTGAAGCAGAAGCCCTaGCTGACGGACTTATTCACC +
Preference number: 4 (lower is better)
Translates to: SEMFNSGCRQSTHRTREMLKQKP*LTDLFT
Trigger: GGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAA...CATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp CGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATTTCTTCTTATCCTGTGTGTGGGTGGCTaGCTCCCCTTCGAATTTGGT +
Preference number: 4 (lower is better)
Translates to: RLSLLESIHFIIQGFLLILCVGG*LPFEFG
Trigger: ACCAAATTCGAAGGGGAGCCAGCCACCCACACACAG...GATAAGAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CCA 90 bp TTGACAGCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGTTCACAAAGTCGCAGTaGGCCTCGTTTTCAACCTGC +
Preference number: 4 (lower is better)
Translates to: LTAQFSSLQSGIYYSCYWFTKSQ*ASFSTC
Trigger: GCAGGTTGAAAACGAGGCCCACTGCGACTTTGTGAA...CCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTTTCTCTTTGACTCGCTaGACGAACATCTGTCTCATC +
Preference number: 4 (lower is better)
Translates to: WLPVGCLSVNFWESSSEAFSLTR*TNICLI
Trigger: GATGAGACAGATGTTCGTCCAGCGAGTCAAAGAGAA...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TGCTCTGGTCACTCACCAATCAATAGAGCACCAAACCTACACAGCAAACCTATATTCTTCTTCTCGTCCTaGTGCAGTTTCTTCAGACGG +
Preference number: 4 (lower is better)
Translates to: CSGHSPINRAPNLHSKPIFFFSS*CSFFRR
Trigger: CCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAA...TATAGGTTTGCTGTGTAGGTTTGGTGCTCTATTGATTGGTGAGTGACCAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TGGTGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAAACTGGCTTGTGCTTTaGCAGCATCACCTTCATACT +
Preference number: 4 (lower is better)
Translates to: WWLPVGCLSVNFWESSSENWLVL*QHHLHT
Trigger: AGTATGAAGGTGATGCTGCCAAAGCACAAGCCAGTT...TTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATGCCTCGAAACAGAAGTaGGACCTCGGTCAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LICTQMQMRAPPVCNANNASKQK*DLGQVP
Trigger: AGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGC...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTAACAGCAACCAGAACTaGAACAGGGGAGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLNSNQN*NRGAGG
Trigger: CCCACCAGCTCCCCTGTTCCAGTTCTGGTTGCTGTT...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAACTGGCCTCACCTTATTaGGACAGTATGGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKLASPY*DSMEPF
Trigger: GAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAG...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAAGCCTTGCAGCATCACTaGGTCATTGGGTTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKALQHH*VIGLRS
Trigger: GCTCCTTAACCCAATGACCCAGTGATGCTGCAAGGC...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GGGATTTATTATTCCTGCTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTAAAGCCACTCCAGTCTaGGAAAATAAAAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: GIYYSCYWPHLIGTVWSPKATPV*ENKSTD
Trigger: GTCTGTGCTTTTATTTTCCCAGACTGGAGTGGCTTT...AGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGAAAGCCACTCCAGTCTaGGAAAATAAAAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: SSCSGEYYSVHSHGLLQRKATPV*ENKSTD
Trigger: GTCTGTGCTTTTATTTTCCCAGACTGGAGTGGCTTT...CCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AATGGAGTAATTTTGCCCTCACTAAGCTTAAACCCCCTCCCTTCTCTACCTAAGACTGGTCTCGGAAGGTaGAATGGAGTAATTTTGCCC +
Preference number: 4 (lower is better)
Translates to: NGVILPSLSLNPLPSLPKTGLGR*NGVILP
Trigger: GGGCAAAATTACTCCATTCCACCTTCCGAGACCAGT...CTTAGGTAGAGAAGGGAGGGGGTTTAAGCTTAGTGAGGGCAAAATTACTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR TCA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAAAGCTGTCCTCTTTGTTaGTCTGGTCCCCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKSCPLC*SGPQSQ
Trigger: TTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCT...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp CTCTCTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCCCGTCTTTCTTTGCTTaGAAGCATTCACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: LSQNPNWSRKVEWSNFALPSFFA*KHSLHH
Trigger: ATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGG...GAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR TCA 90 bp CATTCACCAAATGAACTAGAAGACTCATCAGAGCAAACCCCCAAACACTTGATTGGGAGTCAGGAGGCATaGAAATTAGTCTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: HSPNELEDSSEQTPKHLIGSQEA*KLVWLL
Trigger: CAGAAGCCAGACTAATTTTCATGCCTCCTGACTCCC...AATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTCTAGTTCATTTGGTGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp AGATCATTGCCAGGTCAACTCCATCTCTCACACTGTCACTGGCCAAACACCAAAACTAGTCAGTTACTCTaGACATCAAAAGACCTCGTA +
Preference number: 4 (lower is better)
Translates to: RSLPGQLHLSHCHWPNTKTSQLL*TSKDLV
Trigger: TACGAGGTCTTTTGATGTTCAGAGTAACTGACTAGT...TTTGGTGTTTGGCCAGTGACAGTGTGAGAGATGGAGTTGACCTGGCAATGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CGTCCATTTTCCAGCTCTGATGGTTCTTTTCCTGCCTTGTTAGTTAGGACAAGACTTCGAAATGGCATCTaGTTTGGCAATGATGGGGAT +
Preference number: 4 (lower is better)
Translates to: RPFSSSDGSFPALLVRTRLRNGI*FGNDGD
Trigger: ATCCCCATCATTGCCAAAGCAGATGCCATTTCGAAG...TCTTGTCCTAACTAACAAGGCAGGAAAAGAACCATCAGAGCTGGAAAATGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp GAGGCAGGAGCAAGTTGCGGAACTCAAAAAGAAGAAGTGAGCTTGAAGTACATGCCCTCATCATCTTGTTaGCTATCTTCAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EAGASCGTQKEEVSLKYMPSSSC*LSSVLL
Trigger: CAGAAGAACTGAAGATAGGCAACAAGATGATGAGGG...CATGTACTTCAAGCTCACTTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp AGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGAAGCCCTCATCATCTTGTTaGCTATCTTCAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SCSGEYYSVHSHGLLQRKPSSSC*LSSVLL
Trigger: CAGAAGAACTGAAGATAGGCAACAAGATGATGAGGG...CTTCCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp ACACTTCCATTTAAAATACCATGTGAGTCAGGAAGAGAGCTTCTTGCCTGGACATTCTTCTCGTCCTGGTaGAGTTTCTTCAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: TLPFKIPCESGRELLAWTFFSSW*SFFRRS
Trigger: TGACCGTCTGAAGAAACTGCACCAGGACGAGAAGAA...TGTCCAGGCAAGAAGCTCTCTTCCTGACTCACATGGTATTTTAAATGGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp CGTCCATTTTCCAGCTCTGATGGTTCTTTTCCTGCCTTGTTAGTTAGGACAAGAGCCGCCGTCTTTCTTTaGTTGAAAGCATTCACTTCA +
Preference number: 4 (lower is better)
Translates to: RPFSSSDGSFPALLVRTRAAVFL*LKAFTS
Trigger: TGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGC...TCTTGTCCTAACTAACAAGGCAGGAAAAGAACCATCAGAGCTGGAAAATGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp TCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGCTTGGTGTAAATAAATaGGTTGCCGATTTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SSCSGEYYSVHSHGLLQRLGVNK*VADFEH
Trigger: GTGCTCAAAATCGGCAACGCATTTATTTACACCAAG...CCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp ATTCAGTACACAGCCATGGATTACTGCAAAGGAAGGGCAGAGAGACGGCATGTTCTTGGTGTAAATAAATaGGTTGCCGATTTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: IQYTAMDYCKGRAERRHVLGVNK*VADFEH
Trigger: GTGCTCAAAATCGGCAACGCATTTATTTACACCAAG...AACATGCCGTCTCTCTGCCCTTCCTTTGCAGTAATCCATGGCTGTGTACTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TCAGAAATGTTTAACAGTGGCTGTAGACAGTCAACCCATCGAACCAGAGAAATGTCCTCTTTGTTGATCTaGTCCCCAAAGCCAACTGTG +
Preference number: 4 (lower is better)
Translates to: SEMFNSGCRQSTHRTREMSSLLI*SPKPTV
Trigger: CACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGA...CATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp ATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACTTCACAAAGTCGCAGTaGGCCTCGTTTTCAACCTGC +
Preference number: 4 (lower is better)
Translates to: ICTQMQMRAPPVCNANNYFTKSQ*ASFSTC
Trigger: GCAGGTTGAAAACGAGGCCCACTGCGACTTTGTGAA...GTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGTTCTCTTTGACTCGCTaGACGAACATCTGTCTCATC +
Preference number: 4 (lower is better)
Translates to: CTQMQMRAPPVCNANNYRFSLTR*TNICLI
Trigger: GATGAGACAGATGTTCGTCCAGCGAGTCAAAGAGAA...CCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTATTTTCCCAAGAAACTaGCTTGTGCTTTGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: WLPVGCLSVNFWESSSEAIFPRN*LVLWQH
Trigger: ATGCTGCCAAAGCACAAGCCAGTTTCTTGGGAAAAT...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TGGTGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAATTAAGCGTGAATTTCTaGGAAAGCAGCTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: WWLPVGCLSVNFWESSSELSVNF*ESSSEA
Trigger: AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA...TTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TTGACAGCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGAAACCCTCTAAGAAATaGCTGTGGCTCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LTAQFSSLQSGIYYSCYWKPSKK*LWLLRM
Trigger: CATCCTCAGGAGCCACAGCCATTTCTTAGAGGGTTT...CCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTAAAACTGGAAAGGGCTaGACTCAAAGGTTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: WLPVGCLSVNFWESSSEAKTGKG*TQRLEG
Trigger: TCCTTCTAACCTTTGAGTCCAGCCCTTTCCAGTTTT...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CTCAAACAAAACCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTCCAGTCACTTACACTTaGGTGAGTGGTCCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: LKQNLVNRTVLSYPQLRCPVTYT*VSGPVV
Trigger: AACTACAGGACCACTCACCCAAGTGTAAGTGACTGG...ACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTGTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
3UTR CAA 72 bp TGTAACTTGAATTTTCCCAAGAAACTGGCTTGTGCTTaGGCAGCATCACCTTCATACTTGCTCTGGTCACTC +
Preference number: 4 (lower is better)
Translates to: CNLNFPKKLACA*AASPSYLLWSL
Trigger: GAGTGACCAGAGCAAGTATGAAGGTGATGCTGCCAAAGCACAAGCCAGTTTCTTGGGAAAATTCAAGTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp AACATCAAAAGACCTCGTATCCAGGAATGTAACGTATATAAACAGATTGAATCCAGCAGAAGCCCTGGCTaGCGGACTTATTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: NIKRPRIQECNVYKQIESSRSPG*RTYSPA
Trigger: AGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCT...GGATTCAATCTGTTTATATACGTTACATTCCTGGATACGAGGTCTTTTGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp TGGTGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAATACTCCACTGTAACTTaGATTTTCCCAAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: WWLPVGCLSVNFWESSSEYSTVT*IFPRNW
Trigger: CCAGTTTCTTGGGAAAATTCAAGTTACAGTGGAGTA...TTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp AAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGAAAATTCTCCTCCTTAGTTTCTaGAGGTCTCTCCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: KQIESLCETDWESGGMKILLLSF*RSLQGC
Trigger: ACAGCCTTGGAGAGACCTTCAGAAACTAAGGAGGAG...AATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp AAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGAAAATTGGGAGTCAGGAGGCATaGAAATTAGTCTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: KQIESLCETDWESGGMKIGSQEA*KLVWLL
Trigger: CAGAAGCCAGACTAATTTTCATGCCTCCTGACTCCC...AATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp TCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGATGACATTCACCAAATaGACTAGAAGACTCATCAGA +
Preference number: 4 (lower is better)
Translates to: SSCSGEYYSVHSHGLLQRMTFTK*TRRLIR
Trigger: TCTGATGAGTCTTCTAGTTCATTTGGTGAATGTCAT...CCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp CTCAAACAAAACCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTGACTGGTCACACCTTTaGGCAAAAAGAACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LKQNLVNRTVLSYPQLRCDWSHL*AKRTKE
Trigger: CTCCTTTGTTCTTTTTGCTCAAAGGTGTGACCAGTC...ACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTGTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTCGGTCAAACTTCTCGTaGAGCTCTTTCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLRSNFS*SSFSAS
Trigger: AGAGGCAGAGAAAGAGCTGCACGAGAAGTTTGACCG...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GAAATACCTCACAAGAAGAATTCGGTAAGGCTATCATTCAAGACTCTAGGCTGGGCCGCCGTCTTTCTTTaGTTGAAAGCATTCACTTCA +
Preference number: 4 (lower is better)
Translates to: EIPHKKNSVRLSFKTLGWAAVFL*LKAFTS
Trigger: TGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGC...CCAGCCTAGAGTCTTGAATGATAGCCTTACCGAATTCTTCTTGTGAGGTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TTGACAGCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGGAGGCAGGAGCAAGTTaGGGAACTCAAAAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LTAQFSSLQSGIYYSCYWEAGAS*GTQKEE
Trigger: TTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTC...CCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGCTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp GAAATACCTCACAAGAAGAATTCGGTAAGGCTATCATTCAAGACTCTAGGCTGGTTAGCCACAGATCATTaGCAGGTCAACTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: EIPHKKNSVRLSFKTLGWLATDH*QVNSIS
Trigger: AGAGATGGAGTTGACCTGGCAATGATCTGTGGCTAA...CCAGCCTAGAGTCTTGAATGATAGCCTTACCGAATTCTTCTTGTGAGGTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTTTGAAGCAGAAGCCCTaGCTGACGGACTTATTCACC +
Preference number: 4 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLLKQKP*LTDLFT
Trigger: GGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAA...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTTGAAGCAGAAGCCCTaGCTGACGGACTTATTCACC +
Preference number: 4 (lower is better)
Translates to: LICTQMQMRAPPVCNANNLKQKP*LTDLFT
Trigger: GGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAA...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp ACACTTCCATTTAAAATACCATGTGAGTCAGGAAGAGAGCTTCTTGCCTGGACATTCTCTTTGACTCGCTaGACGAACATCTGTCTCATC +
Preference number: 4 (lower is better)
Translates to: TLPFKIPCESGRELLAWTFSLTR*TNICLI
Trigger: GATGAGACAGATGTTCGTCCAGCGAGTCAAAGAGAA...TGTCCAGGCAAGAAGCTCTCTTCCTGACTCACATGGTATTTTAAATGGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAAGGTTTCTATAAACCTTaGCAGGAAGAGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKGFYKP*QEERRG
Trigger: CCCTCTCCTCTCTTCCTGCCAAGGTTTATAGAAACC...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AACATCAAAAGACCTCGTATCCAGGAATGTAACGTATATAAACAGATTGAATCCGAACAGGGGAGCTGGTaGGAAAGAGTAGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: NIKRPRIQECNVYKQIESEQGSW*ERVADG
Trigger: CCCATCTGCTACTCTTTCCCACCAGCTCCCCTGTTC...GGATTCAATCTGTTTATATACGTTACATTCCTGGATACGAGGTCTTTTGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GAAGACTCATCAGAGCAAACCCCCAAACACTTGATTCTTTTGACAGCTCAGTTTCTTATTGGGACAGTATaGAGCCCTTCCGGAAATTAC +
Preference number: 4 (lower is better)
Translates to: EDSSEQTPKHLILLTAQFLIGTV*SPSGNY
Trigger: GTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAG...AAACTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATGGTTCCATTGATCTCTaGCACCGACTCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: LICTQMQMRAPPVCNANNGSIDL*HRLIIC
Trigger: ACAGATGATGAGTCGGTGGCAGAGATCAATGGAACC...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp AAATGTTTAACAGTGGCTGTAGACAGTCAACCCATCGAACCAGAGAAATGTTTAGGTTCCATTGATCTCTaGCACCGACTCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: KCLTVAVDSQPIEPEKCLGSIDL*HRLIIC
Trigger: ACAGATGATGAGTCGGTGGCAGAGATCAATGGAACC...TAAACATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp TCAGAAATGTTTAACAGTGGCTGTAGACAGTCAACCCATCGAACCAGAGAAATGCCCTCATCATCTTGTTaGCTATCTTCAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SEMFNSGCRQSTHRTREMPSSSC*LSSVLL
Trigger: CAGAAGAACTGAAGATAGGCAACAAGATGATGAGGG...CATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp ATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACGCCGCCGTCTTTCTTTaGTTGAAAGCATTCACTTCA +
Preference number: 4 (lower is better)
Translates to: ICTQMQMRAPPVCNANNYAAVFL*LKAFTS
Trigger: TGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGC...GTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAAGCCGCCGTCTTTCTTTaGTTGAAAGCATTCACTTCA +
Preference number: 4 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKAAVFL*LKAFTS
Trigger: TGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGC...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp AAATGTTTAACAGTGGCTGTAGACAGTCAACCCATCGAACCAGAGAAATGTTTATGGTGTATGTGTGTGTaGTTGCAGTTTGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: KCLTVAVDSQPIEPEKCLWCMCV*LQFEGR
Trigger: TCTCCCCTCAAACTGCAAGCACACACACATACACCA...TAAACATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CCA 90 bp AAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGAAAATTCTTGAAAGTAGGGTATaGAGAGGGGGCGGATTTAAC +
Preference number: 4 (lower is better)
Translates to: KQIESLCETDWESGGMKILESRV*RGGGFN
Trigger: GTTAAATCCGCCCCCTCTCCATACCCTACTTTCAAG...AATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343984.5
ENST00000354416.7
CDS-3UTR CCA 90 bp GTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGAACTGGCTTGTGCTTTaGCAGCATCACCTTCATACT +
Preference number: 4 (lower is better)
Translates to: VYKQIESLCETDWESGGMNWLVL*QHHLHT
Trigger: AGTATGAAGGTGATGCTGCCAAAGCACAAGCCAGTT...CATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp GAAGACTCATCAGAGCAAACCCCCAAACACTTGATTCTTTTGACAGCTCAGTTTCTTTGTGAAACTGATTaGGAGTCAGGAGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: EDSSEQTPKHLILLTAQFLCETD*ESGGMK
Trigger: TTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAG...AAACTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGAAGTTCCAGCCTACAAAGTaGGATTTATTATTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: SCSGEYYSVHSHGLLQRKFQPTK*DLLFLL
Trigger: TAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAA...CTTCCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AACATCAAAAGACCTCGTATCCAGGAATGTAACGTATATAAACAGATTGAATCCGCCTTGCAGCATCACTaGGTCATTGGGTTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NIKRPRIQECNVYKQIESALQHH*VIGLRS
Trigger: GCTCCTTAACCCAATGACCCAGTGATGCTGCAAGGC...GGATTCAATCTGTTTATATACGTTACATTCCTGGATACGAGGTCTTTTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGATTTATGTTCACTCATaGGTTCGATTTTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: SSCSGEYYSVHSHGLLQRIYVHS*VRFLFT
Trigger: GGTGAACAAAAATCGAACCCATGAGTGAACATAAAT...CCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATCTTCGAAATGGCATCTaGTTTGGCAATGATGGGGAT +
Preference number: 4 (lower is better)
Translates to: LICTQMQMRAPPVCNANNLRNGI*FGNDGD
Trigger: ATCCCCATCATTGCCAAAGCAGATGCCATTTCGAAG...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp AATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGCGGTCAAACTTCTCGTaGAGCTCTTTCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: NVTYINRLNPFVKLIGSQRSNFS*SSFSAS
Trigger: AGAGGCAGAGAAAGAGCTGCACGAGAAGTTTGACCG...CTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATGAGGCAGGAGCAAGTTaGGGAACTCAAAAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LICTQMQMRAPPVCNANNEAGAS*GTQKEE
Trigger: TTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTC...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAAGTTTATTCTCCCTTTTaGATCTGTGGGATACCCAGA +
Preference number: 4 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKVYSPF*ICGIPR
Trigger: TCTGGGTATCCCACAGATGCAAAAGGGAGAATAAAC...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTTTAGCCACAGATCATTaGCAGGTCAACTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLLATDH*QVNSIS
Trigger: AGAGATGGAGTTGACCTGGCAATGATCTGTGGCTAA...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGTTCACAAAGTCGCAGTaGGCCTCGTTTTCAACCTGC +
Preference number: 4 (lower is better)
Translates to: NVTYINRLNPFVKLIGSQFTKSQ*ASFSTC
Trigger: GCAGGTTGAAAACGAGGCCCACTGCGACTTTGTGAA...CTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAACTTTGTGAAACTGATTaGGAGTCAGGAGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKLCETD*ESGGMK
Trigger: TTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAG...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CCTTCTCAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTCGAGTGAATGAAAACTaGAAAGGGCTGGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: PSQYFKKAWKFGITLFDCRVNEN*KGLDSK
Trigger: CTTTGAGTCCAGCCCTTTCCAGTTTTCATTCACTCG...ACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTGAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CATTCACCAAATGAACTAGAAGACTCATCAGAGCAAACCCCCAAACACTTGATTCTCATCTCTTCTTATTaGGGGATGCATGCAAAATGC +
Preference number: 4 (lower is better)
Translates to: HSPNELEDSSEQTPKHLILISSY*GMHAKC
Trigger: GCATTTTGCATGCATCCCCCAATAAGAAGAGATGAG...AATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTCTAGTTCATTTGGTGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGAAGATTTATGTTCACTCATaGGTTCGATTTTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: SCSGEYYSVHSHGLLQRKIYVHS*VRFLFT
Trigger: GGTGAACAAAAATCGAACCCATGAGTGAACATAAAT...CTTCCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAACCGTCTTTCTTTGCTTaGAAGCATTCACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKPSFFA*KHSLHH
Trigger: ATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGG...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp ACACTTCCATTTAAAATACCATGTGAGTCAGGAAGAGAGCTTCTTGCCTGGACATGCAAGTTAAACCAATaGATTCAAGGCAGATTTACC +
Preference number: 4 (lower is better)
Translates to: TLPFKIPCESGRELLAWTCKLNQ*IQGRFT
Trigger: GGTAAATCTGCCTTGAATTCATTGGTTTAACTTGCA...TGTCCAGGCAAGAAGCTCTCTTCCTGACTCACATGGTATTTTAAATGGAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR GCA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTCCCTCATCATCTTGTTaGCTATCTTCAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLPSSSC*LSSVLL
Trigger: CAGAAGAACTGAAGATAGGCAACAAGATGATGAGGG...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp AATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGTTCTTCTCGTCCTGGTaGAGTTTCTTCAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: NVTYINRLNPFVKLIGSQFFSSW*SFFRRS
Trigger: TGACCGTCTGAAGAAACTGCACCAGGACGAGAAGAA...CTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGAAAATTATTTTCCCAAGAAACTaGCTTGTGCTTTGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KQIESLCETDWESGGMKIIFPRN*LVLWQH
Trigger: ATGCTGCCAAAGCACAAGCCAGTTTCTTGGGAAAAT...AATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATCTTTGTGAAACTGATTaGGAGTCAGGAGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: LICTQMQMRAPPVCNANNLCETD*ESGGMK
Trigger: TTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAG...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATCTCATCTCTTCTTATTaGGGGATGCATGCAAAATGC +
Preference number: 4 (lower is better)
Translates to: LICTQMQMRAPPVCNANNLISSY*GMHAKC
Trigger: GCATTTTGCATGCATCCCCCAATAAGAAGAGATGAG...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp CTTTCTCTTGCATATTCAGAAATGTTTAACAGTGGCTGTAGACAGTCAACCCATTTACACTTGGGTGAGTaGTCCTGTAGTTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LSLAYSEMFNSGCRQSTHLHLGE*SCSCFS
Trigger: AGAGAAACAACTACAGGACCACTCACCCAAGTGTAA...ATGGGTTGACTGTCTACAGCCACTGTTAAACATTTCTGAATATGCAAGAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR TCA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTCCGTCTTTCTTTGCTTaGAAGCATTCACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLPSFFA*KHSLHH
Trigger: ATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGG...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp CTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATTTCTTCTTATCCTCCCGTCTTTCTTTGCTTaGAAGCATTCACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: LSLLESIHFIIQGFLLILPSFFA*KHSLHH
Trigger: ATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGG...GAGGATAAGAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR TCA 90 bp GTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGAAAATCTGTCTACAGTaGGAAAAGCTACCCAATGAA +
Preference number: 4 (lower is better)
Translates to: VYKQIESLCETDWESGGMKICLQ*EKLPNE
Trigger: TTCATTGGGTAGCTTTTCTCACTGTAGACAGATTTT...CATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATGGGATTTATTATTCCTaGTACTGGCCTCACCTTATT +
Preference number: 4 (lower is better)
Translates to: LICTQMQMRAPPVCNANNGIYYS*YWPHLI
Trigger: AATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCC...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR TCA 90 bp CCTTCTCAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTAAAATCTGTCTACAGTaGGAAAAGCTACCCAATGAA +
Preference number: 4 (lower is better)
Translates to: PSQYFKKAWKFGITLFDCKICLQ*EKLPNE
Trigger: TTCATTGGGTAGCTTTTCTCACTGTAGACAGATTTT...ACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTGAGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAATGTCAACAAGAAAAGTaGGTGCATATGTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKCQQEK*VHMFAF
Trigger: AAAAGCAAACATATGCACGCACTTTTCTTGTTGACA...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGTGGTGGTTACCGGTTaGTTGTTTAAGCGTGAATTT +
Preference number: 4 (lower is better)
Translates to: NVTYINRLNPFVKLIGSQVVVTG*LFKREF
Trigger: AAATTCACGCTTAAACAACCAACCGGTAACCACCAC...CTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CCA 90 bp AATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGAGCAGTTGTGTTTTATaGGAAGGGCTTGGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: NVTYINRLNPFVKLIGSQSSCVL*EGLGVN
Trigger: ATTTACACCAAGCCCTTCCCATAAAACACAACTGCT...CTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR GCA 90 bp AATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGTGTCAACAAGAAAAGTaGGTGCATATGTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NVTYINRLNPFVKLIGSQCQQEK*VHMFAF
Trigger: AAAAGCAAACATATGCACGCACTTTTCTTGTTGACA...CTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS GCA 90 bp GACAGTTCGGCAACCTTCACCCACCTGGCGAGCTATATCGGTCGCTaGCATCGCTCCTGCGTCCGCCAGGGCTGCCACGGGTGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: DSSATFTHLASYIGR*HRSCVRQGCHGCRR
Trigger: GCGGCGGCACCCGTGGCAGCCCTGGCGGACGCAGGAGCGATGGCAGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTGCCGAACTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343984.5
ENST00000354228.8
ENST00000354416.7
ENST00000360156.11
ENST00000394610.7
ENST00000460411.5
ENST00000489216.5
CDS GCA 90 bp GCGAGCTATATCGGTCGCTGCCATCGCTCCTGCGTCCGCCAGGGCTaGCACGGGTGCCGCCGCAACGGGAGCTACTGCACAGGAAACAGA +
Preference number: 5 (lower is better)
Translates to: ASYIGRCHRSCVRQG*HGCRRNGSYCTGNR
Trigger: TCTGTTTCCTGTGCAGTAGCTCCCGTTGCGGCGGCACCCGTGGCAGCCCTGGCGGACGCAGGAGCGATGGCAGCGACCGATATAGCTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343984.5
ENST00000354228.8
ENST00000354416.7
ENST00000360156.11
ENST00000460411.5
ENST00000489216.5
CDS GCA 90 bp GAGCAAGCTGGACAGATGGGCTGGGCCTCTGGGACCACACCCCTCTaGTACTCTCAACTCCCCAAGCTCAGGGAATCCAAAGGTGCCACA +
Preference number: 5 (lower is better)
Translates to: EQAGQMGWASGTTPL*YSQLPKLRESKGAT
Trigger: TGTGGCACCTTTGGATTCCCTGAGCTTGGGGAGTTGAGAGTAGCAGAGGGGTGTGGTCCCAGAGGCCCAGCCCATCTGTCCAGCTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481072.1
CDS-3UTR CAA 90 bp GGCCCAGCTCTGTTGCGCAGGAAAAGGGTGTCTACAGGAAGCCCAAACAGGACCCGGCATGCCTTCGTTTaGCCAGCCCTCACCCAATCC +
Preference number: 5 (lower is better)
Translates to: GPALLRRKRVSTGSPNRTRHAFV*PALTQS
Trigger: GGATTGGGTGAGGGCTGGCAAAACGAAGGCATGCCG...GGTCCTGTTTGGGCTTCCTGTAGACACCCTTTTCCTGCGCAACAGAGCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394610.7
CDS CCA 90 bp ACCTTGAGTTTGCAGGGCTTTCCTGAGCAAGCTGGACAGATGGGCTaGGCCTCTGGGACCACACCCCTCTGCTACTCTCAACTCCCCAAG +
Preference number: 5 (lower is better)
Translates to: TLSLQGFPEQAGQMG*ASGTTPLCYSQLPK
Trigger: CTTGGGGAGTTGAGAGTAGCAGAGGGGTGTGGTCCCAGAGGCCCAGCCCATCTGTCCAGCTTGCTCAGGAAAGCCCTGCAAACTCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481072.1
CDS-3UTR CAA 90 bp GTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCGGAGGCCCAGCTCTGTaGCGCAGGAAAAGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: VWLLPRNRSGTSVKSLPFGGPAL*RRKRVS
Trigger: AGACACCCTTTTCCTGCGCAACAGAGCTGGGCCTCC...GAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GGGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGTCCCAAGAAACTGGCTaGTGCTTTGGCAGCATCACC +
Preference number: 5 (lower is better)
Translates to: GSPRAPVTHSLLDPVPALSQETG*CFGSIT
Trigger: GGTGATGCTGCCAAAGCACAAGCCAGTTTCTTGGGA...CAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GGCCCAGCTCTGTTGCGCAGGAAAAGGGTGTCTACAGGAAGCCCAAACAGGACCATGACTGTTGGCTTCTaGACCAGCGGCCAGACATCA +
Preference number: 5 (lower is better)
Translates to: GPALLRRKRVSTGSPNRTMTVGF*TSGQTS
Trigger: TGATGTCTGGCCGCTGGTCAAGAAGCCAACAGTCAT...GGTCCTGTTTGGGCTTCCTGTAGACACCCTTTTCCTGCGCAACAGAGCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394610.7
CDS-3UTR CAA 90 bp GGGTCACCTAGGGCACCTGTTACACACAGTCTCCTGGACCCCGTTCCAGCCTTGGTTAGCCACAGATCATaGCCAGGTCAACTCCATCTC +
Preference number: 5 (lower is better)
Translates to: GSPRAPVTHSLLDPVPALVSHRS*PGQLHL
Trigger: GAGATGGAGTTGACCTGGCAATGATCTGTGGCTAAC...CAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CAGCTGAGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTGGCTCCCCTTCGAATTaGGTGTTGAACAGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: QLRCPAPVTYTWVSGPVVGSPSN*VLNRVS
Trigger: GGACACCCTGTTCAACACCAAATTCGAAGGGGAGCC...AACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp CATCACTGGGTCATTGGGTTAAGGAGCTGGCCCGGCATGCCTTCGTTTTGCCAGTCCCAAGAAACTGGCTaGTGCTTTGGCAGCATCACC +
Preference number: 5 (lower is better)
Translates to: HHWVIGLRSWPGMPSFCQSQETG*CFGSIT
Trigger: GGTGATGCTGCCAAAGCACAAGCCAGTTTCTTGGGA...CTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCTGGACTGGCCTCACCTTATaGGGACAGTATGGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: ASASKQKWDLGQVPSLLWTGLTL*GQYGAL
Trigger: AAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGT...CCAGAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GGAGGGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATTCTACCGCCCACCCCTaGAAAGTAGGGTATGGAGAG +
Preference number: 5 (lower is better)
Translates to: GGLSTSQRFPKPLSDGTHSTAHP*KVGYGE
Trigger: CTCTCCATACCCTACTTTCAAGGGGTGGGCGGTAGA...ATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354416.7
CDS-3UTR CAA 90 bp GGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGACCCATGATACGGCATGCCTTCGTTTaGCCAGCCCTCACCCAATCC +
Preference number: 5 (lower is better)
Translates to: GSLLHRGSQSHYQMGPMIRHAFV*PALTQS
Trigger: GGATTGGGTGAGGGCTGGCAAAACGAAGGCATGCCG...TATCATGGGTCCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGTCTACCGCCCACCCCTaGAAAGTAGGGTATGGAGAG +
Preference number: 5 (lower is better)
Translates to: QMQMRAPPVCNANNYRAASTAHP*KVGYGE
Trigger: CTCTCCATACCCTACTTTCAAGGGGTGGGCGGTAGA...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343984.5
ENST00000354416.7
CDS-3UTR CAA 90 bp GGACTGGAGCAGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCTCTACCGCCCACCCCTaGAAAGTAGGGTATGGAGAG +
Preference number: 5 (lower is better)
Translates to: GLEQLSRRLSLLESIHFISTAHP*KVGYGE
Trigger: CTCTCCATACCCTACTTTCAAGGGGTGGGCGGTAGA...GATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CAA 90 bp GACAGCTGTGCTGATCGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGCCTTCGAATTTGGTGTaGAACAGGGTGTCCATGAGG +
Preference number: 5 (lower is better)
Translates to: DSCADRWLPSHGGCKYLRPSNLV*NRVSMR
Trigger: CCTCATGGACACCCTGTTCAACACCAAATTCGAAGG...CCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCACAGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGGGCTCCCCTTCGAATTaGGTGTTGAACAGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: QMQMRAPPVCNANNYRAAGSPSN*VLNRVS
Trigger: GGACACCCTGTTCAACACCAAATTCGAAGGGGAGCC...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGTCCCAAGAAACTGGCTaGTGCTTTGGCAGCATCACC +
Preference number: 5 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKSQETG*CFGSIT
Trigger: GGTGATGCTGCCAAAGCACAAGCCAGTTTCTTGGGA...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GTGCTGATCGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGGAAACTAGCGTTCATGGTTCCATaGATCTCTGCCACCGACTCA +
Preference number: 5 (lower is better)
Translates to: VLIGGYPAMVVANTSGKLAFMVP*ISATDS
Trigger: TGAGTCGGTGGCAGAGATCAATGGAACCATGAACGC...TAGTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CAGAGAGACGGCATGTTAGCCACAGATCATTGCCAGGTCAACTCCATCTCTCACCCTTCGAATTTGGTGTaGAACAGGGTGTCCATGAGG +
Preference number: 5 (lower is better)
Translates to: QRDGMLATDHCQVNSISHPSNLV*NRVSMR
Trigger: CCTCATGGACACCCTGTTCAACACCAAATTCGAAGG...GTGAGAGATGGAGTTGACCTGGCAATGATCTGTGGCTAACATGCCGTCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp ATTCAGTACACAGCCATGGATTACAGGACCCTGGGTCTCATGCAGCATGCAGCACGCGCCCTCATCATCTaGTTGCCTATCTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: IQYTAMDYRTLGLMQHAARALII*LPIFSS
Trigger: AGAACTGAAGATAGGCAACAAGATGATGAGGGCGCG...TGCTGCATGCTGCATGAGACCCAGGGTCCTGTAATCCATGGCTGTGTACTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CAA 90 bp ATAATTACCGGGCGGCGGTGTGGGGAAGTGGTGGTTACCGGTTGGTTGTTTAAGAGCCGCCGTCTTTCTTaGCTTGAAAGCATTCACTTC +
Preference number: 5 (lower is better)
Translates to: IITGRRCGEVVVTGWLFKSRRLS*LESIHF
Trigger: GAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCT...CTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCCGCCCGGTAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GTTAAGGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATACCCAGCCATGGTGGTaGCAAATACCTCAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: VKGLFFSPAESHLFLLGDTQPWW*QIPQGN
Trigger: GTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGT...ATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCCTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp AAAGCTCGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACCAGGTAGGCCTCGAATaGTGCATCGATGAATTCCAC +
Preference number: 5 (lower is better)
Translates to: KARLKRLNGVQSSCSGEYQVGLE*CIDEFH
Trigger: GTGGAATTCATCGATGCACAATTCGAGGCCTACCTG...GTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCGAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CAA 90 bp CTCTCTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCGCGTTCATGGTTCCATaGATCTCTGCCACCGACTCA +
Preference number: 5 (lower is better)
Translates to: LSQNPNWSRKVEWSNFALAFMVP*ISATDS
Trigger: TGAGTCGGTGGCAGAGATCAATGGAACCATGAACGC...GAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp CTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATGCATGCAAAGCGTTCATGGTTCCATaGATCTCTGCCACCGACTCA +
Preference number: 5 (lower is better)
Translates to: LFFSPAESHLFLLGDACKAFMVP*ISATDS
Trigger: TGAGTCGGTGGCAGAGATCAATGGAACCATGAACGC...TTTGCATGCATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGGCGGCGAAACTGGCTTGTGCTTaGGCAGCATCACCTTCATAC +
Preference number: 5 (lower is better)
Translates to: QMQMRAPPVCNANNYRAAKLACA*AASPSY
Trigger: GTATGAAGGTGATGCTGCCAAAGCACAAGCCAGTTT...CGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GACAAGGGAGGGCTCTCTACTTCACAGAGGTTCCCAAAGCCACTATCAGATGGGGTGGTTACCGGTTGGTaGTTTAAGCGTGAATTTCTG +
Preference number: 5 (lower is better)
Translates to: DKGGLSTSQRFPKPLSDGVVTGW*FKREFL
Trigger: CAGAAATTCACGCTTAAACAACCAACCGGTAACCAC...CCCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCCCTCCCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACTATTCAATGACTGTTGGCTTCTaGACCAGCGGCCAGACATCA +
Preference number: 5 (lower is better)
Translates to: RLKRLNGVQSSCSGEYYSMTVGF*TSGQTS
Trigger: TGATGTCTGGCCGCTGGTCAAGAAGCCAACAGTCAT...TGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCTCTGGTATTTTCTTCAGCAGTaGTGTTTTATGGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: ASASKQKWDLGQVPSLLWYFLQQ*CFMGRA
Trigger: AGCCCTTCCCATAAAACACAACTGCTGAAGAAAATA...CCAGAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGGAAACTAACAGCAACGGTTTATTCTCCCTTTaGCATCTGTGGGATACCCAG +
Preference number: 5 (lower is better)
Translates to: RWLPSHGGCKYLRETNSNGLFSL*HLWDTQ
Trigger: CTGGGTATCCCACAGATGCAAAAGGGAGAATAAACC...GTTGCTGTTAGTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp AATGGAGTAATTTTGCCCTCACTAAGCTTAAACCCCCTCCCTTCTCTACCTAAGTCTACCGCCCACCCCTaGAAAGTAGGGTATGGAGAG +
Preference number: 5 (lower is better)
Translates to: NGVILPSLSLNPLPSLPKSTAHP*KVGYGE
Trigger: CTCTCCATACCCTACTTTCAAGGGGTGGGCGGTAGA...CTTAGGTAGAGAAGGGAGGGGGTTTAAGCTTAGTGAGGGCAAAATTACTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp CCCTGGGTCTCATGCAGCATGCAGCAAACAGCAGAGTTAATTTTTCTTCTCTTTGGCTCCCCTTCGAATTaGGTGTTGAACAGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: PWVSCSMQQTAELIFLLFGSPSN*VLNRVS
Trigger: GGACACCCTGTTCAACACCAAATTCGAAGGGGAGCC...AAAGAGAAGAAAAATTAACTCTGCTGTTTGCTGCATGCTGCATGAGACCCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CAA 90 bp GACACAGGGACACATGAACACTTGTTGAGTGGTGTGGTGTATGTGTGTGTGCTTCAGGTAGGCCTCGAATaGTGCATCGATGAATTCCAC +
Preference number: 5 (lower is better)
Translates to: DTGTHEHLLSGVVYVCVLQVGLE*CIDEFH
Trigger: GTGGAATTCATCGATGCACAATTCGAGGCCTACCTG...AAGCACACACACATACACCACACCACTCAACAAGTGTTCATGTGTCCCTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp CTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATTTGCGTTCATGGTTCCATaGATCTCTGCCACCGACTCA +
Preference number: 5 (lower is better)
Translates to: LSRRLSLLESIHFIIQGFAFMVP*ISATDS
Trigger: TGAGTCGGTGGCAGAGATCAATGGAACCATGAACGC...AAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CAA 90 bp GTCTGGCTTCTGCCTCGAAACAGAAGTGGGACCTCGGTCAAGTCCCTTCCCTTCGTGGGTCTAATACTTTaGAATTATTCAGAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: VWLLPRNRSGTSVKSLPFVGLIL*NYSELL
Trigger: GAGAAGCTCTGAATAATTCAAAAGTATTAGACCCAC...GAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGGGAGGCCCAGCTCTGTaGCGCAGGAAAAGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: VYKQIESLCETDWESGGMGGPAL*RRKRVS
Trigger: AGACACCCTTTTCCTGCGCAACAGAGCTGGGCCTCC...CATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GCTCAGTTTTCCAGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCCTCACACCCAGCCATGGTGGTaGCAAATACCTCAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: AQFSSLQSGIYYSCYWPHTQPWW*QIPQGN
Trigger: GTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGT...GTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAAAACTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GCTACTGGCCTCACCTTATTGGGACAGTATGGAGCCCTTCCGGAAATTACCCCCTCTCAACTCCTTAAATaGGAAAGAAAGTTAAGGGCC +
Preference number: 5 (lower is better)
Translates to: ATGLTLLGQYGALPEITPSQLLK*ERKLRA
Trigger: GGCCCTTAACTTTCTTTCCAATTTAAGGAGTTGAGA...GGGGGTAATTTCCGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CTCTCTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCGTGTGTGCTTGCAGTTaGAGGGGAGAGGAAATTGGT +
Preference number: 5 (lower is better)
Translates to: LSQNPNWSRKVEWSNFALVCACS*RGEEIG
Trigger: ACCAATTTCCTCTCCCCTCAAACTGCAAGCACACAC...GAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp GACACAGGGACACATGAACACTTGTTGAGTGGTGTGGTGTATGTGTGTGTGCTTTGTATGTGTGTGTGCTaGCAGTTTGAGGGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: DTGTHEHLLSGVVYVCVLCMCVC*QFEGRG
Trigger: TCCTCTCCCCTCAAACTGCAAGCACACACACATACA...AAGCACACACACATACACCACACCACTCAACAAGTGTTCATGTGTCCCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp AGGTGTCCTGCCCCAGTCACTTACACTTGGGTGAGTGGTCCTGTAGTTGTTTCTACACATGAACACTTGTaGAGTGGTGTGGTGTATGTG +
Preference number: 5 (lower is better)
Translates to: RCPAPVTYTWVSGPVVVSTHEHL*SGVVYV
Trigger: CACATACACCACACCACTCAACAAGTGTTCATGTGT...AGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTCCTTCGAATTTGGTGTaGAACAGGGTGTCCATGAGG +
Preference number: 5 (lower is better)
Translates to: WLPVGCLSVNFWESSSEAPSNLV*NRVSMR
Trigger: CCTCATGGACACCCTGTTCAACACCAAATTCGAAGG...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CAAAACCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTCCTGCCGAAATGGCATCTGCTTaGGCAATGATGGGGATGATG +
Preference number: 5 (lower is better)
Translates to: QNLVNRTVLSYPQLRCPAEMASA*AMMGMM
Trigger: CATCATCCCCATCATTGCCAAAGCAGATGCCATTTC...GGCAGGACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp TGGTGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAACGCGCCCTCATCATCTaGTTGCCTATCTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: WWLPVGCLSVNFWESSSERALII*LPIFSS
Trigger: AGAACTGAAGATAGGCAACAAGATGATGAGGGCGCG...TTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CTCAAAACCCTAACTGGTCTCGGAAGGTGGAATGGAGTAATTTTGCCCTCACTACGCGCCCTCATCATCTaGTTGCCTATCTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: LKTLTGLGRWNGVILPSLRALII*LPIFSS
Trigger: AGAACTGAAGATAGGCAACAAGATGATGAGGGCGCG...TAGTGAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp ATTCAGTACACAGCCATGGATTACTGCAAAGGAAGGGCAGAGAGACGGCATGTTAAACTGGCTTGTGCTTaGGCAGCATCACCTTCATAC +
Preference number: 5 (lower is better)
Translates to: IQYTAMDYCKGRAERRHVKLACA*AASPSY
Trigger: GTATGAAGGTGATGCTGCCAAAGCACAAGCCAGTTT...AACATGCCGTCTCTCTGCCCTTCCTTTGCAGTAATCCATGGCTGTGTACTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GAGTCAGGAGGCATGAAAATTAGTCTGGCTTCTGCCTCGAAACAGAAGTGGGACGTGGTTACCGGTTGGTaGTTTAAGCGTGAATTTCTG +
Preference number: 5 (lower is better)
Translates to: ESGGMKISLASASKQKWDVVTGW*FKREFL
Trigger: CAGAAATTCACGCTTAAACAACCAACCGGTAACCAC...GTCCCACTTCTGTTTCGAGGCAGAAGCCAGACTAATTTTCATGCCTCCTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTATTGGGGGATGCATGAAACACTTGATTCTTTaGACAGCTCAGTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: GPFLLSGRVSSLLIGGCMKHLIL*TAQFSS
Trigger: GCTGGAAAACTGAGCTGTCAAAAGAATCAAGTGTTT...CATGCATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAAGACCCCGTTCCAGCCTaGCAGCATCACTGGGTCATT +
Preference number: 5 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKDPVPA*QHHWVI
Trigger: AATGACCCAGTGATGCTGCAAGGCTGGAACGGGGTC...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CGTCCATTTTCCAGCTCTGATGGTTCTTTTCCTGCCTTGTTAGTTAGGACAAGACCTCCAGATCCCAGGTaGAGCAGAAACCTCTCTCAA +
Preference number: 5 (lower is better)
Translates to: RPFSSSDGSFPALLVRTRPPDPR*SRNLSQ
Trigger: TTGAGAGAGGTTTCTGCTCAACCTGGGATCTGGAGG...TCTTGTCCTAACTAACAAGGCAGGAAAAGAACCATCAGAGCTGGAAAATGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp CCTTCTCAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTTCCATGAGGGTGGACTaGCCCAAACCTGTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: PSQYFKKAWKFGITLFDCSMRVD*PKPVSP
Trigger: GGGAGAGACAGGTTTGGGCAAGTCCACCCTCATGGA...ACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTGAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp AGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATTTCTTCCTTCGAATTTGGTGTaGAACAGGGTGTCCATGAGG +
Preference number: 5 (lower is better)
Translates to: SRRLSLLESIHFIIQGFLPSNLV*NRVSMR
Trigger: CCTCATGGACACCCTGTTCAACACCAAATTCGAAGG...AAGAAATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CAA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAAGGCTCCCCTTCGAATTaGGTGTTGAACAGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKGSPSN*VLNRVS
Trigger: GGACACCCTGTTCAACACCAAATTCGAAGGGGAGCC...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp TGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGCAGGTAGGCCTCGAATaGTGCATCGATGAATTCCAC +
Preference number: 5 (lower is better)
Translates to: CTQMQMRAPPVCNANNYRQVGLE*CIDEFH
Trigger: GTGGAATTCATCGATGCACAATTCGAGGCCTACCTG...CCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp ACAGGACCCTGGGTCTCATGCAGCATGCAGCAAACAGCAGAGTTAATTTTTCTTGAAATGGCATCTGCTTaGGCAATGATGGGGATGATG +
Preference number: 5 (lower is better)
Translates to: TGPWVSCSMQQTAELIFLEMASA*AMMGMM
Trigger: CATCATCCCCATCATTGCCAAAGCAGATGCCATTTC...AAGAAAAATTAACTCTGCTGTTTGCTGCATGCTGCATGAGACCCAGGGTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CAA 90 bp AGCTCAGCCGCCGTCTTTCTTTGCTTGAAAGCATTCACTTCATCATCCAGGGATGCCCTCATCATCTTGTaGCCTATCTTCAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SSAAVFLCLKAFTSSSRDALIIL*PIFSSS
Trigger: AGAAGAACTGAAGATAGGCAACAAGATGATGAGGGC...ATCCCTGGATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CAA 90 bp TGGTGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAAGCCGCCGTCTTTCTTaGCTTGAAAGCATTCACTTC +
Preference number: 5 (lower is better)
Translates to: WWLPVGCLSVNFWESSSESRRLS*LESIHF
Trigger: GAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCT...TTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CGGCTTAAAAGGCTAAATGGAGTCCAGTCCAGCTGTAGCGGGGAATACTATTCAGTGGTTACCGGTTGGTaGTTTAAGCGTGAATTTCTG +
Preference number: 5 (lower is better)
Translates to: RLKRLNGVQSSCSGEYYSVVTGW*FKREFL
Trigger: CAGAAATTCACGCTTAAACAACCAACCGGTAACCAC...TGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp TCCAGCTGTAGCGGGGAATACTATTCAGTACACAGCCATGGATTACTGCAAAGGCCAAAGGCTGTCCTTTaGAAACCCTCTAAGAAATGG +
Preference number: 5 (lower is better)
Translates to: SSCSGEYYSVHSHGLLQRPKAVL*KPSKKW
Trigger: CCATTTCTTAGAGGGTTTCAAAAGGACAGCCTTTGG...CCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp TCAGAAATGTTTAACAGTGGCTGTAGACAGTCAACCCATCGAACCAGAGAAATGCCTTCGAATTTGGTGTaGAACAGGGTGTCCATGAGG +
Preference number: 5 (lower is better)
Translates to: SEMFNSGCRQSTHRTREMPSNLV*NRVSMR
Trigger: CCTCATGGACACCCTGTTCAACACCAAATTCGAAGG...CATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp GATGCTGAAATACCTCACAAGAAGAATTCGGTAAGGCTATCATTCAAGACTCTAGGCTCCCCTTCGAATTaGGTGTTGAACAGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: DAEIPHKKNSVRLSFKTLGSPSN*VLNRVS
Trigger: GGACACCCTGTTCAACACCAAATTCGAAGGGGAGCC...TAGAGTCTTGAATGATAGCCTTACCGAATTCTTCTTGTGAGGTATTTCAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GAAGACTCATCAGAGCAAACCCCCAAACACTTGATTCTTTTGACAGCTCAGTTTCAGGTAGGCCTCGAATaGTGCATCGATGAATTCCAC +
Preference number: 5 (lower is better)
Translates to: EDSSEQTPKHLILLTAQFQVGLE*CIDEFH
Trigger: GTGGAATTCATCGATGCACAATTCGAGGCCTACCTG...AAACTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp TGCTCTGGTCACTCACCAATCAATAGAGCACCAAACCTACACAGCAAACCTATAGAAATGGCATCTGCTTaGGCAATGATGGGGATGATG +
Preference number: 5 (lower is better)
Translates to: CSGHSPINRAPNLHSKPIEMASA*AMMGMM
Trigger: CATCATCCCCATCATTGCCAAAGCAGATGCCATTTC...TATAGGTTTGCTGTGTAGGTTTGGTGCTCTATTGATTGGTGAGTGACCAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp ATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACGCGTTCATGGTTCCATaGATCTCTGCCACCGACTCA +
Preference number: 5 (lower is better)
Translates to: ICTQMQMRAPPVCNANNYAFMVP*ISATDS
Trigger: TGAGTCGGTGGCAGAGATCAATGGAACCATGAACGC...GTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GAAGACTCATCAGAGCAAACCCCCAAACACTTGATTCTTTTGACAGCTCAGTTTCGCGCCCTCATCATCTaGTTGCCTATCTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: EDSSEQTPKHLILLTAQFRALII*LPIFSS
Trigger: AGAACTGAAGATAGGCAACAAGATGATGAGGGCGCG...AAACTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp TGCTCTGGTCACTCACCAATCAATAGAGCACCAAACCTACACAGCAAACCTATAAGCCGCCGTCTTTCTTaGCTTGAAAGCATTCACTTC +
Preference number: 5 (lower is better)
Translates to: CSGHSPINRAPNLHSKPISRRLS*LESIHF
Trigger: GAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCT...TATAGGTTTGCTGTGTAGGTTTGGTGCTCTATTGATTGGTGAGTGACCAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CCCTGGGTCTCATGCAGCATGCAGCAAACAGCAGAGTTAATTTTTCTTCTCTTTAGCCGCCGTCTTTCTTaGCTTGAAAGCATTCACTTC +
Preference number: 5 (lower is better)
Translates to: PWVSCSMQQTAELIFLLFSRRLS*LESIHF
Trigger: GAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCT...AAAGAGAAGAAAAATTAACTCTGCTGTTTGCTGCATGCTGCATGAGACCCAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460411.5
CDS-3UTR CAA 90 bp CGGTGGTTACCCAGCCATGGTGGTTGCAAATACCTCAGGGAAACTAACAGCAACACCTATATTCTTGCTTaGTCAACAAGAAAAGTGCGT +
Preference number: 5 (lower is better)
Translates to: RWLPSHGGCKYLRETNSNTYILA*STRKVR
Trigger: ACGCACTTTTCTTGTTGACAAAGCAAGAATATAGGT...GTTGCTGTTAGTTTCCCTGAGGTATTTGCAACCACCATGGCTGGGTAACCACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGACTGGCCTCACCTTATaGGGACAGTATGGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: VYKQIESLCETDWESGGMTGLTL*GQYGAL
Trigger: AAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGT...CATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GAGGCAGGAGCAAGTTGCGGAACTCAAAAAGAAGAAGTGAGCTTGAAGTACATGCAAACCCCCAAACACTaGATTCTTTTGACAGCTCAG +
Preference number: 5 (lower is better)
Translates to: EAGASCGTQKEEVSLKYMQTPKH*ILLTAQ
Trigger: CTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTG...CATGTACTTCAAGCTCACTTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GTTTATTCTCCCTTTTGCATCTGTGGGATACCCAGAGTTAGAGAGAGGGGAAACCAAACCCCCAAACACTaGATTCTTTTGACAGCTCAG +
Preference number: 5 (lower is better)
Translates to: VYSPFCICGIPRVRERGNQTPKH*ILLTAQ
Trigger: CTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTG...GTTTCCCCTCTCTCTAACTCTGGGTATCCCACAGATGCAAAAGGGAGAATAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp AGATCATTGCCAGGTCAACTCCATCTCTCACACTGTCACTGGCCAAACACCAAATCTCATCTCTTCTTATaGGGGGATGCATGCAAAATG +
Preference number: 5 (lower is better)
Translates to: RSLPGQLHLSHCHWPNTKSHLFL*GDACKM
Trigger: CATTTTGCATGCATCCCCCAATAAGAAGAGATGAGA...TTTGGTGTTTGGCCAGTGACAGTGTGAGAGATGGAGTTGACCTGGCAATGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GAAGACTCATCAGAGCAAACCCCCAAACACTTGATTCTTTTGACAGCTCAGTTTGAAATGGCATCTGCTTaGGCAATGATGGGGATGATG +
Preference number: 5 (lower is better)
Translates to: EDSSEQTPKHLILLTAQFEMASA*AMMGMM
Trigger: CATCATCCCCATCATTGCCAAAGCAGATGCCATTTC...AAACTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp ACACTTCCATTTAAAATACCATGTGAGTCAGGAAGAGAGCTTCTTGCCTGGACAAGCCGCCGTCTTTCTTaGCTTGAAAGCATTCACTTC +
Preference number: 5 (lower is better)
Translates to: TLPFKIPCESGRELLAWTSRRLS*LESIHF
Trigger: GAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCT...TGTCCAGGCAAGAAGCTCTCTTCCTGACTCACATGGTATTTTAAATGGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp GAGTCAGGAGGCATGAAAATTAGTCTGGCTTCTGCCTCGAAACAGAAGTGGGACACCTATATTCTTGCTTaGTCAACAAGAAAAGTGCGT +
Preference number: 5 (lower is better)
Translates to: ESGGMKISLASASKQKWDTYILA*STRKVR
Trigger: ACGCACTTTTCTTGTTGACAAAGCAAGAATATAGGT...GTCCCACTTCTGTTTCGAGGCAGAAGCCAGACTAATTTTCATGCCTCCTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp TGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATTACCGGCCAAAGGCTGTCCTTTaGAAACCCTCTAAGAAATGG +
Preference number: 5 (lower is better)
Translates to: CTQMQMRAPPVCNANNYRPKAVL*KPSKKW
Trigger: CCATTTCTTAGAGGGTTTCAAAAGGACAGCCTTTGG...CCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp AGCCTACAAAGTGGGATTTATTATTCCTGCTACTGGCCTCACCTTATTGGGACAGATTTTGAGCACAGCTaGAGTGCAGTTACTTCGAGT +
Preference number: 5 (lower is better)
Translates to: SLQSGIYYSCYWPHLIGTDFEHS*SAVTSS
Trigger: ACTCGAAGTAACTGCACTCAAGCTGTGCTCAAAATC...TGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CTCAAACAAAACCTTGTGAACAGAACAGTACTTTCATACCCACAGCTGAGGTGTGGGACACATGAACACTaGTTGAGTGGTGTGGTGTAT +
Preference number: 5 (lower is better)
Translates to: LKQNLVNRTVLSYPQLRCGTHEH*LSGVVY
Trigger: ATACACCACACCACTCAACAAGTGTTCATGTGTCCC...ACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTGTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAAGAAATGGCATCTGCTTaGGCAATGATGGGGATGATG +
Preference number: 5 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKEMASA*AMMGMM
Trigger: CATCATCCCCATCATTGCCAAAGCAGATGCCATTTC...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GAAGACTCATCAGAGCAAACCCCCAAACACTTGATTCTTTTGACAGCTCAGTTTGCCCTCATCATCTTGTaGCCTATCTTCAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: EDSSEQTPKHLILLTAQFALIIL*PIFSSS
Trigger: AGAAGAACTGAAGATAGGCAACAAGATGATGAGGGC...AAACTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp ACACTTCCATTTAAAATACCATGTGAGTCAGGAAGAGAGCTTCTTGCCTGGACAGCCCTCATCATCTTGTaGCCTATCTTCAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: TLPFKIPCESGRELLAWTALIIL*PIFSSS
Trigger: AGAAGAACTGAAGATAGGCAACAAGATGATGAGGGC...TGTCCAGGCAAGAAGCTCTCTTCCTGACTCACATGGTATTTTAAATGGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp AAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGGAGGCATGAAAATTCGCGCCCTCATCATCTaGTTGCCTATCTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: KQIESLCETDWESGGMKIRALII*LPIFSS
Trigger: AGAACTGAAGATAGGCAACAAGATGATGAGGGCGCG...AATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp TTGGAAAGAAAGTTAAGGGCCTTTTCTTCTCTCCGGCCGAGTCTCATCTCTTCTTCTCAACTCCTTAAATaGGAAAGAAAGTTAAGGGCC +
Preference number: 5 (lower is better)
Translates to: LERKLRAFSSLRPSLISSSQLLK*ERKLRA
Trigger: GGCCCTTAACTTTCTTTCCAATTTAAGGAGTTGAGA...AGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAGGCCCTTAACTTTCTTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTGTTAGCCACAGATCATaGCCAGGTCAACTCCATCTC +
Preference number: 5 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLVSHRS*PGQLHL
Trigger: GAGATGGAGTTGACCTGGCAATGATCTGTGGCTAAC...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CATTCACCAAATGAACTAGAAGACTCATCAGAGCAAACCCCCAAACACTTGATTGCCCTCATCATCTTGTaGCCTATCTTCAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: HSPNELEDSSEQTPKHLIALIIL*PIFSSS
Trigger: AGAAGAACTGAAGATAGGCAACAAGATGATGAGGGC...AATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTCTAGTTCATTTGGTGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp TGGTTACCGGTTGGTTGTTTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGTGGGTCTAATACTTTaGAATTATTCAGAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: WLPVGCLSVNFWESSSEAVGLIL*NYSELL
Trigger: GAGAAGCTCTGAATAATTCAAAAGTATTAGACCCAC...AGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTGGTTTATTCTCCCTTTaGCATCTGTGGGATACCCAG +
Preference number: 5 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLGLFSL*HLWDTQ
Trigger: CTGGGTATCCCACAGATGCAAAAGGGAGAATAAACC...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp AATGTAACGTATATAAACAGATTGAATCCCTTTGTGAAACTGATTGGGAGTCAGCAGGTAGGCCTCGAATaGTGCATCGATGAATTCCAC +
Preference number: 5 (lower is better)
Translates to: NVTYINRLNPFVKLIGSQQVGLE*CIDEFH
Trigger: GTGGAATTCATCGATGCACAATTCGAGGCCTACCTG...CTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATGCCCTCATCATCTTGTaGCCTATCTTCAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LICTQMQMRAPPVCNANNALIIL*PIFSSS
Trigger: AGAAGAACTGAAGATAGGCAACAAGATGATGAGGGC...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp TGCTCTGGTCACTCACCAATCAATAGAGCACCAAACCTACACAGCAAACCTATAACCTATATTCTTGCTTaGTCAACAAGAAAAGTGCGT +
Preference number: 5 (lower is better)
Translates to: CSGHSPINRAPNLHSKPITYILA*STRKVR
Trigger: ACGCACTTTTCTTGTTGACAAAGCAAGAATATAGGT...TATAGGTTTGCTGTGTAGGTTTGGTGCTCTATTGATTGGTGAGTGACCAGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp TTAATCTGTACACAAATGCAAATGAGGGCGCCTCCGGTTTGTAATGCAAATAATGATTTTGAGCACAGCTaGAGTGCAGTTACTTCGAGT +
Preference number: 5 (lower is better)
Translates to: LICTQMQMRAPPVCNANNDFEHS*SAVTSS
Trigger: ACTCGAAGTAACTGCACTCAAGCTGTGCTCAAAATC...ATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp AATGGAGTAATTTTGCCCTCACTAAGCTTAAACCCCCTCCCTTCTCTACCTAAGCACTCACATGGTATTTaGATGCAAGTTAAACCAATG +
Preference number: 5 (lower is better)
Translates to: NGVILPSLSLNPLPSLPKHSHGI*MQVKPM
Trigger: CATTGGTTTAACTTGCATCAAAATACCATGTGAGTG...CTTAGGTAGAGAAGGGAGGGGGTTTAAGCTTAGTGAGGGCAAAATTACTCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360156.11
CDS-3UTR CAA 90 bp TTAAGCGTGAATTTCTGGGAAAGCAGCTCTGAAGCTGGACATAGAATCATCAAATATTTTCTTCAGCAGTaGTGTTTTATGGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: LSVNFWESSSEAGHRIIKYFLQQ*CFMGRA
Trigger: AGCCCTTCCCATAAAACACAACTGCTGAAGAAAATA...TTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTTCTCATCTCTTCTTATaGGGGGATGCATGCAAAATG +
Preference number: 5 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLSHLFL*GDACKM
Trigger: CATTTTGCATGCATCCCCCAATAAGAAGAGATGAGA...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp GATGCTGAAATACCTCACAAGAAGAATTCGGTAAGGCTATCATTCAAGACTCTAAAACACTTGATTCTTTaGACAGCTCAGTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: DAEIPHKKNSVRLSFKTLKHLIL*TAQFSS
Trigger: GCTGGAAAACTGAGCTGTCAAAAGAATCAAGTGTTT...TAGAGTCTTGAATGATAGCCTTACCGAATTCTTCTTGTGAGGTATTTCAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354416.7
ENST00000394610.7
CDS-3UTR CAA 90 bp CAATACTTCAAAAAGGCCTGGAAATTTGGCATAACCTTGTTTGACTGTGTGCTTGTGGGTCTAATACTTTaGAATTATTCAGAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: QYFKKAWKFGITLFDCVLVGLIL*NYSELL
Trigger: GAGAAGCTCTGAATAATTCAAAAGTATTAGACCCAC...AAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343984.5
ENST00000354416.7
ENST00000394610.7
CDS GCA 72 bp ATCGGTCGCTGCCATCGCTCCTGCGTCCGCCAGGGCTaGCACGGGTGCCGCCGCAACGGGAGCTACTGCACA +
Preference number: 6 (lower is better)
Translates to: IGRCHRSCVRQG*HGCRRNGSYCT
Trigger: TGTGCAGTAGCTCCCGTTGCGGCGGCACCCGTGGCAGCCCTGGCGGACGCAGGAGCGATGGCAGCGACCGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343984.5
ENST00000354228.8
ENST00000354416.7
ENST00000360156.11
ENST00000394610.7
ENST00000460411.5
ENST00000489216.5
CDS GCA 72 bp GCAACCTTCACCCACCTGGCGAGCTATATCGGTCGCTaGCATCGCTCCTGCGTCCGCCAGGGCTGCCACGGG +
Preference number: 6 (lower is better)
Translates to: ATFTHLASYIGR*HRSCVRQGCHG
Trigger: CCCGTGGCAGCCCTGGCGGACGCAGGAGCGATGGCAGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343984.5
ENST00000354228.8
ENST00000354416.7
ENST00000360156.11
ENST00000394610.7
ENST00000460411.5
ENST00000489216.5
CDS GCA 72 bp CAGGGCTGCCACGGGTGCCGCCGCAACGGGAGCTACTaGACAGGAAACAGAGGAGCTCCTCCGACAAAGAGA +
Preference number: 6 (lower is better)
Translates to: QGCHGCRRNGSY*TGNRGAPPTKR
Trigger: TCTCTTTGTCGGAGGAGCTCCTCTGTTTCCTGTGCAGTAGCTCCCGTTGCGGCGGCACCCGTGGCAGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343984.5
ENST00000354228.8
ENST00000354416.7
ENST00000360156.11
ENST00000460411.5
ENST00000489216.5
CDS GCA 72 bp GGACAGATGGGCTGGGCCTCTGGGACCACACCCCTCTaGTACTCTCAACTCCCCAAGCTCAGGGAATCCAAA +
Preference number: 6 (lower is better)
Translates to: GQMGWASGTTPL*YSQLPKLRESK
Trigger: TTTGGATTCCCTGAGCTTGGGGAGTTGAGAGTAGCAGAGGGGTGTGGTCCCAGAGGCCCAGCCCATCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481072.1
CDS CCA 72 bp TTGCAGGGCTTTCCTGAGCAAGCTGGACAGATGGGCTaGGCCTCTGGGACCACACCCCTCTGCTACTCTCAA +
Preference number: 6 (lower is better)
Translates to: LQGFPEQAGQMG*ASGTTPLCYSQ
Trigger: TTGAGAGTAGCAGAGGGGTGTGGTCCCAGAGGCCCAGCCCATCTGTCCAGCTTGCTCAGGAAAGCCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481072.1
CDS CAA 90 bp ACACCCGGCTGTGTGTGGGTGGCTGGCTCCCCTTCGAATTTGGTGTaGAACAGGGTGTCCATGAGGGTGGACTTGCCCAAACCTGTCTCT +
Preference number: 6 (lower is better)
Translates to: TPGCVWVAGSPSNLV*NRVSMRVDLPKPVS
Trigger: AGAGACAGGTTTGGGCAAGTCCACCCTCATGGACACCCTGTTCAACACCAAATTCGAAGGGGAGCCAGCCACCCACACACAGCCGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343984.5
ENST00000354228.8
ENST00000354416.7
ENST00000360156.11
ENST00000394610.7
ENST00000460411.5
ENST00000489216.5
CDS CCA 72 bp AAGCAGAAGCCCTGGCTGACGGACTTATTCACCAGCTaGTCAGGCAAGCTGTCAAACCCCACATGTCCAGCC +
Preference number: 6 (lower is better)
Translates to: KQKPWLTDLFTS*SGKLSNPTCPA
Trigger: GGCTGGACATGTGGGGTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343984.5
ENST00000354228.8
ENST00000354416.7
ENST00000360156.11
ENST00000394610.7
ENST00000460411.5
ENST00000489216.5
CDS CAA 90 bp GAAGGCACCACCCCAGAGCAGCCTGCTACTTACTTTTTCTTCTCTTaGTCTCTCTTCAGAGTCTGTGAGCCTCCAGCCTGGGAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: EGTTPEQPATYFFFS*SLFRVCEPPAWEPW
Trigger: CCAGGGCTCCCAGGCTGGAGGCTCACAGACTCTGAAGAGAGACAAAGAGAAGAAAAAGTAAGTAGCAGGCTGCTCTGGGGTGGTGCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481072.1
CDS CAA 72 bp TGTGTGTGGGTGGCTGGCTCCCCTTCGAATTTGGTGTaGAACAGGGTGTCCATGAGGGTGGACTTGCCCAAA +
Preference number: 6 (lower is better)
Translates to: CVWVAGSPSNLV*NRVSMRVDLPK
Trigger: TTTGGGCAAGTCCACCCTCATGGACACCCTGTTCAACACCAAATTCGAAGGGGAGCCAGCCACCCACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343984.5
ENST00000354228.8
ENST00000354416.7
ENST00000360156.11
ENST00000394610.7
ENST00000460411.5
ENST00000489216.5
CDS GCA 72 bp GCCTCGTTTTCAACCTGCACAGTGCCCCAAGGATACTaGCGCGCCCTCATCATCTTGTTGCCTATCTTCAGT +
Preference number: 6 (lower is better)
Translates to: ASFSTCTVPQGY*RALIILLPIFS
Trigger: ACTGAAGATAGGCAACAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCACTGTGCAGGTTGAAAACGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343984.5
ENST00000354228.8
ENST00000354416.7
ENST00000360156.11
ENST00000394610.7
ENST00000489216.5
CDS GCA 72 bp CTACTCTCAACTCCCCAAGCTCAGGGAATCCAAAGGTaGCACAGGGATGCTGGGACCAGTTATAGGTACCTC +
Preference number: 6 (lower is better)
Translates to: LLSTPQAQGIQR*HRDAGTSYRYL
Trigger: GAGGTACCTATAACTGGTCCCAGCATCCCTGTGGCACCTTTGGATTCCCTGAGCTTGGGGAGTTGAGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481072.1
CDS GCA 72 bp TGTCTACAGGAAGCCCAAACAGGACCCTGGGTCTCATaGAGCATGCAGCAAACAGCAGAGTTAACTGTAAAA +
Preference number: 6 (lower is better)
Translates to: CLQEAQTGPWVS*SMQQTAELTVK
Trigger: TTTTACAGTTAACTCTGCTGTTTGCTGCATGCTGCATGAGACCCAGGGTCCTGTTTGGGCTTCCTGTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467310.1
CDS GCA 72 bp TGTCTACAGGAAGCCCAAACAGGACCCTGGGTCTCATaGAGCATGCAGCAAACAGCAGAGTTAATTTTTCTT +
Preference number: 6 (lower is better)
Translates to: CLQEAQTGPWVS*SMQQTAELIFL
Trigger: AAGAAAAATTAACTCTGCTGTTTGCTGCATGCTGCATGAGACCCAGGGTCCTGTTTGGGCTTCCTGTAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394610.7