RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEPTIN5 (Homo sapiens)

Ensembl gene IDs: ENSG00000184702

Ensembl transcript IDs: ENST00000383045.7, ENST00000395109.6, ENST00000406172.6, ENST00000406395.5, ENST00000412544.5, ENST00000431124.5, ENST00000438754.6, ENST00000455784.7, ENST00000470814.1, ENST00000477238.1, ENST00000480423.5, ENST00000490204.1

Found 565 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTaGGAGGGCGTCCCGGAGACGGACGGTGTGTCCGCGGCGAGCGTC +
Preference number: 1 (lower is better)
Translates to: PRVSGSGTVRSGVQG*EGVPETDGVSAASV
Trigger: GACGCTCGCCGCGGACACACCGTCCGTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
3UTR TCA 90 bp GCGGAGACAACCCGGCGGGTGAGCAGCACCGCGGAGGAGCATCCCTaGCGCCCGCCTCCGCCGCCCCCGCCGCCCCACATACTTCCTCAT +
Preference number: 1 (lower is better)
Translates to: AETTRRVSSTAEEHP*RPPPPPPPPHILPH
Trigger: ATGAGGAAGTATGTGGGGCGGCGGGGGCGGCGGAGGCGGGCGTCAGGGATGCTCCTCCGCGGTGCTGCTCACCCGCCGGGTTGTCTCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR TCA 90 bp ATCTCCTGCATGCGCCTCAGCTGCGGGCGGAGACAACCCGGCGGGTaGGCAGCACCGCGGAGGAGCATCCCTGACGCCCGCCTCCGCCGC +
Preference number: 1 (lower is better)
Translates to: ISCMRLSCGRRQPGG*AAPRRSIPDARLRR
Trigger: GCGGCGGAGGCGGGCGTCAGGGATGCTCCTCCGCGGTGCTGCTCACCCGCCGGGTTGTCTCCGCCCGCAGCTGAGGCGCATGCAGGAGAT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR GCA 90 bp CTGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTaGTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATC +
Preference number: 1 (lower is better)
Translates to: LPSFACLPEQGLRFG*CDRPGAGEGQGRRI
Trigger: GATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR GCA 90 bp GTCCGCGGCGAGCGTCACTGGTCCTGCATCTGCTGCTTCATCCTCTaGAGCATCTCCTGCATGCGCCTCAGCTGCGGGCGGAGACAACCC +
Preference number: 1 (lower is better)
Translates to: VRGERHWSCICCFIL*SISCMRLSCGRRQP
Trigger: GGGTTGTCTCCGCCCGCAGCTGAGGCGCATGCAGGAGATGCTGCAGAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR CCA 90 bp GCTTCTCAGTCTCGGCGTCCGGGGTGGGCAGCGGCAGGATCGGGATaGGGCTCTCCATGCGGCTGTCCTGGGTCAGTTTGCTGGTCATCT +
Preference number: 1 (lower is better)
Translates to: ASQSRRPGWAAAGSG*GSPCGCPGSVCWSS
Trigger: AGATGACCAGCAAACTGACCCAGGACAGCCGCATGGAGAGCCCCATCCCGATCCTGCCGCTGCCCACCCCGGACGCCGAGACTGAGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR GCA 90 bp AGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTTGCCTGCCTaGCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGTCCGGGGG +
Preference number: 1 (lower is better)
Translates to: RPRILGILFCLALPA*QSRACGLGAVTVRG
Trigger: CCCCCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR CCA 90 bp AGGCGTCTGGGGATAAGGGAAGACTCGGCCCGCCTCGACAGAAAATaGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGCAAAGG +
Preference number: 1 (lower is better)
Translates to: RRLGIREDSARLDRK*GLSTRWVTRGSRQR
Trigger: CCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTCTTCCCTTATCCCCAGACGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR GCA 90 bp GGAGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGCATCTaGTGCTTCATCCTCTGCAGCATCTCCTGCATGCGCCTCAGTTCC +
Preference number: 1 (lower is better)
Translates to: GDGRCVRGERHWSCI*CFILCSISCMRLSS
Trigger: GGAACTGAGGCGCATGCAGGAGATGCTGCAGAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCTCC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406395.5
ENST00000438754.6
3UTR GCA 90 bp GAACAGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTTGCCTaGCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGTCCG +
Preference number: 1 (lower is better)
Translates to: EQTQDPGNPLLPSFA*LPEQGLRFGCCDRP
Trigger: CGGACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR GCA 90 bp AGCACTGGGGCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTaGCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGT +
Preference number: 1 (lower is better)
Translates to: STGAGNRPRILGILF*LALPACQSRACGLG
Trigger: ACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGCCCCAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR GCA 90 bp GACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGCATCTGCTaGTTCATCCTCTGCAGCATCTCCTGCATGCGCCTCAGTTCCTCA +
Preference number: 1 (lower is better)
Translates to: DGRCVRGERHWSCIC*FILCSISCMRLSSS
Trigger: TGAGGAACTGAGGCGCATGCAGGAGATGCTGCAGAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406395.5
ENST00000438754.6
3UTR CCA 90 bp AGGACAGGACGCGGCATTCACAACGGAAGAAAACGGAGCATCGTGTaGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGCCTAGGC +
Preference number: 1 (lower is better)
Translates to: RTGRGIHNGRKRSIV*REGIMRVGTSGGLG
Trigger: GCCTAGGCCTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
3UTR TCA 90 bp GCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCATTTaGTTCAGCCCAACCCTGCCCGCTAGGCGTCTGGGGATAAGGGAA +
Preference number: 1 (lower is better)
Translates to: APCSLWPPYVWRAPI*FSPTLPARRLGIRE
Trigger: TTCCCTTATCCCCAGACGCCTAGCGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR GCA 90 bp GTCCGCGGCGAGCGTCACTGGTCCTGCATCTGCTGCTTCATCCTCTaGAGCATCTCCTGCATGCGCCTCAGTTCCTCATCCTTCATCCTG +
Preference number: 1 (lower is better)
Translates to: VRGERHWSCICCFIL*SISCMRLSSSSFIL
Trigger: CAGGATGAAGGATGAGGAACTGAGGCGCATGCAGGAGATGCTGCAGAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCGGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406395.5
ENST00000438754.6
3UTR-3UTR TCA 90 bp GCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGGCGGTTTGGGTGCTGTaGCCGTCCGGGGGCGGGGGA +
Preference number: 2 (lower is better)
Translates to: ARAGDGTESCQEVAHRPVAVWVL*PSGGGG
Trigger: TCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGC...CACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR TCA 90 bp CGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCAGACAACCCGGCGGGTaGGCAGCACCGCGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: RVSGSGTVRSGVQGCEGVRQPGG*AAPRRS
Trigger: GCTCCTCCGCGGTGCTGCTCACCCGCCGGGTTGTCT...GACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR-3UTR GCA 90 bp GCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGGGCCTGCGGTTTGGGTaGTGTGACCGTCCGGGGGCG +
Preference number: 2 (lower is better)
Translates to: ARAGDGTESCQEVAHRPVGLRFG*CDRPGA
Trigger: CGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCC...CACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR GCA 90 bp CGAGCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGGCCTGCGGTTTGGGTaGTGTGACCGTCCGGGGGCG +
Preference number: 2 (lower is better)
Translates to: RARAGDGTESCQEVAHRPGLRFG*CDRPGA
Trigger: CGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCC...TGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGCTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CCA 90 bp ACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGGCCCTGGTCTCAGCACTCGCTaGGTGACCCGCGGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: TAPRVARRWLTAQCPGGPGLSTR*VTRGSR
Trigger: CCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACC...AGGGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CCA 90 bp GCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCTCTCGGCGTCCGGGGTaGGCAGCGGCAGGATCGGGA +
Preference number: 2 (lower is better)
Translates to: AVTVRGRGKGKGGGSLKSSRRPG*AAAGSG
Trigger: TCCCGATCCTGCCGCTGCCCACCCCGGACGCCGAGA...GGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR-3UTR TCA 90 bp GCCTCGAGCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGTCAGCACTCGCTGGGTaGCCCGCGGGAGCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: ASSEGRGRHRELPGGGSPSALAG*PAGAGK
Trigger: TTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGA...CGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGCTCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CCA 90 bp TCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGGGGAACAGTCCGGTCTaGTGTCCAGGGGTGCGAGGG +
Preference number: 2 (lower is better)
Translates to: SGSGTVRSGVQGCEGVPEGNSPV*CPGVRG
Trigger: CCCTCGCACCCCTGGACACCAGACCGGACTGTTCCC...CTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CCA 90 bp CCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGTCAGCTGGGGGCTGTaGCCCCGCGTCTCCGGGTCG +
Preference number: 2 (lower is better)
Translates to: PPRQKMGSQHSLGDPREQVSWGL*PRVSGS
Trigger: CGACCCGGAGACGCGGGGCCACAGCCCCCAGCTGAC...CTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR CAA 90 bp CTCTTCTGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTaGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: LFCLALPACQSRACG*GAVTVRGRGKGKGG
Trigger: GCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CCA 90 bp AAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGCAAAGGAGGGCGTCAGCTGGGGGCTGTaGCCCCGCGTCTCCGGGTCG +
Preference number: 2 (lower is better)
Translates to: KMGSQHSLGDPREQAKEGVSWGL*PRVSGS
Trigger: CGACCCGGAGACGCGGGGCCACAGCCCCCAGCTGAC...GCCCTCCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR TCA 90 bp CGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCGCCCAACTTCGCTCCTaGTCCCCCAAGGTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: RFGCCDRPGAGEGQGRRIAQLRS*SPKVRE
Trigger: CTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGC...GATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CCA 90 bp CTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGGGGAGAAGAGGCCTCGAGAGAGTTGCCAGGAGGTaGCTCACCGCCCAGTGCCCC +
Preference number: 2 (lower is better)
Translates to: LGSGSRHTTAVLGRRGLERVARR*LTAQCP
Trigger: GGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCT...CTCGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR GCA 90 bp CTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGGGGAGAAGAGGCCTCGAGCTGCCTAGCTTTGCCTaGCTGCCAGAGCAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: LGSGSRHTTAVLGRRGLELPSFA*LPEQGL
Trigger: CAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAG...CTCGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR GCA 90 bp AGGCCTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGGGGAGAAGAGGCCTGATTCAGCCCAACCCTaGCCGCTAGGCGTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: RPRLRIPAHHSGAGEKRPDSAQP*PLGVWG
Trigger: TCCCCAGACGCCTAGCGGGCAGGGTTGGGCTGAATC...AGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CCA 90 bp GTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCAGGGAACAGTCCGGTCTaGTGTCCAGGGGTGCGAGGG +
Preference number: 2 (lower is better)
Translates to: VTTPLLAASGLLMSGGLPGNSPV*CPGVRG
Trigger: CCCTCGCACCCCTGGACACCAGACCGGACTGTTCCC...TGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR TCA 90 bp GGTGGGAACATCGGGAGGCCTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTCGGAAACAGACACAATaGCCTGGGAGGGGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: GGNIGRPRLRIPAHHSGARKQTQ*PGRGWC
Trigger: GCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCG...AGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAGGCCTCCCGATGTTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR TCA 90 bp GGTGGGAACATCGGGAGGCCTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGCCCAACTTCGCTCCTaGTCCCCCAAGGTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: GGNIGRPRLRIPAHHSGAAQLRS*SPKVRE
Trigger: CTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGC...AGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAGGCCTCCCGATGTTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR GCA 90 bp CGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCTGTCCTGGGTCAGTTTaGTGGTCATCTGCTGGATGC +
Preference number: 2 (lower is better)
Translates to: RFGCCDRPGAGEGQGRRICPGSV*WSSAGC
Trigger: GCATCCAGCAGATGACCAGCAAACTGACCCAGGACA...GATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR-3UTR GCA 90 bp TCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGGAGCGTCACTGGTCCTaGATCTGCTGCTTCATCCTC +
Preference number: 2 (lower is better)
Translates to: SARLDRKWGLSTRWVTRGERHWS*ICCFIL
Trigger: GAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTC...CCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
3UTR-3UTR GCA 90 bp TCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGGCAGCATCTCCTGCATaGGCCTCAGTTCCTCATCCT +
Preference number: 2 (lower is better)
Translates to: SARLDRKWGLSTRWVTRGAASPA*ASVPHP
Trigger: AGGATGAGGAACTGAGGCGCATGCAGGAGATGCTGC...CCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406395.5
ENST00000438754.6
3UTR-3UTR CCA 90 bp CTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGCCCGCTAGGCGTCGGTCTCAGCACTCGCTaGGTGACCCGCGGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LMSGGLPFDSAQPCPLGVGLSTR*VTRGSR
Trigger: CCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACC...GACGCCTAGCGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CCA 90 bp CTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGGGGAGAAGAGGCCTCGAGCGCCTCGACAGAAAATaGGGTCTCAGCACTCGCTGG +
Preference number: 2 (lower is better)
Translates to: LGSGSRHTTAVLGRRGLERLDRK*GLSTRW
Trigger: CCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCG...CTCGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR CAA 90 bp GCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTaGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACC +
Preference number: 2 (lower is better)
Translates to: AGNRPRILGILFCLA*PACQSRACGLGAVT
Trigger: GGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR CAA 90 bp GGCCGGGCTGTGGAGAAGGGGTGTAAGCGGTCACGACCCCGCTCCTaGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCATTTGATT +
Preference number: 2 (lower is better)
Translates to: GRAVEKGCKRSRPRS*QPLASLCLEGSHLI
Trigger: AATCAAATGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTTCTCCACAGCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR GCA 90 bp GCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTACGTCCTTGAGGTCGTaGATATGCGTGCGGATGAGC +
Preference number: 2 (lower is better)
Translates to: AGEGQGRRISEVPPNFAPTSLRS*ICVRMS
Trigger: GCTCATCCGCACGCATATGCACGACCTCAAGGACGT...AGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR-3UTR GCA 90 bp CGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCATTTGCTCCCAAGTCCGTTCTaGAGCACTGGGGCAGGGAAC +
Preference number: 2 (lower is better)
Translates to: RPRSLQPLASLCLEGSHLLPSPF*STGAGN
Trigger: GTTCCCTGCCCCAGTGCTGCAGAACGGACTTGGGAG...CAAATGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR GCA 90 bp TCACCAACATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGTGGCTCACCGCCCAGTaGCCCGGGGGCCCTCCAGGT +
Preference number: 2 (lower is better)
Translates to: SPTLFSCHQDRTRHSQRKWLTAQ*PGGPPG
Trigger: ACCTGGAGGGCCCCCGGGGCACTGGGCGGTGAGCCA...CTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CCA 90 bp AGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGGAACAGTCCGGTCTaGTGTCCAGGGGTGCGAGGG +
Preference number: 2 (lower is better)
Translates to: RKRSIVWREGIMRVGTSGGNSPV*CPGVRG
Trigger: CCCTCGCACCCCTGGACACCAGACCGGACTGTTCCC...TCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CCA 90 bp GCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTACAGACACAATGACCTaGGAGGGGGTGGTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: AGEGQGRRISEVPPNFAPTDTMT*EGVVLR
Trigger: TCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGT...AGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR TCA 90 bp AAGGGGTGTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTTGGAGGGCTCCCATTTaGTTCAGCCCAACCCTGCCC +
Preference number: 2 (lower is better)
Translates to: KGCKRSRPRSLQPLASLCWRAPI*FSPTLP
Trigger: GGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCA...ACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CCA 90 bp CCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGCCTGGGTCAGTTTGCTaGTCATCTGCTGGATGCAGT +
Preference number: 2 (lower is better)
Translates to: PPRQKMGSQHSLGDPREQPGSVC*SSAGCS
Trigger: ACTGCATCCAGCAGATGACCAGCAAACTGACCCAGG...CTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR-3UTR CCA 90 bp CACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGCGCGGCGAGCGTCACTaGTCCTGCATCTGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: HQDRTRHSQRKKTEHRVARGERH*SCICCF
Trigger: GAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCG...CGCCACACGATGCTCCGTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406172.6
ENST00000438754.6
3UTR-3UTR CCA 90 bp ATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGTCTCAGCACTCGCTaGGTGACCCGCGGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: IHNGRKRSIVWREGIMRVGLSTR*VTRGSR
Trigger: CCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACC...CACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR GCA 90 bp GGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATGAGCGTCACTGGTCCTaGATCTGCTGCTTCATCCTC +
Preference number: 2 (lower is better)
Translates to: GEGQGRRISEVPPNFAPDERHWS*ICCFIL
Trigger: GAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTC...ATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
3UTR-3UTR GCA 90 bp TTCTGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGCTCTGCAGCATCTCCTaGATGCGCCTCAGTTCCTCA +
Preference number: 2 (lower is better)
Translates to: FCLALPACQSRACGLGAVLCSIS*MRLSSS
Trigger: TGAGGAACTGAGGCGCATGCAGGAGATGCTGCAGAG...CACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406395.5
ENST00000438754.6
3UTR-3UTR GCA 90 bp CTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGTCTTGAGGTCGTGCATATaGGTGCGGATGAGCATGTTG +
Preference number: 2 (lower is better)
Translates to: LALPACQSRACGLGAVTVLRSCI*VRMSML
Trigger: CAACATGCTCATCCGCACGCATATGCACGACCTCAA...GACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR-3UTR GCA 90 bp AACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACACTCCCAAGTCCGTTCTaGAGCACTGGGGCAGGGAAC +
Preference number: 2 (lower is better)
Translates to: NGRKRSIVWREGIMRVGTLPSPF*STGAGN
Trigger: GTTCCCTGCCCCAGTGCTGCAGAACGGACTTGGGAG...TGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR GCA 90 bp CATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACGGGACGGCACCGAGAGTTaGCAGGAGGTGGCTCACCGC +
Preference number: 2 (lower is better)
Translates to: HCSPVTRTGRGIHNGRKRDGTES*QEVAHR
Trigger: GCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTC...CCGTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR GCA 90 bp AAGGGGTGTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTGCAGCATCTCCTGCATaGGCCTCAGTTCCTCATCCT +
Preference number: 2 (lower is better)
Translates to: KGCKRSRPRSLQPLASLCAASPA*ASVPHP
Trigger: AGGATGAGGAACTGAGGCGCATGCAGGAGATGCTGC...ACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406395.5
ENST00000438754.6
3UTR-3UTR GCA 90 bp AACATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACTGCATGCGCCTCAGCTaGGGGCGGAGACAACCCGGC +
Preference number: 2 (lower is better)
Translates to: NIVLLSPGQDAAFTTEENCMRLS*GRRQPG
Trigger: GCCGGGTTGTCTCCGCCCGCAGCTGAGGCGCATGCA...GTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR-3UTR GCA 90 bp AGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGAGCGTCACTGGTCCTaGATCTGCTGCTTCATCCTC +
Preference number: 2 (lower is better)
Translates to: RKRSIVWREGIMRVGTSGERHWS*ICCFIL
Trigger: GAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTC...TCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
3UTR-3UTR GCA 90 bp TCTGGCCTCCTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGCCCGTGGTCCTGCATCTGCTaGTTCATCCTCTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: SGLLMSGGLPFDSAQPCPWSCIC*FILCSI
Trigger: GATGCTGCAGAGGATGAAGCAGCAGATGCAGGACCA...CGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAGGAGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
3UTR-3UTR GCA 90 bp AACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACACTCTGCAGCATCTCCTaGATGCGCCTCAGTTCCTCA +
Preference number: 2 (lower is better)
Translates to: NGRKRSIVWREGIMRVGTLCSIS*MRLSSS
Trigger: TGAGGAACTGAGGCGCATGCAGGAGATGCTGCAGAG...TGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406395.5
ENST00000438754.6
3UTR-3UTR CCA 90 bp AACATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACGCGGCAGGATCGGGATaGGGCTCTCCATGCGGCTGT +
Preference number: 2 (lower is better)
Translates to: NIVLLSPGQDAAFTTEENAAGSG*GSPCGC
Trigger: ACAGCCGCATGGAGAGCCCCATCCCGATCCTGCCGC...GTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR-3UTR GCA 90 bp CAACATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACTGCCTAGCTTTGCCTaGCTGCCAGAGCAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: QHCSPVTRTGRGIHNGRKLPSFA*LPEQGL
Trigger: CAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAG...TTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR GCA 90 bp ATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGCTGGGAATCCTCTTCTaGCTAGCTTTGCCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: IHNGRKRSIVWREGIMRVLGILF*LALPAC
Trigger: GCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAG...CACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CCA 90 bp ATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGTCCATGCGGCTGTCCTaGGTCAGTTTGCTGGTCATC +
Preference number: 2 (lower is better)
Translates to: IHNGRKRSIVWREGIMRVSMRLS*VSLLVI
Trigger: GATGACCAGCAAACTGACCCAGGACAGCCGCATGGA...CACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR TCA 72 bp ACCCGGCGGGTGAGCAGCACCGCGGAGGAGCATCCCTaGCGCCCGCCTCCGCCGCCCCCGCCGCCCCACATA +
Preference number: 3 (lower is better)
Translates to: TRRVSSTAEEHP*RPPPPPPPPHI
Trigger: TATGTGGGGCGGCGGGGGCGGCGGAGGCGGGCGTCAGGGATGCTCCTCCGCGGTGCTGCTCACCCGCCGGGT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR GCA 72 bp GCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTaGCCCGGGGGCCCTCCAGGTCGGGCCGGGCTGTGG +
Preference number: 3 (lower is better)
Translates to: APRVARRWLTAQ*PGGPPGRAGLW
Trigger: CCACAGCCCGGCCCGACCTGGAGGGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR GCA 72 bp AGGCCTCGAGCGAGGGCAGGGGACGGCACCGAGAGTTaGCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGG +
Preference number: 3 (lower is better)
Translates to: RPRARAGDGTES*QEVAHRPVPRG
Trigger: CCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGCTCGAGGCCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR TCA 72 bp ATGCGCCTCAGCTGCGGGCGGAGACAACCCGGCGGGTaGGCAGCACCGCGGAGGAGCATCCCTGACGCCCGC +
Preference number: 3 (lower is better)
Translates to: MRLSCGRRQPGG*AAPRRSIPDAR
Trigger: GCGGGCGTCAGGGATGCTCCTCCGCGGTGCTGCTCACCCGCCGGGTTGTCTCCGCCCGCAGCTGAGGCGCAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR TCA 72 bp CTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTaGCCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCG +
Preference number: 3 (lower is better)
Translates to: LPARAGPAVWVL*PSGGGGRAREA
Trigger: CGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR CCA 72 bp TCTCGGCGTCCGGGGTGGGCAGCGGCAGGATCGGGATaGGGCTCTCCATGCGGCTGTCCTGGGTCAGTTTGC +
Preference number: 3 (lower is better)
Translates to: SRRPGWAAAGSG*GSPCGCPGSVC
Trigger: GCAAACTGACCCAGGACAGCCGCATGGAGAGCCCCATCCCGATCCTGCCGCTGCCCACCCCGGACGCCGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR-3UTR CAA 90 bp GGTGGGAACATCGGGAGGCCTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTAGCAGGGCCTGCGGTTaGGGTGCTGTGACCGTCCGG +
Preference number: 3 (lower is better)
Translates to: GGNIGRPRLRIPAHHSGASRACG*GAVTVR
Trigger: CCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCT...AGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAGGCCTCCCGATGTTCCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CAA 90 bp CTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGGGGAGAAGAGGCCTCGAGAGCAGGGCCTGCGGTTaGGGTGCTGTGACCGTCCGG +
Preference number: 3 (lower is better)
Translates to: LGSGSRHTTAVLGRRGLESRACG*GAVTVR
Trigger: CCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCT...CTCGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR CCA 72 bp GCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTaGGTGACCCGCGGGAGCAGGCAAAGGAGGGCTCCC +
Preference number: 3 (lower is better)
Translates to: ARLDRKWGLSTR*VTRGSRQRRAP
Trigger: GGGAGCCCTCCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR CCA 72 bp GGGATAAGGGAAGACTCGGCCCGCCTCGACAGAAAATaGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGC +
Preference number: 3 (lower is better)
Translates to: GIREDSARLDRK*GLSTRWVTRGS
Trigger: GCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTCTTCCCTTATCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CAA 90 bp GACTCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCCTCTTCTGCCTAGCTTaGCCTGCCTGCCAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: DSARLDRKWGLSTRWVTRLFCLA*PACQSR
Trigger: CCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAG...GCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR GCA 72 bp GAGCGTCACTGGTCCTGCATCTGCTGCTTCATCCTCTaGAGCATCTCCTGCATGCGCCTCAGCTGCGGGCGG +
Preference number: 3 (lower is better)
Translates to: ERHWSCICCFIL*SISCMRLSCGR
Trigger: CCGCCCGCAGCTGAGGCGCATGCAGGAGATGCTGCAGAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR GCA 72 bp TGGAGAAGGGGTGTAAGCGGTCACGACCCCGCTCCTTaGAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCC +
Preference number: 3 (lower is better)
Translates to: WRRGVSGHDPAP*SLWPPYVWRAP
Trigger: GGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR TCA 72 bp AGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCATTTaGTTCAGCCCAACCCTGCCCGCTAGGCGTCTGGGG +
Preference number: 3 (lower is better)
Translates to: SLWPPYVWRAPI*FSPTLPARRLG
Trigger: CCCCAGACGCCTAGCGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR GCA 72 bp TGTGTCCGCGGCGAGCGTCACTGGTCCTGCATCTGCTaGTTCATCCTCTGCAGCATCTCCTGCATGCGCCTC +
Preference number: 3 (lower is better)
Translates to: CVRGERHWSCIC*FILCSISCMRL
Trigger: GAGGCGCATGCAGGAGATGCTGCAGAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCGGACACA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
3UTR GCA 72 bp GCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTaGCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGC +
Preference number: 3 (lower is better)
Translates to: AGNRPRILGILF*LALPACQSRAC
Trigger: GCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR CCA 72 bp GGCAGGATCGGGATGGGGCTCTCCATGCGGCTGTCCTaGGTCAGTTTGCTGGTCATCTGCTGGATGCAGTGC +
Preference number: 3 (lower is better)
Translates to: GRIGMGLSMRLS*VSLLVICWMQC
Trigger: GCACTGCATCCAGCAGATGACCAGCAAACTGACCCAGGACAGCCGCATGGAGAGCCCCATCCCGATCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR-3UTR CAA 90 bp CGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCTCACGACCCCGCTCCTaGCAGCCTCTGGCCTCCTTA +
Preference number: 3 (lower is better)
Translates to: RKKTEHRVAGRDHAGGNISRPRS*QPLASL
Trigger: TAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGA...GATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR GCA 72 bp GGCTGTCCTGGGTCAGTTTGCTGGTCATCTGCTGGATaGAGTGCGCGCGGTAGTTCTCGTAGTGCACGTCGC +
Preference number: 3 (lower is better)
Translates to: GCPGSVCWSSAG*SARGSSRSARR
Trigger: GCGACGTGCACTACGAGAACTACCGCGCGCACTGCATCCAGCAGATGACCAGCAAACTGACCCAGGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR-3UTR CAA 90 bp CGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCCTCTTCTGCCTAGCTTaGCCTGCCTGCCAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: RKKTEHRVAGRDHAGGNILFCLA*PACQSR
Trigger: CCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAG...GATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CAA 90 bp CACCAACATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAGGACGGCACCGAGAGTaGCCAGGAGGTGGCTCACCG +
Preference number: 3 (lower is better)
Translates to: HQHCSPVTRTGRGIHNGRGRHRE*PGGGSP
Trigger: CGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCC...TCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTTGGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
3UTR CCA 72 bp CGCGGCATTCACAACGGAAGAAAACGGAGCATCGTGTaGCGGGAAGGGATCATGCGGGTGGGAACATCGGGA +
Preference number: 3 (lower is better)
Translates to: RGIHNGRKRSIV*REGIMRVGTSG
Trigger: TCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAATGCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
3UTR-3UTR CAA 90 bp AGGACGCGGCATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATTCGCACGTCACGTCCTaGAGGTCGTGCATATGCGTG +
Preference number: 3 (lower is better)
Translates to: RTRHSQRKKTEHRVAGRDSHVTS*RSCICV
Trigger: CACGCATATGCACGACCTCAAGGACGTGACGTGCGA...ATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAATGCCGCGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406172.6
3UTR GCA 72 bp GAGCGTCACTGGTCCTGCATCTGCTGCTTCATCCTCTaGAGCATCTCCTGCATGCGCCTCAGTTCCTCATCC +
Preference number: 3 (lower is better)
Translates to: ERHWSCICCFIL*SISCMRLSSSS
Trigger: GGATGAGGAACTGAGGCGCATGCAGGAGATGCTGCAGAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406395.5
ENST00000438754.6
CDS-3UTR GCA 90 bp CCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTGGCTCACCGCCCAGTaGCCCGGGGGCCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PASPGREQSGLVSRGARAWLTAQ*PGGPPG
Trigger: ACCTGGAGGGCCCCCGGGGCACTGGGCGGTGAGCCA...CGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGCGGTTTGGGTGCTGTaGCCGTCCGGGGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCEAVWVL*PSGGGG
Trigger: TCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGC...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGGCGGTCCTGGGGCGCTaGCAGCGAGTCCATCGCGGC +
Preference number: 4 (lower is better)
Translates to: CGPASPGREQSGLVSRGAAVLGR*QRVHRG
Trigger: GCCGCGATGGACTCGCTGGCAGCGCCCCAGGACCGC...CGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR GCA 90 bp GGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGCGCGGCGACAGCAGCTaGTCCACCAGGCGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GPASPGREQSGLVSRGARRGDSS*STRRSW
Trigger: CCAGGACCGCCTGGTGGAGCAGCTGCTGTCGCCGCG...CCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR GCA 90 bp GAGGGCGTCCCGGAGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGCATGGCTCACCGCCCAGTaGCCCGGGGGCCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EGVPETDGVSAASVTGPAWLTAQ*PGGPPG
Trigger: ACCTGGAGGGCCCCCGGGGCACTGGGCGGTGAGCCA...TGCAGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCTCCGGGACGCCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
CDS-3UTR CCA 90 bp CCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCACTGGCCCCAAGCTGTaGCGGCGTCGCAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: PRVSGSGTVRSGVQGCEGTGPKL*RRRSPG
Trigger: GCCCGGACTGCGACGCCGCCACAGCTTGGGGCCAGT...GCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR CCA 90 bp GGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTCCACCAGGCGGTCCTaGGGCGCTGCCAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GLWPRVSGSGTVRSGVQGSTRRS*GAASES
Trigger: GGACTCGCTGGCAGCGCCCCAGGACCGCCTGGTGGA...CCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR CCA 90 bp TGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGCCGCCTCTGGGCCTaGGTCCGCGGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: CGPASPGREQSGLVSRGASRLWA*VRGDSS
Trigger: GCTGCTGTCGCCGCGGACCCAGGCCCAGAGGCGGCT...CGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR CCA 90 bp GGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGTCCTTGAGCCGCCTCTaGGCCTGGGTCCGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: GPASPGREQSGLVSRGARSLSRL*AWVRGD
Trigger: GTCGCCGCGGACCCAGGCCCAGAGGCGGCTCAAGGA...CCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR CCA 90 bp CGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACGTCAGCTGGGGGCTGTaGCCCCGCGTCTCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: RVGNSPVWCPGVRGRPGDVSWGL*PRVSGS
Trigger: CGACCCGGAGACGCGGGGCCACAGCCCCCAGCTGAC...GTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGACCGAGCCATCCCCCTaGCTGGGCGAACTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GPASPGREQSGLVSRGARTEPSP*LGELAP
Trigger: TGGGGCCAGTTCGCCCAGTCAGGGGGATGGCTCGGT...CCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR GCA 90 bp TGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGCGCGGCGACAGCAGCTaGTCCACCAGGCGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CGPASPGREQSGLVSRGARGDSS*STRRSW
Trigger: CCAGGACCGCCTGGTGGAGCAGCTGCTGTCGCCGCG...CGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR GCA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCCTGCGGTTTGGGTaGTGTGACCGTCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCEGLRFG*CDRPGA
Trigger: CGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCC...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AGGGCCTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCCTGCGGTTTGGGTaGTGTGACCGTCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: RACGLGAVTVRGRGKGKGGLRFG*CDRPGA
Trigger: CGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCC...TCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGGGACCCGCTGCCCCTTaGCCTCCACCACCGTGTTGC +
Preference number: 4 (lower is better)
Translates to: GLWPRVSGSGTVRSGVQGGPAAP*PPPPCC
Trigger: GCAACACGGTGGTGGAGGCCAAGGGGCAGCGGGTCC...CCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000383045.7
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACGGTCTCGGCGTCCGGGGTaGGCAGCGGCAGGATCGGGA +
Preference number: 4 (lower is better)
Translates to: GREQSGLVSRGARASRRRSRRPG*AAAGSG
Trigger: TCCCGATCCTGCCGCTGCCCACCCCGGACGCCGAGA...CCGTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGGCCGGGAACAGTCCGGTCTaGTGTCCAGGGGTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: GRHRELPGGGSPPSAPGAGNSPV*CPGVRG
Trigger: CCCTCGCACCCCTGGACACCAGACCGGACTGTTCCC...GGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGGGTCGGGCCGGGCTGTaGAGAAGGGGTGTAAGCGGT +
Preference number: 4 (lower is better)
Translates to: ACQSRACGLGAVTVRGRGGRAGL*RRGVSG
Trigger: ACCGCTTACACCCCTTCTCCACAGCCCGGCCCGACC...CCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGC
72% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGGCACACCACAGCGGTaGTGGGGAGAAGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GAVAPRLRVGNSPVWCPGGTPQR*WGEEAS
Trigger: CGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCC...CCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCTCCACCAGGCGGTCCTaGGGCGCTGCCAGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: AVTVRGRGKGKGGGSLKSSTRRS*GAASES
Trigger: GGACTCGCTGGCAGCGCCCCAGGACCGCCTGGTGGA...GGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438754.6
CDS-3UTR CCA 90 bp TCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGGGACCCGCTGCCCCTTaGCCTCCACCACCGTGTTGC +
Preference number: 4 (lower is better)
Translates to: SGSGTVRSGVQGCEGVPEGPAAP*PPPPCC
Trigger: GCAACACGGTGGTGGAGGCCAAGGGGCAGCGGGTCC...CTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383045.7
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCGGGAACAGTCCGGTCTaGTGTCCAGGGGTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: DRPGAGEGQGRRISEVPPGNSPV*CPGVRG
Trigger: CCCTCGCACCCCTGGACACCAGACCGGACTGTTCCC...GGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGAGAGTTGCCAGGAGGTaGCTCACCGCCCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PASPGREQSGLVSRGARARVARR*LTAQCP
Trigger: GGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCT...CGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGGCTTGTCAATGTCCTTaGGCCGCCTCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LRFGCCDRPGAGEGQGRRACQCP*AASGPG
Trigger: CCCAGGCCCAGAGGCGGCTCAAGGACATTGACAAGC...CCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438754.6
CDS-3UTR TCA 90 bp GCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGTCAGCACTCGCTGGGTaGCCCGCGGGAGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: ARAGDGTESCQEVAHRPVSALAG*PAGAGK
Trigger: TTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGA...CACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGGCCTGGAGGGCTCCCATTTaGTTCAGCCCAACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GRHRELPGGGSPPSAPGAWRAPI*FSPTLP
Trigger: GGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCA...GGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGCTAGCTTTGCCTGCCTaGCAGAGCAGGGCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: LRFGCCDRPGAGEGQGRRLALPA*QSRACG
Trigger: ACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAG...CCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGGAGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGCATCTGCTGCTTTGGCTCACCGCCCAGTaGCCCGGGGGCCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RRRTVCPRRASLVLHLLLWLTAQ*PGGPPG
Trigger: ACCTGGAGGGCCCCCGGGGCACTGGGCGGTGAGCCA...AAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
CDS-3UTR GCA 90 bp GACTCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCTGGCTCACCGCCCAGTaGCCCGGGGGCCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: DSARLDRKWGLSTRWVTRWLTAQ*PGGPPG
Trigger: ACCTGGAGGGCCCCCGGGGCACTGGGCGGTGAGCCA...GCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGACAGCGAGGGACCTTaGCGCGGCTCTGCCTTAGGC +
Preference number: 4 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCEDSEGP*RGSALG
Trigger: GCCTAAGGCAGAGCCGCGCCAAGGTCCCTCGCTGTC...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR CCA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGCGGCAGGATCGGGATaGGGCTCTCCATGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCEAAGSG*GSPCGC
Trigger: ACAGCCGCATGGAGAGCCCCATCCCGATCCTGCCGC...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGCGCGGCGAGCGTCACTaGTCCTGCATCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PASPGREQSGLVSRGARARGERH*SCICCF
Trigger: GAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCG...CGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACGGGGGAACAGTCCGGTCTaGTGTCCAGGGGTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: GREQSGLVSRGARASRRRGNSPV*CPGVRG
Trigger: CCCTCGCACCCCTGGACACCAGACCGGACTGTTCCC...CCGTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GACTCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGTCAGCTGGGGGCTGTaGCCCCGCGTCTCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: DSARLDRKWGLSTRWVTRVSWGL*PRVSGS
Trigger: CGACCCGGAGACGCGGGGCCACAGCCCCCAGCTGAC...GCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AGGCCTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGGGGAGAAGAGGCCTGCAGGCCTGTGCTCATaGTGGCCGCCGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RPRLRIPAHHSGAGEKRPAGLCS*WPPAGD
Trigger: GTCCCCCGCCGGCGGCCACCATGAGCACAGGCCTGC...AGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CCA 90 bp TGCGAGGGCGTCCCGGAGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGGTCGGGCCGGGCTGTaGAGAAGGGGTGTAAGCGGT +
Preference number: 4 (lower is better)
Translates to: CEGVPETDGVSAASVTGPGRAGL*RRGVSG
Trigger: ACCGCTTACACCCCTTCTCCACAGCCCGGCCCGACC...AGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCTCCGGGACGCCCTCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
CDS-3UTR TCA 90 bp CCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTGCTTGTCAATGTCCTTaGGCCGCCTCTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PRLRVGNSPVWCPGVRGRACQCP*AASGPG
Trigger: CCCAGGCCCAGAGGCGGCTCAAGGACATTGACAAGC...ACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR TCA 90 bp GGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACGGGGACTTCCCCAGGCCTaGCTCACCAGCCACCATGAG +
Preference number: 4 (lower is better)
Translates to: GREQSGLVSRGARASRRRGLPQA*LTSHHE
Trigger: CTCATGGTGGCTGGTGAGTCAGGCCTGGGGAAGTCC...CCGTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCAGCACTCGGTGTTGTTaGCAGCGTCCCCGAATCCCG +
Preference number: 4 (lower is better)
Translates to: PRVSGSGTVRSGVQGCEGSTRCC*QRPRIP
Trigger: CGGGATTCGGGGACGCTGTCAACAACACCGAGTGCT...GCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp ACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGGCCCTGGTCCACATAGTCGGTaGTGGGCTTCCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: TAPRVARRWLTAQCPGGPGPHSR*WASSTR
Trigger: CCGAGTGCTGGAAGCCCATCACCGACTATGTGGACC...AGGGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCCGGAAACAGACACAATaGCCTGGGAGGGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: QSRACGLGAVTVRGRGKGRKQTQ*PGRGWC
Trigger: GCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCG...GCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGAAGGGAGGCGGATCTCTaGAGTCCCGCCCAACTTCGC +
Preference number: 4 (lower is better)
Translates to: PGREQSGLVSRGARASRRREADL*SPAQLR
Trigger: GCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCT...TCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGAGGGAGGCGGATCTCTaGAGTCCCGCCCAACTTCGC +
Preference number: 4 (lower is better)
Translates to: ARAGDGTESCQEVAHRPVREADL*SPAQLR
Trigger: GCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCT...CACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGGAGGGCTCCCATTTaGTTCAGCCCAACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GLWPRVSGSGTVRSGVQGWRAPI*FSPTLP
Trigger: GGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCA...CCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CGGAGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGCATCTGCTGCTTAGACAACCCGGCGGGTaGGCAGCACCGCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RRRTVCPRRASLVLHLLLRQPGG*AAPRRS
Trigger: GCTCCTCCGCGGTGCTGCTCACCCGCCGGGTTGTCT...AAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406172.6
CDS-3UTR GCA 90 bp TCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGACTGGCCGCAGCCCATaGCCGAAGGGGGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: SPGREQSGLVSRGARASRTGRSP*PKGEMK
Trigger: CTTCATCTCCCCCTTCGGGCATGGGCTGCGGCCAGT...CCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCACTGGCCGCAGCCCATaGCCGAAGGGGGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: RFGCCDRPGAGEGQGRRITGRSP*PKGEMK
Trigger: CTTCATCTCCCCCTTCGGGCATGGGCTGCGGCCAGT...GATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCTGGGGTCGCCAGCTTaGTCTTGTACCGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PRLRVGNSPVWCPGVRGRLGSPA*SCTAGL
Trigger: CAGGCCTGCGGTACAAGAGCAAGCTGGCGACCCCAG...ACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR GCA 90 bp CGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCTGGGGTCGCCAGCTTaGTCTTGTACCGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RVSGSGTVRSGVQGCEGVLGSPA*SCTAGL
Trigger: CAGGCCTGCGGTACAAGAGCAAGCTGGCGACCCCAG...GACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR GCA 90 bp GGTGGGAACATCGGGAGGCCTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGGCCTGCGGTTTGGGTaGTGTGACCGTCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: GGNIGRPRLRIPAHHSGAGLRFG*CDRPGA
Trigger: CGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCC...AGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAGGCCTCCCGATGTTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCGATTCAGCCCAACCCTaGCCGCTAGGCGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RFGCCDRPGAGEGQGRRIDSAQP*PLGVWG
Trigger: TCCCCAGACGCCTAGCGGGCAGGGTTGGGCTGAATC...GATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGGGCGGGAAGGGATCATaGGGGTGGGAACATCGGGAG +
Preference number: 4 (lower is better)
Translates to: ARAGDGTESCQEVAHRPVGGKGS*GWEHRE
Trigger: CTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCC...CACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACAGCCATCCCCCTGACTaGGCGAACTGGCCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: RVGNSPVWCPGVRGRPGDSHPPD*ANWPQA
Trigger: AGCTTGGGGCCAGTTCGCCCAGTCAGGGGGATGGCT...GTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR CCA 90 bp CCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTAGCCATCCCCCTGACTaGGCGAACTGGCCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: PRLRVGNSPVWCPGVRGRSHPPD*ANWPQA
Trigger: AGCTTGGGGCCAGTTCGCCCAGTCAGGGGGATGGCT...ACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR CCA 90 bp CTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGCCTGGTTGGGCAGTGTaGCGAAGCCCACGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LRFGCCDRPGAGEGQGRRPGWAV*RSPRTA
Trigger: AGCAGTACGTGGGCTTCGCCACACTGCCCAACCAGG...CCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCTGCGGTGCACCTGGTTaGGCAGTGTGGCGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RVSGSGTVRSGVQGCEGVCGAPG*AVWRSP
Trigger: TGGGCTTCGCCACACTGCCCAACCAGGTGCACCGCA...GACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGACTTGCGGTGCACCTaGTTGGGCAGTGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GAVAPRLRVGNSPVWCPGDLRCT*LGSVAK
Trigger: CTTCGCCACACTGCCCAACCAGGTGCACCGCAAGTC...CCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GCCTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGACTTGCGGTGCACCTaGTTGGGCAGTGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: ACGLGAVTVRGRGKGKGGDLRCT*LGSVAK
Trigger: CTTCGCCACACTGCCCAACCAGGTGCACCGCAAGTC...GCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp ACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGGCCCTGAAACCCACATCCACTaGCCGCAGCCCATGCCCGAA +
Preference number: 4 (lower is better)
Translates to: TAPRVARRWLTAQCPGGPETHIH*PQPMPE
Trigger: TTCGGGCATGGGCTGCGGCCAGTGGATGTGGGTTTC...AGGGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AGCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTAGAGTTGCCAGGAGGTaGCTCACCGCCCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SEGRGRHRELPGGGSPPSRVARR*LTAQCP
Trigger: GGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCT...ACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGCAAAGGAGGGCTCCCAGAGTTGCCAGGAGGTaGCTCACCGCCCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: WGLSTRWVTRGSRQRRAPRVARR*LTAQCP
Trigger: GGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCT...GGGAGCCCTCCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGAAGCACTCGGTGTTGTTaGCAGCGTCCCCGAATCCCG +
Preference number: 4 (lower is better)
Translates to: PGREQSGLVSRGARASRRSTRCC*QRPRIP
Trigger: CGGGATTCGGGGACGCTGTCAACAACACCGAGTGCT...TCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGAGCACTCGGTGTTGTTaGCAGCGTCCCCGAATCCCG +
Preference number: 4 (lower is better)
Translates to: ARAGDGTESCQEVAHRPVSTRCC*QRPRIP
Trigger: CGGGATTCGGGGACGCTGTCAACAACACCGAGTGCT...CACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp TCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGGGTCCACATAGTCGGTaGTGGGCTTCCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: SGSGTVRSGVQGCEGVPEGPHSR*WASSTR
Trigger: CCGAGTGCTGGAAGCCCATCACCGACTATGTGGACC...CTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp TCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGCGCACGTCACGTCCTTaGGGTCGTGCATATGCGTGC +
Preference number: 4 (lower is better)
Translates to: SGSGTVRSGVQGCEGVPERTSRP*GRAYAC
Trigger: GCACGCATATGCACGACCTCAAGGACGTGACGTGCG...CTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGCGCACGTCACGTCCTTaGGGTCGTGCATATGCGTGC +
Preference number: 4 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCERTSRP*GRAYAC
Trigger: GCACGCATATGCACGACCTCAAGGACGTGACGTGCG...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCGGAAACAGACACAATaGCCTGGGAGGGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ARAGDGTESCQEVAHRPVRKQTQ*PGRGWC
Trigger: GCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCG...CACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGTGGAGGGCTCCCATTTaGTTCAGCCCAACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ARAGDGTESCQEVAHRPVWRAPI*FSPTLP
Trigger: GGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCA...CACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCACCTTGGCGCGGCTCTaGCTTAGGCTGCGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RVSGSGTVRSGVQGCEGVTLARL*LRLRCP
Trigger: TGGACAACGCAGCCTAAGGCAGAGCCGCGCCAAGGT...GACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR GCA 90 bp GCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGCTCTGCAGCATCTCCTaGATGCGCCTCAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: ACQSRACGLGAVTVRGRGLCSIS*MRLSSS
Trigger: TGAGGAACTGAGGCGCATGCAGGAGATGCTGCAGAG...CCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGGGGAGAAGAGGCCTCGAGTGTACCGCAGGCCTGTaGTCATGGTGGCCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: LGSGSRHTTAVLGRRGLECTAGL*SWWPPA
Trigger: CGCCGGCGGCCACCATGAGCACAGGCCTGCGGTACA...CTCGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CCA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGCCTGGTTGGGCAGTGTaGCGAAGCCCACGTACTGCT +
Preference number: 4 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCEPGWAV*RSPRTA
Trigger: AGCAGTACGTGGGCTTCGCCACACTGCCCAACCAGG...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCTGGTTGGGCAGTGTaGCGAAGCCCACGTACTGCT +
Preference number: 4 (lower is better)
Translates to: PRLRVGNSPVWCPGVRGRPGWAV*RSPRTA
Trigger: AGCAGTACGTGGGCTTCGCCACACTGCCCAACCAGG...ACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGAGGCTGTGGACCAGTGTaGACTTCCCCAGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: PGREQSGLVSRGARASRRGCGPV*TSPGLT
Trigger: AGTCAGGCCTGGGGAAGTCCACACTGGTCCACAGCC...TCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGGGCTGTGGACCAGTGTaGACTTCCCCAGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: SGSGTVRSGVQGCEGVPEGCGPV*TSPGLT
Trigger: AGTCAGGCCTGGGGAAGTCCACACTGGTCCACAGCC...CTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTGAAACCCACATCCACTaGCCGCAGCCCATGCCCGAA +
Preference number: 4 (lower is better)
Translates to: PRLRVGNSPVWCPGVRGRETHIH*PQPMPE
Trigger: TTCGGGCATGGGCTGCGGCCAGTGGATGTGGGTTTC...ACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TGCGAGGGCGTCCCGGAGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGAAACCCACATCCACTaGCCGCAGCCCATGCCCGAA +
Preference number: 4 (lower is better)
Translates to: CEGVPETDGVSAASVTGPETHIH*PQPMPE
Trigger: TTCGGGCATGGGCTGCGGCCAGTGGATGTGGGTTTC...AGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCTCCGGGACGCCCTCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
CDS-3UTR CCA 90 bp GGCGTCCCGGAGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGCATCTCGCGGCGAGCGTCACTaGTCCTGCATCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GVPETDGVSAASVTGPASRGERH*SCICCF
Trigger: GAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCG...AGATGCAGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCTCCGGGACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
CDS-3UTR CCA 90 bp TGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGCAAAGGAGGGCTCCCCGCGGCGAGCGTCACTaGTCCTGCATCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: WGLSTRWVTRGSRQRRAPRGERH*SCICCF
Trigger: GAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCG...GGGAGCCCTCCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGGGCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTGGGAACAGTCCGGTCTaGTGTCCAGGGGTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: GAGEGQGRRISEVPPNFAGNSPV*CPGVRG
Trigger: CCCTCGCACCCCTGGACACCAGACCGGACTGTTCCC...AGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCGTCAGCTGGGGGCTGTaGCCCCGCGTCTCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: EGQGRRISEVPPNFAPDPVSWGL*PRVSGS
Trigger: CGACCCGGAGACGCGGGGCCACAGCCCCCAGCTGAC...GGGATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AGGCCTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGGGGAGAAGAGGCCTGGTCTCAGCACTCGCTaGGTGACCCGCGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPRLRIPAHHSGAGEKRPGLSTR*VTRGSR
Trigger: CCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACC...AGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp ACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGGCCCTCCAGGCGCCTCGACAGAAAATaGGGTCTCAGCACTCGCTGG +
Preference number: 4 (lower is better)
Translates to: TESCQEVAHRPVPRGPSRRLDRK*GLSTRW
Trigger: CCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCG...CCTGGAGGGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCAAACGGAGCATCGTGTaGCGGGAAGGGATCATGCGG +
Preference number: 4 (lower is better)
Translates to: PRVSGSGTVRSGVQGCEGKRSIV*REGIMR
Trigger: CCGCATGATCCCTTCCCGCCACACGATGCTCCGTTT...GCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCAGCACTCGGTGTTGTTaGCAGCGTCCCCGAATCCCG +
Preference number: 4 (lower is better)
Translates to: AVTVRGRGKGKGGGSLKSSTRCC*QRPRIP
Trigger: CGGGATTCGGGGACGCTGTCAACAACACCGAGTGCT...GGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGGCCCTCCATGCAATGCCTTCATaGAACCCACATCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: RHRELPGGGSPPSAPGALHAMPS*NPHPLA
Trigger: GGCCAGTGGATGTGGGTTTCATGAAGGCATTGCATG...GAGGGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGGCATATGCGTGCGGATaGGCATGTTGCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GLWPRVSGSGTVRSGVQGAYACG*ACCAAS
Trigger: TGAAGCTGCGCAACATGCTCATCCGCACGCATATGC...CCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCGCATATGCGTGCGGATaGGCATGTTGCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: DRPGAGEGQGRRISEVPPAYACG*ACCAAS
Trigger: TGAAGCTGCGCAACATGCTCATCCGCACGCATATGC...GGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCCCAAGGTCAGAGAGGGGCGGTTTGGGTGCTGTaGCCGTCCGGGGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: GSLKSRPTSLLIPQGQRGAVWVL*PSGGGG
Trigger: TCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGC...CCCTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGGGCTCTGCCTTAGGCTaGGTTGTCCACCCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: SGSGTVRSGVQGCEGVPEGSALG*VVHPVL
Trigger: CAAAACGGGGTGGACAACGCAGCCTAAGGCAGAGCC...CTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR GCA 90 bp TCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGTTCACCGACTTGCGGTaGACCTGGTTGGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SPGREQSGLVSRGARASRFTDLR*TWLGSV
Trigger: CACACTGCCCAACCAGGTGCACCGCAAGTCGGTGAA...CCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCTTCACCGACTTGCGGTaGACCTGGTTGGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: RFGCCDRPGAGEGQGRRIFTDLR*TWLGSV
Trigger: CACACTGCCCAACCAGGTGCACCGCAAGTCGGTGAA...GATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGCTTTCTTCACCGACTTaGGGTGCACCTGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLWPRVSGSGTVRSGVQGLSSPT*GAPGWA
Trigger: TGCCCAACCAGGTGCACCGCAAGTCGGTGAAGAAAG...CCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTTCACGAAGTCGCAATaGGCCTGGTTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GLWPRVSGSGTVRSGVQGFTKSQ*AWFSTS
Trigger: GGAGGTGGAGAACCAGGCGCATTGCGACTTCGTGAA...CCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000455784.7
CDS-3UTR GCA 90 bp CCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCACGTCCTTGAGGTCGTaGATATGCGTGCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: PRVSGSGTVRSGVQGCEGTSLRS*ICVRMS
Trigger: GCTCATCCGCACGCATATGCACGACCTCAAGGACGT...GCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCTGGTCATCTGCTGGATaGAGTGCGCGCGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: DRPGAGEGQGRRISEVPPWSSAG*SARGSS
Trigger: AGAACTACCGCGCGCACTGCATCCAGCAGATGACCA...GGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACAGTTTGCTGGTCATCTaGTGGATGCAGTGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: RVGNSPVWCPGVRGRPGDSLLVI*WMQCAR
Trigger: CCGCGCGCACTGCATCCAGCAGATGACCAGCAAACT...GTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGTTTGCTGGTCATCTaGTGGATGCAGTGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: CGPASPGREQSGLVSRGASLLVI*WMQCAR
Trigger: CCGCGCGCACTGCATCCAGCAGATGACCAGCAAACT...CGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGGCAGCATCTCCTGCATaGGCCTCAGTTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: PASPGREQSGLVSRGARAAASPA*ASVPHP
Trigger: AGGATGAGGAACTGAGGCGCATGCAGGAGATGCTGC...CGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383045.7
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGAGCGTCACTGGTCCTaGATCTGCTGCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: GAVAPRLRVGNSPVWCPGERHWS*ICCFIL
Trigger: GAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTC...CCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGGCCTGCGGTTTGGGTaGTGTGACCGTCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: VSGHDPAPCSLWPPYVWRGLRFG*CDRPGA
Trigger: CGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCC...CCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGGCCCTCAGAATCTCTACCGTCTaGCTGATGCGCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RHRELPGGGSPPSAPGALRISTV*LMRSSA
Trigger: TGCTGAGGAGCGCATCAGCCAGACGGTAGAGATTCT...GAGGGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGGCCCTCGCTTCCGGATCTCACTaGGGACAAGACAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: RHRELPGGGSPPSAPGALASGSH*GQDSQL
Trigger: AAGCTGACTGTCTTGTCCCCAGTGAGATCCGGAAGC...GAGGGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TGGAGAAGGGGTGTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTGGACCCGCTGCCCCTTaGCCTCCACCACCGTGTTGC +
Preference number: 4 (lower is better)
Translates to: WRRGVSGHDPAPCSLWPPGPAAP*PPPPCC
Trigger: GCAACACGGTGGTGGAGGCCAAGGGGCAGCGGGTCC...AGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTTCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGTCCTGCTTGTCCTCTaGGGTCGCCAGCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LWPRVSGSGTVRSGVQGCVLLVL*GRQLAL
Trigger: AAGAGCAAGCTGGCGACCCCAGAGGACAAGCAGGAC...GCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CCA 90 bp CGAGCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTCCTGCTTGTCCTCTaGGGTCGCCAGCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RARAGDGTESCQEVAHRPVLLVL*GRQLAL
Trigger: AAGAGCAAGCTGGCGACCCCAGAGGACAAGCAGGAC...TGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CCA 90 bp GCCTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCACAGACACAATGACCTaGGAGGGGGTGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ACGLGAVTVRGRGKGKGGTDTMT*EGVVLR
Trigger: TCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGT...GCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GGAAGACTCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACACCGAGCCATCCCCCTaGCTGGGCGAACTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GRLGPPRQKMGSQHSLGDTEPSP*LGELAP
Trigger: TGGGGCCAGTTCGCCCAGTCAGGGGGATGGCTCGGT...GTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000438754.6
CDS-3UTR TCA 90 bp GGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGCATGCAATGCCTTCATaGAACCCACATCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: GPASPGREQSGLVSRGARHAMPS*NPHPLA
Trigger: GGCCAGTGGATGTGGGTTTCATGAAGGCATTGCATG...CCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCGCATATGCGTGCGGATaGGCATGTTGCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RVSGSGTVRSGVQGCEGVAYACG*ACCAAS
Trigger: TGAAGCTGCGCAACATGCTCATCCGCACGCATATGC...GACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp TCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGCGGAAACAGACACAATaGCCTGGGAGGGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SARLDRKWGLSTRWVTRGRKQTQ*PGRGWC
Trigger: GCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCG...CCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AGCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGGCTCTGCCTTAGGCTaGGTTGTCCACCCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: SEGRGRHRELPGGGSPPSGSALG*VVHPVL
Trigger: CAAAACGGGGTGGACAACGCAGCCTAAGGCAGAGCC...ACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438754.6
CDS-3UTR GCA 90 bp GGGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGCGAAGCCCACGTACTaGTTGTCAATGTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GAVAPRLRVGNSPVWCPGAKPTY*LSMSLS
Trigger: GCTCAAGGACATTGACAAGCAGTACGTGGGCTTCGC...CCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR GCA 90 bp GACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCGCGAAGCCCACGTACTaGTTGTCAATGTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: DRPGAGEGQGRRISEVPPAKPTY*LSMSLS
Trigger: GCTCAAGGACATTGACAAGCAGTACGTGGGCTTCGC...GGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438754.6
CDS-3UTR GCA 90 bp GCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCTTCACCGACTTGCGGTaGACCTGGTTGGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: AVTVRGRGKGKGGGSLKSFTDLR*TWLGSV
Trigger: CACACTGCCCAACCAGGTGCACCGCAAGTCGGTGAA...GGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACTTTCTTCACCGACTTaGGGTGCACCTGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PGREQSGLVSRGARASRRLSSPT*GAPGWA
Trigger: TGCCCAACCAGGTGCACCGCAAGTCGGTGAAGAAAG...TCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTTCAGTTCCCGGTCCTaGTGCTTGAAGTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: PASPGREQSGLVSRGARAFSSRS*CLKSSS
Trigger: GGATGAGGACTTCAAGCAGCAGGACCGGGAACTGAA...CGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGACGTCCTTGAGGTCGTaGATATGCGTGCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCETSLRS*ICVRMS
Trigger: GCTCATCCGCACGCATATGCACGACCTCAAGGACGT...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGAACGTCCTTGAGGTCGTaGATATGCGTGCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: PGREQSGLVSRGARASRRTSLRS*ICVRMS
Trigger: GCTCATCCGCACGCATATGCACGACCTCAAGGACGT...TCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCTGGTCATCTGCTGGATaGAGTGCGCGCGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: RVSGSGTVRSGVQGCEGVWSSAG*SARGSS
Trigger: AGAACTACCGCGCGCACTGCATCCAGCAGATGACCA...GACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGTGTCCTGGGTCAGTTTaGTGGTCATCTGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: GPASPGREQSGLVSRGARCPGSV*WSSAGC
Trigger: GCATCCAGCAGATGACCAGCAAACTGACCCAGGACA...CCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGTGTCCTGGGTCAGTTTaGTGGTCATCTGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: GAVAPRLRVGNSPVWCPGCPGSV*WSSAGC
Trigger: GCATCCAGCAGATGACCAGCAAACTGACCCAGGACA...CCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTGCAGCATCTCCTGCATaGGCCTCAGTTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: PRLRVGNSPVWCPGVRGRAASPA*ASVPHP
Trigger: AGGATGAGGAACTGAGGCGCATGCAGGAGATGCTGC...ACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383045.7
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACCTCTGCAGCATCTCCTaGATGCGCCTCAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RVGNSPVWCPGVRGRPGDLCSIS*MRLSSS
Trigger: TGAGGAACTGAGGCGCATGCAGGAGATGCTGCAGAG...GTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383045.7
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACTCTGCAGCATCTCCTaGATGCGCCTCAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PGREQSGLVSRGARASRRLCSIS*MRLSSS
Trigger: TGAGGAACTGAGGCGCATGCAGGAGATGCTGCAGAG...TCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383045.7
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGTGCTTGTCAATGTCCTaGTTGTCCTCTGGGGTCGCC +
Preference number: 4 (lower is better)
Translates to: SPGREQSGLVSRGARASRCLSMS*LSSGVA
Trigger: GGCGACCCCAGAGGACAAGCAGGACATTGACAAGCA...CCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR GCA 90 bp ACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGGCCCTCCAGGGCGAAGCCCACGTACTaGTTGTCAATGTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TESCQEVAHRPVPRGPSRAKPTY*LSMSCL
Trigger: CAAGCAGGACATTGACAAGCAGTACGTGGGCTTCGC...CCTGGAGGGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR GCA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGCTGGGAATCCTCTTCTaGCTAGCTTTGCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCELGILF*LALPAC
Trigger: GCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAG...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCCTGGGAATCCTCTTCTaGCTAGCTTTGCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: RFGCCDRPGAGEGQGRRILGILF*LALPAC
Trigger: GCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAG...GATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp ACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGCCTGACGGCACCGAGAGTTaGCAGGAGGTGGCTCACCGC +
Preference number: 4 (lower is better)
Translates to: TEHRVAGRDHAGGNIGRPDGTES*QEVAHR
Trigger: GCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTC...AGGCCTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGTCGACGGCACCGAGAGTTaGCAGGAGGTGGCTCACCGC +
Preference number: 4 (lower is better)
Translates to: LALPACQSRACGLGAVTVDGTES*QEVAHR
Trigger: GCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTC...GACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TGGAGAAGGGGTGTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTGGCACACCACAGCGGTaGTGGGGAGAAGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: WRRGVSGHDPAPCSLWPPGTPQR*WGEEAS
Trigger: CGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCC...AGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTTCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCCCAAGGTCAGAGAGGGCCAGCTGCATGCGCCTCAGCTaGGGGCGGAGACAACCCGGC +
Preference number: 4 (lower is better)
Translates to: SEVPPNFAPDPPRSERASCMRLS*GRRQPG
Trigger: GCCGGGTTGTCTCCGCCCGCAGCTGAGGCGCATGCA...GCTGGCCCTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGCGGGACTTCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406172.6
CDS-3UTR CCA 90 bp AAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGTCCTTGAGCCGCCTCTaGGCCTGGGTCCGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: KTEHRVAGRDHAGGNIGRSLSRL*AWVRGD
Trigger: GTCGCCGCGGACCCAGGCCCAGAGGCGGCTCAAGGA...CCTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438754.6
CDS-3UTR CCA 90 bp GGTGGGAACATCGGGAGGCCTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTTGCGGTGCACCTGGTTaGGCAGTGTGGCGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGNIGRPRLRIPAHHSGACGAPG*AVWRSP
Trigger: TGGGCTTCGCCACACTGCCCAACCAGGTGCACCGCA...AGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAGGCCTCCCGATGTTCCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCGCTTCCGGATCTCACTaGGGACAAGACAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: QSRACGLGAVTVRGRGKGASGSH*GQDSQL
Trigger: AAGCTGACTGTCTTGTCCCCAGTGAGATCCGGAAGC...GCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGAAGTCGCAATGCGCCTaGTTCTCCACCTCCACGATC +
Preference number: 4 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCEKSQCA*FSTSTI
Trigger: GATCGTGGAGGTGGAGAACCAGGCGCATTGCGACTT...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000455784.7
CDS-3UTR CCA 90 bp CTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGCCTGGGTCAGTTTGCTaGTCATCTGCTGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: LRFGCCDRPGAGEGQGRRPGSVC*SSAGCS
Trigger: ACTGCATCCAGCAGATGACCAGCAAACTGACCCAGG...CCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTTCCATGCGGCTGTCCTaGGTCAGTTTGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: PRLRVGNSPVWCPGVRGRSMRLS*VSLLVI
Trigger: GATGACCAGCAAACTGACCCAGGACAGCCGCATGGA...ACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGCGGCAGGATCGGGATaGGGCTCTCCATGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: CLALPACQSRACGLGAVTAAGSG*GSPCGC
Trigger: ACAGCCGCATGGAGAGCCCCATCCCGATCCTGCCGC...GGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp ATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGCCCGCTAGGCGTCTGGTCTCGGCGTCCGGGGTaGGCAGCGGCAGGATCGGGA +
Preference number: 4 (lower is better)
Translates to: MSGGLPFDSAQPCPLGVWSRRPG*AAAGSG
Trigger: TCCCGATCCTGCCGCTGCCCACCCCGGACGCCGAGA...CCAGACGCCTAGCGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TGGGGCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTTGCCGTCAGCTGGGGGCTGTaGCCCCGCGTCTCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: WGREQTQDPGNPLLPSFAVSWGL*PRVSGS
Trigger: CGACCCGGAGACGCGGGGCCACAGCCCCCAGCTGAC...GGCAAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGCCCGCTAGGCGTCGTCAGCTGGGGGCTGTaGCCCCGCGTCTCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: LMSGGLPFDSAQPCPLGVVSWGL*PRVSGS
Trigger: CGACCCGGAGACGCGGGGCCACAGCCCCCAGCTGAC...GACGCCTAGCGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGACAGACACAATGACCTaGGAGGGGGTGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCETDTMT*EGVVLR
Trigger: TCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGT...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGCAAAGGAGGGGTCTCAGCACTCGCTaGGTGACCCGCGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RKWGLSTRWVTRGSRQRRGLSTR*VTRGSR
Trigger: CCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACC...CCTCCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGCAAAGGAGGGCTCCCCGCCTCGACAGAAAATaGGGTCTCAGCACTCGCTGG +
Preference number: 4 (lower is better)
Translates to: WGLSTRWVTRGSRQRRAPRLDRK*GLSTRW
Trigger: CCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCG...GGGAGCCCTCCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGAAGTCGCAATGCGCCTaGTTCTCCACTTCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: GPASPGREQSGLVSRGARKSQCA*FSTSVP
Trigger: GGGAACTGAAGTGGAGAACCAGGCGCATTGCGACTT...CCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406172.6
CDS-3UTR TCA 90 bp GCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGGTCCACATAGTCGGTaGTGGGCTTCCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: AGEGQGRRISEVPPNFAPGPHSR*WASSTR
Trigger: CCGAGTGCTGGAAGCCCATCACCGACTATGTGGACC...AGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGCATGCAATGCCTTCATaGAACCCACATCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCEHAMPS*NPHPLA
Trigger: GGCCAGTGGATGTGGGTTTCATGAAGGCATTGCATG...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGCGCACGTCACGTCCTTaGGGTCGTGCATATGCGTGC +
Preference number: 4 (lower is better)
Translates to: PPRQKMGSQHSLGDPREQRTSRP*GRAYAC
Trigger: GCACGCATATGCACGACCTCAAGGACGTGACGTGCG...CTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GACTCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGCCCAACTTCGCTCCTaGTCCCCCAAGGTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: DSARLDRKWGLSTRWVTRAQLRS*SPKVRE
Trigger: CTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGC...GCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGTCAGGGAGGCGGATCTCTaGAGTCCCGCCCAACTTCGC +
Preference number: 4 (lower is better)
Translates to: LALPACQSRACGLGAVTVREADL*SPAQLR
Trigger: GCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCT...GACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATTCAGCACTCGCTGGGTaGCCCGCGGGAGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: GEGQGRRISEVPPNFAPDSALAG*PAGAGK
Trigger: TTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGA...ATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACGGTTCAGTTCCCGGTCCTaGTGCTTGAAGTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: GREQSGLVSRGARASRRRFSSRS*CLKSSS
Trigger: GGATGAGGACTTCAAGCAGCAGGACCGGGAACTGAA...CCGTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCTTCAGTTCCCGGTCCTaGTGCTTGAAGTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: RFGCCDRPGAGEGQGRRIFSSRS*CLKSSS
Trigger: GGATGAGGACTTCAAGCAGCAGGACCGGGAACTGAA...GATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCTGTCCTGGGTCAGTTTaGTGGTCATCTGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: RVSGSGTVRSGVQGCEGVCPGSV*WSSAGC
Trigger: GCATCCAGCAGATGACCAGCAAACTGACCCAGGACA...GACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTTGGTCCTGCATCTGCTaGTTCATCCTCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: PRLRVGNSPVWCPGVRGRWSCIC*FILCSI
Trigger: GATGCTGCAGAGGATGAAGCAGCAGATGCAGGACCA...ACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACGGTGGTCCTGCATCTGCTaGTTCATCCTCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GREQSGLVSRGARASRRRWSCIC*FILCSI
Trigger: GATGCTGCAGAGGATGAAGCAGCAGATGCAGGACCA...CCGTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGTGGTCCTGCATCTGCTaGTTCATCCTCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCEWSCIC*FILCSI
Trigger: GATGCTGCAGAGGATGAAGCAGCAGATGCAGGACCA...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGTGGTCCTGCATCTGCTaGTTCATCCTCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: CGPASPGREQSGLVSRGAWSCIC*FILCSI
Trigger: GATGCTGCAGAGGATGAAGCAGCAGATGCAGGACCA...CGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGGCGAAGCCCACGTACTaGTTGTCAATGTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SPGREQSGLVSRGARASRAKPTY*LSMSCL
Trigger: CAAGCAGGACATTGACAAGCAGTACGTGGGCTTCGC...CCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR GCA 90 bp ACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGCCTCTAGCTTTGCCTGCCTaGCAGAGCAGGGCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: TEHRVAGRDHAGGNIGRPLALPA*QSRACG
Trigger: ACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAG...AGGCCTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGGAGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGCATCTGCTGCTTCTCCCAAGTCCGTTCTaGAGCACTGGGGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: RRRTVCPRRASLVLHLLLLPSPF*STGAGN
Trigger: GTTCCCTGCCCCAGTGCTGCAGAACGGACTTGGGAG...AAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
CDS-3UTR GCA 90 bp AAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCGATTCAGCCCAACCCTaGCCGCTAGGCGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KRSRPRSLQPLASLCLEGDSAQP*PLGVWG
Trigger: TCCCCAGACGCCTAGCGGGCAGGGTTGGGCTGAATC...GCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TTCTGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGGGCACACCACAGCGGTaGTGGGGAGAAGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: FCLALPACQSRACGLGAVGTPQR*WGEEAS
Trigger: CGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCC...CACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACTGGCCCCAAGCTGTaGCGGCGTCGCAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: HNGRKRSIVWREGIMRVGTGPKL*RRRSPG
Trigger: GCCCGGACTGCGACGCCGCCACAGCTTGGGGCCAGT...TCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438754.6
CDS-3UTR CCA 90 bp AAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCTGCGGTGCACCTGGTTaGGCAGTGTGGCGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: KRSRPRSLQPLASLCLEGCGAPG*AVWRSP
Trigger: TGGGCTTCGCCACACTGCCCAACCAGGTGCACCGCA...GCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGTGGGAACATCGGGAGGCCTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGACTTGCGGTGCACCTaGTTGGGCAGTGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GGNIGRPRLRIPAHHSGADLRCT*LGSVAK
Trigger: CTTCGCCACACTGCCCAACCAGGTGCACCGCAAGTC...AGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAGGCCTCCCGATGTTCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGAGAATCTCTACCGTCTaGCTGATGCGCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SGSGTVRSGVQGCEGVPERISTV*LMRSSA
Trigger: TGCTGAGGAGCGCATCAGCCAGACGGTAGAGATTCT...CTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCGCTTCCGGATCTCACTaGGGACAAGACAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: RVSGSGTVRSGVQGCEGVASGSH*GQDSQL
Trigger: AAGCTGACTGTCTTGTCCCCAGTGAGATCCGGAAGC...GACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGCCTGGGTCAGTTTGCTaGTCATCTGCTGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: SPGREQSGLVSRGARASRPGSVC*SSAGCS
Trigger: ACTGCATCCAGCAGATGACCAGCAAACTGACCCAGG...CCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGCCCGCTAGGCGTCTCTCGGCGTCCGGGGTaGGCAGCGGCAGGATCGGGA +
Preference number: 4 (lower is better)
Translates to: LMSGGLPFDSAQPCPLGVSRRPG*AAAGSG
Trigger: TCCCGATCCTGCCGCTGCCCACCCCGGACGCCGAGA...GACGCCTAGCGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp ACTGGGGCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTTGGCAGGCCTGTGCTCATaGTGGCCGCCGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: TGAGNRPRILGILFCLALAGLCS*WPPAGD
Trigger: GTCCCCCGCCGGCGGCCACCATGAGCACAGGCCTGC...CAAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGCCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CCA 90 bp GGTCCAGGCCCCTCGGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTGAGAGGTCGGGCCGGGCTGTaGAGAAGGGGTGTAAGCGGT +
Preference number: 4 (lower is better)
Translates to: GPGPSETDTMTWEGVVLRGRAGL*RRGVSG
Trigger: ACCGCTTACACCCCTTCTCCACAGCCCGGCCCGACC...TCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCGAGGGGCCTGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCCCAAGGTCGGGCCGGGCTGTaGAGAAGGGGTGTAAGCGGT +
Preference number: 4 (lower is better)
Translates to: GKGGGSLKSRPTSLLIPQGRAGL*RRGVSG
Trigger: ACCGCTTACACCCCTTCTCCACAGCCCGGCCCGACC...TTGGGGGATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TGGAGAAGGGGTGTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTACACCACAGCGGTGCTaGGGAGAAGAGGCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: WRRGVSGHDPAPCSLWPPTPQRC*GEEASS
Trigger: GCTCGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGT...AGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCACACCACAGCGGTGCTaGGGAGAAGAGGCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: CLALPACQSRACGLGAVTTPQRC*GEEASS
Trigger: GCTCGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGT...GGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR CAA 72 bp GTGGAGAAGGGGTGTAAGCGGTCACGACCCCGCTCCTaGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VEKGCKRSRPRS*QPLASLCLEGS
Trigger: GGAGCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp AAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCAGCACTCGGTGTTGTTaGCAGCGTCCCCGAATCCCG +
Preference number: 4 (lower is better)
Translates to: KRSRPRSLQPLASLCLEGSTRCC*QRPRIP
Trigger: CGGGATTCGGGGACGCTGTCAACAACACCGAGTGCT...GCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp TCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGGCATATGCGTGCGGATaGGCATGTTGCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SARLDRKWGLSTRWVTRGAYACG*ACCAAS
Trigger: TGAAGCTGCGCAACATGCTCATCCGCACGCATATGC...CCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp AACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGCCCGGAAACAGACACAATaGCCTGGGAGGGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NGASCGGKGSCGWEHREARKQTQ*PGRGWC
Trigger: GCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCG...GGCCTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp AACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGCCGCCCAACTTCGCTCCTaGTCCCCCAAGGTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: NGASCGGKGSCGWEHREAAQLRS*SPKVRE
Trigger: CTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGC...GGCCTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp ATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGCGGTTTGGGTGCTGTaGCCGTCCGGGGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: IHNGRKRSIVWREGIMRVAVWVL*PSGGGG
Trigger: TCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGC...CACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GATCCTGGGAATCCTCTTCTGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGTCAGCACTCGCTGGGTaGCCCGCGGGAGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: DPGNPLLPSFACLPEQGLSALAG*PAGAGK
Trigger: TTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGA...CAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACTTGAGGTCGTGCATATaGGTGCGGATGAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: RVGNSPVWCPGVRGRPGDLRSCI*VRMSML
Trigger: CAACATGCTCATCCGCACGCATATGCACGACCTCAA...GTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGATTGAGGTCGTGCATATaGGTGCGGATGAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: PGREQSGLVSRGARASRRLRSCI*VRMSML
Trigger: CAACATGCTCATCCGCACGCATATGCACGACCTCAA...TCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCTGCCTAGCTTTGCCTaGCTGCCAGAGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GEGQGRRISEVPPNFAPDLPSFA*LPEQGL
Trigger: CAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAG...ATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGAAGACTCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACGATTCAGCCCAACCCTaGCCGCTAGGCGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GRLGPPRQKMGSQHSLGDDSAQP*PLGVWG
Trigger: TCCCCAGACGCCTAGCGGGCAGGGTTGGGCTGAATC...GTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGGGCACACCACAGCGGTaGTGGGGAGAAGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: KTEHRVAGRDHAGGNIGRGTPQR*WGEEAS
Trigger: CGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCC...CCTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GAGGGCGTCCCGGAGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGCATTCACGAAGTCGCAATaGGCCTGGTTCTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: EGVPETDGVSAASVTGPAFTKSQ*AWFSTS
Trigger: TGAAGTGGAGAACCAGGCGCATTGCGACTTCGTGAA...TGCAGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCTCCGGGACGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406172.6
CDS-3UTR CCA 90 bp TGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGGCTGTGGACCAGTGTaGACTTCCCCAGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: CLALPACQSRACGLGAVTGCGPV*TSPGLT
Trigger: AGTCAGGCCTGGGGAAGTCCACACTGGTCCACAGCC...GGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCGGCTGTGGACCAGTGTaGACTTCCCCAGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: KRSRPRSLQPLASLCLEGGCGPV*TSPGLT
Trigger: AGTCAGGCCTGGGGAAGTCCACACTGGTCCACAGCC...GCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCCTGGGTCAGTTTGCTaGTCATCTGCTGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: AVTVRGRGKGKGGGSLKSPGSVC*SSAGCS
Trigger: ACTGCATCCAGCAGATGACCAGCAAACTGACCCAGG...GGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CAGGACGCGGCATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGAGGTCTCAGCACTCGCTaGGTGACCCGCGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QDAAFTTEENGASCGGKGGLSTR*VTRGSR
Trigger: CCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACC...TCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAATGCCGCGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGAAGACTCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACACACCACAGCGGTGCTaGGGAGAAGAGGCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: GRLGPPRQKMGSQHSLGDTPQRC*GEEASS
Trigger: GCTCGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGT...GTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CTACGGTCCAGGCCCCTCGGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTGGTCCACATAGTCGGTaGTGGGCTTCCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: LRSRPLGNRHNDLGGGGAGPHSR*WASSTR
Trigger: CCGAGTGCTGGAAGCCCATCACCGACTATGTGGACC...AGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCGAGGGGCCTGGACCGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp GGAAGACTCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACGGTCCACATAGTCGGTaGTGGGCTTCCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: GRLGPPRQKMGSQHSLGDGPHSR*WASSTR
Trigger: CCGAGTGCTGGAAGCCCATCACCGACTATGTGGACC...GTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp TCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCCCAAGGTCAGAGAGGGCCAGCCGCACGTCACGTCCTTaGGGTCGTGCATATGCGTGC +
Preference number: 4 (lower is better)
Translates to: SEVPPNFAPDPPRSERASRTSRP*GRAYAC
Trigger: GCACGCATATGCACGACCTCAAGGACGTGACGTGCG...GCTGGCCCTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGCGGGACTTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACGGGCGGTTTGGGTGCTGTaGCCGTCCGGGGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: HCSPVTRTGRGIHNGRKRAVWVL*PSGGGG
Trigger: TCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGC...CCGTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TTCTGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCTTGGCGCGGCTCTaGCTTAGGCTGCGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: FCLALPACQSRACGLGAVTLARL*LRLRCP
Trigger: TGGACAACGCAGCCTAAGGCAGAGCCGCGCCAAGGT...CACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438754.6
CDS-3UTR GCA 90 bp CGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGCTTTCTTCACCGACTTaGGGTGCACCTGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RGKGKGGGSLKSRPTSLLLSSPT*GAPGWA
Trigger: TGCCCAACCAGGTGCACCGCAAGTCGGTGAAGAAAG...CAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACTCATCACGGAAGTACTaGTCAAACTGCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: RVGNSPVWCPGVRGRPGDSSRKY*SNCWST
Trigger: TGTGGACCAGCAGTTTGAGCAGTACTTCCGTGATGA...GTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GACTCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGAGCGTCACTGGTCCTaGATCTGCTGCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: DSARLDRKWGLSTRWVTRERHWS*ICCFIL
Trigger: GAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTC...GCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp ACTGGGGCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTTGTGTACCGCAGGCCTGTaGTCATGGTGGCCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: TGAGNRPRILGILFCLALCTAGL*SWWPPA
Trigger: CGCCGGCGGCCACCATGAGCACAGGCCTGCGGTACA...CAAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGCCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR GCA 90 bp ACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAATGTACCGCAGGCCTGTaGTCATGGTGGCCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: TTEENGASCGGKGSCGWECTAGL*SWWPPA
Trigger: CGCCGGCGGCCACCATGAGCACAGGCCTGCGGTACA...TTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR GCA 90 bp ATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGCCCGCTAGGCGTCTGGCTGCCTAGCTTTGCCTaGCTGCCAGAGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: MSGGLPFDSAQPCPLGVWLPSFA*LPEQGL
Trigger: CAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAG...CCAGACGCCTAGCGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGCTGCCTAGCTTTGCCTaGCTGCCAGAGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KTEHRVAGRDHAGGNIGRLPSFA*LPEQGL
Trigger: CAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAG...CCTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGCAAAGGAGGCTCCCAAGTCCGTTCTaGAGCACTGGGGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: RKWGLSTRWVTRGSRQRRLPSPF*STGAGN
Trigger: GTTCCCTGCCCCAGTGCTGCAGAACGGACTTGGGAG...CCTCCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGACGGCACCGAGAGTTaGCAGGAGGTGGCTCACCGC +
Preference number: 4 (lower is better)
Translates to: RKKTEHRVAGRDHAGGNIDGTES*QEVAHR
Trigger: GCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTC...GATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGACGGCACCGAGAGTTaGCAGGAGGTGGCTCACCGC +
Preference number: 4 (lower is better)
Translates to: RKRSIVWREGIMRVGTSGDGTES*QEVAHR
Trigger: GCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTC...TCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CTACGGTCCAGGCCCCTCGGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTCCTGGTTGGGCAGTGTaGCGAAGCCCACGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LRSRPLGNRHNDLGGGGAPGWAV*RSPRTA
Trigger: AGCAGTACGTGGGCTTCGCCACACTGCCCAACCAGG...AGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCGAGGGGCCTGGACCGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGCATCTGCTGCTTCATGGCTGTGGACCAGTGTaGACTTCCCCAGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: RRTVCPRRASLVLHLLLHGCGPV*TSPGLT
Trigger: AGTCAGGCCTGGGGAAGTCCACACTGGTCCACAGCC...ATGAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
CDS-3UTR CCA 90 bp TTCTGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGGAAACCCACATCCACTaGCCGCAGCCCATGCCCGAA +
Preference number: 4 (lower is better)
Translates to: FCLALPACQSRACGLGAVETHIH*PQPMPE
Trigger: TTCGGGCATGGGCTGCGGCCAGTGGATGTGGGTTTC...CACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCGAAACCCACATCCACTaGCCGCAGCCCATGCCCGAA +
Preference number: 4 (lower is better)
Translates to: EGQGRRISEVPPNFAPDPETHIH*PQPMPE
Trigger: TTCGGGCATGGGCTGCGGCCAGTGGATGTGGGTTTC...GGGATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGTCACACTCAGGGAACTaGTATACATGGATCCCAAAC +
Preference number: 4 (lower is better)
Translates to: GPASPGREQSGLVSRGARSHSGN*YTWIPN
Trigger: GTTTGGGATCCATGTATACCAGTTCCCTGAGTGTGA...CCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGGACCCGCTGCCCCTTaGCCTCCACCACCGTGTTGC +
Preference number: 4 (lower is better)
Translates to: QPLASLCLEGSHLIQPNPGPAAP*PPPPCC
Trigger: GCAACACGGTGGTGGAGGCCAAGGGGCAGCGGGTCC...AGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGTGGGAACATCGGGAGGCCTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTTCCATGCGGCTGTCCTaGGTCAGTTTGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: GGNIGRPRLRIPAHHSGASMRLS*VSLLVI
Trigger: GATGACCAGCAAACTGACCCAGGACAGCCGCATGGA...AGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAGGCCTCCCGATGTTCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGCGGCAGGATCGGGATaGGGCTCTCCATGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: RKRSIVWREGIMRVGTSGAAGSG*GSPCGC
Trigger: ACAGCCGCATGGAGAGCCCCATCCCGATCCTGCCGC...TCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GATCCTGGGAATCCTCTTCTGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGCGGCGAGCGTCACTaGTCCTGCATCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: DPGNPLLPSFACLPEQGLRGERH*SCICCF
Trigger: GAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCG...CAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAACAGTCCGGTCTaGTGTCCAGGGGTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: RKKTEHRVAGRDHAGGNIGNSPV*CPGVRG
Trigger: CCCTCGCACCCCTGGACACCAGACCGGACTGTTCCC...GATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGTGGGAACATCGGGAGGCCTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTACAGACACAATGACCTaGGAGGGGGTGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GGNIGRPRLRIPAHHSGATDTMT*EGVVLR
Trigger: TCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGT...AGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAGGCCTCCCGATGTTCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp ACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGCCTCGCCTCGACAGAAAATaGGGTCTCAGCACTCGCTGG +
Preference number: 4 (lower is better)
Translates to: TEHRVAGRDHAGGNIGRPRLDRK*GLSTRW
Trigger: CCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCG...AGGCCTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TGGAGAAGGGGTGTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTAAACGGAGCATCGTGTaGCGGGAAGGGATCATGCGG +
Preference number: 4 (lower is better)
Translates to: WRRGVSGHDPAPCSLWPPKRSIV*REGIMR
Trigger: CCGCATGATCCCTTCCCGCCACACGATGCTCCGTTT...AGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGTCGCATATGCGTGCGGATaGGCATGTTGCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LALPACQSRACGLGAVTVAYACG*ACCAAS
Trigger: TGAAGCTGCGCAACATGCTCATCCGCACGCATATGC...GACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACTGGCCGCAGCCCATaGCCGAAGGGGGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: HNGRKRSIVWREGIMRVGTGRSP*PKGEMK
Trigger: CTTCATCTCCCCCTTCGGGCATGGGCTGCGGCCAGT...TCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGAGACCTTCTCATGCAATaGCTTCATGAAACCCACATC +
Preference number: 4 (lower is better)
Translates to: PGREQSGLVSRGARASRRDLLMQ*LHETHI
Trigger: GATGTGGGTTTCATGAAGGCATTGCATGAGAAGGTC...TCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGATGTTGACCTTCTCATaGAATGCCTTCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: GPASPGREQSGLVSRGARMLTFS*NAFMKP
Trigger: GGGTTTCATGAAGGCATTGCATGAGAAGGTCAACAT...CCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCAACGTCCTTGAGGTCGTaGATATGCGTGCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: VTTPLLAASGLLMSGGLPTSLRS*ICVRMS
Trigger: GCTCATCCGCACGCATATGCACGACCTCAAGGACGT...TGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CTACGGTCCAGGCCCCTCGGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTAGTTTGCTGGTCATCTaGTGGATGCAGTGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: LRSRPLGNRHNDLGGGGASLLVI*WMQCAR
Trigger: CCGCGCGCACTGCATCCAGCAGATGACCAGCAAACT...AGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCGAGGGGCCTGGACCGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AGGCCTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGGGGAGAAGAGGCCTTGTCCTGGGTCAGTTTaGTGGTCATCTGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: RPRLRIPAHHSGAGEKRPCPGSV*WSSAGC
Trigger: GCATCCAGCAGATGACCAGCAAACTGACCCAGGACA...AGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGACTAGCTTTGCCTGCCTaGCAGAGCAGGGCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: HNGRKRSIVWREGIMRVGLALPA*QSRACG
Trigger: ACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAG...TCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGCTGCCTAGCTTTGCCTaGCTGCCAGAGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: EENGASCGGKGSCGWEHRLPSFA*LPEQGL
Trigger: CAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAG...CCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCCCAAGGTCAGAGAGGGCTCCCAAGTCCGTTCTaGAGCACTGGGGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: GSLKSRPTSLLIPQGQRGLPSPF*STGAGN
Trigger: GTTCCCTGCCCCAGTGCTGCAGAACGGACTTGGGAG...CCCTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCTGCGGTGCACCTGGTTaGGCAGTGTGGCGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RKKTEHRVAGRDHAGGNICGAPG*AVWRSP
Trigger: TGGGCTTCGCCACACTGCCCAACCAGGTGCACCGCA...GATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGGACTTGCGGTGCACCTaGTTGGGCAGTGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: KTEHRVAGRDHAGGNIGRDLRCT*LGSVAK
Trigger: CTTCGCCACACTGCCCAACCAGGTGCACCGCAAGTC...CCTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGGGGAGAAGAGGCCTCGAGAGAATCTCTACCGTCTaGCTGATGCGCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LGSGSRHTTAVLGRRGLERISTV*LMRSSA
Trigger: TGCTGAGGAGCGCATCAGCCAGACGGTAGAGATTCT...CTCGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCTCACACTCAGGGAACTaGTATACATGGATCCCAAAC +
Preference number: 4 (lower is better)
Translates to: LWPRVSGSGTVRSGVQGCSHSGN*YTWIPN
Trigger: GTTTGGGATCCATGTATACCAGTTCCCTGAGTGTGA...GCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTCCTGGGTCAGTTTGCTaGTCATCTGCTGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: AGEGQGRRISEVPPNFAPPGSVC*SSAGCS
Trigger: ACTGCATCCAGCAGATGACCAGCAAACTGACCCAGG...AGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGCCTCCATGCGGCTGTCCTaGGTCAGTTTGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: NGASCGGKGSCGWEHREASMRLS*VSLLVI
Trigger: GATGACCAGCAAACTGACCCAGGACAGCCGCATGGA...GGCCTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACGGTCTCGGCGTCCGGGGTaGGCAGCGGCAGGATCGGGA +
Preference number: 4 (lower is better)
Translates to: HCSPVTRTGRGIHNGRKRSRRPG*AAAGSG
Trigger: TCCCGATCCTGCCGCTGCCCACCCCGGACGCCGAGA...CCGTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GTAGTGCACGTCGCACGTCACGTCCTTGAGGTCGTGCATATGCGTGCGGATGAGCGCGGCGAGCGTCACTaGTCCTGCATCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VVHVARHVLEVVHMRADERGERH*SCICCF
Trigger: GAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCG...CTCATCCGCACGCATATGCACGACCTCAAGGACGTGACGTGCGACGTGCACTAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406172.6
CDS-3UTR CCA 90 bp AAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCACAGACACAATGACCTaGGAGGGGGTGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KRSRPRSLQPLASLCLEGTDTMT*EGVVLR
Trigger: TCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGT...GCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGCAAAGGAGGCGCCTCGACAGAAAATaGGGTCTCAGCACTCGCTGG +
Preference number: 4 (lower is better)
Translates to: RKWGLSTRWVTRGSRQRRRLDRK*GLSTRW
Trigger: CCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCG...CCTCCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
3UTR CAA 72 bp AGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTaGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: RPRILGILFCLA*PACQSRACGLG
Trigger: ACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CTCCTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGCCCGCTAGGCGCCCAACTTCGCTCCTaGTCCCCCAAGGTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LLMSGGLPFDSAQPCPLGAQLRS*SPKVRE
Trigger: CTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGC...GCCTAGCGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp AGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGCCCAACTTCGCTCCTaGTCCCCCAAGGTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: RKRSIVWREGIMRVGTSGAQLRS*SPKVRE
Trigger: CTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGC...TCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CTACGGTCCAGGCCCCTCGGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTCTTTCTTCACCGACTTaGGGTGCACCTGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LRSRPLGNRHNDLGGGGALSSPT*GAPGWA
Trigger: TGCCCAACCAGGTGCACCGCAAGTCGGTGAAGAAAG...AGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCGAGGGGCCTGGACCGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGAAGACTCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCTTTCTTCACCGACTTaGGGTGCACCTGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRLGPPRQKMGSQHSLGDLSSPT*GAPGWA
Trigger: TGCCCAACCAGGTGCACCGCAAGTCGGTGAAGAAAG...GTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGCAAAGGAGGGCTCCCGACCTTCTCATGCAATaGCTTCATGAAACCCACATC +
Preference number: 4 (lower is better)
Translates to: WGLSTRWVTRGSRQRRAPDLLMQ*LHETHI
Trigger: GATGTGGGTTTCATGAAGGCATTGCATGAGAAGGTC...GGGAGCCCTCCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTATGTTGACCTTCTCATaGAATGCCTTCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: PRLRVGNSPVWCPGVRGRMLTFS*NAFMKP
Trigger: GGGTTTCATGAAGGCATTGCATGAGAAGGTCAACAT...ACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCTTCAGTTCCCGGTCCTaGTGCTTGAAGTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: KRSRPRSLQPLASLCLEGFSSRS*CLKSSS
Trigger: GGATGAGGACTTCAAGCAGCAGGACCGGGAACTGAA...GCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCTGGTCATCTGCTGGATaGAGTGCGCGCGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: EGQGRRISEVPPNFAPDPWSSAG*SARGSS
Trigger: AGAACTACCGCGCGCACTGCATCCAGCAGATGACCA...GGGATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCCCAAGGTCAGAGAGGGAGTTTGCTGGTCATCTaGTGGATGCAGTGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: GSLKSRPTSLLIPQGQRGSLLVI*WMQCAR
Trigger: CCGCGCGCACTGCATCCAGCAGATGACCAGCAAACT...CCCTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCCCAAGGTCAGAGAGGGCCAGCGCAGCATCTCCTGCATaGGCCTCAGTTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SEVPPNFAPDPPRSERASAASPA*ASVPHP
Trigger: AGGATGAGGAACTGAGGCGCATGCAGGAGATGCTGC...GCTGGCCCTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGCGGGACTTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGAAGACTCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACGAGCGTCACTGGTCCTaGATCTGCTGCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: GRLGPPRQKMGSQHSLGDERHWS*ICCFIL
Trigger: GAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTC...GTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TGGAGAAGGGGTGTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTGCGAAGCCCACGTACTaGTTGTCAATGTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: WRRGVSGHDPAPCSLWPPAKPTY*LSMSCL
Trigger: CAAGCAGGACATTGACAAGCAGTACGTGGGCTTCGC...AGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR GCA 90 bp GGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCCCAACTGGGAATCCTCTTCTaGCTAGCTTTGCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GKGGGSLKSRPTSLLIPQLGILF*LALPAC
Trigger: GCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAG...TTGGGGGATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCTGGGAATCCTCTTCTaGCTAGCTTTGCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GEGQGRRISEVPPNFAPDLGILF*LALPAC
Trigger: GCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAG...ATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp ACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAAGATTCAGCCCAACCCTaGCCGCTAGGCGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TTEENGASCGGKGSCGWEDSAQP*PLGVWG
Trigger: TCCCCAGACGCCTAGCGGGCAGGGTTGGGCTGAATC...TTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AGGACGCGGCATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATGGCGGGAAGGGATCATaGGGGTGGGAACATCGGGAG +
Preference number: 4 (lower is better)
Translates to: RTRHSQRKKTEHRVAGRDGGKGS*GWEHRE
Trigger: CTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCC...ATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAATGCCGCGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GCGGCATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGCGGGAAGGGATCATaGGGGTGGGAACATCGGGAG +
Preference number: 4 (lower is better)
Translates to: AAFTTEENGASCGGKGSCGGKGS*GWEHRE
Trigger: CTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCC...GCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAATGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACACTCTGCAGCATCTCCTaGATGCGCCTCAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: NGRKRSIVWREGIMRVGTLCSIS*MRLSCG
Trigger: CCCGCAGCTGAGGCGCATGCAGGAGATGCTGCAGAG...TGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406172.6
CDS-3UTR CCA 90 bp AACATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACAGCCGCCTCTGGGCCTaGGTCCGCGGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: NIVLLSPGQDAAFTTEENSRLWA*VRGDSS
Trigger: GCTGCTGTCGCCGCGGACCCAGGCCCAGAGGCGGCT...GTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438754.6
CDS-3UTR CCA 90 bp TGGAGAAGGGGTGTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTAGAATCTCTACCGTCTaGCTGATGCGCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WRRGVSGHDPAPCSLWPPRISTV*LMRSSA
Trigger: TGCTGAGGAGCGCATCAGCCAGACGGTAGAGATTCT...AGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGCAAAGGAGGGCGCTTCCGGATCTCACTaGGGACAAGACAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: KMGSQHSLGDPREQAKEGASGSH*GQDSQL
Trigger: AAGCTGACTGTCTTGTCCCCAGTGAGATCCGGAAGC...GCCCTCCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGGGAACTGGTATACATaGATCCCAAACTTGTCAATC +
Preference number: 4 (lower is better)
Translates to: LWPRVSGSGTVRSGVQGCGNWYT*IPNLSI
Trigger: GATTGACAAGTTTGGGATCCATGTATACCAGTTCCC...GCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGGGGAACTGGTATACATaGATCCCAAACTTGTCAATC +
Preference number: 4 (lower is better)
Translates to: ARAGDGTESCQEVAHRPVGNWYT*IPNLSI
Trigger: GATTGACAAGTTTGGGATCCATGTATACCAGTTCCC...CACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCATTAAGTCGCAATGCGCCTaGTTCTCCACCTCCACGATC +
Preference number: 4 (lower is better)
Translates to: HDPAPCSLWPPYVWRAPIKSQCA*FSTSTI
Trigger: GATCGTGGAGGTGGAGAACCAGGCGCATTGCGACTT...AATGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455784.7
CDS-3UTR CCA 90 bp GGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTGAGAATAAATTAGGGTCAGCAGGCCTGTGCTCATaGTGGCCGCCGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GNRHNDLGGGGAENKLGSAGLCS*WPPAGD
Trigger: GTCCCCCGCCGGCGGCCACCATGAGCACAGGCCTGC...TGACCCTAATTTATTCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CCA 90 bp CAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTACACCACAGCGGTGCTaGGGAGAAGAGGCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: QPLASLCLEGSHLIQPNPTPQRC*GEEASS
Trigger: GCTCGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGT...AGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp ATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGCCCGCTAGGCGTCTGGAAACGGAGCATCGTGTaGCGGGAAGGGATCATGCGG +
Preference number: 4 (lower is better)
Translates to: MSGGLPFDSAQPCPLGVWKRSIV*REGIMR
Trigger: CCGCATGATCCCTTCCCGCCACACGATGCTCCGTTT...CCAGACGCCTAGCGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp ATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGAGGGAGGCGGATCTCTaGAGTCCCGCCCAACTTCGC +
Preference number: 4 (lower is better)
Translates to: IHNGRKRSIVWREGIMRVREADL*SPAQLR
Trigger: GCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCT...CACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACGGTCAGCACTCGCTGGGTaGCCCGCGGGAGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: HCSPVTRTGRGIHNGRKRSALAG*PAGAGK
Trigger: TTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGA...CCGTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGGGGAGAAGAGGCCTCGAGTCATCACGGAAGTACTaGTCAAACTGCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: LGSGSRHTTAVLGRRGLESSRKY*SNCWST
Trigger: TGTGGACCAGCAGTTTGAGCAGTACTTCCGTGATGA...CTCGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp ATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGACTGGCCGCAGCCCATaGCCGAAGGGGGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: IHNGRKRSIVWREGIMRVTGRSP*PKGEMK
Trigger: CTTCATCTCCCCCTTCGGGCATGGGCTGCGGCCAGT...CACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TCTGGCCTCCTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGCCCGAGTTTGCTGGTCATCTaGTGGATGCAGTGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: SGLLMSGGLPFDSAQPCPSLLVI*WMQCAR
Trigger: CCGCGCGCACTGCATCCAGCAGATGACCAGCAAACT...CGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAGGAGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AAGGGGTGTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTTGCTTGTCAATGTCCTaGTTGTCCTCTGGGGTCGCC +
Preference number: 4 (lower is better)
Translates to: KGCKRSRPRSLQPLASLCCLSMS*LSSGVA
Trigger: GGCGACCCCAGAGGACAAGCAGGACATTGACAAGCA...ACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR GCA 90 bp CACTGGGGCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTTCTCCCAAGTCCGTTCTaGAGCACTGGGGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: HWGREQTQDPGNPLLPSFLPSPF*STGAGN
Trigger: GTTCCCTGCCCCAGTGCTGCAGAACGGACTTGGGAG...AAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGCCCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AACAGACACAATGACCTGGGAGGGGGTGGTGCTGAGAATAAATTAGGGTCAGCTTCTCGGCGTCCGGGGTaGGCAGCGGCAGGATCGGGA +
Preference number: 4 (lower is better)
Translates to: NRHNDLGGGGAENKLGSASRRPG*AAAGSG
Trigger: TCCCGATCCTGCCGCTGCCCACCCCGGACGCCGAGA...AGCTGACCCTAATTTATTCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGCCCGCTAGGCGTCGTCCTGCTTGTCCTCTaGGGTCGCCAGCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LMSGGLPFDSAQPCPLGVVLLVL*GRQLAL
Trigger: AAGAGCAAGCTGGCGACCCCAGAGGACAAGCAGGAC...GACGCCTAGCGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CCA 90 bp CATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACGGAGAGTTGCCAGGAGGTaGCTCACCGCCCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: HCSPVTRTGRGIHNGRKRRVARR*LTAQCP
Trigger: GGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCT...CCGTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAAAACGGAGCATCGTGTaGCGGGAAGGGATCATGCGG +
Preference number: 4 (lower is better)
Translates to: RKRSIVWREGIMRVGTSGKRSIV*REGIMR
Trigger: CCGCATGATCCCTTCCCGCCACACGATGCTCCGTTT...TCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGTCTCATCACGGAAGTACTaGTCAAACTGCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: LALPACQSRACGLGAVTVSSRKY*SNCWST
Trigger: TGTGGACCAGCAGTTTGAGCAGTACTTCCGTGATGA...GACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CTACGGTCCAGGCCCCTCGGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTTTGAGGTCGTGCATATaGGTGCGGATGAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: LRSRPLGNRHNDLGGGGALRSCI*VRMSML
Trigger: CAACATGCTCATCCGCACGCATATGCACGACCTCAA...AGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCGAGGGGCCTGGACCGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGCAGCATCTCCTGCATaGGCCTCAGTTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RKRSIVWREGIMRVGTSGAASPA*ASVPHP
Trigger: AGGATGAGGAACTGAGGCGCATGCAGGAGATGCTGC...TCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGACTCTGCAGCATCTCCTaGATGCGCCTCAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: HNGRKRSIVWREGIMRVGLCSIS*MRLSSS
Trigger: TGAGGAACTGAGGCGCATGCAGGAGATGCTGCAGAG...TCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAGAGCGTCACTGGTCCTaGATCTGCTGCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: HNGRKRSIVWREGIMRVGERHWS*ICCFIL
Trigger: GAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTC...TCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CAGGACGCGGCATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGAGAGCGTCACTGGTCCTaGATCTGCTGCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: QDAAFTTEENGASCGGKGERHWS*ICCFIL
Trigger: GAGGATGAAGCAGCAGATGCAGGACCAGTGACGCTC...TCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAATGCCGCGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TGGGGCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTTGCCTGCTTGTCAATGTCCTaGTTGTCCTCTGGGGTCGCC +
Preference number: 4 (lower is better)
Translates to: WGREQTQDPGNPLLPSFACLSMS*LSSGVA
Trigger: GGCGACCCCAGAGGACAAGCAGGACATTGACAAGCA...GGCAAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CCA 90 bp GGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCCCAAGGTCAGAGAGGGCCTGGGTCAGTTTGCTaGTCATCTGCTGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: GSLKSRPTSLLIPQGQRGPGSVC*SSAGCS
Trigger: ACTGCATCCAGCAGATGACCAGCAAACTGACCCAGG...CCCTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp GGACAGGACGCGGCATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGTCCATGCGGCTGTCCTaGGTCAGTTTGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: GQDAAFTTEENGASCGGKSMRLS*VSLLVI
Trigger: GATGACCAGCAAACTGACCCAGGACAGCCGCATGGA...CTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TTCACCAACATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGCGGCAGGATCGGGATaGGGCTCTCCATGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: FTNIVLLSPGQDAAFTTEAAGSG*GSPCGC
Trigger: ACAGCCGCATGGAGAGCCCCATCCCGATCCTGCCGC...TTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTTGGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp TGGGGCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTTGCCCATGCAATGCCTTCATaGAACCCACATCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: WGREQTQDPGNPLLPSFAHAMPS*NPHPLA
Trigger: GGCCAGTGGATGTGGGTTTCATGAAGGCATTGCATG...GGCAAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGCCCGCTAGGCGTCCATGCAATGCCTTCATaGAACCCACATCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: LMSGGLPFDSAQPCPLGVHAMPS*NPHPLA
Trigger: GGCCAGTGGATGTGGGTTTCATGAAGGCATTGCATG...GACGCCTAGCGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CACCAACATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGACGCACGTCACGTCCTTaGGGTCGTGCATATGCGTGC +
Preference number: 4 (lower is better)
Translates to: HQHCSPVTRTGRGIHNGRRTSRP*GRAYAC
Trigger: GCACGCATATGCACGACCTCAAGGACGTGACGTGCG...TCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGTCCAGGCCCCTCGGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTGAGATCATCACGGAAGTACTaGTCAAACTGCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: GPGPSETDTMTWEGVVLRSSRKY*SNCWST
Trigger: TGTGGACCAGCAGTTTGAGCAGTACTTCCGTGATGA...TCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCGAGGGGCCTGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGACCTTCTCATGCAATaGCTTCATGAAACCCACATC +
Preference number: 4 (lower is better)
Translates to: CLALPACQSRACGLGAVTDLLMQ*LHETHI
Trigger: GATGTGGGTTTCATGAAGGCATTGCATGAGAAGGTC...GGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATTCACGAAGTCGCAATaGGCCTGGTTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: NGRKRSIVWREGIMRVGTFTKSQ*AWFSTS
Trigger: GGAGGTGGAGAACCAGGCGCATTGCGACTTCGTGAA...TGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455784.7
CDS-3UTR GCA 90 bp CAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTACGTCCTTGAGGTCGTaGATATGCGTGCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: QPLASLCLEGSHLIQPNPTSLRS*ICVRMS
Trigger: GCTCATCCGCACGCATATGCACGACCTCAAGGACGT...AGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp ACTGGGGCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTTGTGGTCATCTGCTGGATaGAGTGCGCGCGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: TGAGNRPRILGILFCLALWSSAG*SARGSS
Trigger: AGAACTACCGCGCGCACTGCATCCAGCAGATGACCA...CAAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCTGTCCTGGGTCAGTTTaGTGGTCATCTGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: RKKTEHRVAGRDHAGGNICPGSV*WSSAGC
Trigger: GCATCCAGCAGATGACCAGCAAACTGACCCAGGACA...GATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGCCCGCTAGGCGTCTGGTCCTGCATCTGCTaGTTCATCCTCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: LMSGGLPFDSAQPCPLGVWSCIC*FILCSI
Trigger: GATGCTGCAGAGGATGAAGCAGCAGATGCAGGACCA...GACGCCTAGCGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CTCGGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTGAGAATAAATTAGGGTGCGGTGCACCTGGTTaGGCAGTGTGGCGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LGNRHNDLGGGGAENKLGCGAPG*AVWRSP
Trigger: TGGGCTTCGCCACACTGCCCAACCAGGTGCACCGCA...CCCTAATTTATTCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACGGGACTTGCGGTGCACCTaGTTGGGCAGTGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: HCSPVTRTGRGIHNGRKRDLRCT*LGSVAK
Trigger: CTTCGCCACACTGCCCAACCAGGTGCACCGCAAGTC...CCGTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAGCTTCCGGATCTCACTaGGGACAAGACAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HNGRKRSIVWREGIMRVGASGSH*GQDSQL
Trigger: AAGCTGACTGTCTTGTCCCCAGTGAGATCCGGAAGC...TCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGTCTCACACTCAGGGAACTaGTATACATGGATCCCAAAC +
Preference number: 4 (lower is better)
Translates to: LALPACQSRACGLGAVTVSHSGN*YTWIPN
Trigger: GTTTGGGATCCATGTATACCAGTTCCCTGAGTGTGA...GACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp AGGACGCGGCATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATTCCATGCGGCTGTCCTaGGTCAGTTTGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: RTRHSQRKKTEHRVAGRDSMRLS*VSLLVI
Trigger: GATGACCAGCAAACTGACCCAGGACAGCCGCATGGA...ATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAATGCCGCGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR TCA 90 bp CTCGGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTGAGAATAAATTAGGGTGGAGGGCTCCCATTTaGTTCAGCCCAACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LGNRHNDLGGGGAENKLGWRAPI*FSPTLP
Trigger: GGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCA...CCCTAATTTATTCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACGGTTCACCGACTTGCGGTaGACCTGGTTGGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: HCSPVTRTGRGIHNGRKRFTDLR*TWLGSV
Trigger: CACACTGCCCAACCAGGTGCACCGCAAGTCGGTGAA...CCGTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGATTGAGGTCGTGCATATaGGTGCGGATGAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: HNGRKRSIVWREGIMRVGLRSCI*VRMSML
Trigger: CAACATGCTCATCCGCACGCATATGCACGACCTCAA...TCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AACATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACCTGGGGTCGCCAGCTTaGTCTTGTACCGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: NIVLLSPGQDAAFTTEENLGSPA*SCTAGL
Trigger: CAGGCCTGCGGTACAAGAGCAAGCTGGCGACCCCAG...GTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406172.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTGAGAATAAATTAGGGTCACTAGCTTTGCCTGCCTaGCAGAGCAGGGCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: GNRHNDLGGGGAENKLGSLALPA*QSRACG
Trigger: ACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAG...TGACCCTAATTTATTCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTGAGAATAAATTAGGGTCAGGCGGGAAGGGATCATaGGGGTGGGAACATCGGGAG +
Preference number: 4 (lower is better)
Translates to: GNRHNDLGGGGAENKLGSGGKGS*GWEHRE
Trigger: CTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCC...TGACCCTAATTTATTCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CTCGGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTGAGAATAAATTAGGGCCTGGTTGGGCAGTGTaGCGAAGCCCACGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LGNRHNDLGGGGAENKLGPGWAV*RSPRTA
Trigger: AGCAGTACGTGGGCTTCGCCACACTGCCCAACCAGG...CCCTAATTTATTCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp ACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAAAGAATCTCTACCGTCTaGCTGATGCGCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TTEENGASCGGKGSCGWERISTV*LMRSSA
Trigger: TGCTGAGGAGCGCATCAGCCAGACGGTAGAGATTCT...TTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TGGAGAAGGGGTGTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTGGGAACTGGTATACATaGATCCCAAACTTGTCAATC +
Preference number: 4 (lower is better)
Translates to: WRRGVSGHDPAPCSLWPPGNWYT*IPNLSI
Trigger: GATTGACAAGTTTGGGATCCATGTATACCAGTTCCC...AGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp TTCTGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGTCACACTCAGGGAACTaGTATACATGGATCCCAAAC +
Preference number: 4 (lower is better)
Translates to: FCLALPACQSRACGLGAVSHSGN*YTWIPN
Trigger: GTTTGGGATCCATGTATACCAGTTCCCTGAGTGTGA...CACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGATGTTGACCTTCTCATaGAATGCCTTCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: VSGHDPAPCSLWPPYVWRMLTFS*NAFMKP
Trigger: GGGTTTCATGAAGGCATTGCATGAGAAGGTCAACAT...CCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTTTGAGGTCGTGCATATaGGTGCGGATGAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: QPLASLCLEGSHLIQPNPLRSCI*VRMSML
Trigger: CAACATGCTCATCCGCACGCATATGCACGACCTCAA...AGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp TCACCAACATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGTGGTCATCTGCTGGATaGAGTGCGCGCGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SPTLFSCHQDRTRHSQRKWSSAG*SARGSS
Trigger: AGAACTACCGCGCGCACTGCATCCAGCAGATGACCA...CTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTTGGTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp AACATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACTTCACCGACTTGCGGTaGACCTGGTTGGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: NIVLLSPGQDAAFTTEENFTDLR*TWLGSV
Trigger: CACACTGCCCAACCAGGTGCACCGCAAGTCGGTGAA...GTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp ACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCATTTGATGACCTTCTCATGCAATaGCTTCATGAAACCCACATC +
Preference number: 4 (lower is better)
Translates to: TPLLAASGLLMSGGLPFDDLLMQ*LHETHI
Trigger: GATGTGGGTTTCATGAAGGCATTGCATGAGAAGGTC...ATCAAATGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CAGGACGCGGCATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGAGACCTTCTCATGCAATaGCTTCATGAAACCCACATC +
Preference number: 4 (lower is better)
Translates to: QDAAFTTEENGASCGGKGDLLMQ*LHETHI
Trigger: GATGTGGGTTTCATGAAGGCATTGCATGAGAAGGTC...TCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAATGCCGCGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp ACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCATTTGATATGTTGACCTTCTCATaGAATGCCTTCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: TPLLAASGLLMSGGLPFDMLTFS*NAFMKP
Trigger: GGGTTTCATGAAGGCATTGCATGAGAAGGTCAACAT...ATCAAATGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CTTATGTCTGGAGGGCTCCCATTTGATTCAGCCCAACCCTGCCCGCTAGGCGTCGGGAACTGGTATACATaGATCCCAAACTTGTCAATC +
Preference number: 4 (lower is better)
Translates to: LMSGGLPFDSAQPCPLGVGNWYT*IPNLSI
Trigger: GATTGACAAGTTTGGGATCCATGTATACCAGTTCCC...GACGCCTAGCGGGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAGACATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp ACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATTCACACTCAGGGAACTaGTATACATGGATCCCAAAC +
Preference number: 4 (lower is better)
Translates to: TEENGASCGGKGSCGWEHSHSGN*YTWIPN
Trigger: GTTTGGGATCCATGTATACCAGTTCCCTGAGTGTGA...ATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp CACTGGGGCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTTATGTTGACCTTCTCATaGAATGCCTTCATGAAACCC +
Preference number: 4 (lower is better)
Translates to: HWGREQTQDPGNPLLPSFMLTFS*NAFMKP
Trigger: GGGTTTCATGAAGGCATTGCATGAGAAGGTCAACAT...AAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGCCCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CCA 90 bp CACTGGGGCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTTGGGAACTGGTATACATaGATCCCAAACTTGTCAATC +
Preference number: 4 (lower is better)
Translates to: HWGREQTQDPGNPLLPSFGNWYT*IPNLSI
Trigger: GATTGACAAGTTTGGGATCCATGTATACCAGTTCCC...AAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGCCCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR GCA 90 bp GGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTGAGAATAAATTAGGGTCATCATCACGGAAGTACTaGTCAAACTGCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: GNRHNDLGGGGAENKLGSSSRKY*SNCWST
Trigger: TGTGGACCAGCAGTTTGAGCAGTACTTCCGTGATGA...TGACCCTAATTTATTCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS GCA 90 bp GAGCCGAGGCGCGGTCGGGCCATGGCTCGCGTGGACCGGGAGCCCTaGCGCGCCCCCGGGGCCTCAGTCCGGGCTCCAGGACAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: EPRRGRAMARVDREP*RAPGASVRAPGQQE
Trigger: CTCCTGCTGTCCTGGAGCCCGGACTGAGGCCCCGGGGGCGCGGCAGGGCTCCCGGTCCACGCGAGCCATGGCCCGACCGCGCCTCGGCTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490204.1
CDS CCA 90 bp CCGCCCCGCCCCTGCCACGCCCGCACCGACCACAGTGCTGCGGCCTaGCCAGAAATAGCCCAGAGGCCGCGCGGACGCGCGCTGCAGCGG +
Preference number: 5 (lower is better)
Translates to: PPRPCHARTDHSAAA*PEIAQRPRGRALQR
Trigger: CCGCTGCAGCGCGCGTCCGCGCGGCCTCTGGGCTATTTCTGGCCAGGCCGCAGCACTGTGGTCGGTGCGGGCGTGGCAGGGGCGGGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS CCA 90 bp GAGACGGCCCCGCCCGCCGTCGCCGGGAAACGGTCGCCTGGAAATTaGGCCGCGGGCGGAGCCACCCGAAAGCGGCTGCGGAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: ETAPPAVAGKRSPGN*AAGGATRKRLRRAG
Trigger: CCCTGCCCTCCGCAGCCGCTTTCGGGTGGCTCCGCCCGCGGCCCAATTTCCAGGCGACCGTTTCCCGGCGACGGCGGGCGGGGCCGTCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490204.1
CDS CCA 90 bp GGCGGCAGAGACGGCCCCGCCCGCCGTCGCCGGGAAACGGTCGCCTaGAAATTGGGCCGCGGGCGGAGCCACCCGAAAGCGGCTGCGGAG +
Preference number: 5 (lower is better)
Translates to: GGRDGPARRRRETVA*KLGRGRSHPKAAAE
Trigger: CTCCGCAGCCGCTTTCGGGTGGCTCCGCCCGCGGCCCAATTTCCAGGCGACCGTTTCCCGGCGACGGCGGGCGGGGCCGTCTCTGCCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490204.1
CDS GCA 90 bp GGCCGCTTGAGCCGCCTCTGGGCCTGGGTCCGCGGCGACAGCAGCTaGTCCACCAGGCGGTCCTGGGGCGCTGCCAGCGAGTCCATCGCG +
Preference number: 5 (lower is better)
Translates to: GRLSRLWAWVRGDSS*STRRSWGAASESIA
Trigger: CGCGATGGACTCGCTGGCAGCGCCCCAGGACCGCCTGGTGGAGCAGCTGCTGTCGCCGCGGACCCAGGCCCAGAGGCGGCTCAAGCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490204.1
CDS GCA 90 bp GATAAGGCCGCCCCGCCCCTGCCACGCCCGCACCGACCACAGTGCTaGGGCCTGGCCAGAAATAGCCCAGAGGCCGCGCGGACGCGCGCT +
Preference number: 5 (lower is better)
Translates to: DKAAPPLPRPHRPQC*GLARNSPEAARTRA
Trigger: AGCGCGCGTCCGCGCGGCCTCTGGGCTATTTCTGGCCAGGCCGCAGCACTGTGGTCGGTGCGGGCGTGGCAGGGGCGGGGCGGCCTTATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS GCA 90 bp AGCGATAAGGCCGCCCCGCCCCTGCCACGCCCGCACCGACCACAGTaGTGCGGCCTGGCCAGAAATAGCCCAGAGGCCGCGCGGACGCGC +
Preference number: 5 (lower is better)
Translates to: SDKAAPPLPRPHRPQ*CGLARNSPEAARTR
Trigger: GCGCGTCCGCGCGGCCTCTGGGCTATTTCTGGCCAGGCCGCAGCACTGTGGTCGGTGCGGGCGTGGCAGGGGCGGGGCGGCCTTATCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS GCA 90 bp CGCGGCCCGGAGCCCATGGCGAGAAGACGGCAGCCCGGCTTACTCTaGAGCGGGAGGCGTAGGCGGGAGAGCCGAGCGATAAGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: RGPEPMARRRQPGLL*SGRRRRESRAIRPP
Trigger: GGGCGGCCTTATCGCTCGGCTCTCCCGCCTACGCCTCCCGCTGCAGAGTAAGCCGGGCTGCCGTCTTCTCGCCATGGGCTCCGGGCCGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS-3UTR CAA 90 bp CCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGCGGACCCGCTGCCCCTaGGCCTCCACCACCGTGTTG +
Preference number: 5 (lower is better)
Translates to: PASPGREQSGLVSRGARARTRCP*ASTTVL
Trigger: CAACACGGTGGTGGAGGCCAAGGGGCAGCGGGTCCG...CGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383045.7
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp ACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGGCCCTCGGACCCGCTGCCCCTaGGCCTCCACCACCGTGTTG +
Preference number: 5 (lower is better)
Translates to: TAPRVARRWLTAQCPGGPRTRCP*ASTTVL
Trigger: CAACACGGTGGTGGAGGCCAAGGGGCAGCGGGTCCG...AGGGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp CTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGCGGACCCGCTGCCCCTaGGCCTCCACCACCGTGTTG +
Preference number: 5 (lower is better)
Translates to: LRFGCCDRPGAGEGQGRRRTRCP*ASTTVL
Trigger: CAACACGGTGGTGGAGGCCAAGGGGCAGCGGGTCCG...CCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS GCA 90 bp ATGTCCTTGAGCCGCCTCTGGGCCTGGGTCCGCGGCGACAGCAGCTaGTCCACCAGGCGGTCCTGGGGCGCTGCCAGCGAGTCCATCGCG +
Preference number: 5 (lower is better)
Translates to: MSLSRLWAWVRGDSS*STRRSWGAASESIA
Trigger: CGCGATGGACTCGCTGGCAGCGCCCCAGGACCGCCTGGTGGAGCAGCTGCTGTCGCCGCGGACCCAGGCCCAGAGGCGGCTCAAGGACAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS CCA 90 bp CCAGGCCCGGTCAGGCCGCCAGAGCCCGGCGACAGCGAGGGACCTTaGCGCGGCTCTGCCTTAGGCTGCGTTGTCCACCCCGTTTTGCGG +
Preference number: 5 (lower is better)
Translates to: PGPVRPPEPGDSEGP*RGSALGCVVHPVLR
Trigger: CCGCAAAACGGGGTGGACAACGCAGCCTAAGGCAGAGCCGCGCCAAGGTCCCTCGCTGTCGCCGGGCTCTGGCGGCCTGACCGGGCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383045.7
ENST00000438754.6
ENST00000490204.1
CDS-3UTR CAA 90 bp GGGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGAGCAGGGCCTGCGGTTaGGGTGCTGTGACCGTCCGG +
Preference number: 5 (lower is better)
Translates to: GAVAPRLRVGNSPVWCPGSRACG*GAVTVR
Trigger: CCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCT...CCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp CCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACGACAGCGAGGGACCTaGGCGCGGCTCTGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: PGREQSGLVSRGARASRRRQRGT*ARLCLR
Trigger: CCTAAGGCAGAGCCGCGCCAAGGTCCCTCGCTGTCG...TCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR CAA 90 bp CCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCGACAGCGAGGGACCTaGGCGCGGCTCTGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: PRLRVGNSPVWCPGVRGRRQRGT*ARLCLR
Trigger: CCTAAGGCAGAGCCGCGCCAAGGTCCCTCGCTGTCG...ACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR CAA 90 bp GGGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGTTGCGGTGCACCTGGTaGGGCAGTGTGGCGAAGCCC +
Preference number: 5 (lower is better)
Translates to: GAVAPRLRVGNSPVWCPGLRCTW*GSVAKP
Trigger: GGGCTTCGCCACACTGCCCAACCAGGTGCACCGCAA...CCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGAGCAGGGCCTGCGGTTaGGGTGCTGTGACCGTCCGG +
Preference number: 5 (lower is better)
Translates to: ARAGDGTESCQEVAHRPVSRACG*GAVTVR
Trigger: CCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCT...CACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp CGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGGCCCTCTCACGACCCCGCTCCTaGCAGCCTCTGGCCTCCTTA +
Preference number: 5 (lower is better)
Translates to: RHRELPGGGSPPSAPGALSRPRS*QPLASL
Trigger: TAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGA...GAGGGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp TCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGGGACGGCACCGAGAGTaGCCAGGAGGTGGCTCACCG +
Preference number: 5 (lower is better)
Translates to: SGSGTVRSGVQGCEGVPEGRHRE*PGGGSP
Trigger: CGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCC...CTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS GCA 90 bp CAGGCCGCCAGAGCCCGGCGACAGCGAGGGACCTTGGCGCGGCTCTaGCTTAGGCTGCGTTGTCCACCCCGTTTTGCGGACGCGGGAAGT +
Preference number: 5 (lower is better)
Translates to: QAARARRQRGTLARL*LRLRCPPRFADAGS
Trigger: ACTTCCCGCGTCCGCAAAACGGGGTGGACAACGCAGCCTAAGGCAGAGCCGCGCCAAGGTCCCTCGCTGTCGCCGGGCTCTGGCGGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383045.7
ENST00000438754.6
ENST00000490204.1
CDS CCA 90 bp GCTTCTCAGTCTCGGCGTCCGGGGTGGGCAGCGGCAGGATCGGGATaGGGCTCTCCATGCGGCTGTCCTGGGTCAGTTTGCTGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: ASQSRRPGWAAAGSG*GSPCGCPGSVCCAG
Trigger: CCCCGCGCAGCAAACTGACCCAGGACAGCCGCATGGAGAGCCCCATCCCGATCCTGCCGCTGCCCACCCCGGACGCCGAGACTGAGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS-3UTR CAA 90 bp TGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGTTGCGGTGCACCTGGTaGGGCAGTGTGGCGAAGCCC +
Preference number: 5 (lower is better)
Translates to: CGPASPGREQSGLVSRGALRCTW*GSVAKP
Trigger: GGGCTTCGCCACACTGCCCAACCAGGTGCACCGCAA...CGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTGCCCCGGGGGCCCAGCACTCGGTGTTGTaGACAGCGTCCCCGAATCCC +
Preference number: 5 (lower is better)
Translates to: GRHRELPGGGSPPSAPGAQHSVL*TASPNP
Trigger: GGGATTCGGGGACGCTGTCAACAACACCGAGTGCTG...GGCCCCCGGGGCACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGTCTGGGGTCGCCAGCTaGCTCTTGTACCGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: GPASPGREQSGLVSRGARSGVAS*LLYRRP
Trigger: AGGCCTGCGGTACAAGAGCAAGCTGGCGACCCCAGA...CCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CAA 90 bp GGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACGGGTTGTCCACCCCGTTTaGCGGACGCGGGAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: GREQSGLVSRGARASRRRVVHPV*RTREVR
Trigger: CCTCACTTCCCGCGTCCGCAAAACGGGGTGGACAAC...CCGTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR CAA 90 bp GGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGCAGCACTCGGTGTTGTaGACAGCGTCCCCGAATCCC +
Preference number: 5 (lower is better)
Translates to: GPASPGREQSGLVSRGARQHSVL*TASPNP
Trigger: GGGATTCGGGGACGCTGTCAACAACACCGAGTGCTG...CCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GCCTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGCCTCCACCACCGTGTaGCTGCCTATAACGGCGAAG +
Preference number: 5 (lower is better)
Translates to: ACGLGAVTVRGRGKGKGGASTTV*LPITAK
Trigger: CTTCGCCGTTATAGGCAGCAACACGGTGGTGGAGGC...GCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGGCCTCCACCACCGTGTaGCTGCCTATAACGGCGAAG +
Preference number: 5 (lower is better)
Translates to: GLWPRVSGSGTVRSGVQGASTTV*LPITAK
Trigger: CTTCGCCGTTATAGGCAGCAACACGGTGGTGGAGGC...CCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000383045.7
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GCCTCGAGCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGGTCGCCAGCTTGCTCTaGTACCGCAGGCCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: ASSEGRGRHRELPGGGSPVASLL*YRRPVL
Trigger: GAGCACAGGCCTGCGGTACAAGAGCAAGCTGGCGAC...CGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGCTCGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CAA 90 bp GGGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGCTGGAGGGCTCCCATTaGATTCAGCCCAACCCTGCC +
Preference number: 5 (lower is better)
Translates to: GAVAPRLRVGNSPVWCPGLEGSH*IQPNPA
Trigger: GGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAG...CCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp AGGGCCTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGATCACGACCCCGCTCCTaGCAGCCTCTGGCCTCCTTA +
Preference number: 5 (lower is better)
Translates to: RACGLGAVTVRGRGKGKGSRPRS*QPLASL
Trigger: TAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGA...TCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp TCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGTGCTTGTCAATGTCCTaGAGCCGCCTCTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SPGREQSGLVSRGARASRCLSMS*SRLWAW
Trigger: CCAGGCCCAGAGGCGGCTCAAGGACATTGACAAGCA...CCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR CAA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGCCTCCACCACCGTGTaGCTGCCTATAACGGCGAAG +
Preference number: 5 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCEASTTV*LPITAK
Trigger: CTTCGCCGTTATAGGCAGCAACACGGTGGTGGAGGC...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000383045.7
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp CCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCTCGCACGTCACGTCCTaGAGGTCGTGCATATGCGTG +
Preference number: 5 (lower is better)
Translates to: PRVSGSGTVRSGVQGCEGSHVTS*RSCICV
Trigger: CACGCATATGCACGACCTCAAGGACGTGACGTGCGA...GCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGTCGCACGTCACGTCCTaGAGGTCGTGCATATGCGTG +
Preference number: 5 (lower is better)
Translates to: GPASPGREQSGLVSRGARSHVTS*RSCICV
Trigger: CACGCATATGCACGACCTCAAGGACGTGACGTGCGA...CCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GGGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGTTGTCAATGTCCTGCTaGTCCTCTGGGGTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: GAVAPRLRVGNSPVWCPGLSMSC*SSGVAS
Trigger: GCTGGCGACCCCAGAGGACAAGCAGGACATTGACAA...CCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CAA 90 bp AGGGCCTGCGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGACTCTTCTGCCTAGCTTaGCCTGCCTGCCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: RACGLGAVTVRGRGKGKGLFCLA*PACQSR
Trigger: CCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAG...TCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCGCAGGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp AGCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTTCACGACCCCGCTCCTaGCAGCCTCTGGCCTCCTTA +
Preference number: 5 (lower is better)
Translates to: SEGRGRHRELPGGGSPPSSRPRS*QPLASL
Trigger: TAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGA...ACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS GCA 90 bp GAGGTCTGGCTCGCGGCTGGGGCGCGCACCTGGTCATCTGCTGGATaGAGTGCGCGCGGTAGTTCTCGTAGTGCACGTCGCACGTCACGT +
Preference number: 5 (lower is better)
Translates to: EVWLAAGARTWSSAG*SARGSSRSARRTSR
Trigger: ACGTGACGTGCGACGTGCACTACGAGAACTACCGCGCGCACTGCATCCAGCAGATGACCAGGTGCGCGCCCCAGCCGCGAGCCAGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS-3UTR CAA 90 bp GGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTTCCAGCACTCGGTGTaGTTGACAGCGTCCCCGAAT +
Preference number: 5 (lower is better)
Translates to: GLWPRVSGSGTVRSGVQGFQHSV*LTASPN
Trigger: ATTCGGGGACGCTGTCAACAACACCGAGTGCTGGAA...CCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGTTGTCAATGTCCTGCTaGTCCTCTGGGGTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCELSMSC*SSGVAS
Trigger: GCTGGCGACCCCAGAGGACAAGCAGGACATTGACAA...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CAA 90 bp AGCGAGGGCAGGGGACGGCACCGAGAGTTGCCAGGAGGTGGCTCACCGCCCAGTCTCTTCTGCCTAGCTTaGCCTGCCTGCCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SEGRGRHRELPGGGSPPSLFCLA*PACQSR
Trigger: CCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAG...ACTGGGCGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCCCCTGCCCTCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp TGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGCAAAGGAGGGCTCCCCTCTTCTGCCTAGCTTaGCCTGCCTGCCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: WGLSTRWVTRGSRQRRAPLFCLA*PACQSR
Trigger: CCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAG...GGGAGCCCTCCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp TGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGAAGCCCACGTACTGCTaGTCAATGTCCTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: WPRVSGSGTVRSGVQGCEKPTYC*SMSLSR
Trigger: GCGGCTCAAGGACATTGACAAGCAGTACGTGGGCTT...CTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS-3UTR CAA 90 bp CTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCGTCTTGCGGTGCACCTGGTaGGGCAGTGTGGCGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LALPACQSRACGLGAVTVLRCTW*GSVAKP
Trigger: GGGCTTCGCCACACTGCCCAACCAGGTGCACCGCAA...GACGGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GCGGGCGGAGACAACCCGGCGGGTGAGCAGCACCGCGGAGGAGCATCCCTGACGAGCAGCTTCCGGTCCTaGTACAAGTCTGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: AGGDNPAGEQHRGGASLTSSFRS*YKSVRK
Trigger: CTTCCTGACAGACTTGTACAAGGACCGGAAGCTGCT...CGTCAGGGATGCTCCTCCGCGGTGCTGCTCACCCGCCGGGTTGTCTCCGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406172.6
CDS-3UTR CAA 90 bp GAGGGCGTCCCGGAGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGCATTCCAGCACTCGGTGTaGTTGACAGCGTCCCCGAAT +
Preference number: 5 (lower is better)
Translates to: EGVPETDGVSAASVTGPAFQHSV*LTASPN
Trigger: ATTCGGGGACGCTGTCAACAACACCGAGTGCTGGAA...TGCAGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCTCCGGGACGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
CDS-3UTR CAA 90 bp GGGGCTGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGACAAGACAGTCAGCTTaGGCGATGAGAGGCACGATG +
Preference number: 5 (lower is better)
Translates to: GAVAPRLRVGNSPVWCPGTRQSA*AMRGTM
Trigger: CATCGTGCCTCTCATCGCCAAAGCTGACTGTCTTGT...CCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGACGGCTGTCCTGGGTCAGTTaGCTGGTCATCTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: GREQSGLVSRGARASRRRLSWVS*LVICWM
Trigger: CATCCAGCAGATGACCAGCAAACTGACCCAGGACAG...CCGTCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp TCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCCCAAGGTCAGAGAGGGCCAGCAGCAGGGCCTGCGGTTaGGGTGCTGTGACCGTCCGG +
Preference number: 5 (lower is better)
Translates to: SEVPPNFAPDPPRSERASSRACG*GAVTVR
Trigger: CCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCT...GCTGGCCCTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGCGGGACTTCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCAGCAGGGCCTGCGGTTaGGGTGCTGTGACCGTCCGG +
Preference number: 5 (lower is better)
Translates to: EGQGRRISEVPPNFAPDPSRACG*GAVTVR
Trigger: CCGGACGGTCACAGCACCCAAACCGCAGGCCCTGCT...GGGATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp CGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCATTTGGGACGGCACCGAGAGTaGCCAGGAGGTGGCTCACCG +
Preference number: 5 (lower is better)
Translates to: RPRSLQPLASLCLEGSHLGRHRE*PGGGSP
Trigger: CGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCC...CAAATGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS GCA 90 bp CGTACTGCTTGTCAATGTCCTGCTTGTCCTCTGGGGTCGCCAGCTTaGTCTTGTACCGCAGGCCTGTGCTCATGGTGGCCGCCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RTACQCPACPLGSPA*SCTAGLCSWWPPAG
Trigger: CCCCGCCGGCGGCCACCATGAGCACAGGCCTGCGGTACAAGAGCAAGCTGGCGACCCCAGAGGACAAGCAGGACATTGACAAGCAGTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS GCA 90 bp GCTCCCACCCGCTCTCAGGGGCACACGGAGCACTCGGACACCCGCTaGGACGTTCACCAACATTGTTCTCCTGTCACCAGGACAGGACGC +
Preference number: 5 (lower is better)
Translates to: APTRSQGHTEHSDTR*DVHQHCSPVTRTGR
Trigger: GCGTCCTGTCCTGGTGACAGGAGAACAATGTTGGTGAACGTCGCAGCGGGTGTCCGAGTGCTCCGTGTGCCCCTGAGAGCGGGTGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS CCA 90 bp TGTGGCTACTCCAGGGACTGCGGGGGTCTCCCGAGCTCCGCTCTGTaGGCCACCCACCTCCATGACCCCAGTAGAATCCCAACAGGCAAG +
Preference number: 5 (lower is better)
Translates to: CGYSRDCGGLPSSAL*ATHLHDPSRIPTGK
Trigger: CTTGCCTGTTGGGATTCTACTGGGGTCATGGAGGTGGGTGGCCCACAGAGCGGAGCTCGGGAGACCCCCGCAGTCCCTGGAGTAGCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431124.5
CDS-3UTR CAA 90 bp GTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGTTGCGGTGCACCTGGTaGGGCAGTGTGGCGAAGCCC +
Preference number: 5 (lower is better)
Translates to: VSGHDPAPCSLWPPYVWRLRCTW*GSVAKP
Trigger: GGGCTTCGCCACACTGCCCAACCAGGTGCACCGCAA...CCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp TGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGCAGCTTCCGGTCCTaGTACAAGTCTGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: CGPASPGREQSGLVSRGASSFRS*YKSVRK
Trigger: CTTCCTGACAGACTTGTACAAGGACCGGAAGCTGCT...CGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp CGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCAGCAGCTTCCGGTCCTaGTACAAGTCTGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RVSGSGTVRSGVQGCEGVSSFRS*YKSVRK
Trigger: CTTCCTGACAGACTTGTACAAGGACCGGAAGCTGCT...GACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GACTCGGCCCGCCTCGACAGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCCAGCACTCGGTGTTGTaGACAGCGTCCCCGAATCCC +
Preference number: 5 (lower is better)
Translates to: DSARLDRKWGLSTRWVTRQHSVL*TASPNP
Trigger: GGGATTCGGGGACGCTGTCAACAACACCGAGTGCTG...GCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCTGTCGAGGCGGGCCGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp CCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCATGAGAGGCACGATGTaGACCTTCTCATGCAATGCC +
Preference number: 5 (lower is better)
Translates to: PRVSGSGTVRSGVQGCEGMRGTM*TFSCNA
Trigger: GGCATTGCATGAGAAGGTCAACATCGTGCCTCTCAT...GCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGATGAGAGGCACGATGTaGACCTTCTCATGCAATGCC +
Preference number: 5 (lower is better)
Translates to: GPASPGREQSGLVSRGARMRGTM*TFSCNA
Trigger: GGCATTGCATGAGAAGGTCAACATCGTGCCTCTCAT...CCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp TGTGGCCCCGCGTCTCCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGACAAGACAGTCAGCTTaGGCGATGAGAGGCACGATG +
Preference number: 5 (lower is better)
Translates to: CGPASPGREQSGLVSRGATRQSA*AMRGTM
Trigger: CATCGTGCCTCTCATCGCCAAAGCTGACTGTCTTGT...CGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGGAGACGCGGGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp CACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGACGGACCCGCTGCCCCTaGGCCTCCACCACCGTGTTG +
Preference number: 5 (lower is better)
Translates to: HNGRKRSIVWREGIMRVGRTRCP*ASTTVL
Trigger: CAACACGGTGGTGGAGGCCAAGGGGCAGCGGGTCCG...TCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GGCGTCCCGGAGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGCATCTCTGTCCTGGGTCAGTTaGCTGGTCATCTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: GVPETDGVSAASVTGPASLSWVS*LVICWM
Trigger: CATCCAGCAGATGACCAGCAAACTGACCCAGGACAG...AGATGCAGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCTCCGGGACGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
CDS-3UTR CAA 90 bp CGGTTTGGGTGCTGTGACCGTCCGGGGGCGGGGGAAGGGCAAGGGAGGCGGATCAAGCCCACGTACTGCTaGTCAATGTCCTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RFGCCDRPGAGEGQGRRIKPTYC*SMSCLS
Trigger: GGACAAGCAGGACATTGACAAGCAGTACGTGGGCTT...GATCCGCCTCCCTTGCCCTTCCCCCGCCCCCGGACGGTCACAGCACCCAAACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CAA 90 bp TGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGCGGTTTGGGTGCTGTGACCTCACGACCCCGCTCCTaGCAGCCTCTGGCCTCCTTA +
Preference number: 5 (lower is better)
Translates to: CLALPACQSRACGLGAVTSRPRS*QPLASL
Trigger: TAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGA...GGTCACAGCACCCAAACCGCAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp AAGGGGTGTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTGGACGGCACCGAGAGTaGCCAGGAGGTGGCTCACCG +
Preference number: 5 (lower is better)
Translates to: KGCKRSRPRSLQPLASLCGRHRE*PGGGSP
Trigger: CGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCC...ACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp CCGGGTCGGGAACAGTCCGGTCTGGTGTCCAGGGGTGCGAGGGCGTCCCGGAGAATGAGAGGCACGATGTaGACCTTCTCATGCAATGCC +
Preference number: 5 (lower is better)
Translates to: PGREQSGLVSRGARASRRMRGTM*TFSCNA
Trigger: GGCATTGCATGAGAAGGTCAACATCGTGCCTCTCAT...TCTCCGGGACGCCCTCGCACCCCTGGACACCAGACCGGACTGTTCCCGACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp TGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGCAAAGGAGGGCTCCCACAAGACAGTCAGCTTaGGCGATGAGAGGCACGATG +
Preference number: 5 (lower is better)
Translates to: WGLSTRWVTRGSRQRRAPTRQSA*AMRGTM
Trigger: CATCGTGCCTCTCATCGCCAAAGCTGACTGTCTTGT...GGGAGCCCTCCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTTCGCACGTCACGTCCTaGAGGTCGTGCATATGCGTG +
Preference number: 5 (lower is better)
Translates to: AGEGQGRRISEVPPNFAPSHVTS*RSCICV
Trigger: CACGCATATGCACGACCTCAAGGACGTGACGTGCGA...AGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATGTCGCCAGCTTGCTCTaGTACCGCAGGCCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: GEGQGRRISEVPPNFAPDVASLL*YRRPVL
Trigger: GAGCACAGGCCTGCGGTACAAGAGCAAGCTGGCGAC...ATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CAA 90 bp CGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGTTGTCAATGTCCTGCTaGTCCTCTGGGGTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: RGKGKGGGSLKSRPTSLLLSMSC*SSGVAS
Trigger: GCTGGCGACCCCAGAGGACAAGCAGGACATTGACAA...CAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CAA 90 bp TGGAGAAGGGGTGTAAGCGGTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTCTGGAGGGCTCCCATTaGATTCAGCCCAACCCTGCC +
Preference number: 5 (lower is better)
Translates to: WRRGVSGHDPAPCSLWPPLEGSH*IQPNPA
Trigger: GGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAG...AGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGACCGCTTACACCCCTTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp AGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGACGGCACCGAGAGTaGCCAGGAGGTGGCTCACCG +
Preference number: 5 (lower is better)
Translates to: RKRSIVWREGIMRVGTSGGRHRE*PGGGSP
Trigger: CGGTGAGCCACCTCCTGGCAACTCTCGGTGCCGTCC...TCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS CCA 90 bp CCTTGGCCCTACCCCCAGGGGACCCACACCGCGAGAACAGAACAGTaGGAGCTGGACCTGAAAGGGAGTCCTTGGAGAGGTCCCATGGAA +
Preference number: 5 (lower is better)
Translates to: PWPYPQGTHTARTEQ*ELDLKGSPWRGPME
Trigger: TTCCATGGGACCTCTCCAAGGACTCCCTTTCAGGTCCAGCTCCCACTGTTCTGTTCTCGCGGTGTGGGTCCCCTGGGGGTAGGGCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477238.1
CDS-3UTR CAA 90 bp GCGGGGGAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTAAGCCCACGTACTGCTaGTCAATGTCCTTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: AGEGQGRRISEVPPNFAPKPTYC*SMSLSR
Trigger: GCGGCTCAAGGACATTGACAAGCAGTACGTGGGCTT...AGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTCCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438754.6
CDS-3UTR CAA 90 bp AGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGCATCTGCTGCTTCATCTGGAGGGCTCCCATTaGATTCAGCCCAACCCTGCC +
Preference number: 5 (lower is better)
Translates to: RRTVCPRRASLVLHLLLHLEGSH*IQPNPA
Trigger: GGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAG...ATGAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
CDS-3UTR CAA 90 bp GGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCCCAAGGTCAGAGAGGGGCCTCCACCACCGTGTaGCTGCCTATAACGGCGAAG +
Preference number: 5 (lower is better)
Translates to: GSLKSRPTSLLIPQGQRGASTTV*LPITAK
Trigger: CTTCGCCGTTATAGGCAGCAACACGGTGGTGGAGGC...CCCTCTCTGACCTTGGGGGATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp AGACGGACGGTGTGTCCGCGGCGAGCGTCACTGGTCCTGCATCTGCTGCTTCATTCGCACGTCACGTCCTaGAGGTCGTGCATATGCGTG +
Preference number: 5 (lower is better)
Translates to: RRTVCPRRASLVLHLLLHSHVTS*RSCICV
Trigger: CACGCATATGCACGACCTCAAGGACGTGACGTGCGA...ATGAAGCAGCAGATGCAGGACCAGTGACGCTCGCCGCGGACACACCGTCCGTCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
CDS-3UTR CAA 90 bp CACCAGGACAGGACGCGGCATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGTCTGGGGTCGCCAGCTaGCTCTTGTACCGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: HQDRTRHSQRKKTEHRVASGVAS*LLYRRP
Trigger: AGGCCTGCGGTACAAGAGCAAGCTGGCGACCCCAGA...CGCCACACGATGCTCCGTTTTCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406172.6
ENST00000455784.7
CDS-3UTR CAA 90 bp CTAGGCTCAGGATCCCGGCACACCACAGCGGTGCTGGGGAGAAGAGGCCTCGAGAAGCCCACGTACTGCTaGTCAATGTCCTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: LGSGSRHTTAVLGRRGLEKPTYC*SMSCLS
Trigger: GGACAAGCAGGACATTGACAAGCAGTACGTGGGCTT...CTCGAGGCCTCTTCTCCCCAGCACCGCTGTGGTGTGCCGGGATCCTGAGCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CAA 90 bp ACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATGTTGTCCACCCCGTTTaGCGGACGCGGGAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: TEENGASCGGKGSCGWEHVVHPV*RTREVR
Trigger: CCTCACTTCCCGCGTCCGCAAAACGGGGTGGACAAC...ATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438754.6
CDS-3UTR CAA 90 bp GTCACGACCCCGCTCCTTGCAGCCTCTGGCCTCCTTATGTCTGGAGGGCTCCCAAGCAGCTTCCGGTCCTaGTACAAGTCTGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VTTPLLAASGLLMSGGLPSSFRS*YKSVRK
Trigger: CTTCCTGACAGACTTGTACAAGGACCGGAAGCTGCT...TGGGAGCCCTCCAGACATAAGGAGGCCAGAGGCTGCAAGGAGCGGGGTCGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp ACTGGGGCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTTGTCTGGGGTCGCCAGCTaGCTCTTGTACCGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: TGAGNRPRILGILFCLALSGVAS*LLYRRP
Trigger: AGGCCTGCGGTACAAGAGCAAGCTGGCGACCCCAGA...CAAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGCCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CAA 90 bp AGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGACTGGAGGGCTCCCATTaGATTCAGCCCAACCCTGCC +
Preference number: 5 (lower is better)
Translates to: RKRSIVWREGIMRVGTSGLEGSH*IQPNPA
Trigger: GGCAGGGTTGGGCTGAATCAAATGGGAGCCCTCCAG...TCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GGTCCAGGCCCCTCGGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTGAGAAGCAGCTTCCGGTCCTaGTACAAGTCTGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GPGPSETDTMTWEGVVLRSSFRS*YKSVRK
Trigger: CTTCCTGACAGACTTGTACAAGGACCGGAAGCTGCT...TCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCGAGGGGCCTGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp CACTGGGGCAGGGAACAGACCCAGGATCCTGGGAATCCTCTTCTGCCTAGCTTTCAGCACTCGGTGTTGTaGACAGCGTCCCCGAATCCC +
Preference number: 5 (lower is better)
Translates to: HWGREQTQDPGNPLLPSFQHSVL*TASPNP
Trigger: GGGATTCGGGGACGCTGTCAACAACACCGAGTGCTG...AAAGCTAGGCAGAAGAGGATTCCCAGGATCCTGGGTCTGTTCCCTGCCCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GATCCTGGGAATCCTCTTCTGCCTAGCTTTGCCTGCCTGCCAGAGCAGGGCCTGTTCCAGCACTCGGTGTaGTTGACAGCGTCCCCGAAT +
Preference number: 5 (lower is better)
Translates to: DPGNPLLPSFACLPEQGLFQHSV*LTASPN
Trigger: ATTCGGGGACGCTGTCAACAACACCGAGTGCTGGAA...CAGGCCCTGCTCTGGCAGGCAGGCAAAGCTAGGCAGAAGAGGATTCCCAGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp ACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGGAGGCCTATGAGAGGCACGATGTaGACCTTCTCATGCAATGCC +
Preference number: 5 (lower is better)
Translates to: TEHRVAGRDHAGGNIGRPMRGTM*TFSCNA
Trigger: GGCATTGCATGAGAAGGTCAACATCGTGCCTCTCAT...AGGCCTCCCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp AGAAAATGGGGTCTCAGCACTCGCTGGGTGACCCGCGGGAGCAGGCAAAGGAGGAAGCCCACGTACTGCTaGTCAATGTCCTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RKWGLSTRWVTRGSRQRRKPTYC*SMSCLS
Trigger: GGACAAGCAGGACATTGACAAGCAGTACGTGGGCTT...CCTCCTTTGCCTGCTCCCGCGGGTCACCCAGCGAGTGCTGAGACCCCATTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS-3UTR CAA 90 bp CTCGGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTGAGAATAAATTAGGGTTGCGGTGCACCTGGTaGGGCAGTGTGGCGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LGNRHNDLGGGGAENKLGLRCTW*GSVAKP
Trigger: GGGCTTCGCCACACTGCCCAACCAGGTGCACCGCAA...CCCTAATTTATTCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GAAGGGCAAGGGAGGCGGATCTCTGAAGTCCCGCCCAACTTCGCTCCTGATCCCATGAGAGGCACGATGTaGACCTTCTCATGCAATGCC +
Preference number: 5 (lower is better)
Translates to: EGQGRRISEVPPNFAPDPMRGTM*TFSCNA
Trigger: GGCATTGCATGAGAAGGTCAACATCGTGCCTCTCAT...GGGATCAGGAGCGAAGTTGGGCGGGACTTCAGAGATCCGCCTCCCTTGCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp TGGGGCTCTCCATGCGGCTGTCCTGGGTCAGTTTGCTGGTCATCTGCTGGATGCACAAGACAGTCAGCTTaGGCGATGAGAGGCACGATG +
Preference number: 5 (lower is better)
Translates to: WGSPCGCPGSVCWSSAGCTRQSA*AMRGTM
Trigger: CATCGTGCCTCTCATCGCCAAAGCTGACTGTCTTGT...GCATCCAGCAGATGACCAGCAAACTGACCCAGGACAGCCGCATGGAGAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406172.6
CDS-3UTR CAA 90 bp CGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCCTGTCCTGGGTCAGTTaGCTGGTCATCTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: RKKTEHRVAGRDHAGGNILSWVS*LVICWM
Trigger: CATCCAGCAGATGACCAGCAAACTGACCCAGGACAG...GATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACATCGGCTGTCCTGGGTCAGTTaGCTGGTCATCTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: EENGASCGGKGSCGWEHRLSWVS*LVICWM
Trigger: CATCCAGCAGATGACCAGCAAACTGACCCAGGACAG...CCGATGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp CACCAACATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGACAGCACTCGGTGTTGTaGACAGCGTCCCCGAATCCC +
Preference number: 5 (lower is better)
Translates to: HQHCSPVTRTGRGIHNGRQHSVL*TASPNP
Trigger: GGGATTCGGGGACGCTGTCAACAACACCGAGTGCTG...TCTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp AGGACGCGGCATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATTTCCAGCACTCGGTGTaGTTGACAGCGTCCCCGAAT +
Preference number: 5 (lower is better)
Translates to: RTRHSQRKKTEHRVAGRDFQHSV*LTASPN
Trigger: ATTCGGGGACGCTGTCAACAACACCGAGTGCTGGAA...ATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAATGCCGCGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp AACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGGGAACACTGTCCTGGGTCAGTTaGCTGGTCATCTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: NGRKRSIVWREGIMRVGTLSWVS*LVICWM
Trigger: CATCCAGCAGATGACCAGCAAACTGACCCAGGACAG...TGTTCCCACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp TTCACCAACATTGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAGTCGCCAGCTTGCTCTaGTACCGCAGGCCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: FTNIVLLSPGQDAAFTTEVASLL*YRRPVL
Trigger: GAGCACAGGCCTGCGGTACAAGAGCAAGCTGGCGAC...TTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTTGGTGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406172.6
ENST00000455784.7
CDS-3UTR CAA 90 bp ATTCACAACGGAAGAAAACGGAGCATCGTGTGGCGGGAAGGGATCATGCGGGTGTTCCAGCACTCGGTGTaGTTGACAGCGTCCCCGAAT +
Preference number: 5 (lower is better)
Translates to: IHNGRKRSIVWREGIMRVFQHSV*LTASPN
Trigger: ATTCGGGGACGCTGTCAACAACACCGAGTGCTGGAA...CACCCGCATGATCCCTTCCCGCCACACGATGCTCCGTTTTCTTCCGTTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS-3UTR CAA 90 bp GGAAACAGACACAATGACCTGGGAGGGGGTGGTGCTGAGAATAAATTAGGGTCAACAAGACAGTCAGCTTaGGCGATGAGAGGCACGATG +
Preference number: 5 (lower is better)
Translates to: GNRHNDLGGGGAENKLGSTRQSA*AMRGTM
Trigger: CATCGTGCCTCTCATCGCCAAAGCTGACTGTCTTGT...TGACCCTAATTTATTCTCAGCACCACCCCCTCCCAGGTCATTGTGTCTGTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000438754.6
ENST00000455784.7
CDS CAA 90 bp AGAGACGGCCCCGCCCGCCGTCGCCGGGAAACGGTCGCCTGGAAATaGGGCCGCGGGCGGAGCCACCCGAAAGCGGCTGCGGAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: RDGPARRRRETVAWK*GRGRSHPKAAAEGR
Trigger: CCTGCCCTCCGCAGCCGCTTTCGGGTGGCTCCGCCCGCGGCCCAATTTCCAGGCGACCGTTTCCCGGCGACGGCGGGCGGGGCCGTCTCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490204.1
CDS GCA 72 bp AGCCGCCTCTGGGCCTGGGTCCGCGGCGACAGCAGCTaGTCCACCAGGCGGTCCTGGGGCGCTGCCAGCGAG +
Preference number: 6 (lower is better)
Translates to: SRLWAWVRGDSS*STRRSWGAASE
Trigger: CTCGCTGGCAGCGCCCCAGGACCGCCTGGTGGAGCAGCTGCTGTCGCCGCGGACCCAGGCCCAGAGGCGGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383045.7
ENST00000438754.6
ENST00000490204.1
CDS GCA 72 bp GCCCCGCCCCTGCCACGCCCGCACCGACCACAGTGCTaGGGCCTGGCCAGAAATAGCCCAGAGGCCGCGCGG +
Preference number: 6 (lower is better)
Translates to: APPLPRPHRPQC*GLARNSPEAAR
Trigger: CCGCGCGGCCTCTGGGCTATTTCTGGCCAGGCCGCAGCACTGTGGTCGGTGCGGGCGTGGCAGGGGCGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS GCA 72 bp GCCGCCCCGCCCCTGCCACGCCCGCACCGACCACAGTaGTGCGGCCTGGCCAGAAATAGCCCAGAGGCCGCG +
Preference number: 6 (lower is better)
Translates to: AAPPLPRPHRPQ*CGLARNSPEAA
Trigger: CGCGGCCTCTGGGCTATTTCTGGCCAGGCCGCAGCACTGTGGTCGGTGCGGGCGTGGCAGGGGCGGGGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS CCA 72 bp CCGCCCGCCGTCGCCGGGAAACGGTCGCCTGGAAATTaGGCCGCGGGCGGAGCCACCCGAAAGCGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: PPAVAGKRSPGN*AAGGATRKRLR
Trigger: CCGCAGCCGCTTTCGGGTGGCTCCGCCCGCGGCCCAATTTCCAGGCGACCGTTTCCCGGCGACGGCGGGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490204.1
CDS CCA 72 bp GACGGCCCCGCCCGCCGTCGCCGGGAAACGGTCGCCTaGAAATTGGGCCGCGGGCGGAGCCACCCGAAAGCG +
Preference number: 6 (lower is better)
Translates to: DGPARRRRETVA*KLGRGRSHPKA
Trigger: CGCTTTCGGGTGGCTCCGCCCGCGGCCCAATTTCCAGGCGACCGTTTCCCGGCGACGGCGGGCGGGGCCGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490204.1
CDS CCA 72 bp GCGGACCTGCGAGGCCGCTTGAGCCGCCTCTGGGCCTaGGTCCGCGGCGACAGCAGCTGCTCCACCAGGCGG +
Preference number: 6 (lower is better)
Translates to: ADLRGRLSRLWA*VRGDSSCSTRR
Trigger: CCGCCTGGTGGAGCAGCTGCTGTCGCCGCGGACCCAGGCCCAGAGGCGGCTCAAGCGGCCTCGCAGGTCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490204.1
CDS CAA 72 bp CCCGCCCGCCGTCGCCGGGAAACGGTCGCCTGGAAATaGGGCCGCGGGCGGAGCCACCCGAAAGCGGCTGCG +
Preference number: 6 (lower is better)
Translates to: PARRRRETVAWK*GRGRSHPKAAA
Trigger: CGCAGCCGCTTTCGGGTGGCTCCGCCCGCGGCCCAATTTCCAGGCGACCGTTTCCCGGCGACGGCGGGCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490204.1
CDS CCA 72 bp CCCTGCCACGCCCGCACCGACCACAGTGCTGCGGCCTaGCCAGAAATAGCCCAGAGGCCGCGCGGACGCGCG +
Preference number: 6 (lower is better)
Translates to: PCHARTDHSAAA*PEIAQRPRGRA
Trigger: CGCGCGTCCGCGCGGCCTCTGGGCTATTTCTGGCCAGGCCGCAGCACTGTGGTCGGTGCGGGCGTGGCAGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS CCA 72 bp CGAGGCCGACCGAGCCATCCCCCTGACTGGGCGAACTaGCCCCAAGCTGTGGCGGCGTCGCAGTCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: RGRPSHPPDWAN*PQAVAASQSGQ
Trigger: CTGCCCGGACTGCGACGCCGCCACAGCTTGGGGCCAGTTCGCCCAGTCAGGGGGATGGCTCGGTCGGCCTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383045.7
ENST00000438754.6
ENST00000490204.1
CDS CCA 72 bp TCGCCAGCTTGCTCTTGTACCGCAGGCCTGTGCTCATaGTGGCCGCCGGCGGGGGACGTGCGGGGCGGGCTC +
Preference number: 6 (lower is better)
Translates to: SPACSCTAGLCS*WPPAGDVRGGL
Trigger: GAGCCCGCCCCGCACGTCCCCCGCCGGCGGCCACCATGAGCACAGGCCTGCGGTACAAGAGCAAGCTGGCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS CAA 90 bp CCCAGGCCCGGTCAGGCCGCCAGAGCCCGGCGACAGCGAGGGACCTaGGCGCGGCTCTGCCTTAGGCTGCGTTGTCCACCCCGTTTTGCG +
Preference number: 6 (lower is better)
Translates to: PRPGQAARARRQRGT*ARLCLRLRCPPRFA
Trigger: CGCAAAACGGGGTGGACAACGCAGCCTAAGGCAGAGCCGCGCCAAGGTCCCTCGCTGTCGCCGGGCTCTGGCGGCCTGACCGGGCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383045.7
ENST00000438754.6
ENST00000490204.1
CDS CCA 72 bp GTCAGGCCGCCAGAGCCCGGCGACAGCGAGGGACCTTaGCGCGGCTCTGCCTTAGGCTGCGTTGTCCACCCC +
Preference number: 6 (lower is better)
Translates to: VRPPEPGDSEGP*RGSALGCVVHP
Trigger: GGGGTGGACAACGCAGCCTAAGGCAGAGCCGCGCCAAGGTCCCTCGCTGTCGCCGGGCTCTGGCGGCCTGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383045.7
ENST00000438754.6
ENST00000490204.1
CDS CAA 72 bp GGTCAGGCCGCCAGAGCCCGGCGACAGCGAGGGACCTaGGCGCGGCTCTGCCTTAGGCTGCGTTGTCCACCC +
Preference number: 6 (lower is better)
Translates to: GQAARARRQRGT*ARLCLRLRCPP
Trigger: GGGTGGACAACGCAGCCTAAGGCAGAGCCGCGCCAAGGTCCCTCGCTGTCGCCGGGCTCTGGCGGCCTGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383045.7
ENST00000438754.6
ENST00000490204.1
CDS CAA 90 bp CCGGCGGCAGCGCCGTCAGGTTGTTGCCGGTCAGCACCAGCTCGGTaGTGTCGACAGGGAAGGCGGTCGGCAGCGAGGCCCAAGTCAGCC +
Preference number: 6 (lower is better)
Translates to: PAAAPSGCCRSAPAR*CRQGRRSAARPKSA
Trigger: GGCTGACTTGGGCCTCGCTGCCGACCGCCTTCCCTGTCGACACAACCGAGCTGGTGCTGACCGGCAACAACCTGACGGCGCTGCCGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS CCA 72 bp AGGGGCGAGGTCTGGCTCGCGGCTGGGGCGCGCACCTaGTCATCTGCTGGATGCAGTGCGCGCGGTAGTTCT +
Preference number: 6 (lower is better)
Translates to: RGEVWLAAGART*SSAGCSARGSS
Trigger: AGAACTACCGCGCGCACTGCATCCAGCAGATGACCAGGTGCGCGCCCCAGCCGCGAGCCAGACCTCGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS CCA 72 bp ACGAAGTCGCAATGCGCCTGGTTCTCCACTGCGGGGTaGGGGTGGGTAGTGGGCTGGCGCCGGCCCAGGACA +
Preference number: 6 (lower is better)
Translates to: TKSQCAWFSTAG*GWVVGWRRPRT
Trigger: TGTCCTGGGCCGGCGCCAGCCCACTACCCACCCCCACCCCGCAGTGGAGAACCAGGCGCATTGCGACTTCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480423.5
CDS CAA 90 bp TACAGTCGGCCCCGGACCCGCTGCCCCTTGGCCTCCACCACCGTGTaGCTGCCTATAACGGCGAAGGGCGCGCTCTCCTTCAGTTCCCGG +
Preference number: 6 (lower is better)
Translates to: YSRPRTRCPLASTTV*LPITAKGALSFSSR
Trigger: CCGGGAACTGAAGGAGAGCGCGCCCTTCGCCGTTATAGGCAGCAACACGGTGGTGGAGGCCAAGGGGCAGCGGGTCCGGGGCCGACTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000383045.7
ENST00000406395.5
ENST00000412544.5
ENST00000431124.5
ENST00000438754.6
ENST00000455784.7
ENST00000470814.1
ENST00000480423.5
CDS GCA 72 bp AGAGCCCGGCGACAGCGAGGGACCTTGGCGCGGCTCTaGCTTAGGCTGCGTTGTCCACCCCGTTTTGCGGAC +
Preference number: 6 (lower is better)
Translates to: RARRQRGTLARL*LRLRCPPRFAD
Trigger: GTCCGCAAAACGGGGTGGACAACGCAGCCTAAGGCAGAGCCGCGCCAAGGTCCCTCGCTGTCGCCGGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383045.7
ENST00000438754.6
ENST00000490204.1
CDS GCA 72 bp CTCGCGGCTGGGGCGCGCACCTGGTCATCTGCTGGATaGAGTGCGCGCGGTAGTTCTCGTAGTGCACGTCGC +
Preference number: 6 (lower is better)
Translates to: LAAGARTWSSAG*SARGSSRSARR
Trigger: GCGACGTGCACTACGAGAACTACCGCGCGCACTGCATCCAGCAGATGACCAGGTGCGCGCCCCAGCCGCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS GCA 72 bp GAGCCCATGGCGAGAAGACGGCAGCCCGGCTTACTCTaGAGCGGGAGGCGTAGGCGGGAGAGCCGAGCGATA +
Preference number: 6 (lower is better)
Translates to: EPMARRRQPGLL*SGRRRRESRAI
Trigger: TATCGCTCGGCTCTCCCGCCTACGCCTCCCGCTGCAGAGTAAGCCGGGCTGCCGTCTTCTCGCCATGGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS GCA 72 bp GACAGCGAGGGACCTTGGCGCGGCTCTGCCTTAGGCTaGGTTGTCCACCCCGTTTTGCGGACGCGGGAAGTG +
Preference number: 6 (lower is better)
Translates to: DSEGPWRGSALG*VVHPVLRTREV
Trigger: CACTTCCCGCGTCCGCAAAACGGGGTGGACAACGCAGCCTAAGGCAGAGCCGCGCCAAGGTCCCTCGCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383045.7
ENST00000438754.6
ENST00000490204.1
CDS CCA 72 bp TACTGCTTGTCAATGTCCTTGAGCCGCCTCTGGGCCTaGGTCCGCGGCGACAGCAGCTGCTCCACCAGGCGG +
Preference number: 6 (lower is better)
Translates to: YCLSMSLSRLWA*VRGDSSCSTRR
Trigger: CCGCCTGGTGGAGCAGCTGCTGTCGCCGCGGACCCAGGCCCAGAGGCGGCTCAAGGACATTGACAAGCAGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS CCA 72 bp ACCCTTGGCAGCCAGGACCCTCGTCCTCATCCATCTTaGTGCCTTGGCCCTACCCCCAGGGGACCCACACCG +
Preference number: 6 (lower is better)
Translates to: TLGSQDPRPHPS*CLGPTPRGPTP
Trigger: CGGTGTGGGTCCCCTGGGGGTAGGGCCAAGGCACCAAGATGGATGAGGACGAGGGTCCTGGCTGCCAAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477238.1
CDS CAA 72 bp GCAGCCAGGACCCTCGTCCTCATCCATCTTGGTGCCTaGGCCCTACCCCCAGGGGACCCACACCGCGAGAAC +
Preference number: 6 (lower is better)
Translates to: AARTLVLIHLGA*ALPPGDPHREN
Trigger: GTTCTCGCGGTGTGGGTCCCCTGGGGGTAGGGCCAAGGCACCAAGATGGATGAGGACGAGGGTCCTGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477238.1
CDS CAA 90 bp TGCTTGTCAATGTCCTGCTTGTCCTCTGGGGTCGCCAGCTTGCTCTaGTACCGCAGGCCTGTGCTCATGGTGGCCGCCGGCGGGGGACGT +
Preference number: 6 (lower is better)
Translates to: CLSMSCLSSGVASLL*YRRPVLMVAAGGGR
Trigger: ACGTCCCCCGCCGGCGGCCACCATGAGCACAGGCCTGCGGTACAAGAGCAAGCTGGCGACCCCAGAGGACAAGCAGGACATTGACAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS CAA 90 bp ACGTACTGCTTGTCAATGTCCTGCTTGTCCTCTGGGGTCGCCAGCTaGCTCTTGTACCGCAGGCCTGTGCTCATGGTGGCCGCCGGCGGG +
Preference number: 6 (lower is better)
Translates to: TYCLSMSCLSSGVAS*LLYRRPVLMVAAGG
Trigger: CCCGCCGGCGGCCACCATGAGCACAGGCCTGCGGTACAAGAGCAAGCTGGCGACCCCAGAGGACAAGCAGGACATTGACAAGCAGTACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS CAA 90 bp TCACCCTTGGCAGCCAGGACCCTCGTCCTCATCCATCTTGGTGCCTaGGCCCTACCCCCAGGGGACCCACACCGCGAGAACAGAACAGTG +
Preference number: 6 (lower is better)
Translates to: SPLAARTLVLIHLGA*ALPPGDPHRENRTV
Trigger: CACTGTTCTGTTCTCGCGGTGTGGGTCCCCTGGGGGTAGGGCCAAGGCACCAAGATGGATGAGGACGAGGGTCCTGGCTGCCAAGGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477238.1
CDS GCA 72 bp TGCACCTGGTTGGGCAGTGTGGCGAAGCCCACGTACTaGTTGTCAATGTCCTTGAGCCGCCTCTGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: CTWLGSVAKPTY*LSMSLSRLWAW
Trigger: CCAGGCCCAGAGGCGGCTCAAGGACATTGACAAGCAGTACGTGGGCTTCGCCACACTGCCCAACCAGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383045.7
ENST00000438754.6
CDS GCA 72 bp CGCTCTCAGGGGCACACGGAGCACTCGGACACCCGCTaGGACGTTCACCAACATTGTTCTCCTGTCACCAGG +
Preference number: 6 (lower is better)
Translates to: RSQGHTEHSDTR*DVHQHCSPVTR
Trigger: CCTGGTGACAGGAGAACAATGTTGGTGAACGTCGCAGCGGGTGTCCGAGTGCTCCGTGTGCCCCTGAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS CAA 90 bp GGGGCACACGGAGCACTCGGACACCCGCTGCGACGTTCACCAACATaGTTCTCCTGTCACCAGGACAGGACGCGGCATTCACAACGGAAG +
Preference number: 6 (lower is better)
Translates to: GAHGALGHPLRRSPT*FSCHQDRTRHSQRK
Trigger: CTTCCGTTGTGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTTGGTGAACGTCGCAGCGGGTGTCCGAGTGCTCCGTGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS GCA 72 bp TGCACCTGGTTGGGCAGTGTGGCGAAGCCCACGTACTaGTTGTCAATGTCCTGCTTGTCCTCTGGGGTCGCC +
Preference number: 6 (lower is better)
Translates to: CTWLGSVAKPTY*LSMSCLSSGVA
Trigger: GGCGACCCCAGAGGACAAGCAGGACATTGACAAGCAGTACGTGGGCTTCGCCACACTGCCCAACCAGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS GCA 72 bp TGCACCTGGTTGGGCAGTGTGGCGAAGCCCACGTACTaGTTGTCAATGTCCTGCTTGTCCTCTGCGGGGTCG +
Preference number: 6 (lower is better)
Translates to: CTWLGSVAKPTY*LSMSCLSSAGS
Trigger: CGACCCCGCAGAGGACAAGCAGGACATTGACAAGCAGTACGTGGGCTTCGCCACACTGCCCAACCAGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412544.5
CDS CCA 72 bp TACCCCCAGGGGACCCACACCGCGAGAACAGAACAGTaGGAGCTGGACCTGAAAGGGAGTCCTTGGAGAGGT +
Preference number: 6 (lower is better)
Translates to: YPQGTHTARTEQ*ELDLKGSPWRG
Trigger: ACCTCTCCAAGGACTCCCTTTCAGGTCCAGCTCCCACTGTTCTGTTCTCGCGGTGTGGGTCCCCTGGGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477238.1
CDS CAA 72 bp ACCTGGTTGGGCAGTGTGGCGAAGCCCACGTACTGCTaGTCAATGTCCTGCTTGTCCTCTGGGGTCGCCAGC +
Preference number: 6 (lower is better)
Translates to: TWLGSVAKPTYC*SMSCLSSGVAS
Trigger: GCTGGCGACCCCAGAGGACAAGCAGGACATTGACAAGCAGTACGTGGGCTTCGCCACACTGCCCAACCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS CAA 90 bp TTGCGGTGCACCTGGTTGGGCAGTGTGGCGAAGCCCACGTACTGCTaGTCAATGTCCTGCTTGTCCTCTGGGGTCGCCAGCTTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: LRCTWLGSVAKPTYC*SMSCLSSGVASLLL
Trigger: CAAGAGCAAGCTGGCGACCCCAGAGGACAAGCAGGACATTGACAAGCAGTACGTGGGCTTCGCCACACTGCCCAACCAGGTGCACCGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS GCA 72 bp TGCACCTGGTTGGGCAGTGTGGCGAAGCCCACGTACTaGTTGTCAATGTCCTGGGGACAGGATGGAACAGGG +
Preference number: 6 (lower is better)
Translates to: CTWLGSVAKPTY*LSMSWGQDGTG
Trigger: CCCTGTTCCATCCTGTCCCCAGGACATTGACAAGCAGTACGTGGGCTTCGCCACACTGCCCAACCAGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395109.6
ENST00000477238.1
CDS CAA 72 bp TTGTCAATGTCCTGCTTGTCCTCTGGGGTCGCCAGCTaGCTCTTGTACCGCAGGCCTGTGCTCATGGTGGCC +
Preference number: 6 (lower is better)
Translates to: LSMSCLSSGVAS*LLYRRPVLMVA
Trigger: GGCCACCATGAGCACAGGCCTGCGGTACAAGAGCAAGCTGGCGACCCCAGAGGACAAGCAGGACATTGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406172.6
ENST00000406395.5
ENST00000455784.7
CDS CAA 72 bp GGAGCACTCGGACACCCGCTGCGACGTTCACCAACATaGTTCTCCTGTCACCAGGACAGGACGCGGCATTCA +
Preference number: 6 (lower is better)
Translates to: GALGHPLRRSPT*FSCHQDRTRHS
Trigger: TGAATGCCGCGTCCTGTCCTGGTGACAGGAGAACAATGTTGGTGAACGTCGCAGCGGGTGTCCGAGTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS TCA 72 bp CTTAGGGAATGGTGCAAAGTTCAAGTCTGGGTGGGCTaGCAGGACCGGCCCTCAGTTATGGAGACGTGGGCG +
Preference number: 6 (lower is better)
Translates to: LREWCKVQVWVG*QDRPSVMETWA
Trigger: CGCCCACGTCTCCATAACTGAGGGCCGGTCCTGTCAGCCCACCCAGACTTGAACTTTGCACCATTCCCTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS GCA 72 bp TGCACGTCGCACGTCACGTCCTTGAGGTCGTGCATATaGGTGCGGATGAGCATGTTGCGCAGCTTCACGAAG +
Preference number: 6 (lower is better)
Translates to: CTSHVTSLRSCI*VRMSMLRSFTK
Trigger: CTTCGTGAAGCTGCGCAACATGCTCATCCGCACGCATATGCACGACCTCAAGGACGTGACGTGCGACGTGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383045.7
ENST00000406172.6
ENST00000406395.5
ENST00000412544.5
ENST00000438754.6
ENST00000455784.7
ENST00000470814.1
CDS GCA 72 bp TGCACCTGGTTGGGCAGTGTGGCGAAGCCCACGTACTaGTTGTCAATGTCCAGCTCTGACCCACAGGATTGG +
Preference number: 6 (lower is better)
Translates to: CTWLGSVAKPTY*LSMSSSDPQDW
Trigger: CCAATCCTGTGGGTCAGAGCTGGACATTGACAAGCAGTACGTGGGCTTCGCCACACTGCCCAACCAGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431124.5
CDS CCA 72 bp GGGGGCTTAGGGAATGGTGCAAAGTTCAAGTCTGGGTaGGCTGACAGGACCGGCCCTCAGTTATGGAGACGT +
Preference number: 6 (lower is better)
Translates to: GGLGNGAKFKSG*ADRTGPQLWRR
Trigger: ACGTCTCCATAACTGAGGGCCGGTCCTGTCAGCCCACCCAGACTTGAACTTTGCACCATTCCCTAAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470814.1
CDS CCA 72 bp ACAGAACAGTGGGAGCTGGACCTGAAAGGGAGTCCTTaGAGAGGTCCCATGGAAGGGGACTGGGGATCAGTG +
Preference number: 6 (lower is better)
Translates to: TEQWELDLKGSP*RGPMEGDWGSV
Trigger: CACTGATCCCCAGTCCCCTTCCATGGGACCTCTCCAAGGACTCCCTTTCAGGTCCAGCTCCCACTGTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477238.1
CDS CAA 72 bp AACAGAACAGTGGGAGCTGGACCTGAAAGGGAGTCCTaGGAGAGGTCCCATGGAAGGGGACTGGGGATCAGT +
Preference number: 6 (lower is better)
Translates to: NRTVGAGPERES*ERSHGRGLGIS
Trigger: ACTGATCCCCAGTCCCCTTCCATGGGACCTCTCCAAGGACTCCCTTTCAGGTCCAGCTCCCACTGTTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477238.1
CDS CCA 72 bp TCAATGTCCACCGTGTGTTTTAGAATCTCTACCGTCTaGCTGATGCGCTCCTCAGCACTGAGCAGCTTCCGG +
Preference number: 6 (lower is better)
Translates to: SMSTVCFRISTV*LMRSSALSSFR
Trigger: CCGGAAGCTGCTCAGTGCTGAGGAGCGCATCAGCCAGACGGTAGAGATTCTAAAACACACGGTGGACATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000383045.7
ENST00000395109.6
ENST00000406172.6
ENST00000406395.5
ENST00000412544.5
ENST00000431124.5
ENST00000438754.6
ENST00000455784.7
CDS GCA 72 bp TTTCTCCAGAAGCCCAATACCCTGTCTCTTACCAAATaGGGTATGAGGAGACAGCAGAGGGTACGGTTCCCA +
Preference number: 6 (lower is better)
Translates to: FLQKPNTLSLTK*GMRRQQRVRFP
Trigger: TGGGAACCGTACCCTCTGCTGTCTCCTCATACCGCATTTGGTAAGAGACAGGGTATTGGGCTTCTGGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395109.6