RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEPTIN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000100167

Ensembl transcript IDs: ENST00000396417.2, ENST00000396425.7, ENST00000396426.7, ENST00000406029.5, ENST00000449288.5, ENST00000460267.1, ENST00000644076.1

Found 725 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGCTGCTGCTGTTCTGTCCTGACAGGTGCCTACCCTGTAACTTTGTaGGCAAGGGAGGATGAGGGCTGGGTTGGCAGCCTCCAGGAAAGA +
Preference number: 1 (lower is better)
Translates to: RCCCSVLTGAYPVTL*AREDEGWVGSLQER
Trigger: TCTTTCCTGGAGGCTGCCAACCCAGCCCTCATCCTCCCTTGCTCACAAAGTTACAGGGTAGGCACCTGTCAGGACAGAACAGCAGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR CCA 90 bp TCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAACTaGCCTAAAGAGGCAGCTGGCCCCTCCCACCTACTGAGGGCTGAG +
Preference number: 1 (lower is better)
Translates to: STGRRGVVWINGGCN*PKEAAGPSHLLRAE
Trigger: CTCAGCCCTCAGTAGGTGGGAGGGGCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR TCA 90 bp CCTGCAGCAATAACAGCTGAGAGGAATGGAGTGAGAAGCAGCGCTTaGAATGGCCTTCATTCAGCAGTGGGGCAGGGGGTGGCTGGCACA +
Preference number: 1 (lower is better)
Translates to: PAAITAERNGVRSSA*NGLHSAVGQGVAGT
Trigger: TGTGCCAGCCACCCCCTGCCCCACTGCTGAATGAAGGCCATTTCAAGCGCTGCTTCTCACTCCATTCCTCTCAGCTGTTATTGCTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396417.2
ENST00000396425.7
3UTR TCA 90 bp TCCCCTAGGCGTGGGCCTCTTGCTCCATCAGGACTTGGTTGTAGATaGATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGG +
Preference number: 1 (lower is better)
Translates to: SPRRGPLAPSGLGCR*MAHKSPAFEQVVSR
Trigger: CCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAGGCCCACGCCTAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
3UTR CCA 90 bp ACTCCCTGCCCCCTACTCAGGTCTAGCTCCACTGCCATCTGTCCTTaGAGAATCTCTATAGCCCCAGTTTGTGTGCAGGTTCCGAGAGAA +
Preference number: 1 (lower is better)
Translates to: TPCPLLRSSSTAICP*RISIAPVCVQVPRE
Trigger: TTCTCTCGGAACCTGCACACAAACTGGGGCTATAGAGATTCTCCAAGGACAGATGGCAGTGGAGCTAGACCTGAGTAGGGGGCAGGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR CCA 90 bp CTAGGCGTGGGCCTCTTGCTCCATCAGGACTTGGTTGTAGATGAATaGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGA +
Preference number: 1 (lower is better)
Translates to: LGVGLLLHQDLVVDE*PTSHQPLSKLCPGG
Trigger: TCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAGGCCCACGCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
3UTR GCA 90 bp CACAGACTGAAGGGTGGAGCTCCATTTGTAGGCACTGATGCTTTCTaGAAGAACCCAGCTCTGGCCTACTTCTCTGCCTTCTCATGGCCT +
Preference number: 1 (lower is better)
Translates to: HRLKGGAPFVGTDAF*KNPALAYFSAFSWP
Trigger: AGGCCATGAGAAGGCAGAGAAGTAGGCCAGAGCTGGGTTCTTGCAGAAAGCATCAGTGCCTACAAATGGAGCTCCACCCTTCAGTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR GCA 90 bp AACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTaGGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGC +
Preference number: 1 (lower is better)
Translates to: NSSNVFLGKPLFLSG*VMRWGGCTTALWDS
Trigger: GCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR TCA 90 bp ACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCAGCAATAACAGCTaGGAGGAATGGAGTGAGAAGCAGCGCTTGAAATGGCCTTCATTC +
Preference number: 1 (lower is better)
Translates to: TSTALKRAWPCSNNS*EEWSEKQRLKWPSF
Trigger: GAATGAAGGCCATTTCAAGCGCTGCTTCTCACTCCATTCCTCTCAGCTGTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396417.2
ENST00000396425.7
3UTR GCA 90 bp CACACACACACACACACACACACACACACACACACACAGACAAGATaGTCCACAAATACCAGACAGGCCTGTGGGACAGAGTTGAGAGGA +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTHTHTQTR*STNTRQACGTELRG
Trigger: TCCTCTCAACTCTGTCCCACAGGCCTGTCTGGTATTTGTGGAGCATCTTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR CCA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTaGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGA +
Preference number: 1 (lower is better)
Translates to: SQLQQCLLRKTTLPQ*LRYEVGRMYNRTLG
Trigger: TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR CCA 90 bp CTTTGTTTTGGGACACAAGGAAAGGAGACAGATAATGGACAGGCATaGAGGAGCCAAACTTACAAGGGACTCTCCAGGGAGGGCAGTGAA +
Preference number: 1 (lower is better)
Translates to: LCFGTQGKETDNGQA*RSQTYKGLSREGSE
Trigger: TTCACTGCCCTCCCTGGAGAGTCCCTTGTAAGTTTGGCTCCTCCATGCCTGTCCATTATCTGTCTCCTTTCCTTGTGTCCCAAAACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR TCA 90 bp GAACTGCATAACTCACTGTGTTTCCCTCTTTACATTGGCTGCCTGTaGGCTCAGGGCCTGTTCAGGTGCTTGACTACAGAAACTTTCTTT +
Preference number: 1 (lower is better)
Translates to: ELHNSLCFPLYIGCL*AQGLFRCLTTETFF
Trigger: AAAGAAAGTTTCTGTAGTCAAGCACCTGAACAGGCCCTGAGCTCACAGGCAGCCAATGTAAAGAGGGAAACACAGTGAGTTATGCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR TCA 90 bp AGCAAATGGAGCAACAGAGAAGCCTGCTTAGAAGGGAGAGAAGTCTaGCGGAGAAAACGGAGGTGTGGTCAAAAATTTGTCTTTGAAGCC +
Preference number: 1 (lower is better)
Translates to: SKWSNREACLEGREV*RRKRRCGQKFVFEA
Trigger: GGCTTCAAAGACAAATTTTTGACCACACCTCCGTTTTCTCCGTCAGACTTCTCTCCCTTCTAAGCAGGCTTCTCTGTTGCTCCATTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR TCA 90 bp ATTATAAGTGCTGGGATTCATAGAGGACCAGTGAAACACCTAGGCTaGACCAGGAGATGGGACAGAAGGTTGTATGAGGTTATTGTAAAC +
Preference number: 1 (lower is better)
Translates to: IISAGIHRGPVKHLG*TRRWDRRLYEVIVN
Trigger: GTTTACAATAACCTCATACAACCTTCTGTCCCATCTCCTGGTTCAGCCTAGGTGTTTCACTGGTCCTCTATGAATCCCAGCACTTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR TCA 90 bp GCTAAATATAGGAATGAACCTAAAGTAGATTCATCTAAAAGGAAGTaGGAGATGTCAGAGACACGCAGGAGAGGGAGAGAAAGCAATGTA +
Preference number: 1 (lower is better)
Translates to: AKYRNEPKVDSSKRK*EMSETRRRGRESNV
Trigger: TACATTGCTTTCTCTCCCTCTCCTGCGTGTCTCTGACATCTCTCACTTCCTTTTAGATGAATCTACTTTAGGTTCATTCCTATATTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR TCA 90 bp ACCCAGATTTCTCTGGCAATCTGTTTGTACTGTCCTGTAGTTTTGTaGTTTTATGTGAAAGGCAGTCTAAAGTCATTTCTGGAAGTAGAC +
Preference number: 1 (lower is better)
Translates to: TQISLAICLYCPVVL*FYVKGSLKSFLEVD
Trigger: GTCTACTTCCAGAAATGACTTTAGACTGCCTTTCACATAAAATCACAAAACTACAGGACAGTACAAACAGATTGCCAGAGAAATCTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CCA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGGAGAAGAGTTGCCTGTaGCTCACCTGCTCCCAGCAC +
Preference number: 2 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQEKSCL*LTCSQH
Trigger: GTGCTGGGAGCAGGTGAGCCACAGGCAACTCTTCTC...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR TCA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAACTCCAGGGAGGGCAGTaGAAATACCTCACCCCTGCA +
Preference number: 2 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQLQGGQ*KYLTPA
Trigger: TGCAGGGGTGAGGTATTTTCACTGCCCTCCCTGGAG...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR TCA 90 bp TGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGCCTGTGGGACAGAGTTaGGAGGAAGAAGGTGGTTGG +
Preference number: 2 (lower is better)
Translates to: CTGRTPLHWEERSGLDKWPVGQS*EEEGGW
Trigger: CCAACCACCTTCTTCCTCTCAACTCTGTCCCACAGG...CCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CCA 90 bp GCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGCTCTTGCCATTCACTTaGTACTCCTTGTCACTTCCC +
Preference number: 2 (lower is better)
Translates to: ADDAVGLYWQNPTPLGGELLPFT*YSLSLP
Trigger: GGGAAGTGACAAGGAGTACCAAGTGAATGGCAAGAG...CTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396417.2
3UTR CAA 90 bp TTGTTCTTGCATCCCCTAGGCGTGGGCCTCTTGCTCCATCAGGACTaGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTTTGAGCAAG +
Preference number: 2 (lower is better)
Translates to: LFLHPLGVGLLLHQD*VVDEWPTSHQPLSK
Trigger: CTTGCTCAAAGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAGGCCCACGCCTAGGGGATGCAAGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
3UTR-3UTR TCA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAAGGGAGAGAAGTCTaGCGGAGAAAACGGAGGTGT +
Preference number: 2 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQEEGREV*RRKRRC
Trigger: ACACCTCCGTTTTCTCCGTCAGACTTCTCTCCCTTC...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CCA 90 bp CTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGTGAGGGCAAACTCACAGTaGTTGAGGTTTTCCACTTCG +
Preference number: 2 (lower is better)
Translates to: LRYEVGRMYNRTLGQPQVRANSQ*LRFSTS
Trigger: CGAAGTGGAAAACCTCAACCACTGTGAGTTTGCCCT...CACTTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396417.2
3UTR CAA 90 bp CATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTTaGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: HQDLVVDEWPTSHQP*SKLCPGGDRKRVGK
Trigger: TTTGCCCACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
3UTR-3UTR GCA 90 bp GTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCAGCAATAACTTCTGTCCTGACAGGTaGCTACCCTGTAACTTTGTG +
Preference number: 2 (lower is better)
Translates to: VVSWTSTALKRAWPCSNNFCPDR*LPCNFV
Trigger: CACAAAGTTACAGGGTAGGCACCTGTCAGGACAGAA...GTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR GCA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAAAAGGCATGCTCTCCTaGCTGATTTTGTCATTCTCC +
Preference number: 2 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQKGMLS*LILSFS
Trigger: GGAGAATGACAAAATCAGGCAGGAGAGCATGCCTTT...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396417.2
3UTR-3UTR CCA 90 bp CTCTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGAGGAGAGGAGTGGTTTaGATAAATGGAGGATGCAAC +
Preference number: 2 (lower is better)
Translates to: LFLSGCVMRWGGCTTALWRRGVV*INGGCN
Trigger: GTTGCATCCTCCATTTATCCAAACCACTCCTCTCCT...CCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR CAA 90 bp CATTTAAGAAACGGGTTGTTCTTGCATCCCCTAGGCGTGGGCCTCTaGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCAC +
Preference number: 2 (lower is better)
Translates to: HLRNGLFLHPLGVGL*LHQDLVVDEWPTSH
Trigger: GTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAGGCCCACGCCTAGGGGATGCAAGAACAACCCGTTTCTTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
3UTR-3UTR TCA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGAGCATGCTCTCCTGCCTaGTTTTGTCATTCTCCGTCT +
Preference number: 2 (lower is better)
Translates to: TRAEGALDEFFHPADGLGACSPA*FCHSPS
Trigger: AGACGGAGAATGACAAAATCAGGCAGGAGAGCATGC...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396417.2
3UTR-3UTR GCA 90 bp AAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAACATTCGCTTCCGAGAGAAGAGTTaGCTGTGGCTCACCTGCTCC +
Preference number: 2 (lower is better)
Translates to: KGEFYKDTVCGAVAVNIRFREKS*LWLTCS
Trigger: GGAGCAGGTGAGCCACAGGCAACTCTTCTCTCGGAA...GCGAATGTTGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR TCA 90 bp TCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGGGAACACGACACAGACTaGAGGGTGGAGCTCCATTTG +
Preference number: 2 (lower is better)
Translates to: SSNVFLGKPLFLSGCVMREHDTD*RVELHL
Trigger: CAAATGGAGCTCCACCCTTCAGTCTGTGTCGTGTTC...CCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR TCA 90 bp CTCTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGAAAAATTGCTTTCTTaGCCCTTTAAGGAAGCCAAG +
Preference number: 2 (lower is better)
Translates to: LFLSGCVMRWGGCTTALWEKLLS*PFKEAK
Trigger: CTTGGCTTCCTTAAAGGGTCAAGAAAGCAATTTTTC...CCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR-3UTR GCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTAAAATACCTCACCCCTaGATGCACACACACAGGCTC +
Preference number: 2 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSKIPHP*MHTHRL
Trigger: GAGCCTGTGTGTGTGCATGCAGGGGTGAGGTATTTT...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR GCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTCACGAGTGTCAGGGATaGGTTTCTTCCTGGCGATGT +
Preference number: 2 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALHECQG*VSSWRC
Trigger: ACATCGCCAGGAAGAAACGCATCCCTGACACTCGTG...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396417.2
3UTR-3UTR TCA 90 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATTGCTGAGTGGACAGAAGTCATCTAAAAGGAAGTaGGAGATGTCAGAGACACGC +
Preference number: 2 (lower is better)
Translates to: GVGRVGGKRSLLLLSGQKSSKRK*EMSETR
Trigger: GCGTGTCTCTGACATCTCTCACTTCCTTTTAGATGA...CTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR TCA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAATCCTATTCCTTTCTTTaGCCCAGATTTCTCTGGCAA +
Preference number: 2 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQESYSFL*PRFLWQ
Trigger: TTGCCAGAGAAATCTGGGTCAAAGAAAGGAATAGGA...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR TCA 90 bp CTCTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGAGTGACCCACCCTCATaGATATCTTTAAGTAATGAA +
Preference number: 2 (lower is better)
Translates to: LFLSGCVMRWGGCTTALWSDPPS*ISLSNE
Trigger: TTCATTACTTAAAGATATTCATGAGGGTGGGTCACT...CCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR-3UTR GCA 90 bp CAGACATATAAAATACCTTCTCCAGGGAGGCTCAGATCATGGTTCAGGGGTGCCGTCTCCATACAGGACTaGTTCTACAGTAGCCAAGGA +
Preference number: 2 (lower is better)
Translates to: QTYKIPSPGRLRSWFRGAVSIQD*FYSSQG
Trigger: TCCTTGGCTACTGTAGAAGCAGTCCTGTATGGAGAC...GGCACCCCTGAACCATGATCTGAGCCTCCCTGGAGAAGGTATTTTATATGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CCA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGGAAGGTGGTTGGTGGTaGTATTTGGGATGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: GQKGASFSLACTYCGFLGEGGWW*YLGCVC
Trigger: ACACACACATCCCAAATACCACCACCAACCACCTTC...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CCA 90 bp CCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGATAATGGACAGGCATaGAGGAGCCAAACTTACAAG +
Preference number: 2 (lower is better)
Translates to: PLPLEMVTSSWDGLTRAEDNGQA*RSQTYK
Trigger: CTTGTAAGTTTGGCTCCTCCATGCCTGTCCATTATC...TTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAACAAACAGCTTTGTTTTaGGACACAAGGAAAGGAGAC +
Preference number: 2 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQQTALF*DTRKGD
Trigger: GTCTCCTTTCCTTGTGTCCCAAAACAAAGCTGTTTG...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR TCA 90 bp CAGACATATAAAATACCTTCTCCAGGGAGGCTCAGATCATGGTTCAGGGGTGCCGGACAGAAGGTTGTATaGGGTTATTGTAAACAGTTT +
Preference number: 2 (lower is better)
Translates to: QTYKIPSPGRLRSWFRGAGQKVV*GYCKQF
Trigger: AAACTGTTTACAATAACCTCATACAACCTTCTGTCC...GGCACCCCTGAACCATGATCTGAGCCTCCCTGGAGAAGGTATTTTATATGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR TCA 90 bp ACTGGACACTGGGAACTGCATAACTCACTGTGTTTCCCTCTTTACATTGGCTGCTGTCCTGTAGTTTTGTaGTTTTATGTGAAAGGCAGT +
Preference number: 2 (lower is better)
Translates to: TGHWELHNSLCFPLYIGCCPVVL*FYVKGS
Trigger: ACTGCCTTTCACATAAAATCACAAAACTACAGGACA...GCAGCCAATGTAAAGAGGGAAACACAGTGAGTTATGCAGTTCCCAGTGTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CCA 90 bp GTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGGCAAGAACCCAGCTCTaGCCTACTTCTCTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: VCVFSFCLFVWTEESQLQARTQL*PTSLPS
Trigger: AGAAGGCAGAGAAGTAGGCCAGAGCTGGGTTCTTGC...CTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CCA 90 bp GTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGGCTGTGGTGGTGAGCTaGACGAGCACAGCACTAAAA +
Preference number: 2 (lower is better)
Translates to: VCVFSFCLFVWTEESQLQAVVVS*TSTALK
Trigger: TTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGC...CTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR-3UTR CCA 90 bp GTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGAATGGAGGATGCAACTaGCCTAAAGAGGCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: VCVFSFCLFVWTEESQLQNGGCN*PKEAAG
Trigger: GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATT...CTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR-3UTR CCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAAGAGGAAGAAGGTGGTTaGTGGTGGTATTTGGGATGT +
Preference number: 2 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKEEEGG*WWYLGC
Trigger: ACATCCCAAATACCACCACCAACCACCTTCTTCCTC...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CCA 90 bp GTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGTTGAGAGGAAGAAGGTaGTTGGTGGTGGTATTTGGG +
Preference number: 2 (lower is better)
Translates to: VCVFSFCLFVWTEESQLQLRGRR*LVVVFG
Trigger: CCCAAATACCACCACCAACCACCTTCTTCCTCTCAA...CTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR CAA 90 bp TTGTGGGTTTCTGGGGGTTTGTGTGTGTGTTTAGTTTTTGTTTGTTaGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGA +
Preference number: 2 (lower is better)
Translates to: LWVSGGLCVCLVFVC*FGQKKVNSSNVFLG
Trigger: TCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACACAAACCCCCAGAAACCCACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR CAA 90 bp CATATTGTGGGTTTCTGGGGGTTTGTGTGTGTGTTTAGTTTTTGTTaGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTT +
Preference number: 2 (lower is better)
Translates to: HIVGFWGFVCVFSFC*FVWTEESQLQQCLL
Trigger: AAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACACAAACCCCCAGAAACCCACAATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR-3UTR TCA 90 bp GTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGGAAAAATTGCTTTCTTaGCCCTTTAAGGAAGCCAAG +
Preference number: 2 (lower is better)
Translates to: VCVFSFCLFVWTEESQLQEKLLS*PFKEAK
Trigger: CTTGGCTTCCTTAAAGGGTCAAGAAAGCAATTTTTC...CTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR CCA 72 bp GGACCGGCTGACGCAGATGATGCAGTAGGGCTGTACTaGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGG +
Preference number: 3 (lower is better)
Translates to: GPADADDAVGLY*QNPTPLGGEEW
Trigger: CCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR TCA 72 bp GGAGGCCTTCTCCCGGAGGGAGGCCTCCATTGTCATTaGGCCGCTTGGCCCTGTAAGTCTCATAGTGGATGT +
Preference number: 3 (lower is better)
Translates to: GGLLPEGGLHCH*AAWPCKSHSGC
Trigger: ACATCCACTATGAGACTTACAGGGCCAAGCGGCTCAATGACAATGGAGGCCTCCCTCCGGGAGAAGGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396417.2
3UTR GCA 72 bp ACCTTCTCCAGGGAGGCTCAGATCATGGTTCAGGGGTaGCAGGCACCATTCCTACTCAGCCTTTCCAACGCC +
Preference number: 3 (lower is better)
Translates to: TFSREAQIMVQG*QAPFLLSLSNA
Trigger: GGCGTTGGAAAGGCTGAGTAGGAATGGTGCCTGGCACCCCTGAACCATGATCTGAGCCTCCCTGGAGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR TCA 72 bp TGTTCTGTCCTGACAGGTGCCTACCCTGTAACTTTGTaGGCAAGGGAGGATGAGGGCTGGGTTGGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: CSVLTGAYPVTL*AREDEGWVGSL
Trigger: GAGGCTGCCAACCCAGCCCTCATCCTCCCTTGCTCACAAAGTTACAGGGTAGGCACCTGTCAGGACAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR CCA 72 bp GGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGGTaGGGAGGATGTACAACCGCACTCTGGGACAGCCAC +
Preference number: 3 (lower is better)
Translates to: GKPLFLSGCVMR*GGCTTALWDSH
Trigger: GTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR CCA 72 bp AGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAACTaGCCTAAAGAGGCAGCTGGCCCCTCCCACCTACTG +
Preference number: 3 (lower is better)
Translates to: RRGVVWINGGCN*PKEAAGPSHLL
Trigger: CAGTAGGTGGGAGGGGCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR-3UTR CAA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTGTTCCGAGAGAAGAGTaGCCTGTGGCTCACCTGCTC +
Preference number: 3 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPVPREE*PVAHLL
Trigger: GAGCAGGTGAGCCACAGGCAACTCTTCTCTCGGAAC...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CAA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTGCAAACTCACAGTGGTaGAGGTTTTCCACTTCGATG +
Preference number: 3 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVANSQW*RFSTSM
Trigger: CATCGAAGTGGAAAACCTCAACCACTGTGAGTTTGC...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396417.2
3UTR TCA 72 bp ATAACAGCTGAGAGGAATGGAGTGAGAAGCAGCGCTTaGAATGGCCTTCATTCAGCAGTGGGGCAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: ITAERNGVRSSA*NGLHSAVGQGV
Trigger: CACCCCCTGCCCCACTGCTGAATGAAGGCCATTTCAAGCGCTGCTTCTCACTCCATTCCTCTCAGCTGTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396417.2
ENST00000396425.7
3UTR CCA 72 bp GCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTaGATAAATGGAGGATGCAACTGGCCTAAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: AEPHSTGRRGVV*INGGCNWPKEA
Trigger: TGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR TCA 72 bp CGTGGGCCTCTTGCTCCATCAGGACTTGGTTGTAGATaGATGGCCCACAAGTCACCAGCCTTTGAGCAAGTT +
Preference number: 3 (lower is better)
Translates to: RGPLAPSGLGCR*MAHKSPAFEQV
Trigger: AACTTGCTCAAAGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAGGCCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
3UTR GCA 72 bp AAGGGTGGAGCTCCATTTGTAGGCACTGATGCTTTCTaGAAGAACCCAGCTCTGGCCTACTTCTCTGCCTTC +
Preference number: 3 (lower is better)
Translates to: KGGAPFVGTDAF*KNPALAYFSAF
Trigger: GAAGGCAGAGAAGTAGGCCAGAGCTGGGTTCTTGCAGAAAGCATCAGTGCCTACAAATGGAGCTCCACCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR CCA 72 bp CCCCTACTCAGGTCTAGCTCCACTGCCATCTGTCCTTaGAGAATCTCTATAGCCCCAGTTTGTGTGCAGGTT +
Preference number: 3 (lower is better)
Translates to: PLLRSSSTAICP*RISIAPVCVQV
Trigger: AACCTGCACACAAACTGGGGCTATAGAGATTCTCCAAGGACAGATGGCAGTGGAGCTAGACCTGAGTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CAA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGTGAGGCAAACAGCTTaGTTTTGGGACACAAGGAAA +
Preference number: 3 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQVRQTA*FWDTRK
Trigger: TTTCCTTGTGTCCCAAAACAAAGCTGTTTGCCTCAC...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CAA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTCTCTATAGCCCCAGTTaGTGTGCAGGTTCCGAGAGA +
Preference number: 3 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPLYSPS*CAGSER
Trigger: TCTCTCGGAACCTGCACACAAACTGGGGCTATAGAG...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CAA 90 bp CTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGTGTTCCTATTCCTTTCTTaGACCCAGATTTCTCTGGCA +
Preference number: 3 (lower is better)
Translates to: LRYEVGRMYNRTLGQPQVFLFLS*TQISLA
Trigger: TGCCAGAGAAATCTGGGTCAAAGAAAGGAATAGGAA...CACTTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CAA 90 bp AGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGGCTTTACTTCAAGCTCCTaGCTGAGGTGTTTCATGAAC +
Preference number: 3 (lower is better)
Translates to: SHQPLSKLCPGGDRKRVGFTSSS*LRCFMN
Trigger: GTTCATGAAACACCTCAGCAAGGAGCTTGAAGTAAA...GCCCACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396417.2
3UTR-3UTR CAA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTCCTCTTGCCATTCACTaGGTACTCCTTGTCACTTCC +
Preference number: 3 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPPLAIH*VLLVTS
Trigger: GGAAGTGACAAGGAGTACCAAGTGAATGGCAAGAGG...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396417.2
3UTR TCA 72 bp GCACTAAAAAGGGCTTGGCCCTGCAGCAATAACAGCTaGGAGGAATGGAGTGAGAAGCAGCGCTTGAAATGG +
Preference number: 3 (lower is better)
Translates to: ALKRAWPCSNNS*EEWSEKQRLKW
Trigger: CCATTTCAAGCGCTGCTTCTCACTCCATTCCTCTCAGCTGTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR GCA 72 bp ACACACACACACACACACACACACACACAGACAAGATaGTCCACAAATACCAGACAGGCCTGTGGGACAGAG +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTQTR*STNTRQACGTE
Trigger: CTCTGTCCCACAGGCCTGTCTGGTATTTGTGGAGCATCTTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR CCA 72 bp GGCCTCTTGCTCCATCAGGACTTGGTTGTAGATGAATaGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGT +
Preference number: 3 (lower is better)
Translates to: GLLLHQDLVVDE*PTSHQPLSKLC
Trigger: ACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
3UTR-3UTR CAA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGCACTGCCATCTGTCCTaGGAGAATCTCTATAGCCCC +
Preference number: 3 (lower is better)
Translates to: GQKGASFSLACTYCGFLGHCHLS*ENLYSP
Trigger: GGGGCTATAGAGATTCTCCAAGGACAGATGGCAGTG...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR TCA 72 bp GCTGGGATTCATAGAGGACCAGTGAAACACCTAGGCTaGACCAGGAGATGGGACAGAAGGTTGTATGAGGTT +
Preference number: 3 (lower is better)
Translates to: AGIHRGPVKHLG*TRRWDRRLYEV
Trigger: AACCTCATACAACCTTCTGTCCCATCTCCTGGTTCAGCCTAGGTGTTTCACTGGTCCTCTATGAATCCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR GCA 72 bp AATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTaGGTTATGAGGTGGGGAGGATGTACAACCGCACTC +
Preference number: 3 (lower is better)
Translates to: NVFLGKPLFLSG*VMRWGGCTTAL
Trigger: GAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR CCA 72 bp GCAATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTaGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGAT +
Preference number: 3 (lower is better)
Translates to: AMPLPLEMVTSS*DGLTRAEGALD
Trigger: ATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR TCA 72 bp AGGGCTTCAGGGAAAGGCAAGAAAAGCCTAAATGTATaGCGGTGGGTATCATTGGGAATGTCTACAGGAGTC +
Preference number: 3 (lower is better)
Translates to: RASGKGKKSLNV*RWVSLGMSTGV
Trigger: GACTCCTGTAGACATTCCCAATGATACCCACCGTCATACATTTAGGCTTTTCTTGCCTTTCCCTGAAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR-3UTR CAA 90 bp ACTGGACACTGGGAACTGCATAACTCACTGTGTTTCCCTCTTTACATTGGCTGCTCTCTGGCAATCTGTTaGTACTGTCCTGTAGTTTTG +
Preference number: 3 (lower is better)
Translates to: TGHWELHNSLCFPLYIGCSLAIC*YCPVVL
Trigger: CAAAACTACAGGACAGTACAAACAGATTGCCAGAGA...GCAGCCAATGTAAAGAGGGAAACACAGTGAGTTATGCAGTTCCCAGTGTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
3UTR GCA 72 bp ACAGCTGATCTCAATGAATCTAGTAAGCAGAAAAATTaGTTTCTTGACCCTTTAAGGAAGCCAAGAGTAGCT +
Preference number: 3 (lower is better)
Translates to: TADLNESSKQKN*FLDPLRKPRVA
Trigger: AGCTACTCTTGGCTTCCTTAAAGGGTCAAGAAAGCAATTTTTCTGCTTACTAGATTCATTGAGATCAGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR TCA 72 bp TCTCTGGCAATCTGTTTGTACTGTCCTGTAGTTTTGTaGTTTTATGTGAAAGGCAGTCTAAAGTCATTTCTG +
Preference number: 3 (lower is better)
Translates to: SLAICLYCPVVL*FYVKGSLKSFL
Trigger: CAGAAATGACTTTAGACTGCCTTTCACATAAAATCACAAAACTACAGGACAGTACAAACAGATTGCCAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGCACACTCCGGGTCCTaGCTCCAAGGCCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: PADADDAVGLYWQNPTPLAHSGS*LQGPAG
Trigger: GCCGGCTGGGCCTTGGAGCCAGGACCCGGAGTGTGC...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGCCTGGGCCCTCAGAGTaGACCCTGCCCCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: PADADDAVGLYWQNPTPLPGPSE*TLPPGT
Trigger: AGTGCCAGGGGGCAGGGTCCACTCTGAGGGCCCAGG...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR TCA 90 bp GCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGGGGCTGTGGTGGTaGGCTGGACGAGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: ADDAVGLYWQNPTPLGGEEGLWW*AGRAQH
Trigger: GTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCTC...CTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp GTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGGCCGAGCGGCCCCTaGAAACGGGCCTCGCCCCTT +
Preference number: 4 (lower is better)
Translates to: VLAEPHSTGRRGVVWINGGPSGP*KRASPL
Trigger: AAGGGGCGAGGCCCGTTTGCAGGGGCCGCTCGGCCC...TCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
CDS-3UTR CCA 90 bp GATGGGCTAGGACCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCAGTGGGGCAGGGGGTaGCTGGCACAGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: DGLGPADADDAVGLYWQNQWGRG*LAQVEG
Trigger: TCCTTCCACCTGTGCCAGCCACCCCCTGCCCCACTG...GTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGGTCCTAGCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGGATGCCCGTCTCCTGTaGGGGCACACTCCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQDARLL*GHTPGP
Trigger: AGGACCCGGAGTGTGCCCCCACAGGAGACGGGCATC...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp AGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGGCCACAGGTGGCGAGCCTaGCGAGGACACCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SHQPLSKLCPGGDRKRVGHRWRA*RGHPPS
Trigger: GGAGGGAGGGTGTCCTCGCCAGGCTCGCCACCTGTG...GCCCACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp GCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGTGGCTGCGTCCGTCCTaGTCTCTGGGAGCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ADDAVGLYWQNPTPLGGEWLRPS*SLGALW
Trigger: CCAAAGGGCTCCCAGAGACCAGGACGGACGCAGCCA...CTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
CDS-3UTR CCA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGTGGCTGCGTCCGTCCTaGTCTCTGGGAGCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWWLRPS*SLGALW
Trigger: CCAAAGGGCTCCCAGAGACCAGGACGGACGCAGCCA...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
CDS-3UTR CCA 90 bp GCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGCCTCCCGGTTCCAGCTaGAGGCCTTGCGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: ADDAVGLYWQNPTPLGGEPPGSS*RPCGSL
Trigger: AAGTGAGCCGCAAGGCCTCCAGCTGGAACCGGGAGG...CTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGGGTGGCTGGCACAGGTaGAAGGACAGTGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQGGWHR*KDSAQE
Trigger: CTCCTGGGCACTGTCCTTCCACCTGTGCCAGCCACC...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGGCCAGTGGGGCAGGGGGTaGCTGGCACAGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SHQPLSKLCPGGDRKRVGQWGRG*LAQVEG
Trigger: TCCTTCCACCTGTGCCAGCCACCCCCTGCCCCACTG...GCCCACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTCAGACCTGGGTTCCCTaGGCCCTCAGAGTGGACCCT +
Preference number: 4 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVQTWVP*ALRVDP
Trigger: AGGGTCCACTCTGAGGGCCCAGGGAACCCAGGTCTG...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR TCA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTCATGTGGTCAGTCACTaGGACAAGGTGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVHVVSH*DKVPLA
Trigger: GGCCAGGGGCACCTTGTCTCAGTGACTGACCACATG...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGGGCCGAGCGGCCCCTaGAAACGGGCCTCGCCCCTT +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAGPSGP*KRASPL
Trigger: AAGGGGCGAGGCCCGTTTGCAGGGGCCGCTCGGCCC...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
CDS-3UTR GCA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAACCTCAGAGTGGACCCTaGCCCCTGGCACTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQPQSGP*PLALGS
Trigger: TGACCCTAGTGCCAGGGGGCAGGGTCCACTCTGAGG...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp AGGGGCTGTGGTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCAACGAGCCTGGCTCTaGAAGGACTGGTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: RGCGGELDEHSTKKGLALQRAWL*KDWCTL
Trigger: CAGAGTGCACCAGTCCTTGCAGAGCCAGGCTCGTTG...CAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACCCTGGCCCGGGGCTTaGCTTTTCCTGGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGPWPGA*LFLEKL
Trigger: GAGCTTCTCCAGGAAAAGGCAAGCCCCGGGCCAGGG...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp CTCTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGCCTCCCGGTTCCAGCTaGAGGCCTTGCGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: LFLSGCVMRWGGCTTALWPPGSS*RPCGSL
Trigger: AAGTGAGCCGCAAGGCCTCCAGCTGGAACCGGGAGG...CCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGAGGGAGGATGAGGGCTaGGTTGGCAGCCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWREDEG*VGSLQE
Trigger: TTCCTGGAGGCTGCCAACCCAGCCCTCATCCTCCCT...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp CAGCCTTACCCCCAGACCACCCCCAACTTACAGGAGGGTTGTCCTGAACTCCCTGGGAGGCTCAGATCATaGTTCAGGGGTGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QPYPQTTPNLQEGCPELPGRLRS*FRGARH
Trigger: GTGCCTGGCACCCCTGAACCATGATCTGAGCCTCCC...AGGGAGTTCAGGACAACCCTCCTGTAAGTTGGGGGTGGTCTGGGGGTAAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp CTCTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGCCTTCATTCAGCAGTaGGGCAGGGGGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LFLSGCVMRWGGCTTALWAFIQQ*GRGWLA
Trigger: TGCCAGCCACCCCCTGCCCCACTGCTGAATGAAGGC...CCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGGGGCTGTGGTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGGCAGTAGGGCTGTACTaGCAGAACCCCACTCCACTG +
Preference number: 4 (lower is better)
Translates to: RGCGGELDEHSTKKGLALAVGLY*QNPTPL
Trigger: CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGC...CAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAGGAGGTTCCCGGGCCTaGAGCTCCATGCGACTGCAT +
Preference number: 4 (lower is better)
Translates to: RAVLAEPHSTGRRGVVWIGGSRA*SSMRLH
Trigger: ATGCAGTCGCATGGAGCTCCAGGCCCGGGAACCTCC...TATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp AGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGGCGAGACAAGGTGCCCCTaGCCCAACGAGCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SHQPLSKLCPGGDRKRVGETRCP*PNEPGS
Trigger: AGAGCCAGGCTCGTTGGGCCAGGGGCACCTTGTCTC...GCCCACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR TCA 90 bp AGGGGCTGTGGTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCCAGCAGGTTGGAGTTaGTGCTCATGGGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: RGCGGELDEHSTKKGLALPAGWS*CSWASW
Trigger: CCATGAAGCCCATGAGCATCAACTCCAACCTGCTGG...CAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp GCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGTGTGTGTCACTTCCTTaGGGTCCTGGAGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ADDAVGLYWQNPTPLGGECVSLP*GPGGGS
Trigger: GGACCCACCTCCAGGACCTCAAGGAAGTGACACACA...CTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTGGCCTCCATTGTCATTaGGCCGCTTGGCCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVGLHCH*AAWPCK
Trigger: CTTACAGGGCCAAGCGGCTCAATGACAATGGAGGCC...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp AGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGGCGCAGCAGAGGCCAGTTaGGTGGAGAGCAGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: SHQPLSKLCPGGDRKRVGAAEAS*VESSSR
Trigger: CCTACTGCTGCTCTCCACTCAACTGGCCTCTGCTGC...GCCCACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGAGGGGCTGTGGTGGTaGGCTGGACGAGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVEGLWW*AGRAQH
Trigger: GTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCTC...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTGGGCCGAGCGGCCCCTaGAAACGGGCCTCGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRGPSGP*KRASPL
Trigger: AAGGGGCGAGGCCCGTTTGCAGGGGCCGCTCGGCCC...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
CDS-3UTR GCA 90 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATTGCTGAGTGGACAGAAGGTTCCTCCAGGGAGATaGTCCGGGCGCGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GVGRVGGKRSLLLLSGQKVPPGR*SGRGAA
Trigger: TGCAGCCCCGCGCCCGGAGCATCTCCCTGGAGGAAC...CTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396425.7
ENST00000396426.7
CDS-3UTR GCA 90 bp CTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCGGAGCTCCATGCGACTaGATCTCTGGAGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSGCVMRWGGCTTALWDSGAPCD*ISGGAG
Trigger: TCCTGCTCCTCCAGAGATGCAGTCGCATGGAGCTCC...GCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp CTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGTGGGGCCTGGAGCTCCATaGGACTGCATCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LRYEVGRMYNRTLGQPQVGPGAP*DCISGG
Trigger: TCCTCCAGAGATGCAGTCGCATGGAGCTCCAGGCCC...CACTTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGTCCGTCCTGGTCTCTaGGAGCCCTTTGGACATGAA +
Preference number: 4 (lower is better)
Translates to: PADADDAVGLYWQNPTPLVRPGL*EPFGHE
Trigger: TTCATGTCCAAAGGGCTCCCAGAGACCAGGACGGAC...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
CDS-3UTR CCA 90 bp CTCTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGCACCAGCTCTGACATaGCTGCGTCCGTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LFLSGCVMRWGGCTTALWAPALT*LRPSWS
Trigger: AGACCAGGACGGACGCAGCCATGTCAGAGCTGGTGC...CCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAACCCAGCACATGGCTATaGGAGAAGGAGGTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQPSTWL*EKEVPG
Trigger: CCCGGGAACCTCCTTCTCCCATAGCCATGTGCTGGG...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp GGGTGGGCAAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAGTCGTGTTGGCCCTTTaGAGACGCCCCCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GWAKGNSIKTQCVGQWQSVVLAL*RRPRGL
Trigger: CAGACCCCGGGGGCGTCTCCAAAGGGCCAACACGAC...TGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTTGCCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp AGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGGCGGTCTTCCCAGTGGCTaGGTCTGGGGTTACTGGCAC +
Preference number: 4 (lower is better)
Translates to: SHQPLSKLCPGGDRKRVGGLPSG*VWGYWH
Trigger: GTGCCAGTAACCCCAGACCCAGCCACTGGGAAGACC...GCCCACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR TCA 90 bp TGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGCTCAGGCACCAGCTCTaGCATGGCTGCGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: CTGRTPLHWEERSGLDKWLRHQL*HGCVRP
Trigger: AGGACGGACGCAGCCATGTCAGAGCTGGTGCCTGAG...CCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp AGGGGCTGTGGTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGTCTTCCTGGCGATGTTaGCCTCCTCCTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: RGCGGELDEHSTKKGLALSSWRC*PPPSGT
Trigger: AGTTCCTGAAGGAGGAGGTCAACATCGCCAGGAAGA...CAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGTGCTCCAGGGAGGGCAGTaGAAATACCTCACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LRYEVGRMYNRTLGQPQVLQGGQ*KYLTPA
Trigger: TGCAGGGGTGAGGTATTTTCACTGCCCTCCCTGGAG...CACTTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp AGGGGCTGTGGTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGTCAGTGGCTGCGTTATaGGGTGGGGAGGATGTACAA +
Preference number: 4 (lower is better)
Translates to: RGCGGELDEHSTKKGLALSVAAL*GGEDVQ
Trigger: TTGTACATCCTCCCCACCTCATAACGCAGCCACTGA...CAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGTCCATTAGCCTACAGTaGCCACCTGTGGTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: PADADDAVGLYWQNPTPLSISLQ*PPVVRL
Trigger: TAGCCTGACCACAGGTGGTCACTGTAGGCTAATGGA...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGCAAGTCACCAGCCTTTaGGCAAGTTGTGTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PADADDAVGLYWQNPTPLQVTSL*ASCVQV
Trigger: CACCTGGACACAACTTGCTCAAAGGCTGGTGACTTG...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGCGTGCCTGGCTGTTCTaGTGGAGAGTCAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWRAWLF*WRVKEM
Trigger: CATCTCCTTGACTCTCCATCAGAACAGCCAGGCACG...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp CAGACATATAAAATACCTTCTCCAGGGAGGCTCAGATCATGGTTCAGGGGTGCCGTTCCTCCAGGGAGATaGTCCGGGCGCGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QTYKIPSPGRLRSWFRGAVPPGR*SGRGAA
Trigger: TGCAGCCCCGCGCCCGGAGCATCTCCCTGGAGGAAC...GGCACCCCTGAACCATGATCTGAGCCTCCCTGGAGAAGGTATTTTATATGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR GCA 90 bp GCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGTTCCGAGAGAAGAGTTaGCTGTGGCTCACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ADDAVGLYWQNPTPLGGEFREKS*LWLTCS
Trigger: GGAGCAGGTGAGCCACAGGCAACTCTTCTCTCGGAA...CTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGTTGGTCTCCAAAGCCTaGGGTGTCGATGACGGTCAG +
Preference number: 4 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWLVSKA*GVDDGQ
Trigger: CTGACCGTCATCGACACCCCAGGCTTTGGAGACCAA...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTCAGTGGGGCAGGGGGTaGCTGGCACAGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPQWGRG*LAQVEG
Trigger: TCCTTCCACCTGTGCCAGCCACCCCCTGCCCCACTG...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGGGCTGCGTTATGAGGTaGGGAGGATGTACAACCGCA +
Preference number: 4 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWGCVMR*GGCTTA
Trigger: TGCGGTTGTACATCCTCCCCACCTCATAACGCAGCC...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CTCTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGTGCGCATCTGCTCGATaGTGGTGTCGATGCCGATGT +
Preference number: 4 (lower is better)
Translates to: LFLSGCVMRWGGCTTALWCASAR*WCRCRC
Trigger: ACATCGGCATCGACACCATCATCGAGCAGATGCGCA...CCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGATGCGCATCTGCTCGATaGTGGTGTCGATGCCGATGT +
Preference number: 4 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGCASAR*WCRCRC
Trigger: ACATCGGCATCGACACCATCATCGAGCAGATGCGCA...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp CTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGTGCGTGTTGACCAGCGTTaGTTTGCCCAGTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: LRYEVGRMYNRTLGQPQVRVDQR*FAQSTL
Trigger: CAGAGTGGACTGGGCAAATCAACGCTGGTCAACACG...CACTTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGCATGCTCTCCTGCCTaGTTTTGTCATTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: PADADDAVGLYWQNPTPLACSPA*FCHSPS
Trigger: AGACGGAGAATGACAAAATCAGGCAGGAGAGCATGC...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp AGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATACTCCCCCAGATCTCCTaGGTGAGGCAAACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: RAVLAEPHSTGRRGVVWILPQIS*VRQTAL
Trigger: CAAAGCTGTTTGCCTCACTCAGGAGATCTGGGGGAG...TATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGTGAGAAGCAGCGCTTaGAATGGCCTTCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: PADADDAVGLYWQNPTPLVRSSA*NGLHSA
Trigger: TGCTGAATGAAGGCCATTTCAAGCGCTGCTTCTCAC...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp ATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGGAGGGGCTGTGGTGGTaGGCTGGACGAGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: MVTSSWDGLTRAEGALDEEGLWW*AGRAQH
Trigger: GTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCTC...CTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGAGGGGCTGTGGTGGTaGGCTGGACGAGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLEGLWW*AGRAQH
Trigger: GTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCTC...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGTCAGTGGCTGCGTTATaGGGTGGGGAGGATGTACAA +
Preference number: 4 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQSVAAL*GGEDVQ
Trigger: TTGTACATCCTCCCCACCTCATAACGCAGCCACTGA...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp GATGGGCTAGGACCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCAAGTCACCAGCCTTTaGGCAAGTTGTGTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: DGLGPADADDAVGLYWQNQVTSL*ASCVQV
Trigger: CACCTGGACACAACTTGCTCAAAGGCTGGTGACTTG...GTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGGTCCTAGCCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp AGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAGGTTACTGGCACAACTaGACCCACAGCTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: RAVLAEPHSTGRRGVVWIGYWHN*THSCAH
Trigger: ATGGGCACAGCTGTGGGTTCAGTTGTGCCAGTAACC...TATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR TCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAATGTGGCCAGGTCCAGTaGGGCAGGCTCTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQCGQVQ*GRLCGS
Trigger: AGAGCCACAGAGCCTGCCTCACTGGACCTGGCCACA...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp CTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGTGGGCCGAGGACCCTCTTaGCATTCACTTGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: LRYEVGRMYNRTLGQPQVGRGPS*HSLGTP
Trigger: AGGAGTACCAAGTGAATGGCAAGAGGGTCCTCGGCC...CACTTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp AGGGGCTGTGGTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGAAAATACCTCACCCCTaGATGCACACACACAGGCTC +
Preference number: 4 (lower is better)
Translates to: RGCGGELDEHSTKKGLALKIPHP*MHTHRL
Trigger: GAGCCTGTGTGTGTGCATGCAGGGGTGAGGTATTTT...CAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR GCA 90 bp AGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGGCCTCTTCCTCAGTGGCTaGGTTATGAGGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SHQPLSKLCPGGDRKRVGLFLSG*VMRWGG
Trigger: TCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG...GCCCACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTACCCCTCCTCAGCTCCTaGTCAGCCTCCAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLPLLSS*SASRPQ
Trigger: CTGTGGCCTGGAGGCTGAGCAGGAGCTGAGGAGGGG...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTGCCCCTCACCTCCCCTaGACTCAGAGTCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPAPHLP*TQSLAM
Trigger: CATGGCCAGACTCTGAGTGCAGGGGAGGTGAGGGGC...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTAAGCCCCCAGAGCGATaGCCGTCTCCTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSKPPER*PSPVGA
Trigger: TGCCCCCACAGGAGACGGGCATCGCTCTGGGGGCTT...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp TGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGGCGATCCAGGGACCGTaGCTGGCTGTTCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: CTGRTPLHWEERSGLDKWAIQGP*LAVLME
Trigger: CTCCATCAGAACAGCCAGGCACGGTCCCTGGATCGC...CCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp CTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGTGGTCCGTCCTGGTCTCTaGGAGCCCTTTGGACATGAA +
Preference number: 4 (lower is better)
Translates to: LRYEVGRMYNRTLGQPQVVRPGL*EPFGHE
Trigger: TTCATGTCCAAAGGGCTCCCAGAGACCAGGACGGAC...CACTTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
CDS-3UTR CCA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGACCTCCCGGTTCCAGCTaGAGGCCTTGCGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: TRAEGALDEFFHPADGLGPPGSS*RPCGSL
Trigger: AAGTGAGCCGCAAGGCCTCCAGCTGGAACCGGGAGG...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGTTGAGGTCCTGGAGGTaGGTCCTGATGACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: PADADDAVGLYWQNPTPLLRSWR*VLMTKS
Trigger: AGACTTTGTCATCAGGACCCACCTCCAGGACCTCAA...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGGGGCTGTGGTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGTTGAGGTCCTGGAGGTaGGTCCTGATGACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: RGCGGELDEHSTKKGLALLRSWR*VLMTKS
Trigger: AGACTTTGTCATCAGGACCCACCTCCAGGACCTCAA...CAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTGCAAGAACCCAGCTCTaGCCTACTTCTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVARTQL*PTSLPS
Trigger: AGAAGGCAGAGAAGTAGGCCAGAGCTGGGTTCTTGC...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAAGACAGGCAGTGGCCTaGCAGCAGAGGCCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQERQAVA*QQRPVE
Trigger: CTCAACTGGCCTCTGCTGCCAGGCCACTGCCTGTCT...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAAGGTGGCTGGCACAGGTaGAAGGACAGTGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQGGWHR*KDSAQE
Trigger: CTCCTGGGCACTGTCCTTCCACCTGTGCCAGCCACC...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCGGTGGCTGGCACAGGTaGAAGGACAGTGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGGGWHR*KDSAQE
Trigger: CTCCTGGGCACTGTCCTTCCACCTGTGCCAGCCACC...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTCAGTGGGGCAGGGGGTaGCTGGCACAGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSQWGRG*LAQVEG
Trigger: TCCTTCCACCTGTGCCAGCCACCCCCTGCCCCACTG...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAAGCCTTCATTCAGCAGTaGGGCAGGGGGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQAFIQQ*GRGWLA
Trigger: TGCCAGCCACCCCCTGCCCCACTGCTGAATGAAGGC...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCGCCTTCATTCAGCAGTaGGGCAGGGGGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGAFIQQ*GRGWLA
Trigger: TGCCAGCCACCCCCTGCCCCACTGCTGAATGAAGGC...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGCACTAAAAAGGGCTTaGCCCTGCAGCAATAACAGC +
Preference number: 4 (lower is better)
Translates to: PADADDAVGLYWQNPTPLALKRA*PCSNNS
Trigger: GCTGTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGC...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCGCTGTGGTGGTGAGCTaGACGAGCACAGCACTAAAA +
Preference number: 4 (lower is better)
Translates to: LSGCVMRWGGCTTALWDSAVVVS*TSTALK
Trigger: TTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGC...GCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTAATGGAGGATGCAACTaGCCTAAAGAGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVNGGCN*PKEAAG
Trigger: GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATT...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGAAGAACCCCACTCCACTaGGAGGAGAGGAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGRTPLH*EERSGL
Trigger: CAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CTCTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGGCTGCGTTATGAGGTaGGGAGGATGTACAACCGCA +
Preference number: 4 (lower is better)
Translates to: LFLSGCVMRWGGCTTALWGCVMR*GGCTTA
Trigger: TGCGGTTGTACATCCTCCCCACCTCATAACGCAGCC...CCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTCAAGGCCCAGCCGGCTaGAGGTCTGTGGGATATGGC +
Preference number: 4 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPQGPAG*RSVGYG
Trigger: GCCATATCCCACAGACCTCCAGCCGGCTGGGCCTTG...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp TGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGGTACAAGGCTGCTGGTaGGCAGGGGGCTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: CTGRTPLHWEERSGLDKWVQGCW*AGGSRK
Trigger: CTTCCTTGAGCCCCCTGCCCACCAGCAGCCTTGTAC...CCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp GATGGGCTAGGACCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACGTGCCTGTGTCCAGTTaGGATGTGTTTGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: DGLGPADADDAVGLYWQNVPVSS*DVFGVA
Trigger: AGCCACACCAAACACATCCCAACTGGACACAGGCAC...GTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGGTCCTAGCCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp GCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGCCAGGGCTAGGTCTGTaGATCTGCTTGGCATTAGCA +
Preference number: 4 (lower is better)
Translates to: ADDAVGLYWQNPTPLGGEPGLGL*ICLALA
Trigger: TGCTAATGCCAAGCAGATCCACAGACCTAGCCCTGG...CTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGAGCCCTTTGTATTCTGTaGCCAGGTCCAGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGALCIL*PGPVRQ
Trigger: CTGCCTCACTGGACCTGGCCACAGAATACAAAGGGC...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
3UTR CAA 72 bp CATCCCCTAGGCGTGGGCCTCTTGCTCCATCAGGACTaGGTTGTAGATGAATGGCCCACAAGTCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: HPLGVGLLLHQD*VVDEWPTSHQP
Trigger: AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAGGCCCACGCCTAGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAATCTTCCTGGCGATGTTaGCCTCCTCCTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQSSWRC*PPPSGT
Trigger: AGTTCCTGAAGGAGGAGGTCAACATCGCCAGGAAGA...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGAACACGACACAGACTaGAGGGTGGAGCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQEHDTD*RVELHL
Trigger: CAAATGGAGCTCCACCCTTCAGTCTGTGTCGTGTTC...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGAGTGAAACACCTAGGCTaGACCAGGAGATGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGVKHLG*TRRWDR
Trigger: TCTGTCCCATCTCCTGGTTCAGCCTAGGTGTTTCAC...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp GCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGAGTAGCTCATGCAGATaGATGGGTAGGGAGCAATGC +
Preference number: 4 (lower is better)
Translates to: ADDAVGLYWQNPTPLGGESSSCR*MGREQC
Trigger: GCATTGCTCCCTACCCATTCATCTGCATGAGCTACT...CTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTAGTAGCTCATGCAGATaGATGGGTAGGGAGCAATGC +
Preference number: 4 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVSSSCR*MGREQC
Trigger: GCATTGCTCCCTACCCATTCATCTGCATGAGCTACT...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCTCTGGCCTTTGGACATaGATCCTCCTTTGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LSGCVMRWGGCTTALWDSSGLWT*ILLCLR
Trigger: ACGGAGACAAAGGAGGATTCATGTCCAAAGGCCAGA...GCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406029.5
CDS-3UTR GCA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAACACGAGTGTCAGGGATaGGTTTCTTCCTGGCGATGT +
Preference number: 4 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQHECQG*VSSWRC
Trigger: ACATCGCCAGGAAGAAACGCATCCCTGACACTCGTG...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATCCTCCCGGTTCCAGCTaGAGGCCTTGCGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: EMVTSSWDGLTRAEGALDPPGSS*RPCGSL
Trigger: AAGTGAGCCGCAAGGCCTCCAGCTGGAACCGGGAGG...ATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGGGGCTGTGGTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCTCTTGCCATTCACTTaGTACTCCTTGTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: RGCGGELDEHSTKKGLALLLPFT*YSLSLP
Trigger: GGGAAGTGACAAGGAGTACCAAGTGAATGGCAAGAG...CAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATATTCGATGATCCCCCATaGAGTTTTTCGGCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: RAVLAEPHSTGRRGVVWIFDDPP*SFSAED
Trigger: GTCCTCGGCCGAAAAACTCCATGGGGGATCATCGAA...TATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTGGTGGCTGGCACAGGTaGAAGGACAGTGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSGGWHR*KDSAQE
Trigger: CTCCTGGGCACTGTCCTTCCACCTGTGCCAGCCACC...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGCCTTCATTCAGCAGTaGGGCAGGGGGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLAFIQQ*GRGWLA
Trigger: TGCCAGCCACCCCCTGCCCCACTGCTGAATGAAGGC...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTGCCTTCATTCAGCAGTaGGGCAGGGGGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSAFIQQ*GRGWLA
Trigger: TGCCAGCCACCCCCTGCCCCACTGCTGAATGAAGGC...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGAAGCAGCGCTTGAAATaGCCTTCATTCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQKQRLK*PSFSSG
Trigger: CCCACTGCTGAATGAAGGCCATTTCAAGCGCTGCTT...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGCAGTAGGGCTGTACTaGCAGAACCCCACTCCACTG +
Preference number: 4 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVAVGLY*QNPTPL
Trigger: CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGC...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGAGGATCCAGTGTGTCTaGGAAGATAAGGCACACGCA +
Preference number: 4 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWRIQCV*EDKAHA
Trigger: TGCGTGTGCCTTATCTTCCCAGACACACTGGATCCT...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCATGGGTACAAGGCTGCTaGTGGGCAGGGGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAWVQGC*WAGGSR
Trigger: CCTTGAGCCCCCTGCCCACCAGCAGCCTTGTACCCA...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGCTCTGGTAGGCATGTaGTCAGTCACTGAGACAAGG +
Preference number: 4 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQALVGM*SVTETR
Trigger: CCTTGTCTCAGTGACTGACCACATGCCTACCAGAGC...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGTGTTGGTGGCCATTGTaGCTAAATGTCTGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQCWWPL*LNVWLR
Trigger: ACGCAGCCAGACATTTAGCCACAATGGCCACCAACA...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAATGGCTGCGTCCGTCCTaGTCTCTGGGAGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQWLRPS*SLGALC
Trigger: ACAAAGGGCTCCCAGAGACCAGGACGGACGCAGCCA...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR TCA 90 bp TGGCAGCAGACATATAAAATACCTTCTCCAGGGAGGCTCAGATCATGGTTCAGGCTCAGGCACCAGCTCTaGCATGGCTGCGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: WQQTYKIPSPGRLRSWFRLRHQL*HGCVRP
Trigger: AGGACGGACGCAGCCATGTCAGAGCTGGTGCCTGAG...CCTGAACCATGATCTGAGCCTCCCTGGAGAAGGTATTTTATATGTCTGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTCTCAGGCACCAGCTCTaGCATGGCTGCGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRLRHQL*HGCVRP
Trigger: AGGACGGACGCAGCCATGTCAGAGCTGGTGCCTGAG...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCTGTGTGTCACTTCCTTaGGGTCCTGGAGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGCVSLP*GPGGGS
Trigger: GGACCCACCTCCAGGACCTCAAGGAAGTGACACACA...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAAGGCCTCCATTGTCATTaGGCCGCTTGGCCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQGLHCH*AAWPCK
Trigger: CTTACAGGGCCAAGCGGCTCAATGACAATGGAGGCC...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CTCTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGCCCAGCACTTTTAAATaGAACCTCCCCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: LFLSGCVMRWGGCTTALWPSTFK*NLPQIS
Trigger: GGAGATCTGGGGGAGGTTTCATTTAAAAGTGCTGGG...CCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAAGTAGCTCATGCAGATaGATGGGTAGGGAGCAATGC +
Preference number: 4 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQSSSCR*MGREQC
Trigger: GCATTGCTCCCTACCCATTCATCTGCATGAGCTACT...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCAGCTTGTCTGGTTCTaGGGCTATCAAATCCATGAC +
Preference number: 4 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQQLVWF*GYQIHD
Trigger: GTCATGGATTTGATAGCCTCAGAACCAGACAAGCTG...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp GGGTGGGCAAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAGGCCGAGGACCCTCTTaGCATTCACTTGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: GWAKGNSIKTQCVGQWQSGRGPS*HSLGTP
Trigger: AGGAGTACCAAGTGAATGGCAAGAGGGTCCTCGGCC...TGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTTGCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGGCCGAGGACCCTCTTaGCATTCACTTGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQEGRGPS*HSLGTP
Trigger: AGGAGTACCAAGTGAATGGCAAGAGGGTCCTCGGCC...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp AGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAGTGATCCTAGCCCTTaGTCCCCAACATCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: RAVLAEPHSTGRRGVVWISDPSP*SPTSVV
Trigger: CACTACAGATGTTGGGGAGCAAGGGCTAGGATCACT...TATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp CCCATGGAGTTTTTCGGCCGAGGACCCTCTTGCCATTCACTTGGTACTCCTTGTCTCTTCCTCAGTGGCTaGGTTATGAGGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PMEFFGRGPSCHSLGTPCLFLSG*VMRWGG
Trigger: TCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG...ACAAGGAGTACCAAGTGAATGGCAAGAGGGTCCTCGGCCGAAAAACTCCATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396417.2
CDS-3UTR GCA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGCTCTTCCTCAGTGGCTaGGTTATGAGGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVLFLSG*VMRWGG
Trigger: TCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp ATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGGTCACTGAGACAAGGTaGCCCTGGCCCAACGAGCCT +
Preference number: 4 (lower is better)
Translates to: MVTSSWDGLTRAEGALDEVTETR*PWPNEP
Trigger: AGGCTCGTTGGGCCAGGGGCACCTTGTCTCAGTGAC...CTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp AAGGAGACACCCTTGTCCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTGCACCAGCTCTGACATaGCTGCGTCCGTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KETPLSHFGAHTADLNESAPALT*LRPSWS
Trigger: AGACCAGGACGGACGCAGCCATGTCAGAGCTGGTGC...AGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp GGGTGGGCAAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCATTGGTCTCCAAAGCCTaGGGTGTCGATGACGGTCAG +
Preference number: 4 (lower is better)
Translates to: GWAKGNSIKTQCVGQWQSLVSKA*GVDDGQ
Trigger: CTGACCGTCATCGACACCCCAGGCTTTGGAGACCAA...TGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTTGCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp CTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCAGGGCAAACTCACAGTaGTTGAGGTTTTCCACTTCG +
Preference number: 4 (lower is better)
Translates to: LSGCVMRWGGCTTALWDSRANSQ*LRFSTS
Trigger: CGAAGTGGAAAACCTCAACCACTGTGAGTTTGCCCT...GCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGATAATGGACAGGCATaGAGGAGCCAAACTTACAAG +
Preference number: 4 (lower is better)
Translates to: PADADDAVGLYWQNPTPLDNGQA*RSQTYK
Trigger: CTTGTAAGTTTGGCTCCTCCATGCCTGTCCATTATC...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGGACGGTGGGTATCATTaGGAATGTCTACAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWDGGYH*ECLQES
Trigger: TGACTCCTGTAGACATTCCCAATGATACCCACCGTC...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGGTGGCTGGCACAGGTaGAAGGACAGTGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALGGWHR*KDSAQE
Trigger: CTCCTGGGCACTGTCCTTCCACCTGTGCCAGCCACC...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAAGCAGCGCTTGAAATaGCCTTCATTCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RAVLAEPHSTGRRGVVWIKQRLK*PSFSSG
Trigger: CCCACTGCTGAATGAAGGCCATTTCAAGCGCTGCTT...TATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGTGGCACTAAAAAGGGCTTaGCCCTGCAGCAATAACAGC +
Preference number: 4 (lower is better)
Translates to: LRYEVGRMYNRTLGQPQVALKRA*PCSNNS
Trigger: GCTGTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGC...CACTTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGATGGTTACAAGTAGCTaGGATGGGCTTACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQMVTSS*DGLTRA
Trigger: TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCAT...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCTTGGTTGTAGATGAATaGCCCACAAGTCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: LSGCVMRWGGCTTALWDSLVVDE*PTSHQP
Trigger: AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAA...GCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp AGGGGCTGTGGTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGATGTTGCTGAATCCATaGCTATACCCTCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RGCGGELDEHSTKKGLALMLLNP*LYPLWS
Trigger: TGACCACAGAGGGTATAGCCATGGATTCAGCAACAT...CAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR TCA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCCGTGTTGACCAGCGTTaGTTTGCCCAGTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGRVDQR*FAQSTL
Trigger: CAGAGTGGACTGGGCAAATCAACGCTGGTCAACACG...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTATGTGTGTCACTTCCTTaGGGTCCTGGAGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLCVSLP*GPGGGS
Trigger: GGACCCACCTCCAGGACCTCAAGGAAGTGACACACA...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp ATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGTGTGTGTCACTTCCTTaGGGTCCTGGAGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: MGLQGQKELLMSSFTLQMCVSLP*GPGGGS
Trigger: GGACCCACCTCCAGGACCTCAAGGAAGTGACACACA...CATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGCCTCCATTGTCATTaGGCCGCTTGGCCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLGLHCH*AAWPCK
Trigger: CTTACAGGGCCAAGCGGCTCAATGACAATGGAGGCC...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp AAGGAGACACCCTTGTCCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTTACATTGGCTGCCTGTaGGCTCAGGGCCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KETPLSHFGAHTADLNESYIGCL*AQGLFR
Trigger: CCTGAACAGGCCCTGAGCTCACAGGCAGCCAATGTA...AGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp GTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCAGCAATAACCTGAGAGGAATGGAGTaGGAAGCAGCGCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: VVSWTSTALKRAWPCSNNLRGME*EAALEM
Trigger: CATTTCAAGCGCTGCTTCTCACTCCATTCCTCTCAG...GTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp GTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCAGCAATAACAGTAGCTCATGCAGATaGATGGGTAGGGAGCAATGC +
Preference number: 4 (lower is better)
Translates to: VVSWTSTALKRAWPCSNNSSSCR*MGREQC
Trigger: GCATTGCTCCCTACCCATTCATCTGCATGAGCTACT...GTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGTCCATTAGCCTACAGTaGCCACCTGTGGTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVSISLQ*PPVVRL
Trigger: TAGCCTGACCACAGGTGGTCACTGTAGGCTAATGGA...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp GTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGACAAGTCACCAGCCTTTaGGCAAGTTGTGTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VLAEPHSTGRRGVVWINGQVTSL*ASCVQV
Trigger: CACCTGGACACAACTTGCTCAAAGGCTGGTGACTTG...TCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAACAAGTCACCAGCCTTTaGGCAAGTTGTGTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQEQVTSL*ASCVQV
Trigger: CACCTGGACACAACTTGCTCAAAGGCTGGTGACTTG...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCTCAAGGAGATGGAGCTaGGCTTCCTGGGTACAAGGC +
Preference number: 4 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGSRRWS*ASWVQG
Trigger: GCCTTGTACCCAGGAAGCTCAGCTCCATCTCCTTGA...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR TCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGGCAACTCTTCCCAGTaGGAAAGTGGGCGATCCAGG +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAGNSSQ*ESGRSR
Trigger: CCTGGATCGCCCACTTTCTCACTGGGAAGAGTTGCC...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp TTTCGGCCGAGGACCCTCTTGCCATTCACTTGGTACTCCTTGTCACTTCCCACCGTCTTCTTGCGCATCTaGTCGATGATGGTGTCGATG +
Preference number: 4 (lower is better)
Translates to: FRPRTLLPFTWYSLSLPTVFLRI*SMMVSM
Trigger: CATCGACACCATCATCGAGCAGATGCGCAAGAAGAC...GGTGGGAAGTGACAAGGAGTACCAAGTGAATGGCAAGAGGGTCCTCGGCCGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396417.2
CDS-3UTR GCA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGCACGAGTGTCAGGGATaGGTTTCTTCCTGGCGATGT +
Preference number: 4 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVHECQG*VSSWRC
Trigger: ACATCGCCAGGAAGAAACGCATCCCTGACACTCGTG...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGAGGCCGAGGACCCTCTTaGCATTCACTTGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: TRAEGALDEFFHPADGLGGRGPS*HSLGTP
Trigger: AGGAGTACCAAGTGAATGGCAAGAGGGTCCTCGGCC...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGGGGCTGTGGTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGTTTTCATTGTTGATTTaGTCTCCAAAGCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RGCGGELDEHSTKKGLALFSLLI*SPKPGV
Trigger: CACCCCAGGCTTTGGAGACCAAATCAACAATGAAAA...CAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAACTCTTGCCATTCACTTaGTACTCCTTGTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQLLPFT*YSLSLP
Trigger: GGGAAGTGACAAGGAGTACCAAGTGAATGGCAAGAG...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGAGAAGAGTTGCCTGTaGCTCACCTGCTCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PLPLEMVTSSWDGLTRAEEKSCL*LTCSQH
Trigger: GTGCTGGGAGCAGGTGAGCCACAGGCAACTCTTCTC...TTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp TGGCAGCAGACATATAAAATACCTTCTCCAGGGAGGCTCAGATCATGGTTCAGGGAACGGTTGAGGGTGTaGAGACCAGCAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: WQQTYKIPSPGRLRSWFRERLRV*RPAAGS
Trigger: GCTGCCAGCTGCTGGTCTCCACACCCTCAACCGTTC...CCTGAACCATGATCTGAGCCTCCCTGGAGAAGGTATTTTATATGTCTGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp GGGTGGGCAAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAAATGGAGGATGCAACTaGCCTAAAGAGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GWAKGNSIKTQCVGQWQSNGGCN*PKEAAG
Trigger: GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATT...TGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTTGCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp CCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGCAGTAGGGCTGTACTaGCAGAACCCCACTCCACTG +
Preference number: 4 (lower is better)
Translates to: PLPLEMVTSSWDGLTRAEAVGLY*QNPTPL
Trigger: CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGC...TTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTGCAGTAGGGCTGTACTaGCAGAACCCCACTCCACTG +
Preference number: 4 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSAVGLY*QNPTPL
Trigger: CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGC...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGTGGCTCATGCAGATGAATaGGTAGGGAGCAATGCCATT +
Preference number: 4 (lower is better)
Translates to: LRYEVGRMYNRTLGQPQVAHADE*VGSNAI
Trigger: AATGGCATTGCTCCCTACCCATTCATCTGCATGAGC...CACTTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTGGCTGCGTTATGAGGTaGGGAGGATGTACAACCGCA +
Preference number: 4 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPGCVMR*GGCTTA
Trigger: TGCGGTTGTACATCCTCCCCACCTCATAACGCAGCC...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGAGCGTGTACATATTGTaGGTTTCTGGGGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWSVYIL*VSGGLC
Trigger: ACACAAACCCCCAGAAACCCACAATATGTACACGCT...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGGCATCCTGTTGGATTTaGTCAGACCTGGGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: CTGRTPLHWEERSGLDKWASCWI*SDLGSL
Trigger: CAGGGAACCCAGGTCTGACCAAATCCAACAGGATGC...CCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGATGGCTATACCCTCTGTaGTCATATCTGGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGWLYPL*SYLVWL
Trigger: CAGCCAAACCAGATATGACCACAGAGGGTATAGCCA...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp GATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGTGTGGTCTTCCCAGTaGCTGGGTCTGGGGTTACTG +
Preference number: 4 (lower is better)
Translates to: DGLTRAEGALDEFFHPADVWSSQ*LGLGLL
Trigger: CAGTAACCCCAGACCCAGCCACTGGGAAGACCACAC...ATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
3UTR CAA 72 bp TGCCATCTGTCCTTGGAGAATCTCTATAGCCCCAGTTaGTGTGCAGGTTCCGAGAGAAGAGTTGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CHLSLENLYSPS*CAGSERRVACG
Trigger: GCCACAGGCAACTCTTCTCTCGGAACCTGCACACAAACTGGGGCTATAGAGATTCTCCAAGGACAGATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp ATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGCCAGCAGGTTGGAGTTaGTGCTCATGGGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: MGLQGQKELLMSSFTLQMPAGWS*CSWASW
Trigger: CCATGAAGCCCATGAGCATCAACTCCAACCTGCTGG...CATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTATGCGCATCTGCTCGATaGTGGTGTCGATGCCGATGT +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLCASAR*WCRCRC
Trigger: ACATCGGCATCGACACCATCATCGAGCAGATGCGCA...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp ATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGCGTGTTGACCAGCGTTaGTTTGCCCAGTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: MGLQGQKELLMSSFTLQMRVDQR*FAQSTL
Trigger: CAGAGTGGACTGGGCAAATCAACGCTGGTCAACACG...CATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAATCTCGTACTGCTCATTaGTGTACTTCTCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQSRTAH*CTSQWA
Trigger: AGCCCATTGAGAAGTACATCAATGAGCAGTACGAGA...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCTCTTCCTGGCGATGTTaGCCTCCTCCTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGSSWRC*PPPSGT
Trigger: AGTTCCTGAAGGAGGAGGTCAACATCGCCAGGAAGA...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp TCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGGGGCCTCCATTGTCATTaGGCCGCTTGGCCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: SSNVFLGKPLFLSGCVMRGLHCH*AAWPCK
Trigger: CTTACAGGGCCAAGCGGCTCAATGACAATGGAGGCC...CCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTCCTGTGGGACAGAGTTaGGAGGAAGAAGGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSPVGQS*EEEGGW
Trigger: CCAACCACCTTCTTCCTCTCAACTCTGTCCCACAGG...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGATCATCTAAAAGGAAGTaGGAGATGTCAGAGACACGC +
Preference number: 4 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGSSKRK*EMSETR
Trigger: GCGTGTCTCTGACATCTCTCACTTCCTTTTAGATGA...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGGAGGTCAAGTATGTATaGAGCAAATGGAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQEVKYV*SKWSNR
Trigger: TCTGTTGCTCCATTTGCTTCATACATACTTGACCTC...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGATCCCTCTTATTGCTaGGTGGACAGAAGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQEDPSYC*VDRRVL
Trigger: TAGCACCCTTCTGTCCACTCAGCAATAAGAGGGATC...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGTCTTCTTGCGCATCTaGTCGATGATGGTGTCGATG +
Preference number: 4 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVVFLRI*SMMVSM
Trigger: CATCGACACCATCATCGAGCAGATGCGCAAGAAGAC...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp CTCTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGTCCTTGCGAACCCTTTaGTTGAATTCAGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LFLSGCVMRWGGCTTALWSLRTL*LNSDFS
Trigger: GGAGAAGTCTGAATTCAAGCAAAGGGTTCGCAAGGA...CCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGAAAAGGCATGCTCTCCTaGCTGATTTTGTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGKGMLS*LILSFS
Trigger: GGAGAATGACAAAATCAGGCAGGAGAGCATGCCTTT...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp GAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGGCCGAGGACCCTCTTaGCATTCACTTGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: EMVTSSWDGLTRAEGALDGRGPS*HSLGTP
Trigger: AGGAGTACCAAGTGAATGGCAAGAGGGTCCTCGGCC...ATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp TGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGTGATCCTAGCCCTTaGTCCCCAACATCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: CTGRTPLHWEERSGLDKWSDPSP*SPTSVV
Trigger: CACTACAGATGTTGGGGAGCAAGGGCTAGGATCACT...CCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGGGGCAGGGAACTCTGTaGCTGTGTCCAGTTGGGATG +
Preference number: 4 (lower is better)
Translates to: HADEWVGSNAIALRDGYKGQGTL*LCPVGM
Trigger: CATCCCAACTGGACACAGGCACAGAGTTCCCTGCCC...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp GTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGACGAAACCGGTCTTCATaGTCTTCTTGCGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: VLAEPHSTGRRGVVWINGRNRSS*SSCASA
Trigger: AGCAGATGCGCAAGAAGACCATGAAGACCGGTTTCG...TCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTATTGGTCTCCAAAGCCTaGGGTGTCGATGACGGTCAG +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLLVSKA*GVDDGQ
Trigger: CTGACCGTCATCGACACCCCAGGCTTTGGAGACCAA...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GATGGGCTAGGACCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACTTTTCATTGTTGATTTaGTCTCCAAAGCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: DGLGPADADDAVGLYWQNFSLLI*SPKPGV
Trigger: CACCCCAGGCTTTGGAGACCAAATCAACAATGAAAA...GTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGGTCCTAGCCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGTTTTCATTGTTGATTTaGTCTCCAAAGCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQFSLLI*SPKPGV
Trigger: CACCCCAGGCTTTGGAGACCAAATCAACAATGAAAA...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAAGCAGCGCTTGAAATaGCCTTCATTCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: CTGRTPLHWEERSGLDKWKQRLK*PSFSSG
Trigger: CCCACTGCTGAATGAAGGCCATTTCAAGCGCTGCTT...CCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GGGTGGGCAAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAGCACTAAAAAGGGCTTaGCCCTGCAGCAATAACAGC +
Preference number: 4 (lower is better)
Translates to: GWAKGNSIKTQCVGQWQSALKRA*PCSNNS
Trigger: GCTGTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGC...TGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTTGCCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTAATGGAGGATGCAACTaGCCTAAAGAGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPNGGCN*PKEAAG
Trigger: GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATT...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp CTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGTGAGGAGAGGAGTGGTTTaGATAAATGGAGGATGCAAC +
Preference number: 4 (lower is better)
Translates to: LRYEVGRMYNRTLGQPQVRRGVV*INGGCN
Trigger: GTTGCATCCTCCATTTATCCAAACCACTCCTCTCCT...CACTTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAAGGAGAGGAGTGGTTTaGATAAATGGAGGATGCAAC +
Preference number: 4 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQRRGVV*INGGCN
Trigger: GTTGCATCCTCCATTTATCCAAACCACTCCTCTCCT...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGGGCAAACTCACAGTGGTTGAGGTTTTCCACTTCGATGATCCCCCATGGAGTTAGAACCCCACTCCACTaGGAGGAGAGGAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: RANSQWLRFSTSMIPHGVRTPLH*EERSGL
Trigger: CAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT...AACTCCATGGGGGATCATCGAAGTGGAAAACCTCAACCACTGTGAGTTTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396417.2
CDS-3UTR CCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAAGAACCCCACTCCACTaGGAGGAGAGGAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLRTPLH*EERSGL
Trigger: CAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTGCAGTAGGGCTGTACTaGCAGAACCCCACTCCACTG +
Preference number: 4 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRAVGLY*QNPTPL
Trigger: CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGC...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGGCTGCGTTATGAGGTaGGGAGGATGTACAACCGCA +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAGCVMR*GGCTTA
Trigger: TGCGGTTGTACATCCTCCCCACCTCATAACGCAGCC...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGAAGCGTGTACATATTGTaGGTTTCTGGGGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGSVYIL*VSGGLC
Trigger: ACACAAACCCCCAGAAACCCACAATATGTACACGCT...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATTGCTGAGTGGACAGAAGCAGTGTGTGGGGCAGTaGCAGTCAACATTCGCAAAC +
Preference number: 4 (lower is better)
Translates to: GVGRVGGKRSLLLLSGQKQCVGQ*QSTFAN
Trigger: GTTTGCGAATGTTGACTGCCACTGCCCCACACACTG...CTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGATGCGACTGCATCTCTaGAGGAGCAGGAGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVMRLHL*RSRSKV
Trigger: AACTTTGCTCCTGCTCCTCCAGAGATGCAGTCGCAT...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp TCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGGCCGGCTGGAGGTCTGTaGGATATGGCTTTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: SSNVFLGKPLFLSGCVMRPAGGL*DMALGE
Trigger: TTCCCCCAAAGCCATATCCCACAGACCTCCAGCCGG...CCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTTCCCAGTGAGAAAGTaGGCGATCCAGGGACCGTGC +
Preference number: 4 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRFPVRK*AIQGPC
Trigger: GCACGGTCCCTGGATCGCCCACTTTCTCACTGGGAA...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCAGCAGCCTTCTTTCCTaGGGTAGGCAACTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGSSLLS*GRQLFP
Trigger: TGGGAAGAGTTGCCTACCCCAGGAAAGAAGGCTGCT...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp GGGTGGGCAAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCATGGCAAGCATCCTGTTaGATTTGGTCAGACCTGGGT +
Preference number: 4 (lower is better)
Translates to: GWAKGNSIKTQCVGQWQSWQASC*IWSDLG
Trigger: ACCCAGGTCTGACCAAATCCAACAGGATGCTTGCCA...TGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTTGCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCACCAGGGGCTTCTCCGTaGCAAGCATCCTGTTGGATT +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAPGASP*QASCWI
Trigger: AATCCAACAGGATGCTTGCCACGGAGAAGCCCCTGG...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCAGGACTGGTGCACTCTaGGCTAACCGGGATTGGAAA +
Preference number: 4 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGRTGAL*ANRDWK
Trigger: TTTCCAATCCCGGTTAGCCCAGAGTGCACCAGTCCT...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTAATTCACAGTCGTGTTaGCCCTTTGGAGACGCCCCC +
Preference number: 4 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSNSQSC*PFGDAP
Trigger: GGGGGCGTCTCCAAAGGGCCAACACGACTGTGAATT...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp AGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATACTCTGTGGTCATATCTaGTTTGGCTGTGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RAVLAEPHSTGRRGVVWILCGHI*FGCASC
Trigger: ACAAGAAGCACAGCCAAACCAGATATGACCACAGAG...TATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp GTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTGTGAGGCAGGCTCTGTaGCTCTGTCCATGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VNSSNVFLGKPLFLSGCVVRQAL*LCPWQH
Trigger: ATGCTGCCATGGACAGAGCCACAGAGCCTGCCTCAC...AACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR TCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGAGCCCTTTGGACATaGATCCTCCTTTGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLGALWT*ILLCLR
Trigger: ACGGAGACAAAGGAGGATTCATGTCCAAAGGGCTCC...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396425.7
ENST00000396426.7
CDS-3UTR TCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTGGAGCCCTTTGGACATaGATCCTCCTTTGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSGALWT*ILLCLR
Trigger: ACGGAGACAAAGGAGGATTCATGTCCAAAGGGCTCC...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396425.7
ENST00000396426.7
CDS-3UTR TCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTCCAGCAGGTTGGAGTTaGTGCTCATGGGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALPAGWS*CSWASW
Trigger: CCATGAAGCCCATGAGCATCAACTCCAACCTGCTGG...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTTGCGCATCTGCTCGATaGTGGTGTCGATGCCGATGT +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALCASAR*WCRCRC
Trigger: ACATCGGCATCGACACCATCATCGAGCAGATGCGCA...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTCGTGTTGACCAGCGTTaGTTTGCCCAGTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALRVDQR*FAQSTL
Trigger: CAGAGTGGACTGGGCAAATCAACGCTGGTCAACACG...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTGCATGCTCTCCTGCCTaGTTTTGTCATTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPACSPA*FCHSPS
Trigger: AGACGGAGAATGACAAAATCAGGCAGGAGAGCATGC...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp GTTTTCCCTTCCCTAAGGCTAAACTGTTTCCCTGGCCCCGAATTTCATGAATCTGGCCTCCATTGTCATTaGGCCGCTTGGCCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: VFPSLRLNCFPGPEFHESGLHCH*AAWPCK
Trigger: CTTACAGGGCCAAGCGGCTCAATGACAATGGAGGCC...AGATTCATGAAATTCGGGGCCAGGGAAACAGTTTAGCCTTAGGGAAGGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAAGTGAGAAGCAGCGCTTaGAATGGCCTTCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQVRSSA*NGLHSA
Trigger: TGCTGAATGAAGGCCATTTCAAGCGCTGCTTCTCAC...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTCTGAGAGGAATGGAGTaGGAAGCAGCGCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPLRGME*EAALEM
Trigger: CATTTCAAGCGCTGCTTCTCACTCCATTCCTCTCAG...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCATCAGTGGCTGCGTTATaGGGTGGGGAGGATGTACAA +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRASVAAL*GGEDVQ
Trigger: TTGTACATCCTCCCCACCTCATAACGCAGCCACTGA...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTATCAGTGGCTGCGTTATaGGGTGGGGAGGATGTACAA +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLSVAAL*GGEDVQ
Trigger: TTGTACATCCTCCCCACCTCATAACGCAGCCACTGA...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGAGGACTTGGTTGTAGATaGATGGCCCACAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: TRAEGALDEFFHPADGLGGLGCR*MAHKSP
Trigger: TGGTGACTTGTGGGCCATTCATCTACAACCAAGTCC...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp CCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGTTCACGGTTTTGCCTaGCTTGACTGTCCCTACCGA +
Preference number: 4 (lower is better)
Translates to: PLPLEMVTSSWDGLTRAEVHGFA*LDCPYR
Trigger: TCGGTAGGGACAGTCAAGTCAGGCAAAACCGTGAAC...TTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGAGGAACTTCTCGTACTaGTCATTGATGTACTTCTCA +
Preference number: 4 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQRNFSY*SLMYFS
Trigger: TGAGAAGTACATCAATGAGCAGTACGAGAAGTTCCT...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp GTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCAGCAATAACTCCTTGCGAACCCTTTaGTTGAATTCAGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: VVSWTSTALKRAWPCSNNSLRTL*LNSDFS
Trigger: GGAGAAGTCTGAATTCAAGCAAAGGGTTCGCAAGGA...GTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTAGTGATCCTAGCCCTTaGTCCCCAACATCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPSDPSP*SPTSVV
Trigger: CACTACAGATGTTGGGGAGCAAGGGCTAGGATCACT...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGCTCTTCCTCAGTGGCTaGGTTATGAGGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GQKGASFSLACTYCGFLGLFLSG*VMRWGG
Trigger: TCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTCTGAACCCACAGCTGTaGCCATCCTGCTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALLNPQL*PSCLCP
Trigger: TGGACACAAGCAGGATGGGCACAGCTGTGGGTTCAG...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGGTCCGTCCTGGTCTCTaGGAGCCCTTTGGACATGAA +
Preference number: 4 (lower is better)
Translates to: HADEWVGSNAIALRDGYKVRPGL*EPFGHE
Trigger: TTCATGTCCAAAGGGCTCCCAGAGACCAGGACGGAC...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
CDS-3UTR CCA 90 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATTGCTGAGTGGACAGAAGCGAAACCGGTCTTCATaGTCTTCTTGCGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GVGRVGGKRSLLLLSGQKRNRSS*SSCASA
Trigger: AGCAGATGCGCAAGAAGACCATGAAGACCGGTTTCG...CTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTTTGGTCTCCAAAGCCTaGGGTGTCGATGACGGTCAG +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALLVSKA*GVDDGQ
Trigger: CTGACCGTCATCGACACCCCAGGCTTTGGAGACCAA...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGATTTTCATTGTTGATTTaGTCTCCAAAGCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGFSLLI*SPKPGV
Trigger: CACCCCAGGCTTTGGAGACCAAATCAACAATGAAAA...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATTTCGATGATCCCCCATaGAGTTTTTCGGCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: EMVTSSWDGLTRAEGALDFDDPP*SFSAED
Trigger: GTCCTCGGCCGAAAAACTCCATGGGGGATCATCGAA...ATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AAGGAGACACCCTTGTCCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTTTCGATGATCCCCCATaGAGTTTTTCGGCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: KETPLSHFGAHTADLNESFDDPP*SFSAED
Trigger: GTCCTCGGCCGAAAAACTCCATGGGGGATCATCGAA...AGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGAGGGCAAACTCACAGTaGTTGAGGTTTTCCACTTCG +
Preference number: 4 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVRANSQ*LRFSTS
Trigger: CGAAGTGGAAAACCTCAACCACTGTGAGTTTGCCCT...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCTTGAGGTCCTGGAGGTaGGTCCTGATGACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGLRSWR*VLMTKS
Trigger: AGACTTTGTCATCAGGACCCACCTCCAGGACCTCAA...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATTGCTGAGTGGACAGAAGTTGAGGTCCTGGAGGTaGGTCCTGATGACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: GVGRVGGKRSLLLLSGQKLRSWR*VLMTKS
Trigger: AGACTTTGTCATCAGGACCCACCTCCAGGACCTCAA...CTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp GGGTGGGCAAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAGAGGAAGAAGGTGGTTaGTGGTGGTATTTGGGATGT +
Preference number: 4 (lower is better)
Translates to: GWAKGNSIKTQCVGQWQSEEEGG*WWYLGC
Trigger: ACATCCCAAATACCACCACCAACCACCTTCTTCCTC...TGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTTGCCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAAGCACTAAAAAGGGCTTaGCCCTGCAGCAATAACAGC +
Preference number: 4 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQALKRA*PCSNNS
Trigger: GCTGTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGC...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGCTGTGGTGGTGAGCTaGACGAGCACAGCACTAAAA +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAAVVVS*TSTALK
Trigger: TTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGC...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp ATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGCTGTGGTGGTGAGCTaGACGAGCACAGCACTAAAA +
Preference number: 4 (lower is better)
Translates to: MGLQGQKELLMSSFTLQMAVVVS*TSTALK
Trigger: TTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGC...CATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AAGGAGACACCCTTGTCCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTAATGGAGGATGCAACTaGCCTAAAGAGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KETPLSHFGAHTADLNESNGGCN*PKEAAG
Trigger: GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATT...AGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATAATGGAGGATGCAACTaGCCTAAAGAGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: DGLTRAEGALDEFFHPADNGGCN*PKEAAG
Trigger: GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATT...ATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTAGAACCCCACTCCACTaGGAGGAGAGGAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALRTPLH*EERSGL
Trigger: CAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGAGAACCCCACTCCACTaGGAGGAGAGGAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: GQKGASFSLACTYCGFLGRTPLH*EERSGL
Trigger: CAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGGGCTGCGTTATGAGGTaGGGAGGATGTACAACCGCA +
Preference number: 4 (lower is better)
Translates to: GQKGASFSLACTYCGFLGGCVMR*GGCTTA
Trigger: TGCGGTTGTACATCCTCCCCACCTCATAACGCAGCC...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGGCTTTGCCCTCCCTTaGGTATTTTCCATTAGCCTA +
Preference number: 4 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVGFALP*VFSISL
Trigger: TAGGCTAATGGAAAATACCCAAGGGAGGGCAAAGCC...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp ATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGCAGTGTGTGGGGCAGTaGCAGTCAACATTCGCAAAC +
Preference number: 4 (lower is better)
Translates to: MGLQGQKELLMSSFTLQMQCVGQ*QSTFAN
Trigger: GTTTGCGAATGTTGACTGCCACTGCCCCACACACTG...CATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp ATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGCAGTGTGTGGGGCAGTaGCAGTCAACATTCGCAAAC +
Preference number: 4 (lower is better)
Translates to: MVTSSWDGLTRAEGALDEQCVGQ*QSTFAN
Trigger: GTTTGCGAATGTTGACTGCCACTGCCCCACACACTG...CTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGTTGGTTGTAGATGAATaGCCCACAAGTCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVLVVDE*PTSHQP
Trigger: AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAA...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAGGTCTGTGGGATATaGCTTTGGGGGAAGGTATCC +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAEVCGI*LWGKVS
Trigger: GGATACCTTCCCCCAAAGCCATATCCCACAGACCTC...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp GTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGATTGTGGCTAAATGTCTaGCTGCGTCTGTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: VLAEPHSTGRRGVVWINGLWLNV*LRLSLC
Trigger: ACACAAGGACAGACGCAGCCAGACATTTAGCCACAA...TCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTTGGCTCTGTTCACTCTaGCCAAAGCCATGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPWLCSL*PKPWLF
Trigger: AAACAGCCATGGCTTTGGCCAGAGTGAACAGAGCCA...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGTCCGTCCTGGTCTCTaGGAGCCCTTTGTATTCTGT +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAVRPGL*EPFVFC
Trigger: ACAGAATACAAAGGGCTCCCAGAGACCAGGACGGAC...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
3UTR CAA 72 bp TTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTTaGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LVVDEWPTSHQP*SKLCPGGDRKR
Trigger: CCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCATTCATCTACAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAATGCGAACCCTTTGCTTaGATTCAGACTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQCEPFA*IQTSPP
Trigger: TGGAGGAGAAGTCTGAATTCAAGCAAAGGGTTCGCA...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGCATGCTCTCCTGCCTaGTTTTGTCATTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: PLPLEMVTSSWDGLTRAEACSPA*FCHSPS
Trigger: AGACGGAGAATGACAAAATCAGGCAGGAGAGCATGC...TTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGTGTCCTGTAGTTTTGTaGTTTTATGTGAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQCPVVL*FYVKGS
Trigger: ACTGCCTTTCACATAAAATCACAAAACTACAGGACA...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGGAAGGGAGAGAAGTCTaGCGGAGAAAACGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: GQKGASFSLACTYCGFLGEGREV*RRKRRC
Trigger: ACACCTCCGTTTTCTCCGTCAGACTTCTCTCCCTTC...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTGGACAGAAGGTTGTATaGGGTTATTGTAAACAGTTT +
Preference number: 4 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVGQKVV*GYCKQF
Trigger: AAACTGTTTACAATAACCTCATACAACCTTCTGTCC...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp CCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTAGTAAGCAGAAAAATTGGGGTTGAGAACGGTTaGGGGTGTGGAGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: PTLGLTQLISMNLVSRKIGVENG*GCGDQQ
Trigger: CTGCTGGTCTCCACACCCTCAACCGTTCTCAACCCC...AATTTTTCTGCTTACTAGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp GATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGTGAGAAGCAGCGCTTaGAATGGCCTTCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: DGLTRAEGALDEFFHPADVRSSA*NGLHSA
Trigger: TGCTGAATGAAGGCCATTTCAAGCGCTGCTTCTCAC...ATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGTGAGAAGCAGCGCTTaGAATGGCCTTCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAVRSSA*NGLHSA
Trigger: TGCTGAATGAAGGCCATTTCAAGCGCTGCTTCTCAC...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp ATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGCTGAGAGGAATGGAGTaGGAAGCAGCGCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: MVTSSWDGLTRAEGALDELRGME*EAALEM
Trigger: CATTTCAAGCGCTGCTTCTCACTCCATTCCTCTCAG...CTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAACTGAGAGGAATGGAGTaGGAAGCAGCGCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: PLPLEMVTSSWDGLTRAELRGME*EAALEM
Trigger: CATTTCAAGCGCTGCTTCTCACTCCATTCCTCTCAG...TTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp GCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGAGTGACCCACCCTCATaGATATCTTTAAGTAATGAA +
Preference number: 4 (lower is better)
Translates to: ADDAVGLYWQNPTPLGGESDPPS*ISLSNE
Trigger: TTCATTACTTAAAGATATTCATGAGGGTGGGTCACT...CTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTCAGTGGCTGCGTTATaGGGTGGGGAGGATGTACAA +
Preference number: 4 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRSVAAL*GGEDVQ
Trigger: TTGTACATCCTCCCCACCTCATAACGCAGCCACTGA...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGATCCCTCTTATTGCTaGGTGGACAGAAGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLDPSYC*VDRRVL
Trigger: TAGCACCCTTCTGTCCACTCAGCAATAAGAGGGATC...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGAAGGAACTTCTCGTACTaGTCATTGATGTACTTCTCA +
Preference number: 4 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGRNFSY*SLMYFS
Trigger: TGAGAAGTACATCAATGAGCAGTACGAGAAGTTCCT...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp TGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAAAGGCATGCTCTCCTaGCTGATTTTGTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: CTGRTPLHWEERSGLDKWKGMLS*LILSFS
Trigger: GGAGAATGACAAAATCAGGCAGGAGAGCATGCCTTT...CCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTCGGCTTGATTGTGCCTaGTGTAGCCAAGTTCACGGT +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALRLDCA*CSQVHG
Trigger: ACCGTGAACTTGGCTACAGCAGGCACAATCAAGCCG...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp CCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTAGTAAGCAGAAAAATTGCACCAGCTCTGACATaGCTGCGTCCGTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PTLGLTQLISMNLVSRKIAPALT*LRPSWS
Trigger: AGACCAGGACGGACGCAGCCATGTCAGAGCTGGTGC...AATTTTTCTGCTTACTAGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTTCGATGATCCCCCATaGAGTTTTTCGGCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRFDDPP*SFSAED
Trigger: GTCCTCGGCCGAAAAACTCCATGGGGGATCATCGAA...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGTTCGATGATCCCCCATaGAGTTTTTCGGCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: GQKGASFSLACTYCGFLGFDDPP*SFSAED
Trigger: GTCCTCGGCCGAAAAACTCCATGGGGGATCATCGAA...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTAGGGCAAACTCACAGTaGTTGAGGTTTTCCACTTCG +
Preference number: 4 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPRANSQ*LRFSTS
Trigger: CGAAGTGGAAAACCTCAACCACTGTGAGTTTGCCCT...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTTGAGGTCCTGGAGGTaGGTCCTGATGACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSLRSWR*VLMTKS
Trigger: AGACTTTGTCATCAGGACCCACCTCCAGGACCTCAA...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp ACTGGACACTGGGAACTGCATAACTCACTGTGTTTCCCTCTTTACATTGGCTGCCATGGGTTACTGTCGTaGCTTTCCTCTGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: TGHWELHNSLCFPLYIGCHGLLS*LSSVST
Trigger: CGTGGACACAGAGGAAAGCCACGACAGTAACCCATG...GCAGCCAATGTAAAGAGGGAAACACAGTGAGTTATGCAGTTCCCAGTGTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp GGTAGCTTTGTGACACTGAACACGACACAGACTGAAGGGTGGAGCTCCATTTGTGAGAAGTGGTCGTCATaGGTTACTGTCGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: GSFVTLNTTQTEGWSSICEKWSS*VTVVAF
Trigger: GAAAGCCACGACAGTAACCCATGACGACCACTTCTC...ACAAATGGAGCTCCACCCTTCAGTCTGTGTCGTGTTCAGTGTCACAAAGCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGTGGTCCATTGAATCTTaGGTCTTGAGTCTATGTTTT +
Preference number: 4 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWWSIES*VLSLCF
Trigger: AAAACATAGACTCAAGACCCAAGATTCAATGGACCA...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp CAGACATATAAAATACCTTCTCCAGGGAGGCTCAGATCATGGTTCAGGGGTGCCGAAATGTATAACCTCTaGGCTGTAGCGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QTYKIPSPGRLRSWFRGAEMYNL*AVALLL
Trigger: CAGCAGCAGCGCTACAGCCCAGAGGTTATACATTTC...GGCACCCCTGAACCATGATCTGAGCCTCCCTGGAGAAGGTATTTTATATGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp GAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATAAGCAGCGCTTGAAATaGCCTTCATTCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: EMVTSSWDGLTRAEGALDKQRLK*PSFSSG
Trigger: CCCACTGCTGAATGAAGGCCATTTCAAGCGCTGCTT...ATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGGGCTGTGGTGGTGAGCTaGACGAGCACAGCACTAAAA +
Preference number: 4 (lower is better)
Translates to: SSNVFLGKPLFLSGCVMRAVVVS*TSTALK
Trigger: TTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGC...CCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTGCTGTGGTGGTGAGCTaGACGAGCACAGCACTAAAA +
Preference number: 4 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRAVVVS*TSTALK
Trigger: TTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGC...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATTGCTGAGTGGACAGAAGATGGTTACAAGTAGCTaGGATGGGCTTACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GVGRVGGKRSLLLLSGQKMVTSS*DGLTRA
Trigger: TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCAT...CTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAAGCTCATGCAGATGAATaGGTAGGGAGCAATGCCATT +
Preference number: 4 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQAHADE*VGSNAI
Trigger: AATGGCATTGCTCCCTACCCATTCATCTGCATGAGC...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGAGCTCATGCAGATGAATaGGTAGGGAGCAATGCCATT +
Preference number: 4 (lower is better)
Translates to: TRAEGALDEFFHPADGLGAHADE*VGSNAI
Trigger: AATGGCATTGCTCCCTACCCATTCATCTGCATGAGC...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAATTGGTTGTAGATGAATaGCCCACAAGTCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQLVVDE*PTSHQP
Trigger: AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAA...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGCAGGAGCAAAGTTGTaGTCCATCCAGGTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLAGAKL*SIQVVC
Trigger: ACAAACGACCTGGATGGACCACAACTTTGCTCCTGC...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGGGCTTGCCTTTTCCTaGAGAAGCTCTGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALGLAFS*RSSGRH
Trigger: ATGCCTACCAGAGCTTCTCCAGGAAAAGGCAAGCCC...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp AAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAACATTCGCCTCTGGCCAAAGCCATaGCTGTTTCCAACCTACTGG +
Preference number: 4 (lower is better)
Translates to: KGEFYKDTVCGAVAVNIRLWPKP*LFPTYW
Trigger: CCAGTAGGTTGGAAACAGCCATGGCTTTGGCCAGAG...GCGAATGTTGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR TCA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGATCTCGTACTGCTCATTaGTGTACTTCTCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: TRAEGALDEFFHPADGLGSRTAH*CTSQWA
Trigger: AGCCCATTGAGAAGTACATCAATGAGCAGTACGAGA...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGGTGAGAAGCAGCGCTTaGAATGGCCTTCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQKGASFSLACTYCGFLGVRSSA*NGLHSA
Trigger: TGCTGAATGAAGGCCATTTCAAGCGCTGCTTCTCAC...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCATGCAGCAATAACAGCTaGGAGGAATGGAGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRACSNNS*EEWSEK
Trigger: CTTCTCACTCCATTCCTCTCAGCTGTTATTGCTGCA...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp GGTAGCTTTGTGACACTGAACACGACACAGACTGAAGGGTGGAGCTCCATTTGTTGCAGCAATAACAGCTaGGAGGAATGGAGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSFVTLNTTQTEGWSSICCSNNS*EEWSEK
Trigger: CTTCTCACTCCATTCCTCTCAGCTGTTATTGCTGCA...ACAAATGGAGCTCCACCCTTCAGTCTGTGTCGTGTTCAGTGTCACAAAGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp GAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATTGCAGCAATAACAGCTaGGAGGAATGGAGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: EMVTSSWDGLTRAEGALDCSNNS*EEWSEK
Trigger: CTTCTCACTCCATTCCTCTCAGCTGTTATTGCTGCA...ATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp GATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATTGCAGCAATAACAGCTaGGAGGAATGGAGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: DGLTRAEGALDEFFHPADCSNNS*EEWSEK
Trigger: CTTCTCACTCCATTCCTCTCAGCTGTTATTGCTGCA...ATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp GTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGGAGGGGCTGTGGTGGTaGGCTGGACGAGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: VCVFSFCLFVWTEESQLQEGLWW*AGRAQH
Trigger: GTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCTC...CTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTAGTAGCTCATGCAGATaGATGGGTAGGGAGCAATGC +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALSSSCR*MGREQC
Trigger: GCATTGCTCCCTACCCATTCATCTGCATGAGCTACT...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp TCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGGGATCCCTCTTATTGCTaGGTGGACAGAAGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: SSNVFLGKPLFLSGCVMRDPSYC*VDRRVL
Trigger: TAGCACCCTTCTGTCCACTCAGCAATAAGAGGGATC...CCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGGGACTTGGTTGTAGATaGATGGCCCACAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: GQKGASFSLACTYCGFLGGLGCR*MAHKSP
Trigger: TGGTGACTTGTGGGCCATTCATCTACAACCAAGTCC...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGGGACTTGGTTGTAGATaGATGGCCCACAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: HADEWVGSNAIALRDGYKGLGCR*MAHKSP
Trigger: TGGTGACTTGTGGGCCATTCATCTACAACCAAGTCC...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGGACTTGGTTGTAGATaGATGGCCCACAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALGLGCR*MAHKSP
Trigger: TGGTGACTTGTGGGCCATTCATCTACAACCAAGTCC...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGAGGCTATCAAATCCATaGCCATCCCTGGCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: HADEWVGSNAIALRDGYKRLSNP*PSLAWL
Trigger: CAACCAAGCCAGGGATGGTCATGGATTTGATAGCCT...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp AACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGCACGAGTGTCAGGGATaGGTTTCTTCCTGGCGATGT +
Preference number: 4 (lower is better)
Translates to: NSSNVFLGKPLFLSGCVMHECQG*VSSWRC
Trigger: ACATCGCCAGGAAGAAACGCATCCCTGACACTCGTG...CATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAATCCTTGCGAACCCTTTaGTTGAATTCAGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQSLRTL*LNSDFS
Trigger: GGAGAAGTCTGAATTCAAGCAAAGGGTTCGCAAGGA...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTGTCTCCATACAGGACTaGTTCTACAGTAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSVSIQD*FYSSQG
Trigger: TCCTTGGCTACTGTAGAAGCAGTCCTGTATGGAGAC...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR GCA 90 bp GATGGGCTAGGACCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACAGTAAGCAGAAAAATTaGTTTCTTGACCCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: DGLGPADADDAVGLYWQNSKQKN*FLDPLR
Trigger: CCTTAAAGGGTCAAGAAAGCAATTTTTCTGCTTACT...GTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGGTCCTAGCCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTCGAAACCGGTCTTCATaGTCTTCTTGCGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: VNSSNVFLGKPLFLSGCVRNRSS*SSCASA
Trigger: AGCAGATGCGCAAGAAGACCATGAAGACCGGTTTCG...AACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp AAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAACATTCGCCGAAACCGGTCTTCATaGTCTTCTTGCGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: KGEFYKDTVCGAVAVNIRRNRSS*SSCASA
Trigger: AGCAGATGCGCAAGAAGACCATGAAGACCGGTTTCG...GCGAATGTTGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTACTCTTGCCATTCACTTaGTACTCCTTGTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLLLPFT*YSLSLP
Trigger: GGGAAGTGACAAGGAGTACCAAGTGAATGGCAAGAG...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATCTCTTGCCATTCACTTaGTACTCCTTGTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: DGLTRAEGALDEFFHPADLLPFT*YSLSLP
Trigger: GGGAAGTGACAAGGAGTACCAAGTGAATGGCAAGAG...ATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAACAGTGGGGCAGGGGGTaGCTGGCACAGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKQWGRG*LAQVEG
Trigger: TCCTTCCACCTGTGCCAGCCACCCCCTGCCCCACTG...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAACATTCGCGCACTAAAAAGGGCTTaGCCCTGCAGCAATAACAGC +
Preference number: 4 (lower is better)
Translates to: KGEFYKDTVCGAVAVNIRALKRA*PCSNNS
Trigger: GCTGTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGC...GCGAATGTTGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGAAGGAGAGGAGTGGTTTaGATAAATGGAGGATGCAAC +
Preference number: 4 (lower is better)
Translates to: TRAEGALDEFFHPADGLGRRGVV*INGGCN
Trigger: GTTGCATCCTCCATTTATCCAAACCACTCCTCTCCT...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCAGCGTGTACATATTGTaGGTTTCTGGGGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGSVYIL*VSGGLC
Trigger: ACACAAACCCCCAGAAACCCACAATATGTACACGCT...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGCTTTGCCCTCCCTTaGGTATTTTCCATTAGCCTA +
Preference number: 4 (lower is better)
Translates to: DGLTRAEGALDEFFHPADGFALP*VFSISL
Trigger: TAGGCTAATGGAAAATACCCAAGGGAGGGCAAAGCC...ATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTGGCTTTGCCCTCCCTTaGGTATTTTCCATTAGCCTA +
Preference number: 4 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSGFALP*VFSISL
Trigger: TAGGCTAATGGAAAATACCCAAGGGAGGGCAAAGCC...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGGCTTTGCCCTCCCTTaGGTATTTTCCATTAGCCTA +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAGFALP*VFSISL
Trigger: TAGGCTAATGGAAAATACCCAAGGGAGGGCAAAGCC...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CCA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGTTGCCCAGTCCACTCTaGCCTTTGGACATGAATCCT +
Preference number: 4 (lower is better)
Translates to: HADEWVGSNAIALRDGYKLPSPL*PLDMNP
Trigger: AGGATTCATGTCCAAAGGCCAGAGTGGACTGGGCAA...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406029.5
3UTR CAA 72 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATaGCTGAGTGGACAGAAGGGTGCTAGTTTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: GVGRVGGKRSLL*LSGQKGASFSL
Trigger: TAAGGAAAAACTAGCACCCTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGAAGCAGTTTTCATTGTTaGTTTGGTCTCCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: TRAEGALDEFFHPADGLGSSFHC*FGLQSL
Trigger: CAGGCTTTGGAGACCAAATCAACAATGAAAACTGCT...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATTGCTGAGTGGACAGAAGAGCAGTTTTCATTGTTaGTTTGGTCTCCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GVGRVGGKRSLLLLSGQKSSFHC*FGLQSL
Trigger: CAGGCTTTGGAGACCAAATCAACAATGAAAACTGCT...CTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp ATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTCTCGTACTGCTCATTaGTGTACTTCTCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: MVTSSWDGLTRAEGALDESRTAH*CTSQWA
Trigger: AGCCCATTGAGAAGTACATCAATGAGCAGTACGAGA...CTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp TGGCAGCAGACATATAAAATACCTTCTCCAGGGAGGCTCAGATCATGGTTCAGGTGCGAACCCTTTGCTTaGATTCAGACTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WQQTYKIPSPGRLRSWFRCEPFA*IQTSPP
Trigger: TGGAGGAGAAGTCTGAATTCAAGCAAAGGGTTCGCA...CCTGAACCATGATCTGAGCCTCCCTGGAGAAGGTATTTTATATGTCTGCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp TCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGGTGCGAACCCTTTGCTTaGATTCAGACTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSNVFLGKPLFLSGCVMRCEPFA*IQTSPP
Trigger: TGGAGGAGAAGTCTGAATTCAAGCAAAGGGTTCGCA...CCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTGCGAACCCTTTGCTTaGATTCAGACTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRCEPFA*IQTSPP
Trigger: TGGAGGAGAAGTCTGAATTCAAGCAAAGGGTTCGCA...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp AACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGGCATGCTCTCCTGCCTaGTTTTGTCATTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: NSSNVFLGKPLFLSGCVMACSPA*FCHSPS
Trigger: AGACGGAGAATGACAAAATCAGGCAGGAGAGCATGC...CATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCATTTCTCCTGGTCCATTaGATCTTGGGTCTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAFLLVH*ILGLES
Trigger: AGACTCAAGACCCAAGATTCAATGGACCAGGAGAAA...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR GCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCCTTGCGAACCCTTTaGTTGAATTCAGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSSLRTL*LNSDFS
Trigger: GGAGAAGTCTGAATTCAAGCAAAGGGTTCGCAAGGA...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp GAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATAAAGGCATGCTCTCCTaGCTGATTTTGTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: EMVTSSWDGLTRAEGALDKGMLS*LILSFS
Trigger: GGAGAATGACAAAATCAGGCAGGAGAGCATGCCTTT...ATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp CCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAAAAGGCATGCTCTCCTaGCTGATTTTGTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: PLPLEMVTSSWDGLTRAEKGMLS*LILSFS
Trigger: GGAGAATGACAAAATCAGGCAGGAGAGCATGCCTTT...TTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTCAGGGCCTGTTCAGGTaGTTGACTACAGAAACTTTC +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALQGLFR*LTTETF
Trigger: GAAAGTTTCTGTAGTCAAGCACCTGAACAGGCCCTG...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR GCA 90 bp ATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTGGATAAATGGAGGATaGAACTGGCCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: MVTSSWDGLTRAEGALDEWINGG*NWPKEA
Trigger: TGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCA...CTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp AAGGAGACACCCTTGTCCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTTGGATAAATGGAGGATaGAACTGGCCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: KETPLSHFGAHTADLNESWINGG*NWPKEA
Trigger: TGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCA...AGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp AACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGTGATCCTAGCCCTTaGTCCCCAACATCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: NSSNVFLGKPLFLSGCVMSDPSP*SPTSVV
Trigger: CACTACAGATGTTGGGGAGCAAGGGCTAGGATCACT...CATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGCTCTTGCCATTCACTTaGTACTCCTTGTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: HADEWVGSNAIALRDGYKLLPFT*YSLSLP
Trigger: GGGAAGTGACAAGGAGTACCAAGTGAATGGCAAGAG...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGAGGGCAAACTCACAGTaGTTGAGGTTTTCCACTTCG +
Preference number: 4 (lower is better)
Translates to: HADEWVGSNAIALRDGYKRANSQ*LRFSTS
Trigger: CGAAGTGGAAAACCTCAACCACTGTGAGTTTGCCCT...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGAAGGTGGTTGGTGGTaGTATTTGGGATGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALEGGWW*YLGCVC
Trigger: ACACACACATCCCAAATACCACCACCAACCACCTTC...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTTGAGAGGAAGAAGGTaGTTGGTGGTGGTATTTGGG +
Preference number: 4 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRLRGRR*LVVVFG
Trigger: CCCAAATACCACCACCAACCACCTTCTTCCTCTCAA...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp CCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAAGGAGAGGAGTGGTTTaGATAAATGGAGGATGCAAC +
Preference number: 4 (lower is better)
Translates to: PLPLEMVTSSWDGLTRAERRGVV*INGGCN
Trigger: GTTGCATCCTCCATTTATCCAAACCACTCCTCTCCT...TTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp ATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGAGGAGAGGAGTGGTTTaGATAAATGGAGGATGCAAC +
Preference number: 4 (lower is better)
Translates to: MGLQGQKELLMSSFTLQMRRGVV*INGGCN
Trigger: GTTGCATCCTCCATTTATCCAAACCACTCCTCTCCT...CATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGGTTACAAGTAGCTaGGATGGGCTTACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VNSSNVFLGKPLFLSGCVMVTSS*DGLTRA
Trigger: TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCAT...AACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTATGGTTACAAGTAGCTaGGATGGGCTTACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRMVTSS*DGLTRA
Trigger: TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCAT...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATAGCGTGTACATATTGTaGGTTTCTGGGGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: DGLTRAEGALDEFFHPADSVYIL*VSGGLC
Trigger: ACACAAACCCCCAGAAACCCACAATATGTACACGCT...ATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp ATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGAGCAGTTTTCATTGTTaGTTTGGTCTCCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: MVTSSWDGLTRAEGALDESSFHC*FGLQSL
Trigger: CAGGCTTTGGAGACCAAATCAACAATGAAAACTGCT...CTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTTCTCGTACTGCTCATTaGTGTACTTCTCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALSRTAH*CTSQWA
Trigger: AGCCCATTGAGAAGTACATCAATGAGCAGTACGAGA...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp GTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTTCTCGTACTGCTCATTaGTGTACTTCTCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: VNSSNVFLGKPLFLSGCVSRTAH*CTSQWA
Trigger: AGCCCATTGAGAAGTACATCAATGAGCAGTACGAGA...AACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTAGTAAGCAGAAAAATTTCTTCCTGGCGATGTTaGCCTCCTCCTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: PTLGLTQLISMNLVSRKISSWRC*PPPSGT
Trigger: AGTTCCTGAAGGAGGAGGTCAACATCGCCAGGAAGA...AATTTTTCTGCTTACTAGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp GAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATTCCTATTCCTTTCTTTaGCCCAGATTTCTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: EMVTSSWDGLTRAEGALDSYSFL*PRFLWQ
Trigger: TTGCCAGAGAAATCTGGGTCAAAGAAAGGAATAGGA...ATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp TGGCAGCAGACATATAAAATACCTTCTCCAGGGAGGCTCAGATCATGGTTCAGGGCCTGTTCAGGTGCTTaGCTACAGAAACTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: WQQTYKIPSPGRLRSWFRACSGA*LQKLSF
Trigger: GAAAGAAAGTTTCTGTAGTCAAGCACCTGAACAGGC...CCTGAACCATGATCTGAGCCTCCCTGGAGAAGGTATTTTATATGTCTGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAAAAAGCCTAAATGTATaGCGGTGGGTATCATTGGGA +
Preference number: 4 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAKSLNV*RWVSLG
Trigger: TCCCAATGATACCCACCGTCATACATTTAGGCTTTT...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAAGAAAAATTGCTTTCTTaGCCCTTTAAGGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQEKLLS*PFKEAK
Trigger: CTTGGCTTCCTTAAAGGGTCAAGAAAGCAATTTTTC...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTGAAAAATTGCTTTCTTaGCCCTTTAAGGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPEKLLS*PFKEAK
Trigger: CTTGGCTTCCTTAAAGGGTCAAGAAAGCAATTTTTC...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAAGTGACCCACCCTCATaGATATCTTTAAGTAATGAA +
Preference number: 4 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQESDPPS*ISLSNE
Trigger: TTCATTACTTAAAGATATTCATGAGGGTGGGTCACT...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp CCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTAGTAAGCAGAAAAATTTCCATTAGCCTACAGTaGCCACCTGTGGTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: PTLGLTQLISMNLVSRKISISLQ*PPVVRL
Trigger: TAGCCTGACCACAGGTGGTCACTGTAGGCTAATGGA...AATTTTTCTGCTTACTAGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGCGTTTGTCTTTCCCTTaGTCAGAGGACAAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: HADEWVGSNAIALRDGYKRLSFP*SEDKKD
Trigger: ATCCTTCTTGTCCTCTGATCAAGGGAAAGACAAACG...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR GCA 90 bp TCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGGAAAGGCATGCTCTCCTaGCTGATTTTGTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: SSNVFLGKPLFLSGCVMRKGMLS*LILSFS
Trigger: GGAGAATGACAAAATCAGGCAGGAGAGCATGCCTTT...CCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGTGGATAAATGGAGGATaGAACTGGCCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GQKGASFSLACTYCGFLGWINGG*NWPKEA
Trigger: TGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCA...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGTGGATAAATGGAGGATaGAACTGGCCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: HADEWVGSNAIALRDGYKWINGG*NWPKEA
Trigger: TGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCA...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GTTTTCCCTTCCCTAAGGCTAAACTGTTTCCCTGGCCCCGAATTTCATGAATCTGATGACACAGAGAAGTaGTCGTCATGGGTTACTGTC +
Preference number: 4 (lower is better)
Translates to: VFPSLRLNCFPGPEFHESDDTEK*SSWVTV
Trigger: GACAGTAACCCATGACGACCACTTCTCTGTGTCATC...AGATTCATGAAATTCGGGGCCAGGGAAACAGTTTAGCCTTAGGGAAGGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTACAAACAGCTTTGTTTTaGGACACAAGGAAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLQTALF*DTRKGD
Trigger: GTCTCCTTTCCTTGTGTCCCAAAACAAAGCTGTTTG...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp GTTTTCCCTTCCCTAAGGCTAAACTGTTTCCCTGGCCCCGAATTTCATGAATCTACTGCCATCTGTCCTTaGAGAATCTCTATAGCCCCA +
Preference number: 4 (lower is better)
Translates to: VFPSLRLNCFPGPEFHESTAICP*RISIAP
Trigger: TGGGGCTATAGAGATTCTCCAAGGACAGATGGCAGT...AGATTCATGAAATTCGGGGCCAGGGAAACAGTTTAGCCTTAGGGAAGGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp TGGCAGCAGACATATAAAATACCTTCTCCAGGGAGGCTCAGATCATGGTTCAGGGTGGAGACCAGCAGCTaGCAGCAGACATATAAAATA +
Preference number: 4 (lower is better)
Translates to: WQQTYKIPSPGRLRSWFRVETSS*QQTYKI
Trigger: TATTTTATATGTCTGCTGCCAGCTGCTGGTCTCCAC...CCTGAACCATGATCTGAGCCTCCCTGGAGAAGGTATTTTATATGTCTGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp AAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAACATTCGCAGCGTGTACATATTGTaGGTTTCTGGGGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: KGEFYKDTVCGAVAVNIRSVYIL*VSGGLC
Trigger: ACACAAACCCCCAGAAACCCACAATATGTACACGCT...GCGAATGTTGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp GTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTAGCAGTTTTCATTGTTaGTTTGGTCTCCAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: VNSSNVFLGKPLFLSGCVSSFHC*FGLQSL
Trigger: CAGGCTTTGGAGACCAAATCAACAATGAAAACTGCT...AACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp CCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTAGTAAGCAGAAAAATTGCATGCTCTCCTGCCTaGTTTTGTCATTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: PTLGLTQLISMNLVSRKIACSPA*FCHSPS
Trigger: AGACGGAGAATGACAAAATCAGGCAGGAGAGCATGC...AATTTTTCTGCTTACTAGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp GGTAGCTTTGTGACACTGAACACGACACAGACTGAAGGGTGGAGCTCCATTTGTTGGCCCCGAATTTCATaGATCTTACAGATTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GSFVTLNTTQTEGWSSICWPRIS*ILQIKG
Trigger: TCCTTTAATCTGTAAGATTCATGAAATTCGGGGCCA...ACAAATGGAGCTCCACCCTTCAGTCTGTGTCGTGTTCAGTGTCACAAAGCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp ATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGAAAAATTGCTTTCTTaGCCCTTTAAGGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: MGLQGQKELLMSSFTLQMEKLLS*PFKEAK
Trigger: CTTGGCTTCCTTAAAGGGTCAAGAAAGCAATTTTTC...CATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp CCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTAGTAAGCAGAAAAATTGTCTTCTTGCGCATCTaGTCGATGATGGTGTCGATG +
Preference number: 4 (lower is better)
Translates to: PTLGLTQLISMNLVSRKIVFLRI*SMMVSM
Trigger: CATCGACACCATCATCGAGCAGATGCGCAAGAAGAC...AATTTTTCTGCTTACTAGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp GATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATAGGAACTTCTCGTACTaGTCATTGATGTACTTCTCA +
Preference number: 4 (lower is better)
Translates to: DGLTRAEGALDEFFHPADRNFSY*SLMYFS
Trigger: TGAGAAGTACATCAATGAGCAGTACGAGAAGTTCCT...ATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTAGGAACTTCTCGTACTaGTCATTGATGTACTTCTCA +
Preference number: 4 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSRNFSY*SLMYFS
Trigger: TGAGAAGTACATCAATGAGCAGTACGAGAAGTTCCT...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp CCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTAGTAAGCAGAAAAATTACACAGACTGAAGGGTaGAGCTCCATTTGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: PTLGLTQLISMNLVSRKITQTEG*SSICRH
Trigger: GTGCCTACAAATGGAGCTCCACCCTTCAGTCTGTGT...AATTTTTCTGCTTACTAGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp GTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCCAGCAGGTTGGAGTTaGTGCTCATGGGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: VCVFSFCLFVWTEESQLQPAGWS*CSWASW
Trigger: CCATGAAGCCCATGAGCATCAACTCCAACCTGCTGG...CTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAAAGTAAGCAGAAAAATTaGTTTCTTGACCCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQSKQKN*FLDPLR
Trigger: CCTTAAAGGGTCAAGAAAGCAATTTTTCTGCTTACT...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAACTCTTCCTCAGTGGCTaGGTTATGAGGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKLFLSG*VMRWGG
Trigger: TCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp GTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGTCTTCCTGGCGATGTTaGCCTCCTCCTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: VCVFSFCLFVWTEESQLQSSWRC*PPPSGT
Trigger: AGTTCCTGAAGGAGGAGGTCAACATCGCCAGGAAGA...CTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAATACCCTGTAACTTTGTaGGCAAGGGAGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKYPVTL*AREDEG
Trigger: GCCCTCATCCTCCCTTGCTCACAAAGTTACAGGGTA...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR TCA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGAGTGACCCACCCTCATaGATATCTTTAAGTAATGAA +
Preference number: 4 (lower is better)
Translates to: HADEWVGSNAIALRDGYKSDPPS*ISLSNE
Trigger: TTCATTACTTAAAGATATTCATGAGGGTGGGTCACT...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTAGTGACCCACCCTCATaGATATCTTTAAGTAATGAA +
Preference number: 4 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRSDPPS*ISLSNE
Trigger: TTCATTACTTAAAGATATTCATGAGGGTGGGTCACT...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp AACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGGAACTTCTCGTACTaGTCATTGATGTACTTCTCA +
Preference number: 4 (lower is better)
Translates to: NSSNVFLGKPLFLSGCVMRNFSY*SLMYFS
Trigger: TGAGAAGTACATCAATGAGCAGTACGAGAAGTTCCT...CATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAACACGAGTGTCAGGGATaGGTTTCTTCCTGGCGATGT +
Preference number: 4 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKHECQG*VSSWRC
Trigger: ACATCGCCAGGAAGAAACGCATCCCTGACACTCGTG...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp GTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCACGAGTGTCAGGGATaGGTTTCTTCCTGGCGATGT +
Preference number: 4 (lower is better)
Translates to: VCVFSFCLFVWTEESQLQHECQG*VSSWRC
Trigger: ACATCGCCAGGAAGAAACGCATCCCTGACACTCGTG...CTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp AAGGAGACACCCTTGTCCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTAGTAAGCAGAAAAATTaGTTTCTTGACCCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: KETPLSHFGAHTADLNESSKQKN*FLDPLR
Trigger: CCTTAAAGGGTCAAGAAAGCAATTTTTCTGCTTACT...AGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAAGTAAGCAGAAAAATTaGTTTCTTGACCCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: LTRAEGALDEFFHPADGLSKQKN*FLDPLR
Trigger: CCTTAAAGGGTCAAGAAAGCAATTTTTCTGCTTACT...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAACAGCTGTGCCCATCCTaGTTGTGTCCAAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKQLCPS*LCPKQE
Trigger: CTCTTGCTTTGGACACAAGCAGGATGGGCACAGCTG...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAACAGTGTGTGGGGCAGTaGCAGTCAACATTCGCAAAC +
Preference number: 4 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKQCVGQ*QSTFAN
Trigger: GTTTGCGAATGTTGACTGCCACTGCCCCACACACTG...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR TCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAACTGAGAGGAATGGAGTaGGAAGCAGCGCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKLRGME*EAALEM
Trigger: CATTTCAAGCGCTGCTTCTCACTCCATTCCTCTCAG...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp AACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGTGACCCACCCTCATaGATATCTTTAAGTAATGAA +
Preference number: 4 (lower is better)
Translates to: NSSNVFLGKPLFLSGCVMSDPPS*ISLSNE
Trigger: TTCATTACTTAAAGATATTCATGAGGGTGGGTCACT...CATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAAGTCTTCTTGCGCATCTaGTCGATGATGGTGTCGATG +
Preference number: 4 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKVFLRI*SMMVSM
Trigger: CATCGACACCATCATCGAGCAGATGCGCAAGAAGAC...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp TCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGGAGTAAGCAGAAAAATTaGTTTCTTGACCCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: SSNVFLGKPLFLSGCVMRSKQKN*FLDPLR
Trigger: CCTTAAAGGGTCAAGAAAGCAATTTTTCTGCTTACT...CCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAAAAGCAGCGCTTGAAATaGCCTTCATTCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKKQRLK*PSFSSG
Trigger: CCCACTGCTGAATGAAGGCCATTTCAAGCGCTGCTT...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR TCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAATGCAGCAATAACAGCTaGGAGGAATGGAGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKCSNNS*EEWSEK
Trigger: CTTCTCACTCCATTCCTCTCAGCTGTTATTGCTGCA...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR GCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAATTCTGTCCTGACAGGTaGCTACCCTGTAACTTTGTG +
Preference number: 4 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKFCPDR*LPCNFV
Trigger: CACAAAGTTACAGGGTAGGCACCTGTCAGGACAGAA...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAAATGGTTACAAGTAGCTaGGATGGGCTTACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKMVTSS*DGLTRA
Trigger: TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCAT...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGGCTCATGCAGATGAATaGGTAGGGAGCAATGCCATT +
Preference number: 4 (lower is better)
Translates to: VCVFSFCLFVWTEESQLQAHADE*VGSNAI
Trigger: AATGGCATTGCTCCCTACCCATTCATCTGCATGAGC...CTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CCA 90 bp GTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGTTGGTTGTAGATGAATaGCCCACAAGTCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: VCVFSFCLFVWTEESQLQLVVDE*PTSHQP
Trigger: AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAA...CTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR GCA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAATGGATAAATGGAGGATaGAACTGGCCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKWINGG*NWPKEA
Trigger: TGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCA...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR CAA 72 bp TCTGGGGGTTTGTGTGTGTGTTTAGTTTTTGTTTGTTaGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTC +
Preference number: 4 (lower is better)
Translates to: SGGLCVCLVFVC*FGQKKVNSSNV
Trigger: GACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACACAAACCCCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
3UTR CAA 72 bp TTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGGTTaGTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: FLSVYILWVSGG*CVCLVFVCLFG
Trigger: TCCAAACAAACAAACAAAAACTAAACACACACACAAACCCCCAGAAACCCACAATATGTACACGCTAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS CCA 90 bp TGGCAGCTGCGGGCGGCCGTGAGCGCGCGTGAGTCACGCGGGGGCTaGGGTGTTGCGCGGGTGCCTGTAGAGCCGAGTCAGGGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: WQLRAAVSARESRGG*GVARVPVEPSQGPG
Trigger: CCCGGGCCCCTGACTCGGCTCTACAGGCACCCGCGCAACACCCCAGCCCCCGCGTGACTCACGCGCGCTCACGGCCGCCCGCAGCTGCCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449288.5
CDS CCA 90 bp CCCCCAGAGCGATGCCCGTCTCCTGTGGGGGCACACTCCGGGTCCTaGCTCCAAGGCCCAGCCGGCTGGAGGTCTGTGGGATATGGCTTT +
Preference number: 5 (lower is better)
Translates to: PPERCPSPVGAHSGS*LQGPAGWRSVGYGF
Trigger: AAAGCCATATCCCACAGACCTCCAGCCGGCTGGGCCTTGGAGCCAGGACCCGGAGTGTGCCCCCACAGGAGACGGGCATCGCTCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS TCA 90 bp CTTCATGGGCACCGCTGGCTTAGGCCTGGGCTCAGGCACCAGCTCTaGCATGGCTGCGTCCGTCCTGGTCTCTGGGAGCCCCACTGGGCT +
Preference number: 5 (lower is better)
Translates to: LHGHRWLRPGLRHQL*HGCVRPGLWEPHWA
Trigger: AGCCCAGTGGGGCTCCCAGAGACCAGGACGGACGCAGCCATGTCAGAGCTGGTGCCTGAGCCCAGGCCTAAGCCAGCGGTGCCCATGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449288.5
CDS CCA 90 bp CCTGTGGGGGCACACTCCGGGTCCTGGCTCCAAGGCCCAGCCGGCTaGAGGTCTGTGGGATATGGCTTTGGGGGAAGGTATCCAGATGGA +
Preference number: 5 (lower is better)
Translates to: PVGAHSGSWLQGPAG*RSVGYGFGGRYPDG
Trigger: TCCATCTGGATACCTTCCCCCAAAGCCATATCCCACAGACCTCCAGCCGGCTGGGCCTTGGAGCCAGGACCCGGAGTGTGCCCCCACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 90 bp ATCCTGTTGGATTTGGTCAGACCTGGGTTCCCTGGGCCCTCAGAGTaGACCCTGCCCCCTGGCACTAGGGTCACAGGTGGCGAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: ILLDLVRPGFPGPSE*TLPPGTRVTGGEPG
Trigger: GCCAGGCTCGCCACCTGTGACCCTAGTGCCAGGGGGCAGGGTCCACTCTGAGGGCCCAGGGAACCCAGGTCTGACCAAATCCAACAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS TCA 90 bp CTTCATGGGCACCGCTGGCTTAGGCCTGGGCTCAGGCACCAGCTCTaGCATGGCTGCGTCCGTCCTGGTCTCTGGGAGCCCTTTGGACAT +
Preference number: 5 (lower is better)
Translates to: LHGHRWLRPGLRHQL*HGCVRPGLWEPFGH
Trigger: ATGTCCAAAGGGCTCCCAGAGACCAGGACGGACGCAGCCATGTCAGAGCTGGTGCCTGAGCCCAGGCCTAAGCCAGCGGTGCCCATGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
CDS TCA 90 bp CTTCATGGGCACCGCTGGCTTAGGCCTGGGCTCAGGCACCAGCTCTaGCATGGCTGCGTCCGTCCTGGTCTCTGGGAGCCCTTTGTATTC +
Preference number: 5 (lower is better)
Translates to: LHGHRWLRPGLRHQL*HGCVRPGLWEPFVF
Trigger: GAATACAAAGGGCTCCCAGAGACCAGGACGGACGCAGCCATGTCAGAGCTGGTGCCTGAGCCCAGGCCTAAGCCAGCGGTGCCCATGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 90 bp CTGGCTCCAAGGCCCAGCCGGCTGGAGGTCTGTGGGATATGGCTTTaGGGGAAGGTATCCAGATGGATGGTCTTCCTGAGGACGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LAPRPSRLEVCGIWL*GKVSRWMVFLRTGV
Trigger: CACCCCCGTCCTCAGGAAGACCATCCATCTGGATACCTTCCCCCAAAGCCATATCCCACAGACCTCCAGCCGGCTGGGCCTTGGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 90 bp CGGGTCCTGGCTCCAAGGCCCAGCCGGCTGGAGGTCTGTGGGATATaGCTTTGGGGGAAGGTATCCAGATGGATGGTCTTCCTGAGGACG +
Preference number: 5 (lower is better)
Translates to: RVLAPRPSRLEVCGI*LWGKVSRWMVFLRT
Trigger: CGTCCTCAGGAAGACCATCCATCTGGATACCTTCCCCCAAAGCCATATCCCACAGACCTCCAGCCGGCTGGGCCTTGGAGCCAGGACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp AGGGGCTGTGGTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGGGAGGGAGGCCTCCATaGTCATTGAGCCGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: RGCGGELDEHSTKKGLALGGRPP*SLSRLA
Trigger: GGCCAAGCGGCTCAATGACAATGGAGGCCTCCCTCC...CAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGGCCAGCTTAGGGGCCTaGTCCCTCTGGTCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWASLGA*SLWSPP
Trigger: AGGAGGGGACCAGAGGGACAAGGCCCCTAAGCTGGC...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS GCA 90 bp CCTGGAGAAGCTCTGGTAGGCATGTGGTCAGTCACTGAGACAAGGTaGCCCTGGCCCAACGAGCCTGGCTCTGCAAGGACTGGTGCACTC +
Preference number: 5 (lower is better)
Translates to: PGEALVGMWSVTETR*PWPNEPGSARTGAL
Trigger: GAGTGCACCAGTCCTTGCAGAGCCAGGCTCGTTGGGCCAGGGGCACCTTGTCTCAGTGACTGACCACATGCCTACCAGAGCTTCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 90 bp CACACTCCGGGTCCTGGCTCCAAGGCCCAGCCGGCTGGAGGTCTGTaGGATATGGCTTTGGGGGAAGGTATCCAGATGGATGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: HTPGPGSKAQPAGGL*DMALGEGIQMDGLP
Trigger: AGGAAGACCATCCATCTGGATACCTTCCCCCAAAGCCATATCCCACAGACCTCCAGCCGGCTGGGCCTTGGAGCCAGGACCCGGAGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 90 bp GAAGCTCTGGTAGGCATGTGGTCAGTCACTGAGACAAGGTGCCCCTaGCCCAACGAGCCTGGCTCTGCAAGGACTGGTGCACTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: EALVGMWSVTETRCP*PNEPGSARTGALWA
Trigger: AGCCCAGAGTGCACCAGTCCTTGCAGAGCCAGGCTCGTTGGGCCAGGGGCACCTTGTCTCAGTGACTGACCACATGCCTACCAGAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGTTCCAGCTGGAGGCCTaGCGGCTCACTTGGGATTTG +
Preference number: 5 (lower is better)
Translates to: PADADDAVGLYWQNPTPLFQLEA*RLTWDL
Trigger: CAAATCCCAAGTGAGCCGCAAGGCCTCCAGCTGGAA...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGGCGGAGGGAGGCCTCCATaGTCATTGAGCCGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SHQPLSKLCPGGDRKRVGGGRPP*SLSRLA
Trigger: GGCCAAGCGGCTCAATGACAATGGAGGCCTCCCTCC...GCCCACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTATGGCTGTGCCCGGCTaGATTGTGCCTGCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVMAVPG*IVPAVA
Trigger: GGCTACAGCAGGCACAATCAAGCCGGGCACAGCCAT...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS TCA 90 bp CTTGCCTTTTCCTGGAGAAGCTCTGGTAGGCATGTGGTCAGTCACTaGGACAAGGTGCCCCTGGCCCAACGAGCCTGGCTCTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: LAFSWRSSGRHVVSH*DKVPLAQRAWLCKD
Trigger: GTCCTTGCAGAGCCAGGCTCGTTGGGCCAGGGGCACCTTGTCTCAGTGACTGACCACATGCCTACCAGAGCTTCTCCAGGAAAAGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp CTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCTTCCAGCTGGAGGCCTaGCGGCTCACTTGGGATTTG +
Preference number: 5 (lower is better)
Translates to: LSGCVMRWGGCTTALWDSFQLEA*RLTWDL
Trigger: CAAATCCCAAGTGAGCCGCAAGGCCTCCAGCTGGAA...GCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGTTCCAGCTGGAGGCCTaGCGGCTCACTTGGGATTTG +
Preference number: 5 (lower is better)
Translates to: ADDAVGLYWQNPTPLGGEFQLEA*RLTWDL
Trigger: CAAATCCCAAGTGAGCCGCAAGGCCTCCAGCTGGAA...CTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGTTGTGTGTCACTTCCTaGAGGTCCTGGAGGTGGGTC +
Preference number: 5 (lower is better)
Translates to: PADADDAVGLYWQNPTPLLCVTS*RSWRWV
Trigger: GACCCACCTCCAGGACCTCAAGGAAGTGACACACAA...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCAGCAATAACGGAGGGAGGCCTCCATaGTCATTGAGCCGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: VVSWTSTALKRAWPCSNNGGRPP*SLSRLA
Trigger: GGCCAAGCGGCTCAATGACAATGGAGGCCTCCCTCC...GTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGCTAGGCGTGGGCCTCTaGCTCCATCAGGACTTGGTT +
Preference number: 5 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWLGVGL*LHQDLV
Trigger: AACCAAGTCCTGATGGAGCAAGAGGCCCACGCCTAG...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGAGAAACGGGTTGTTCTaGCATCCCCTAGGCGTGGGC +
Preference number: 5 (lower is better)
Translates to: ADDAVGLYWQNPTPLGGERNGLF*HPLGVG
Trigger: GCCCACGCCTAGGGGATGCAAGAACAACCCGTTTCT...CTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAAGTCGTGTTGGCCCTTaGGAGACGCCCCCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQESRVGP*ETPPGS
Trigger: AGACCCCGGGGGCGTCTCCAAAGGGCCAACACGACT...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGGGCCTTGCGGCTCACTaGGGATTTGAAGAGCGTGTT +
Preference number: 5 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQGLAAH*GFEERV
Trigger: AACACGCTCTTCAAATCCCAAGTGAGCCGCAAGGCC...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGGGCCTTGCGGCTCACTaGGGATTTGAAGAGCGTGTT +
Preference number: 5 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWGLAAH*GFEERV
Trigger: AACACGCTCTTCAAATCCCAAGTGAGCCGCAAGGCC...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGACATGCCCGATAGCTTaGATCTCCACTGTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: PADADDAVGLYWQNPTPLTCPIA*ISTVLG
Trigger: CCCCAAGACAGTGGAGATCAAAGCTATCGGGCATGT...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGAGGGAGGCCTCCATaGTCATTGAGCCGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: VLAEPHSTGRRGVVWINGGGRPP*SLSRLA
Trigger: GGCCAAGCGGCTCAATGACAATGGAGGCCTCCCTCC...TCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGCTTGTAGCCATGGCTTaGCCCAGCTTGTCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: PADADDAVGLYWQNPTPLLVAMA*PSLSGS
Trigger: AGAACCAGACAAGCTGGGCAAAGCCATGGCTACAAG...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS TCA 90 bp GCCCGGCTTGATTGTGCCTGCTGTAGCCAAGTTCACGGTTTTGCCTaGCTTGACTGTCCCTACCGAAGACAAGTCTCTGGCTGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: ARLDCACCSQVHGFA*LDCPYRRQVSGCAQ
Trigger: CTGGGCACAGCCAGAGACTTGTCTTCGGTAGGGACAGTCAAGTCAGGCAAAACCGTGAACTTGGCTACAGCAGGCACAATCAAGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp CTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCGTCTCTGGGAGCCCTTaGGACATGAATCCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: LSGCVMRWGGCTTALWDSVSGSP*DMNPPL
Trigger: CAAAGGAGGATTCATGTCCAAAGGGCTCCCAGAGAC...GCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
CDS-3UTR CAA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTACATGCCCGATAGCTTaGATCTCCACTGTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVTCPIA*ISTVLG
Trigger: CCCCAAGACAGTGGAGATCAAAGCTATCGGGCATGT...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGATTGTGTGTCACTTCCTaGAGGTCCTGGAGGTGGGTC +
Preference number: 5 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGLCVTS*RSWRWV
Trigger: GACCCACCTCCAGGACCTCAAGGAAGTGACACACAA...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGAGGAGGGAGGCCTCCATaGTCATTGAGCCGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: TRAEGALDEFFHPADGLGGGRPP*SLSRLA
Trigger: GGCCAAGCGGCTCAATGACAATGGAGGCCTCCCTCC...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTCTCTATAGCCCCAGTTaGTGTGCAGGTTCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVLYSPS*CAGSER
Trigger: TCTCTCGGAACCTGCACACAAACTGGGGCTATAGAG...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp AGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAATGAAGGAGACACCCTaGTCCCACTTTGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: RAVLAEPHSTGRRGVVWIMKETP*SHFGAH
Trigger: GTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTTCAT...TATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATACAGCCTTTGAGCAAGTaGTGTCCAGGTGGAGACAGG +
Preference number: 5 (lower is better)
Translates to: RAVLAEPHSTGRRGVVWIQPLSK*CPGGDR
Trigger: CCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTG...TATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp AGGGGCTGTGGTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGTTGCTCCATCAGGACTaGGTTGTAGATGAATGGCCC +
Preference number: 5 (lower is better)
Translates to: RGCGGELDEHSTKKGLALLLHQD*VVDEWP
Trigger: GGGCCATTCATCTACAACCAAGTCCTGATGGAGCAA...CAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGTTGCTCCATCAGGACTaGGTTGTAGATGAATGGCCC +
Preference number: 5 (lower is better)
Translates to: PADADDAVGLYWQNPTPLLLHQD*VVDEWP
Trigger: GGGCCATTCATCTACAACCAAGTCCTGATGGAGCAA...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGAGTGGCAAGCATCCTGTaGGATTTGGTCAGACCTGGG +
Preference number: 5 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGVASIL*DLVRPG
Trigger: CCCAGGTCTGACCAAATCCAACAGGATGCTTGCCAC...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp AGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGGCAAATTCACAGTCGTGTaGGCCCTTTGGAGACGCCCC +
Preference number: 5 (lower is better)
Translates to: SHQPLSKLCPGGDRKRVGKFTVV*ALWRRP
Trigger: GGGGCGTCTCCAAAGGGCCAACACGACTGTGAATTT...GCCCACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 90 bp GTATGTGTGATGACACAGAGAAGTGGTCGTCATGGGTTACTGTCGTaGCTTTCCTCTGTGTCCACGCTCACCGGAGGGAGGCCTCCATTG +
Preference number: 5 (lower is better)
Translates to: VCVMTQRSGRHGLLS*LSSVSTLTGGRPPL
Trigger: CAATGGAGGCCTCCCTCCGGTGAGCGTGGACACAGAGGAAAGCCACGACAGTAACCCATGACGACCACTTCTCTGTGTCATCACACATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS CCA 90 bp ATTGGAAAGGTAAGGCTAGGTAGGAACTCACCAGGGGCTTCTCCGTaGCAAGCATCCTGTTGGATTTGGTCAGACCTGGGTTCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: IGKVRLGRNSPGASP*QASCWIWSDLGSLG
Trigger: GCCCAGGGAACCCAGGTCTGACCAAATCCAACAGGATGCTTGCCACGGAGAAGCCCCTGGTGAGTTCCTACCTAGCCTTACCTTTCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGCCAACGACCATGATGTaGAAGTCGAAACCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWPTTMM*KSKPVF
Trigger: GAAGACCGGTTTCGACTTCAACATCATGGTCGTTGG...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGCCAACGACCATGATGTaGAAGTCGAAACCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: ADDAVGLYWQNPTPLGGEPTTMM*KSKPVF
Trigger: GAAGACCGGTTTCGACTTCAACATCATGGTCGTTGG...CTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTGATTTGAAGAGCGTGTaGACCAGCGTTGATTTGCCC +
Preference number: 5 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVDLKSV*TSVDLP
Trigger: GGGCAAATCAACGCTGGTCAACACGCTCTTCAAATC...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCAGCAATAACCGGCTCACTTGGGATTaGAAGAGCGTGTTGACCAGC +
Preference number: 5 (lower is better)
Translates to: VVSWTSTALKRAWPCSNNRLTWD*KSVLTS
Trigger: GCTGGTCAACACGCTCTTCAAATCCCAAGTGAGCCG...GTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGGGCTTCTTCCTGGCGATGTaGACCTCCTCCTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: SHQPLSKLCPGGDRKRVGFFLAM*TSSFRN
Trigger: GTTCCTGAAGGAGGAGGTCAACATCGCCAGGAAGAA...GCCCACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGATTCTTCCTGGCGATGTaGACCTCCTCCTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGFFLAM*TSSFRN
Trigger: GTTCCTGAAGGAGGAGGTCAACATCGCCAGGAAGAA...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGAGGAGAGGAGTGGTTaGGATAAATGGAGGATGCAA +
Preference number: 5 (lower is better)
Translates to: PADADDAVGLYWQNPTPLEERSG*DKWRMQ
Trigger: TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTC...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGCACCCTTGTCCCACTTaGGGGCTCACACAGCTGATC +
Preference number: 5 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVHPCPT*GLTQLI
Trigger: GATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTG...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp TGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGCACCCTTGTCCCACTTaGGGGCTCACACAGCTGATC +
Preference number: 5 (lower is better)
Translates to: CTGRTPLHWEERSGLDKWHPCPT*GLTQLI
Trigger: GATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTG...CCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CCGGCTGACGCAGATGATGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGCATTTAAGAAACGGGTaGTTCTTGCATCCCCTAGGC +
Preference number: 5 (lower is better)
Translates to: PADADDAVGLYWQNPTPLHLRNG*FLHPLG
Trigger: GCCTAGGGGATGCAAGAACAACCCGTTTCTTAAATG...CAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCATCATCTGCGTCAGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp AGGGGCTGTGGTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCATTTAAGAAACGGGTaGTTCTTGCATCCCCTAGGC +
Preference number: 5 (lower is better)
Translates to: RGCGGELDEHSTKKGLALHLRNG*FLHPLG
Trigger: GCCTAGGGGATGCAAGAACAACCCGTTTCTTAAATG...CAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCACCACAGCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp CTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGTGACGGTTTTGCCTGACTaGACTGTCCCTACCGAAGAC +
Preference number: 5 (lower is better)
Translates to: LRYEVGRMYNRTLGQPQVTVLPD*TVPTED
Trigger: GTCTTCGGTAGGGACAGTCAAGTCAGGCAAAACCGT...CACTTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS TCA 90 bp TTTCCTCTGTGTCCACGCTCACCGGAGGGAGGCCTCCATTGTCATTaGGCCGCTTGGCCCTGTAAGTCTCATAGTGGATGTTGTGTGTCA +
Preference number: 5 (lower is better)
Translates to: FPLCPRSPEGGLHCH*AAWPCKSHSGCCVS
Trigger: TGACACACAACATCCACTATGAGACTTACAGGGCCAAGCGGCTCAATGACAATGGAGGCCTCCCTCCGGTGAGCGTGGACACAGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS CCA 90 bp GTGTGTGAAGTGGGTATGTGTGATGACACAGAGAAGTGGTCGTCATaGGTTACTGTCGTGGCTTTCCTCTGTGTCCACGCTCACCGGAGG +
Preference number: 5 (lower is better)
Translates to: VCEVGMCDDTEKWSS*VTVVAFLCVHAHRR
Trigger: CCTCCGGTGAGCGTGGACACAGAGGAAAGCCACGACAGTAACCCATGACGACCACTTCTCTGTGTCATCACACATACCCACTTCACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp GTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCAGCAATAACGTCTCTGGGAGCCCTTaGGACATGAATCCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: VVSWTSTALKRAWPCSNNVSGSP*DMNPPL
Trigger: CAAAGGAGGATTCATGTCCAAAGGGCTCCCAGAGAC...GTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
CDS-3UTR CAA 90 bp GGGTGGGCAAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCACCCAGCAGGTTGGAGTaGATGCTCATGGGCTTCATG +
Preference number: 5 (lower is better)
Translates to: GWAKGNSIKTQCVGQWQSPSRLE*MLMGFM
Trigger: CATGAAGCCCATGAGCATCAACTCCAACCTGCTGGG...TGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTTGCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAACCCAGCAGGTTGGAGTaGATGCTCATGGGCTTCATG +
Preference number: 5 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQEPSRLE*MLMGFM
Trigger: CATGAAGCCCATGAGCATCAACTCCAACCTGCTGGG...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp TGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGCCCAGCAGGTTGGAGTaGATGCTCATGGGCTTCATG +
Preference number: 5 (lower is better)
Translates to: CTGRTPLHWEERSGLDKWPSRLE*MLMGFM
Trigger: CATGAAGCCCATGAGCATCAACTCCAACCTGCTGGG...CCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp AGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAGATTTGAAGAGCGTGTaGACCAGCGTTGATTTGCCC +
Preference number: 5 (lower is better)
Translates to: RAVLAEPHSTGRRGVVWIDLKSV*TSVDLP
Trigger: GGGCAAATCAACGCTGGTCAACACGCTCTTCAAATC...TATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGATTCCAGCTGGAGGCCTaGCGGCTCACTTGGGATTTG +
Preference number: 5 (lower is better)
Translates to: TRAEGALDEFFHPADGLGFQLEA*RLTWDL
Trigger: CAAATCCCAAGTGAGCCGCAAGGCCTCCAGCTGGAA...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CAGCCTTACCCCCAGACCACCCCCAACTTACAGGAGGGTTGTCCTGAACTCCCTTTGCGAACCCTTTGCTaGAATTCAGACTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QPYPQTTPNLQEGCPELPLRTLC*NSDFSS
Trigger: GGAGGAGAAGTCTGAATTCAAGCAAAGGGTTCGCAA...AGGGAGTTCAGGACAACCCTCCTGTAAGTTGGGGGTGGTCTGGGGGTAAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp AGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGTTGCGAACCCTTTGCTaGAATTCAGACTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SRAVLAEPHSTGRRGVVWLRTLC*NSDFSS
Trigger: GGAGGAGAAGTCTGAATTCAAGCAAAGGGTTCGCAA...CCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGGAGGAGAGGAGTGGTTaGGATAAATGGAGGATGCAA +
Preference number: 5 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQEERSG*DKWRMQ
Trigger: TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTC...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCCACCCTTGTCCCACTTaGGGGCTCACACAGCTGATC +
Preference number: 5 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGHPCPT*GLTQLI
Trigger: GATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTG...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAATGAAGGAGACACCCTaGTCCCACTTTGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQEMKETP*SHFGAH
Trigger: GTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTTCAT...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAACAGCCTTTGAGCAAGTaGTGTCCAGGTGGAGACAGG +
Preference number: 5 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQEQPLSK*CPGGDR
Trigger: CCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTG...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGCAGCCTTTGAGCAAGTaGTGTCCAGGTGGAGACAGG +
Preference number: 5 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVQPLSK*CPGGDR
Trigger: CCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTG...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGACTAGGCGTGGGCCTCTaGCTCCATCAGGACTTGGTT +
Preference number: 5 (lower is better)
Translates to: TRAEGALDEFFHPADGLGLGVGL*LHQDLV
Trigger: AACCAAGTCCTGATGGAGCAAGAGGCCCACGCCTAG...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATTGCTGAGTGGACAGAAGAGAAACGGGTTGTTCTaGCATCCCCTAGGCGTGGGC +
Preference number: 5 (lower is better)
Translates to: GVGRVGGKRSLLLLSGQKRNGLF*HPLGVG
Trigger: GCCCACGCCTAGGGGATGCAAGAACAACCCGTTTCT...CTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS TCA 90 bp GGCTGTGCTTCTTGTAGCCATGGCTTTGCCCAGCTTGTCTGGTTCTaGGGCTATCAAATCCATGACCATCCCTGGCTTGGTTGTCCCAAC +
Preference number: 5 (lower is better)
Translates to: GCASCSHGFAQLVWF*GYQIHDHPWLGCPN
Trigger: GTTGGGACAACCAAGCCAGGGATGGTCATGGATTTGATAGCCTCAGAACCAGACAAGCTGGGCAAAGCCATGGCTACAAGAAGCACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 90 bp ATTGCAGGCAGGTGGGAATGGCTTCCTGCTTACTGCAGAGGGCCTTaGGGAAACATCACTTGGATTCCATATTCTCTCCTTCCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: IAGRWEWLPAYCRGP*GNITWIPYSLLPRA
Trigger: GGCTCTGGGAAGGAGAGAATATGGAATCCAAGTGATGTTTCCCCAAGGCCCTCTGCAGTAAGCAGGAAGCCATTCCCACCTGCCTGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460267.1
CDS-3UTR CAA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTTTGACCAGCGTTGATTaGCCCAGTCCACTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPLTSVD*PSPLWP
Trigger: TGGCCAGAGTGGACTGGGCAAATCAACGCTGGTCAA...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATTGCTGAGTGGACAGAAGTTGACCAGCGTTGATTaGCCCAGTCCACTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: GVGRVGGKRSLLLLSGQKLTSVD*PSPLWP
Trigger: TGGCCAGAGTGGACTGGGCAAATCAACGCTGGTCAA...CTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAACATGCCCGATAGCTTaGATCTCCACTGTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: VLAEPHSTGRRGVVWINGTCPIA*ISTVLG
Trigger: CCCCAAGACAGTGGAGATCAAAGCTATCGGGCATGT...TCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTGTTTTCATTGTTGATTaGGTCTCCAAAGCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVVFIVD*VSKAWG
Trigger: ACCCCAGGCTTTGGAGACCAAATCAACAATGAAAAC...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGATTCTTCCTGGCGATGTaGACCTCCTCCTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: VLAEPHSTGRRGVVWINGFFLAM*TSSFRN
Trigger: GTTCCTGAAGGAGGAGGTCAACATCGCCAGGAAGAA...TCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACTCCTTGCGAACCCTTaGCTTGAATTCAGACTTCTC +
Preference number: 5 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGLLANP*LEFRLL
Trigger: GAGAAGTCTGAATTCAAGCAAAGGGTTCGCAAGGAG...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAACTCCTTGCGAACCCTTaGCTTGAATTCAGACTTCTC +
Preference number: 5 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQLLANP*LEFRLL
Trigger: GAGAAGTCTGAATTCAAGCAAAGGGTTCGCAAGGAG...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAGTGGCAAACTCACAGTGGTaGAGGTTTTCCACTTCGATG +
Preference number: 5 (lower is better)
Translates to: LRYEVGRMYNRTLGQPQVANSQW*RFSTSM
Trigger: CATCGAAGTGGAAAACCTCAACCACTGTGAGTTTGC...CACTTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGTTCCGAGAGAAGAGTaGCCTGTGGCTCACCTGCTC +
Preference number: 5 (lower is better)
Translates to: DGLTRAEGALDEFFHPADVPREE*PVAHLL
Trigger: GAGCAGGTGAGCCACAGGCAACTCTTCTCTCGGAAC...ATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp GTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGACACTGCCATCTGTCCTaGGAGAATCTCTATAGCCCC +
Preference number: 5 (lower is better)
Translates to: VLAEPHSTGRRGVVWINGHCHLS*ENLYSP
Trigger: GGGGCTATAGAGATTCTCCAAGGACAGATGGCAGTG...TCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp ATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGCACCCTTGTCCCACTTaGGGGCTCACACAGCTGATC +
Preference number: 5 (lower is better)
Translates to: MGLQGQKELLMSSFTLQMHPCPT*GLTQLI
Trigger: GATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTG...CATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GGTAGCTTTGTGACACTGAACACGACACAGACTGAAGGGTGGAGCTCCATTTGTCACCCTTGTCCCACTTaGGGGCTCACACAGCTGATC +
Preference number: 5 (lower is better)
Translates to: GSFVTLNTTQTEGWSSICHPCPT*GLTQLI
Trigger: GATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTG...ACAAATGGAGCTCCACCCTTCAGTCTGTGTCGTGTTCAGTGTCACAAAGCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGAATGAAGGAGACACCCTaGTCCCACTTTGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: TRAEGALDEFFHPADGLGMKETP*SHFGAH
Trigger: GTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTTCAT...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAAGAGATCCCTCTTATaGCTGAGTGGACAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: RAVLAEPHSTGRRGVVWIKRSLL*LSGQKG
Trigger: ACCCTTCTGTCCACTCAGCAATAAGAGGGATCTCTT...TATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCAGCAATAACACAAGTCACCAGCCTTaGAGCAAGTTGTGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: VVSWTSTALKRAWPCSNNTSHQP*SKLCPG
Trigger: ACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT...GTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GTGGTGAGCTGGACGAGCACAGCACTAAAAAGGGCTTGGCCCTGCAGCAATAACTTGCTCCATCAGGACTaGGTTGTAGATGAATGGCCC +
Preference number: 5 (lower is better)
Translates to: VVSWTSTALKRAWPCSNNLLHQD*VVDEWP
Trigger: GGGCCATTCATCTACAACCAAGTCCTGATGGAGCAA...GTTATTGCTGCAGGGCCAAGCCCTTTTTAGTGCTGTGCTCGTCCAGCTCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAAGAAACGGGTTGTTCTaGCATCCCCTAGGCGTGGGC +
Preference number: 5 (lower is better)
Translates to: LTRAEGALDEFFHPADGLRNGLF*HPLGVG
Trigger: GCCCACGCCTAGGGGATGCAAGAACAACCCGTTTCT...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GGGTGGGCAAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAGCCAAGCTAGGTCTGTaGGTGGCCATTGTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: GWAKGNSIKTQCVGQWQSAKLGL*VAIVAK
Trigger: TTTAGCCACAATGGCCACCAACAGACCTAGCTTGGC...TGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTTGCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGTTTGGTGTGGCTAAATaGATAGCCAAGCTAGGTCTG +
Preference number: 5 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQFGVAK*IAKLGL
Trigger: CAGACCTAGCTTGGCTATCAATTTAGCCACACCAAA...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp GTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGTGATTGTGTCCGGCTaGACTGGGTCTGATGTTGCT +
Preference number: 5 (lower is better)
Translates to: VLAEPHSTGRRGVVWINGVIVSG*TGSDVA
Trigger: AGCAACATCAGACCCAGTCAAGCCGGACACAATCAC...TCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp CTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGTCTCTGGGAGCCCTTaGTATTCTGTGGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LTRAEGALDEFFHPADGLVSGSP*YSVARS
Trigger: GGACCTGGCCACAGAATACAAAGGGCTCCCAGAGAC...TAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 90 bp CCCAGCTTGATATCCAGGGCAGGGAACTCTGTGCCTGTGTCCAGTTaGGATGTGTTTGGTGTGGCTAAATTGATAGCCAAGCTAGGTCTG +
Preference number: 5 (lower is better)
Translates to: PSLISRAGNSVPVSS*DVFGVAKLIAKLGL
Trigger: CAGACCTAGCTTGGCTATCAATTTAGCCACACCAAACACATCCCAACTGGACACAGGCACAGAGTTCCCTGCCCTGGATATCAAGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAAGTCTCTGGGAGCCCTTaGGACATGAATCCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQVSGSP*DMNPPL
Trigger: CAAAGGAGGATTCATGTCCAAAGGGCTCCCAGAGAC...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
CDS-3UTR CAA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGCCAACGACCATGATGTaGAAGTCGAAACCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVPTTMM*KSKPVF
Trigger: GAAGACCGGTTTCGACTTCAACATCATGGTCGTTGG...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp ATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGTTGACCAGCGTTGATTaGCCCAGTCCACTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: MGLQGQKELLMSSFTLQMLTSVD*PSPLWP
Trigger: TGGCCAGAGTGGACTGGGCAAATCAACGCTGGTCAA...CATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGATTTGAAGAGCGTGTaGACCAGCGTTGATTTGCCC +
Preference number: 5 (lower is better)
Translates to: VLAEPHSTGRRGVVWINGDLKSV*TSVDLP
Trigger: GGGCAAATCAACGCTGGTCAACACGCTCTTCAAATC...TCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAACGGCTCACTTGGGATTaGAAGAGCGTGTTGACCAGC +
Preference number: 5 (lower is better)
Translates to: PLPLEMVTSSWDGLTRAERLTWD*KSVLTS
Trigger: GCTGGTCAACACGCTCTTCAAATCCCAAGTGAGCCG...TTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATCGGCTCACTTGGGATTaGAAGAGCGTGTTGACCAGC +
Preference number: 5 (lower is better)
Translates to: EMVTSSWDGLTRAEGALDRLTWD*KSVLTS
Trigger: GCTGGTCAACACGCTCTTCAAATCCCAAGTGAGCCG...ATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp TGCAGTAGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTCCCAGCAGTTTTCATaGTTGATTTGGTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: CSRAVLAEPHSTGRRGVVSQQFS*LIWSPK
Trigger: CTTTGGAGACCAAATCAACAATGAAAACTGCTGGGA...AACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCTACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGATTCTTCCTGGCGATGTaGACCTCCTCCTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: TRAEGALDEFFHPADGLGFFLAM*TSSFRN
Trigger: GTTCCTGAAGGAGGAGGTCAACATCGCCAGGAAGAA...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGTTTACTTCAAGCTCCTaGCGAACCCTTTGCTTGAAT +
Preference number: 5 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQFTSSS*RTLCLN
Trigger: ATTCAAGCAAAGGGTTCGCAAGGAGCTTGAAGTAAA...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATTTGTGTGTCACTTCCTaGAGGTCCTGGAGGTGGGTC +
Preference number: 5 (lower is better)
Translates to: EMVTSSWDGLTRAEGALDLCVTS*RSWRWV
Trigger: GACCCACCTCCAGGACCTCAAGGAAGTGACACACAA...ATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGTTCCTATTCCTTTCTTaGACCCAGATTTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: PQWLRYEVGRMYNRTLGQFLFLS*TQISLA
Trigger: TGCCAGAGAAATCTGGGTCAAAGAAAGGAATAGGAA...CTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCGTTTCCCTCTTTACATaGGCTGCCTGTGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGVSLFT*AACELR
Trigger: CCTGAGCTCACAGGCAGCCAATGTAAAGAGGGAAAC...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp CCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAATGAAGGAGACACCCTaGTCCCACTTTGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: PLPLEMVTSSWDGLTRAEMKETP*SHFGAH
Trigger: GTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTTCAT...TTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAACAAGTCACCAGCCTTaGAGCAAGTTGTGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQETSHQP*SKLCPG
Trigger: ACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGCTAGGCGTGGGCCTCTaGCTCCATCAGGACTTGGTT +
Preference number: 5 (lower is better)
Translates to: GQKGASFSLACTYCGFLGLGVGL*LHQDLV
Trigger: AACCAAGTCCTGATGGAGCAAGAGGCCCACGCCTAG...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp CTCTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGTCGTTTGTCTTTCCCTaGATCAGAGGACAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: LFLSGCVMRWGGCTTALWSFVFP*IRGQEG
Trigger: TCCTTCTTGTCCTCTGATCAAGGGAAAGACAAACGA...CCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATTGCTGAGTGGACAGAAGCTGTGGGATATGGCTTaGGGGGAAGGTATCCAGATG +
Preference number: 5 (lower is better)
Translates to: GVGRVGGKRSLLLLSGQKLWDMA*GEGIQM
Trigger: CATCTGGATACCTTCCCCCAAAGCCATATCCCACAG...CTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTGTCTGTTGGTGGCCATaGTGGCTAAATGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPVCWWP*WLNVWL
Trigger: CAGCCAGACATTTAGCCACAATGGCCACCAACAGAC...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS GCA 90 bp CCACTCTGGCCTACAGCAAAGCAGGAGGAGGAGGTAGGGAGACTCTaGATCCACCTCCTGAGCCTAATATTTCTCCATAAGCTTACAGAA +
Preference number: 5 (lower is better)
Translates to: PLWPTAKQEEEVGRL*IHLLSLIFLHKLTE
Trigger: TTCTGTAAGCTTATGGAGAAATATTAGGCTCAGGAGGTGGATGCAGAGTCTCCCTACCTCCTCCTCCTGCTTTGCTGTAGGCCAGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460267.1
CDS-3UTR CAA 90 bp TTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTCCCAGCAGGTTGGAGTaGATGCTCATGGGCTTCATG +
Preference number: 5 (lower is better)
Translates to: LEMVTSSWDGLTRAEGALPSRLE*MLMGFM
Trigger: CATGAAGCCCATGAGCATCAACTCCAACCTGCTGGG...AAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp TCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGGCGGCTCACTTGGGATTaGAAGAGCGTGTTGACCAGC +
Preference number: 5 (lower is better)
Translates to: SSNVFLGKPLFLSGCVMRRLTWD*KSVLTS
Trigger: GCTGGTCAACACGCTCTTCAAATCCCAAGTGAGCCG...CCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp TCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGGGGCCTTGCGGCTCACTaGGGATTTGAAGAGCGTGTT +
Preference number: 5 (lower is better)
Translates to: SSNVFLGKPLFLSGCVMRGLAAH*GFEERV
Trigger: AACACGCTCTTCAAATCCCAAGTGAGCCGCAAGGCC...CCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTGGCCTTGCGGCTCACTaGGGATTTGAAGAGCGTGTT +
Preference number: 5 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRGLAAH*GFEERV
Trigger: AACACGCTCTTCAAATCCCAAGTGAGCCGCAAGGCC...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAATCCCAGCAGTTTTCATaGTTGATTTGGTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQSQQFS*LIWSPK
Trigger: CTTTGGAGACCAAATCAACAATGAAAACTGCTGGGA...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp TGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGCTCCTTGCGAACCCTTaGCTTGAATTCAGACTTCTC +
Preference number: 5 (lower is better)
Translates to: CTGRTPLHWEERSGLDKWLLANP*LEFRLL
Trigger: GAGAAGTCTGAATTCAAGCAAAGGGTTCGCAAGGAG...CCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AGGGCTGTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATATTTACTTCAAGCTCCTaGCGAACCCTTTGCTTGAAT +
Preference number: 5 (lower is better)
Translates to: RAVLAEPHSTGRRGVVWIFTSSS*RTLCLN
Trigger: ATTCAAGCAAAGGGTTCGCAAGGAGCTTGAAGTAAA...TATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTACAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTTTGTGTGTCACTTCCTaGAGGTCCTGGAGGTGGGTC +
Preference number: 5 (lower is better)
Translates to: VNSSNVFLGKPLFLSGCVLCVTS*RSWRWV
Trigger: GACCCACCTCCAGGACCTCAAGGAAGTGACACACAA...AACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GTACTGGCAGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGAGGAGAGGAGTGGTTaGGATAAATGGAGGATGCAA +
Preference number: 5 (lower is better)
Translates to: VLAEPHSTGRRGVVWINGEERSG*DKWRMQ
Trigger: TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTC...TCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCTGCCAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGATGAAGGAGACACCCTaGTCCCACTTTGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: GQKGASFSLACTYCGFLGMKETP*SHFGAH
Trigger: GTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTTCAT...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAACTTAGCGTGTACATATaGTGGGTTTCTGGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQELSVYI*WVSGGL
Trigger: CAAACCCCCAGAAACCCACAATATGTACACGCTAAG...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATTGCTGAGTGGACAGAAGACAAGTCACCAGCCTTaGAGCAAGTTGTGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: GVGRVGGKRSLLLLSGQKTSHQP*SKLCPG
Trigger: ACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT...CTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAATTGCTCCATCAGGACTaGGTTGTAGATGAATGGCCC +
Preference number: 5 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQLLHQD*VVDEWP
Trigger: GGGCCATTCATCTACAACCAAGTCCTGATGGAGCAA...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp AACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGCTAGGCGTGGGCCTCTaGCTCCATCAGGACTTGGTT +
Preference number: 5 (lower is better)
Translates to: NSSNVFLGKPLFLSGCVMLGVGL*LHQDLV
Trigger: AACCAAGTCCTGATGGAGCAAGAGGCCCACGCCTAG...CATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATTGCTGAGTGGACAGAAGGCAACGACCATGATGTaGAAGTCGAAACCGGTCTTC +
Preference number: 5 (lower is better)
Translates to: GVGRVGGKRSLLLLSGQKATTMM*KSKPVF
Trigger: GAAGACCGGTTTCGACTTCAACATCATGGTCGTTGC...CTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396417.2
CDS-3UTR CAA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAATTTACTTCAAGCTCCTaGCTGAGGTGTTTCATGAAC +
Preference number: 5 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQFTSSS*LRCFMN
Trigger: GTTCATGAAACACCTCAGCAAGGAGCTTGAAGTAAA...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396417.2
CDS-3UTR CAA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAATGACCATCCCTGGCTaGGTTGTCCCAACTGTAGTC +
Preference number: 5 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAMTIPG*VVPTVV
Trigger: GACTACAGTTGGGACAACCAAGCCAGGGATGGTCAT...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp AAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAACATTCGCGACATGAATCCTCCTTaGTCTCCGTTCCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: KGEFYKDTVCGAVAVNIRDMNPP*SPFLQG
Trigger: TCCCTGGAGGAACGGAGACAAAGGAGGATTCATGTC...GCGAATGTTGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396425.7
ENST00000396426.7
CDS-3UTR CAA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGGACATGAATCCTCCTTaGTCTCCGTTCCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: GQKGASFSLACTYCGFLGDMNPP*SPFLQG
Trigger: TCCCTGGAGGAACGGAGACAAAGGAGGATTCATGTC...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
CDS-3UTR CAA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGACATGCCCGATAGCTTaGATCTCCACTGTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: HADEWVGSNAIALRDGYKTCPIA*ISTVLG
Trigger: CCCCAAGACAGTGGAGATCAAAGCTATCGGGCATGT...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTTTCTTCCTGGCGATGTaGACCTCCTCCTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: VNSSNVFLGKPLFLSGCVFFLAM*TSSFRN
Trigger: GTTCCTGAAGGAGGAGGTCAACATCGCCAGGAAGAA...AACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGACTCCTTGCGAACCCTTaGCTTGAATTCAGACTTCTC +
Preference number: 5 (lower is better)
Translates to: TRAEGALDEFFHPADGLGLLANP*LEFRLL
Trigger: GAGAAGTCTGAATTCAAGCAAAGGGTTCGCAAGGAG...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATCCTCTTGCCATTCACTaGGTACTCCTTGTCACTTCC +
Preference number: 5 (lower is better)
Translates to: DGLTRAEGALDEFFHPADPLAIH*VLLVTS
Trigger: GGAAGTGACAAGGAGTACCAAGTGAATGGCAAGAGG...ATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTGCAAACTCACAGTGGTaGAGGTTTTCCACTTCGATG +
Preference number: 5 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPANSQW*RFSTSM
Trigger: CATCGAAGTGGAAAACCTCAACCACTGTGAGTTTGC...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGAGCAAACTCACAGTGGTaGAGGTTTTCCACTTCGATG +
Preference number: 5 (lower is better)
Translates to: TRAEGALDEFFHPADGLGANSQW*RFSTSM
Trigger: CATCGAAGTGGAAAACCTCAACCACTGTGAGTTTGC...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp ACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGGGCTAGGAAAGAGATCCCTCTTATaGCTGAGTGGACAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: TRAEGALDEFFHPADGLGKRSLL*LSGQKG
Trigger: ACCCTTCTGTCCACTCAGCAATAAGAGGGATCTCTT...TCCTAGCCCATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATACAAGTCACCAGCCTTaGAGCAAGTTGTGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: DGLTRAEGALDEFFHPADTSHQP*SKLCPG
Trigger: ACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT...ATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGAATGTCACCGTAAGATaGGCTGGGACTGGTAACATT +
Preference number: 5 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVNVTVR*AGTGNI
Trigger: AATGTTACCAGTCCCAGCCAATCTTACGGTGACATT...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp CTTCCTCAGTGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGAAATTACAGGACCAGTTaGAGTGTCTGTTTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: LPQWLRYEVGRMYNRTLGNYRTS*SVCLLV
Trigger: AACAAGCAAACAGACACTCAAACTGGTCCTGTAATT...TCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCACTGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp AAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAACATTCGCAGCATCCTGTTGGATTaGGTCAGACCTGGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: KGEFYKDTVCGAVAVNIRSILLD*VRPGFP
Trigger: AGGGAACCCAGGTCTGACCAAATCCAACAGGATGCT...GCGAATGTTGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTATGGCTTTGCCCAGCTaGTCTGGTTCTGAGGCTATC +
Preference number: 5 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRMALPS*SGSEAI
Trigger: GATAGCCTCAGAACCAGACAAGCTGGGCAAAGCCAT...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp AAGGAGACACCCTTGTCCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTGTGGTCATATCTGGTTaGGCTGTGCTTCTTGTAGCC +
Preference number: 5 (lower is better)
Translates to: KETPLSHFGAHTADLNESVVISG*AVLLVA
Trigger: GGCTACAAGAAGCACAGCCAAACCAGATATGACCAC...AGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp ATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGCTGTGCCCATCCTGCTaGTGTCCAAAGCAAGAGAAT +
Preference number: 5 (lower is better)
Translates to: MGLQGQKELLMSSFTLQMLCPSC*CPKQEN
Trigger: ATTCTCTTGCTTTGGACACAAGCAGGATGGGCACAG...CATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 90 bp TCACTTGGATTCCATATTCTCTCCTTCCCAGAGCCACAGGACCACTaGGAAAAGGGACAACCTCTGCATATGTCTAGTGTCGTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: SLGFHILSFPEPQDH*EKGQPLHMSSVVVF
Trigger: GAAAACCACGACACTAGACATATGCAGAGGTTGTCCCTTTTCCCAGTGGTCCTGTGGCTCTGGGAAGGAGAGAATATGGAATCCAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460267.1
CDS-3UTR CAA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGGATTTGAAGAGCGTGTaGACCAGCGTTGATTTGCCC +
Preference number: 5 (lower is better)
Translates to: HADEWVGSNAIALRDGYKDLKSV*TSVDLP
Trigger: GGGCAAATCAACGCTGGTCAACACGCTCTTCAAATC...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp ATGGCCCACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAATGATGTTCACAACCTaGCTGAGGTGTTTCATGAAC +
Preference number: 5 (lower is better)
Translates to: MAHKSPAFEQVVSRWRQEMMFTT*LRCFMN
Trigger: GTTCATGAAACACCTCAGCAAGGTTGTGAACATCAT...TTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGTGGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp AAGGAGACACCCTTGTCCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTTTGCGAACCCTTTGCTaGAATTCAGACTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KETPLSHFGAHTADLNESLRTLC*NSDFSS
Trigger: GGAGGAGAAGTCTGAATTCAAGCAAAGGGTTCGCAA...AGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp ATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGTTGCGAACCCTTTGCTaGAATTCAGACTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: MGLQGQKELLMSSFTLQMLRTLC*NSDFSS
Trigger: GGAGGAGAAGTCTGAATTCAAGCAAAGGGTTCGCAA...CATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp TGGCAGCAGACATATAAAATACCTTCTCCAGGGAGGCTCAGATCATGGTTCAGGCCTCTTGCCATTCACTaGGTACTCCTTGTCACTTCC +
Preference number: 5 (lower is better)
Translates to: WQQTYKIPSPGRLRSWFRPLAIH*VLLVTS
Trigger: GGAAGTGACAAGGAGTACCAAGTGAATGGCAAGAGG...CCTGAACCATGATCTGAGCCTCCCTGGAGAAGGTATTTTATATGTCTGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTCCTCTTGCCATTCACTaGGTACTCCTTGTCACTTCC +
Preference number: 5 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRPLAIH*VLLVTS
Trigger: GGAAGTGACAAGGAGTACCAAGTGAATGGCAAGAGG...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGCCTCTTGCCATTCACTaGGTACTCCTTGTCACTTCC +
Preference number: 5 (lower is better)
Translates to: HADEWVGSNAIALRDGYKPLAIH*VLLVTS
Trigger: GGAAGTGACAAGGAGTACCAAGTGAATGGCAAGAGG...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGCAAACTCACAGTGGTaGAGGTTTTCCACTTCGATG +
Preference number: 5 (lower is better)
Translates to: EMVTSSWDGLTRAEGALDANSQW*RFSTSM
Trigger: CATCGAAGTGGAAAACCTCAACCACTGTGAGTTTGC...ATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CTCTTGCTCCATCAGGACTTGGTTGTAGATGAATGGCCCACAAGTCACCAGCCTGTGAGGCAAACAGCTTaGTTTTGGGACACAAGGAAA +
Preference number: 5 (lower is better)
Translates to: LLLHQDLVVDEWPTSHQPVRQTA*FWDTRK
Trigger: TTTCCTTGTGTCCCAAAACAAAGCTGTTTGCCTCAC...AGGCTGGTGACTTGTGGGCCATTCATCTACAACCAAGTCCTGATGGAGCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp ACAAGTCACCAGCCTTTGAGCAAGTTGTGTCCAGGTGGAGACAGGAAGAGGGTGTGTCCCAATAAAAGGTaGTCTCACATGACTAGCATG +
Preference number: 5 (lower is better)
Translates to: TSHQPLSKLCPGGDRKRVCPNKR*SHMTSM
Trigger: CATGCTAGTCATGTGAGACAACCTTTTATTGGGACA...CACCCTCTTCCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTGGTGACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp TGGCTGCGTTATGAGGTGGGGAGGATGTACAACCGCACTCTGGGACAGCCACAAAAAAGAGTAACTTACTaGTACAACAAGCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: WLRYEVGRMYNRTLGQPQKRVTY*YNKQGK
Trigger: TTTCCCCTGCTTGTTGTACAAGTAAGTTACTCTTTT...TTGTGGCTGTCCCAGAGTGCGGTTGTACATCCTCCCCACCTCATAACGCAGCCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTCTTAGCGTGTACATATaGTGGGTTTCTGGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSLSVYI*WVSGGL
Trigger: CAAACCCCCAGAAACCCACAATATGTACACGCTAAG...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AAGGAGACACCCTTGTCCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTCTTAGCGTGTACATATaGTGGGTTTCTGGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: KETPLSHFGAHTADLNESLSVYI*WVSGGL
Trigger: CAAACCCCCAGAAACCCACAATATGTACACGCTAAG...AGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp ATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGCTTAGCGTGTACATATaGTGGGTTTCTGGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: MVTSSWDGLTRAEGALDELSVYI*WVSGGL
Trigger: CAAACCCCCAGAAACCCACAATATGTACACGCTAAG...CTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTAAGAGATCCCTCTTATaGCTGAGTGGACAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSKRSLL*LSGQKG
Trigger: ACCCTTCTGTCCACTCAGCAATAAGAGGGATCTCTT...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp AACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGGCCAAGTTCACGGTTTaGCCTGACTTGACTGTCCCT +
Preference number: 5 (lower is better)
Translates to: NSSNVFLGKPLFLSGCVMAKFTV*PDLTVP
Trigger: AGGGACAGTCAAGTCAGGCAAAACCGTGAACTTGGC...CATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp TGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTGTTTTCATTGTTGATTaGGTCTCCAAAGCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: WLQVAGMGLQGQKELLMSVFIVD*VSKAWG
Trigger: ACCCCAGGCTTTGGAGACCAAATCAACAATGAAAAC...ACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GGAGTAGGTAGGGTAGGTGGGAAGAGATCCCTCTTATTGCTGAGTGGACAGAAGATGATGTTCACAACCTaGCTGAGGTGTTTCATGAAC +
Preference number: 5 (lower is better)
Translates to: GVGRVGGKRSLLLLSGQKMMFTT*LRCFMN
Trigger: GTTCATGAAACACCTCAGCAAGGTTGTGAACATCAT...CTTCTGTCCACTCAGCAATAAGAGGGATCTCTTCCCACCTACCCTACCTACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCATGATGTTCACAACCTaGCTGAGGTGTTTCATGAAC +
Preference number: 5 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGMMFTT*LRCFMN
Trigger: GTTCATGAAACACCTCAGCAAGGTTGTGAACATCAT...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AGAGGAGTGGTTTGGATAAATGGAGGATGCAACTGGCCTAAAGAGGCAGCTGGCTTTACTTCAAGCTCCTaGCGAACCCTTTGCTTGAAT +
Preference number: 5 (lower is better)
Translates to: RGVVWINGGCNWPKEAAGFTSSS*RTLCLN
Trigger: ATTCAAGCAAAGGGTTCGCAAGGAGCTTGAAGTAAA...GCCAGCTGCCTCTTTAGGCCAGTTGCATCCTCCATTTATCCAAACCACTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTAGTAAGCAGAAAAATTTTGTGTGTCACTTCCTaGAGGTCCTGGAGGTGGGTC +
Preference number: 5 (lower is better)
Translates to: PTLGLTQLISMNLVSRKILCVTS*RSWRWV
Trigger: GACCCACCTCCAGGACCTCAAGGAAGTGACACACAA...AATTTTTCTGCTTACTAGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AAAGGGGAATTCTATAAAGACACAGTGTGTGGGGCAGTGGCAGTCAACATTCGCGAGGAGAGGAGTGGTTaGGATAAATGGAGGATGCAA +
Preference number: 5 (lower is better)
Translates to: KGEFYKDTVCGAVAVNIREERSG*DKWRMQ
Trigger: TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTC...GCGAATGTTGACTGCCACTGCCCCACACACTGTGTCTTTATAGAATTCCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGAAGAGATCCCTCTTATaGCTGAGTGGACAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: GQKGASFSLACTYCGFLGKRSLL*LSGQKG
Trigger: ACCCTTCTGTCCACTCAGCAATAAGAGGGATCTCTT...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp TGGCAGCAGACATATAAAATACCTTCTCCAGGGAGGCTCAGATCATGGTTCAGGCATTTAAGAAACGGGTaGTTCTTGCATCCCCTAGGC +
Preference number: 5 (lower is better)
Translates to: WQQTYKIPSPGRLRSWFRHLRNG*FLHPLG
Trigger: GCCTAGGGGATGCAAGAACAACCCGTTTCTTAAATG...CCTGAACCATGATCTGAGCCTCCCTGGAGAAGGTATTTTATATGTCTGCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp ATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATGAATGTCACCGTAAGATaGGCTGGGACTGGTAACATT +
Preference number: 5 (lower is better)
Translates to: MGLQGQKELLMSSFTLQMNVTVR*AGTGNI
Trigger: AATGTTACCAGTCCCAGCCAATCTTACGGTGACATT...CATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp GAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCAGAAGGAGCTCTTGATAATGTCACCGTAAGATaGGCTGGGACTGGTAACATT +
Preference number: 5 (lower is better)
Translates to: EMVTSSWDGLTRAEGALDNVTVR*AGTGNI
Trigger: AATGTTACCAGTCCCAGCCAATCTTACGGTGACATT...ATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp CCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTAGTAAGCAGAAAAATTTTGACCAGCGTTGATTaGCCCAGTCCACTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: PTLGLTQLISMNLVSRKILTSVD*PSPLWP
Trigger: AGGCCAGAGTGGACTGGGCAAATCAACGCTGGTCAA...AATTTTTCTGCTTACTAGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406029.5
CDS-3UTR CAA 90 bp GGACAGAAGGGTGCTAGTTTTTCCTTAGCGTGTACATATTGTGGGTTTCTGGGGGTTTTCATTGTTGATTaGGTCTCCAAAGCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GQKGASFSLACTYCGFLGVFIVD*VSKAWG
Trigger: ACCCCAGGCTTTGGAGACCAAATCAACAATGAAAAC...CCCCAGAAACCCACAATATGTACACGCTAAGGAAAAACTAGCACCCTTCTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp TCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAGGGTTTTCATTGTTGATTaGGTCTCCAAAGCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: SSNVFLGKPLFLSGCVMRVFIVD*VSKAWG
Trigger: ACCCCAGGCTTTGGAGACCAAATCAACAATGAAAAC...CCTCATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp GATGGGCTTACAAGGGCAGAAGGAGCTCTTGATGAGTTCTTTCACCCTGCAGATTCCCAGCAGTTTTCATaGTTGATTTGGTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: DGLTRAEGALDEFFHPADSQQFS*LIWSPK
Trigger: CTTTGGAGACCAAATCAACAATGAAAACTGCTGGGA...ATCTGCAGGGTGAAAGAACTCATCAAGAGCTCCTTCTGCCCTTGTAAGCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp AAGGAGACACCCTTGTCCCACTTTGGGGCTCACACAGCTGATCTCAATGAATCTATGATGTTCACAACCTaGCTGAGGTGTTTCATGAAC +
Preference number: 5 (lower is better)
Translates to: KETPLSHFGAHTADLNESMMFTT*LRCFMN
Trigger: GTTCATGAAACACCTCAGCAAGGTTGTGAACATCAT...AGATTCATTGAGATCAGCTGTGTGAGCCCCAAAGTGGGACAAGGGTGTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp ATGCCATTGCCCTTAGAGATGGTTACAAGTAGCTGGGATGGGCTTACAAGGGCATTTACTTCAAGCTCCTaGCGAACCCTTTGCTTGAAT +
Preference number: 5 (lower is better)
Translates to: MPLPLEMVTSSWDGLTRAFTSSS*RTLCLN
Trigger: ATTCAAGCAAAGGGTTCGCAAGGAGCTTGAAGTAAA...TGCCCTTGTAAGCCCATCCCAGCTACTTGTAACCATCTCTAAGGGCAATGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp CATGCAGATGAATGGGTAGGGAGCAATGCCATTGCCCTTAGAGATGGTTACAAGAGGATCCCTGTTCTGTaGAAATGTATAACCTCTGGG +
Preference number: 5 (lower is better)
Translates to: HADEWVGSNAIALRDGYKRIPVL*KCITSG
Trigger: CCCAGAGGTTATACATTTCAACAGAACAGGGATCCT...CTTGTAACCATCTCTAAGGGCAATGGCATTGCTCCCTACCCATTCATCTGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp AGAACCCCACTCCACTGGGAGGAGAGGAGTGGTTTGGATAAATGGAGGATGCAAAATTACAGGACCAGTTaGAGTGTCTGTTTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: RTPLHWEERSGLDKWRMQNYRTS*SVCLLV
Trigger: AACAAGCAAACAGACACTCAAACTGGTCCTGTAATT...TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTCCCAGTGGAGTGGGGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp AGTCAACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTAGATGGGACAGAAGGTaGTATGAGGTTATTGTAAAC +
Preference number: 5 (lower is better)
Translates to: SQLQQCLLRKTTLPQWLRRWDRR*YEVIVN
Trigger: GTTTACAATAACCTCATACAACCTTCTGTCCCATCT...ACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS-3UTR CAA 90 bp GTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAGCCTTTGAGCAAGTaGTGTCCAGGTGGAGACAGG +
Preference number: 5 (lower is better)
Translates to: VCVFSFCLFVWTEESQLQQPLSK*CPGGDR
Trigger: CCTGTCTCCACCTGGACACAACTTGCTCAAAGGCTG...CTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAAGGAGCAGGAGCAAAGTaGTGGTCCATCCAGGTCGTT +
Preference number: 5 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKGAGAK*WSIQVV
Trigger: AACGACCTGGATGGACCACAACTTTGCTCCTGCTCC...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS-3UTR CAA 90 bp AACTCCAGCAATGTCTTCTTAGGAAAACCACTCTTCCTCAGTGGCTGCGTTATGAATTACAGGACCAGTTaGAGTGTCTGTTTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: NSSNVFLGKPLFLSGCVMNYRTS*SVCLLV
Trigger: AACAAGCAAACAGACACTCAAACTGGTCCTGTAATT...CATAACGCAGCCACTGAGGAAGAGTGGTTTTCCTAAGAAGACATTGCTGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000644076.1
CDS-3UTR CAA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAACCTCTTGCCATTCACTaGGTACTCCTTGTCACTTCC +
Preference number: 5 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKPLAIH*VLLVTS
Trigger: GGAAGTGACAAGGAGTACCAAGTGAATGGCAAGAGG...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAAAGTCCACTCTGGCCTTaGGACATGAATCCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKSPLWP*DMNPPL
Trigger: CAAAGGAGGATTCATGTCCAAAGGCCAGAGTGGACT...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406029.5
CDS-3UTR CAA 90 bp GTGTGTGTGTTTAGTTTTTGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGGAGGAGAGGAGTGGTTaGGATAAATGGAGGATGCAA +
Preference number: 5 (lower is better)
Translates to: VCVFSFCLFVWTEESQLQEERSG*DKWRMQ
Trigger: TTGCATCCTCCATTTATCCAAACCACTCCTCTCCTC...CTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACAAAAACTAAACACACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAACTTAGCGTGTACATATaGTGGGTTTCTGGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKLSVYI*WVSGGL
Trigger: CAAACCCCCAGAAACCCACAATATGTACACGCTAAG...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396417.2
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS-3UTR CAA 90 bp TGTTTGTTTGTTTGGACAGAAGAAAGTCAACTCCAGCAATGTCTTCTTAGGAAATCCCAGCAGTTTTCATaGTTGATTTGGTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: CLFVWTEESQLQQCLLRKSQQFS*LIWSPK
Trigger: CTTTGGAGACCAAATCAACAATGAAAACTGCTGGGA...TTTCCTAAGAAGACATTGCTGGAGTTGACTTTCTTCTGTCCAAACAAACAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000644076.1
CDS TCA 72 bp GGACCAGTGGCAGCTGCGGGCGGCCGTGAGCGCGCGTaGGTCACGCGGGGGCTGGGGTGTTGCGCGGGTGCC +
Preference number: 6 (lower is better)
Translates to: GPVAAAGGRERA*VTRGLGCCAGA
Trigger: GGCACCCGCGCAACACCCCAGCCCCCGCGTGACTCACGCGCGCTCACGGCCGCCCGCAGCTGCCACTGGTCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449288.5
CDS CCA 72 bp CGGGCGGCCGTGAGCGCGCGTGAGTCACGCGGGGGCTaGGGTGTTGCGCGGGTGCCTGTAGAGCCGAGTCAG +
Preference number: 6 (lower is better)
Translates to: RAAVSARESRGG*GVARVPVEPSQ
Trigger: CTGACTCGGCTCTACAGGCACCCGCGCAACACCCCAGCCCCCGCGTGACTCACGCGCGCTCACGGCCGCCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449288.5
CDS CCA 72 bp GCTCAAGGAAGCCCCCAGAGCGATGCCCGTCTCCTGTaGGGGCACACTCCGGGTCCTGGCTCCAAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: AQGSPQSDARLL*GHTPGPGSKAQ
Trigger: CTGGGCCTTGGAGCCAGGACCCGGAGTGTGCCCCCACAGGAGACGGGCATCGCTCTGGGGGCTTCCTTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS GCA 72 bp CATGAATCCTCCTTTGTCTCCGTTCCTCCAGGGAGATaGTCCGGGCGCGGGGCTGCAAGGCTGAGCGGGGCG +
Preference number: 6 (lower is better)
Translates to: HESSFVSVPPGR*SGRGAARLSGA
Trigger: CGCCCCGCTCAGCCTTGCAGCCCCGCGCCCGGAGCATCTCCCTGGAGGAACGGAGACAAAGGAGGATTCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
CDS CCA 72 bp GATTTGGTCAGACCTGGGTTCCCTGGGCCCTCAGAGTaGACCCTGCCCCCTGGCACTAGGGTCACAGGTGGC +
Preference number: 6 (lower is better)
Translates to: DLVRPGFPGPSE*TLPPGTRVTGG
Trigger: GCCACCTGTGACCCTAGTGCCAGGGGGCAGGGTCCACTCTGAGGGCCCAGGGAACCCAGGTCTGACCAAATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS GCA 72 bp GGGAAGATAAGGCACACGCAGGCCCCTCACCTCCCCTaGACTCAGAGTCTGGCCATGGTGGCCAGCTTAGGG +
Preference number: 6 (lower is better)
Translates to: GKIRHTQAPHLP*TQSLAMVASLG
Trigger: CCCTAAGCTGGCCACCATGGCCAGACTCTGAGTGCAGGGGAGGTGAGGGGCCTGCGTGTGCCTTATCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 90 bp CCTGGCTCCAAGGCCCAGCCGGCTGGAGGTCTGTGGGATATGGCTTaGGGGGAAGGTATCCAGATGGATGGTCTTCCTGAGGACGGGGGT +
Preference number: 6 (lower is better)
Translates to: PGSKAQPAGGLWDMA*GEGIQMDGLPEDGG
Trigger: ACCCCCGTCCTCAGGAAGACCATCCATCTGGATACCTTCCCCCAAAGCCATATCCCACAGACCTCCAGCCGGCTGGGCCTTGGAGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 72 bp GCCATGATCCAGGCCACACCTTGTCTGACCACTCACTaGGGGATGGCCAGGCTGAGTGGGGATTGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: AMIQATPCLTTH*GMARLSGDCRQ
Trigger: CTGCCTGCAATCCCCACTCAGCCTGGCCATCCCCCAGTGAGTGGTCAGACAAGGTGTGGCCTGGATCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460267.1
CDS TCA 72 bp TCCTGGAGAAGCTCTGGTAGGCATGTGGTCAGTCACTaGGACAAGGTGCCCCTGGCCCAACGAGCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: SWRSSGRHVVSH*DKVPLAQRAWL
Trigger: GAGCCAGGCTCGTTGGGCCAGGGGCACCTTGTCTCAGTGACTGACCACATGCCTACCAGAGCTTCTCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS GCA 72 bp GCTCTGGTAGGCATGTGGTCAGTCACTGAGACAAGGTaGCCCTGGCCCAACGAGCCTGGCTCTGCAAGGACT +
Preference number: 6 (lower is better)
Translates to: ALVGMWSVTETR*PWPNEPGSART
Trigger: AGTCCTTGCAGAGCCAGGCTCGTTGGGCCAGGGGCACCTTGTCTCAGTGACTGACCACATGCCTACCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 72 bp GGTCCTGGCTCCAAGGCCCAGCCGGCTGGAGGTCTGTaGGATATGGCTTTGGGGGAAGGTATCCAGATGGAT +
Preference number: 6 (lower is better)
Translates to: GPGSKAQPAGGL*DMALGEGIQMD
Trigger: ATCCATCTGGATACCTTCCCCCAAAGCCATATCCCACAGACCTCCAGCCGGCTGGGCCTTGGAGCCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 72 bp GTAGGCATGTGGTCAGTCACTGAGACAAGGTGCCCCTaGCCCAACGAGCCTGGCTCTGCAAGGACTGGTGCA +
Preference number: 6 (lower is better)
Translates to: VGMWSVTETRCP*PNEPGSARTGA
Trigger: TGCACCAGTCCTTGCAGAGCCAGGCTCGTTGGGCCAGGGGCACCTTGTCTCAGTGACTGACCACATGCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 72 bp CTGGTCTCTGGGAGCCCTTTGGACATGAATCCTCCTTaGTCTCCGTTCCTCCAGGGAGATGCTCCGGGCGCG +
Preference number: 6 (lower is better)
Translates to: LVSGSPLDMNPP*SPFLQGDAPGA
Trigger: CGCGCCCGGAGCATCTCCCTGGAGGAACGGAGACAAAGGAGGATTCATGTCCAAAGGGCTCCCAGAGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396425.7
ENST00000396426.7
CDS CAA 72 bp CCCAGTCCACTCTGGCCTTTGGACATGAATCCTCCTTaGTCTCCGTTCCTCCAGGGAGATGCTCCGGGCGCG +
Preference number: 6 (lower is better)
Translates to: PSPLWPLDMNPP*SPFLQGDAPGA
Trigger: CGCGCCCGGAGCATCTCCCTGGAGGAACGGAGACAAAGGAGGATTCATGTCCAAAGGCCAGAGTGGACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406029.5
CDS CCA 72 bp GCTCCAAGGCCCAGCCGGCTGGAGGTCTGTGGGATATaGCTTTGGGGGAAGGTATCCAGATGGATGGTCTTC +
Preference number: 6 (lower is better)
Translates to: APRPSRLEVCGI*LWGKVSRWMVF
Trigger: GAAGACCATCCATCTGGATACCTTCCCCCAAAGCCATATCCCACAGACCTCCAGCCGGCTGGGCCTTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS TCA 72 bp GAAAGTGGGCGATCCAGGGACCGTGCCTGGCTGTTCTaGTGGAGAGTCAAGGAGATGGAGCTGAGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: ESGRSRDRAWLF*WRVKEMELSFL
Trigger: CAGGAAGCTCAGCTCCATCTCCTTGACTCTCCATCAGAACAGCCAGGCACGGTCCCTGGATCGCCCACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 72 bp GGCTTGCCTTTTCCTGGAGAAGCTCTGGTAGGCATGTaGTCAGTCACTGAGACAAGGTGCCCCTGGCCCAAC +
Preference number: 6 (lower is better)
Translates to: GLPFPGEALVGM*SVTETRCPWPN
Trigger: GTTGGGCCAGGGGCACCTTGTCTCAGTGACTGACCACATGCCTACCAGAGCTTCTCCAGGAAAAGGCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 72 bp AAGGCCCAGCCGGCTGGAGGTCTGTGGGATATGGCTTaGGGGGAAGGTATCCAGATGGATGGTCTTCCTGAG +
Preference number: 6 (lower is better)
Translates to: KAQPAGGLWDMA*GEGIQMDGLPE
Trigger: CTCAGGAAGACCATCCATCTGGATACCTTCCCCCAAAGCCATATCCCACAGACCTCCAGCCGGCTGGGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS TCA 72 bp TGTCCACGCTCACCGGAGGGAGGCCTCCATTGTCATTaGGCCGCTTGGCCCTGTAAGTCTCATAGTGGATGT +
Preference number: 6 (lower is better)
Translates to: CPRSPEGGLHCH*AAWPCKSHSGC
Trigger: ACATCCACTATGAGACTTACAGGGCCAAGCGGCTCAATGACAATGGAGGCCTCCCTCCGGTGAGCGTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS CCA 72 bp ATGACACAGAGAAGTGGTCGTCATGGGTTACTGTCGTaGCTTTCCTCTGTGTCCACGCTCACCGGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: MTQRSGRHGLLS*LSSVSTLTGGR
Trigger: CCTCCCTCCGGTGAGCGTGGACACAGAGGAAAGCCACGACAGTAACCCATGACGACCACTTCTCTGTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS CCA 72 bp TCCCTTGATCAGAGGACAAGAAGGATCCAGTGTGTCTaGGAAGATAAGGCACACGCAGGCCCCTCACCTCCC +
Preference number: 6 (lower is better)
Translates to: SLDQRTRRIQCV*EDKAHAGPSPP
Trigger: GGGAGGTGAGGGGCCTGCGTGTGCCTTATCTTCCCAGACACACTGGATCCTTCTTGTCCTCTGATCAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 72 bp CGGTTCCAGCTGGAGGCCTTGCGGCTCACTTGGGATTaGAAGAGCGTGTTGACCAGCGTTGATTTGCCCAGT +
Preference number: 6 (lower is better)
Translates to: RFQLEALRLTWD*KSVLTSVDLPS
Trigger: ACTGGGCAAATCAACGCTGGTCAACACGCTCTTCAAATCCCAAGTGAGCCGCAAGGCCTCCAGCTGGAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000449288.5
ENST00000460267.1
ENST00000644076.1
CDS CAA 90 bp GACTTGACTGTCCCTACCGAAGACAAGTCTCTGGCTGTGCCCAGCTaGATATCCAGGGCAGGGAACTCTGTGCCTGTGTCCAGTTGGGAT +
Preference number: 6 (lower is better)
Translates to: DLTVPTEDKSLAVPS*ISRAGNSVPVSSWD
Trigger: ATCCCAACTGGACACAGGCACAGAGTTCCCTGCCCTGGATATCAAGCTGGGCACAGCCAGAGACTTGTCTTCGGTAGGGACAGTCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 90 bp GCTGTGCCCGGCTTGATTGTGCCTGCTGTAGCCAAGTTCACGGTTTaGCCTGACTTGACTGTCCCTACCGAAGACAAGTCTCTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: AVPGLIVPAVAKFTV*PDLTVPTEDKSLAV
Trigger: CACAGCCAGAGACTTGTCTTCGGTAGGGACAGTCAAGTCAGGCAAAACCGTGAACTTGGCTACAGCAGGCACAATCAAGCCGGGCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 72 bp TCTATCACATGCCCGATAGCTTTGATCTCCACTGTCTaGGGGATCTTCTCCTCCCGGTTCCAGCTGGAGGCC +
Preference number: 6 (lower is better)
Translates to: SITCPIALISTV*GIFSSRFQLEA
Trigger: GGCCTCCAGCTGGAACCGGGAGGAGAAGATCCCCAAGACAGTGGAGATCAAAGCTATCGGGCATGTGATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396425.7
ENST00000396426.7
ENST00000406029.5
ENST00000449288.5
ENST00000460267.1
ENST00000644076.1
CDS CAA 90 bp CCTGGAGCTCCATGCGACTGCATCTCTGGAGGAGCAGGAGCAAAGTaGTGGTCCATCCAGGTCGTTTGTCTTTCCCTTGATCAGAGGACA +
Preference number: 6 (lower is better)
Translates to: PGAPCDCISGGAGAK*WSIQVVCLSLDQRT
Trigger: TGTCCTCTGATCAAGGGAAAGACAAACGACCTGGATGGACCACAACTTTGCTCCTGCTCCTCCAGAGATGCAGTCGCATGGAGCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 90 bp GGCTTGATTGTGCCTGCTGTAGCCAAGTTCACGGTTTTGCCTGACTaGACTGTCCCTACCGAAGACAAGTCTCTGGCTGTGCCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: GLIVPAVAKFTVLPD*TVPTEDKSLAVPSL
Trigger: CAAGCTGGGCACAGCCAGAGACTTGTCTTCGGTAGGGACAGTCAAGTCAGGCAAAACCGTGAACTTGGCTACAGCAGGCACAATCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS TCA 72 bp GTGGATACTAATGGACAGCATATTGCCTCACAGGGGTaGGGACAACCATCCCTCCCCTCGAAGGTTCTGGGT +
Preference number: 6 (lower is better)
Translates to: VDTNGQHIASQG*GQPSLPSKVLG
Trigger: ACCCAGAACCTTCGAGGGGAGGGATGGTTGTCCTCACCCCTGTGAGGCAATATGCTGTCCATTAGTATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449288.5
CDS CAA 72 bp GTGCCTGCTGTAGCCAAGTTCACGGTTTTGCCTGACTaGACTGTCCCTACCGAAGACAAGTCTCTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: VPAVAKFTVLPD*TVPTEDKSLAV
Trigger: CACAGCCAGAGACTTGTCTTCGGTAGGGACAGTCAAGTCAGGCAAAACCGTGAACTTGGCTACAGCAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 90 bp GATTGCAGGCAGGTGGGAATGGCTTCCTGCTTACTGCAGAGGGCCTaGGGGAAACATCACTTGGATTCCATATTCTCTCCTTCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: DCRQVGMASCLLQRA*GKHHLDSIFSPSQS
Trigger: GCTCTGGGAAGGAGAGAATATGGAATCCAAGTGATGTTTCCCCAAGGCCCTCTGCAGTAAGCAGGAAGCCATTCCCACCTGCCTGCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460267.1
CDS CAA 90 bp GGCTTGGTTGTCCCAACTGTAGTCAGATTCATGGCTGTGCCCGGCTaGATTGTGCCTGCTGTAGCCAAGTTCACGGTTTTGCCTGACTTG +
Preference number: 6 (lower is better)
Translates to: GLVVPTVVRFMAVPG*IVPAVAKFTVLPDL
Trigger: CAAGTCAGGCAAAACCGTGAACTTGGCTACAGCAGGCACAATCAAGCCGGGCACAGCCATGAATCTGACTACAGTTGGGACAACCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS TCA 72 bp GATTGTGCCTGCTGTAGCCAAGTTCACGGTTTTGCCTaGCTTGACTGTCCCTACCGAAGACAAGTCTCTGGC +
Preference number: 6 (lower is better)
Translates to: DCACCSQVHGFA*LDCPYRRQVSG
Trigger: GCCAGAGACTTGTCTTCGGTAGGGACAGTCAAGTCAGGCAAAACCGTGAACTTGGCTACAGCAGGCACAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS GCA 72 bp GGTCTGGGGTTACTGGCACAACTGAACCCACAGCTGTaGCCATCCTGCTTGTGTCCAAAGCAAGAGAATTCT +
Preference number: 6 (lower is better)
Translates to: GLGLLAQLNPQL*PSCLCPKQENS
Trigger: AGAATTCTCTTGCTTTGGACACAAGCAGGATGGGCACAGCTGTGGGTTCAGTTGTGCCAGTAACCCCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 72 bp GTGGGTATGTGTGATGACACAGAGAAGTGGTCGTCATaGGTTACTGTCGTGGCTTTCCTCTGTGTCCACGCT +
Preference number: 6 (lower is better)
Translates to: VGMCDDTEKWSS*VTVVAFLCVHA
Trigger: AGCGTGGACACAGAGGAAAGCCACGACAGTAACCCATGACGACCACTTCTCTGTGTCATCACACATACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS CAA 72 bp CCATGCGACTGCATCTCTGGAGGAGCAGGAGCAAAGTaGTGGTCCATCCAGGTCGTTTGTCTTTCCCTTGAT +
Preference number: 6 (lower is better)
Translates to: PCDCISGGAGAK*WSIQVVCLSLD
Trigger: ATCAAGGGAAAGACAAACGACCTGGATGGACCACAACTTTGCTCCTGCTCCTCCAGAGATGCAGTCGCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 72 bp GTCCCAACTGTAGTCAGATTCATGGCTGTGCCCGGCTaGATTGTGCCTGCTGTAGCCAAGTTCACGGTTTTG +
Preference number: 6 (lower is better)
Translates to: VPTVVRFMAVPG*IVPAVAKFTVL
Trigger: CAAAACCGTGAACTTGGCTACAGCAGGCACAATCAAGCCGGGCACAGCCATGAATCTGACTACAGTTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 90 bp AGCTTGTCTGGTTCTGAGGCTATCAAATCCATGACCATCCCTGGCTaGGTTGTCCCAACTGTAGTCAGATTCATGGCTGTGCCCGGCTTG +
Preference number: 6 (lower is better)
Translates to: SLSGSEAIKSMTIPG*VVPTVVRFMAVPGL
Trigger: CAAGCCGGGCACAGCCATGAATCTGACTACAGTTGGGACAACCAAGCCAGGGATGGTCATGGATTTGATAGCCTCAGAACCAGACAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 90 bp GTTTCCAACCTACTGGTGCCCACTGTAGCTGTGATTGTGTCCGGCTaGACTGGGTCTGATGTTGCTGAATCCATGGCTATACCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: VSNLLVPTVAVIVSG*TGSDVAESMAIPSV
Trigger: CACAGAGGGTATAGCCATGGATTCAGCAACATCAGACCCAGTCAAGCCGGACACAATCACAGCTACAGTGGGCACCAGTAGGTTGGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 90 bp ATCCTGCTTGTGTCCAAAGCAAGAGAATTCTTAGCCGTGCCCAGCTaGGCTCTGTTCACTCTGGCCAAAGCCATGGCTGTTTCCAACCTA +
Preference number: 6 (lower is better)
Translates to: ILLVSKAREFLAVPS*ALFTLAKAMAVSNL
Trigger: TAGGTTGGAAACAGCCATGGCTTTGGCCAGAGTGAACAGAGCCAAGCTGGGCACGGCTAAGAATTCTCTTGCTTTGGACACAAGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 72 bp GTACTTCTCAATGGGCTCCCAGCAACGACCATGATGTaGAAGTCGAAACCGGTCTTCATGGTCTTCTTGCGC +
Preference number: 6 (lower is better)
Translates to: VLLNGLPATTMM*KSKPVFMVFLR
Trigger: GCGCAAGAAGACCATGAAGACCGGTTTCGACTTCAACATCATGGTCGTTGCTGGGAGCCCATTGAGAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396417.2
CDS CAA 72 bp CAGGTGGGAATGGCTTCCTGCTTACTGCAGAGGGCCTaGGGGAAACATCACTTGGATTCCATATTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: QVGMASCLLQRA*GKHHLDSIFSP
Trigger: AGGAGAGAATATGGAATCCAAGTGATGTTTCCCCAAGGCCCTCTGCAGTAAGCAGGAAGCCATTCCCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460267.1
CDS CAA 72 bp GGCTTGATTGTGCCTGCTGTAGCCAAGTTCACGGTTTaGCCTGACTTGACTGTCCCTACCGAAGACAAGTCT +
Preference number: 6 (lower is better)
Translates to: GLIVPAVAKFTV*PDLTVPTEDKS
Trigger: AGACTTGTCTTCGGTAGGGACAGTCAAGTCAGGCAAAACCGTGAACTTGGCTACAGCAGGCACAATCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 72 bp GAATCCATGGCTATACCCTCTGTGGTCATATCTGGTTaGGCTGTGCTTCTTGTAGCCATGGCTTTGCCCAGC +
Preference number: 6 (lower is better)
Translates to: ESMAIPSVVISG*AVLLVAMALPS
Trigger: GCTGGGCAAAGCCATGGCTACAAGAAGCACAGCCAAACCAGATATGACCACAGAGGGTATAGCCATGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 72 bp CTACTGGTGCCCACTGTAGCTGTGATTGTGTCCGGCTaGACTGGGTCTGATGTTGCTGAATCCATGGCTATA +
Preference number: 6 (lower is better)
Translates to: LLVPTVAVIVSG*TGSDVAESMAI
Trigger: TATAGCCATGGATTCAGCAACATCAGACCCAGTCAAGCCGGACACAATCACAGCTACAGTGGGCACCAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 90 bp TGGGATGTGTTTGGTGTGGCTAAATTGATAGCCAAGCTAGGTCTGTaGGTGGCCATTGTGGCTAAATGTCTGGCTGCGTCTGTCCTTGTG +
Preference number: 6 (lower is better)
Translates to: WDVFGVAKLIAKLGL*VAIVAKCLAASVLV
Trigger: CACAAGGACAGACGCAGCCAGACATTTAGCCACAATGGCCACCAACAGACCTAGCTTGGCTATCAATTTAGCCACACCAAACACATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 90 bp ATATCTGGTTTGGCTGTGCTTCTTGTAGCCATGGCTTTGCCCAGCTaGTCTGGTTCTGAGGCTATCAAATCCATGACCATCCCTGGCTTG +
Preference number: 6 (lower is better)
Translates to: ISGLAVLLVAMALPS*SGSEAIKSMTIPGL
Trigger: CAAGCCAGGGATGGTCATGGATTTGATAGCCTCAGAACCAGACAAGCTGGGCAAAGCCATGGCTACAAGAAGCACAGCCAAACCAGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 90 bp GATGTTGCTGAATCCATGGCTATACCCTCTGTGGTCATATCTGGTTaGGCTGTGCTTCTTGTAGCCATGGCTTTGCCCAGCTTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: DVAESMAIPSVVISG*AVLLVAMALPSLSG
Trigger: ACCAGACAAGCTGGGCAAAGCCATGGCTACAAGAAGCACAGCCAAACCAGATATGACCACAGAGGGTATAGCCATGGATTCAGCAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CCA 72 bp GTGTGTGAAGTGGGTATGTGTGATGACACAGAGAAGTaGTCGTCATGGGTTACTGTCGTGGCTTTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: VCEVGMCDDTEK*SSWVTVVAFLC
Trigger: ACAGAGGAAAGCCACGACAGTAACCCATGACGACCACTTCTCTGTGTCATCACACATACCCACTTCACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396425.7
CDS CCA 72 bp AGGTGGGAATGGCTTCCTGCTTACTGCAGAGGGCCTTaGGGAAACATCACTTGGATTCCATATTCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: RWEWLPAYCRGP*GNITWIPYSLL
Trigger: AAGGAGAGAATATGGAATCCAAGTGATGTTTCCCCAAGGCCCTCTGCAGTAAGCAGGAAGCCATTCCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460267.1
CDS CAA 72 bp TTCCAGGCCCTGCTCCAGAATGATGAACCAATAACCTaGAGCCAGACAGGAACTTCTCTGAGCCTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: FQALLQNDEPIT*SQTGTSLSLSL
Trigger: CAAACTGAGGCTCAGAGAAGTTCCTGTCTGGCTCAAGGTTATTGGTTCATCATTCTGGAGCAGGGCCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449288.5
CDS CAA 72 bp CCTGTGTCCAGTTGGGATGTGTTTGGTGTGGCTAAATaGATAGCCAAGCTAGGTCTGTTGGTGGCCATTGTG +
Preference number: 6 (lower is better)
Translates to: PVSSWDVFGVAK*IAKLGLLVAIV
Trigger: CACAATGGCCACCAACAGACCTAGCTTGGCTATCAATTTAGCCACACCAAACACATCCCAACTGGACACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 72 bp GGTTCTGAGGCTATCAAATCCATGACCATCCCTGGCTaGGTTGTCCCAACTGTAGTCAGATTCATGGCTGTG +
Preference number: 6 (lower is better)
Translates to: GSEAIKSMTIPG*VVPTVVRFMAV
Trigger: CACAGCCATGAATCTGACTACAGTTGGGACAACCAAGCCAGGGATGGTCATGGATTTGATAGCCTCAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 72 bp TTGGCTGTGCTTCTTGTAGCCATGGCTTTGCCCAGCTaGTCTGGTTCTGAGGCTATCAAATCCATGACCATC +
Preference number: 6 (lower is better)
Translates to: LAVLLVAMALPS*SGSEAIKSMTI
Trigger: GATGGTCATGGATTTGATAGCCTCAGAACCAGACAAGCTGGGCAAAGCCATGGCTACAAGAAGCACAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 90 bp TCTGTGGTCATATCTGGTTTGGCTGTGCTTCTTGTAGCCATGGCTTaGCCCAGCTTGTCTGGTTCTGAGGCTATCAAATCCATGACCATC +
Preference number: 6 (lower is better)
Translates to: SVVISGLAVLLVAMA*PSLSGSEAIKSMTI
Trigger: GATGGTCATGGATTTGATAGCCTCAGAACCAGACAAGCTGGGCAAAGCCATGGCTACAAGAAGCACAGCCAAACCAGATATGACCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 72 bp TTTGGTGTGGCTAAATTGATAGCCAAGCTAGGTCTGTaGGTGGCCATTGTGGCTAAATGTCTGGCTGCGTCT +
Preference number: 6 (lower is better)
Translates to: FGVAKLIAKLGL*VAIVAKCLAAS
Trigger: AGACGCAGCCAGACATTTAGCCACAATGGCCACCAACAGACCTAGCTTGGCTATCAATTTAGCCACACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1
CDS CAA 72 bp ATATCTGGTTTGGCTGTGCTTCTTGTAGCCATGGCTTaGCCCAGCTTGTCTGGTTCTGAGGCTATCAAATCC +
Preference number: 6 (lower is better)
Translates to: ISGLAVLLVAMA*PSLSGSEAIKS
Trigger: GGATTTGATAGCCTCAGAACCAGACAAGCTGGGCAAAGCCATGGCTACAAGAAGCACAGCCAAACCAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644076.1