RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEPSECS (Homo sapiens)

Ensembl gene IDs: ENSG00000109618

Ensembl transcript IDs: ENST00000358971.7, ENST00000382103.7, ENST00000503150.1, ENST00000505513.1, ENST00000514585.5, ENST00000515272.1, ENST00000680581.1, ENST00000680824.1, ENST00000681071.1, ENST00000681166.1, ENST00000681341.1, ENST00000681374.1, ENST00000681640.1, ENST00000681948.1

Found 580 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTaGGTGACAGCTTTGTCACGGTGTTCATCTAGTGTTTTAAGTGTC +
Preference number: 1 (lower is better)
Translates to: TLAPETCLVKSIEPS*VTALSRCSSSVLSV
Trigger: GACACTTAAAACACTAGATGAACACCGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
3UTR TCA 90 bp TCTAATCTATCAGGCACCCTTGGAGCAAAACAGGATGTAGTAGAATaGATACACAGAATGCAATCAGGCCCAAGTTCCTGGACTTTAGCC +
Preference number: 1 (lower is better)
Translates to: SNLSGTLGAKQDVVE*IHRMQSGPSSWTLA
Trigger: GGCTAAAGTCCAGGAACTTGGGCCTGATTGCATTCTGTGTATTCATTCTACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR TCA 90 bp CTTGACTCTGCTTCCTTGGGGAATGCCCATTTTACAGGCACACTGTaGCTTACACATCTCAACAAACAACTAGTAACTAGTGGCCTAAGA +
Preference number: 1 (lower is better)
Translates to: LDSASLGNAHFTGTL*LTHLNKQLVTSGLR
Trigger: TCTTAGGCCACTAGTTACTAGTTGTTTGTTGAGATGTGTAAGTCACAGTGTGCCTGTAAAATGGGCATTCCCCAAGGAAGCAGAGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR TCA 90 bp TTCGTTCTTTTCTTACTGCCTTTAAACACCTGTCAAGTCTCTTTATaGACAGGTCCACATCCTGCATCTTCATTCCGATGGCTGATGCAG +
Preference number: 1 (lower is better)
Translates to: FVLFLLPLNTCQVSL*TGPHPASSFRWLMQ
Trigger: CTGCATCAGCCATCGGAATGAAGATGCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTGTTTAAAGGCAGTAAGAAAAGAACGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
3UTR CCA 90 bp AGGCGTCTACCTTACACATGTCTGACCTCATGTTTACAAACAGTCTaGGACAATGTACAACGTCACCAAAATACCAGAAAATCCCTTTCT +
Preference number: 1 (lower is better)
Translates to: RRLPYTCLTSCLQTV*DNVQRHQNTRKSLS
Trigger: AGAAAGGGATTTTCTGGTATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTAAGGTAGACGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR TCA 90 bp TATTCTACCAACTCGAGCCCCCTGCTGAATGAGATGCATACACTTTaGAGACTGCACTCCATAAGCATTATTAACTATATGTGGAATGTC +
Preference number: 1 (lower is better)
Translates to: YSTNSSPLLNEMHTL*RLHSISIINYMWNV
Trigger: GACATTCCACATATAGTTAATAATGCTTATGGAGTGCAGTCTTCAAAGTGTATGCATCTCATTCAGCAGGGGGCTCGAGTTGGTAGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR TCA 90 bp CAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTaGTACACTGCAGATGAGAAAACATTTGCTACTCTCCCAGCTCTG +
Preference number: 1 (lower is better)
Translates to: QLELLSIQQLKPKNC*YTADEKTFATLPAL
Trigger: CAGAGCTGGGAGAGTAGCAAATGTTTTCTCATCTGCAGTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR CCA 90 bp ACAGGCTCAAAACCTGCAGTGATCATGGATTTAAAGCAGGACTTCTaGTCTATTCGTGGCCATATAATATACTTTGCCTTTGGTCTTTTG +
Preference number: 1 (lower is better)
Translates to: TGSKPAVIMDLKQDF*SIRGHIIYFAFGLL
Trigger: CAAAAGACCAAAGGCAAAGTATATTATATGGCCACGAATAGACCAGAAGTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGAGCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR CCA 90 bp CAAGGATTGATGCAGTCTAAGAATGGGAAACTTAACAATCATCAATaGCTAGTTCAGACCAAAGTCTGCTCCTTGACTGAATATTCCCAT +
Preference number: 1 (lower is better)
Translates to: QGLMQSKNGKLNNHQ*LVQTKVCSLTEYSH
Trigger: ATGGGAATATTCAGTCAAGGAGCAGACTTTGGTCTGAACTAGCCATTGATGATTGTTAAGTTTCCCATTCTTAGACTGCATCAATCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR CCA 90 bp GCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATGAGGTaGTTAAAGACACAGAACCACAGTGAAGTGCTGATCATAATATTA +
Preference number: 1 (lower is better)
Translates to: AHSVAQSSITVLIMR*LKTQNHSEVLIIIL
Trigger: TAATATTATGATCAGCACTTCACTGTGGTTCTGTGTCTTTAACCACCTCATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR CCA 90 bp CAAATGATCAAGAAGAAACCCTTCGCATGTCATGAAGAAGCATCCTaGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGCCATTTCT +
Preference number: 1 (lower is better)
Translates to: QMIKKKPFACHEEAS*YVSRSTLSSFKAIS
Trigger: AGAAATGGCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGACATGCGAAGGGTTTCTTCTTGATCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
3UTR-3UTR GCA 90 bp TATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAAAGCAACCAGTGCGGATaGCACTCTCCCTTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: YSHSQFAWTQEAQPWLQKSNQCG*HSPFPF
Trigger: GAAAGGGAAGGGAGAGTGGCATCCGCACTGGTTGCT...TTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358971.7
3UTR-3UTR GCA 90 bp ATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCAAAAGGCTAGAGCCTaGAGCTTTTGGTTGCACAGC +
Preference number: 2 (lower is better)
Translates to: IATHSLHGPKRHNPGSRNQKARA*SFWLHS
Trigger: GCTGTGCAACCAAAAGCTGCAGGCTCTAGCCTTTTG...GTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR GCA 90 bp AGGCTCAAAACCTGCAGTGATCATGGATTTAAAGCAGGACTTCTGGTCTATTCGACGACGAGCAACCAGTaGGGATGCCACTCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: RLKTCSDHGFKAGLLVYSTTSNQ*GCHSPF
Trigger: GAAGGGAGAGTGGCATCCGCACTGGTTGCTCGTCGT...CGAATAGACCAGAAGTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358971.7
3UTR-3UTR GCA 90 bp AAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCCTGCAGCTTTTGGTTaGACAGCAGAAATATCACCG +
Preference number: 2 (lower is better)
Translates to: KRHNPGSRNLSGKKHRAKPAAFG*TAEISP
Trigger: CGGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGG...CTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358971.7
3UTR-3UTR CCA 90 bp ATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACTCTATCAGGCACCCTTaGAGCAAAACAGGATGTAGT +
Preference number: 2 (lower is better)
Translates to: IATHSLHGPKRHNPGSRNSIRHP*SKTGCS
Trigger: ACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGA...GTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR TCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCAGCATCGAGCCAAGCTaGGTGACAGCTTTGTCACGG +
Preference number: 2 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSSIEPS*VTALSR
Trigger: CCGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCT...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680581.1
3UTR-3UTR CCA 90 bp GGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTAGAGCCTGCAGCTTTTaGTTGCACAGCAGAAATATC +
Preference number: 2 (lower is better)
Translates to: GSRNLSGKKHRAKLSDSFRACSF*LHSRNI
Trigger: GATATTTCTGCTGTGCAACCAAAAGCTGCAGGCTCT...AAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358971.7
3UTR-3UTR GCA 90 bp AAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGAATGAATACACAGAATaGAATCAGGCCCAAGTTCCT +
Preference number: 2 (lower is better)
Translates to: KRHNPGSRNLSGKKHRAKNEYTE*NQAQVP
Trigger: AGGAACTTGGGCCTGATTGCATTCTGTGTATTCATT...CTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR TCA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTACGAATCATCCCCAGTTaGGACCCACTGCTTTTGAGT +
Preference number: 2 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLRIIPS*DPLLLS
Trigger: ACTCAAAAGCAGTGGGTCTCAACTGGGGATGATTCG...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTCGAATCATCCCCAGTTaGGACCCACTGCTTTTGAGT +
Preference number: 2 (lower is better)
Translates to: YHSLIEREFISRGPKNQTRIIPS*DPLLLS
Trigger: ACTCAAAAGCAGTGGGTCTCAACTGGGGATGATTCG...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGACGAATCATCCCCAGTTaGGACCCACTGCTTTTGAGT +
Preference number: 2 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRRIIPS*DPLLLS
Trigger: ACTCAAAAGCAGTGGGTCTCAACTGGGGATGATTCG...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR GCA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTGCTTCCTTGGGGAATaGCCATTTTACAGGCACACT +
Preference number: 2 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHCFLGE*PFYRHT
Trigger: AGTGTGCCTGTAAAATGGGCATTCCCCAAGGAAGCA...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR CAA 90 bp ACACCAGCCAGCTTTATAATGTCCAGGACCAAAGAATTGGTAATTTaGTTCAAAAGGCTAGAGCCTGCAGCTTTTGGTTGCACAGCAGAA +
Preference number: 2 (lower is better)
Translates to: TPASFIMSRTKELVI*FKRLEPAAFGCTAE
Trigger: TTCTGCTGTGCAACCAAAAGCTGCAGGCTCTAGCCTTTTGAACAAAATTACCAATTCTTTGGTCCTGGACATTATAAAGCTGGCTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR TCA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATCGAAAGTTTATACCTTaGCTCTGCTTCCTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHRKFIP*LCFLGE
Trigger: TTCCCCAAGGAAGCAGAGTCAAGGTATAAACTTTCG...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCCGAAAGTTTATACCTTaGCTCTGCTTCCTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSRKFIP*LCFLGE
Trigger: TTCCCCAAGGAAGCAGAGTCAAGGTATAAACTTTCG...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTCATGTTTGGAATCCGTaGCCCTGGTTATCACTTAAG +
Preference number: 2 (lower is better)
Translates to: YHSLIEREFISRGPKNQTHVWNP*PWLSLK
Trigger: CTTAAGTGATAACCAGGGTCACGGATTCCAAACATG...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTTATCTATTCAGCAGCTaGAGCCCAAGAACTGCTGAT +
Preference number: 2 (lower is better)
Translates to: YHSLIEREFISRGPKNQTYLFSS*SPRTAD
Trigger: ATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATA...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR GCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAAGCCAACAGGCAGGTTTaGAAAGGCAGCTCCCAAAAT +
Preference number: 2 (lower is better)
Translates to: ISLKLTILHAHIPKGQKEANRQV*KGSSQN
Trigger: ATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATGAACTACAAAGCAGTTaGCTACTGTATGGACACCAG +
Preference number: 2 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHELQSS*LLYGHQ
Trigger: CTGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTC...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358971.7
3UTR-3UTR CCA 90 bp GTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGCAAGAGGCACAACCCTaGCTCCAGAAACCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: VMKKHPGMCQEVHYLVLKQEAQP*LQKPVW
Trigger: CCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTG...CTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
3UTR-3UTR CCA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGCAAGAGGCACAACCCTaGCTCCAGAAACCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMQEAQP*LQKPVW
Trigger: CCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTG...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
3UTR-3UTR CCA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTGACTCTGCTTCCTTaGGGAATGCCCATTTTACAG +
Preference number: 2 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHLTLLP*GMPILQ
Trigger: CTGTAAAATGGGCATTCCCCAAGGAAGCAGAGTCAA...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTTTGACTCTGCTTCCTTaGGGAATGCCCATTTTACAG +
Preference number: 2 (lower is better)
Translates to: YHSLIEREFISRGPKNQTLTLLP*GMPILQ
Trigger: CTGTAAAATGGGCATTCCCCAAGGAAGCAGAGTCAA...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGAATAGCTTTGGCATGGTaGCATGTTCAGAAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRIALAW*HVQKLQ
Trigger: CTGAAGCTTCTGAACATGCCACCATGCCAAAGCTAT...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp CATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGCCGAGCCCCCTGCTGAATaGGATGCATACACTTTGAAG +
Preference number: 2 (lower is better)
Translates to: HEEASWYVSRSTLSSFKAEPPAE*DAYTLK
Trigger: CTTCAAAGTGTATGCATCTCATTCAGCAGGGGGCTC...GGCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR TCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACGCATCCCACCAGTTGTaGCAACCAAAAATGTCTGCA +
Preference number: 2 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYASHQL*QPKMSA
Trigger: TGCAGACATTTTTGGTTGTCACAACTGGTGGGATGC...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR GCA 90 bp CATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGCCCAAAAGGCTAGAGCCTaGAGCTTTTGGTTGCACAGC +
Preference number: 2 (lower is better)
Translates to: HEEASWYVSRSTLSSFKAQKARA*SFWLHS
Trigger: GCTGTGCAACCAAAAGCTGCAGGCTCTAGCCTTTTG...GGCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR CCA 90 bp GTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGCACTCACAGTTTGCATaGACCCAAGAGGCACAACCC +
Preference number: 2 (lower is better)
Translates to: VMKKHPGMCQEVHYLVLKHSQFA*TQEAQP
Trigger: GGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTG...CTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
3UTR-3UTR CCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTAACATAGCTTTGGCATaGTGGCATGTTCAGAAGCTT +
Preference number: 2 (lower is better)
Translates to: YHSLIEREFISRGPKNQTNIALA*WHVQKL
Trigger: AAGCTTCTGAACATGCCACCATGCCAAAGCTATGTT...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp AAATTCCCTTCCCTGCCATGTATAAGTAACACATTGTGTAGTGACCAAAAGAATTGGCTGATGCAGCATTaGGGTAAGCACAAGGGTAAT +
Preference number: 2 (lower is better)
Translates to: KFPSLPCISNTLCSDQKNWLMQH*GKHKGN
Trigger: ATTACCCTTGTGCTTACCTCAATGCTGCATCAGCCA...ATTCTTTTGGTCACTACACAATGTGTTACTTATACATGGCAGGGAAGGGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680581.1
3UTR-3UTR TCA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCTGTCAAGTCTCTTTATaGACAGGTCCACATCCTGCA +
Preference number: 2 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFCQVSL*TGPHPA
Trigger: TGCAGGATGTGGACCTGTTCATAAAGAGACTTGACA...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
3UTR-3UTR TCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTGAGACCCACTGCTTTTaGGTCAAAACGAAAGTTTAT +
Preference number: 2 (lower is better)
Translates to: YHSLIEREFISRGPKNQTETHCF*VKTKVY
Trigger: ATAAACTTTCGTTTTGACTCAAAAGCAGTGGGTCTC...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAACATGTTTGGAATCCGTaGCCCTGGTTATCACTTAAG +
Preference number: 2 (lower is better)
Translates to: ISLKLTILHAHIPKGQKEHVWNP*PWLSLK
Trigger: CTTAAGTGATAACCAGGGTCACGGATTCCAAACATG...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAATATCTATTCAGCAGCTaGAGCCCAAGAACTGCTGAT +
Preference number: 2 (lower is better)
Translates to: ISLKLTILHAHIPKGQKEYLFSS*SPRTAD
Trigger: ATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATA...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTCAAGTGCCTATTGGCTaGACAGAACTGTATTCAATA +
Preference number: 2 (lower is better)
Translates to: YHSLIEREFISRGPKNQTQVPIG*TELYSI
Trigger: TATTGAATACAGTTCTGTTCAGCCAATAGGCACTTG...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATAACTTTCTCCGAGTATaGGTCAGACTCACCAGAGCT +
Preference number: 2 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYNFLRV*VRLTRA
Trigger: AGCTCTGGTGAGTCTGACTCATACTCGGAGAAAGTT...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR GCA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATACATGTATAGCAAGCTaGACTGCCAGCATTTACATT +
Preference number: 2 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHTCIAS*TASIYI
Trigger: AATGTAAATGCTGGCAGTGCAGCTTGCTATACATGT...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR GCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTACATGTATAGCAAGCTaGACTGCCAGCATTTACATT +
Preference number: 2 (lower is better)
Translates to: YHSLIEREFISRGPKNQTTCIAS*TASIYI
Trigger: AATGTAAATGCTGGCAGTGCAGCTTGCTATACATGT...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp CTTCGTTCTTTTCTTACTGCCTTTAAACACCTGTCAAGTCTCTTTATGAACAGGCAGTTGGCTACTGTATaGACACCAGCCAGCTTTATA +
Preference number: 2 (lower is better)
Translates to: LRSFLTAFKHLSSLFMNRQLATV*TPASFI
Trigger: TATAAAGCTGGCTGGTGTCCATACAGTAGCCAACTG...CCTGTTCATAAAGAGACTTGACAGGTGTTTAAAGGCAGTAAGAAAAGAACGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR CCA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCATGAAGAAGCATCCTaGTATGTGTCAAGAAGTACA +
Preference number: 2 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHHEEAS*YVSRST
Trigger: TGTACTTCTTGACACATACCAGGATGCTTCTTCATG...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
3UTR-3UTR CCA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTAGATAATTCTTTGTTGTaGGAGTTGTCCCATGCATTG +
Preference number: 2 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLDNSLL*ELSHAL
Trigger: CAATGCATGGGACAACTCCCACAACAAAGAATTATC...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp TCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATACACCGAAAGTTTATACCTTaGCTCTGCTTCCTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: SIRIIIYSAAEAQELLIHRKFIP*LCFLGE
Trigger: TTCCCCAAGGAAGCAGAGTCAAGGTATAAACTTTCG...GTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTAGCATCCCACCAGTTGTaGCAACCAAAAATGTCTGCA +
Preference number: 2 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLASHQL*QPKMSA
Trigger: TGCAGACATTTTTGGTTGTCACAACTGGTGGGATGC...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATCAGCATTTATTCCCTTaGAATGAGTTACTACACCTA +
Preference number: 2 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHQHLFP*NELLHL
Trigger: TAGGTGTAGTAACTCATTTCAAGGGAATAAATGCTG...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR GCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACTGCTTCCTTGGGGAATaGCCATTTTACAGGCACACT +
Preference number: 2 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDCFLGE*PFYRHT
Trigger: AGTGTGCCTGTAAAATGGGCATTCCCCAAGGAAGCA...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR GCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTATGCTTCCTTGGGGAATaGCCATTTTACAGGCACACT +
Preference number: 2 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLCFLGE*PFYRHT
Trigger: AGTGTGCCTGTAAAATGGGCATTCCCCAAGGAAGCA...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp CATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGCCTCTATCAGGCACCCTTaGAGCAAAACAGGATGTAGT +
Preference number: 2 (lower is better)
Translates to: HEEASWYVSRSTLSSFKASIRHP*SKTGCS
Trigger: ACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGA...GGCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR CCA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTAACATAGCTTTGGCATaGTGGCATGTTCAGAAGCTT +
Preference number: 2 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCNIALA*WHVQKL
Trigger: AAGCTTCTGAACATGCCACCATGCCAAAGCTATGTT...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTGTTCTTATTATGAGGTaGTTAAAGACACAGAACCAC +
Preference number: 2 (lower is better)
Translates to: YHSLIEREFISRGPKNQTVLIMR*LKTQNH
Trigger: GTGGTTCTGTGTCTTTAACCACCTCATAATAAGAAC...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR CAA 90 bp TGCACTGCCAGCATTTACATTTGCAACAACATTTCAATCCCTTTTTaGACTCTAGAGGTTGCAACTCTTCAGCTTTATTGGTTCAGCAAT +
Preference number: 2 (lower is better)
Translates to: CTASIYICNNISIPF*TLEVATLQLYWFSN
Trigger: ATTGCTGAACCAATAAAGCTGAAGAGTTGCAACCTCTAGAGTCAAAAAAGGGATTGAAATGTTGTTGCAAATGTAAATGCTGGCAGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTACGAAAGTTTATACCTTaGCTCTGCTTCCTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLRKFIP*LCFLGE
Trigger: TTCCCCAAGGAAGCAGAGTCAAGGTATAAACTTTCG...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACTCAGACTCAGAAAAATaGGCACATGGGCAAGTAGAG +
Preference number: 2 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDSDSEK*AHGQVE
Trigger: CTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGA...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATGGACAAAGGAAAGCCTaGATAGACAGAACTCTTCAA +
Preference number: 2 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYGQRKA*IDRTLQ
Trigger: TTGAAGAGTTCTGTCTATTCAGGCTTTCCTTTGTCC...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAAAACAAAGGCCAATTATaGGGCTTACCAATCAGTACT +
Preference number: 2 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQNKGQL*GLPIST
Trigger: AGTACTGATTGGTAAGCCTCATAATTGGCCTTTGTT...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAAAACAAAGGCCAATTATaGGGCTTACCAATCAGTACT +
Preference number: 2 (lower is better)
Translates to: ISLKLTILHAHIPKGQKENKGQL*GLPIST
Trigger: AGTACTGATTGGTAAGCCTCATAATTGGCCTTTGTT...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACGACACAGAACCACAGTaGAGTGCTGATCATAATATT +
Preference number: 2 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYDTEPQ*SADHNI
Trigger: AATATTATGATCAGCACTTCACTGTGGTTCTGTGTC...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR GCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAATATAGCAAGCTGCACTaGCAGCATTTACATTTGCAA +
Preference number: 2 (lower is better)
Translates to: ISLKLTILHAHIPKGQKEYSKLH*QHLHLQ
Trigger: TTGCAAATGTAAATGCTGGCAGTGCAGCTTGCTATA...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATCTTAACAATCATCAATaGCTAGTTCAGACCAAAGTC +
Preference number: 2 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNLNNHQ*LVQTKV
Trigger: GACTTTGGTCTGAACTAGCCATTGATGATTGTTAAG...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTAGAAACGGTAAAGAATaGTTAGGAGGAAGCACTCTA +
Preference number: 2 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCRNGKE*LGGSTL
Trigger: TAGAGTGCTTCCTCCTAACCATTCTTTACCGTTTCT...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGTTGACTCTGCTTCCTTaGGGAATGCCCATTTTACAG +
Preference number: 2 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMLTLLP*GMPILQ
Trigger: CTGTAAAATGGGCATTCCCCAAGGAAGCAGAGTCAA...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATAGAAAAATGAGCACATaGGCAAGTAGAGGGGAATAC +
Preference number: 2 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYRKMST*ASRGEY
Trigger: GTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCT...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAATGTTTACAAACAGTCTaGGACAATGTACAACGTCAC +
Preference number: 2 (lower is better)
Translates to: ISLKLTILHAHIPKGQKECLQTV*DNVQRH
Trigger: GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACA...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp CTTCGTTCTTTTCTTACTGCCTTTAAACACCTGTCAAGTCTCTTTATGAACAGGCAGGATGTAGTAGAATaGATACACAGAATGCAATCA +
Preference number: 2 (lower is better)
Translates to: LRSFLTAFKHLSSLFMNRQDVVE*IHRMQS
Trigger: TGATTGCATTCTGTGTATTCATTCTACTACATCCTG...CCTGTTCATAAAGAGACTTGACAGGTGTTTAAAGGCAGTAAGAAAAGAACGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR TCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACGGAAAAATGCACCAGTaGGCACCATATAAAACAATT +
Preference number: 2 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYGKMHQ*APYKTI
Trigger: AATTGTTTTATATGGTGCTCACTGGTGCATTTTTCC...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGGGACAAAGGAAAGCCTaGATAGACAGAACTCTTCAA +
Preference number: 2 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMGQRKA*IDRTLQ
Trigger: TTGAAGAGTTCTGTCTATTCAGGCTTTCCTTTGTCC...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACGGACAAAGGAAAGCCTaGATAGACAGAACTCTTCAA +
Preference number: 2 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDGQRKA*IDRTLQ
Trigger: TTGAAGAGTTCTGTCTATTCAGGCTTTCCTTTGTCC...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATGGTTATCTTCGGCAATaGTTGGTAATGTATCATCCA +
Preference number: 2 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYGYLRQ*LVMYHP
Trigger: TGGATGATACATTACCAATCATTGCCGAAGATAACC...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATCAAGTGCCTATTGGCTaGACAGAACTGTATTCAATA +
Preference number: 2 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYQVPIG*TELYSI
Trigger: TATTGAATACAGTTCTGTTCAGCCAATAGGCACTTG...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR GCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACAAAAATGTCTGCAGATaGTGTTCAGATAAGCGAATC +
Preference number: 2 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYKNVCR*CSDKRI
Trigger: GATTCGCTTATCTGAACAGCATCTGCAGACATTTTT...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR GCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATTATAGCAAGCTGCACTaGCAGCATTTACATTTGCAA +
Preference number: 2 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYYSKLH*QHLHLQ
Trigger: TTGCAAATGTAAATGCTGGCAGTGCAGCTTGCTATA...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR GCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACCCACAGCTGATTTTCTaGATCAGGAATGAAATATTG +
Preference number: 2 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYPQLIF*IRNEIL
Trigger: CAATATTTCATTCCTGATGCAGAAAATCAGCTGTGG...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTCTTAACAATCATCAATaGCTAGTTCAGACCAAAGTC +
Preference number: 2 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCLNNHQ*LVQTKV
Trigger: GACTTTGGTCTGAACTAGCCATTGATGATTGTTAAG...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACAGAAAAATGAGCACATaGGCAAGTAGAGGGGAATAC +
Preference number: 2 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDRKMST*ASRGEY
Trigger: GTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCT...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACAACATAGCTTTGGCATaGTGGCATGTTCAGAAGCTT +
Preference number: 2 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDNIALA*WHVQKL
Trigger: AAGCTTCTGAACATGCCACCATGCCAAAGCTATGTT...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTGTTCTTATTATGAGGTaGTTAAAGACACAGAACCAC +
Preference number: 2 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCVLIMR*LKTQNH
Trigger: GTGGTTCTGTGTCTTTAACCACCTCATAATAAGAAC...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR CAA 90 bp TTCTGGTCTATTCGTGGCCATATAATATACTTTGCCTTTGGTCTTTaGTGTCGTAATGTTAAGAAACACAGAGTTAGACTCATACCAGTT +
Preference number: 2 (lower is better)
Translates to: FWSIRGHIIYFAFGL*CRNVKKHRVRLIPV
Trigger: AACTGGTATGAGTCTAACTCTGTGTTTCTTAACATTACGACACAAAAGACCAAAGGCAAAGTATATTATATGGCCACGAATAGACCAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR TCA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGTTTACAGGCACACTGTaGCTTACACATCTCAACAAA +
Preference number: 2 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLFTGTL*LTHLNK
Trigger: TTTGTTGAGATGTGTAAGTCACAGTGTGCCTGTAAA...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACTTTACAGGCACACTGTaGCTTACACATCTCAACAAA +
Preference number: 2 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDFTGTL*LTHLNK
Trigger: TTTGTTGAGATGTGTAAGTCACAGTGTGCCTGTAAA...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACGACACAGAACCACAGTaGAGTGCTGATCATAATATT +
Preference number: 2 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDDTEPQ*SADHNI
Trigger: AATATTATGATCAGCACTTCACTGTGGTTCTGTGTC...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR GCA 90 bp AAATTCCCTTCCCTGCCATGTATAAGTAACACATTGTGTAGTGACCAAAAGAATATTCTGTATATCAAGTaGCTATTGGCTGAACAGAAC +
Preference number: 2 (lower is better)
Translates to: KFPSLPCISNTLCSDQKNILYIK*LLAEQN
Trigger: GTTCTGTTCAGCCAATAGGCACTTGATATACAGAAT...ATTCTTTTGGTCACTACACAATGTGTTACTTATACATGGCAGGGAAGGGAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp CATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGCCCTTCTGGTCTATTCGTaGCCATATAATATACTTTGC +
Preference number: 2 (lower is better)
Translates to: HEEASWYVSRSTLSSFKALLVYS*PYNILC
Trigger: GCAAAGTATATTATATGGCCACGAATAGACCAGAAG...GGCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR CCA 90 bp GTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGTTAAAGCAGGACTTCTaGTCTATTCGTGGCCATATA +
Preference number: 2 (lower is better)
Translates to: VMKKHPGMCQEVHYLVLKLKQDF*SIRGHI
Trigger: TATATGGCCACGAATAGACCAGAAGTCCTGCTTTAA...CTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR CCA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGGATAATTCTTTGTTGTaGGAGTTGTCCCATGCATTG +
Preference number: 2 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLDNSLL*ELSHAL
Trigger: CAATGCATGGGACAACTCCCACAACAAAGAATTATC...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp AAATTCCCTTCCCTGCCATGTATAAGTAACACATTGTGTAGTGACCAAAAGAATATATCAAGTGCCTATTaGCTGAACAGAACTGTATTC +
Preference number: 2 (lower is better)
Translates to: KFPSLPCISNTLCSDQKNISSAY*LNRTVF
Trigger: GAATACAGTTCTGTTCAGCCAATAGGCACTTGATAT...ATTCTTTTGGTCACTACACAATGTGTTACTTATACATGGCAGGGAAGGGAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAAGTTGTTTTCAGCTGTTaGTTATTTTCCTCTGTGAAA +
Preference number: 2 (lower is better)
Translates to: ISLKLTILHAHIPKGQKEVVFSC*LFSSVK
Trigger: TTTCACAGAGGAAAATAACCAACAGCTGAAAACAAC...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACGGAAAAATGCACCAGTaGGCACCATATAAAACAATT +
Preference number: 2 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDGKMHQ*APYKTI
Trigger: AATTGTTTTATATGGTGCTCACTGGTGCATTTTTCC...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR TCA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGAATAAAAACCACAGCTaGTTTTCTGCATCAGGAATG +
Preference number: 2 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMNKNHS*FSASGM
Trigger: CATTCCTGATGCAGAAAATCAGCTGTGGTTTTTATT...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR GCA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGAAAAATGTCTGCAGATaGTGTTCAGATAAGCGAATC +
Preference number: 2 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMKNVCR*CSDKRI
Trigger: GATTCGCTTATCTGAACAGCATCTGCAGACATTTTT...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp TGGACTTTAGCCTCCACTGCTTTCAGGTCTGTACGCAGCTCGTCACCTTCCAAAGGAACTACAAAGCAGTaGGCTACTGTATGGACACCA +
Preference number: 3 (lower is better)
Translates to: WTLASTAFRSVRSSSPSKGTTKQ*ATVWTP
Trigger: TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCC...TTTGGAAGGTGACGAGCTGCGTACAGACCTGAAAGCAGTGGAGGCTAAAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR TCA 72 bp GCAGCTGAAGCCCAAGAACTGCTGATACACTGCAGATaGGAAAACATTTGCTACTCTCCCAGCTCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: AAEAQELLIHCR*ENICYSPSSGL
Trigger: AAGGCCAGAGCTGGGAGAGTAGCAAATGTTTTCTCATCTGCAGTGTATCAGCAGTTCTTGGGCTTCAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR GCA 72 bp CACCTGTCAAGTCTCTTTATGAACAGGTCCACATCCTaGATCTTCATTCCGATGGCTGATGCAGCATTGAGG +
Preference number: 3 (lower is better)
Translates to: HLSSLFMNRSTS*IFIPMADAALR
Trigger: CCTCAATGCTGCATCAGCCATCGGAATGAAGATGCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
3UTR-3UTR CAA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATATAGCCACTCACAGTTaGCATGGACCCAAGAGGCAC +
Preference number: 3 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHIATHS*HGPKRH
Trigger: GTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
3UTR TCA 72 bp TCAGGCACCCTTGGAGCAAAACAGGATGTAGTAGAATaGATACACAGAATGCAATCAGGCCCAAGTTCCTGG +
Preference number: 3 (lower is better)
Translates to: SGTLGAKQDVVE*IHRMQSGPSSW
Trigger: CCAGGAACTTGGGCCTGATTGCATTCTGTGTATTCATTCTACTACATCCTGTTTTGCTCCAAGGGTGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR TCA 72 bp CCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTaGGTGACAGCTTTGTCACGGTGTTCATCTAGTGTT +
Preference number: 3 (lower is better)
Translates to: PETCLVKSIEPS*VTALSRCSSSV
Trigger: AACACTAGATGAACACCGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
3UTR TCA 72 bp GAACAGGTCCACATCCTGCATCTTCATTCCGATGGCTaGTGCAGCATTGAGGTAAGCACAAGGGTAATTATT +
Preference number: 3 (lower is better)
Translates to: EQVHILHLHSDG*CSIEVSTRVII
Trigger: AATAATTACCCTTGTGCTTACCTCAATGCTGCATCAGCCATCGGAATGAAGATGCAGGATGTGGACCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
3UTR GCA 72 bp AACAGCATCCCACCAGTTGTGACAACCAAAAATGTCTaGAGATGCTGTTCAGATAAGCGAATCATCCCCAGT +
Preference number: 3 (lower is better)
Translates to: NSIPPVVTTKNV*RCCSDKRIIPS
Trigger: ACTGGGGATGATTCGCTTATCTGAACAGCATCTGCAGACATTTTTGGTTGTCACAACTGGTGGGATGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp GTGATCATGGATTTAAAGCAGGACTTCTGGTCTATTCGTGGCCATATAATATACGCCTGCAGCTTTTGGTaGCACAGCAGAAATATCACC +
Preference number: 3 (lower is better)
Translates to: VIMDLKQDFWSIRGHIIYACSFW*HSRNIT
Trigger: GGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGGC...GTATATTATATGGCCACGAATAGACCAGAAGTCCTGCTTTAAATCCATGATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358971.7
3UTR TCA 72 bp TTCTTACTGCCTTTAAACACCTGTCAAGTCTCTTTATaGACAGGTCCACATCCTGCATCTTCATTCCGATGG +
Preference number: 3 (lower is better)
Translates to: FLLPLNTCQVSL*TGPHPASSFRW
Trigger: CCATCGGAATGAAGATGCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTGTTTAAAGGCAGTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
3UTR TCA 72 bp GCTTCCTTGGGGAATGCCCATTTTACAGGCACACTGTaGCTTACACATCTCAACAAACAACTAGTAACTAGT +
Preference number: 3 (lower is better)
Translates to: ASLGNAHFTGTL*LTHLNKQLVTS
Trigger: ACTAGTTACTAGTTGTTTGTTGAGATGTGTAAGTCACAGTGTGCCTGTAAAATGGGCATTCCCCAAGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR GCA 72 bp GGTTATTTAGTGAAGGAATTCTTAGAGCCTTCAATATaGCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAA +
Preference number: 3 (lower is better)
Translates to: GYLVKEFLEPSI*QQAGLQRQLPK
Trigger: TTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCATATTGAAGGCTCTAAGAATTCCTTCACTAAATAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR CCA 72 bp GTCAAAACGAAAGTTTATACCTTGACTCTGCTTCCTTaGGGAATGCCCATTTTACAGGCACACTGTGACTTA +
Preference number: 3 (lower is better)
Translates to: VKTKVYTLTLLP*GMPILQAHCDL
Trigger: TAAGTCACAGTGTGCCTGTAAAATGGGCATTCCCCAAGGAAGCAGAGTCAAGGTATAAACTTTCGTTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTAATAGCCACTCACAGTTaGCATGGACCCAAGAGGCAC +
Preference number: 3 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLIATHS*HGPKRH
Trigger: GTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
3UTR-3UTR CAA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTACCAAAGTCTGCTCCTaGACTGAATATTCCCATGAA +
Preference number: 3 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNITKVCS*TEYSHE
Trigger: TTCATGGGAATATTCAGTCAAGGAGCAGACTTTGGT...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCACCAAAGTCTGCTCCTaGACTGAATATTCCCATGAA +
Preference number: 3 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSTKVCS*TEYSHE
Trigger: TTCATGGGAATATTCAGTCAAGGAGCAGACTTTGGT...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTAACCAAAGTCTGCTCCTaGACTGAATATTCCCATGAA +
Preference number: 3 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLTKVCS*TEYSHE
Trigger: TTCATGGGAATATTCAGTCAAGGAGCAGACTTTGGT...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR TCA 72 bp AACTCGAGCCCCCTGCTGAATGAGATGCATACACTTTaGAGACTGCACTCCATAAGCATTATTAACTATATG +
Preference number: 3 (lower is better)
Translates to: NSSPLLNEMHTL*RLHSISIINYM
Trigger: CATATAGTTAATAATGCTTATGGAGTGCAGTCTTCAAAGTGTATGCATCTCATTCAGCAGGGGGCTCGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR CAA 90 bp CATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGCCGGAACTACAAAGCAGTaGGCTACTGTATGGACACCA +
Preference number: 3 (lower is better)
Translates to: HEEASWYVSRSTLSSFKAGTTKQ*ATVWTP
Trigger: TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCC...GGCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR CAA 90 bp TCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATACACCAGATGAGAAAACATTaGCTACTCTCCCAGCTCTGG +
Preference number: 3 (lower is better)
Translates to: SIRIIIYSAAEAQELLIHQMRKH*LLSQLW
Trigger: CCAGAGCTGGGAGAGTAGCAAATGTTTTCTCATCTG...GTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTAGCACTAATGACATTTaGGGCTGGATAATTCTTTGT +
Preference number: 3 (lower is better)
Translates to: YHSLIEREFISRGPKNQTSTNDI*GWIILC
Trigger: ACAAAGAATTATCCAGCCCAAAATGTCATTAGTGCT...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATATTTCAATCCCTTTTTaGACTCTAGAGGTTGCAACT +
Preference number: 3 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHISIPF*TLEVAT
Trigger: AGTTGCAACCTCTAGAGTCAAAAAAGGGATTGAAAT...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR TCA 72 bp TTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTaGTACACTGCAGATGAGAAAACATTTGCTACTCTC +
Preference number: 3 (lower is better)
Translates to: LLSIQQLKPKNC*YTADEKTFATL
Trigger: GAGAGTAGCAAATGTTTTCTCATCTGCAGTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR CCA 72 bp CCTTACACATGTCTGACCTCATGTTTACAAACAGTCTaGGACAATGTACAACGTCACCAAAATACCAGAAAA +
Preference number: 3 (lower is better)
Translates to: PYTCLTSCLQTV*DNVQRHQNTRK
Trigger: TTTTCTGGTATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTAACGAAAGTTTATACCTaGACTCTGCTTCCTTGGGGA +
Preference number: 3 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLTKVYT*TLLPWG
Trigger: TCCCCAAGGAAGCAGAGTCAAGGTATAAACTTTCGT...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR TCA 72 bp GCTTGCTTGTACTACAGCCTTATCATTTCTTTCAAATaGTCAAGAAGAAACCCTTCGCATGTCATGAAGAAG +
Preference number: 3 (lower is better)
Translates to: ACLYYSLIISFK*SRRNPSHVMKK
Trigger: CTTCTTCATGACATGCGAAGGGTTTCTTCTTGATCATTTGAAAGAAATGATAAGGCTGTAGTACAAGCAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
3UTR CCA 72 bp GATCATGGATTTAAAGCAGGACTTCTGGTCTATTCGTaGCCATATAATATACTTTGCCTTTGGTCTTTTGTG +
Preference number: 3 (lower is better)
Translates to: DHGFKAGLLVYS*PYNILCLWSFV
Trigger: CACAAAAGACCAAAGGCAAAGTATATTATATGGCCACGAATAGACCAGAAGTCCTGCTTTAAATCCATGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
3UTR-3UTR CAA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAAAGCACTAATGACATTTaGGGCTGGATAATTCTTTGT +
Preference number: 3 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQSTNDI*GWIILC
Trigger: ACAAAGAATTATCCAGCCCAAAATGTCATTAGTGCT...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATAACTCTTCAGCTTTATaGGTTCAGCAATTTAGTCCC +
Preference number: 3 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYNSSAL*VQQFSP
Trigger: GGGACTAAATTGCTGAACCAATAAAGCTGAAGAGTT...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACATTTCAATCCCTTTTTaGACTCTAGAGGTTGCAACT +
Preference number: 3 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYISIPF*TLEVAT
Trigger: AGTTGCAACCTCTAGAGTCAAAAAAGGGATTGAAAT...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTTATATCAAGTGCCTATaGGCTGAACAGAACTGTATT +
Preference number: 3 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCYIKCL*AEQNCI
Trigger: AATACAGTTCTGTTCAGCCAATAGGCACTTGATATA...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR GCA 72 bp GTCTGTGCACAACATCTGAACAAACTAACCAATATATaGAGGCTGCTTAAAGCAAAAACAGTAAGTGGAATA +
Preference number: 3 (lower is better)
Translates to: VCAQHLNKLTNI*RLLKAKTVSGI
Trigger: TATTCCACTTACTGTTTTTGCTTTAAGCAGCCTGCATATATTGGTTAGTTTGTTCAGATGTTGTGCACAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR GCA 72 bp AAAACAATTTTGGCTTACATGTATAGCAAGCTGCACTaGCAGCATTTACATTTGCAACAACATTTCAATCCC +
Preference number: 3 (lower is better)
Translates to: KTILAYMYSKLH*QHLHLQQHFNP
Trigger: GGGATTGAAATGTTGTTGCAAATGTAAATGCTGGCAGTGCAGCTTGCTATACATGTAAGCCAAAATTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATAGCACTAATGACATTTaGGGCTGGATAATTCTTTGT +
Preference number: 3 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYSTNDI*GWIILC
Trigger: ACAAAGAATTATCCAGCCCAAAATGTCATTAGTGCT...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTATTTATAATGACATGTTaGGAATCCGTGACCCTGGTT +
Preference number: 3 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLFIMTC*ESVTLV
Trigger: AACCAGGGTCACGGATTCCAAACATGTCATTATAAA...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGTTTATAATGACATGTTaGGAATCCGTGACCCTGGTT +
Preference number: 3 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMFIMTC*ESVTLV
Trigger: AACCAGGGTCACGGATTCCAAACATGTCATTATAAA...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGAACTCTTCAGCTTTATaGGTTCAGCAATTTAGTCCC +
Preference number: 3 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMNSSAL*VQQFSP
Trigger: GGGACTAAATTGCTGAACCAATAAAGCTGAAGAGTT...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTATGCCAGCATTTACATTaGCAACAACATTTCAATCCC +
Preference number: 3 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLCQHLH*QQHFNP
Trigger: GGGATTGAAATGTTGTTGCAAATGTAAATGCTGGCA...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATTGTTGTTTTCAGCTGTaGGTTATTTTCCTCTGTGAA +
Preference number: 3 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYCCFQL*VIFLCE
Trigger: TTCACAGAGGAAAATAACCAACAGCTGAAAACAACA...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTAAGCACTAATGACATTTaGGGCTGGATAATTCTTTGT +
Preference number: 3 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLSTNDI*GWIILC
Trigger: ACAAAGAATTATCCAGCCCAAAATGTCATTAGTGCT...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATTTCAATCCCTTTTTaGACTCTAGAGGTTGCAACT +
Preference number: 3 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLISIPF*TLEVAT
Trigger: AGTTGCAACCTCTAGAGTCAAAAAAGGGATTGAAAT...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR-3UTR CAA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACTGTTGTTTTCAGCTGTaGGTTATTTTCCTCTGTGAA +
Preference number: 3 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDCCFQL*VIFLCE
Trigger: TTCACAGAGGAAAATAACCAACAGCTGAAAACAACA...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp CTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGCGTATGAGGTGCTCATaGGAGCGGCGGGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LTVCMDPRGTTLAPETCLRMRCS*ERRASQ
Trigger: CTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACG...CAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp AGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGACCAGAAGCAGCCGTATaGGGTGCTCATGCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: SIATHSLHGPKRHNPGSRPEAAV*GAHASG
Trigger: GCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGG...TCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp AGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAATGCAACTCGCCGCCTaGACGGTACGGCAGCGCCTT +
Preference number: 4 (lower is better)
Translates to: SIATHSLHGPKRHNPGSRMQLAA*TVRQRL
Trigger: AAGGCGCTGCCGTACCGTCCAGGCGGCGAGTTGCAT...TCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680581.1
CDS-3UTR TCA 90 bp TGGACTTTAGCCTCCACTGCTTTCAGGTCTGTACGCAGCTCGTCACCTTCCAAAAGCTCTCGCGGTTCATaGCAGCGGTGGCGACAGTGG +
Preference number: 4 (lower is better)
Translates to: WTLASTAFRSVRSSSPSKSSRGS*QRWRQW
Trigger: CCACTGTCGCCACCGCTGTCATGAACCGCGAGAGCT...TTTGGAAGGTGACGAGCTGCGTACAGACCTGAAAGCAGTGGAGGCTAAAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR GCA 90 bp CTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGACGACGAGCAACCAGTaGGGATGCCACTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LTVCMDPRGTTLAPETCLTTSNQ*GCHSPF
Trigger: GAAGGGAGAGTGGCATCCGCACTGGTTGCTCGTCGT...CAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR TCA 90 bp GGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTAGCTCTCGCGGTTCATaGCAGCGGTGGCGACAGTGG +
Preference number: 4 (lower is better)
Translates to: GSRNLSGKKHRAKLSDSFSSRGS*QRWRQW
Trigger: CCACTGTCGCCACCGCTGTCATGAACCGCGAGAGCT...AAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp CTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGAGCATCGAGCCAAGCTaGGTGACAGCTTTGTCACGG +
Preference number: 4 (lower is better)
Translates to: LTVCMDPRGTTLAPETCLSIEPS*VTALSR
Trigger: CCGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCT...CAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp AGGTCTGTACGCAGCTCGTCACCTTCCAAAACATTTTCTATCACCACAGGCTCAAGGCGGAGGCTGCAGTaGGCCGAGATCGTCACACTG +
Preference number: 4 (lower is better)
Translates to: RSVRSSSPSKTFSITTGSRRRLQ*AEIVTL
Trigger: CAGTGTGACGATCTCGGCTCACTGCAGCCTCCGCCT...TGAGCCTGTGGTGATAGAAAATGTTTTGGAAGGTGACGAGCTGCGTACAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358971.7
CDS-3UTR TCA 90 bp ATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACAGCATCGAGCCAAGCTaGGTGACAGCTTTGTCACGG +
Preference number: 4 (lower is better)
Translates to: IATHSLHGPKRHNPGSRNSIEPS*VTALSR
Trigger: CCGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCT...GTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp AGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGACAAGAGGCACAACCCTaGCTCCAGAAACCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SIATHSLHGPKRHNPGSRQEAQP*LQKPVW
Trigger: CCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTG...TCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp CCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCACTCACAGTTTGCATaGACCCAAGAGGCACAACCC +
Preference number: 4 (lower is better)
Translates to: PLTVCMDPRGTTLAPETCHSQFA*TQEAQP
Trigger: GGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTG...ACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp CACCTGTCAAGTCTCTTTATGAACAGGTCCACATCCTGCATCTTCATTCCGATGCCAGAAGCAGCCGTATaGGGTGCTCATGCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: HLSSLFMNRSTSCIFIPMPEAAV*GAHASG
Trigger: GCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGG...CATCGGAATGAAGATGCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp CCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTGAGCCCCCTGCTGAATaGGATGCATACACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: PLTVCMDPRGTTLAPETCEPPAE*DAYTLK
Trigger: CTTCAAAGTGTATGCATCTCATTCAGCAGGGGGCTC...ACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp ATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACTCGAGCCAAGCTGAGTaGCAGCTTTGTCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: IATHSLHGPKRHNPGSRNSSQAE*QLCHGV
Trigger: AACACCGTGACAAAGCTGTCACTCAGCTTGGCTCGA...GTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp CCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTTCATTCCGATGGCTaGTGCAGCATTGAGGTAAGC +
Preference number: 4 (lower is better)
Translates to: PLTVCMDPRGTTLAPETCLHSDG*CSIEVS
Trigger: GCTTACCTCAATGCTGCATCAGCCATCGGAATGAAG...ACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp GGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTATCCCAGCCATTCTCTaGACACTTGCCCGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GSRNLSGKKHRAKLSDSFIPAIL*TLARVW
Trigger: CCACACCCGGGCAAGTGTCCAGAGAATGGCTGGGAT...AAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358971.7
CDS-3UTR CCA 90 bp AGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGATCAGGCCCAAGTTCCTaGACTTTAGCCTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: SIATHSLHGPKRHNPGSRSGPSS*TLASTA
Trigger: AGCAGTGGAGGCTAAAGTCCAGGAACTTGGGCCTGA...TCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp TATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACAAGAGGCACAACCCTaGCTCCAGAAACCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: YSHSQFAWTQEAQPWLQKQEAQP*LQKPVW
Trigger: CCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTG...TTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp ATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCACTCACAGTTTGCATaGACCCAAGAGGCACAACCC +
Preference number: 4 (lower is better)
Translates to: IATHSLHGPKRHNPGSRNHSQFA*TQEAQP
Trigger: GGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTG...GTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp AGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTGTCACGCAGCGGTGGCGACAGTaGCGAATAAGCGGGAGCACT +
Preference number: 4 (lower is better)
Translates to: RNLSGKKHRAKLSDSFVTQRWRQ*RISGST
Trigger: AGTGCTCCCGCTTATTCGCCACTGTCGCCACCGCTG...CGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp TCAAAACCTGCAGTGATCATGGATTTAAAGCAGGACTTCTGGTCTATTCGTGGCAGCTCTCGCGGTTCATaGCAGCGGTGGCGACAGTGG +
Preference number: 4 (lower is better)
Translates to: SKPAVIMDLKQDFWSIRGSSRGS*QRWRQW
Trigger: CCACTGTCGCCACCGCTGTCATGAACCGCGAGAGCT...GCCACGAATAGACCAGAAGTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR TCA 90 bp GAAAGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCACTCGAGCCCCCTGCTaGATGAGATGCATACACTTT +
Preference number: 4 (lower is better)
Translates to: ESIATHSLHGPKRHNPGSTRAPC*MRCIHF
Trigger: AAAGTGTATGCATCTCATTCAGCAGGGGGCTCGAGT...GGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp AAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGTCGAGCCAAGCTGAGTaGCAGCTTTGTCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: KRHNPGSRNLSGKKHRAKSSQAE*QLCHGV
Trigger: AACACCGTGACAAAGCTGTCACTCAGCTTGGCTCGA...CTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp CTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGTGGCTGATGCAGCATTaGGGTAAGCACAAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: LTVCMDPRGTTLAPETCLWLMQH*GKHKGN
Trigger: ATTACCCTTGTGCTTACCTCAATGCTGCATCAGCCA...CAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR GCA 90 bp TCTATCACCACAGGCTCAAAACCTGCAGTGATCATGGATTTAAAGCAGGACTTCCGTATGAGGTGCTCATaGGAGCGGCGGGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: SITTGSKPAVIMDLKQDFRMRCS*ERRASQ
Trigger: CTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACG...GAAGTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGAGCCTGTGGTGATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR GCA 90 bp TCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGAACAGGTCCACATCCTaGATCTTCATTCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: SQFAWTQEAQPWLQKPVWNRSTS*IFIPMA
Trigger: AGCCATCGGAATGAAGATGCAGGATGTGGACCTGTT...CCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR GCA 90 bp CTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGAACAGGTCCACATCCTaGATCTTCATTCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: LTVCMDPRGTTLAPETCLNRSTS*IFIPMA
Trigger: AGCCATCGGAATGAAGATGCAGGATGTGGACCTGTT...CAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGAAGCTCTCGCGGTTCATaGCAGCGGTGGCGACAGTGG +
Preference number: 4 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRSSRGS*QRWRQW
Trigger: CCACTGTCGCCACCGCTGTCATGAACCGCGAGAGCT...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCCAGAAGCAGCCGTATaGGGTGCTCATGCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHPEAAV*GAHASG
Trigger: GCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGG...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCCCAGAAGCAGCCGTATaGGGTGCTCATGCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSPEAAV*GAHASG
Trigger: GCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGG...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTGTCAGCATCGAGCCAAGCTaGGTGACAGCTTTGTCACGG +
Preference number: 4 (lower is better)
Translates to: SRNLSGKKHRAKLSDSFVSIEPS*VTALSR
Trigger: CCGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCT...GACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp AGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGATGGCTGATGCAGCATTaGGGTAAGCACAAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: SIATHSLHGPKRHNPGSRWLMQH*GKHKGN
Trigger: ATTACCCTTGTGCTTACCTCAATGCTGCATCAGCCA...TCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp CCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTTGTCAAGTCTCTTTATaGACAGGTCCACATCCTGCA +
Preference number: 4 (lower is better)
Translates to: PLTVCMDPRGTTLAPETCCQVSL*TGPHPA
Trigger: TGCAGGATGTGGACCTGTTCATAAAGAGACTTGACA...ACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR GCA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTCGTATGAGGTGCTCATaGGAGCGGCGGGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNIRMRCS*ERRASQ
Trigger: CTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACG...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp AGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGACCTGCAGCTTTTGGTTaGACAGCAGAAATATCACCG +
Preference number: 4 (lower is better)
Translates to: SIATHSLHGPKRHNPGSRPAAFG*TAEISP
Trigger: CGGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGG...TCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR GCA 90 bp GAAAGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCCCTGCAGCTTTTGGTTaGACAGCAGAAATATCACCG +
Preference number: 4 (lower is better)
Translates to: ESIATHSLHGPKRHNPGSPAAFG*TAEISP
Trigger: CGGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGG...GGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR GCA 90 bp GAAAGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAACAGGTCCACATCCTaGATCTTCATTCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: ESIATHSLHGPKRHNPGSNRSTS*IFIPMA
Trigger: AGCCATCGGAATGAAGATGCAGGATGTGGACCTGTT...GGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR GCA 90 bp ATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACAACAGGTCCACATCCTaGATCTTCATTCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: IATHSLHGPKRHNPGSRNNRSTS*IFIPMA
Trigger: AGCCATCGGAATGAAGATGCAGGATGTGGACCTGTT...GTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp CTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGCAGTTGGCTACTGTATaGACACCAGCCAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: LTVCMDPRGTTLAPETCLQLATV*TPASFI
Trigger: TATAAAGCTGGCTGGTGTCCATACAGTAGCCAACTG...CAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp CTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGTCTATCAGGCACCCTTaGAGCAAAACAGGATGTAGT +
Preference number: 4 (lower is better)
Translates to: LTVCMDPRGTTLAPETCLSIRHP*SKTGCS
Trigger: ACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGA...CAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp AGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTGTCACGCAAGAGGCACAACCCTaGCTCCAGAAACCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RNLSGKKHRAKLSDSFVTQEAQP*LQKPVW
Trigger: CCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTG...CGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp AGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGTCAAGTCTCTTTATaGACAGGTCCACATCCTGCA +
Preference number: 4 (lower is better)
Translates to: RGTTLAPETCLVKSIEPSCQVSL*TGPHPA
Trigger: TGCAGGATGTGGACCTGTTCATAAAGAGACTTGACA...GCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp GAAAGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCCGAAAGTTTATACCTTaGCTCTGCTTCCTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ESIATHSLHGPKRHNPGSRKFIP*LCFLGE
Trigger: TTCCCCAAGGAAGCAGAGTCAAGGTATAAACTTTCG...GGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR TCA 90 bp GAAAGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAACAGGTTAGCAGGCTaGCATCAGCTTCATATTCTC +
Preference number: 4 (lower is better)
Translates to: ESIATHSLHGPKRHNPGSNRLAG*HQLHIL
Trigger: GAGAATATGAAGCTGATGTCAGCCTGCTAACCTGTT...GGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680581.1
CDS-3UTR TCA 90 bp AAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGGATCGTCCAATGCCATaGATGAACCTTCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KRHNPGSRNLSGKKHRAKDRPMP*MNLLQK
Trigger: CTTCTGGAGAAGGTTCATTCATGGCATTGGACGATC...CTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514585.5
CDS-3UTR GCA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCAGCAGCCGTATGAGGTaGTCATGCGAGCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFSSRMR*SCERRA
Trigger: GGCCCGCCGCTCGCATGAGCACCTCATACGGCTGCT...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp GGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTCAAAAGGCTAGAGCCTaGAGCTTTTGGTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: GSRNLSGKKHRAKLSDSFQKARA*SFWLHS
Trigger: GCTGTGCAACCAAAAGCTGCAGGCTCTAGCCTTTTG...AAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR GCA 90 bp CTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGTTAGAGCCTTCAATATaGCAACAGGCAGGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: LTVCMDPRGTTLAPETCLLEPSI*QQAGLQ
Trigger: TTGCAAACCTGCCTGTTGGCATATTGAAGGCTCTAA...CAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR GCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTACGACGGAACCAGAATaGAACTCGCCGCCTGGACGG +
Preference number: 4 (lower is better)
Translates to: YHSLIEREFISRGPKNQTTTEPE*NSPPGR
Trigger: CCGTCCAGGCGGCGAGTTGCATTCTGGTTCCGTCGT...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTACGACGGAACCAGAATaGAACTCGCCGCCTGGACGG +
Preference number: 4 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNITTEPE*NSPPGR
Trigger: CCGTCCAGGCGGCGAGTTGCATTCTGGTTCCGTCGT...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp AGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAGAGCCTGCAGCTTTTaGTTGCACAGCAGAAATATC +
Preference number: 4 (lower is better)
Translates to: SIATHSLHGPKRHNPGSRRACSF*LHSRNI
Trigger: GATATTTCTGCTGTGCAACCAAAAGCTGCAGGCTCT...TCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp GAAAGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCCAGTTGGCTACTGTATaGACACCAGCCAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: ESIATHSLHGPKRHNPGSQLATV*TPASFI
Trigger: TATAAAGCTGGCTGGTGTCCATACAGTAGCCAACTG...GGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp ATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACATAGCTTTGGCATGGTaGCATGTTCAGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: IATHSLHGPKRHNPGSRNIALAW*HVQKLQ
Trigger: CTGAAGCTTCTGAACATGCCACCATGCCAAAGCTAT...GTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CCA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTACAGCGGTGGCGACAGTaGCGAATAAGCGGGAGCACT +
Preference number: 4 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLQRWRQ*RISGST
Trigger: AGTGCTCCCGCTTATTCGCCACTGTCGCCACCGCTG...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCAGGCGGAGGCTGCAGTaGGCCGAGATCGTCACACTG +
Preference number: 4 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFRRRLQ*AEIVTL
Trigger: CAGTGTGACGATCTCGGCTCACTGCAGCCTCCGCCT...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000681948.1
CDS-3UTR TCA 90 bp ATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCACAAAAGGATGCAGTaGGTGTTAGGTCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: IATHSLHGPKRHNPGSRNHKRMQ*VLGLFT
Trigger: AGTAAACAGACCTAACACTCACTGCATCCTTTTGTG...GTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680581.1
CDS-3UTR GCA 90 bp AAGAAACCCTTCGCATGTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACAACGACGAGCAACCAGTaGGGATGCCACTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: KKPFACHEEASWYVSRSTTTSNQ*GCHSPF
Trigger: GAAGGGAGAGTGGCATCCGCACTGGTTGCTCGTCGT...TGTACTTCTTGACACATACCAGGATGCTTCTTCATGACATGCGAAGGGTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR GCA 90 bp CTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGAATGAATACACAGAATaGAATCAGGCCCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LTVCMDPRGTTLAPETCLNEYTE*NQAQVP
Trigger: AGGAACTTGGGCCTGATTGCATTCTGTGTATTCATT...CAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR GCA 90 bp AGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGATTAGAGCCTTCAATATaGCAACAGGCAGGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: SIATHSLHGPKRHNPGSRLEPSI*QQAGLQ
Trigger: TTGCAAACCTGCCTGTTGGCATATTGAAGGCTCTAA...TCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR GCA 90 bp CCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTTATAGCAAGCTGCACTaGCAGCATTTACATTTGCAA +
Preference number: 4 (lower is better)
Translates to: PLTVCMDPRGTTLAPETCYSKLH*QHLHLQ
Trigger: TTGCAAATGTAAATGCTGGCAGTGCAGCTTGCTATA...ACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680581.1
CDS-3UTR CCA 90 bp AAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCAGTTGGCTACTGTATaGACACCAGCCAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: KRHNPGSRNLSGKKHRAKQLATV*TPASFI
Trigger: TATAAAGCTGGCTGGTGTCCATACAGTAGCCAACTG...CTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp ATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAACTACAAAGCAGTTaGCTACTGTATGGACACCAG +
Preference number: 4 (lower is better)
Translates to: MDPRGTTLAPETCLVKSIELQSS*LLYGHQ
Trigger: CTGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTC...GATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp CTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGTTAAAGCAGGACTTCTaGTCTATTCGTGGCCATATA +
Preference number: 4 (lower is better)
Translates to: LTVCMDPRGTTLAPETCLLKQDF*SIRGHI
Trigger: TATATGGCCACGAATAGACCAGAAGTCCTGCTTTAA...CAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp CCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTTTAAAGCAGGACTTCTaGTCTATTCGTGGCCATATA +
Preference number: 4 (lower is better)
Translates to: PLTVCMDPRGTTLAPETCLKQDF*SIRGHI
Trigger: TATATGGCCACGAATAGACCAGAAGTCCTGCTTTAA...ACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp CTCATACCAGTTGCCATAGGAACTACAAAGCAGTTGGCTACTGTATGGACACCATCAGGCCCAAGTTCCTaGACTTTAGCCTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LIPVAIGTTKQLATVWTPSGPSS*TLASTA
Trigger: AGCAGTGGAGGCTAAAGTCCAGGAACTTGGGCCTGA...TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCCTATGGCAACTGGTATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR CCA 90 bp CACCTGTCAAGTCTCTTTATGAACAGGTCCACATCCTGCATCTTCATTCCGATGCACTCACAGTTTGCATaGACCCAAGAGGCACAACCC +
Preference number: 4 (lower is better)
Translates to: HLSSLFMNRSTSCIFIPMHSQFA*TQEAQP
Trigger: GGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTG...CATCGGAATGAAGATGCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp AGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACATAGCTTTGGCATaGTGGCATGTTCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: SIATHSLHGPKRHNPGSRNIALA*WHVQKL
Trigger: AAGCTTCTGAACATGCCACCATGCCAAAGCTATGTT...TCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CCA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTATGCAACTCGCCGCCTaGACGGTACGGCAGCGCCTT +
Preference number: 4 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCMQLAA*TVRQRL
Trigger: AAGGCGCTGCCGTACCGTCCAGGCGGCGAGTTGCAT...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATAGCTCTCGCGGTTCATaGCAGCGGTGGCGACAGTGG +
Preference number: 4 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYSSRGS*QRWRQW
Trigger: CCACTGTCGCCACCGCTGTCATGAACCGCGAGAGCT...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GATCATGGATTTAAAGCAGGACTTCTGGTCTATTCGTGGCCATATAATATACTTCCAGAAGCAGCCGTATaGGGTGCTCATGCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: DHGFKAGLLVYSWPYNILPEAAV*GAHASG
Trigger: GCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGG...AAGTATATTATATGGCCACGAATAGACCAGAAGTCCTGCTTTAAATCCATGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR TCA 90 bp CCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCAGGATGTAGTAGAATaGATACACAGAATGCAATCA +
Preference number: 4 (lower is better)
Translates to: PLTVCMDPRGTTLAPETCQDVVE*IHRMQS
Trigger: TGATTGCATTCTGTGTATTCATTCTACTACATCCTG...ACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp CTTACTGCCTTTAAACACCTGTCAAGTCTCTTTATGAACAGGTCCACATCCTGCTCGAGCCAAGCTGAGTaGCAGCTTTGTCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: LTAFKHLSSLFMNRSTSCSSQAE*QLCHGV
Trigger: AACACCGTGACAAAGCTGTCACTCAGCTTGGCTCGA...GCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTGTTTAAAGGCAGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp CACCTGTCAAGTCTCTTTATGAACAGGTCCACATCCTGCATCTTCATTCCGATGCTTCATTCCGATGGCTaGTGCAGCATTGAGGTAAGC +
Preference number: 4 (lower is better)
Translates to: HLSSLFMNRSTSCIFIPMLHSDG*CSIEVS
Trigger: GCTTACCTCAATGCTGCATCAGCCATCGGAATGAAG...CATCGGAATGAAGATGCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp GCTGGGTTTGAGAAACATAGCTTTGGCATGGTGGCATGTTCAGAAGCTTCAGTACTTCATTCCGATGGCTaGTGCAGCATTGAGGTAAGC +
Preference number: 4 (lower is better)
Translates to: AGFEKHSFGMVACSEASVLHSDG*CSIEVS
Trigger: GCTTACCTCAATGCTGCATCAGCCATCGGAATGAAG...TACTGAAGCTTCTGAACATGCCACCATGCCAAAGCTATGTTTCTCAAACCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GAAAGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCTTTACAGGCACACTGTaGCTTACACATCTCAACAAA +
Preference number: 4 (lower is better)
Translates to: ESIATHSLHGPKRHNPGSFTGTL*LTHLNK
Trigger: TTTGTTGAGATGTGTAAGTCACAGTGTGCCTGTAAA...GGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR TCA 90 bp ATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACGAGACCCACTGCTTTTaGGTCAAAACGAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: IATHSLHGPKRHNPGSRNETHCF*VKTKVY
Trigger: ATAAACTTTCGTTTTGACTCAAAAGCAGTGGGTCTC...GTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR TCA 90 bp GCTGGGTTTGAGAAACATAGCTTTGGCATGGTGGCATGTTCAGAAGCTTCAGTACGAATCATCCCCAGTTaGGACCCACTGCTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: AGFEKHSFGMVACSEASVRIIPS*DPLLLS
Trigger: ACTCAAAAGCAGTGGGTCTCAACTGGGGATGATTCG...TACTGAAGCTTCTGAACATGCCACCATGCCAAAGCTATGTTTCTCAAACCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp AGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAGACACAGAACCACAGTaGAGTGCTGATCATAATATT +
Preference number: 4 (lower is better)
Translates to: SIATHSLHGPKRHNPGSRDTEPQ*SADHNI
Trigger: AATATTATGATCAGCACTTCACTGTGGTTCTGTGTC...TCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680581.1
CDS-3UTR GCA 90 bp TATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACTCCCACACCACAATTaGCTAAGAAATTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: YSHSQFAWTQEAQPWLQKLPHHN*LRNCCC
Trigger: ACAGCAACAATTTCTTAGGCAATTGTGGTGTGGGAG...TTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR GCA 90 bp AAGAAACCCTTCGCATGTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACAAGCAACCAGTGCGGATaGCACTCTCCCTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: KKPFACHEEASWYVSRSTSNQCG*HSPFPF
Trigger: GAAAGGGAAGGGAGAGTGGCATCCGCACTGGTTGCT...TGTACTTCTTGACACATACCAGGATGCTTCTTCATGACATGCGAAGGGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR GCA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATACGACGAGCAACCAGTaGGGATGCCACTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNTTSNQ*GCHSPF
Trigger: GAAGGGAGAGTGGCATCCGCACTGGTTGCTCGTCGT...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp ATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCACAGGCTCAAAACCTaGAGTGATCATGGATTTAAA +
Preference number: 4 (lower is better)
Translates to: IATHSLHGPKRHNPGSRNHRLKT*SDHGFK
Trigger: TTTAAATCCATGATCACTGCAGGTTTTGAGCCTGTG...GTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR GCA 90 bp AGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTGTCACGTGCTTCCTTGGGGAATaGCCATTTTACAGGCACACT +
Preference number: 4 (lower is better)
Translates to: RNLSGKKHRAKLSDSFVTCFLGE*PFYRHT
Trigger: AGTGTGCCTGTAAAATGGGCATTCCCCAAGGAAGCA...CGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CCA 90 bp TCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGCTTCTGGTCTATTCGTaGCCATATAATATACTTTGC +
Preference number: 4 (lower is better)
Translates to: SQFAWTQEAQPWLQKPVWLLVYS*PYNILC
Trigger: GCAAAGTATATTATATGGCCACGAATAGACCAGAAG...CCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp GGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTTCTATCAGGCACCCTTaGAGCAAAACAGGATGTAGT +
Preference number: 4 (lower is better)
Translates to: GSRNLSGKKHRAKLSDSFSIRHP*SKTGCS
Trigger: ACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGA...AAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp AAGAAACCCTTCGCATGTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACACAAGAGGCACAACCCTaGCTCCAGAAACCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: KKPFACHEEASWYVSRSTQEAQP*LQKPVW
Trigger: CCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTG...TGTACTTCTTGACACATACCAGGATGCTTCTTCATGACATGCGAAGGGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGACAAGAGGCACAACCCTaGCTCCAGAAACCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRQEAQP*LQKPVW
Trigger: CCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTG...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp GGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTTTGACTCTGCTTCCTTaGGGAATGCCCATTTTACAG +
Preference number: 4 (lower is better)
Translates to: GSRNLSGKKHRAKLSDSFLTLLP*GMPILQ
Trigger: CTGTAAAATGGGCATTCCCCAAGGAAGCAGAGTCAA...AAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACCAGCGGTGGCGACAGTaGCGAATAAGCGGGAGCACT +
Preference number: 4 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYQRWRQ*RISGST
Trigger: AGTGCTCCCGCTTATTCGCCACTGTCGCCACCGCTG...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAAAAAGATATGGGATTGTaGGGTGTATGCAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: YSHSQFAWTQEAQPWLQKKDMGL*GVCNSL
Trigger: AAGACTGTTGCATACACCTCACAATCCCATATCTTT...TTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR TCA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTCGAGCCAAGCTGAGTaGCAGCTTTGTCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHSSQAE*QLCHGV
Trigger: AACACCGTGACAAAGCTGTCACTCAGCTTGGCTCGA...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp AGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTGTCACGCATGTTTGGAATCCGTaGCCCTGGTTATCACTTAAG +
Preference number: 4 (lower is better)
Translates to: RNLSGKKHRAKLSDSFVTHVWNP*PWLSLK
Trigger: CTTAAGTGATAACCAGGGTCACGGATTCCAAACATG...CGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR GCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACCGTATGAGGTGCTCATaGGAGCGGCGGGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDRMRCS*ERRASQ
Trigger: CTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACG...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTACATTCTCTGGACACTTaGCCTTCTCCAGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLHSLDT*PSPEAA
Trigger: GGCTGCTTCTGGAGAAGGGCAAGTGTCCAGAGAATG...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382103.7
ENST00000680581.1
CDS-3UTR CCA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTCAGGCCCAAGTTCCTaGACTTTAGCCTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNISGPSS*TLASTA
Trigger: AGCAGTGGAGGCTAAAGTCCAGGAACTTGGGCCTGA...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp AGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCCTTAACAATCATCAATaGCTAGTTCAGACCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RGTTLAPETCLVKSIEPSLNNHQ*LVQTKV
Trigger: GACTTTGGTCTGAACTAGCCATTGATGATTGTTAAG...GCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CCA 90 bp AAATTCCCTTCCCTGCCATGTATAAGTAACACATTGTGTAGTGACCAAAAGAATCAGCGGTGGCGACAGTaGCGAATAAGCGGGAGCACT +
Preference number: 4 (lower is better)
Translates to: KFPSLPCISNTLCSDQKNQRWRQ*RISGST
Trigger: AGTGCTCCCGCTTATTCGCCACTGTCGCCACCGCTG...ATTCTTTTGGTCACTACACAATGTGTTACTTATACATGGCAGGGAAGGGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACATCCCAGCCATTCTCTaGACACTTGCCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHIPAIL*TLALLQ
Trigger: CTGGAGAAGGGCAAGTGTCCAGAGAATGGCTGGGAT...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382103.7
ENST00000680581.1
CDS-3UTR TCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTGAGCCCCCTGCTGAATaGGATGCATACACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: YHSLIEREFISRGPKNQTEPPAE*DAYTLK
Trigger: CTTCAAAGTGTATGCATCTCATTCAGCAGGGGGCTC...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATACTCGAGCCCCCTGCTaGATGAGATGCATACACTTT +
Preference number: 4 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHTRAPC*MRCIHF
Trigger: AAAGTGTATGCATCTCATTCAGCAGGGGGCTCGAGT...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAAAGCATCGAGCCAAGCTaGGTGACAGCTTTGTCACGG +
Preference number: 4 (lower is better)
Translates to: ISLKLTILHAHIPKGQKESIEPS*VTALSR
Trigger: CCGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCT...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGACTTCATTCCGATGGCTaGTGCAGCATTGAGGTAAGC +
Preference number: 4 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRLHSDG*CSIEVS
Trigger: GCTTACCTCAATGCTGCATCAGCCATCGGAATGAAG...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTCTTCATTCCGATGGCTaGTGCAGCATTGAGGTAAGC +
Preference number: 4 (lower is better)
Translates to: YHSLIEREFISRGPKNQTLHSDG*CSIEVS
Trigger: GCTTACCTCAATGCTGCATCAGCCATCGGAATGAAG...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp CTCATACCAGTTGCCATAGGAACTACAAAGCAGTTGGCTACTGTATGGACACCATCAGACTCAGAAAAATaGGCACATGGGCAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LIPVAIGTTKQLATVWTPSDSEK*AHGQVE
Trigger: CTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGA...TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCCTATGGCAACTGGTATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358971.7
CDS-3UTR GCA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTAGCAACCAGTGCGGATaGCACTCTCCCTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCSNQCG*HSPFPF
Trigger: GAAAGGGAAGGGAGAGTGGCATCCGCACTGGTTGCT...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACGCCAACAGGCAGGTTTaGAAAGGCAGCTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHANRQV*KGSSQN
Trigger: ATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp AAGAAACCCTTCGCATGTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACAGCCAACAGGCAGGTTTaGAAAGGCAGCTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: KKPFACHEEASWYVSRSTANRQV*KGSSQN
Trigger: ATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC...TGTACTTCTTGACACATACCAGGATGCTTCTTCATGACATGCGAAGGGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR GCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTGCCAACAGGCAGGTTTaGAAAGGCAGCTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: YHSLIEREFISRGPKNQTANRQV*KGSSQN
Trigger: ATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp AAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGTTTGACTCTAGAGGTTaGAACTCTTCAGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: KRHNPGSRNLSGKKHRAKFDSRG*NSSALL
Trigger: CAATAAAGCTGAAGAGTTGCAACCTCTAGAGTCAAA...CTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680581.1
CDS-3UTR GCA 90 bp AAGAAACCCTTCGCATGTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACAAACACTTCTCGTTCGTaGACATGCGCAGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: KKPFACHEEASWYVSRSTNTSRS*TCADLL
Trigger: GAGAAGGTCTGCGCATGTGCACGAACGAGAAGTGTT...TGTACTTCTTGACACATACCAGGATGCTTCTTCATGACATGCGAAGGGTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680581.1
CDS-3UTR CCA 90 bp GCTGGGTTTGAGAAACATAGCTTTGGCATGGTGGCATGTTCAGAAGCTTCAGTAGAACTACAAAGCAGTTaGCTACTGTATGGACACCAG +
Preference number: 4 (lower is better)
Translates to: AGFEKHSFGMVACSEASVELQSS*LLYGHQ
Trigger: CTGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTC...TACTGAAGCTTCTGAACATGCCACCATGCCAAAGCTATGTTTCTCAAACCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp AAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTTCTGGTCTATTCGTaGCCATATAATATACTTTGC +
Preference number: 4 (lower is better)
Translates to: KRHNPGSRNLSGKKHRAKLLVYS*PYNILC
Trigger: GCAAAGTATATTATATGGCCACGAATAGACCAGAAG...CTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp GGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTTTAAAGCAGGACTTCTaGTCTATTCGTGGCCATATA +
Preference number: 4 (lower is better)
Translates to: GSRNLSGKKHRAKLSDSFLKQDF*SIRGHI
Trigger: TATATGGCCACGAATAGACCAGAAGTCCTGCTTTAA...AAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACCAAGAGGCACAACCCTaGCTCCAGAAACCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYQEAQP*LQKPVW
Trigger: CCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTG...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATGTAATCCGAGCACTTTaGAAGGCCAAGAATGGCCGA +
Preference number: 4 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHVIRAL*KAKNGR
Trigger: TCGGCCATTCTTGGCCTTCCAAAGTGCTCGGATTAC...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681948.1
CDS-3UTR CCA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTATCCCAGCCATTCTCTaGACACTTGCCGCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNIIPAIL*TLAACN
Trigger: ATTACAGGCGGCAAGTGTCCAGAGAATGGCTGGGAT...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681948.1
CDS-3UTR TCA 90 bp TCTATCACCACAGGCTCAAAACCTGCAGTGATCATGGATTTAAAGCAGGACTTCTGTCAAGTCTCTTTATaGACAGGTCCACATCCTGCA +
Preference number: 4 (lower is better)
Translates to: SITTGSKPAVIMDLKQDFCQVSL*TGPHPA
Trigger: TGCAGGATGTGGACCTGTTCATAAAGAGACTTGACA...GAAGTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGAGCCTGTGGTGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR TCA 90 bp TCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTGTCTTTACAGGCACACTGTaGCTTACACATCTCAACAAA +
Preference number: 4 (lower is better)
Translates to: SRNLSGKKHRAKLSDSFVFTGTL*LTHLNK
Trigger: TTTGTTGAGATGTGTAAGTCACAGTGTGCCTGTAAA...GACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR TCA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATCGAATCATCCCCAGTTaGGACCCACTGCTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNRIIPS*DPLLLS
Trigger: ACTCAAAAGCAGTGGGTCTCAACTGGGGATGATTCG...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACGCATCCCACCAGTTGTaGCAACCAAAAATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHASHQL*QPKMSA
Trigger: TGCAGACATTTTTGGTTGTCACAACTGGTGGGATGC...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp CCCTTCGCATGTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTGCATCCCACCAGTTGTaGCAACCAAAAATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PFACHEEASWYVSRSTLSASHQL*QPKMSA
Trigger: TGCAGACATTTTTGGTTGTCACAACTGGTGGGATGC...AGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGACATGCGAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR GCA 90 bp AAATTCCCTTCCCTGCCATGTATAAGTAACACATTGTGTAGTGACCAAAAGAATAGCAACCAGTGCGGATaGCACTCTCCCTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: KFPSLPCISNTLCSDQKNSNQCG*HSPFPF
Trigger: GAAAGGGAAGGGAGAGTGGCATCCGCACTGGTTGCT...ATTCTTTTGGTCACTACACAATGTGTTACTTATACATGGCAGGGAAGGGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACACGACGAGCAACCAGTaGGGATGCCACTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDTTSNQ*GCHSPF
Trigger: GAAGGGAGAGTGGCATCCGCACTGGTTGCTCGTCGT...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGACCTGCAGCTTTTGGTTaGACAGCAGAAATATCACCG +
Preference number: 4 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRPAAFG*TAEISP
Trigger: CGGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGG...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCCATTCTCTGGACACTTaGCCTTCTCCAGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFHSLDT*PSPEAA
Trigger: GGCTGCTTCTGGAGAAGGGCAAGTGTCCAGAGAATG...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382103.7
ENST00000680581.1
CDS-3UTR CCA 90 bp CTTACTGCCTTTAAACACCTGTCAAGTCTCTTTATGAACAGGTCCACATCCTGCAGAGCCTGCAGCTTTTaGTTGCACAGCAGAAATATC +
Preference number: 4 (lower is better)
Translates to: LTAFKHLSSLFMNRSTSCRACSF*LHSRNI
Trigger: GATATTTCTGCTGTGCAACCAAAAGCTGCAGGCTCT...GCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTGTTTAAAGGCAGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAATCAGGCCCAAGTTCCTaGACTTTAGCCTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: ISLKLTILHAHIPKGQKESGPSS*TLASTA
Trigger: AGCAGTGGAGGCTAAAGTCCAGGAACTTGGGCCTGA...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTCACTCACAGTTTGCATaGACCCAAGAGGCACAACCC +
Preference number: 4 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCHSQFA*TQEAQP
Trigger: GGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTG...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTGTCCATGAAGAAGCATCCTaGTATGTGTCAAGAAGTACA +
Preference number: 4 (lower is better)
Translates to: SRNLSGKKHRAKLSDSFVHEEAS*YVSRST
Trigger: TGTACTTCTTGACACATACCAGGATGCTTCTTCATG...GACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
3UTR CAA 72 bp AGACTCATACCAGTTGCCATAGGAACTACAAAGCAGTaGGCTACTGTATGGACACCAGCCAGCTTTATAATG +
Preference number: 4 (lower is better)
Translates to: RLIPVAIGTTKQ*ATVWTPASFIM
Trigger: CATTATAAAGCTGGCTGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCCTATGGCAACTGGTATGAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR TCA 90 bp AGGTCTGTACGCAGCTCGTCACCTTCCAAAACATTTTCTATCACCACAGGCTCACAGGATGTAGTAGAATaGATACACAGAATGCAATCA +
Preference number: 4 (lower is better)
Translates to: RSVRSSSPSKTFSITTGSQDVVE*IHRMQS
Trigger: TGATTGCATTCTGTGTATTCATTCTACTACATCCTG...TGAGCCTGTGGTGATAGAAAATGTTTTGGAAGGTGACGAGCTGCGTACAGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR TCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATTCGAGCCAAGCTGAGTaGCAGCTTTGTCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYSSQAE*QLCHGV
Trigger: AACACCGTGACAAAGCTGTCACTCAGCTTGGCTCGA...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGAGCATCGAGCCAAGCTaGGTGACAGCTTTGTCACGG +
Preference number: 4 (lower is better)
Translates to: VMKKHPGMCQEVHYLVLKSIEPS*VTALSR
Trigger: CCGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCT...CTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTAAGCATCGAGCCAAGCTaGGTGACAGCTTTGTCACGG +
Preference number: 4 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLSIEPS*VTALSR
Trigger: CCGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCT...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCTGTCAAGTCTCTTTATaGACAGGTCCACATCCTGCA +
Preference number: 4 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSCQVSL*TGPHPA
Trigger: TGCAGGATGTGGACCTGTTCATAAAGAGACTTGACA...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GCTGGGTTTGAGAAACATAGCTTTGGCATGGTGGCATGTTCAGAAGCTTCAGTAGAGACCCACTGCTTTTaGGTCAAAACGAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: AGFEKHSFGMVACSEASVETHCF*VKTKVY
Trigger: ATAAACTTTCGTTTTGACTCAAAAGCAGTGGGTCTC...TACTGAAGCTTCTGAACATGCCACCATGCCAAAGCTATGTTTCTCAAACCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTGTCGGAAAAATGCACCAGTaGGCACCATATAAAACAATT +
Preference number: 4 (lower is better)
Translates to: SRNLSGKKHRAKLSDSFVGKMHQ*APYKTI
Trigger: AATTGTTTTATATGGTGCTCACTGGTGCATTTTTCC...GACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR TCA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTCAGACTCAGAAAAATaGGCACATGGGCAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHSDSEK*AHGQVE
Trigger: CTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGA...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GCTGGGTTTGAGAAACATAGCTTTGGCATGGTGGCATGTTCAGAAGCTTCAGTAACCAAACTGCGAGTTTaGTTTAAAATTCCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: AGFEKHSFGMVACSEASVTKLRV*FKIPFP
Trigger: AGGGAAGGGAATTTTAAATCAAACTCGCAGTTTGGT...TACTGAAGCTTCTGAACATGCCACCATGCCAAAGCTATGTTTCTCAAACCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GCTGGGTTTGAGAAACATAGCTTTGGCATGGTGGCATGTTCAGAAGCTTCAGTAGACACAGAACCACAGTaGAGTGCTGATCATAATATT +
Preference number: 4 (lower is better)
Translates to: AGFEKHSFGMVACSEASVDTEPQ*SADHNI
Trigger: AATATTATGATCAGCACTTCACTGTGGTTCTGTGTC...TACTGAAGCTTCTGAACATGCCACCATGCCAAAGCTATGTTTCTCAAACCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTAACAGGTTAGCAGGCTaGCATCAGCTTCATATTCTC +
Preference number: 4 (lower is better)
Translates to: YHSLIEREFISRGPKNQTNRLAG*HQLHIL
Trigger: GAGAATATGAAGCTGATGTCAGCCTGCTAACCTGTT...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp GTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGAGCAACCAGTGCGGATaGCACTCTCCCTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: VMKKHPGMCQEVHYLVLKSNQCG*HSPFPF
Trigger: GAAAGGGAAGGGAGAGTGGCATCCGCACTGGTTGCT...CTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR GCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACCAAAAGGCTAGAGCCTaGAGCTTTTGGTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYQKARA*SFWLHS
Trigger: GCTGTGCAACCAAAAGCTGCAGGCTCTAGCCTTTTG...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCCAAAAGGCTAGAGCCTaGAGCTTTTGGTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFQKARA*SFWLHS
Trigger: GCTGTGCAACCAAAAGCTGCAGGCTCTAGCCTTTTG...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCGCCAACAGGCAGGTTTaGAAAGGCAGCTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFANRQV*KGSSQN
Trigger: ATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGAAGAGCCTGCAGCTTTTaGTTGCACAGCAGAAATATC +
Preference number: 4 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRRACSF*LHSRNI
Trigger: GATATTTCTGCTGTGCAACCAAAAGCTGCAGGCTCT...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATACACTCAGGCCCAAGTTCCTaGACTTTAGCCTCCACTGCT +
Preference number: 4 (lower is better)
Translates to: SIRIIIYSAAEAQELLIHSGPSS*TLASTA
Trigger: AGCAGTGGAGGCTAAAGTCCAGGAACTTGGGCCTGA...GTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTATCTATCAGGCACCCTTaGAGCAAAACAGGATGTAGT +
Preference number: 4 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLSIRHP*SKTGCS
Trigger: ACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGA...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATACACCACTCACAGTTTGCATaGACCCAAGAGGCACAACCC +
Preference number: 4 (lower is better)
Translates to: SIRIIIYSAAEAQELLIHHSQFA*TQEAQP
Trigger: GGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTG...GTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp CTCATACCAGTTGCCATAGGAACTACAAAGCAGTTGGCTACTGTATGGACACCACATGAAGAAGCATCCTaGTATGTGTCAAGAAGTACA +
Preference number: 4 (lower is better)
Translates to: LIPVAIGTTKQLATVWTPHEEAS*YVSRST
Trigger: TGTACTTCTTGACACATACCAGGATGCTTCTTCATG...TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCCTATGGCAACTGGTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR CCA 90 bp CTCATACCAGTTGCCATAGGAACTACAAAGCAGTTGGCTACTGTATGGACACCAGATAATTCTTTGTTGTaGGAGTTGTCCCATGCATTG +
Preference number: 4 (lower is better)
Translates to: LIPVAIGTTKQLATVWTPDNSLL*ELSHAL
Trigger: CAATGCATGGGACAACTCCCACAACAAAGAATTATC...TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCCTATGGCAACTGGTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358971.7
CDS-3UTR CCA 90 bp AGGCTCAAAACCTGCAGTGATCATGGATTTAAAGCAGGACTTCTGGTCTATTCGAGAAAAATGAGCACATaGGCAAGTAGAGGGGAATAC +
Preference number: 4 (lower is better)
Translates to: RLKTCSDHGFKAGLLVYSRKMST*ASRGEY
Trigger: GTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCT...CGAATAGACCAGAAGTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358971.7
CDS-3UTR CCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCATAGCTTTGGCATGGTaGCATGTTCAGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSIALAW*HVQKLQ
Trigger: CTGAAGCTTCTGAACATGCCACCATGCCAAAGCTAT...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACATAGCTTTGGCATGGTaGCATGTTCAGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHIALAW*HVQKLQ
Trigger: CTGAAGCTTCTGAACATGCCACCATGCCAAAGCTAT...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp AAATTCCCTTCCCTGCCATGTATAAGTAACACATTGTGTAGTGACCAAAAGAATATCCCAGCCATTCTCTaGACACTTGCCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KFPSLPCISNTLCSDQKNIPAIL*TLALLQ
Trigger: CTGGAGAAGGGCAAGTGTCCAGAGAATGGCTGGGAT...ATTCTTTTGGTCACTACACAATGTGTTACTTATACATGGCAGGGAAGGGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382103.7
ENST00000680581.1
3UTR CAA 72 bp ACACCAGCCAGCTTTATAATGTCCAGGACCAAAGAATaGGTAATTTTGTTCAAAAGGCTAGAGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TPASFIMSRTKE*VILFKRLEPAA
Trigger: AGCTGCAGGCTCTAGCCTTTTGAACAAAATTACCAATTCTTTGGTCCTGGACATTATAAAGCTGGCTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR TCA 90 bp CTCATACCAGTTGCCATAGGAACTACAAAGCAGTTGGCTACTGTATGGACACCACAGGATGTAGTAGAATaGATACACAGAATGCAATCA +
Preference number: 4 (lower is better)
Translates to: LIPVAIGTTKQLATVWTPQDVVE*IHRMQS
Trigger: TGATTGCATTCTGTGTATTCATTCTACTACATCCTG...TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCCTATGGCAACTGGTATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR TCA 90 bp CACCTGTCAAGTCTCTTTATGAACAGGTCCACATCCTGCATCTTCATTCCGATGCAGGATGTAGTAGAATaGATACACAGAATGCAATCA +
Preference number: 4 (lower is better)
Translates to: HLSSLFMNRSTSCIFIPMQDVVE*IHRMQS
Trigger: TGATTGCATTCTGTGTATTCATTCTACTACATCCTG...CATCGGAATGAAGATGCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATGAGCCCCCTGCTGAATaGGATGCATACACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYEPPAE*DAYTLK
Trigger: CTTCAAAGTGTATGCATCTCATTCAGCAGGGGGCTC...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp CATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGCCACTCGAGCCCCCTGCTaGATGAGATGCATACACTTT +
Preference number: 4 (lower is better)
Translates to: HEEASWYVSRSTLSSFKATRAPC*MRCIHF
Trigger: AAAGTGTATGCATCTCATTCAGCAGGGGGCTCGAGT...GGCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACTCGAGCCAAGCTGAGTaGCAGCTTTGTCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDSSQAE*QLCHGV
Trigger: AACACCGTGACAAAGCTGTCACTCAGCTTGGCTCGA...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAATGGCTGATGCAGCATTaGGGTAAGCACAAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: ISLKLTILHAHIPKGQKEWLMQH*GKHKGN
Trigger: ATTACCCTTGTGCTTACCTCAATGCTGCATCAGCCA...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTTGGCTGATGCAGCATTaGGGTAAGCACAAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCWLMQH*GKHKGN
Trigger: ATTACCCTTGTGCTTACCTCAATGCTGCATCAGCCA...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATCGAAAGTTTATACCTTaGCTCTGCTTCCTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNRKFIP*LCFLGE
Trigger: TTCCCCAAGGAAGCAGAGTCAAGGTATAAACTTTCG...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATCGAATCATCCCCAGTTaGGACCCACTGCTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYRIIPS*DPLLLS
Trigger: ACTCAAAAGCAGTGGGTCTCAACTGGGGATGATTCG...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GTGATCATGGATTTAAAGCAGGACTTCTGGTCTATTCGTGGCCATATAATATACGCATCCCACCAGTTGTaGCAACCAAAAATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: VIMDLKQDFWSIRGHIIYASHQL*QPKMSA
Trigger: TGCAGACATTTTTGGTTGTCACAACTGGTGGGATGC...GTATATTATATGGCCACGAATAGACCAGAAGTCCTGCTTTAAATCCATGATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358971.7
CDS-3UTR TCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAAGCATCCCACCAGTTGTaGCAACCAAAAATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ISLKLTILHAHIPKGQKEASHQL*QPKMSA
Trigger: TGCAGACATTTTTGGTTGTCACAACTGGTGGGATGC...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp CTCATACCAGTTGCCATAGGAACTACAAAGCAGTTGGCTACTGTATGGACACCAGGAAAAATGCACCAGTaGGCACCATATAAAACAATT +
Preference number: 4 (lower is better)
Translates to: LIPVAIGTTKQLATVWTPGKMHQ*APYKTI
Trigger: AATTGTTTTATATGGTGCTCACTGGTGCATTTTTCC...TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCCTATGGCAACTGGTATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358971.7
CDS-3UTR TCA 90 bp AAGAAACCCTTCGCATGTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATCTCAAAATAGTCATTaGCTTCCAAGGTGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: KKPFACHEEASWYVSRSTSQNSH*LPRWSS
Trigger: GCTTGACCACCTTGGAAGTCAATGACTATTTTGAGA...TGTACTTCTTGACACATACCAGGATGCTTCTTCATGACATGCGAAGGGTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680581.1
CDS-3UTR TCA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACTCTCAAAATAGTCATTaGCTTCCAAGGTGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHSQNSH*LPRWSS
Trigger: GCTTGACCACCTTGGAAGTCAATGACTATTTTGAGA...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATTATCTATTCAGCAGCTaGAGCCCAAGAACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNYLFSS*SPRTAD
Trigger: ATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATA...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGAGGACAAAGGAAAGCCTaGATAGACAGAACTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRGQRKA*IDRTLQ
Trigger: TTGAAGAGTTCTGTCTATTCAGGCTTTCCTTTGTCC...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp CCCTTCGCATGTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTGGACAAAGGAAAGCCTaGATAGACAGAACTCTTCAA +
Preference number: 4 (lower is better)
Translates to: PFACHEEASWYVSRSTLSGQRKA*IDRTLQ
Trigger: TTGAAGAGTTCTGTCTATTCAGGCTTTCCTTTGTCC...AGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGACATGCGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680581.1
CDS-3UTR GCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCCTCCCACACCACAATTaGCTAAGAAATTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSLPHHN*LRNCCC
Trigger: ACAGCAACAATTTCTTAGGCAATTGTGGTGTGGGAG...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAACCTGCAGCTTTTGGTTaGACAGCAGAAATATCACCG +
Preference number: 4 (lower is better)
Translates to: ISLKLTILHAHIPKGQKEPAAFG*TAEISP
Trigger: CGGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGG...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp TCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATACACCAAAAGGCTAGAGCCTaGAGCTTTTGGTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: SIRIIIYSAAEAQELLIHQKARA*SFWLHS
Trigger: GCTGTGCAACCAAAAGCTGCAGGCTCTAGCCTTTTG...GTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp TCTATCACCACAGGCTCAAAACCTGCAGTGATCATGGATTTAAAGCAGGACTTCCACAGGCTCAAAACCTaGAGTGATCATGGATTTAAA +
Preference number: 4 (lower is better)
Translates to: SITTGSKPAVIMDLKQDFHRLKT*SDHGFK
Trigger: TTTAAATCCATGATCACTGCAGGTTTTGAGCCTGTG...GAAGTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGAGCCTGTGGTGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR GCA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACTTAGAGCCTTCAATATaGCAACAGGCAGGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHLEPSI*QQAGLQ
Trigger: TTGCAAACCTGCCTGTTGGCATATTGAAGGCTCTAA...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp GCTGGGTTTGAGAAACATAGCTTTGGCATGGTGGCATGTTCAGAAGCTTCAGTAATTCTGTATATCAAGTaGCTATTGGCTGAACAGAAC +
Preference number: 4 (lower is better)
Translates to: AGFEKHSFGMVACSEASVILYIK*LLAEQN
Trigger: GTTCTGTTCAGCCAATAGGCACTTGATATACAGAAT...TACTGAAGCTTCTGAACATGCCACCATGCCAAAGCTATGTTTCTCAAACCCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTAACTTACCATCTTACATaGGCACATACCAAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLTYHLT*AHTKRA
Trigger: TGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGT...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCACTTACCATCTTACATaGGCACATACCAAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSTYHLT*AHTKRA
Trigger: TGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGT...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp CTTCTGGTCTATTCGTGGCCATATAATATACTTTGCCTTTGGTCTTTTGTGTCGGAACTACAAAGCAGTTaGCTACTGTATGGACACCAG +
Preference number: 4 (lower is better)
Translates to: LLVYSWPYNILCLWSFVSELQSS*LLYGHQ
Trigger: CTGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTC...CGACACAAAAGACCAAAGGCAAAGTATATTATATGGCCACGAATAGACCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR CCA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATGAACTACAAAGCAGTTaGCTACTGTATGGACACCAG +
Preference number: 4 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNELQSS*LLYGHQ
Trigger: CTGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTC...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATTCTATCAGGCACCCTTaGAGCAAAACAGGATGTAGT +
Preference number: 4 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNSIRHP*SKTGCS
Trigger: ACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGA...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCAGCTTCATATTCTCATaGCTAAAATCCCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSSFIFS*LKSPTV
Trigger: AACCGTGGGGGATTTTAGCCATGAGAATATGAAGCT...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp GTGACAGCTTTGTCACGGTGTTCATCTAGTGTTTTAAGTGTCATAGCTTTCTTTCCTATCAGGCACCCTTaGAGCAAAACAGGATGTAGT +
Preference number: 4 (lower is better)
Translates to: VTALSRCSSSVLSVIAFFPIRHP*SKTGCS
Trigger: ACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGG...AAAGAAAGCTATGACACTTAAAACACTAGATGAACACCGTGACAAAGCTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503150.1
CDS-3UTR TCA 90 bp GTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGGAGCCCCCTGCTGAATaGGATGCATACACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: VMKKHPGMCQEVHYLVLKEPPAE*DAYTLK
Trigger: CTTCAAAGTGTATGCATCTCATTCAGCAGGGGGCTC...CTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGACTCGAGCCCCCTGCTaGATGAGATGCATACACTTT +
Preference number: 4 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMTRAPC*MRCIHF
Trigger: AAAGTGTATGCATCTCATTCAGCAGGGGGCTCGAGT...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGCTTCATTCCGATGGCTaGTGCAGCATTGAGGTAAGC +
Preference number: 4 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMLHSDG*CSIEVS
Trigger: GCTTACCTCAATGCTGCATCAGCCATCGGAATGAAG...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAATGTCAAGTCTCTTTATaGACAGGTCCACATCCTGCA +
Preference number: 4 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQCQVSL*TGPHPA
Trigger: TGCAGGATGTGGACCTGTTCATAAAGAGACTTGACA...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGATTTACAGGCACACTGTaGCTTACACATCTCAACAAA +
Preference number: 4 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRFTGTL*LTHLNK
Trigger: TTTGTTGAGATGTGTAAGTCACAGTGTGCCTGTAAA...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACGAGACCCACTGCTTTTaGGTCAAAACGAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHETHCF*VKTKVY
Trigger: ATAAACTTTCGTTTTGACTCAAAAGCAGTGGGTCTC...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACCGAATCATCCCCAGTTaGGACCCACTGCTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDRIIPS*DPLLLS
Trigger: ACTCAAAAGCAGTGGGTCTCAACTGGGGATGATTCG...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp CTTCGTTCTTTTCTTACTGCCTTTAAACACCTGTCAAGTCTCTTTATGAACAGGCATGTTTGGAATCCGTaGCCCTGGTTATCACTTAAG +
Preference number: 4 (lower is better)
Translates to: LRSFLTAFKHLSSLFMNRHVWNP*PWLSLK
Trigger: CTTAAGTGATAACCAGGGTCACGGATTCCAAACATG...CCTGTTCATAAAGAGACTTGACAGGTGTTTAAAGGCAGTAAGAAAAGAACGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR TCA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCCATGTTTGGAATCCGTaGCCCTGGTTATCACTTAAG +
Preference number: 4 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFHVWNP*PWLSLK
Trigger: CTTAAGTGATAACCAGGGTCACGGATTCCAAACATG...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAATCAGACTCAGAAAAATaGGCACATGGGCAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQSDSEK*AHGQVE
Trigger: CTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGA...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATGGACAAAGGAAAGCCTaGATAGACAGAACTCTTCAA +
Preference number: 4 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNGQRKA*IDRTLQ
Trigger: TTGAAGAGTTCTGTCTATTCAGGCTTTCCTTTGTCC...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTAACAAAGGCCAATTATaGGGCTTACCAATCAGTACT +
Preference number: 4 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNINKGQL*GLPIST
Trigger: AGTACTGATTGGTAAGCCTCATAATTGGCCTTTGTT...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATAACAAAGGCCAATTATaGGGCTTACCAATCAGTACT +
Preference number: 4 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHNKGQL*GLPIST
Trigger: AGTACTGATTGGTAAGCCTCATAATTGGCCTTTGTT...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTGGTTATCTTCGGCAATaGTTGGTAATGTATCATCCA +
Preference number: 4 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNIGYLRQ*LVMYHP
Trigger: TGGATGATACATTACCAATCATTGCCGAAGATAACC...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTGGTTATCTTCGGCAATaGTTGGTAATGTATCATCCA +
Preference number: 4 (lower is better)
Translates to: YHSLIEREFISRGPKNQTGYLRQ*LVMYHP
Trigger: TGGATGATACATTACCAATCATTGCCGAAGATAACC...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAAAACAGGTTAGCAGGCTaGCATCAGCTTCATATTCTC +
Preference number: 4 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQNRLAG*HQLHIL
Trigger: GAGAATATGAAGCTGATGTCAGCCTGCTAACCTGTT...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp CATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGCCCCTGCAGCTTTTGGTTaGACAGCAGAAATATCACCG +
Preference number: 4 (lower is better)
Translates to: HEEASWYVSRSTLSSFKAPAAFG*TAEISP
Trigger: CGGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGG...GGCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR GCA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTACACAGGCTCAAAACCTaGAGTGATCATGGATTTAAA +
Preference number: 4 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLHRLKT*SDHGFK
Trigger: TTTAAATCCATGATCACTGCAGGTTTTGAGCCTGTG...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp AAATTCCCTTCCCTGCCATGTATAAGTAACACATTGTGTAGTGACCAAAAGAATAACAGGTCCACATCCTaGATCTTCATTCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: KFPSLPCISNTLCSDQKNNRSTS*IFIPMA
Trigger: AGCCATCGGAATGAAGATGCAGGATGTGGACCTGTT...ATTCTTTTGGTCACTACACAATGTGTTACTTATACATGGCAGGGAAGGGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATTGCTTCCTTGGGGAATaGCCATTTTACAGGCACACT +
Preference number: 4 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYCFLGE*PFYRHT
Trigger: AGTGTGCCTGTAAAATGGGCATTCCCCAAGGAAGCA...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTATAGCAAGCTGCACTaGCAGCATTTACATTTGCAA +
Preference number: 4 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNIYSKLH*QHLHLQ
Trigger: TTGCAAATGTAAATGCTGGCAGTGCAGCTTGCTATA...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCACATGTATAGCAAGCTaGACTGCCAGCATTTACATT +
Preference number: 4 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSTCIAS*TASIYI
Trigger: AATGTAAATGCTGGCAGTGCAGCTTGCTATACATGT...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACCAGTTGGCTACTGTATaGACACCAGCCAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYQLATV*TPASFI
Trigger: TATAAAGCTGGCTGGTGTCCATACAGTAGCCAACTG...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCGAACTACAAAGCAGTTaGCTACTGTATGGACACCAG +
Preference number: 4 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFELQSS*LLYGHQ
Trigger: CTGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTC...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTAAAGCAGGACTTCTaGTCTATTCGTGGCCATATA +
Preference number: 4 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHLKQDF*SIRGHI
Trigger: TATATGGCCACGAATAGACCAGAAGTCCTGCTTTAA...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACTCTATCAGGCACCCTTaGAGCAAAACAGGATGTAGT +
Preference number: 4 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYSIRHP*SKTGCS
Trigger: ACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGA...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCGATAATTCTTTGTTGTaGGAGTTGTCCCATGCATTG +
Preference number: 4 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSDNSLL*ELSHAL
Trigger: CAATGCATGGGACAACTCCCACAACAAAGAATTATC...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTGTTTACAAACAGTCTaGGACAATGTACAACGTCAC +
Preference number: 4 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNICLQTV*DNVQRH
Trigger: GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACA...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACTGTTTACAAACAGTCTaGGACAATGTACAACGTCAC +
Preference number: 4 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHCLQTV*DNVQRH
Trigger: GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACA...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGATGTTTACAAACAGTCTaGGACAATGTACAACGTCAC +
Preference number: 4 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRCLQTV*DNVQRH
Trigger: GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACA...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTAATCATTTAAGGGTCTaGCAGAGGTTAGTACATCTC +
Preference number: 4 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNINHLRV*QRLVHL
Trigger: GAGATGTACTAACCTCTGCCAGACCCTTAAATGATT...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTACAGGATGTAGTAGAATaGATACACAGAATGCAATCA +
Preference number: 4 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLQDVVE*IHRMQS
Trigger: TGATTGCATTCTGTGTATTCATTCTACTACATCCTG...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATAAAGATATGGGATTGTaGGGTGTATGCAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNKDMGL*GVCNSL
Trigger: AAGACTGTTGCATACACCTCACAATCCCATATCTTT...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000681948.1
CDS-3UTR TCA 90 bp GTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGTGGCTGATGCAGCATTaGGGTAAGCACAAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: VMKKHPGMCQEVHYLVLKWLMQH*GKHKGN
Trigger: ATTACCCTTGTGCTTACCTCAATGCTGCATCAGCCA...CTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR TCA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGTGGCTGATGCAGCATTaGGGTAAGCACAAGGGTAAT +
Preference number: 4 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMWLMQH*GKHKGN
Trigger: ATTACCCTTGTGCTTACCTCAATGCTGCATCAGCCA...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCGGAAAAATGCACCAGTaGGCACCATATAAAACAATT +
Preference number: 4 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSGKMHQ*APYKTI
Trigger: AATTGTTTTATATGGTGCTCACTGGTGCATTTTTCC...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTGGAAAAATGCACCAGTaGGCACCATATAAAACAATT +
Preference number: 4 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNIGKMHQ*APYKTI
Trigger: AATTGTTTTATATGGTGCTCACTGGTGCATTTTTCC...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATTCAGACTCAGAAAAATaGGCACATGGGCAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYSDSEK*AHGQVE
Trigger: CTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGA...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGACAGCATTTATTCCCTTaGAATGAGTTACTACACCTA +
Preference number: 4 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRQHLFP*NELLHL
Trigger: TAGGTGTAGTAACTCATTTCAAGGGAATAAATGCTG...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATACACTATCTATTCAGCAGCTaGAGCCCAAGAACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SIRIIIYSAAEAQELLIHYLFSS*SPRTAD
Trigger: ATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATA...GTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGAAATAAAAACCACAGCTaGTTTTCTGCATCAGGAATG +
Preference number: 4 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRNKNHS*FSASGM
Trigger: CATTCCTGATGCAGAAAATCAGCTGTGGTTTTTATT...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGAACTTTCTCCGAGTATaGGTCAGACTCACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMNFLRV*VRLTRA
Trigger: AGCTCTGGTGAGTCTGACTCATACTCGGAGAAAGTT...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGAACTTTCTCCGAGTATaGGTCAGACTCACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VMKKHPGMCQEVHYLVLKNFLRV*VRLTRA
Trigger: AGCTCTGGTGAGTCTGACTCATACTCGGAGAAAGTT...CTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680581.1
CDS-3UTR TCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACCACAAAAGGATGCAGTaGGTGTTAGGTCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYHKRMQ*VLGLFT
Trigger: AGTAAACAGACCTAACACTCACTGCATCCTTTTGTG...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGTTGAAGTCAGGAGTTTaGGATCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLLKSGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGATCTCAAACTCCTGACTTCAA...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681948.1
CDS-3UTR GCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACCTCCCACACCACAATTaGCTAAGAAATTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYLPHHN*LRNCCC
Trigger: ACAGCAACAATTTCTTAGGCAATTGTGGTGTGGGAG...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTAAACAGGTCCACATCCTaGATCTTCATTCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLNRSTS*IFIPMA
Trigger: AGCCATCGGAATGAAGATGCAGGATGTGGACCTGTT...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCAAAAATGTCTGCAGATaGTGTTCAGATAAGCGAATC +
Preference number: 4 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSKNVCR*CSDKRI
Trigger: GATTCGCTTATCTGAACAGCATCTGCAGACATTTTT...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACTTAGAGCCTTCAATATaGCAACAGGCAGGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYLEPSI*QQAGLQ
Trigger: TTGCAAACCTGCCTGTTGGCATATTGAAGGCTCTAA...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTGACTCTAGAGGTTaGAACTCTTCAGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHFDSRG*NSSALL
Trigger: CAATAAAGCTGAAGAGTTGCAACCTCTAGAGTCAAA...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTACCACAGCTGATTTTCTaGATCAGGAATGAAATATTG +
Preference number: 4 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLPQLIF*IRNEIL
Trigger: CAATATTTCATTCCTGATGCAGAAAATCAGCTGTGG...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCCCACAGCTGATTTTCTaGATCAGGAATGAAATATTG +
Preference number: 4 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSPQLIF*IRNEIL
Trigger: CAATATTTCATTCCTGATGCAGAAAATCAGCTGTGG...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCTTCTGGTCTATTCGTaGCCATATAATATACTTTGC +
Preference number: 4 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHLLVYS*PYNILC
Trigger: GCAAAGTATATTATATGGCCACGAATAGACCAGAAG...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCCTTAACAATCATCAATaGCTAGTTCAGACCAAAGTC +
Preference number: 4 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSLNNHQ*LVQTKV
Trigger: GACTTTGGTCTGAACTAGCCATTGATGATTGTTAAG...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTCTTAACAATCATCAATaGCTAGTTCAGACCAAAGTC +
Preference number: 4 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNILNNHQ*LVQTKV
Trigger: GACTTTGGTCTGAACTAGCCATTGATGATTGTTAAG...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATAGAAACGGTAAAGAATaGTTAGGAGGAAGCACTCTA +
Preference number: 4 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNRNGKE*LGGSTL
Trigger: TAGAGTGCTTCCTCCTAACCATTCTTTACCGTTTCT...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATACACTTGACTCTGCTTCCTTaGGGAATGCCCATTTTACAG +
Preference number: 4 (lower is better)
Translates to: SIRIIIYSAAEAQELLIHLTLLP*GMPILQ
Trigger: CTGTAAAATGGGCATTCCCCAAGGAAGCAGAGTCAA...GTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTAGAAAAATGAGCACATaGGCAAGTAGAGGGGAATAC +
Preference number: 4 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCRKMST*ASRGEY
Trigger: GTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCT...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAAAACATAGCTTTGGCATaGTGGCATGTTCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: ISLKLTILHAHIPKGQKENIALA*WHVQKL
Trigger: AAGCTTCTGAACATGCCACCATGCCAAAGCTATGTT...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp AAGAAACCCTTCGCATGTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACAACTCTTCAGCTTTATTaGTTCAGCAATTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: KKPFACHEEASWYVSRSTTLQLY*FSNLVP
Trigger: TGGGACTAAATTGCTGAACCAATAAAGCTGAAGAGT...TGTACTTCTTGACACATACCAGGATGCTTCTTCATGACATGCGAAGGGTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680581.1
CDS-3UTR CCA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTATATCAAGTGCCTATTaGCTGAACAGAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNIISSAY*LNRTVF
Trigger: GAATACAGTTCTGTTCAGCCAATAGGCACTTGATAT...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACATATCAAGTGCCTATTaGCTGAACAGAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHISSAY*LNRTVF
Trigger: GAATACAGTTCTGTTCAGCCAATAGGCACTTGATAT...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGAGTTCTTATTATGAGGTaGTTAAAGACACAGAACCAC +
Preference number: 4 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRVLIMR*LKTQNH
Trigger: GTGGTTCTGTGTCTTTAACCACCTCATAATAAGAAC...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATCAGGATGTAGTAGAATaGATACACAGAATGCAATCA +
Preference number: 4 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNQDVVE*IHRMQS
Trigger: TGATTGCATTCTGTGTATTCATTCTACTACATCCTG...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAAAAAGATATGGGATTGTaGGGTGTATGCAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQKDMGL*GVCNSL
Trigger: AAGACTGTTGCATACACCTCACAATCCCATATCTTT...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382103.7
ENST00000681948.1
CDS-3UTR TCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAATTTACAGGCACACTGTaGCTTACACATCTCAACAAA +
Preference number: 4 (lower is better)
Translates to: ISLKLTILHAHIPKGQKEFTGTL*LTHLNK
Trigger: TTTGTTGAGATGTGTAAGTCACAGTGTGCCTGTAAA...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGCGAAAGTTTATACCTTaGCTCTGCTTCCTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMRKFIP*LCFLGE
Trigger: TTCCCCAAGGAAGCAGAGTCAAGGTATAAACTTTCG...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCGAGACCCACTGCTTTTaGGTCAAAACGAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFETHCF*VKTKVY
Trigger: ATAAACTTTCGTTTTGACTCAAAAGCAGTGGGTCTC...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGCATGTTTGGAATCCGTaGCCCTGGTTATCACTTAAG +
Preference number: 4 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLHVWNP*PWLSLK
Trigger: CTTAAGTGATAACCAGGGTCACGGATTCCAAACATG...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAAGGTTATCTTCGGCAATaGTTGGTAATGTATCATCCA +
Preference number: 4 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQGYLRQ*LVMYHP
Trigger: TGGATGATACATTACCAATCATTGCCGAAGATAACC...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCCAAGTGCCTATTGGCTaGACAGAACTGTATTCAATA +
Preference number: 4 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFQVPIG*TELYSI
Trigger: TATTGAATACAGTTCTGTTCAGCCAATAGGCACTTG...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp CATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGCCCTCCCACACCACAATTaGCTAAGAAATTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HEEASWYVSRSTLSSFKALPHHN*LRNCCC
Trigger: ACAGCAACAATTTCTTAGGCAATTGTGGTGTGGGAG...GGCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR GCA 90 bp GTGACAGCTTTGTCACGGTGTTCATCTAGTGTTTTAAGTGTCATAGCTTTCTTTCACAGGCTCAAAACCTaGAGTGATCATGGATTTAAA +
Preference number: 4 (lower is better)
Translates to: VTALSRCSSSVLSVIAFFHRLKT*SDHGFK
Trigger: TTTAAATCCATGATCACTGCAGGTTTTGAGCCTGTG...AAAGAAAGCTATGACACTTAAAACACTAGATGAACACCGTGACAAAGCTGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503150.1
CDS-3UTR GCA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTAATGAATACACAGAATaGAATCAGGCCCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCNEYTE*NQAQVP
Trigger: AGGAACTTGGGCCTGATTGCATTCTGTGTATTCATT...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp GTGACAGCTTTGTCACGGTGTTCATCTAGTGTTTTAAGTGTCATAGCTTTCTTTAATGAATACACAGAATaGAATCAGGCCCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VTALSRCSSSVLSVIAFFNEYTE*NQAQVP
Trigger: AGGAACTTGGGCCTGATTGCATTCTGTGTATTCATT...AAAGAAAGCTATGACACTTAAAACACTAGATGAACACCGTGACAAAGCTGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503150.1
CDS-3UTR GCA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCAATGAATACACAGAATaGAATCAGGCCCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFNEYTE*NQAQVP
Trigger: AGGAACTTGGGCCTGATTGCATTCTGTGTATTCATT...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAAAATGAATACACAGAATaGAATCAGGCCCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQNEYTE*NQAQVP
Trigger: AGGAACTTGGGCCTGATTGCATTCTGTGTATTCATT...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAAACATGTATAGCAAGCTaGACTGCCAGCATTTACATT +
Preference number: 4 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQTCIAS*TASIYI
Trigger: AATGTAAATGCTGGCAGTGCAGCTTGCTATACATGT...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTACAGTTGGCTACTGTATaGACACCAGCCAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLQLATV*TPASFI
Trigger: TATAAAGCTGGCTGGTGTCCATACAGTAGCCAACTG...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACTTAAAGCAGGACTTCTaGTCTATTCGTGGCCATATA +
Preference number: 4 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYLKQDF*SIRGHI
Trigger: TATATGGCCACGAATAGACCAGAAGTCCTGCTTTAA...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACCATGAAGAAGCATCCTaGTATGTGTCAAGAAGTACA +
Preference number: 4 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYHEEAS*YVSRST
Trigger: TGTACTTCTTGACACATACCAGGATGCTTCTTCATG...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAACATGAAGAAGCATCCTaGTATGTGTCAAGAAGTACA +
Preference number: 4 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQHEEAS*YVSRST
Trigger: TGTACTTCTTGACACATACCAGGATGCTTCTTCATG...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAAAGAAACGGTAAAGAATaGTTAGGAGGAAGCACTCTA +
Preference number: 4 (lower is better)
Translates to: ISLKLTILHAHIPKGQKERNGKE*LGGSTL
Trigger: TAGAGTGCTTCCTCCTAACCATTCTTTACCGTTTCT...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp GTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGTTGACTCTGCTTCCTTaGGGAATGCCCATTTTACAG +
Preference number: 4 (lower is better)
Translates to: VMKKHPGMCQEVHYLVLKLTLLP*GMPILQ
Trigger: CTGTAAAATGGGCATTCCCCAAGGAAGCAGAGTCAA...CTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTATTGACTCTGCTTCCTTaGGGAATGCCCATTTTACAG +
Preference number: 4 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLLTLLP*GMPILQ
Trigger: CTGTAAAATGGGCATTCCCCAAGGAAGCAGAGTCAA...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp AAATTCCCTTCCCTGCCATGTATAAGTAACACATTGTGTAGTGACCAAAAGAATAGAAAAATGAGCACATaGGCAAGTAGAGGGGAATAC +
Preference number: 4 (lower is better)
Translates to: KFPSLPCISNTLCSDQKNRKMST*ASRGEY
Trigger: GTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCT...ATTCTTTTGGTCACTACACAATGTGTTACTTATACATGGCAGGGAAGGGAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTAATAGCTTTGGCATGGTaGCATGTTCAGAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLIALAW*HVQKLQ
Trigger: CTGAAGCTTCTGAACATGCCACCATGCCAAAGCTAT...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATGTTCTTATTATGAGGTaGTTAAAGACACAGAACCAC +
Preference number: 4 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNVLIMR*LKTQNH
Trigger: GTGGTTCTGTGTCTTTAACCACCTCATAATAAGAAC...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCGTTGTTTTCAGCTGTTaGTTATTTTCCTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSVVFSC*LFSSVK
Trigger: TTTCACAGAGGAAAATAACCAACAGCTGAAAACAAC...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATAGCTTCATATTCTCATaGCTAAAATCCCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYSFIFS*LKSPTV
Trigger: AACCGTGGGGGATTTTAGCCATGAGAATATGAAGCT...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GATCATGGATTTAAAGCAGGACTTCTGGTCTATTCGTGGCCATATAATATACTTAAAGATATGGGATTGTaGGGTGTATGCAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: DHGFKAGLLVYSWPYNILKDMGL*GVCNSL
Trigger: AAGACTGTTGCATACACCTCACAATCCCATATCTTT...AAGTATATTATATGGCCACGAATAGACCAGAAGTCCTGCTTTAAATCCATGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR TCA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGTCTCAAAATAGTCATTaGCTTCCAAGGTGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLSQNSH*LPRWSS
Trigger: GCTTGACCACCTTGGAAGTCAATGACTATTTTGAGA...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCCAGCATTTATTCCCTTaGAATGAGTTACTACACCTA +
Preference number: 4 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFQHLFP*NELLHL
Trigger: TAGGTGTAGTAACTCATTTCAAGGGAATAAATGCTG...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp AGGAAAGTAAAAAGTAAGGCACAAAAGGATGCAGTGAGTGTTAGGTCTGTTTACAATAAAAACCACAGCTaGTTTTCTGCATCAGGAATG +
Preference number: 4 (lower is better)
Translates to: RKVKSKAQKDAVSVRSVYNKNHS*FSASGM
Trigger: CATTCCTGATGCAGAAAATCAGCTGTGGTTTTTATT...GTAAACAGACCTAACACTCACTGCATCCTTTTGTGCCTTACTTTTTACTTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAAAATAAAAACCACAGCTaGTTTTCTGCATCAGGAATG +
Preference number: 4 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQNKNHS*FSASGM
Trigger: CATTCCTGATGCAGAAAATCAGCTGTGGTTTTTATT...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATACACAACAAAGGCCAATTATaGGGCTTACCAATCAGTACT +
Preference number: 4 (lower is better)
Translates to: SIRIIIYSAAEAQELLIHNKGQL*GLPIST
Trigger: AGTACTGATTGGTAAGCCTCATAATTGGCCTTTGTT...GTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp AAATTCCCTTCCCTGCCATGTATAAGTAACACATTGTGTAGTGACCAAAAGAATCAAGTGCCTATTGGCTaGACAGAACTGTATTCAATA +
Preference number: 4 (lower is better)
Translates to: KFPSLPCISNTLCSDQKNQVPIG*TELYSI
Trigger: TATTGAATACAGTTCTGTTCAGCCAATAGGCACTTG...ATTCTTTTGGTCACTACACAATGTGTTACTTATACATGGCAGGGAAGGGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAAGGTTATTTTCCTCTGTaGAATATAACTCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: ISLKLTILHAHIPKGQKEGYFPL*NITLRM
Trigger: CATCCTGAGAGTTATATTTCACAGAGGAAAATAACC...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACCACAAAAGGATGCAGTaGGTGTTAGGTCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDHKRMQ*VLGLFT
Trigger: AGTAAACAGACCTAACACTCACTGCATCCTTTTGTG...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp AAATTCCCTTCCCTGCCATGTATAAGTAACACATTGTGTAGTGACCAAAAGAATCACAGGCTCAAAACCTaGAGTGATCATGGATTTAAA +
Preference number: 4 (lower is better)
Translates to: KFPSLPCISNTLCSDQKNHRLKT*SDHGFK
Trigger: TTTAAATCCATGATCACTGCAGGTTTTGAGCCTGTG...ATTCTTTTGGTCACTACACAATGTGTTACTTATACATGGCAGGGAAGGGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp AAATTCCCTTCCCTGCCATGTATAAGTAACACATTGTGTAGTGACCAAAAGAATTATAGCAAGCTGCACTaGCAGCATTTACATTTGCAA +
Preference number: 4 (lower is better)
Translates to: KFPSLPCISNTLCSDQKNYSKLH*QHLHLQ
Trigger: TTGCAAATGTAAATGCTGGCAGTGCAGCTTGCTATA...ATTCTTTTGGTCACTACACAATGTGTTACTTATACATGGCAGGGAAGGGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAAATTCTGTATATCAAGTaGCTATTGGCTGAACAGAAC +
Preference number: 4 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQILYIK*LLAEQN
Trigger: GTTCTGTTCAGCCAATAGGCACTTGATATACAGAAT...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp CATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGCCAGAAACGGTAAAGAATaGTTAGGAGGAAGCACTCTA +
Preference number: 4 (lower is better)
Translates to: HEEASWYVSRSTLSSFKARNGKE*LGGSTL
Trigger: TAGAGTGCTTCCTCCTAACCATTCTTTACCGTTTCT...GGCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CCA 90 bp TCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATACACGATAATTCTTTGTTGTaGGAGTTGTCCCATGCATTG +
Preference number: 4 (lower is better)
Translates to: SIRIIIYSAAEAQELLIHDNSLL*ELSHAL
Trigger: CAATGCATGGGACAACTCCCACAACAAAGAATTATC...GTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGAGAAAAATGAGCACATaGGCAAGTAGAGGGGAATAC +
Preference number: 4 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMRKMST*ASRGEY
Trigger: GTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCT...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp GTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGAACATAGCTTTGGCATaGTGGCATGTTCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: VMKKHPGMCQEVHYLVLKNIALA*WHVQKL
Trigger: AAGCTTCTGAACATGCCACCATGCCAAAGCTATGTT...CTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAAACTCTTCAGCTTTATTaGTTCAGCAATTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQTLQLY*FSNLVP
Trigger: TGGGACTAAATTGCTGAACCAATAAAGCTGAAGAGT...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAAGTTCTTATTATGAGGTaGTTAAAGACACAGAACCAC +
Preference number: 4 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQVLIMR*LKTQNH
Trigger: GTGGTTCTGTGTCTTTAACCACCTCATAATAAGAAC...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATAATCATTTAAGGGTCTaGCAGAGGTTAGTACATCTC +
Preference number: 4 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYNHLRV*QRLVHL
Trigger: GAGATGTACTAACCTCTGCCAGACCCTTAAATGATT...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTAAGCTTCATATTCTCATaGCTAAAATCCCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLSFIFS*LKSPTV
Trigger: AACCGTGGGGGATTTTAGCCATGAGAATATGAAGCT...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp TCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATACACCAGCATTTATTCCCTTaGAATGAGTTACTACACCTA +
Preference number: 4 (lower is better)
Translates to: SIRIIIYSAAEAQELLIHQHLFP*NELLHL
Trigger: TAGGTGTAGTAACTCATTTCAAGGGAATAAATGCTG...GTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTAACCAAACTGCGAGTTTaGTTTAAAATTCCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLTKLRV*FKIPFP
Trigger: AGGGAAGGGAATTTTAAATCAAACTCGCAGTTTGGT...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGACCAAACTGCGAGTTTaGTTTAAAATTCCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VMKKHPGMCQEVHYLVLKTKLRV*FKIPFP
Trigger: AGGGAAGGGAATTTTAAATCAAACTCGCAGTTTGGT...CTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680581.1
CDS-3UTR TCA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATGGTTATTTTCCTCTGTaGAATATAACTCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYGYFPL*NITLRM
Trigger: CATCCTGAGAGTTATATTTCACAGAGGAAAATAACC...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp TCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATACACAAAAATGTCTGCAGATaGTGTTCAGATAAGCGAATC +
Preference number: 4 (lower is better)
Translates to: SIRIIIYSAAEAQELLIHKNVCR*CSDKRI
Trigger: GATTCGCTTATCTGAACAGCATCTGCAGACATTTTT...GTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp AAATTCCCTTCCCTGCCATGTATAAGTAACACATTGTGTAGTGACCAAAAGAATAAAAATGTCTGCAGATaGTGTTCAGATAAGCGAATC +
Preference number: 4 (lower is better)
Translates to: KFPSLPCISNTLCSDQKNKNVCR*CSDKRI
Trigger: GATTCGCTTATCTGAACAGCATCTGCAGACATTTTT...ATTCTTTTGGTCACTACACAATGTGTTACTTATACATGGCAGGGAAGGGAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGACATGTATAGCAAGCTaGACTGCCAGCATTTACATT +
Preference number: 4 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLTCIAS*TASIYI
Trigger: AATGTAAATGCTGGCAGTGCAGCTTGCTATACATGT...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACTTAAAGCAGGACTTCTaGTCTATTCGTGGCCATATA +
Preference number: 4 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDLKQDF*SIRGHI
Trigger: TATATGGCCACGAATAGACCAGAAGTCCTGCTTTAA...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTAAGAAACGGTAAAGAATaGTTAGGAGGAAGCACTCTA +
Preference number: 4 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLRNGKE*LGGSTL
Trigger: TAGAGTGCTTCCTCCTAACCATTCTTTACCGTTTCT...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACTGTTTACAAACAGTCTaGGACAATGTACAACGTCAC +
Preference number: 4 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDCLQTV*DNVQRH
Trigger: GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACA...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGATACACACTCTTCAGCTTTATTaGTTCAGCAATTTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SIRIIIYSAAEAQELLIHTLQLY*FSNLVP
Trigger: TGGGACTAAATTGCTGAACCAATAAAGCTGAAGAGT...GTGTATCAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAAGTTGTTTTCAGCTGTTaGTTATTTTCCTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQVVFSC*LFSSVK
Trigger: TTTCACAGAGGAAAATAACCAACAGCTGAAAACAAC...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGAATCATTTAAGGGTCTaGCAGAGGTTAGTACATCTC +
Preference number: 4 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLNHLRV*QRLVHL
Trigger: GAGATGTACTAACCTCTGCCAGACCCTTAAATGATT...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR TCA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACGGTTATTTTCCTCTGTaGAATATAACTCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDGYFPL*NITLRM
Trigger: CATCCTGAGAGTTATATTTCACAGAGGAAAATAACC...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTAAAAAATGTCTGCAGATaGTGTTCAGATAAGCGAATC +
Preference number: 4 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLKNVCR*CSDKRI
Trigger: GATTCGCTTATCTGAACAGCATCTGCAGACATTTTT...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGTTTGACTCTAGAGGTTaGAACTCTTCAGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLFDSRG*NSSALL
Trigger: CAATAAAGCTGAAGAGTTGCAACCTCTAGAGTCAAA...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR GCA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGCCACAGCTGATTTTCTaGATCAGGAATGAAATATTG +
Preference number: 4 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLPQLIF*IRNEIL
Trigger: CAATATTTCATTCCTGATGCAGAAAATCAGCTGTGG...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTACTTCTGGTCTATTCGTaGCCATATAATATACTTTGC +
Preference number: 4 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLLLVYS*PYNILC
Trigger: GCAAAGTATATTATATGGCCACGAATAGACCAGAAG...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTACTTAACAATCATCAATaGCTAGTTCAGACCAAAGTC +
Preference number: 4 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLLNNHQ*LVQTKV
Trigger: GACTTTGGTCTGAACTAGCCATTGATGATTGTTAAG...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTAATATCAAGTGCCTATTaGCTGAACAGAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLISSAY*LNRTVF
Trigger: GAATACAGTTCTGTTCAGCCAATAGGCACTTGATAT...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
3UTR CAA 72 bp AGCATTTACATTTGCAACAACATTTCAATCCCTTTTTaGACTCTAGAGGTTGCAACTCTTCAGCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: SIYICNNISIPF*TLEVATLQLYW
Trigger: CCAATAAAGCTGAAGAGTTGCAACCTCTAGAGTCAAAAAAGGGATTGAAATGTTGTTGCAAATGTAAATGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CCA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGGTTGTTTTCAGCTGTTaGTTATTTTCCTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLVVFSC*LFSSVK
Trigger: TTTCACAGAGGAAAATAACCAACAGCTGAAAACAAC...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS TCA 90 bp CCGGCGACACCAGCCGCTCTCCCGCCGCGAAGCTCTCGCGGTTCATaGCAGCGGTGGCGACAGTGGCGAATAAGCGGGAGCACTAGCTCC +
Preference number: 5 (lower is better)
Translates to: PATPAALPPRSSRGS*QRWRQWRISGSTSS
Trigger: GGAGCTAGTGCTCCCGCTTATTCGCCACTGTCGCCACCGCTGTCATGAACCGCGAGAGCTTCGCGGCGGGAGAGCGGCTGGTGTCGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382103.7
ENST00000514585.5
ENST00000680581.1
ENST00000680824.1
ENST00000681640.1
ENST00000681948.1
CDS TCA 90 bp GGGGAGGGGACCGACAGCTCGGTACCTTCTCCAGAAGCAGCCGTATaGGGTGCTCATGCGAGCGGCGGGCCTCACAGCCCTGCCGCACGT +
Preference number: 5 (lower is better)
Translates to: GEGTDSSVPSPEAAV*GAHASGGPHSPAAR
Trigger: ACGTGCGGCAGGGCTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGGAGAAGGTACCGAGCTGTCGGTCCCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680824.1
ENST00000681341.1
CDS TCA 90 bp CCAGCCTGGGCGAAAGAGCGAGACTCTTCTCCAGAAGCAGCCGTATaGGGTGCTCATGCGAGCGGCGGGCCTCACAGCCCTGCCGCACGT +
Preference number: 5 (lower is better)
Translates to: PAWAKERDSSPEAAV*GAHASGGPHSPAAR
Trigger: ACGTGCGGCAGGGCTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGGAGAAGAGTCTCGCTCTTTCGCCCAGGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000681948.1
CDS GCA 90 bp GCGGGAGCACTAGCTCCACACGCCAGACACACGACGGAACCAGAATaGAACTCGCCGCCTGGACGGTACGGCAGCGCCTTGGGACAAAAA +
Preference number: 5 (lower is better)
Translates to: AGALAPHARHTTEPE*NSPPGRYGSALGQK
Trigger: TTTTTGTCCCAAGGCGCTGCCGTACCGTCCAGGCGGCGAGTTGCATTCTGGTTCCGTCGTGTGTCTGGCGTGTGGAGCTAGTGCTCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680581.1
ENST00000681948.1
CDS TCA 90 bp CCCCTCCTAACAACACCATTTGGCTTTCACTGGCTTTGGCAAGGCTaGGAAGGCACAGACCGCAGTCGGTCAGCTAGGGCAAGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: PLLTTPFGFHWLWQG*EGTDRSRSARASQA
Trigger: AGCTTGGCTTGCCCTAGCTGACCGACTGCGGTCTGTGCCTTCTCAGCCTTGCCAAAGCCAGTGAAAGCCAAATGGTGTTGTTAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS-3UTR CAA 90 bp AGGTCTGTACGCAGCTCGTCACCTTCCAAAACATTTTCTATCACCACAGGCTCACCATTCTCTGGACACTaGCCCGGGTGTGGTGGCGGG +
Preference number: 5 (lower is better)
Translates to: RSVRSSSPSKTFSITTGSPFSGH*PGCGGG
Trigger: CCCGCCACCACACCCGGGCAAGTGTCCAGAGAATGG...TGAGCCTGTGGTGATAGAAAATGTTTTGGAAGGTGACGAGCTGCGTACAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358971.7
CDS CCA 90 bp TTGGCCACGCGCTGTAGCTCACTCACGCCTGTAATCCGAGCACTTTaGAAGGCCAAGAATGGCCGATCACTTGAAGTCAGGAGTTTGAGA +
Preference number: 5 (lower is better)
Translates to: LATRCSSLTPVIRAL*KAKNGRSLEVRSLR
Trigger: TCTCAAACTCCTGACTTCAAGTGATCGGCCATTCTTGGCCTTCCAAAGTGCTCGGATTACAGGCGTGAGTGAGCTACAGCGCGTGGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS CCA 90 bp TCCCCAGTGAAGATGCTTCAAACCAGGGCGTTACGACTGGGGCGGTaGGACGTGGAGAAGGGCGGTAGTTGTCAAACTTCAGTGAAATTT +
Preference number: 5 (lower is better)
Translates to: SPVKMLQTRALRLGR*DVEKGGSCQTSVKF
Trigger: AAATTTCACTGAAGTTTGACAACTACCGCCCTTCTCCACGTCCCACCGCCCCAGTCGTAACGCCCTGGTTTGAAGCATCTTCACTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS-3UTR CAA 90 bp GGCCCAAGTTCCTGGACTTTAGCCTCCACTGCTTTCAGGTCTGTACGCAGCTCGGGAACTACAAAGCAGTaGGCTACTGTATGGACACCA +
Preference number: 5 (lower is better)
Translates to: GPSSWTLASTAFRSVRSSGTTKQ*ATVWTP
Trigger: TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCC...CGAGCTGCGTACAGACCTGAAAGCAGTGGAGGCTAAAGTCCAGGAACTTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR CAA 90 bp TATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAAGCCTGCAGCTTTTGGTaGCACAGCAGAAATATCACC +
Preference number: 5 (lower is better)
Translates to: YSHSQFAWTQEAQPWLQKACSFW*HSRNIT
Trigger: GGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGGC...TTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CAA 90 bp ATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGCCTGCAGCTTTTGGTaGCACAGCAGAAATATCACC +
Preference number: 5 (lower is better)
Translates to: MDPRGTTLAPETCLVKSIACSFW*HSRNIT
Trigger: GGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGGC...GATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CAA 90 bp ATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACTCCACAGAGCTGGGTTaGAGAAACATAGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: IATHSLHGPKRHNPGSRNSTELG*RNIALA
Trigger: TGCCAAAGCTATGTTTCTCAAACCCAGCTCTGTGGA...GTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CAA 90 bp GAAAGTATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCTCCACAGAGCTGGGTTaGAGAAACATAGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: ESIATHSLHGPKRHNPGSSTELG*RNIALA
Trigger: TGCCAAAGCTATGTTTCTCAAACCCAGCTCTGTGGA...GGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CAA 90 bp AGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTCTCCCACACCACAATaGCCTAAGAAATTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: RGTTLAPETCLVKSIEPSSPTPQ*PKKLLL
Trigger: CAGCAACAATTTCTTAGGCAATTGTGGTGTGGGAGA...GCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CAA 90 bp AGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTGTCACGATAGCCACTCACAGTTaGCATGGACCCAAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: RNLSGKKHRAKLSDSFVTIATHS*HGPKRH
Trigger: GTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT...CGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CAA 90 bp ATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACACGAAAGTTTATACCTaGACTCTGCTTCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: IATHSLHGPKRHNPGSRNTKVYT*TLLPWG
Trigger: TCCCCAAGGAAGCAGAGTCAAGGTATAAACTTTCGT...GTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CAA 90 bp CCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTCAATTGCCTAAGAAATaGTTGCTGTCCATGATTGCA +
Preference number: 5 (lower is better)
Translates to: PLTVCMDPRGTTLAPETCQLPKK*LLSMIA
Trigger: TGCAATCATGGACAGCAACAATTTCTTAGGCAATTG...ACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS TCA 90 bp GAGTTAGCATACAGTCTACAAACACCATTATGTGTTCTGAGTCGTTaGGGGTTGGTGAAAGATGGAGGTGCGAACTTTGCCCTTTCCGCG +
Preference number: 5 (lower is better)
Translates to: ELAYSLQTPLCVLSR*GLVKDGGANFALSA
Trigger: CGCGGAAAGGGCAAAGTTCGCACCTCCATCTTTCACCAACCCTCAACGACTCAGAACACATAATGGTGTTTGTAGACTGTATGCTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS-3UTR CAA 90 bp CCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTGCTTCTTATAGCCATTaGATCCAAGTGACAATAAAG +
Preference number: 5 (lower is better)
Translates to: PLTVCMDPRGTTLAPETCASYSH*IQVTIK
Trigger: CTTTATTGTCACTTGGATCAAATGGCTATAAGAAGC...ACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CAA 90 bp CCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAACCTGTTATATCAAGTGCCTATaGGCTGAACAGAACTGTATT +
Preference number: 5 (lower is better)
Translates to: PLTVCMDPRGTTLAPETCYIKCL*AEQNCI
Trigger: AATACAGTTCTGTTCAGCCAATAGGCACTTGATATA...ACAGGTTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680581.1
CDS TCA 90 bp CTCTTCCTATCAGGCACCCTTGGAGCAAAACAGGATGTAGTAGAATaGATACACAGAATGCAATCAGGCCCAAGTTCCTGGACTTTAGCC +
Preference number: 5 (lower is better)
Translates to: LFLSGTLGAKQDVVE*IHRMQSGPSSWTLA
Trigger: GGCTAAAGTCCAGGAACTTGGGCCTGATTGCATTCTGTGTATTCATTCTACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503150.1
ENST00000505513.1
CDS TCA 90 bp TACCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTaGGTGACAGCTTTGTCACGGTGTTCATCTAGTGTTTTAAGTGTC +
Preference number: 5 (lower is better)
Translates to: YLAPETCLVKSIEPS*VTALSRCSSSVLSV
Trigger: GACACTTAAAACACTAGATGAACACCGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515272.1
CDS TCA 90 bp CATGCTACTCCCACACCAAGAGATGGAGTCTACTTCCTCTCCACTTaGATCTGGGCTGAATTTAGTAACTTGCTTGGCCAGGAAGAATCT +
Preference number: 5 (lower is better)
Translates to: HATPTPRDGVYFLST*IWAEFSNLLGQEES
Trigger: AGATTCTTCCTGGCCAAGCAAGTTACTAAATTCAGCCCAGATTCAAGTGGAGAGGAAGTAGACTCCATCTCTTGGTGTGGGAGTAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681071.1
CDS-3UTR CAA 90 bp AGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGCTGAGTGACAGCTTTGTCACGTCTCCCACACCACAATaGCCTAAGAAATTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: RNLSGKKHRAKLSDSFVTSPTPQ*PKKLLL
Trigger: CAGCAACAATTTCTTAGGCAATTGTGGTGTGGGAGA...CGTGACAAAGCTGTCACTCAGCTTGGCTCGATGCTTTTTACCAGACAGGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CAA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTAATAGCCACTCACAGTTaGCATGGACCCAAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLIATHS*HGPKRH
Trigger: GTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTATAGCCACTCACAGTTaGCATGGACCCAAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: YHSLIEREFISRGPKNQTIATHS*HGPKRH
Trigger: GTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTGCCTGCAGCTTTTGGTaGCACAGCAGAAATATCACC +
Preference number: 5 (lower is better)
Translates to: YHSLIEREFISRGPKNQTACSFW*HSRNIT
Trigger: GGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGGC...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TCAAAACCTGCAGTGATCATGGATTTAAAGCAGGACTTCTGGTCTATTCGTGGCGGAACTACAAAGCAGTaGGCTACTGTATGGACACCA +
Preference number: 5 (lower is better)
Translates to: SKPAVIMDLKQDFWSIRGGTTKQ*ATVWTP
Trigger: TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCC...GCCACGAATAGACCAGAAGTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR CAA 90 bp TATAGCCACTCACAGTTTGCATGGACCCAAGAGGCACAACCCTGGCTCCAGAAAGCTTCTTATAGCCATTaGATCCAAGTGACAATAAAG +
Preference number: 5 (lower is better)
Translates to: YSHSQFAWTQEAQPWLQKASYSH*IQVTIK
Trigger: CTTTATTGTCACTTGGATCAAATGGCTATAAGAAGC...TTTCTGGAGCCAGGGTTGTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000503150.1
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CAA 90 bp AAGAGGCACAACCCTGGCTCCAGAAACCTGTCTGGTAAAAAGCATCGAGCCAAGAGCACTAATGACATTTaGGGCTGGATAATTCTTTGT +
Preference number: 5 (lower is better)
Translates to: KRHNPGSRNLSGKKHRAKSTNDI*GWIILC
Trigger: ACAAAGAATTATCCAGCCCAAAATGTCATTAGTGCT...CTTGGCTCGATGCTTTTTACCAGACAGGTTTCTGGAGCCAGGGTTGTGCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS TCA 90 bp TTTAATGAAATTAAAATACATGAACGCTGGCAGGAGGGAGACCTGTaGAGTTCCGCGGAAAGCTCGTGGTTCGAGTTAGCATACAGTCTA +
Preference number: 5 (lower is better)
Translates to: FNEIKIHERWQEGDL*SSAESSWFELAYSL
Trigger: TAGACTGTATGCTAACTCGAACCACGAGCTTTCCGCGGAACTTCACAGGTCTCCCTCCTGCCAGCGTTCATGTATTTTAATTTCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS TCA 90 bp ATTTACCTATCAGGCACCCTTGGAGCAAAACAGGATGTAGTAGAATaGATACACAGAATGCAATCAGGCCCAAGTTCCTGGACTTTAGCC +
Preference number: 5 (lower is better)
Translates to: IYLSGTLGAKQDVVE*IHRMQSGPSSWTLA
Trigger: GGCTAAAGTCCAGGAACTTGGGCCTGATTGCATTCTGTGTATTCATTCTACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681166.1
ENST00000681640.1
CDS-3UTR CAA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACGGAACTACAAAGCAGTaGGCTACTGTATGGACACCA +
Preference number: 5 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHGTTKQ*ATVWTP
Trigger: TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCC...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTGGAACTACAAAGCAGTaGGCTACTGTATGGACACCA +
Preference number: 5 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNIGTTKQ*ATVWTP
Trigger: TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCC...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp CTCATACCAGTTGCCATAGGAACTACAAAGCAGTTGGCTACTGTATGGACACCAACCAAAGTCTGCTCCTaGACTGAATATTCCCATGAA +
Preference number: 5 (lower is better)
Translates to: LIPVAIGTTKQLATVWTPTKVCS*TEYSHE
Trigger: TTCATGGGAATATTCAGTCAAGGAGCAGACTTTGGT...TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCCTATGGCAACTGGTATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358971.7
CDS-3UTR CAA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCCAGATGAGAAAACATTaGCTACTCTCCCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSQMRKH*LLSQLW
Trigger: CCAGAGCTGGGAGAGTAGCAAATGTTTTCTCATCTG...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCTCTCCCACACCACAATaGCCTAAGAAATTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSSPTPQ*PKKLLL
Trigger: CAGCAACAATTTCTTAGGCAATTGTGGTGTGGGAGA...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACTCTCCCACACCACAATaGCCTAAGAAATTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHSPTPQ*PKKLLL
Trigger: CAGCAACAATTTCTTAGGCAATTGTGGTGTGGGAGA...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTAACGAAAGTTTATACCTaGACTCTGCTTCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLTKVYT*TLLPWG
Trigger: TCCCCAAGGAAGCAGAGTCAAGGTATAAACTTTCGT...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACCCATTCTCTGGACACTaGCCCTTCTCCAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDPFSGH*PFSRSS
Trigger: GCTGCTTCTGGAGAAGGGCAAGTGTCCAGAGAATGG...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382103.7
ENST00000680581.1
CDS-3UTR CAA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGCCATTCTCTGGACACTaGCCCTTCTCCAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMPFSGH*PFSRSS
Trigger: GCTGCTTCTGGAGAAGGGCAAGTGTCCAGAGAATGG...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382103.7
ENST00000680581.1
CDS-3UTR CAA 90 bp CATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGCCGCCTGCAGCTTTTGGTaGCACAGCAGAAATATCACC +
Preference number: 5 (lower is better)
Translates to: HEEASWYVSRSTLSSFKAACSFW*HSRNIT
Trigger: GGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGGC...GGCTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358971.7
ENST00000514585.5
ENST00000680581.1
CDS-3UTR CAA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAAGGAACTACAAAGCAGTaGGCTACTGTATGGACACCA +
Preference number: 5 (lower is better)
Translates to: ISLKLTILHAHIPKGQKEGTTKQ*ATVWTP
Trigger: TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCC...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGATAGCCACTCACAGTTaGCATGGACCCAAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMIATHS*HGPKRH
Trigger: GTGCCTCTTGGGTCCATGCAAACTGTGAGTGGCTAT...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TATCATTCCCTGATAGAGCGAGAATTCATCAGCAGAGGACCTAAGAACCAAACTACCAAAGTCTGCTCCTaGACTGAATATTCCCATGAA +
Preference number: 5 (lower is better)
Translates to: YHSLIEREFISRGPKNQTTKVCS*TEYSHE
Trigger: TTCATGGGAATATTCAGTCAAGGAGCAGACTTTGGT...AGTTTGGTTCTTAGGTCCTCTGCTGATGAATTCTCGCTCTATCAGGGAATGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATACGAAAGTTTATACCTaGACTCTGCTTCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNTKVYT*TLLPWG
Trigger: TCCCCAAGGAAGCAGAGTCAAGGTATAAACTTTCGT...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp CTCATACCAGTTGCCATAGGAACTACAAAGCAGTTGGCTACTGTATGGACACCAAGCACTAATGACATTTaGGGCTGGATAATTCTTTGT +
Preference number: 5 (lower is better)
Translates to: LIPVAIGTTKQLATVWTPSTNDI*GWIILC
Trigger: ACAAAGAATTATCCAGCCCAAAATGTCATTAGTGCT...TGGTGTCCATACAGTAGCCAACTGCTTTGTAGTTCCTATGGCAACTGGTATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358971.7
CDS-3UTR CAA 90 bp CTTACTGCCTTTAAACACCTGTCAAGTCTCTTTATGAACAGGTCCACATCCTGCTTTATAATGACATGTTaGGAATCCGTGACCCTGGTT +
Preference number: 5 (lower is better)
Translates to: LTAFKHLSSLFMNRSTSCFIMTC*ESVTLV
Trigger: AACCAGGGTCACGGATTCCAAACATGTCATTATAAA...GCAGGATGTGGACCTGTTCATAAAGAGACTTGACAGGTGTTTAAAGGCAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CAA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTTCCACAGAGCTGGGTTaGAGAAACATAGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCSTELG*RNIALA
Trigger: TGCCAAAGCTATGTTTCTCAAACCCAGCTCTGTGGA...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp ATTAGCCTTAAACTTACCATCTTACATGCGCACATACCAAAAGGGCAAAAGGAATCCACAGAGCTGGGTTaGAGAAACATAGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: ISLKLTILHAHIPKGQKESTELG*RNIALA
Trigger: TGCCAAAGCTATGTTTCTCAAACCCAGCTCTGTGGA...TTCCTTTTGCCCTTTTGGTATGTGCGCATGTAAGATGGTAAGTTTAAGGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp GCTGGGTTTGAGAAACATAGCTTTGGCATGGTGGCATGTTCAGAAGCTTCAGTAGTCTGTTTACTAAGATaGGCCATAAGAGACATTAAC +
Preference number: 5 (lower is better)
Translates to: AGFEKHSFGMVACSEASVVCLLR*AIRDIN
Trigger: GTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC...TACTGAAGCTTCTGAACATGCCACCATGCCAAAGCTATGTTTCTCAAACCCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGTGTAATCCGAGCACTTaGGAAGGCCAAGAATGGCCG +
Preference number: 5 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLCNPST*EGQEWP
Trigger: CGGCCATTCTTGGCCTTCCAAAGTGCTCGGATTACA...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681948.1
CDS TCA 90 bp CCCTTTCTCCCACACCACAATTGCCTAAGAAATTGTTGCTGTCCATaGTTGCAAGTTCATGTAAAAAGAGTTCAAGTGTACTTTCATCCC +
Preference number: 5 (lower is better)
Translates to: PFLPHHNCLRNCCCP*LQVHVKRVQVYFHP
Trigger: GGGATGAAAGTACACTTGAACTCTTTTTACATGAACTTGCAATCATGGACAGCAACAATTTCTTAGGCAATTGTGGTGTGGGAGAAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
ENST00000681640.1
ENST00000681948.1
CDS-3UTR CAA 90 bp AAGAAACCCTTCGCATGTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTGCCTAAGAAATTGTaGCTGTCCATGATTGCAAGT +
Preference number: 5 (lower is better)
Translates to: KKPFACHEEASWYVSRSTLPKKL*LSMIAS
Trigger: ACTTGCAATCATGGACAGCAACAATTTCTTAGGCAA...TGTACTTCTTGACACATACCAGGATGCTTCTTCATGACATGCGAAGGGTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CAA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTGCCTAAGAAATTGTaGCTGTCCATGATTGCAAGT +
Preference number: 5 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHLPKKL*LSMIAS
Trigger: ACTTGCAATCATGGACAGCAACAATTTCTTAGGCAA...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACGCCTGCAGCTTTTGGTaGCACAGCAGAAATATCACC +
Preference number: 5 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDACSFW*HSRNIT
Trigger: GGTGATATTTCTGCTGTGCAACCAAAAGCTGCAGGC...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TCTATCACCACAGGCTCAAAACCTGCAGTGATCATGGATTTAAAGCAGGACTTCGCTTCTTATAGCCATTaGATCCAAGTGACAATAAAG +
Preference number: 5 (lower is better)
Translates to: SITTGSKPAVIMDLKQDFASYSH*IQVTIK
Trigger: CTTTATTGTCACTTGGATCAAATGGCTATAAGAAGC...GAAGTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGAGCCTGTGGTGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR CAA 90 bp AGGCTCAAAACCTGCAGTGATCATGGATTTAAAGCAGGACTTCTGGTCTATTCGGCTTCTTATAGCCATTaGATCCAAGTGACAATAAAG +
Preference number: 5 (lower is better)
Translates to: RLKTCSDHGFKAGLLVYSASYSH*IQVTIK
Trigger: CTTTATTGTCACTTGGATCAAATGGCTATAAGAAGC...CGAATAGACCAGAAGTCCTGCTTTAAATCCATGATCACTGCAGGTTTTGAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000514585.5
CDS-3UTR CAA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGATTTATAATGACATGTTaGGAATCCGTGACCCTGGTT +
Preference number: 5 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRFIMTC*ESVTLV
Trigger: AACCAGGGTCACGGATTCCAAACATGTCATTATAAA...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp CAGCTTCATATTCTCATGGCTAAAATCCCCCACGGTTATACAGTTAAGCATAGCTTTATAATGACATGTTaGGAATCCGTGACCCTGGTT +
Preference number: 5 (lower is better)
Translates to: QLHILMAKIPHGYTVKHSFIMTC*ESVTLV
Trigger: AACCAGGGTCACGGATTCCAAACATGTCATTATAAA...GCTATGCTTAACTGTATAACCGTGGGGGATTTTAGCCATGAGAATATGAAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTAACTCTTCAGCTTTATaGGTTCAGCAATTTAGTCCC +
Preference number: 5 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNINSSAL*VQQFSP
Trigger: GGGACTAAATTGCTGAACCAATAAAGCTGAAGAGTT...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACTGCCAGCATTTACATTaGCAACAACATTTCAATCCC +
Preference number: 5 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHCQHLH*QQHFNP
Trigger: GGGATTGAAATGTTGTTGCAAATGTAAATGCTGGCA...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TGCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTGCCAGCATTTACATTaGCAACAACATTTCAATCCC +
Preference number: 5 (lower is better)
Translates to: CQQAGLQRQLPKLFVCKHCQHLH*QQHFNP
Trigger: GGGATTGAAATGTTGTTGCAAATGTAAATGCTGGCA...ATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATCAGATGAGAAAACATTaGCTACTCTCCCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYQMRKH*LLSQLW
Trigger: CCAGAGCTGGGAGAGTAGCAAATGTTTTCTCATCTG...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp ATACCCATGTTAGCTAATTTTGATGATGTCTGTGCACAACATCTGAACAAACTACTTGAAGTCAGGAGTTaGAGATCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: IPMLANFDDVCAQHLNKLLEVRS*RSAWPT
Trigger: TGTTGGCCAGGCTGATCTCAAACTCCTGACTTCAAG...TAGTTTGTTCAGATGTTGTGCACAGACATCATCAAAATTAGCTAACATGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681948.1
CDS CCA 90 bp TCAAATTCTGCATATAGAAATGGAAATGATCATTCTGAGGCTGTGTaGGTAAACTGGATTGCATACATAGCACCACTCGTAGCTACCATT +
Preference number: 5 (lower is better)
Translates to: SNSAYRNGNDHSEAV*VNWIAYIAPLVATI
Trigger: AATGGTAGCTACGAGTGGTGCTATGTATGCAATCCAGTTTACCCACACAGCCTCAGAATGATCATTTCCATTTCTATATGCAGAATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681374.1
CDS-3UTR CAA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCACCAAAGTCTGCTCCTaGACTGAATATTCCCATGAA +
Preference number: 5 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFTKVCS*TEYSHE
Trigger: TTCATGGGAATATTCAGTCAAGGAGCAGACTTTGGT...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTAAGCACTAATGACATTTaGGGCTGGATAATTCTTTGT +
Preference number: 5 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLSTNDI*GWIILC
Trigger: ACAAAGAATTATCCAGCCCAAAATGTCATTAGTGCT...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGATGTTGTTTTCAGCTGTaGGTTATTTTCCTCTGTGAA +
Preference number: 5 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRCCFQL*VIFLCE
Trigger: TTCACAGAGGAAAATAACCAACAGCTGAAAACAACA...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp GCCAACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTGTTGTTTTCAGCTGTaGGTTATTTTCCTCTGTGAA +
Preference number: 5 (lower is better)
Translates to: ANRQVCKGSSQNYLSVNICCFQL*VIFLCE
Trigger: TTCACAGAGGAAAATAACCAACAGCTGAAAACAACA...AATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TCTTCGGCAATGATTGGTAATGTATCATCCACTGCCTTCGTCACAGTACAAAGAACCAGAGCTTTATTATaGTTGTTTTCAGCTGTTGGT +
Preference number: 5 (lower is better)
Translates to: SSAMIGNVSSTAFVTVQRTRALL*LFSAVG
Trigger: ACCAACAGCTGAAAACAACAATAATAAAGCTCTGGT...TCTTTGTACTGTGACGAAGGCAGTGGATGATACATTACCAATCATTGCCGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACGTCTGTTTACTAAGATaGGCCATAAGAGACATTAAC +
Preference number: 5 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHVCLLR*AIRDIN
Trigger: GTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TTCAGACTCAGAAAAATGAGCACATGGGCAAGTAGAGGGGAATACACCTGTTTAAAACATCTTTTCCTTTaGGTAAAACAGGTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: FRLRKMSTWASRGEYTCLKHLFL*VKQVSR
Trigger: CCTGCTAACCTGTTTTACCAAAAGGAAAAGATGTTT...TAAACAGGTGTATTCCCCTCTACTTGCCCATGTGCTCATTTTTCTGAGTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TACACATGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACAAACATCTTTTCCTTTaGGTAAAACAGGTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: YTCLTSCLQTVWDNVQRHKHLFL*VKQVSR
Trigger: CCTGCTAACCTGTTTTACCAAAAGGAAAAGATGTTT...GTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACATGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTTTGCCTAAGAAATTGTaGCTGTCCATGATTGCAAGT +
Preference number: 5 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCLPKKL*LSMIAS
Trigger: ACTTGCAATCATGGACAGCAACAATTTCTTAGGCAA...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATGCTTCTTATAGCCATTaGATCCAAGTGACAATAAAG +
Preference number: 5 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNASYSH*IQVTIK
Trigger: CTTTATTGTCACTTGGATCAAATGGCTATAAGAAGC...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATACCAAAGTCTGCTCCTaGACTGAATATTCCCATGAA +
Preference number: 5 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYTKVCS*TEYSHE
Trigger: TTCATGGGAATATTCAGTCAAGGAGCAGACTTTGGT...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp GTCATGAAGAAGCATCCTGGTATGTGTCAAGAAGTACATTATCTAGTTTTAAAGACGAAAGTTTATACCTaGACTCTGCTTCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: VMKKHPGMCQEVHYLVLKTKVYT*TLLPWG
Trigger: TCCCCAAGGAAGCAGAGTCAAGGTATAAACTTTCGT...CTTTAAAACTAGATAATGTACTTCTTGACACATACCAGGATGCTTCTTCATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000680581.1
CDS-3UTR CAA 90 bp GTGAATTCTATGCCCTCAAATTTTAAGCCAGGAGGAATAGAGCTAGAATTCCAAAACTCTTCAGCTTTATaGGTTCAGCAATTTAGTCCC +
Preference number: 5 (lower is better)
Translates to: VNSMPSNFKPGGIELEFQNSSAL*VQQFSP
Trigger: GGGACTAAATTGCTGAACCAATAAAGCTGAAGAGTT...TTGGAATTCTAGCTCTATTCCTCCTGGCTTAAAATTTGAGGGCATAGAATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATATTTCAATCCCTTTTTaGACTCTAGAGGTTGCAACT +
Preference number: 5 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNISIPF*TLEVAT
Trigger: AGTTGCAACCTCTAGAGTCAAAAAAGGGATTGAAAT...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TGTCTGACCTCATGTTTACAAACAGTCTGGGACAATGTACAACGTCACCAAAATTATATCAAGTGCCTATaGGCTGAACAGAACTGTATT +
Preference number: 5 (lower is better)
Translates to: CLTSCLQTVWDNVQRHQNYIKCL*AEQNCI
Trigger: AATACAGTTCTGTTCAGCCAATAGGCACTTGATATA...ATTTTGGTGACGTTGTACATTGTCCCAGACTGTTTGTAAACATGAGGTCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp AAATTCCCTTCCCTGCCATGTATAAGTAACACATTGTGTAGTGACCAAAAGAATTTTATAATGACATGTTaGGAATCCGTGACCCTGGTT +
Preference number: 5 (lower is better)
Translates to: KFPSLPCISNTLCSDQKNFIMTC*ESVTLV
Trigger: AACCAGGGTCACGGATTCCAAACATGTCATTATAAA...ATTCTTTTGGTCACTACACAATGTGTTACTTATACATGGCAGGGAAGGGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp AACAGGCAGGTTTGCAAAGGCAGCTCCCAAAATTATTTGTCTGTAAACATTTTCATTTCAATCCCTTTTTaGACTCTAGAGGTTGCAACT +
Preference number: 5 (lower is better)
Translates to: NRQVCKGSSQNYLSVNIFISIPF*TLEVAT
Trigger: AGTTGCAACCTCTAGAGTCAAAAAAGGGATTGAAAT...GAAAATGTTTACAGACAAATAATTTTGGGAGCTGCCTTTGCAAACCTGCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TCTCAGAAAGTGGGAAAAGGAAACCCAACTCTTATATGCACCAAATGTGTATGTAAACATCTTTTCCTTTaGGTAAAACAGGTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: SQKVGKGNPTLICTKCVCKHLFL*VKQVSR
Trigger: CCTGCTAACCTGTTTTACCAAAAGGAAAAGATGTTT...ACATACACATTTGGTGCATATAAGAGTTGGGTTTCCTTTTCCCACTTTCTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp AGATGTAGTCTAAGCACATTCTGTAGCCCAGTCCTCAATAACAGTTCTTATTATGCTTCTTATAGCCATTaGATCCAAGTGACAATAAAG +
Preference number: 5 (lower is better)
Translates to: RCSLSTFCSPVLNNSSYYASYSH*IQVTIK
Trigger: CTTTATTGTCACTTGGATCAAATGGCTATAAGAAGC...ATAATAAGAACTGTTATTGAGGACTGGGCTACAGAATGTGCTTAGACTACATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGAACTCTTCAGCTTTATaGGTTCAGCAATTTAGTCCC +
Preference number: 5 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLNSSAL*VQQFSP
Trigger: GGGACTAAATTGCTGAACCAATAAAGCTGAAGAGTT...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TTATTGTTAAAGCCAGTAAGTCTGGAATTTCAGACTCAGAAAAATGAGCACATGATTTCAATCCCTTTTTaGACTCTAGAGGTTGCAACT +
Preference number: 5 (lower is better)
Translates to: LLLKPVSLEFQTQKNEHMISIPF*TLEVAT
Trigger: AGTTGCAACCTCTAGAGTCAAAAAAGGGATTGAAAT...CATGTGCTCATTTTTCTGAGTCTGAAATTCCAGACTTACTGGCTTTAACAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACTATATCAAGTGCCTATaGGCTGAACAGAACTGTATT +
Preference number: 5 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDYIKCL*AEQNCI
Trigger: AATACAGTTCTGTTCAGCCAATAGGCACTTGATATA...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACACCAGAGCTTTATTATaGTTGTTTTCAGCTGTTGGT +
Preference number: 5 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDTRALL*LFSAVG
Trigger: ACCAACAGCTGAAAACAACAATAATAAAGCTCTGGT...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp TTATGTTCAATTAGAATTATTATCTATTCAGCAGCTGAAGCCCAAGAACTGCTGACCAGAGCTTTATTATaGTTGTTTTCAGCTGTTGGT +
Preference number: 5 (lower is better)
Translates to: LCSIRIIIYSAAEAQELLTRALL*LFSAVG
Trigger: ACCAACAGCTGAAAACAACAATAATAAAGCTCTGGT...CAGCAGTTCTTGGGCTTCAGCTGCTGAATAGATAATAATTCTAATTGAACATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS-3UTR CAA 90 bp GTCTGTTTACTAAGATTGGCCATAAGAGACATTAACCAACATAATATGACAGACGTCTGTTTACTAAGATaGGCCATAAGAGACATTAAC +
Preference number: 5 (lower is better)
Translates to: VCLLRLAIRDINQHNMTDVCLLR*AIRDIN
Trigger: GTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC...GTCTGTCATATTATGTTGGTTAATGTCTCTTATGGCCAATCTTAGTAAACAGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681948.1
CDS TCA 72 bp CCAGCCGCTCTCCCGCCGCGAAGCTCTCGCGGTTCATaGCAGCGGTGGCGACAGTGGCGAATAAGCGGGAGC +
Preference number: 6 (lower is better)
Translates to: PAALPPRSSRGS*QRWRQWRISGS
Trigger: GCTCCCGCTTATTCGCCACTGTCGCCACCGCTGTCATGAACCGCGAGAGCTTCGCGGCGGGAGAGCGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382103.7
ENST00000514585.5
ENST00000680581.1
ENST00000680824.1
ENST00000681640.1
ENST00000681948.1
CDS GCA 72 bp GGACACTTGCCCTTCTCCAGAAGCAGCCGTATGAGGTaGTCATGCGAGCGGCGGGCCTCACAGCCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: GHLPFSRSSRMR*SCERRASQPCR
Trigger: GCGGCAGGGCTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGGAGAAGGGCAAGTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681640.1
CDS GCA 72 bp CAGCTCGGTACCTTCTCCAGAAGCAGCCGTATGAGGTaGTCATGCGAGCGGCGGGCCTCACAGCCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: QLGTFSRSSRMR*SCERRASQPCR
Trigger: GCGGCAGGGCTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGGAGAAGGTACCGAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680824.1
ENST00000681341.1
CDS GCA 72 bp AGAGCGAGACTCTTCTCCAGAAGCAGCCGTATGAGGTaGTCATGCGAGCGGCGGGCCTCACAGCCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: RARLFSRSSRMR*SCERRASQPCR
Trigger: GCGGCAGGGCTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGGAGAAGAGTCTCGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000681948.1
CDS GCA 72 bp AGGCAGGCGAATGGCGTGAACCCGGGAGGCGGAGGCTaGAGTGAGCCGAGATCGTCACACTGCATTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RQANGVNPGGGG*SEPRSSHCIPA
Trigger: GGCTGGAATGCAGTGTGACGATCTCGGCTCACTGCAGCCTCCGCCTCCCGGGTTCACGCCATTCGCCTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358971.7
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
ENST00000681948.1
CDS TCA 72 bp ACCGACAGCTCGGTACCTTCTCCAGAAGCAGCCGTATaGGGTGCTCATGCGAGCGGCGGGCCTCACAGCCCT +
Preference number: 6 (lower is better)
Translates to: TDSSVPSPEAAV*GAHASGGPHSP
Trigger: AGGGCTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGGAGAAGGTACCGAGCTGTCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680824.1
ENST00000681341.1
CDS GCA 72 bp CTAGCTCCACACGCCAGACACACGACGGAACCAGAATaGAACTCGCCGCCTGGACGGTACGGCAGCGCCTTG +
Preference number: 6 (lower is better)
Translates to: LAPHARHTTEPE*NSPPGRYGSAL
Trigger: CAAGGCGCTGCCGTACCGTCCAGGCGGCGAGTTGCATTCTGGTTCCGTCGTGTGTCTGGCGTGTGGAGCTAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680581.1
ENST00000681948.1
CDS TCA 72 bp GCGAAAGAGCGAGACTCTTCTCCAGAAGCAGCCGTATaGGGTGCTCATGCGAGCGGCGGGCCTCACAGCCCT +
Preference number: 6 (lower is better)
Translates to: AKERDSSPEAAV*GAHASGGPHSP
Trigger: AGGGCTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGGAGAAGAGTCTCGCTCTTTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000681948.1
CDS TCA 72 bp TCTCTGGACACTTGCCCTTCTCCAGAAGCAGCCGTATaGGGTGCTCATGCGAGCGGCGGGCCTCACAGCCCT +
Preference number: 6 (lower is better)
Translates to: SLDTCPSPEAAV*GAHASGGPHSP
Trigger: AGGGCTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGGAGAAGGGCAAGTGTCCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382103.7
ENST00000680581.1
ENST00000681640.1
CDS CAA 90 bp ACAGACCGCAGTCGGTCAGCTAGGGCAAGCCAAGCTGAGACAGACTaGGGACTAGTCTCAAGCAGCGAAGAGCTGCCGGTGAGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: TDRSRSARASQAETD*GLVSSSEELPVRQH
Trigger: GTGCTGCCTCACCGGCAGCTCTTCGCTGCTTGAGACTAGTCCCAAGTCTGTCTCAGCTTGGCTTGCCCTAGCTGACCGACTGCGGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS TCA 72 bp AATGCCATGAATGAACCTTCTCCAGAAGCAGCCGTATaGGGTGCTCATGCGAGCGGCGGGCCTCACAGCCCT +
Preference number: 6 (lower is better)
Translates to: NAMNEPSPEAAV*GAHASGGPHSP
Trigger: AGGGCTGTGAGGCCCGCCGCTCGCATGAGCACCTCATACGGCTGCTTCTGGAGAAGGTTCATTCATGGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514585.5
CDS CCA 72 bp TGCAGTGAGCCGAGATCGTCACACTGCATTCCAGCCTaGGCGAAAGAGCGAGACTCTTCTCCAGAAGCAGCC +
Preference number: 6 (lower is better)
Translates to: CSEPRSSHCIPA*AKERDSSPEAA
Trigger: GGCTGCTTCTGGAGAAGAGTCTCGCTCTTTCGCCCAGGCTGGAATGCAGTGTGACGATCTCGGCTCACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358971.7
ENST00000681948.1
CDS CAA 72 bp AGTCGGTCAGCTAGGGCAAGCCAAGCTGAGACAGACTaGGGACTAGTCTCAAGCAGCGAAGAGCTGCCGGTG +
Preference number: 6 (lower is better)
Translates to: SRSARASQAETD*GLVSSSEELPV
Trigger: CACCGGCAGCTCTTCGCTGCTTGAGACTAGTCCCAAGTCTGTCTCAGCTTGGCTTGCCCTAGCTGACCGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS CAA 72 bp CCCCCTCCTAACAACACCATTTGGCTTTCACTGGCTTaGGCAAGGCTGAGAAGGCACAGACCGCAGTCGGTC +
Preference number: 6 (lower is better)
Translates to: PPPNNTIWLSLA*ARLRRHRPQSV
Trigger: GACCGACTGCGGTCTGTGCCTTCTCAGCCTTGCCAAAGCCAGTGAAAGCCAAATGGTGTTGTTAGGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS TCA 72 bp ACAACACCATTTGGCTTTCACTGGCTTTGGCAAGGCTaGGAAGGCACAGACCGCAGTCGGTCAGCTAGGGCA +
Preference number: 6 (lower is better)
Translates to: TTPFGFHWLWQG*EGTDRSRSARA
Trigger: TGCCCTAGCTGACCGACTGCGGTCTGTGCCTTCTCAGCCTTGCCAAAGCCAGTGAAAGCCAAATGGTGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS CCA 72 bp AAAGAGTTCAAGTGTACTTTCATCCCAGCCATTCTCTaGACACTTGCCCGGGTGTGGTGGCGGGCGCCTGTA +
Preference number: 6 (lower is better)
Translates to: KEFKCTFIPAIL*TLARVWWRAPV
Trigger: TACAGGCGCCCGCCACCACACCCGGGCAAGTGTCCAGAGAATGGCTGGGATGAAAGTACACTTGAACTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358971.7
CDS CCA 72 bp AAGATGCTTCAAACCAGGGCGTTACGACTGGGGCGGTaGGACGTGGAGAAGGGCGGTAGTTGTCAAACTTCA +
Preference number: 6 (lower is better)
Translates to: KMLQTRALRLGR*DVEKGGSCQTS
Trigger: TGAAGTTTGACAACTACCGCCCTTCTCCACGTCCCACCGCCCCAGTCGTAACGCCCTGGTTTGAAGCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS CCA 72 bp TTCTCTGGACACTTGCCGCCTGTAATCCGAGCACTTTaGAAGGCCAAGAATGGCCGATCACTTGAAGTCAGG +
Preference number: 6 (lower is better)
Translates to: FSGHLPPVIRAL*KAKNGRSLEVR
Trigger: CCTGACTTCAAGTGATCGGCCATTCTTGGCCTTCCAAAGTGCTCGGATTACAGGCGGCAAGTGTCCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681948.1
CDS GCA 72 bp AGAAACAGGACAAAGAGCAAGAAAACAGAGACGGTCTaGATCGACTCAGGTGATAAAGGGAGCTCCCCACCC +
Preference number: 6 (lower is better)
Translates to: RNRTKSKKTETV*IDSGDKGSSPP
Trigger: GGGTGGGGAGCTCCCTTTATCACCTGAGTCGATGCAGACCGTCTCTGTTTTCTTGCTCTTTGTCCTGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000681166.1
ENST00000681640.1
CDS TCA 72 bp ATTAAAATACATGAACGCTGGCAGGAGGGAGACCTGTaGAGTTCCGCGGAAAGCTCGTGGTTCGAGTTAGCA +
Preference number: 6 (lower is better)
Translates to: IKIHERWQEGDL*SSAESSWFELA
Trigger: TGCTAACTCGAACCACGAGCTTTCCGCGGAACTTCACAGGTCTCCCTCCTGCCAGCGTTCATGTATTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS CAA 90 bp CGAGTTAGCATACAGTCTACAAACACCATTATGTGTTCTGAGTCGTaGAGGGTTGGTGAAAGATGGAGGTGCGAACTTTGCCCTTTCCGC +
Preference number: 6 (lower is better)
Translates to: RVSIQSTNTIMCSES*RVGERWRCELCPFR
Trigger: GCGGAAAGGGCAAAGTTCGCACCTCCATCTTTCACCAACCCTCAACGACTCAGAACACATAATGGTGTTTGTAGACTGTATGCTAACTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS CCA 72 bp AAAGAGTTCAAGTGTACTTTCATCCCAGCCATTCTCTaGACACTTGCCGCCTGTAATCCGAGCACTTTGGAA +
Preference number: 6 (lower is better)
Translates to: KEFKCTFIPAIL*TLAACNPSTLE
Trigger: TTCCAAAGTGCTCGGATTACAGGCGGCAAGTGTCCAGAGAATGGCTGGGATGAAAGTACACTTGAACTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681948.1
CDS TCA 72 bp TACAGTCTACAAACACCATTATGTGTTCTGAGTCGTTaGGGGTTGGTGAAAGATGGAGGTGCGAACTTTGCC +
Preference number: 6 (lower is better)
Translates to: YSLQTPLCVLSR*GLVKDGGANFA
Trigger: GGCAAAGTTCGCACCTCCATCTTTCACCAACCCTCAACGACTCAGAACACATAATGGTGTTTGTAGACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS TCA 72 bp GCAAACCTTCAGATGACTAAACTCTCAGCCAGTATCTaGCTGCAACTACATGACAGACCCAAAGCAATACTC +
Preference number: 6 (lower is better)
Translates to: ANLQMTKLSASI*LQLHDRPKAIL
Trigger: GAGTATTGCTTTGGGTCTGTCATGTAGTTGCAGTCAGATACTGGCTGAGAGTTTAGTCATCTGAAGGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681071.1
CDS CAA 72 bp ATACAGTCTACAAACACCATTATGTGTTCTGAGTCGTaGAGGGTTGGTGAAAGATGGAGGTGCGAACTTTGC +
Preference number: 6 (lower is better)
Translates to: IQSTNTIMCSES*RVGERWRCELC
Trigger: GCAAAGTTCGCACCTCCATCTTTCACCAACCCTCAACGACTCAGAACACATAATGGTGTTTGTAGACTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
CDS CCA 72 bp AATGGAAATGATCATTCTGAGGCTGTGTGGGTAAACTaGATTGCATACATAGCACCACTCGTAGCTACCATT +
Preference number: 6 (lower is better)
Translates to: NGNDHSEAVWVN*IAYIAPLVATI
Trigger: AATGGTAGCTACGAGTGGTGCTATGTATGCAATCCAGTTTACCCACACAGCCTCAGAATGATCATTTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681374.1
CDS CCA 72 bp GCATATAGAAATGGAAATGATCATTCTGAGGCTGTGTaGGTAAACTGGATTGCATACATAGCACCACTCGTA +
Preference number: 6 (lower is better)
Translates to: AYRNGNDHSEAV*VNWIAYIAPLV
Trigger: TACGAGTGGTGCTATGTATGCAATCCAGTTTACCCACACAGCCTCAGAATGATCATTTCCATTTCTATATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681374.1
CDS CAA 72 bp CCTTCCCTTTCTCCCACACCACAATTGCCTAAGAAATaGTTGCTGTCCATGATTGCAAGTTCATGTAAAAAG +
Preference number: 6 (lower is better)
Translates to: PSLSPTPQLPKK*LLSMIASSCKK
Trigger: CTTTTTACATGAACTTGCAATCATGGACAGCAACAATTTCTTAGGCAATTGTGGTGTGGGAGAAAGGGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000358971.7
ENST00000382103.7
ENST00000680581.1
ENST00000680824.1
ENST00000681166.1
ENST00000681341.1
ENST00000681640.1
ENST00000681948.1
CDS CAA 72 bp TTCGCAGGTATAGTTCAGGATATACTTGGGGGACTATaGTTGAGGAAAGGTATTTTACTGGAGTTAAGTTTG +
Preference number: 6 (lower is better)
Translates to: FAGIVQDILGGL*LRKGILLELSL
Trigger: CAAACTTAACTCCAGTAAAATACCTTTCCTCAACAATAGTCCCCCAAGTATATCCTGAACTATACCTGCGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515272.1
CDS CCA 72 bp ACAATATTCACAAATCATTTACCTATCAGGCACCCTTaGAGCAAAACAGGATGTAGTAGAATGAATACACAG +
Preference number: 6 (lower is better)
Translates to: TIFTNHLPIRHP*SKTGCSRMNTQ
Trigger: CTGTGTATTCATTCTACTACATCCTGTTTTGCTCCAAGGGTGCCTGATAGGTAAATGATTTGTGAATATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681166.1
ENST00000681640.1