Pregenerated sensors for SEPHS2 (Homo sapiens)
Ensembl gene IDs: ENSG00000179918Ensembl transcript IDs: ENST00000478753.5
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCAGCCGGAACCACTATaGAGGCAGCCTTCTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LLWPRNAYKDCFRWADSNQPEPL*RQPSLE Trigger: TTCCAAAGAAGGCTGCCTGCATAGTGGTTCCGGCTG...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| 3UTR-3UTR TCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCTTGAGAACCATCCGTaGTTGTGGACAATGGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: LLWPRNAYKDCFRWADSNLENHP*LWTMAL Trigger: TAGAGCCATTGTCCACAATCACGGATGGTTCTCAAG...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| 3UTR-3UTR TCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCTTACAATCAACTCTTaGGAACCATCCGTGATTGTG | + |
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Preference number: 2 (lower is better) Translates to: LLWPRNAYKDCFRWADSNLTINS*EPSVIV Trigger: CACAATCACGGATGGTTCTCAAGAGTTGATTGTAAG...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| 3UTR-3UTR CCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATGCAGGCAGCCTTCTTTaGAAATTTCTTACAATCAAC | + |
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Preference number: 2 (lower is better) Translates to: LLWPRNAYKDCFRWADSNAGSLL*KFLTIN Trigger: GTTGATTGTAAGAAATTTCCAAAGAAGGCTGCCTGC...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| 3UTR-3UTR CAA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATTCTTACAATCAACTCTaGAGAACCATCCGTGATTGT | + |
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Preference number: 3 (lower is better) Translates to: LLWPRNAYKDCFRWADSNSYNQL*RTIRDC Trigger: ACAATCACGGATGGTTCTCAAGAGTTGATTGTAAGA...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| 3UTR-3UTR CAA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATTGCAGGCAGCCTTCTTaGGAAATTTCTTACAATCAA | + |
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Preference number: 3 (lower is better) Translates to: LLWPRNAYKDCFRWADSNCRQPS*EISYNQ Trigger: TTGATTGTAAGAAATTTCCAAAGAAGGCTGCCTGCA...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR TCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATGCCGCCAGCTCGGGCTaGGGCCCAACGCCTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNAASSG*GPTPGA Trigger: AGCCCCAGGCGTTGGGCCTCAGCCCGAGCTGGCGGC...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR GCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATGGAGCCTTCCGCCGCTaGCATCGCCTCTCCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNGAFRR*HRLSAG Trigger: GCCTGCGGAGAGGCGATGGCAGCGGCGGAAGGCTCC...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR CCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCCGAGGCTTCCGCCATaGCGCCTGCCCGGCAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNPRLPP*RLPGRE Trigger: TTCCCTGCCGGGCAGGCGCCATGGCGGAAGCCTCGG...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR CCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATTGGGACGCCTCTTCCTaGCCACCCACCAGGCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNWDASS*PPTRPR Trigger: CCGGGGCCTGGTGGGTGGCCAGGAAGAGGCGTCCCA...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR GCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATTTCCGCCATGGCGCCTaGCCGGCAGGGAAGCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNFRHGA*PAGKRE Trigger: CTCTCGCTTCCCTGCCGGGCAGGCGCCATGGCGGAA...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR TCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCGTGCCTCAGGGGGATaGCGCAGGAGTCCATCCCGA | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNRASGG*RRSPSR Trigger: TCGGGATGGACTCCTGCGTCATCCCCCTGAGGCACG...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR GCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATTTGCCCACCGGTCACTaGCGTCCCTCCTTCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNLPTGH*RPSFLS Trigger: GCTGAGGAAGGAGGGACGGCAGTGACCGGTGGGCAA...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR GCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATGGGTTGACCACCGTTTaGCCACCGGTCACTGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNGLTTV*PPVTAV Trigger: GACGGCAGTGACCGGTGGGCAAACGGTGGTCAACCC...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR TCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCTCGCGGCTTGTCAATaGTCCGGGCCGTTCGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNLAACQ*SGPFGF Trigger: GAAACCGAACGGCCCGGATCATTGACAAGCCGCGAG...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR GCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATAGGAGTCCATCCCGATaGCCAGGGCTGGAAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNRSPSR*PGLERW Trigger: CCACCTTTCCAGCCCTGGGCATCGGGATGGACTCCT...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR GCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCTGGGCTCTGAGGCTTaGTCTGCCTCTCCCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNLGSEA*SASPSP Trigger: AGGACTGGGAGAGGCAGAGCAAGCCTCAGAGCCCAG...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR TCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATACGATCCACGCTTGGTaGCCCTCTCCGTACTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNTIHAW*PSPYLE Trigger: CTCCAAGTACGGAGAGGGTCACCAAGCGTGGATCGT...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR CCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCAAGAACAGCAGCTGTaGCCCCACGAGGCAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNQEQQL*PHEAGL Trigger: AAGTCCTGCCTCGTGGGGCCACAGCTGCTGTTCTTG...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR CCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATGGGTTCCTAACGGTTTaGTTAACACCAGCACGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNGFLTV*LTPARP Trigger: GGGACGTGCTGGTGTTAACCAAACCGTTAGGAACCC...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR TCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCTCAGAGGAGGCATTTaGACTGTCAGGAGCAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNLRGGI*TVRSKN Trigger: GTTCTTGCTCCTGACAGTTCAAATGCCTCCTCTGAG...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR CCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATGCCTTTGACCATGAGTaGCGTTACCTTTTCGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNAFDHE*RYLFAF Trigger: GAACGCGAAAAGGTAACGCCACTCATGGTCAAAGGC...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR TCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCGCTGTCCGGCATTATaGACTCATTTGGTTGGCATA | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNRCPAL*THLVGI Trigger: TATGCCAACCAAATGAGTTCATAATGCCGGACAGCG...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR GCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATAAACAGAGGTATTTTTaGTCCTCTTCTACCCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNKQRYF*SSSTQV Trigger: CACTTGGGTAGAAGAGGAGCAAAAATACCTCTGTTT...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR GCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATAAATCACCAGGAATCTaGCGCAAAAGACTTAACATC | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNKSPGI*RKRLNI Trigger: GATGTTAAGTCTTTTGCGGCAGATTCCTGGTGATTT...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR CCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATATGAACTCATTTGGTTaGCATACTACAGTGGCAACT | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNMNSFG*HTTVAT Trigger: AGTTGCCACTGTAGTATGCCAACCAAATGAGTTCAT...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR CCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATCATTATGAACTCATTTaGTTGGCATACTACAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNHYELI*LAYYSG Trigger: GCCACTGTAGTATGCCAACCAAATGAGTTCATAATG...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR CCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATAAAGACTGCTTTAGATaGGCTGATTCCAATCACCTA | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNKDCFR*ADSNHL Trigger: TAGGTGATTGGAATCAGCCCATCTAAAGCAGTCTTT...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR GCA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATAATGCATATAAAGACTaGTTTAGATGGGCTGATTCC | + |
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Preference number: 4 (lower is better) Translates to: LLWPRNAYKDCFRWADSNNAYKD*FRWADS Trigger: GGAATCAGCCCATCTAAAGCAGTCTTTATATGCATT...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS GCA 90 bp | CCGGCCCAGAGTCAAGCCCGCCGGGCCCGAGGAGCCTTCCGCCGCTaGCATCGCCTCTCCGCAGGCGCCCGTCGCCGAGGCTTCCGCCAT | + |
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Preference number: 5 (lower is better) Translates to: PAQSQARRARGAFRR*HRLSAGARRRGFRH Trigger: ATGGCGGAAGCCTCGGCGACGGGCGCCTGCGGAGAGGCGATGGCAGCGGCGGAAGGCTCCTCGGGCCCGGCGGGCTTGACTCTGGGCCGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS TCA 90 bp | AACTTCTGTTCTTTCATCTCACGAGCTAGGCTCAGAGGAGGCATTTaGACTGTCAGGAGCAAGAACAGCAGCTGTGGCCCCACGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: NFCSFISRARLRGGI*TVRSKNSSCGPTRQ Trigger: CTGCCTCGTGGGGCCACAGCTGCTGTTCTTGCTCCTGACAGTTCAAATGCCTCCTCTGAGCCTAGCTCGTGAGATGAAAGAACAGAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR CAA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATAGGGTTGACCACCGTTaGCCCACCGGTCACTGCCGT | + |
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Preference number: 5 (lower is better) Translates to: LLWPRNAYKDCFRWADSNRVDHR*PTGHCR Trigger: ACGGCAGTGACCGGTGGGCAAACGGTGGTCAACCCT...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR CAA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATATTATAATCCAAGGGTaGACCACCGTTTGCCCACCG | + |
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Preference number: 5 (lower is better) Translates to: LLWPRNAYKDCFRWADSNIIIQG*TTVCPP Trigger: CGGTGGGCAAACGGTGGTCAACCCTTGGATTATAAT...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR CAA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATTATGAACTCATTTGGTaGGCATACTACAGTGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: LLWPRNAYKDCFRWADSNYELIW*AYYSGN Trigger: GTTGCCACTGTAGTATGCCAACCAAATGAGTTCATA...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS-3UTR CAA 90 bp | TTACTCTGGCCTCGGAATGCATATAAAGACTGCTTTAGATGGGCTGATTCCAATAAAACAGAGGTATTTTaGCTCCTCTTCTACCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: LLWPRNAYKDCFRWADSNKTEVF*LLFYPS Trigger: ACTTGGGTAGAAGAGGAGCAAAAATACCTCTGTTTT...ATTGGAATCAGCCCATCTAAAGCAGTCTTTATATGCATTCCGAGGCCAGAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS GCA 72 bp | AGTCAAGCCCGCCGGGCCCGAGGAGCCTTCCGCCGCTaGCATCGCCTCTCCGCAGGCGCCCGTCGCCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: SQARRARGAFRR*HRLSAGARRRG Trigger: GCCTCGGCGACGGGCGCCTGCGGAGAGGCGATGGCAGCGGCGGAAGGCTCCTCGGGCCCGGCGGGCTTGACT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS GCA 72 bp | ACTCCACCGATTATAATCCAAGGGTTGACCACCGTTTaGCCACCGGTCACTGCCGTCCCTCCTTCCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TPPIIIQGLTTV*PPVTAVPPSSA Trigger: GGCTGAGGAAGGAGGGACGGCAGTGACCGGTGGGCAAACGGTGGTCAACCCTTGGATTATAATCGGTGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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| CDS CAA 72 bp | AACTCCACCGATTATAATCCAAGGGTTGACCACCGTTaGCCCACCGGTCACTGCCGTCCCTCCTTCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: NSTDYNPRVDHR*PTGHCRPSFLS Trigger: GCTGAGGAAGGAGGGACGGCAGTGACCGGTGGGCAAACGGTGGTCAACCCTTGGATTATAATCGGTGGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478753.5 |
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