Pregenerated sensors for SEPHS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000086475Ensembl transcript IDs: ENST00000413411.5, ENST00000494329.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTTAACTGTGGCAAGAGGGCCAGCCTGCAGGTTCACATGACACCGTaGCACCTTGAACAGCAAATCCCAAAGGTTCTTCTAGGACTCAGC | + |
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Preference number: 5 (lower is better) Translates to: FNCGKRASLQVHMTP*HLEQQIPKVLLGLS Trigger: GCTGAGTCCTAGAAGAACCTTTGGGATTTGCTGTTCAAGGTGGCACGGTGTCATGTGAACCTGCAGGCTGGCCCTCTTGCCACAGTTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494329.1 |
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| CDS TCA 90 bp | GAAAAGAATTCCCACTGGGACCTGCCAGCGAATCAAGTGAATACATaGCAGCGAAAAGTCAATGTGACAAGGGCTGAAATCATCAAGACC | + |
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Preference number: 5 (lower is better) Translates to: EKNSHWDLPANQVNT*QRKVNVTRAEIIKT Trigger: GGTCTTGATGATTTCAGCCCTTGTCACATTGACTTTTCGCTGTCATGTATTCACTTGATTCGCTGGCAGGTCCCAGTGGGAATTCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494329.1 |
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| CDS TCA 90 bp | TTCTTTATGGATCCACCTGGGTGTCACCAAAACACAAAGATGCCATaGAAAGAATTCCCACTGGGACCTGCCAGCGAATCAAGTGAATAC | + |
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Preference number: 5 (lower is better) Translates to: FFMDPPGCHQNTKMP*KEFPLGPASESSEY Trigger: GTATTCACTTGATTCGCTGGCAGGTCCCAGTGGGAATTCTTTTCATGGCATCTTTGTGTTTTGGTGACACCCAGGTGGATCCATAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494329.1 |
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| CDS CCA 72 bp | TCTTTATGGATCCACCTCCCCGCCGGCCCCGCACAATaGGGCGCGCTCTCCAGGACGCCCGCGTCGGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: SLWIHLPAGPAQ*GALSRTPASEA Trigger: CGCCTCCGACGCGGGCGTCCTGGAGAGCGCGCCCCATTGTGCGGGGCCGGCGGGGAGGTGGATCCATAAAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413411.5 |
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| CDS TCA 72 bp | GGCCAGCCTGCAGGTTCACATGACACCGTGCCACCTTaGACAGCAAATCCCAAAGGTTCTTCTAGGACTCAG | + |
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Preference number: 6 (lower is better) Translates to: GQPAGSHDTVPP*TANPKGSSRTQ Trigger: CTGAGTCCTAGAAGAACCTTTGGGATTTGCTGTTCAAGGTGGCACGGTGTCATGTGAACCTGCAGGCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494329.1 |
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| CDS GCA 72 bp | GGCAAGAGGGCCAGCCTGCAGGTTCACATGACACCGTaGCACCTTGAACAGCAAATCCCAAAGGTTCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: GKRASLQVHMTP*HLEQQIPKVLL Trigger: TAGAAGAACCTTTGGGATTTGCTGTTCAAGGTGGCACGGTGTCATGTGAACCTGCAGGCTGGCCCTCTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494329.1 |
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| CDS TCA 72 bp | GATCCACCTGGGTGTCACCAAAACACAAAGATGCCATaGAAAGAATTCCCACTGGGACCTGCCAGCGAATCA | + |
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Preference number: 6 (lower is better) Translates to: DPPGCHQNTKMP*KEFPLGPASES Trigger: TGATTCGCTGGCAGGTCCCAGTGGGAATTCTTTTCATGGCATCTTTGTGTTTTGGTGACACCCAGGTGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494329.1 |
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| CDS TCA 72 bp | ACGGGACTGCGTCAGCACAGACATCTATGTAAAATCTaGCATCTGGACTGTGGTTTTAACTGTGGCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: TGLRQHRHLCKI*HLDCGFNCGKR Trigger: CCTCTTGCCACAGTTAAAACCACAGTCCAGATGTCAGATTTTACATAGATGTCTGTGCTGACGCAGTCCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494329.1 |
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| CDS TCA 72 bp | GAATACATGACAGCGAAAAGTCAATGTGACAAGGGCTaGAATCATCAAGACCACTTATATTCACCACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: EYMTAKSQCDKG*NHQDHLYSPQQ Trigger: CTGCTGTGGTGAATATAAGTGGTCTTGATGATTTCAGCCCTTGTCACATTGACTTTTCGCTGTCATGTATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494329.1 |
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| CDS TCA 72 bp | CATCAAGACCACTTATATTCACCACAGCAGTGCATATaGCAAAATAGATCTTTTCATAACGGGACTGCGTCA | + |
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Preference number: 6 (lower is better) Translates to: HQDHLYSPQQCI*QNRSFHNGTAS Trigger: TGACGCAGTCCCGTTATGAAAAGATCTATTTTGTCATATGCACTGCTGTGGTGAATATAAGTGGTCTTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494329.1 |
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