Pregenerated sensors for SENP8 (Homo sapiens)
Ensembl gene IDs: ENSG00000166192Ensembl transcript IDs: ENST00000340912.6, ENST00000542035.2, ENST00000564082.1, ENST00000564863.5, ENST00000567794.5
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATaGGGAAGGGCAGAAAGAGGAGCCTTCAAAAGTCGCAAATATACT | + |
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Preference number: 1 (lower is better) Translates to: LGIFPQALRLQPSNK*GRAERGAFKSRKYT Trigger: AGTATATTTGCGACTTTTGAAGGCTCCTCTTTCTGCCCTTCCCCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| 3UTR GCA 90 bp | CTTCTCTTGCTGTCCCTCCCTCTGTATTTCACCTCTATGGATGACTaGCAGTTCCTAATCTTTTTCCTAGCCCCATCTTCCATTAGGACT | + |
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Preference number: 1 (lower is better) Translates to: LLLLSLPLYFTSMDD*QFLIFFLAPSSIRT Trigger: AGTCCTAATGGAAGATGGGGCTAGGAAAAAGATTAGGAACTGGCAGTCATCCATAGAGGTGAAATACAGAGGGAGGGACAGCAAGAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR GCA 90 bp | TATCTACACTTGTGGCCTATCATCAGTGACCTTTGTCACTTCTCTTaGTGTCCCTCCCTCTGTATTTCACCTCTATGGATGACTGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: YLHLWPIISDLCHFS*CPSLCISPLWMTAS Trigger: ACTGGCAGTCATCCATAGAGGTGAAATACAGAGGGAGGGACAGCAAGAGAAGTGACAAAGGTCACTGATGATAGGCCACAAGTGTAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR TCA 90 bp | AACATTGTTTTCTTATCTTTATCTACACTTGTGGCCTATCATCAGTaGCCTTTGTCACTTCTCTTGCTGTCCCTCCCTCTGTATTTCACC | + |
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Preference number: 1 (lower is better) Translates to: NIVFLSLSTLVAYHQ*PLSLLLLSLPLYFT Trigger: GGTGAAATACAGAGGGAGGGACAGCAAGAGAAGTGACAAAGGTCACTGATGATAGGCCACAAGTGTAGATAAAGATAAGAAAACAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGCAGCCATCCAACAAATaGGGAAGGGCAGAAAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: RKKSIKLSSTRHLPSGTEQPSNK*GRAERG Trigger: TCCTCTTTCTGCCCTTCCCCATTTGTTGGATGGCTG...CTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTGAGACACGGGTTGGACAAGTGTGACTATACTTACCGGGCAATACAACAGAATGAAGTTAGGCCTTaGTCTGCTTCCAGCCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: ILRHGLDKCDYTYRAIQQNEVRP*SASSQL Trigger: CAACTGGCTGGAAGCAGATCAAGGCCTAACTTCATT...CTGTTGTATTGCCCGGTAAGTATAGTCACACTTGTCCAACCCGTGTCTCAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR-3UTR CCA 90 bp | AAGTTACTTTCTCTGTGGTCACTGAGTGGTGAGGTTATTTTGGGCCATGAGGGCACACATCAGTGCTTCTaGAGGGATAGTATTTCGTTC | + |
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Preference number: 2 (lower is better) Translates to: KLLSLWSLSGEVILGHEGTHQCF*RDSISF Trigger: GAACGAAATACTATCCCTCCAGAAGCACTGATGTGT...GCCCTCATGGCCCAAAATAACCTCACCACTCAGTGACCACAGAGAAAGTAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR-3UTR TCA 90 bp | TTCAAGCATTCCAGGAATCAGATGGAGGAAGATAGGGTAACATCATCTTTATCATCTTCCCTCAGGCACTaGGATTGCAGCCATCCAACA | + |
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Preference number: 2 (lower is better) Translates to: FKHSRNQMEEDRVTSSLSSSLRH*DCSHPT Trigger: TGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGA...TGATAAAGATGATGTTACCCTATCTTCCTCCATCTGATTCCTGGAATGCTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCCCTCTGTATTTCACCTCTATGGATGACTGCCAGTTCCTAATCTTTTTCAAAGCCTGTGCATGGTaGATGGAAGAGATGTCACAT | + |
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Preference number: 2 (lower is better) Translates to: SLPLYFTSMDDCQFLIFFKACAW*MEEMSH Trigger: ATGTGACATCTCTTCCATTCACCATGCACAGGCTTT...GAAAAAGATTAGGAACTGGCAGTCATCCATAGAGGTGAAATACAGAGGGAGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR-3UTR CCA 90 bp | ATATTGAGACACGGGTTGGACAAGTGTGACTATACTTACCGGGCAATACAACAGCCTGTGCATGGTGAATaGAAGAGATGTCACATAAAA | + |
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Preference number: 2 (lower is better) Translates to: ILRHGLDKCDYTYRAIQQPVHGE*KRCHIK Trigger: TTTTATGTGACATCTCTTCCATTCACCATGCACAGG...CTGTTGTATTGCCCGGTAAGTATAGTCACACTTGTCCAACCCGTGTCTCAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR-3UTR TCA 90 bp | TTCAAGCATTCCAGGAATCAGATGGAGGAAGATAGGGTAACATCATCTTTATCACTGCTTCCAGCCAGTTaGTCTCTTAATTATGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: FKHSRNQMEEDRVTSSLSLLPAS*SLNYVG Trigger: GCCTACATAATTAAGAGATCAACTGGCTGGAAGCAG...TGATAAAGATGATGTTACCCTATCTTCCTCCATCTGATTCCTGGAATGCTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCCCTCTGTATTTCACCTCTATGGATGACTGCCAGTTCCTAATCTTTTTCAATAAGTTTCATGGCTaGAGCTCATCTTTGGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: SLPLYFTSMDDCQFLIFFNKFHG*SSSLVF Trigger: GAAAACCAAAGATGAGCTTCAGCCATGAAACTTATT...GAAAAAGATTAGGAACTGGCAGTCATCCATAGAGGTGAAATACAGAGGGAGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR-3UTR TCA 90 bp | GGACCAGCGCTTGTGAACTTCAACATATACCTTGCCAAATGGTTGAAATATTTGTTTCACCTCTATGGATaGCTGCCAGTTCCTAATCTT | + |
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Preference number: 2 (lower is better) Translates to: GPALVNFNIYLAKWLKYLFHLYG*LPVPNL Trigger: AAGATTAGGAACTGGCAGTCATCCATAGAGGTGAAA...CAAATATTTCAACCATTTGGCAAGGTATATGTTGAAGTTCACAAGCGCTGGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR-3UTR GCA 90 bp | TATGTGGTCAAGCAGGTGTGTAACTTACCGGGTACTATAGTATCCAGTGAAATATTTCACAGAACATATTaGTCCCCAGTCAGGGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: YVVKQVCNLPGTIVSSEIFHRTY*SPVRVK Trigger: TTTAACCCTGACTGGGGAGCAATATGTTCTGTGAAA...TATTTCACTGGATACTATAGTACCCGGTAAGTTACACACCTGCTTGACCACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR CAA 90 bp | TTAGGACCAGCGCTTGTGAACTTCAACATATACCTTGCCAAATGGTaGAAATATTTGTGTTTTAAACACTATTACATAGGAAACCCACTG | + |
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Preference number: 2 (lower is better) Translates to: LGPALVNFNIYLAKW*KYLCFKHYYIGNPL Trigger: CAGTGGGTTTCCTATGTAATAGTGTTTAAAACACAAATATTTCAACCATTTGGCAAGGTATATGTTGAAGTTCACAAGCGCTGGTCCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR TCA 72 bp | GGCATGAGCCATTGCGCCCGGCCTGCCCCATGTAACTaGGAAATTCTACTTGGTCATTTCAATGGAATGTGT | + |
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Preference number: 3 (lower is better) Translates to: GMSHCARPAPCN*EILLGHFNGMC Trigger: ACACATTCCATTGAAATGACCAAGTAGAATTTCTCAGTTACATGGGGCAGGCCGGGCGCAATGGCTCATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR TCA 72 bp | CTTGCTGTCCCTCCCTCTGTATTTCACCTCTATGGATaGCTGCCAGTTCCTAATCTTTTTCCTAGCCCCATC | + |
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Preference number: 3 (lower is better) Translates to: LAVPPSVFHLYG*LPVPNLFPSPI Trigger: GATGGGGCTAGGAAAAAGATTAGGAACTGGCAGTCATCCATAGAGGTGAAATACAGAGGGAGGGACAGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR GCA 72 bp | CTGTCCCTCCCTCTGTATTTCACCTCTATGGATGACTaGCAGTTCCTAATCTTTTTCCTAGCCCCATCTTCC | + |
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Preference number: 3 (lower is better) Translates to: LSLPLYFTSMDD*QFLIFFLAPSS Trigger: GGAAGATGGGGCTAGGAAAAAGATTAGGAACTGGCAGTCATCCATAGAGGTGAAATACAGAGGGAGGGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR GCA 72 bp | TTGTGGCCTATCATCAGTGACCTTTGTCACTTCTCTTaGTGTCCCTCCCTCTGTATTTCACCTCTATGGATG | + |
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Preference number: 3 (lower is better) Translates to: LWPIISDLCHFS*CPSLCISPLWM Trigger: CATCCATAGAGGTGAAATACAGAGGGAGGGACAGCAAGAGAAGTGACAAAGGTCACTGATGATAGGCCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR TCA 72 bp | TTCTTATCTTTATCTACACTTGTGGCCTATCATCAGTaGCCTTTGTCACTTCTCTTGCTGTCCCTCCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: FLSLSTLVAYHQ*PLSLLLLSLPL Trigger: CAGAGGGAGGGACAGCAAGAGAAGTGACAAAGGTCACTGATGATAGGCCACAAGTGTAGATAAAGATAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR TCA 72 bp | TCTGAATTCCATATTGAGACACGGGTTGGACAAGTGTaGCTATACTTACCGGGCAATACAACAGGATATCTG | + |
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Preference number: 3 (lower is better) Translates to: SEFHIETRVGQV*LYLPGNTTGYL Trigger: CAGATATCCTGTTGTATTGCCCGGTAAGTATAGTCACACTTGTCCAACCCGTGTCTCAATATGGAATTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR-3UTR CAA 90 bp | TATGTGGTCAAGCAGGTGTGTAACTTACCGGGTACTATAGTATCCAGTGAAATATATCTTTATCTACACTaGTGGCCTATCATCAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: YVVKQVCNLPGTIVSSEIYLYLH*WPIISD Trigger: GTCACTGATGATAGGCCACAAGTGTAGATAAAGATA...TATTTCACTGGATACTATAGTACCCGGTAAGTTACACACCTGCTTGACCACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR TCA 72 bp | GTAGATGAGACTACTGAATCTGACAGACCCTGGATTTaGCATTCATGCTCTAACACCATAGCATGTACATTT | + |
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Preference number: 3 (lower is better) Translates to: VDETTESDRPWI*HSCSNTIACTF Trigger: AAATGTACATGCTATGGTGTTAGAGCATGAATGTCAAATCCAGGGTCTGTCAGATTCAGTAGTCTCATCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR GCA 72 bp | CAAGGTACTTGTGTAATATGTGTGCATAAAGTACCCTaGACATTACAGAGTGATAAAAAGGTTAGTTGTTGC | + |
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Preference number: 3 (lower is better) Translates to: QGTCVICVHKVP*TLQSDKKVSCC Trigger: GCAACAACTAACCTTTTTATCACTCTGTAATGTGCAGGGTACTTTATGCACACATATTACACAAGTACCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR TCA 72 bp | CTGAAACAACAGGTAACCTTGGGAAGGTATCAACTATaGATTTTAGAACCAAAGAACTTTGGATATAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: LKQQVTLGRYQL*ILEPKNFGYKE Trigger: CTCCTTATATCCAAAGTTCTTTGGTTCTAAAATTCATAGTTGATACCTTCCCAAGGTTACCTGTTGTTTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| CDS-3UTR CCA 90 bp | GGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATGGGGAAGGGCAACCAATAAACTCCAGTaGGTTCCTCCAGCTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GIFPQALRLQPSNKWGRATNKLQ*VPPAAW Trigger: CCAGGCAGCTGGAGGAACCCACTGGAGTTTATTGGT...TGCCCTTCCCCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR TCA 90 bp | TTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAGAAATTCCAGAAGCTaGACAAGAGCTGCCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: LSFPLLGIFPQALRLQPSRNSRS*TRAASG Trigger: GCCCGAGGCAGCTCTTGTTCAGCTTCTGGAATTTCT...GGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| CDS-3UTR TCA 90 bp | TTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCGGGTCCATCTTGTACTaGCGAGGGCTGCTCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: LSFPLLGIFPQALRLQPSGSILY*RGLLRN Trigger: ATTTCTGAGCAGCCCTCGTCAGTACAAGATGGACCC...GGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR GCA 90 bp | TTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATGGGGAAGGGCAGAAAGAGTGGGTTCCTCCAGCTaGCTGGTTGGAGTTATCATT | + |
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Preference number: 4 (lower is better) Translates to: FPQALRLQPSNKWGRAERVGSSS*LVGVII Trigger: AATGATAACTCCAACCAGGCAGCTGGAGGAACCCAC...TCTTTCTGCCCTTCCCCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR GCA 90 bp | GGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATGGGGAAGGGCAAGCTGGAAAAGCCTGTaGATGGTGAATGGAAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: GIFPQALRLQPSNKWGRASWKSL*MVNGRD Trigger: ATCTCTTCCATTCACCATGCACAGGCTTTTCCAGCT...TGCCCTTCCCCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR GCA 90 bp | GGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATGGGGAAGGGCAGTTTGTCTCCTTTTCTaGCTAAGAAAGCCTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: GIFPQALRLQPSNKWGRAVCLLF*LRKPPV Trigger: AACTGGAGGCTTTCTTAGGCAGAAAAGGAGACAAAC...TGCCCTTCCCCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR GCA 90 bp | TATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCATGGGGATAATGCAGAGGCAGGAACCTGGGAATTaGCCTCCGCTTCACTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: YCSPVRVKVKRSMGIMQRQEPGN*PPLHSV Trigger: TACAGAGTGAAGCGGAGGGCAATTCCCAGGTTCCTG...CCTCTGCATTATCCCCATGGAACGTTTCACTTTAACCCTGACTGGGGAGCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542035.2 |
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| CDS-3UTR CCA 90 bp | TTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCGTGGTTCAAGGAACATaGCAATCTCTGCTGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LSFPLLGIFPQALRLQPSVVQGT*QSLLGC Trigger: GCAACCCAGCAGAGATTGCCATGTTCCTTGAACCAC...GGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR CCA 90 bp | AGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGGTGGTGAGGTTATTTTaGGCCATGAGGGCTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RKKSIKLSSTRHLPSGTEVVRLF*AMRAGG Trigger: GCCCCCAGCCCTCATGGCCCAAAATAACCTCACCAC...CTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| 3UTR CAA 72 bp | TTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATaGCAGCCATCCAACAAATGGGGAAGGGCAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: FPLLGIFPQALR*QPSNKWGRAER Trigger: TCTTTCTGCCCTTCCCCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR TCA 90 bp | TTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATGGGGAAGGGCAGAAAGAAAAGCCTGTGCATGGTaGATGGAAGAGATGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: FPQALRLQPSNKWGRAERKACAW*MEEMSH Trigger: ATGTGACATCTCTTCCATTCACCATGCACAGGCTTT...TCTTTCTGCCCTTCCCCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR GCA 90 bp | GGACCAGCGCTTGTGAACTTCAACATATACCTTGCCAAATGGTTGAAATATTTGAAGCTGAACAAGAGCTaGCTCGGGCCTCACCACCCC | + |
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Preference number: 4 (lower is better) Translates to: GPALVNFNIYLAKWLKYLKLNKS*LGPHHP Trigger: GGGGTGGTGAGGCCCGAGGCAGCTCTTGTTCAGCTT...CAAATATTTCAACCATTTGGCAAGGTATATGTTGAAGTTCACAAGCGCTGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| CDS-3UTR GCA 90 bp | TTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCGAACATGGCAATCTCTaGTGGGTTGCTAGTGCACTT | + |
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Preference number: 4 (lower is better) Translates to: LSFPLLGIFPQALRLQPSEHGNL*WVASAL Trigger: AAGTGCACTAGCAACCCAGCAGAGATTGCCATGTTC...GGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR GCA 90 bp | AGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCAGCCTCCAGTTTCTCTaGTACCTGCTTTGCGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SIKLSSTRHLPSGTEIAASLQFL*YLLCVN Trigger: GTTCACGCAAAGCAGGTAGCAGAGAAACTGGAGGCT...GGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR GCA 90 bp | TATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCATGGGGATAATGCAGAGGTTGCCTTCTGTCTTCTaGCTCTTGTCATGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: YCSPVRVKVKRSMGIMQRLPSVF*LLSCPP Trigger: AGGAGGGCATGACAAGAGGCAGAAGACAGAAGGCAA...CCTCTGCATTATCCCCATGGAACGTTTCACTTTAACCCTGACTGGGGAGCAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542035.2 |
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| CDS-3UTR CCA 90 bp | TATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCATGGGGATAATGCAGAGGCAGCCATCCAACAAATaGGGAAGGGCAGAAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: YCSPVRVKVKRSMGIMQRQPSNK*GRAERG Trigger: TCCTCTTTCTGCCCTTCCCCATTTGTTGGATGGCTG...CCTCTGCATTATCCCCATGGAACGTTTCACTTTAACCCTGACTGGGGAGCAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR CCA 90 bp | GGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATGGGGAAGGGCACCTGTGCATGGTGAATaGAAGAGATGTCACATAAAA | + |
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Preference number: 4 (lower is better) Translates to: GIFPQALRLQPSNKWGRAPVHGE*KRCHIK Trigger: TTTTATGTGACATCTCTTCCATTCACCATGCACAGG...TGCCCTTCCCCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR CCA 90 bp | TTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAAAAACCTTCAGGAACCTaGGAATTGCCCTCCGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FPLLGIFPQALRLQPSNKKPSGT*ELPSAS Trigger: TGAAGCGGAGGGCAATTCCCAGGTTCCTGAAGGTTT...TTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000542035.2 |
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| CDS-3UTR TCA 90 bp | ATATTGAGACACGGGTTGGACAAGTGTGACTATACTTACCGGGCAATACAACAGGGGTCCATCTTGTACTaGCGAGGGCTGCTCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: ILRHGLDKCDYTYRAIQQGSILY*RGLLRN Trigger: ATTTCTGAGCAGCCCTCGTCAGTACAAGATGGACCC...CTGTTGTATTGCCCGGTAAGTATAGTCACACTTGTCCAACCCGTGTCTCAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| CDS-3UTR TCA 90 bp | ATATTGAGACACGGGTTGGACAAGTGTGACTATACTTACCGGGCAATACAACAGCTGCTTTGCGTGAACTaGGTTGCTCCTGCTATGGGA | + |
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Preference number: 4 (lower is better) Translates to: ILRHGLDKCDYTYRAIQQLLCVN*VAPAMG Trigger: TCCCATAGCAGGAGCAACTCAGTTCACGCAAAGCAG...CTGTTGTATTGCCCGGTAAGTATAGTCACACTTGTCCAACCCGTGTCTCAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| CDS-3UTR TCA 90 bp | AGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGGCTACCTGCTTTGCGTaGACTGAGTTGCTCCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: RKKSIKLSSTRHLPSGTEATCFA*TELLLL Trigger: TAGCAGGAGCAACTCAGTTCACGCAAAGCAGGTAGC...CTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR TCA 90 bp | AGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGACCACTCTTTCCTCATaGAACCTTCAGGAACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLSFPLLGIFPQALRLQTTLSS*NLQEPG Trigger: CCCAGGTTCCTGAAGGTTTCATGAGGAAAGAGTGGT...CTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542035.2 |
||
| CDS-3UTR GCA 90 bp | TTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCTTGCGTGAACTGAGTTaGTCCTGCTATGGGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSFPLLGIFPQALRLQPSLRELS*SCYGNH Trigger: ATGATTCCCATAGCAGGAGCAACTCAGTTCACGCAA...GGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCCTCTGTATTTCACCTCTATGGATGACTGCCAGTTCCTAATCTTTTTCGCAGGGGTGAGTAGCTaGAGCAGTGATTCTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLYFTSMDDCQFLIFFAGVSS*SSDSVC Trigger: ACAGACAGAATCACTGCTGCAGCTACTCACCCCTGC...GAAAAAGATTAGGAACTGGCAGTCATCCATAGAGGTGAAATACAGAGGGAGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR GCA 90 bp | TTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATTTAGTTTCAGCTCCTaGTCACTCAGGCCTGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: FPLLGIFPQALRLQPSNKFSFSS*SLRPAM Trigger: CATAGCAGGCCTGAGTGAGCAGGAGCTGAAACTAAA...TTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR CCA 90 bp | AGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGGTGGTTCAAGGAACATaGCAATCTCTGCTGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVLSFPLLGIFPQALRLQVVQGT*QSLLGC Trigger: GCAACCCAGCAGAGATTGCCATGTTCCTTGAACCAC...CTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAAGTTCCTCCAGCTGCCTaGTTGGAGTTATCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FPLLGIFPQALRLQPSNKVPPAA*LELSLM Trigger: CATCAATGATAACTCCAACCAGGCAGCTGGAGGAAC...TTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | AGATATTTTCACAGAACATATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCAGCCTGCTGAGTAGCTaGGATTACAGGCGCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RYFHRTYCSPVRVKVKRSSLLSS*DYRRPP Trigger: AGGTGGGCGCCTGTAATCCCAGCTACTCAGCAGGCT...GGAACGTTTCACTTTAACCCTGACTGGGGAGCAATATGTTCTGTGAAAATATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR TCA 90 bp | TATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCATGGGGATAATGCAGAGGCTGCTTCCAGCCAGTTaGTCTCTTAATTATGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YCSPVRVKVKRSMGIMQRLLPAS*SLNYVG Trigger: GCCTACATAATTAAGAGATCAACTGGCTGGAAGCAG...CCTCTGCATTATCCCCATGGAACGTTTCACTTTAACCCTGACTGGGGAGCAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATTGCGTGAACTGAGTTaGTCCTGCTATGGGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPLLGIFPQALRLQPSNKLRELS*SCYGNH Trigger: ATGATTCCCATAGCAGGAGCAACTCAGTTCACGCAA...TTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAAGCAAACCCAATAATATaGTCATTGAGCCAGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPLLGIFPQALRLQPSNKANPII*SLSQLG Trigger: GCCAAGCTGGCTCAATGACCATATTATTGGGTTTGC...TTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGGTGCACTTGATGAACTaGGTGACTTCAGGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RKKSIKLSSTRHLPSGTEVHLMN*VTSGLM Trigger: CATCAGCCCTGAAGTCACCCAGTTCATCAAGTGCAC...CTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCATGGCAATCTCTGCTaGGTTGCTAGTGCACTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVLSFPLLGIFPQALRLQHGNLC*VASALD Trigger: ATCAAGTGCACTAGCAACCCAGCAGAGATTGCCATG...CTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATGGGGAAGGGCAGAAAGAGGTTGGAGTTATCATTaGTGGCTAAAAATACAACTC | + |
|
Preference number: 4 (lower is better) Translates to: FPQALRLQPSNKWGRAERGWSYH*WLKIQL Trigger: GAGTTGTATTTTTAGCCATCAATGATAACTCCAACC...TCTTTCTGCCCTTCCCCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR TCA 90 bp | TATGTGGTCAAGCAGGTGTGTAACTTACCGGGTACTATAGTATCCAGTGAAATAGCTACCTGCTTTGCGTaGACTGAGTTGCTCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: YVVKQVCNLPGTIVSSEIATCFA*TELLLL Trigger: TAGCAGGAGCAACTCAGTTCACGCAAAGCAGGTAGC...TATTTCACTGGATACTATAGTACCCGGTAAGTTACACACCTGCTTGACCACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR TCA 90 bp | ATATTGAGACACGGGTTGGACAAGTGTGACTATACTTACCGGGCAATACAACAGGTGGCCTATCATCAGTaGCCTTTGTCACTTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILRHGLDKCDYTYRAIQQVAYHQ*PLSLLL Trigger: CAAGAGAAGTGACAAAGGTCACTGATGATAGGCCAC...CTGTTGTATTGCCCGGTAAGTATAGTCACACTTGTCCAACCCGTGTCTCAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR TCA 90 bp | TACAGATCACTGCTTTTCCTCCAGAATAAGCCAATGTGGATAAGGGAGACCAAACGGGTTGGACAAGTGTaGCTATACTTACCGGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YRSLLFLQNKPMWIRETKRVGQV*LYLPGN Trigger: ATTGCCCGGTAAGTATAGTCACACTTGTCCAACCCG...TTTGGTCTCCCTTATCCACATTGGCTTATTCTGGAGGAAAAGCAGTGATCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR GCA 90 bp | ATATTGAGACACGGGTTGGACAAGTGTGACTATACTTACCGGGCAATACAACAGAGTGAGACATCTGATTaGCGCAGTAGACTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ILRHGLDKCDYTYRAIQQSETSD*RSRLSM Trigger: CATGGACAGTCTACTGCGGCAATCAGATGTCTCACT...CTGTTGTATTGCCCGGTAAGTATAGTCACACTTGTCCAACCCGTGTCTCAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR GCA 90 bp | AGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGGAACATGGCAATCTCTaGTGGGTTGCTAGTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RKKSIKLSSTRHLPSGTEEHGNL*WVASAL Trigger: AAGTGCACTAGCAACCCAGCAGAGATTGCCATGTTC...CTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | TACAGATCACTGCTTTTCCTCCAGAATAAGCCAATGTGGATAAGGGAGACCAAAGTTGGGGAGGTCCAGTaGTTCAAGGAACATGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YRSLLFLQNKPMWIRETKVGEVQ*FKEHGN Trigger: ATTGCCATGTTCCTTGAACCACTGGACCTCCCCAAC...TTTGGTCTCCCTTATCCACATTGGCTTATTCTGGAGGAAAAGCAGTGATCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | TTACTTTCTCTGTGGTCACTGAGTGGTGAGGTTATTTTGGGCCATGAGGGCTGGCCTGTGCATGGTGAATaGAAGAGATGTCACATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSLWSLSGEVILGHEGWPVHGE*KRCHIK Trigger: TTTTATGTGACATCTCTTCCATTCACCATGCACAGG...CCAGCCCTCATGGCCCAAAATAACCTCACCACTCAGTGACCACAGAGAAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCCTCTGTATTTCACCTCTATGGATGACTGCCAGTTCCTAATCTTTTTCGAGGAAGTGTGTGCATaGCTAATAGACAAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPLYFTSMDDCQFLIFFEEVCA*LIDKAE Trigger: CTCTGCCTTGTCTATTAGCCATGCACACACTTCCTC...GAAAAAGATTAGGAACTGGCAGTCATCCATAGAGGTGAAATACAGAGGGAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR CCA 90 bp | AAGTTACTTTCTCTGTGGTCACTGAGTGGTGAGGTTATTTTGGGCCATGAGGGCAAGTTACTTTCTCTGTaGTCACTGAGTGGTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLLSLWSLSGEVILGHEGKLLSL*SLSGEV Trigger: AACCTCACCACTCAGTGACCACAGAGAAAGTAACTT...GCCCTCATGGCCCAAAATAACCTCACCACTCAGTGACCACAGAGAAAGTAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCCTCTGTATTTCACCTCTATGGATGACTGCCAGTTCCTAATCTTTTTCGAGGACACTAATCTGTaGCACAGTCCAATCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLPLYFTSMDDCQFLIFFEDTNL*HSPIRL Trigger: TAGCCTGATTGGACTGTGCCACAGATTAGTGTCCTC...GAAAAAGATTAGGAACTGGCAGTCATCCATAGAGGTGAAATACAGAGGGAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGATGATATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCCTGCTTTGCGTGAACTaGGTTGCTCCTGCTATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AEDDILSGKRVLSFPLLGLLCVN*VAPAMG Trigger: TCCCATAGCAGGAGCAACTCAGTTCACGCAAAGCAG...GCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATATCATCCTCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR TCA 90 bp | GCAGAGGATGATATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCTCTTCCCTCAGGCACTaGGATTGCAGCCATCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: AEDDILSGKRVLSFPLLGSSLRH*DCSHPT Trigger: TGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGA...GCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATATCATCCTCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR TCA 90 bp | TACAGATCACTGCTTTTCCTCCAGAATAAGCCAATGTGGATAAGGGAGACCAAAAATGAAGTTAGGCCTTaGTCTGCTTCCAGCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YRSLLFLQNKPMWIRETKNEVRP*SASSQL Trigger: CAACTGGCTGGAAGCAGATCAAGGCCTAACTTCATT...TTTGGTCTCCCTTATCCACATTGGCTTATTCTGGAGGAAAAGCAGTGATCTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR TCA 90 bp | TTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCGTACATTTTCCCTCATaGTATTTCAGGTCATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSFPLLGIFPQALRLQPSVHFPS*YFRSFL Trigger: AAGGAATGACCTGAAATATCATGAGGGAAAATGTAC...GGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542035.2 |
||
| CDS-3UTR GCA 90 bp | GGACCAGCGCTTGTGAACTTCAACATATACCTTGCCAAATGGTTGAAATATTTGGTGGGTTCCTCCAGCTaGCTGGTTGGAGTTATCATT | + |
|
Preference number: 4 (lower is better) Translates to: GPALVNFNIYLAKWLKYLVGSSS*LVGVII Trigger: AATGATAACTCCAACCAGGCAGCTGGAGGAACCCAC...CAAATATTTCAACCATTTGGCAAGGTATATGTTGAAGTTCACAAGCGCTGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCCTCTGTATTTCACCTCTATGGATGACTGCCAGTTCCTAATCTTTTTCCTTTGTCACTTCTCTTaGTGTCCCTCCCTCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLYFTSMDDCQFLIFFLCHFS*CPSLCI Trigger: AATACAGAGGGAGGGACAGCAAGAGAAGTGACAAAG...GAAAAAGATTAGGAACTGGCAGTCATCCATAGAGGTGAAATACAGAGGGAGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR CCA 90 bp | AGATATTTTCACAGAACATATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCGTGCACTTGATGAACTaGGTGACTTCAGGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RYFHRTYCSPVRVKVKRSVHLMN*VTSGLM Trigger: CATCAGCCCTGAAGTCACCCAGTTCATCAAGTGCAC...GGAACGTTTCACTTTAACCCTGACTGGGGAGCAATATGTTCTGTGAAAATATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | AGATATTTTCACAGAACATATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCCAGCCATCCAACAAATaGGGAAGGGCAGAAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RYFHRTYCSPVRVKVKRSQPSNK*GRAERG Trigger: TCCTCTTTCTGCCCTTCCCCATTTGTTGGATGGCTG...GGAACGTTTCACTTTAACCCTGACTGGGGAGCAATATGTTCTGTGAAAATATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTCCCTCTGTATTTCACCTCTATGGATGACTGCCAGTTCCTAATCTTTTTCTTTCACCTCTATGGATaGCTGCCAGTTCCTAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLYFTSMDDCQFLIFFFHLYG*LPVPNL Trigger: AAGATTAGGAACTGGCAGTCATCCATAGAGGTGAAA...GAAAAAGATTAGGAACTGGCAGTCATCCATAGAGGTGAAATACAGAGGGAGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR GCA 90 bp | AGATATTTTCACAGAACATATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCAGTGAGACATCTGATTaGCGCAGTAGACTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RYFHRTYCSPVRVKVKRSSETSD*RSRLSM Trigger: CATGGACAGTCTACTGCGGCAATCAGATGTCTCACT...GGAACGTTTCACTTTAACCCTGACTGGGGAGCAATATGTTCTGTGAAAATATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR GCA 90 bp | TATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGCAGGGGTGAGTAGCTaGAGCAGTGATTCTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YSFRKKSIKLSSTRHLPSAGVSS*SSDSVC Trigger: ACAGACAGAATCACTGCTGCAGCTACTCACCCCTGC...TGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR GCA 90 bp | TACAGATCACTGCTTTTCCTCCAGAATAAGCCAATGTGGATAAGGGAGACCAAACTGCTCACTCAGGCCTaGTATGTAACCTGTACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YRSLLFLQNKPMWIRETKLLTQA*YVTCTY Trigger: ATAAGTACAGGTTACATAGCAGGCCTGAGTGAGCAG...TTTGGTCTCCCTTATCCACATTGGCTTATTCTGGAGGAAAAGCAGTGATCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR GCA 90 bp | TATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCATGGGGATAATGCAGAGGGTGCATAAAGTACCCTaGACATTACAGAGTGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: YCSPVRVKVKRSMGIMQRVHKVP*TLQSDK Trigger: TTTATCACTCTGTAATGTGCAGGGTACTTTATGCAC...CCTCTGCATTATCCCCATGGAACGTTTCACTTTAACCCTGACTGGGGAGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR GCA 90 bp | AGATATTTTCACAGAACATATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCCACTCTGTACTTCACTaGCAACATCCAGTCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RYFHRTYCSPVRVKVKRSHSVLH*QHPVCH Trigger: GTGACAGACTGGATGTTGGCAGTGAAGTACAGAGTG...GGAACGTTTCACTTTAACCCTGACTGGGGAGCAATATGTTCTGTGAAAATATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGTTCTGTAATGCTGAGTaGTCTTCTTGCCTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKKSIKLSSTRHLPSGTEFCNAE*SSCLLS Trigger: AGACAGAAGGCAAGAAGACCACTCAGCATTACAGAA...CTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542035.2 |
||
| CDS-3UTR TCA 90 bp | GGACCAGCGCTTGTGAACTTCAACATATACCTTGCCAAATGGTTGAAATATTTGTGCCTAAAGAAGTTCTaGCACAAGGCCTCAGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GPALVNFNIYLAKWLKYLCLKKF*HKASVL Trigger: TAACACTGAGGCCTTGTGTCAGAACTTCTTTAGGCA...CAAATATTTCAACCATTTGGCAAGGTATATGTTGAAGTTCACAAGCGCTGGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR TCA 90 bp | AGATATTTTCACAGAACATATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCTGCCTAAAGAAGTTCTaGCACAAGGCCTCAGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RYFHRTYCSPVRVKVKRSCLKKF*HKASVL Trigger: TAACACTGAGGCCTTGTGTCAGAACTTCTTTAGGCA...GGAACGTTTCACTTTAACCCTGACTGGGGAGCAATATGTTCTGTGAAAATATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR TCA 90 bp | TATGTGGTCAAGCAGGTGTGTAACTTACCGGGTACTATAGTATCCAGTGAAATACTGCTTCCAGCCAGTTaGTCTCTTAATTATGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YVVKQVCNLPGTIVSSEILLPAS*SLNYVG Trigger: GCCTACATAATTAAGAGATCAACTGGCTGGAAGCAG...TATTTCACTGGATACTATAGTACCCGGTAAGTTACACACCTGCTTGACCACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGATGATATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCAATGAAGTTAGGCCTTaGTCTGCTTCCAGCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AEDDILSGKRVLSFPLLGNEVRP*SASSQL Trigger: CAACTGGCTGGAAGCAGATCAAGGCCTAACTTCATT...GCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATATCATCCTCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR TCA 90 bp | TATGTGGTCAAGCAGGTGTGTAACTTACCGGGTACTATAGTATCCAGTGAAATAAAAGCCTGTGCATGGTaGATGGAAGAGATGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: YVVKQVCNLPGTIVSSEIKACAW*MEEMSH Trigger: ATGTGACATCTCTTCCATTCACCATGCACAGGCTTT...TATTTCACTGGATACTATAGTACCCGGTAAGTTACACACCTGCTTGACCACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR TCA 90 bp | AGATATTTTCACAGAACATATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCCCTGCCCCATGTAACTaGGAAATTCTACTTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RYFHRTYCSPVRVKVKRSPAPCN*EILLGH Trigger: ATGACCAAGTAGAATTTCTCAGTTACATGGGGCAGG...GGAACGTTTCACTTTAACCCTGACTGGGGAGCAATATGTTCTGTGAAAATATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR GCA 90 bp | AGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGTTTCACAGAACATATTaGTCCCCAGTCAGGGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKKSIKLSSTRHLPSGTEFHRTY*SPVRVK Trigger: TTTAACCCTGACTGGGGAGCAATATGTTCTGTGAAA...CTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR GCA 90 bp | TATAAGGAGGAAGTGTGTGCATGGCTAATAGACAAGGCAGAGAAAAGCAGTTATAGCTGGAAAAGCCTGTaGATGGTGAATGGAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YKEEVCAWLIDKAEKSSYSWKSL*MVNGRD Trigger: ATCTCTTCCATTCACCATGCACAGGCTTTTCCAGCT...ATAACTGCTTTTCTCTGCCTTGTCTATTAGCCATGCACACACTTCCTCCTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCCTCTGTATTTCACCTCTATGGATGACTGCCAGTTCCTAATCTTTTTCACTGAAACACATCAGTaGTTCTGGAGGGATAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLYFTSMDDCQFLIFFTETHQ*FWRDSI Trigger: AATACTATCCCTCCAGAAGCACTGATGTGTTTCAGT...GAAAAAGATTAGGAACTGGCAGTCATCCATAGAGGTGAAATACAGAGGGAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR GCA 90 bp | AGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGAAGTCTCATAGGCCTTaGAATCTAATTCTCATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLSFPLLGIFPQALRLQKSHRP*NLILIR Trigger: CCTAATGAGAATTAGATTGCAAGGCCTATGAGACTT...CTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR CCA 90 bp | TATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGTTGGGGAGGTCCAGTaGTTCAAGGAACATGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSFRKKSIKLSSTRHLPSVGEVQ*FKEHGN Trigger: ATTGCCATGTTCCTTGAACCACTGGACCTCCCCAAC...TGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | TACAGATCACTGCTTTTCCTCCAGAATAAGCCAATGTGGATAAGGGAGACCAAACAGAATAAGCCAATGTaGATAAGGGAGACCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YRSLLFLQNKPMWIRETKQNKPM*IRETKG Trigger: TCCTTTGGTCTCCCTTATCCACATTGGCTTATTCTG...TTTGGTCTCCCTTATCCACATTGGCTTATTCTGGAGGAAAAGCAGTGATCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | AGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCAAAATATCTGTTTGTTaGGCTTCTGTAATGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SIKLSSTRHLPSGTEIAAKISVC*ASVMLS Trigger: ACTCAGCATTACAGAAGCCCAACAAACAGATATTTT...GGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542035.2 |
||
| CDS-3UTR TCA 90 bp | TATGTGGTCAAGCAGGTGTGTAACTTACCGGGTACTATAGTATCCAGTGAAATATGCTTAGCCCAGTTTTaGAAAACCTGCCTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YVVKQVCNLPGTIVSSEICLAQF*KTCLPF Trigger: AAAAGGAAGGCAGGTTTTTCAAAACTGGGCTAAGCA...TATTTCACTGGATACTATAGTACCCGGTAAGTTACACACCTGCTTGACCACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR TCA 90 bp | TATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGACAGACCCTGGATTTaGCATTCATGCTCTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: YSFRKKSIKLSSTRHLPSDRPWI*HSCSNT Trigger: GGTGTTAGAGCATGAATGTCAAATCCAGGGTCTGTC...TGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGATGATATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCGCAAACCCAATAATATaGTCATTGAGCCAGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AEDDILSGKRVLSFPLLGANPII*SLSQLG Trigger: GCCAAGCTGGCTCAATGACCATATTATTGGGTTTGC...GCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATATCATCCTCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | TATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGTTCCTCCAGCTGCCTaGTTGGAGTTATCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: YSFRKKSIKLSSTRHLPSVPPAA*LELSLM Trigger: CATCAATGATAACTCCAACCAGGCAGCTGGAGGAAC...TGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | TACAGATCACTGCTTTTCCTCCAGAATAAGCCAATGTGGATAAGGGAGACCAAACATTATATAGATAGCTaGAAAAGCCTGTGCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YRSLLFLQNKPMWIRETKHYIDS*KSLCMV Trigger: CACCATGCACAGGCTTTTCCAGCTATCTATATAATG...TTTGGTCTCCCTTATCCACATTGGCTTATTCTGGAGGAAAAGCAGTGATCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | TATGTGGTCAAGCAGGTGTGTAACTTACCGGGTACTATAGTATCCAGTGAAATAACACATCAGTGCTTCTaGAGGGATAGTATTTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YVVKQVCNLPGTIVSSEITHQCF*RDSISF Trigger: GAACGAAATACTATCCCTCCAGAAGCACTGATGTGT...TATTTCACTGGATACTATAGTACCCGGTAAGTTACACACCTGCTTGACCACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR CCA 90 bp | TATGTGGTCAAGCAGGTGTGTAACTTACCGGGTACTATAGTATCCAGTGAAATAGCTGAAGCTCATCTTTaGTTTTCAAGTCTCATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YVVKQVCNLPGTIVSSEIAEAHL*FSSLIG Trigger: GCCTATGAGACTTGAAAACCAAAGATGAGCTTCAGC...TATTTCACTGGATACTATAGTACCCGGTAAGTTACACACCTGCTTGACCACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR TCA 90 bp | TATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCATTTCTCTGTGGTCACTaGGTGGTGAGGTTATTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSFRKKSIKLSSTRHLPSFLCGH*VVRLFW Trigger: CCAAAATAACCTCACCACTCAGTGACCACAGAGAAA...TGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR TCA 90 bp | AGATATTTTCACAGAACATATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCTTGTGTCATGTAACATaGATGGTATGTGGTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RYFHRTYCSPVRVKVKRSLCHVT*MVCGQA Trigger: TGCTTGACCACATACCATTCATGTTACATGACACAA...GGAACGTTTCACTTTAACCCTGACTGGGGAGCAATATGTTCTGTGAAAATATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR GCA 90 bp | TATAAGGAGGAAGTGTGTGCATGGCTAATAGACAAGGCAGAGAAAAGCAGTTATGAACTGAGTTGCTCCTaGTATGGGAATCATAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: YKEEVCAWLIDKAEKSSYELSCS*YGNHNE Trigger: TTCATTATGATTCCCATAGCAGGAGCAACTCAGTTC...ATAACTGCTTTTCTCTGCCTTGTCTATTAGCCATGCACACACTTCCTCCTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR GCA 90 bp | AGATATTTTCACAGAACATATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCTTTCACAGAACATATTaGTCCCCAGTCAGGGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RYFHRTYCSPVRVKVKRSFHRTY*SPVRVK Trigger: TTTAACCCTGACTGGGGAGCAATATGTTCTGTGAAA...GGAACGTTTCACTTTAACCCTGACTGGGGAGCAATATGTTCTGTGAAAATATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR GCA 90 bp | TATGTGGTCAAGCAGGTGTGTAACTTACCGGGTACTATAGTATCCAGTGAAATAACCTCTATGGATGACTaGCAGTTCCTAATCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YVVKQVCNLPGTIVSSEITSMDD*QFLIFF Trigger: GAAAAAGATTAGGAACTGGCAGTCATCCATAGAGGT...TATTTCACTGGATACTATAGTACCCGGTAAGTTACACACCTGCTTGACCACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAGCATTCCAGGAATCAGATGGAGGAAGATAGGGTAACATCATCTTTATCACAGAATAAGCCAATGTaGATAAGGGAGACCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FKHSRNQMEEDRVTSSLSQNKPM*IRETKG Trigger: TCCTTTGGTCTCCCTTATCCACATTGGCTTATTCTG...TGATAAAGATGATGTTACCCTATCTTCCTCCATCTGATTCCTGGAATGCTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | TATGTGGTCAAGCAGGTGTGTAACTTACCGGGTACTATAGTATCCAGTGAAATAAACATGAATGGTATGTaGTCAAGCAGGTGTGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: YVVKQVCNLPGTIVSSEINMNGM*SSRCVT Trigger: AGTTACACACCTGCTTGACCACATACCATTCATGTT...TATTTCACTGGATACTATAGTACCCGGTAAGTTACACACCTGCTTGACCACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR TCA 90 bp | AGATATTTTCACAGAACATATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCAATAAGTTTCATGGCTaGAGCTCATCTTTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RYFHRTYCSPVRVKVKRSNKFHG*SSSLVF Trigger: GAAAACCAAAGATGAGCTTCAGCCATGAAACTTATT...GGAACGTTTCACTTTAACCCTGACTGGGGAGCAATATGTTCTGTGAAAATATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR TCA 90 bp | GGACCAGCGCTTGTGAACTTCAACATATACCTTGCCAAATGGTTGAAATATTTGATACAACAGGATATCTaGAAGCAGGTTAGTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPALVNFNIYLAKWLKYLIQQDI*KQVSSV Trigger: AACTGAACTAACCTGCTTTCAGATATCCTGTTGTAT...CAAATATTTCAACCATTTGGCAAGGTATATGTTGAAGTTCACAAGCGCTGGTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR GCA 90 bp | TTCAAGCATTCCAGGAATCAGATGGAGGAAGATAGGGTAACATCATCTTTATCAGAACTGAGTTGCTCCTaGTATGGGAATCATAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FKHSRNQMEEDRVTSSLSELSCS*YGNHNE Trigger: TTCATTATGATTCCCATAGCAGGAGCAACTCAGTTC...TGATAAAGATGATGTTACCCTATCTTCCTCCATCTGATTCCTGGAATGCTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR GCA 90 bp | TATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGTTTGTCTCCTTTTCTaGCTAAGAAAGCCTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSFRKKSIKLSSTRHLPSVCLLF*LRKPPV Trigger: AACTGGAGGCTTTCTTAGGCAGAAAAGGAGACAAAC...TGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAGCATTCCAGGAATCAGATGGAGGAAGATAGGGTAACATCATCTTTATCACATTATATAGATAGCTaGAAAAGCCTGTGCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKHSRNQMEEDRVTSSLSHYIDS*KSLCMV Trigger: CACCATGCACAGGCTTTTCCAGCTATCTATATAATG...TGATAAAGATGATGTTACCCTATCTTCCTCCATCTGATTCCTGGAATGCTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGATGATATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCGGTTGGAGTTATCATTaGTGGCTAAAAATACAACTC | + |
|
Preference number: 4 (lower is better) Translates to: AEDDILSGKRVLSFPLLGGWSYH*WLKIQL Trigger: GAGTTGTATTTTTAGCCATCAATGATAACTCCAACC...GCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATATCATCCTCTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS CCA 90 bp | GCCTCGGGCCTCACCACCCCAACCAGCCTTCAGGCACCTCTGTGTTaGCCGGAAAGCGACAGCTACGGTCGCAAACTCAGAGGTTTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASGLTTPTSLQAPLC*PESDSYGRKLRGFV Trigger: GACGAAACCTCTGAGTTTGCGACCGTAGCTGTCGCTTTCCGGCCAACACAGAGGTGCCTGAAGGCTGGTTGGGGTGGTGAGGCCCGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564082.1 |
||
| CDS-3UTR CAA 90 bp | GGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATGGGGAAGGGCATCAGGAACCTGGGAATaGCCCTCCGCTTCACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GIFPQALRLQPSNKWGRASGTWE*PSASLC Trigger: ACAGAGTGAAGCGGAGGGCAATTCCCAGGTTCCTGA...TGCCCTTCCCCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542035.2 |
||
| CDS-3UTR CAA 90 bp | GGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATGGGGAAGGGCATCTCTGCTACCTGCTTaGCGTGAACTGAGTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GIFPQALRLQPSNKWGRASLLPA*RELSCS Trigger: GGAGCAACTCAGTTCACGCAAAGCAGGTAGCAGAGA...TGCCCTTCCCCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS GCA 90 bp | CCATGTAACTCAAGACTACGGGGTCCATCTTGTACTGACGAGGGCTaGTCAGAAATTCCAGAAGCTGAACAAGAGCTGCCTCGGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PCNSRLRGPSCTDEG*SEIPEAEQELPRAS Trigger: TGAGGCCCGAGGCAGCTCTTGTTCAGCTTCTGGAATTTCTGAGCAGCCCTCGTCAGTACAAGATGGACCCCGTAGTCTTGAGTTACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS GCA 90 bp | AACATGATGATGAGGATGAAGACCTTTATGACGATCCATTTCCACTaGCTCGGGCCTCACCACCCCAACCAGCCTTCAGGCACCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NMMMRMKTFMTIHFH*LGPHHPNQPSGTSV Trigger: CACAGAGGTGCCTGAAGGCTGGTTGGGGTGGTGAGGCCCGAGGCAGTGGAAATGGATCGTCATAAAGGTCTTCATCCTCATCATCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564082.1 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATGGGGAAGGGCAGAAAGACCTCAGGCACTGAGATaGCAGCCATCCAACAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: FPQALRLQPSNKWGRAERPQALR*QPSNKW Trigger: CCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGG...TCTTTCTGCCCTTCCCCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CAA 90 bp | TTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCCCTCCAGCTGCCTGGTaGGAGTTATCATTGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSFPLLGIFPQALRLQPSPPAAW*ELSLMA Trigger: AGCCATCAATGATAACTCCAACCAGGCAGCTGGAGG...GGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CAA 90 bp | TTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCGGGTTGCTAGTGCACTaGATGAACTGGGTGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSFPLLGIFPQALRLQPSGLLVH*MNWVTS Trigger: TGAAGTCACCCAGTTCATCAAGTGCACTAGCAACCC...GGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CAA 90 bp | AGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGCCTCTCTGCTACCTGCTTaGCGTGAACTGAGTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SIKLSSTRHLPSGTEIAASLLPA*RELSCS Trigger: GGAGCAACTCAGTTCACGCAAAGCAGGTAGCAGAGA...GGCTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CAA 90 bp | TTACTTTCTCTGTGGTCACTGAGTGGTGAGGTTATTTTGGGCCATGAGGGCTGGACAGTCATAGCTGTTTaGTTGGGCAGGGGCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLSLWSLSGEVILGHEGWTVIAV*LGRGFL Trigger: GAGAAAGCCCCTGCCCAACAAAACAGCTATGACTGT...CCAGCCCTCATGGCCCAAAATAACCTCACCACTCAGTGACCACAGAGAAAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR CAA 90 bp | AAGTTACTTTCTCTGTGGTCACTGAGTGGTGAGGTTATTTTGGGCCATGAGGGCGGGTTGCTAGTGCACTaGATGAACTGGGTGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KLLSLWSLSGEVILGHEGGLLVH*MNWVTS Trigger: TGAAGTCACCCAGTTCATCAAGTGCACTAGCAACCC...GCCCTCATGGCCCAAAATAACCTCACCACTCAGTGACCACAGAGAAAGTAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR CAA 90 bp | GGCATCTTCCCTCAGGCACTGAGATTGCAGCCATCCAACAAATGGGGAAGGGCATATCTTTATCTACACTaGTGGCCTATCATCAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GIFPQALRLQPSNKWGRAYLYLH*WPIISD Trigger: GTCACTGATGATAGGCCACAAGTGTAGATAAAGATA...TGCCCTTCCCCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGGGAAGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS TCA 90 bp | CAGAAGCTGAACAAGAGCTTGATTAATGGCACCACTCTTTCCTCATaGAACCTTCAGGAACCTGGGAATTGCCCTCCGCTTCACTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QKLNKSLINGTTLSS*NLQEPGNCPPLHSV Trigger: TACAGAGTGAAGCGGAGGGCAATTCCCAGGTTCCTGAAGGTTTCATGAGGAAAGAGTGGTGCCATTAATCAAGCTCTTGTTCAGCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542035.2 |
||
| CDS TCA 90 bp | GTGAGTAGCTGCAGCAGTGATTCTGTCTGTTGCCTAAAGAAGTTCTaGCACAAGGCCTCAGTGTTACATATCACGTACATCCCACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSSCSSDSVCCLKKF*HKASVLHITYIPQS Trigger: TGACTGTGGGATGTACGTGATATGTAACACTGAGGCCTTGTGTCAGAACTTCTTTAGGCAACAGACAGAATCACTGCTGCAGCTACTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CAA 90 bp | ATATTGAGACACGGGTTGGACAAGTGTGACTATACTTACCGGGCAATACAACAGCCAATAATATGGTCATaGAGCCAGCTTGGCGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: ILRHGLDKCDYTYRAIQQPIIWS*SQLGGS Trigger: GGATCCGCCAAGCTGGCTCAATGACCATATTATTGG...CTGTTGTATTGCCCGGTAAGTATAGTCACACTTGTCCAACCCGTGTCTCAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340912.6 |
||
| CDS-3UTR CAA 90 bp | AGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGATTGCAGAATACAACTCTCTTGTaGGGGAGGTCCAGTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVLSFPLLGIFPQALRLQNTTLL*GRSSGS Trigger: TGAACCACTGGACCTCCCCAACAAGAGAGTTGTATT...CTGCAATCTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCAGGCACTGAGACAGTCATAGCTGTTTaGTTGGGCAGGGGCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RKKSIKLSSTRHLPSGTETVIAV*LGRGFL Trigger: GAGAAAGCCCCTGCCCAACAAAACAGCTATGACTGT...CTCAGTGCCTGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
||
| CDS GCA 90 bp | CCATGTAACTCAAGACTACGGGGTCCATCTTGTACTGACGAGGGCTaGTCAGAAATTCCAGAAGCTGAACAAGAGACATGGATTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PCNSRLRGPSCTDEG*SEIPEAEQETWIFF Trigger: AAAGAAAATCCATGTCTCTTGTTCAGCTTCTGGAATTTCTGAGCAGCCCTCGTCAGTACAAGATGGACCCCGTAGTCTTGAGTTACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000564082.1 ENST00000564863.5 ENST00000567794.5 |
||
| CDS-3UTR CAA 90 bp | TACAGATCACTGCTTTTCCTCCAGAATAAGCCAATGTGGATAAGGGAGACCAAACCAATAATATGGTCATaGAGCCAGCTTGGCGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: YRSLLFLQNKPMWIRETKPIIWS*SQLGGS Trigger: GGATCCGCCAAGCTGGCTCAATGACCATATTATTGG...TTTGGTCTCCCTTATCCACATTGGCTTATTCTGGAGGAAAAGCAGTGATCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR CAA 90 bp | TATTGCTCCCCAGTCAGGGTTAAAGTGAAACGTTCCATGGGGATAATGCAGAGGAAGCTGAACAAGAGCTaGATTAATGGCACCACTCTT | + |
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Preference number: 5 (lower is better) Translates to: YCSPVRVKVKRSMGIMQRKLNKS*INGTTL Trigger: AAGAGTGGTGCCATTAATCAAGCTCTTGTTCAGCTT...CCTCTGCATTATCCCCATGGAACGTTTCACTTTAACCCTGACTGGGGAGCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542035.2 |
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| CDS-3UTR CAA 90 bp | TTCAAGCATTCCAGGAATCAGATGGAGGAAGATAGGGTAACATCATCTTTATCACCTCCAGCTGCCTGGTaGGAGTTATCATTGATGGCT | + |
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Preference number: 5 (lower is better) Translates to: FKHSRNQMEEDRVTSSLSPPAAW*ELSLMA Trigger: AGCCATCAATGATAACTCCAACCAGGCAGCTGGAGG...TGATAAAGATGATGTTACCCTATCTTCCTCCATCTGATTCCTGGAATGCTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR CAA 90 bp | TTCAAGCATTCCAGGAATCAGATGGAGGAAGATAGGGTAACATCATCTTTATCACCTCAGGCACTGAGATaGCAGCCATCCAACAAATGG | + |
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Preference number: 5 (lower is better) Translates to: FKHSRNQMEEDRVTSSLSPQALR*QPSNKW Trigger: CCATTTGTTGGATGGCTGCAATCTCAGTGCCTGAGG...TGATAAAGATGATGTTACCCTATCTTCCTCCATCTGATTCCTGGAATGCTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR CAA 90 bp | TACAGATCACTGCTTTTCCTCCAGAATAAGCCAATGTGGATAAGGGAGACCAAAAAAAATACAACTCTCTaGTTGGGGAGGTCCAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: YRSLLFLQNKPMWIRETKKNTTL*LGRSSG Trigger: ACCACTGGACCTCCCCAACAAGAGAGTTGTATTTTT...TTTGGTCTCCCTTATCCACATTGGCTTATTCTGGAGGAAAAGCAGTGATCTGTA 43% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR CAA 90 bp | GCAGAGGATGATATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCAAAAATACAACTCTCTaGTTGGGGAGGTCCAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: AEDDILSGKRVLSFPLLGKNTTL*LGRSSG Trigger: ACCACTGGACCTCCCCAACAAGAGAGTTGTATTTTT...GCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATATCATCCTCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS-3UTR CAA 90 bp | TATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCACTCCTGTTCATTCTCTaGACTGCTGTTGGAGTAAGT | + |
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Preference number: 5 (lower is better) Translates to: YSFRKKSIKLSSTRHLPSLLFIL*TAVGVS Trigger: ACTTACTCCAACAGCAGTCAAGAGAATGAACAGGAG...TGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542035.2 |
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| CDS-3UTR CAA 90 bp | TATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCATCTTCCCTCATTTCTGAATTCCATATaGAGACACGGGTTGGACAAG | + |
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Preference number: 5 (lower is better) Translates to: YSFRKKSIKLSSTRHLPSFLNSI*RHGLDK Trigger: CTTGTCCAACCCGTGTCTCAATATGGAATTCAGAAA...TGAGGGAAGATGCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340912.6 |
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| CDS-3UTR CAA 90 bp | GCAGAGGATGATATTCTTTCAGGAAAAAGAGTATTAAGCTTTCCTCTACTAGGCGAAAATATCTGTTTGTaGGGCTTCTGTAATGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: AEDDILSGKRVLSFPLLGENICL*GFCNAE Trigger: CTCAGCATTACAGAAGCCCAACAAACAGATATTTTC...GCCTAGTAGAGGAAAGCTTAATACTCTTTTTCCTGAAAGAATATCATCCTCTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000542035.2 |
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| CDS CAA 90 bp | TGCCTCGGGCCTCACCACCCCAACCAGCCTTCAGGCACCTCTGTGTaGGCCGGAAAGCGACAGCTACGGTCGCAAACTCAGAGGTTTCGT | + |
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Preference number: 6 (lower is better) Translates to: CLGPHHPNQPSGTSV*AGKRQLRSQTQRFR Trigger: ACGAAACCTCTGAGTTTGCGACCGTAGCTGTCGCTTTCCGGCCAACACAGAGGTGCCTGAAGGCTGGTTGGGGTGGTGAGGCCCGAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564082.1 |
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| CDS CAA 72 bp | CCTCACCACCCCAACCAGCCTTCAGGCACCTCTGTGTaGGCCGGAAAGCGACAGCTACGGTCGCAAACTCAG | + |
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Preference number: 6 (lower is better) Translates to: PHHPNQPSGTSV*AGKRQLRSQTQ Trigger: CTGAGTTTGCGACCGTAGCTGTCGCTTTCCGGCCAACACAGAGGTGCCTGAAGGCTGGTTGGGGTGGTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564082.1 |
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| CDS CCA 72 bp | CTCACCACCCCAACCAGCCTTCAGGCACCTCTGTGTTaGCCGGAAAGCGACAGCTACGGTCGCAAACTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LTTPTSLQAPLC*PESDSYGRKLR Trigger: TCTGAGTTTGCGACCGTAGCTGTCGCTTTCCGGCCAACACAGAGGTGCCTGAAGGCTGGTTGGGGTGGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564082.1 |
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| CDS GCA 72 bp | ATGAGGATGAAGACCTTTATGACGATCCATTTCCACTaGCTCGGGCCTCACCACCCCAACCAGCCTTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: MRMKTFMTIHFH*LGPHHPNQPSG Trigger: GCCTGAAGGCTGGTTGGGGTGGTGAGGCCCGAGGCAGTGGAAATGGATCGTCATAAAGGTCTTCATCCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564082.1 |
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| CDS GCA 72 bp | CTACGGTCGCAAACTCAGAGGTTTCGTCCCCAACCTTaGGACATCCCTTTCCAGTACAGGGAGAATCTAAAG | + |
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Preference number: 6 (lower is better) Translates to: LRSQTQRFRPQP*DIPFQYRENLK Trigger: CTTTAGATTCTCCCTGTACTGGAAAGGGATGTCGCAAGGTTGGGGACGAAACCTCTGAGTTTGCGACCGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564082.1 |
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| CDS CCA 72 bp | TGGCACCACTCTTTCCTCATGAAACCTTCAGGAACCTaGGAATTGCCCTCCGCTTCACTCTGTACTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: WHHSFLMKPSGT*ELPSASLCTSL Trigger: CAGTGAAGTACAGAGTGAAGCGGAGGGCAATTCCCAGGTTCCTGAAGGTTTCATGAGGAAAGAGTGGTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542035.2 |
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| CDS CAA 72 bp | GCTACGGTCGCAAACTCAGAGGTTTCGTCCCCAACCTaGCGACATCCCTTTCCAGTACAGGGAGAATCTAAA | + |
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Preference number: 6 (lower is better) Translates to: ATVANSEVSSPT*RHPFPVQGESK Trigger: TTTAGATTCTCCCTGTACTGGAAAGGGATGTCGCAAGGTTGGGGACGAAACCTCTGAGTTTGCGACCGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564082.1 |
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| CDS CAA 90 bp | GGCCTCAGTGTTACATATCACGTACATCCCACAGTCATAGCTGTTTaGTTGGGCAGGGGCTTTCTCTTCCACAAAGGCCAGTTTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GLSVTYHVHPTVIAV*LGRGFLFHKGQFVS Trigger: GGAGACAAACTGGCCTTTGTGGAAGAGAAAGCCCCTGCCCAACAAAACAGCTATGACTGTGGGATGTACGTGATATGTAACACTGAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS GCA 72 bp | CCTGGGAATTGCCCTCCGCTTCACTCTGTACTTCACTaGCAACATCCAGTCTGTCACTGCCTTGTACATTTT | + |
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Preference number: 6 (lower is better) Translates to: PGNCPPLHSVLH*QHPVCHCLVHF Trigger: AAAATGTACAAGGCAGTGACAGACTGGATGTTGGCAGTGAAGTACAGAGTGAAGCGGAGGGCAATTCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542035.2 |
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| CDS CAA 72 bp | CACTCTTTCCTCATGAAACCTTCAGGAACCTGGGAATaGCCCTCCGCTTCACTCTGTACTTCACTGCCAACA | + |
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Preference number: 6 (lower is better) Translates to: HSFLMKPSGTWE*PSASLCTSLPT Trigger: TGTTGGCAGTGAAGTACAGAGTGAAGCGGAGGGCAATTCCCAGGTTCCTGAAGGTTTCATGAGGAAAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542035.2 |
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| CDS CAA 72 bp | GTTACATATCACGTACATCCCACAGTCATAGCTGTTTaGTTGGGCAGGGGCTTTCTCTTCCACAAAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VTYHVHPTVIAV*LGRGFLFHKGQ Trigger: CTGGCCTTTGTGGAAGAGAAAGCCCCTGCCCAACAAAACAGCTATGACTGTGGGATGTACGTGATATGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS CAA 90 bp | GCCTGGTTGGAGTTATCATTGATGGCTAAAAATACAACTCTCTTGTaGGGGAGGTCCAGTGGTTCAAGGAACATGGCAATCTCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: AWLELSLMAKNTTLL*GRSSGSRNMAISAG Trigger: CCCAGCAGAGATTGCCATGTTCCTTGAACCACTGGACCTCCCCAACAAGAGAGTTGTATTTTTAGCCATCAATGATAACTCCAACCAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000340912.6 ENST00000542035.2 ENST00000564082.1 |
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| CDS CAA 90 bp | GCTGCCTGGTTGGAGTTATCATTGATGGCTAAAAATACAACTCTCTaGTTGGGGAGGTCCAGTGGTTCAAGGAACATGGCAATCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: AAWLELSLMAKNTTL*LGRSSGSRNMAISA Trigger: AGCAGAGATTGCCATGTTCCTTGAACCACTGGACCTCCCCAACAAGAGAGTTGTATTTTTAGCCATCAATGATAACTCCAACCAGGCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000340912.6 ENST00000542035.2 ENST00000564082.1 |
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| CDS CAA 90 bp | CTCAGTGTTACATATCACGTACATCCCACAGTCATAGCTGTTTTGTaGGGCAGGGGCTTTCTCTTCCACAAAGGCCAGTTTGTCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LSVTYHVHPTVIAVL*GRGFLFHKGQFVSF Trigger: AAAGGAGACAAACTGGCCTTTGTGGAAGAGAAAGCCCCTGCCCAACAAAACAGCTATGACTGTGGGATGTACGTGATATGTAACACTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS TCA 72 bp | AACAAGAGCTTGATTAATGGCACCACTCTTTCCTCATaGAACCTTCAGGAACCTGGGAATTGCCCTCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: NKSLINGTTLSS*NLQEPGNCPPL Trigger: AAGCGGAGGGCAATTCCCAGGTTCCTGAAGGTTTCATGAGGAAAGAGTGGTGCCATTAATCAAGCTCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542035.2 |
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| CDS CCA 72 bp | CTGTTGGCAAAGTACTCAAACGCAAACCCAATAATATaGTCATTGAGCCAGCTTGGCGGATCCAATAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LLAKYSNANPII*SLSQLGGSNSE Trigger: CTCACTATTGGATCCGCCAAGCTGGCTCAATGACCATATTATTGGGTTTGCGTTTGAGTACTTTGCCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000340912.6 ENST00000542035.2 ENST00000564082.1 ENST00000564863.5 |
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| CDS CAA 90 bp | TTTCTTTGGTTGAAAGGGCTTTGCCATGAAATCCTGAGGGAATATTaGCTTAGCCTAATGTATTCCCTCCATTGTGGCTTAAGGGGACCG | + |
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Preference number: 6 (lower is better) Translates to: FLWLKGLCHEILREY*LSLMYSLHCGLRGP Trigger: CGGTCCCCTTAAGCCACAATGGAGGGAATACATTAGGCTAAGCAAATATTCCCTCAGGATTTCATGGCAAAGCCCTTTCAACCAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564863.5 ENST00000567794.5 |
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| CDS TCA 72 bp | TGCAGCAGTGATTCTGTCTGTTGCCTAAAGAAGTTCTaGCACAAGGCCTCAGTGTTACATATCACGTACATC | + |
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Preference number: 6 (lower is better) Translates to: CSSDSVCCLKKF*HKASVLHITYI Trigger: GATGTACGTGATATGTAACACTGAGGCCTTGTGTCAGAACTTCTTTAGGCAACAGACAGAATCACTGCTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000340912.6 ENST00000542035.2 |
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| CDS CAA 72 bp | GAGTTATCATTGATGGCTAAAAATACAACTCTCTTGTaGGGGAGGTCCAGTGGTTCAAGGAACATGGCAATC | + |
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Preference number: 6 (lower is better) Translates to: ELSLMAKNTTLL*GRSSGSRNMAI Trigger: GATTGCCATGTTCCTTGAACCACTGGACCTCCCCAACAAGAGAGTTGTATTTTTAGCCATCAATGATAACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000340912.6 ENST00000542035.2 ENST00000564082.1 |
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| CDS CAA 72 bp | TTGGAGTTATCATTGATGGCTAAAAATACAACTCTCTaGTTGGGGAGGTCCAGTGGTTCAAGGAACATGGCA | + |
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Preference number: 6 (lower is better) Translates to: LELSLMAKNTTL*LGRSSGSRNMA Trigger: TGCCATGTTCCTTGAACCACTGGACCTCCCCAACAAGAGAGTTGTATTTTTAGCCATCAATGATAACTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000340912.6 ENST00000542035.2 ENST00000564082.1 |
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| CDS CAA 72 bp | TTGAAAGGGCTTTGCCATGAAATCCTGAGGGAATATTaGCTTAGCCTAATGTATTCCCTCCATTGTGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: LKGLCHEILREY*LSLMYSLHCGL Trigger: TAAGCCACAATGGAGGGAATACATTAGGCTAAGCAAATATTCCCTCAGGATTTCATGGCAAAGCCCTTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564863.5 ENST00000567794.5 |
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| CDS CAA 90 bp | AACATGATGATGAGGATGAAGACCTTTATGACGATCCATTTCCACTaGTTATCTTTCTCCTTAGTCGCGATCCTTTCTTTGGTTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: NMMMRMKTFMTIHFH*LSFSLVAILSLVER Trigger: CCTTTCAACCAAAGAAAGGATCGCGACTAAGGAGAAAGATAACAAGTGGAAATGGATCGTCATAAAGGTCTTCATCCTCATCATCATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564863.5 |
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| CDS CAA 72 bp | ATGAGGATGAAGACCTTTATGACGATCCATTTCCACTaGTTATCTTTCTCCTTAGTCGCGATCCTTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: MRMKTFMTIHFH*LSFSLVAILSL Trigger: CAAAGAAAGGATCGCGACTAAGGAGAAAGATAACAAGTGGAAATGGATCGTCATAAAGGTCTTCATCCTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564863.5 |
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