RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SENP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000161956

Ensembl transcript IDs: ENST00000321337.12, ENST00000429205.6, ENST00000580231.5, ENST00000580997.1, ENST00000581010.1, ENST00000581093.1, ENST00000582789.5, ENST00000583277.1, ENST00000619785.1

Found 323 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGTCGCCTCACATCAACAGAGATGAGGGACCAATGCACCTCCAGGTaGATGGGGATTAGCAGTAGCTCCTTATTGAAGATGTCCACGTTT +
Preference number: 1 (lower is better)
Translates to: RRLTSTEMRDQCTSR*MGISSSSLLKMSTF
Trigger: AAACGTGGACATCTTCAATAAGGAGCTACTGCTAATCCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTCTGTTGATGTGAGGCGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
3UTR-3UTR CCA 90 bp CTCCTTGTAGATCTGCCGACGAAGTTTGGGCATGTCCTGCTGGGTGAAGCTGAAGCACCTCCAGGTGGATaGGGATTAGCAGTAGCTCCT +
Preference number: 2 (lower is better)
Translates to: LLVDLPTKFGHVLLGEAEAPPGG*GLAVAP
Trigger: AGGAGCTACTGCTAATCCCCATCCACCTGGAGGTGC...TTCAGCTTCACCCAGCAGGACATGCCCAAACTTCGTCGGCAGATCTACAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619785.1
3UTR-3UTR CCA 90 bp GGTGAAGCTGAATGGCTGAGACAGGGCCAGATGCTTGCAGTACTGCAACACAAACCTTTCCAGCCCTGGTaGAAATCCAGTCGGTCTTTC +
Preference number: 2 (lower is better)
Translates to: GEAEWLRQGQMLAVLQHKPFQPW*KSSRSF
Trigger: GAAAGACCGACTGGATTTCCACCAGGGCTGGAAAGG...TTTGTGTTGCAGTACTGCAAGCATCTGGCCCTGTCTCAGCCATTCAGCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619785.1
3UTR-3UTR TCA 90 bp GTAACCTTTCCAGCCCTGGTGGAAATCCAGTCGGTCTTTCTTTACCGCCTCTGCGCAGTAGCTCCTTATTaGAGATGTCCACGTTTTTGG +
Preference number: 2 (lower is better)
Translates to: VTFPALVEIQSVFLYRLCAVAPY*RCPRFW
Trigger: CCAAAAACGTGGACATCTTCAATAAGGAGCTACTGC...GCAGAGGCGGTAAAGAAAGACCGACTGGATTTCCACCAGGGCTGGAAAGGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619785.1
3UTR-3UTR TCA 90 bp CTCCTTGTAGATCTGCCGACGAAGTTTGGGCATGTCCTGCTGGGTGAAGCTGAATGGCCACATTCATTTTaGAGTAACCTTTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: LLVDLPTKFGHVLLGEAEWPHSF*SNLSSP
Trigger: AGGGCTGGAAAGGTTACTTCAAAATGAATGTGGCCA...TTCAGCTTCACCCAGCAGGACATGCCCAAACTTCGTCGGCAGATCTACAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
3UTR-3UTR GCA 90 bp ATATATATATATAAAAGTTTGAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCCAGCACTGATTTCCTaGTCCCTGCACGGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: IYIYKSLKIWQAVILLSAPALIS*SLHGEG
Trigger: CCCTTCCCCGTGCAGGGAGCAGGAAATCAGTGCTGG...GGCGGACAATAGGATCACTGCCTGCCAGATCTTCAAACTTTTATATATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
3UTR-3UTR GCA 90 bp GGTGAAGCTGAATGGCTGAGACAGGGCCAGATGCTTGCAGTACTGCAACACAAATCACTGTCATTATTCTaGCTGGCCACATTCATTTTG +
Preference number: 2 (lower is better)
Translates to: GEAEWLRQGQMLAVLQHKSLSLF*LATFIL
Trigger: CAAAATGAATGTGGCCAGGCAGAATAATGACAGTGA...TTTGTGTTGCAGTACTGCAAGCATCTGGCCCTGTCTCAGCCATTCAGCTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
3UTR-3UTR CCA 90 bp GGCCACATTCATTTTGAAGTAACCTTTCCAGCCCTGGTGGAAATCCAGTCGGTCCCCCATCATAACCCTTaGTACGGAGTTTATCATAGA +
Preference number: 2 (lower is better)
Translates to: GHIHFEVTFPALVEIQSVPHHNP*YGVYHR
Trigger: TCTATGATAAACTCCGTACCAAGGGTTATGATGGGG...GACCGACTGGATTTCCACCAGGGCTGGAAAGGTTACTTCAAAATGAATGTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619785.1
3UTR-3UTR GCA 90 bp AACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTATCCAGCACTGATTTCCTaGTCCCTGCACGGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: NKGSFIDQSRTVAFIYFYPALIS*SLHGEG
Trigger: CCCTTCCCCGTGCAGGGAGCAGGAAATCAGTGCTGG...ATAAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
3UTR-3UTR GCA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTAGGGCCACACTCCCCTaGAAACAGAGGAAGAAAGGG +
Preference number: 2 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFRATLP*KQRKKG
Trigger: CCCTTTCTTCCTCTGTTTGCAGGGGAGTGTGGCCCT...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
3UTR-3UTR GCA 90 bp AACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTATAGGGCCACACTCCCCTaGAAACAGAGGAAGAAAGGG +
Preference number: 2 (lower is better)
Translates to: NKGSFIDQSRTVAFIYFYRATLP*KQRKKG
Trigger: CCCTTTCTTCCTCTGTTTGCAGGGGAGTGTGGCCCT...ATAAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
3UTR GCA 72 bp GTGCGTCGCCTCACATCAACAGAGATGAGGGACCAATaGACCTCCAGGTGGATGGGGATTAGCAGTAGCTCC +
Preference number: 3 (lower is better)
Translates to: VRRLTSTEMRDQ*TSRWMGISSSS
Trigger: GGAGCTACTGCTAATCCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTCTGTTGATGTGAGGCGACGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
3UTR-3UTR CAA 90 bp CTTTTCTGTAGCCACCCCCTGCACATCAGAAATCAACAAGTATTCTCTCAAAGATTCCCATTTATGGGCTaGGGGTCTGGGGTACGAGGC +
Preference number: 3 (lower is better)
Translates to: LFCSHPLHIRNQQVFSQRFPFMG*GSGVRG
Trigger: GCCTCGTACCCCAGACCCCAAGCCCATAAATGGGAA...TCTTTGAGAGAATACTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000581093.1
3UTR-3UTR CAA 90 bp CTCCTTGTAGATCTGCCGACGAAGTTTGGGCATGTCCTGCTGGGTGAAGCTGAAAGCAGTAGCTCCTTATaGAAGATGTCCACGTTTTTG +
Preference number: 3 (lower is better)
Translates to: LLVDLPTKFGHVLLGEAESSSSL*KMSTFL
Trigger: CAAAAACGTGGACATCTTCAATAAGGAGCTACTGCT...TTCAGCTTCACCCAGCAGGACATGCCCAAACTTCGTCGGCAGATCTACAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619785.1
3UTR CCA 72 bp ACATCAACAGAGATGAGGGACCAATGCACCTCCAGGTaGATGGGGATTAGCAGTAGCTCCTTATTGAAGATG +
Preference number: 3 (lower is better)
Translates to: TSTEMRDQCTSR*MGISSSSLLKM
Trigger: CATCTTCAATAAGGAGCTACTGCTAATCCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTCTGTTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
3UTR-3UTR CAA 90 bp AACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTATTTCCCATTTATGGGCTaGGGGTCTGGGGTACGAGGC +
Preference number: 3 (lower is better)
Translates to: NKGSFIDQSRTVAFIYFYFPFMG*GSGVRG
Trigger: GCCTCGTACCCCAGACCCCAAGCCCATAAATGGGAA...ATAAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
3UTR-3UTR CAA 90 bp AACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTATAGGAACTGGAGTTTCTaGGGAAGGGACTCCCATGTC +
Preference number: 3 (lower is better)
Translates to: NKGSFIDQSRTVAFIYFYRNWSF*GRDSHV
Trigger: GACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCT...ATAAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTCGCAGGGGGCTGTGCTaGCCGGCTTTCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALIRRGLC*PAFSPG
Trigger: GCCTGGGGAGAAAGCCGGCCAGCACAGCCCCCTGCG...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTGGGGGATGGCACCTGTaGCGTCGCACCCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGGGWHL*RRTPLL
Trigger: CAGCAAGGGGGTGCGACGCCACAGGTGCCATCCCCC...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTGGGCCCAGAGGGCACTaGTGGAGACCCTCTCACCCC +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGGPRGH*WRPSHP
Trigger: GGGGTGAGAGGGTCTCCACCAGTGCCCTCTGGGCCC...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGATGGTTCTTGGGGTGTaGGAGGCCCCGCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWMVLGV*EAPPPA
Trigger: GGCCGGCGGCGGGGCCTCGCACACCCCAAGAACCAT...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGATTCCAACGCTTCTaGGCCGCGTGCCGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWGFQRF*AACRAA
Trigger: GGCGGCGCGGCACGCGGCCCAGAAGCGTTGGAATCC...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321337.12
CDS-3UTR CCA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTCGGGGTTTGGGAGGTaGGGGCCAACGAAGACGCTC +
Preference number: 4 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGSGFGR*GPTKTL
Trigger: GAGCGTCTTCGTTGGCCCCCACCTCCCAAACCCCGA...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTCTCCCGCCTGGGACTTaGGTAAGCTGGGGGTATGCC +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALILPPGT*VSWGYA
Trigger: GGCATACCCCCAGCTTACTCAAGTCCCAGGCGGGAG...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTGCCCACCGGCAGCGGTaGCGCACGATTAGTACGTCA +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGAHRQR*RTISTS
Trigger: TGACGTACTAATCGTGCGCCACCGCTGCCGGTGGGC...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321337.12
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTCCGGAAGGCTCTCATaGCTCGGCGGCGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGSGRLS*LGGGAV
Trigger: CACAGCGCCGCCGCCGAGCCATGAGAGCCTTCCGGA...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCGGGGGATGGCACCTGTaGCGTCGCACCCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGGGWHL*RRTPLL
Trigger: CAGCAAGGGGGTGCGACGCCACAGGTGCCATCCCCC...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTACGACAACAGGGGGATaGCACCTGTGGCGTCGCACC +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALITTTGG*HLWRRT
Trigger: GGTGCGACGCCACAGGTGCCATCCCCCTGTTGTCGT...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGGCCCAGAGGGCACTaGTGGAGACCCTCTCACCCC +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWGPRGH*WRPSHP
Trigger: GGGGTGAGAGGGTCTCCACCAGTGCCCTCTGGGCCC...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTGGCGTCGCACCCCCTTaGTGGGGTGAAAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGGVAPP*WGERWF
Trigger: GAACCATCTTTCACCCCAGCAAGGGGGTGCGACGCC...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCGCTGGCATCAGGGGGTaGCAAGCTGCGCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVAGIRG*QAALPF
Trigger: GAAGGGGAGCGCAGCTTGGCACCCCCTGATGCCAGC...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTCTCCCCAGGCCTCTCTaGCTCTTCTGCCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALILPRPL*LFCHAQ
Trigger: TTGGGCATGGCAGAAGAGGCAGAGAGGCCTGGGGAG...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTCTCGCAGGGGGCTGTaGTGGCCGGCTTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVSRRGL*WPAFSP
Trigger: TGGGGAGAAAGCCGGCCAGCACAGCCCCCTGCGAGA...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTTGTACGCAGGTCACATaGTCCTCTCGCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALICTQVT*SSRRGL
Trigger: CAGCCCCCTGCGAGAGGAGCATGTGACCTGCGTACA...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTCCAGCACTGATTTCCTaGTCCCTGCACGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGPALIS*SLHGEG
Trigger: CCCTTCCCCGTGCAGGGAGCAGGAAATCAGTGCTGG...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTGTGAAAGATGGTTCTTaGGGTGTGCGAGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALIVKDGS*GVRGPA
Trigger: GGCGGGGCCTCGCACACCCCAAGAACCATCTTTCAC...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTGCTGCGCTCCCCTTCTaGCCCAGATTGTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGAALPF*PRLSPK
Trigger: TTTGGGGGACAATCTGGGCCAGAAGGGGAGCGCAGC...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTATGGGCTTGGGGTCTaGGGTACGAGGCTCACACAG +
Preference number: 4 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGYGLGV*GTRLTQ
Trigger: CTGTGTGAGCCTCGTACCCCAGACCCCAAGCCCATA...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTCCCGCCTGGGACTTaGGTAAGCTGGGGGTATGCC +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGLPPGT*VSWGYA
Trigger: GGCATACCCCCAGCTTACTCAAGTCCCAGGCGGGAG...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTTGGGAGGTTCCCAGCTaGCTCCATCTTGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGWEVPS*LHLGGS
Trigger: GCTGCCCCCAAGATGGAGTCAGCTGGGAACCTCCCA...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTGTTGGGCAGAGTACATaGAAGGAGGCCCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGVGQST*KEARVR
Trigger: CCTGACTCGGGCCTCCTTTCATGTACTCTGCCCAAC...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTGTTGGGCAGAGTACATaGAAGGAGGCCCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALIVGQST*KEARVR
Trigger: CCTGACTCGGGCCTCCTTTCATGTACTCTGCCCAAC...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCCACCACCCCCAGCACTaGTTTCCTGCTCCCTGCACG +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVHHPQH*FPAPCT
Trigger: CGTGCAGGGAGCAGGAAATCAGTGCTGGGGGTGGTG...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTAGATCTGGCAGGCAGTaGTCCTATTGTCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGRSGRQ*SYCPPT
Trigger: GGTGGGCGGACAATAGGATCACTGCCTGCCAGATCT...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTCCCTCACCATGGCATTaGCTGGCATCCGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGPSPWH*LASAGK
Trigger: CTTACCAGCGGATGCCAGGCAATGCCATGGTGAGGG...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR GCA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGAGGGCCACACTCCCCTaGAAACAGAGGAAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGRATLP*KQRKKG
Trigger: CCCTTTCTTCCTCTGTTTGCAGGGGAGTGTGGCCCT...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000581093.1
CDS-3UTR CCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGCCGCCGCGCCGCCTCTaGCTCTGCTTCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWPPRRL*LCFSFS
Trigger: GCTGAAGCTGAAGCAGAGCCAGAGGCGGCGCGGCGG...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321337.12
CDS-3UTR CCA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGGTCGCACCCCCTTGCTaGGGTGAAAGATGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGVAPPC*GERWFL
Trigger: CAAGAACCATCTTTCACCCCAGCAAGGGGGTGCGAC...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTACGACAACAGGGGGATaGCACCTGTGGCGTCGCACC +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGTTTGG*HLWRRT
Trigger: GGTGCGACGCCACAGGTGCCATCCCCCTGTTGTCGT...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGCACCATGGCATTGCCTaGCATCCGCTGGTAAGACTG +
Preference number: 4 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGHHGIA*HPLVRL
Trigger: CAGTCTTACCAGCGGATGCCAGGCAATGCCATGGTG...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp ACAGAGATGAGGGACCAATGCACCTCCAGGTGGATGGGGATTAGCAGTAGCTCCGGAAGCCCCTCACCATaGCATTGCCTGGCATCCGCT +
Preference number: 4 (lower is better)
Translates to: TEMRDQCTSRWMGISSSSGSPSP*HCLASA
Trigger: AGCGGATGCCAGGCAATGCCATGGTGAGGGGCTTCC...GGAGCTACTGCTAATCCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR CCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTTATGGGCTTGGGGTCTaGGGTACGAGGCTCACACAG +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGYGLGV*GTRLTQ
Trigger: CTGTGTGAGCCTCGTACCCCAGACCCCAAGCCCATA...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCACCCTCCACCTGACTTaGGTCGGGGTTTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVTLHLT*VGVWEV
Trigger: CACCTCCCAAACCCCGACTCAAGTCAGGTGGAGGGT...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCCCAAACCCTCCACCTaGCTTGAGTCGGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGPKPST*LESGFG
Trigger: CCCAAACCCCGACTCAAGTCAGGTGGAGGGTTTGGG...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGAGGTTCCCAGCTaGCTCCATCTTGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWAWEVPS*LHLGGS
Trigger: GCTGCCCCCAAGATGGAGTCAGCTGGGAACCTCCCA...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTGAGCAGGTTTTTCGATaGGTGGGGCGGGAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWAEQVFR*VGREGR
Trigger: CCGCCCTTCCCGCCCCACTCATCGAAAAACCTGCTC...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGCCCCATCCTCAGCCATaGGAGCACCTAGCAGACCCA +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWPHPQP*EHLADP
Trigger: TGGGTCTGCTAGGTGCTCTCATGGCTGAGGATGGGG...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCCCCATCCTCAGCCATaGGAGCACCTAGCAGACCCA +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGPHPQP*EHLADP
Trigger: TGGGTCTGCTAGGTGCTCTCATGGCTGAGGATGGGG...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGACTTTGGAGTCCACCTaGGTCCATCTTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGTLEST*VHLPPW
Trigger: CCATGGAGGAAGATGGACTCAGGTGGACTCCAAAGT...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTGGCATCAGGGGGTaGCAAGCTGCGCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWAGIRG*QAALPF
Trigger: GAAGGGGAGCGCAGCTTGGCACCCCCTGATGCCAGC...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGTACGCAGGTCACATaGTCCTCTCGCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVCTQVT*SSRRGL
Trigger: CAGCCCCCTGCGAGAGGAGCATGTGACCTGCGTACA...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCCCAGCACTGATTTCCTaGTCCCTGCACGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGPALIS*SLHGEG
Trigger: CCCTTCCCCGTGCAGGGAGCAGGAAATCAGTGCTGG...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCGAAGACGCTCCCGCCTaGGACTTGAGTAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGEDAPA*DLSKLG
Trigger: CCCCAGCTTACTCAAGTCCCAGGCGGGAGCGTCTTC...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTCGGGGTTTGGGAGGTaGGGGCCAACGAAGACGCTC +
Preference number: 4 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWASGFGR*GPTKTL
Trigger: GAGCGTCTTCGTTGGCCCCCACCTCCCAAACCCCGA...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTAGGTTTTTCGATGAGTaGGGCGGGAAGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWARFFDE*GGKGGA
Trigger: GGCCCCGCCCTTCCCGCCCCACTCATCGAAAAACCT...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCGCTGCGCTCCCCTTCTaGCCCAGATTGTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGAALPF*PRLSPK
Trigger: TTTGGGGGACAATCTGGGCCAGAAGGGGAGCGCAGC...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTACACCAGGCCCTTCCTaGAAGGGGTGGAAAACTCCT +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALITPGPS*KGWKTP
Trigger: AGGAGTTTTCCACCCCTTCCAGGAAGGGCCTGGTGT...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GATGGTGCGTCGCCTCACATCAACAGAGATGAGGGACCAATGCACCTCCAGGTGCACCATGGCATTGCCTaGCATCCGCTGGTAAGACTG +
Preference number: 4 (lower is better)
Translates to: DGASPHINRDEGPMHLQVHHGIA*HPLVRL
Trigger: CAGTCTTACCAGCGGATGCCAGGCAATGCCATGGTG...CACCTGGAGGTGCATTGGTCCCTCATCTCTGTTGATGTGAGGCGACGCACCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR CCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTGCACCTCCAGGTGGATaGGGATTAGCAGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGAPPGG*GLAVAP
Trigger: AGGAGCTACTGCTAATCCCCATCCACCTGGAGGTGC...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGCCTTTCCAGCCCTGGTaGAAATCCAGTCGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGPFQPW*KSSRSF
Trigger: GAAAGACCGACTGGATTTCCACCAGGGCTGGAAAGG...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000582789.5
CDS-3UTR CCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTCTGGGTGAAGCTGAATaGCTGAGACAGGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALILGEAE*LRQGQM
Trigger: CATCTGGCCCTGTCTCAGCCATTCAGCTTCACCCAG...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGAGCAGGTTTTTCGATaGGTGGGGCGGGAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWEQVFR*VGREGR
Trigger: CCGCCCTTCCCGCCCCACTCATCGAAAAACCTGCTC...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTCAGCGAGGTGCTTTTTaGGTAGAGCAGCATCCGGAA +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALIQRGAF*VEQHPE
Trigger: TTCCGGATGCTGCTCTACTCAAAAAGCACCTCGCTG...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTCACATCAACAGAGATaGGGGACCAATGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGSHQQR*GTNAPP
Trigger: TGGAGGTGCATTGGTCCCTCATCTCTGTTGATGTGA...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTGCGAGTCAAAATAGGTaGTGGTGCGTCGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALIASQNR*WCVASH
Trigger: ATGTGAGGCGACGCACCATCACCTATTTTGACTCGC...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTGCGAGTCAAAATAGGTaGTGGTGCGTCGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGASQNR*WCVASH
Trigger: ATGTGAGGCGACGCACCATCACCTATTTTGACTCGC...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTACGAGGCTCACACAGTaGGTTTGCAGTGACACAGCT +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGTRLTQ*VCSDTA
Trigger: AGCTGTGTCACTGCAAACTCACTGTGTGAGCCTCGT...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGCACCACCCCCAGCACTaGTTTCCTGCTCCCTGCACG +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWHHPQH*FPAPCT
Trigger: CGTGCAGGGAGCAGGAAATCAGTGCTGGGGGTGGTG...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTAGTAAGCTGGGGGTATaGCGGGTCCAGGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWASKLGV*RVQEAQ
Trigger: CTGAGCCTCCTGGACCCGGCATACCCCCAGCTTACT...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCGGGCAGCCTCCAAGCTaGCACTTCCTCCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVGQPPS*HFLLFI
Trigger: GATGAAGAGGAGGAAGTGGCAGCTTGGAGGCTGCCC...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCCCCTCACCATGGCATTaGCTGGCATCCGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVPSPWH*LASAGK
Trigger: CTTACCAGCGGATGCCAGGCAATGCCATGGTGAGGG...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR GCA 90 bp CTTTCCAGCCCTGGTGGAAATCCAGTCGGTCTTTCTTTACCGCCTCTGCCTGTACCCTCACCATGGCATTaGCTGGCATCCGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: LSSPGGNPVGLSLPPLPVPSPWH*LASAGK
Trigger: CTTACCAGCGGATGCCAGGCAATGCCATGGTGAGGG...TACAGGCAGAGGCGGTAAAGAAAGACCGACTGGATTTCCACCAGGGCTGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR GCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCGAGATGAGGGACCAATaGACCTCCAGGTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGEMRDQ*TSRWMG
Trigger: CCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTC...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR GCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTGAGATGAGGGACCAATaGACCTCCAGGTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGEMRDQ*TSRWMG
Trigger: CCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTC...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR GCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTAGTTTGGGCATGTCCTaGTGGGTGAAGCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALISLGMS*WVKLNG
Trigger: GCCATTCAGCTTCACCCAGCAGGACATGCCCAAACT...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTAGTTTGGGCATGTCCTaGTGGGTGAAGCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGSLGMS*WVKLNG
Trigger: GCCATTCAGCTTCACCCAGCAGGACATGCCCAAACT...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTCCCCAAAGCTTCCAGTaGAATGTCAGCGAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALIPQSFQ*NVSEVL
Trigger: AAGCACCTCGCTGACATTCCACTGGAAGCTTTGGGG...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGGTCCCCCAAAACCGTTaGGCAGAGTACATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGVPQNR*AEYMKG
Trigger: TCCTTTCATGTACTCTGCCCAACGGTTTTGGGGGAC...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTGGAAGCCCCTCACCATaGCATTGCCTGGCATCCGCT +
Preference number: 4 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWAGSPSP*HCLASA
Trigger: AGCGGATGCCAGGCAATGCCATGGTGAGGGGCTTCC...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTTCCCCAAGTCATCCATaGTCAGCACGTGCCGCTTAT +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGSPSHP*SARAAY
Trigger: ATAAGCGGCACGTGCTGACCATGGATGACTTGGGGA...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTTATGGGCTTGGGGTCTaGGGTACGAGGCTCACACAG +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGYGLGV*GTRLTQ
Trigger: CTGTGTGAGCCTCGTACCCCAGACCCCAAGCCCATA...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTATGGGCTTGGGGTCTaGGGTACGAGGCTCACACAG +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGYGLGV*GTRLTQ
Trigger: CTGTGTGAGCCTCGTACCCCAGACCCCAAGCCCATA...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGGGAACTGGAGTTTCTTaGGAAGGGACTCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGGTGVS*EGTPMS
Trigger: AGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCCCAAATCTGAGCCCTaGAAAAGCTCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGPKSEP*KSSWAT
Trigger: TGTGGCCCAGGAGCTTTTTCAGGGCTCAGATTTGGG...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGAGGCTGCCATACGTTTaGAGGAATTCGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGRLPYV*RNSSKM
Trigger: CATCTTGGACGAATTCCTTCAAACGTATGGCAGCCT...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR TCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTTCACATCAACAGAGATaGGGGACCAATGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALISHQQR*GTNAPP
Trigger: TGGAGGTGCATTGGTCCCTCATCTCTGTTGATGTGA...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTAGATCTGGCAGGCAGTaGTCCTATTGTCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWARSGRQ*SYCPPT
Trigger: GGTGGGCGGACAATAGGATCACTGCCTGCCAGATCT...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGGCGTCGCACCCCCTTaGTGGGGTGAAAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWGVAPP*WGERWF
Trigger: GAACCATCTTTCACCCCAGCAAGGGGGTGCGACGCC...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGAGGGCCACACTCCCCTaGAAACAGAGGAAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWRATLP*KQRKKG
Trigger: CCCTTTCTTCCTCTGTTTGCAGGGGAGTGTGGCCCT...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000581093.1
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTGCTGGGGTGAAAGATaGTTCTTGGGGTGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGCWGER*FLGCAR
Trigger: CCTCGCACACCCCAAGAACCATCTTTCACCCCAGCA...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTCCTTCCTGGAAGGGGTaGAAAACTCCTGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGPSWKG*KTPAGK
Trigger: TTTTCCAGCAGGAGTTTTCCACCCCTTCCAGGAAGG...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCCACCATGGCATTGCCTaGCATCCGCTGGTAAGACTG +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGHHGIA*HPLVRL
Trigger: CAGTCTTACCAGCGGATGCCAGGCAATGCCATGGTG...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGCACCTCCAGGTGGATaGGGATTAGCAGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWAPPGG*GLAVAP
Trigger: AGGAGCTACTGCTAATCCCCATCCACCTGGAGGTGC...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCGCACCTCCAGGTGGATaGGGATTAGCAGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGAPPGG*GLAVAP
Trigger: AGGAGCTACTGCTAATCCCCATCCACCTGGAGGTGC...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp GCTGAATGGCTGAGACAGGGCCAGATGCTTGCAGTACTGCAACACAAAAGCACCGCACCTCCAGGTGGATaGGGATTAGCAGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AEWLRQGQMLAVLQHKSTAPPGG*GLAVAP
Trigger: AGGAGCTACTGCTAATCCCCATCCACCTGGAGGTGC...GGTGCTTTTGTGTTGCAGTACTGCAAGCATCTGGCCCTGTCTCAGCCATTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR CCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCCTGGGTGAAGCTGAATaGCTGAGACAGGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVLGEAE*LRQGQM
Trigger: CATCTGGCCCTGTCTCAGCCATTCAGCTTCACCCAG...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGCTGGGTGAAGCTGAATaGCTGAGACAGGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWLGEAE*LRQGQM
Trigger: CATCTGGCCCTGTCTCAGCCATTCAGCTTCACCCAG...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTCCCATTTATGGGCTTaGGGTCTGGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVSHLWA*GLGYEA
Trigger: AGCCTCGTACCCCAGACCCCAAGCCCATAAATGGGA...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGTCCCATTTATGGGCTTaGGGTCTGGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWSHLWA*GLGYEA
Trigger: AGCCTCGTACCCCAGACCCCAAGCCCATAAATGGGA...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTGGAACTGGAGTTTCTTaGGAAGGGACTCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGGTGVS*EGTPMS
Trigger: AGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCCTCCTCTTCACTTGCTaGGGCATCAAAAGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVLLFTC*GIKRGS
Trigger: CGACCCTCTTTTGATGCCTCAGCAAGTGAAGAGGAG...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGCAGCGAGGTGCTTTTTaGGTAGAGCAGCATCCGGAA +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWQRGAF*VEQHPE
Trigger: TTCCGGATGCTGCTCTACTCAAAAAGCACCTCGCTG...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGACTTTGGAGTCCACCTaGGTCCATCTTCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWTLEST*VHLPPW
Trigger: CCATGGAGGAAGATGGACTCAGGTGGACTCCAAAGT...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp ACAGAGATGAGGGACCAATGCACCTCCAGGTGGATGGGGATTAGCAGTAGCTCCTCACATCAACAGAGATaGGGGACCAATGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: TEMRDQCTSRWMGISSSSSHQQR*GTNAPP
Trigger: TGGAGGTGCATTGGTCCCTCATCTCTGTTGATGTGA...GGAGCTACTGCTAATCCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR TCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGCGAGTCAAAATAGGTaGTGGTGCGTCGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWASQNR*WCVASH
Trigger: ATGTGAGGCGACGCACCATCACCTATTTTGACTCGC...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp CTTTCCAGCCCTGGTGGAAATCCAGTCGGTCTTTCTTTACCGCCTCTGCCTGTAGCGAGTCAAAATAGGTaGTGGTGCGTCGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: LSSPGGNPVGLSLPPLPVASQNR*WCVASH
Trigger: ATGTGAGGCGACGCACCATCACCTATTTTGACTCGC...TACAGGCAGAGGCGGTAAAGAAAGACCGACTGGATTTCCACCAGGGCTGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR TCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCACGAGGCTCACACAGTaGGTTTGCAGTGACACAGCT +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGTRLTQ*VCSDTA
Trigger: AGCTGTGTCACTGCAAACTCACTGTGTGAGCCTCGT...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGACGAGGCTCACACAGTaGGTTTGCAGTGACACAGCT +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWTRLTQ*VCSDTA
Trigger: AGCTGTGTCACTGCAAACTCACTGTGTGAGCCTCGT...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR GCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGCCTCTTCTGCCATaGCCAAATCTGAGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGLPLLP*PNLSPE
Trigger: TTCAGGGCTCAGATTTGGGCATGGCAGAAGAGGCAG...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGAGATGAGGGACCAATaGACCTCCAGGTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWEMRDQ*TSRWMG
Trigger: CCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTC...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR GCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTACAGGGCCAGATGCTTaGAGTACTGCAACACAAAAG +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALITGPDA*STATQK
Trigger: CTTTTGTGTTGCAGTACTGCAAGCATCTGGCCCTGT...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCAGTTTGGGCATGTCCTaGTGGGTGAAGCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVSLGMS*WVKLNG
Trigger: GCCATTCAGCTTCACCCAGCAGGACATGCCCAAACT...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR GCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGAGTTTGGGCATGTCCTaGTGGGTGAAGCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWSLGMS*WVKLNG
Trigger: GCCATTCAGCTTCACCCAGCAGGACATGCCCAAACT...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR GCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTTCTGTAGCCACCCCCTaGACATCAGAAATCAACAAG +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGSVATP*TSEINK
Trigger: CTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGA...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGCCCCAAAGCTTCCAGTaGAATGTCAGCGAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWPQSFQ*NVSEVL
Trigger: AAGCACCTCGCTGACATTCCACTGGAAGCTTTGGGG...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTACACCAGGCCCTTCCTaGAAGGGGTGGAAAACTCCT +
Preference number: 4 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWATPGPS*KGWKTP
Trigger: AGGAGTTTTCCACCCCTTCCAGGAAGGGCCTGGTGT...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTCCCCAAGTCATCCATaGTCAGCACGTGCCGCTTAT +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGSPSHP*SARAAY
Trigger: ATAAGCGGCACGTGCTGACCATGGATGACTTGGGGA...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTGCACCTCCAGGTGGATaGGGATTAGCAGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWAAPPGG*GLAVAP
Trigger: AGGAGCTACTGCTAATCCCCATCCACCTGGAGGTGC...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGCAATGCACCTCCAGGTaGATGGGGATTAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWQCTSR*MGISSS
Trigger: GCTACTGCTAATCCCCATCCACCTGGAGGTGCATTG...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCCAATGCACCTCCAGGTaGATGGGGATTAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGQCTSR*MGISSS
Trigger: GCTACTGCTAATCCCCATCCACCTGGAGGTGCATTG...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCAATGCACCTCCAGGTaGATGGGGATTAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGQCTSR*MGISSS
Trigger: GCTACTGCTAATCCCCATCCACCTGGAGGTGCATTG...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGCCTTTCCAGCCCTGGTaGAAATCCAGTCGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWPFQPW*KSSRSF
Trigger: GAAAGACCGACTGGATTTCCACCAGGGCTGGAAAGG...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000582789.5
CDS-3UTR CCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCCCTTTCCAGCCCTGGTaGAAATCCAGTCGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVPFQPW*KSSRSF
Trigger: GAAAGACCGACTGGATTTCCACCAGGGCTGGAAAGG...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000582789.5
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCCCTTTCCAGCCCTGGTaGAAATCCAGTCGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGPFQPW*KSSRSF
Trigger: GAAAGACCGACTGGATTTCCACCAGGGCTGGAAAGG...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000582789.5
CDS-3UTR CCA 90 bp ACATCAACAGAGATGAGGGACCAATGCACCTCCAGGTGGATGGGGATTAGCAGTCTGGGTGAAGCTGAATaGCTGAGACAGGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: TSTEMRDQCTSRWMGISSLGEAE*LRQGQM
Trigger: CATCTGGCCCTGTCTCAGCCATTCAGCTTCACCCAG...ACTGCTAATCCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTCTGTTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR CCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGTATGGGCTTGGGGTCTaGGGTACGAGGCTCACACAG +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWYGLGV*GTRLTQ
Trigger: CTGTGTGAGCCTCGTACCCCAGACCCCAAGCCCATA...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTGCAGTAGCTCCTTATTaGAGATGTCCACGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALIAVAPY*RCPRFW
Trigger: CCAAAAACGTGGACATCTTCAATAAGGAGCTACTGC...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGTCACATCAACAGAGATaGGGGACCAATGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWSHQQR*GTNAPP
Trigger: TGGAGGTGCATTGGTCCCTCATCTCTGTTGATGTGA...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR GCA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTCTGCCTCTTCTGCCATaGCCAAATCTGAGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWALPLLP*PNLSPE
Trigger: TTCAGGGCTCAGATTTGGGCATGGCAGAAGAGGCAG...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGTCGCACCCCCTTGCTaGGGTGAAAGATGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWVAPPC*GERWFL
Trigger: CAAGAACCATCTTTCACCCCAGCAAGGGGGTGCGAC...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCCCTTCCTGGAAGGGGTaGAAAACTCCTGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVPSWKG*KTPAGK
Trigger: TTTTCCAGCAGGAGTTTTCCACCCCTTCCAGGAAGG...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGACACCAGGCCCTTCCTaGAAGGGGTGGAAAACTCCT +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWTPGPS*KGWKTP
Trigger: AGGAGTTTTCCACCCCTTCCAGGAAGGGCCTGGTGT...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCACCTCCAGGTGGATaGGGATTAGCAGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWAPPGG*GLAVAP
Trigger: AGGAGCTACTGCTAATCCCCATCCACCTGGAGGTGC...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp ACATCAACAGAGATGAGGGACCAATGCACCTCCAGGTGGATGGGGATTAGCAGTCAATGCACCTCCAGGTaGATGGGGATTAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: TSTEMRDQCTSRWMGISSQCTSR*MGISSS
Trigger: GCTACTGCTAATCCCCATCCACCTGGAGGTGCATTG...ACTGCTAATCCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTCTGTTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR CCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGCTGGGTGAAGCTGAATaGCTGAGACAGGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWLGEAE*LRQGQM
Trigger: CATCTGGCCCTGTCTCAGCCATTCAGCTTCACCCAG...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGTCCCATTTATGGGCTTaGGGTCTGGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWSHLWA*GLGYEA
Trigger: AGCCTCGTACCCCAGACCCCAAGCCCATAAATGGGA...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGAACTGGAGTTTCTTaGGAAGGGACTCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWGTGVS*EGTPMS
Trigger: AGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp CTTTCCAGCCCTGGTGGAAATCCAGTCGGTCTTTCTTTACCGCCTCTGCCTGTAAAGATGGGAGGCAGCTaGTCATTGAGCCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LSSPGGNPVGLSLPPLPVKMGGS*SLSQFC
Trigger: ACAGAACTGGCTCAATGACCAGCTGCCTCCCATCTT...TACAGGCAGAGGCGGTAAAGAAAGACCGACTGGATTTCCACCAGGGCTGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR TCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTAGGCTGCCATACGTTTaGAGGAATTCGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGRLPYV*RNSSKM
Trigger: CATCTTGGACGAATTCCTTCAAACGTATGGCAGCCT...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR TCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCGAGTCAAAATAGGTaGTGGTGCGTCGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWASQNR*WCVASH
Trigger: ATGTGAGGCGACGCACCATCACCTATTTTGACTCGC...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGACGAGGCTCACACAGTaGGTTTGCAGTGACACAGCT +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWTRLTQ*VCSDTA
Trigger: AGCTGTGTCACTGCAAACTCACTGTGTGAGCCTCGT...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGCAAAGGATCCTTTATTaGCCAGAGCAGGACCGTGGC +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWQRILY*PEQDRG
Trigger: GCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTG...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp GGCCACATTCATTTTGAAGTAACCTTTCCAGCCCTGGTGGAAATCCAGTCGGTCGAGGCAGCTGGTCATTaGGCCAGTTCTGTCCATACA +
Preference number: 4 (lower is better)
Translates to: GHIHFEVTFPALVEIQSVEAAGH*ASSVHT
Trigger: TGTATGGACAGAACTGGCTCAATGACCAGCTGCCTC...GACCGACTGGATTTCCACCAGGGCTGGAAAGGTTACTTCAAAATGAATGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR GCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCGGAATGTCAGCGAGGTaGTTTTTGAGTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGGMSAR*FLSRAA
Trigger: TGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCC...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTCACTGTCATTATTCTaGCTGGCCACATTCATTTTG +
Preference number: 4 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGSLSLF*LATFIL
Trigger: CAAAATGAATGTGGCCAGGCAGAATAATGACAGTGA...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR GCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCACAGGGCCAGATGCTTaGAGTACTGCAACACAAAAG +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVTGPDA*STATQK
Trigger: CTTTTGTGTTGCAGTACTGCAAGCATCTGGCCCTGT...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR GCA 90 bp CTCCTTGTAGATCTGCCGACGAAGTTTGGGCATGTCCTGCTGGGTGAAGCTGAAACAGGGCCAGATGCTTaGAGTACTGCAACACAAAAG +
Preference number: 4 (lower is better)
Translates to: LLVDLPTKFGHVLLGEAETGPDA*STATQK
Trigger: CTTTTGTGTTGCAGTACTGCAAGCATCTGGCCCTGT...TTCAGCTTCACCCAGCAGGACATGCCCAAACTTCGTCGGCAGATCTACAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR GCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGAGTTTGGGCATGTCCTaGTGGGTGAAGCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWSLGMS*WVKLNG
Trigger: GCCATTCAGCTTCACCCAGCAGGACATGCCCAAACT...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR GCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTCTGTAGCCACCCCCTaGACATCAGAAATCAACAAG +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGSVATP*TSEINK
Trigger: CTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGA...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000581093.1
ENST00000582789.5
CDS-3UTR GCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGTCTGTAGCCACCCCCTaGACATCAGAAATCAACAAG +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWSVATP*TSEINK
Trigger: CTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGA...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000581093.1
ENST00000582789.5
CDS-3UTR GCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTCTGTAGCCACCCCCTaGACATCAGAAATCAACAAG +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVSVATP*TSEINK
Trigger: CTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGA...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CCA 90 bp GGCCACATTCATTTTGAAGTAACCTTTCCAGCCCTGGTGGAAATCCAGTCGGTCTCCCCAAGTCATCCATaGTCAGCACGTGCCGCTTAT +
Preference number: 4 (lower is better)
Translates to: GHIHFEVTFPALVEIQSVSPSHP*SARAAY
Trigger: ATAAGCGGCACGTGCTGACCATGGATGACTTGGGGA...GACCGACTGGATTTCCACCAGGGCTGGAAAGGTTACTTCAAAATGAATGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR CCA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTCCCCATCATAACCCTTaGTACGGAGTTTATCATAGA +
Preference number: 4 (lower is better)
Translates to: EDLAGSDPIVRPPPPALIPHHNP*YGVYHR
Trigger: TCTATGATAAACTCCGTACCAAGGGTTATGATGGGG...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGCAATGCACCTCCAGGTaGATGGGGATTAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWQCTSR*MGISSS
Trigger: GCTACTGCTAATCCCCATCCACCTGGAGGTGCATTG...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp CTTTTCTGTAGCCACCCCCTGCACATCAGAAATCAACAAGTATTCTCTCAAAGAACCCTCCACCTGACTTaGGTCGGGGTTTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LFCSHPLHIRNQQVFSQRTLHLT*VGVWEV
Trigger: CACCTCCCAAACCCCGACTCAAGTCAGGTGGAGGGT...TCTTTGAGAGAATACTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp CTTTTCTGTAGCCACCCCCTGCACATCAGAAATCAACAAGTATTCTCTCAAAGATCGGCGGCGGCGCTGTaGGCAGGTTTTTCGATGAGT +
Preference number: 4 (lower is better)
Translates to: LFCSHPLHIRNQQVFSQRSAAAL*AGFSMS
Trigger: ACTCATCGAAAAACCTGCTCACAGCGCCGCCGCCGA...TCTTTGAGAGAATACTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGCCACATTCATTTTaGAGTAACCTTTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVWPHSF*SNLSSP
Trigger: AGGGCTGGAAAGGTTACTTCAAAATGAATGTGGCCA...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR TCA 90 bp ATATATATATATAAAAGTTTGAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCGGGGAAGGGGGAGGATaGCTGCTCCACCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: IYIYKSLKIWQAVILLSAGEGGG*LLHPGH
Trigger: GTGGCCTGGGTGGAGCAGTCATCCTCCCCCTTCCCC...GGCGGACAATAGGATCACTGCCTGCCAGATCTTCAAACTTTTATATATATATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCGCTTGCAGTACATTTTaGAGTAACCTTTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVACSTF*SNLSSP
Trigger: AGGGCTGGAAAGGTTACTTCAAAATGTACTGCAAGC...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582789.5
CDS-3UTR GCA 90 bp AACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTATATGGTTCTTGGGGTGTaGGAGGCCCCGCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: NKGSFIDQSRTVAFIYFYMVLGV*EAPPPA
Trigger: GGCCGGCGGCGGGGCCTCGCACACCCCAAGAACCAT...ATAAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCAGATGCTTGCAGTACTaGAACACAAAAGCACCACAG +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVRCLQY*NTKAPQ
Trigger: CTGTGGTGCTTTTGTGTTGCAGTACTGCAAGCATCT...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR GCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTAGATGCTTGCAGTACTaGAACACAAAAGCACCACAG +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGRCLQY*NTKAPQ
Trigger: CTGTGGTGCTTTTGTGTTGCAGTACTGCAAGCATCT...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR GCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGAGATGCTTGCAGTACTaGAACACAAAAGCACCACAG +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWRCLQY*NTKAPQ
Trigger: CTGTGGTGCTTTTGTGTTGCAGTACTGCAAGCATCT...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp CTTTTCTGTAGCCACCCCCTGCACATCAGAAATCAACAAGTATTCTCTCAAAGACAGCTGACTCCATCTTaGGGGCAGCCTCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LFCSHPLHIRNQQVFSQRQLTPS*GQPPSC
Trigger: GCAGCTTGGAGGCTGCCCCCAAGATGGAGTCAGCTG...TCTTTGAGAGAATACTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTTCCGGAAGGCTCTCATaGCTCGGCGGCGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFSGRLS*LGGGAV
Trigger: CACAGCGCCGCCGCCGAGCCATGAGAGCCTTCCGGA...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp CTTTTCTGTAGCCACCCCCTGCACATCAGAAATCAACAAGTATTCTCTCAAAGAGTGAAAGATGGTTCTTaGGGTGTGCGAGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LFCSHPLHIRNQQVFSQRVKDGS*GVRGPA
Trigger: GGCGGGGCCTCGCACACCCCAAGAACCATCTTTCAC...TCTTTGAGAGAATACTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp AACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTATCGCAGGGGGCTGTGCTaGCCGGCTTTCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: NKGSFIDQSRTVAFIYFYRRGLC*PAFSPG
Trigger: GCCTGGGGAGAAAGCCGGCCAGCACAGCCCCCTGCG...ATAAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp ACAGAGATGAGGGACCAATGCACCTCCAGGTGGATGGGGATTAGCAGTAGCTCCCCCCATCATAACCCTTaGTACGGAGTTTATCATAGA +
Preference number: 4 (lower is better)
Translates to: TEMRDQCTSRWMGISSSSPHHNP*YGVYHR
Trigger: TCTATGATAAACTCCGTACCAAGGGTTATGATGGGG...GGAGCTACTGCTAATCCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTCTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR CCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGGAACTGGAGTTTCTTaGGAAGGGACTCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWGTGVS*EGTPMS
Trigger: AGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR TCA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGCCACATTCATTTTaGAGTAACCTTTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWAWPHSF*SNLSSP
Trigger: AGGGCTGGAAAGGTTACTTCAAAATGAATGTGGCCA...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR TCA 90 bp AACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTATGGGGAAGGGGGAGGATaGCTGCTCCACCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: NKGSFIDQSRTVAFIYFYGEGGG*LLHPGH
Trigger: GTGGCCTGGGTGGAGCAGTCATCCTCCCCCTTCCCC...ATAAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTTCTCGCAGGGGGCTGTaGTGGCCGGCTTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFSRRGL*WPAFSP
Trigger: TGGGGAGAAAGCCGGCCAGCACAGCCCCCTGCGAGA...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTAAACTATTGAAGAAATaGACCTTTTCAGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGKLLKK*TFSGTV
Trigger: CACAGTCCCTGAAAAGGTGCATTTCTTCAATAGTTT...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp GATGGTGCGTCGCCTCACATCAACAGAGATGAGGGACCAATGCACCTCCAGGTGAAACTATTGAAGAAATaGACCTTTTCAGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: DGASPHINRDEGPMHLQVKLLKK*TFSGTV
Trigger: CACAGTCCCTGAAAAGGTGCATTTCTTCAATAGTTT...CACCTGGAGGTGCATTGGTCCCTCATCTCTGTTGATGTGAGGCGACGCACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR GCA 90 bp CTTTTCTGTAGCCACCCCCTGCACATCAGAAATCAACAAGTATTCTCTCAAAGAGAGATGAGGGACCAATaGACCTCCAGGTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: LFCSHPLHIRNQQVFSQREMRDQ*TSRWMG
Trigger: CCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTC...TCTTTGAGAGAATACTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000581093.1
CDS-3UTR GCA 90 bp ACATCAACAGAGATGAGGGACCAATGCACCTCCAGGTGGATGGGGATTAGCAGTAGATGCTTGCAGTACTaGAACACAAAAGCACCACAG +
Preference number: 4 (lower is better)
Translates to: TSTEMRDQCTSRWMGISSRCLQY*NTKAPQ
Trigger: CTGTGGTGCTTTTGTGTTGCAGTACTGCAAGCATCT...ACTGCTAATCCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTCTGTTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR GCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGACAGGGCCAGATGCTTaGAGTACTGCAACACAAAAG +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWTGPDA*STATQK
Trigger: CTTTTGTGTTGCAGTACTGCAAGCATCTGGCCCTGT...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGTACATGTTCATCACCTaGTCATTGAGCCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWYMFIT*SLSQFC
Trigger: ACAGAACTGGCTCAATGACCAGGTGATGAACATGTA...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTTACATGTTCATCACCTaGTCATTGAGCCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGYMFIT*SLSQFC
Trigger: ACAGAACTGGCTCAATGACCAGGTGATGAACATGTA...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTACATGTTCATCACCTaGTCATTGAGCCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGYMFIT*SLSQFC
Trigger: ACAGAACTGGCTCAATGACCAGGTGATGAACATGTA...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR TCA 90 bp GACCAATGCACCTCCAGGTGGATGGGGATTAGCAGTAGCTCCTTATTGAAGATGGCAGTAGCTCCTTATTaGAGATGTCCACGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: DQCTSRWMGISSSSLLKMAVAPY*RCPRFW
Trigger: CCAAAAACGTGGACATCTTCAATAAGGAGCTACTGC...CATCTTCAATAAGGAGCTACTGCTAATCCCCATCCACCTGGAGGTGCATTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR GCA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTCACTGTCATTATTCTaGCTGGCCACATTCATTTTG +
Preference number: 4 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVSLSLF*LATFIL
Trigger: CAAAATGAATGTGGCCAGGCAGAATAATGACAGTGA...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CCA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTAGGTTTTTCGATGAGTaGGGCGGGAAGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFRFFDE*GGKGGA
Trigger: GGCCCCGCCCTTCCCGCCCCACTCATCGAAAAACCT...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCAAAAGTTTGAAGATCTaGCAGGCAGTGATCCTATTG +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGKSLKI*QAVILL
Trigger: CAATAGGATCACTGCCTGCCAGATCTTCAAACTTTT...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTTCGGCGGCGGCGCTGTaGGCAGGTTTTTCGATGAGT +
Preference number: 4 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFSAAAL*AGFSMS
Trigger: ACTCATCGAAAAACCTGCTCACAGCGCCGCCGCCGA...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTAGTAAGCTGGGGGTATaGCGGGTCCAGGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFSKLGV*RVQEAQ
Trigger: CTGAGCCTCCTGGACCCGGCATACCCCCAGCTTACT...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTCTCCCCAGGCCTCTCTaGCTCTTCTGCCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFLPRPL*LFCHAQ
Trigger: TTGGGCATGGCAGAAGAGGCAGAGAGGCCTGGGGAG...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTCACTGTCATTATTCTaGCTGGCCACATTCATTTTG +
Preference number: 4 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWASLSLF*LATFIL
Trigger: CAAAATGAATGTGGCCAGGCAGAATAATGACAGTGA...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR GCA 90 bp TCCACCTTTTCACCCCATCATAACCCTTGGTACGGAGTTTATCATAGAAGAAACAGTTTGGGCATGTCCTaGTGGGTGAAGCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: STFSPHHNPWYGVYHRRNSLGMS*WVKLNG
Trigger: GCCATTCAGCTTCACCCAGCAGGACATGCCCAAACT...GTTTCTTCTATGATAAACTCCGTACCAAGGGTTATGATGGGGTGAAAAGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR CCA 90 bp ATATATATATATAAAAGTTTGAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCGAAGACGCTCCCGCCTaGGACTTGAGTAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: IYIYKSLKIWQAVILLSAEDAPA*DLSKLG
Trigger: CCCCAGCTTACTCAAGTCCCAGGCGGGAGCGTCTTC...GGCGGACAATAGGATCACTGCCTGCCAGATCTTCAAACTTTTATATATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp ATATATATATATAAAAGTTTGAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCAGCTGACTCCATCTTaGGGGCAGCCTCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: IYIYKSLKIWQAVILLSAQLTPS*GQPPSC
Trigger: GCAGCTTGGAGGCTGCCCCCAAGATGGAGTCAGCTG...GGCGGACAATAGGATCACTGCCTGCCAGATCTTCAAACTTTTATATATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp CTTTTCTGTAGCCACCCCCTGCACATCAGAAATCAACAAGTATTCTCTCAAAGAGTCCAGAGGAGACTTTaGAGTCCACCTGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LFCSHPLHIRNQQVFSQRVQRRL*SPPESI
Trigger: GATGGACTCAGGTGGACTCCAAAGTCTCCTCTGGAC...TCTTTGAGAGAATACTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTGGAAGCCCCTCACCATaGCATTGCCTGGCATCCGCT +
Preference number: 4 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFGSPSP*HCLASA
Trigger: AGCGGATGCCAGGCAATGCCATGGTGAGGGGCTTCC...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp TTTCACCCCATCATAACCCTTGGTACGGAGTTTATCATAGAAGAAACTATTGAAGAGATGAGGGACCAATaGACCTCCAGGTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: FHPIITLGTEFIIEETIEEMRDQ*TSRWMG
Trigger: CCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTC...TTCAATAGTTTCTTCTATGATAAACTCCGTACCAAGGGTTATGATGGGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR GCA 90 bp GGCCACATTCATTTTGAAGTAACCTTTCCAGCCCTGGTGGAAATCCAGTCGGTCTCACTGTCATTATTCTaGCTGGCCACATTCATTTTG +
Preference number: 4 (lower is better)
Translates to: GHIHFEVTFPALVEIQSVSLSLF*LATFIL
Trigger: CAAAATGAATGTGGCCAGGCAGAATAATGACAGTGA...GACCGACTGGATTTCCACCAGGGCTGGAAAGGTTACTTCAAAATGAATGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR CCA 90 bp CTTTTCTGTAGCCACCCCCTGCACATCAGAAATCAACAAGTATTCTCTCAAAGAGGAACTGGAGTTTCTTaGGAAGGGACTCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: LFCSHPLHIRNQQVFSQRGTGVS*EGTPMS
Trigger: AGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC...TCTTTGAGAGAATACTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000581093.1
CDS-3UTR CCA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGAAAAGTTTGAAGATCTaGCAGGCAGTGATCCTATTG +
Preference number: 4 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWKSLKI*QAVILL
Trigger: CAATAGGATCACTGCCTGCCAGATCTTCAAACTTTT...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTACCAGAGCAGGACCGTaGCATTTATATATTTTTATA +
Preference number: 4 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGTRAGP*HLYIFI
Trigger: TATAAAAATATATAAATGCCACGGTCCTGCTCTGGT...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCACCAGAGCAGGACCGTaGCATTTATATATTTTTATA +
Preference number: 4 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGTRAGP*HLYIFI
Trigger: TATAAAAATATATAAATGCCACGGTCCTGCTCTGGT...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTCCCAAATCTGAGCCCTaGAAAAGCTCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFPKSEP*KSSWAT
Trigger: TGTGGCCCAGGAGCTTTTTCAGGGCTCAGATTTGGG...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp CTTTTCTGTAGCCACCCCCTGCACATCAGAAATCAACAAGTATTCTCTCAAAGAGGAATGTCAGCGAGGTaGTTTTTGAGTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LFCSHPLHIRNQQVFSQRGMSAR*FLSRAA
Trigger: TGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCC...TCTTTGAGAGAATACTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp AACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTATGAGATGAGGGACCAATaGACCTCCAGGTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: NKGSFIDQSRTVAFIYFYEMRDQ*TSRWMG
Trigger: CCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTC...ATAAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTTGCTGGGGTGAAAGATaGTTCTTGGGGTGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFCWGER*FLGCAR
Trigger: CCTCGCACACCCCAAGAACCATCTTTCACCCCAGCA...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp ATATATATATATAAAAGTTTGAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCATGGCATTGCCTaGCATCCGCTGGTAAGACTG +
Preference number: 4 (lower is better)
Translates to: IYIYKSLKIWQAVILLSAHHGIA*HPLVRL
Trigger: CAGTCTTACCAGCGGATGCCAGGCAATGCCATGGTG...GGCGGACAATAGGATCACTGCCTGCCAGATCTTCAAACTTTTATATATATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp CTTTTCTGTAGCCACCCCCTGCACATCAGAAATCAACAAGTATTCTCTCAAAGATGGCCACATTCATTTTaGAGTAACCTTTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LFCSHPLHIRNQQVFSQRWPHSF*SNLSSP
Trigger: AGGGCTGGAAAGGTTACTTCAAAATGAATGTGGCCA...TCTTTGAGAGAATACTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp TCCACCTTTTCACCCCATCATAACCCTTGGTACGGAGTTTATCATAGAAGAAACTGGCCACATTCATTTTaGAGTAACCTTTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: STFSPHHNPWYGVYHRRNWPHSF*SNLSSP
Trigger: AGGGCTGGAAAGGTTACTTCAAAATGAATGTGGCCA...GTTTCTTCTATGATAAACTCCGTACCAAGGGTTATGATGGGGTGAAAAGGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR TCA 90 bp ATATATATATATAAAAGTTTGAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCAAAGGATCCTTTATTaGCCAGAGCAGGACCGTGGC +
Preference number: 4 (lower is better)
Translates to: IYIYKSLKIWQAVILLSAQRILY*PEQDRG
Trigger: GCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTG...GGCGGACAATAGGATCACTGCCTGCCAGATCTTCAAACTTTTATATATATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp AACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTATTCCCATTTATGGGCTTaGGGTCTGGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: NKGSFIDQSRTVAFIYFYSHLWA*GLGYEA
Trigger: AGCCTCGTACCCCAGACCCCAAGCCCATAAATGGGA...ATAAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR TCA 90 bp AACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTATCTCCTCTTCACTTGCTaGGGCATCAAAAGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: NKGSFIDQSRTVAFIYFYLLFTC*GIKRGS
Trigger: CGACCCTCTTTTGATGCCTCAGCAAGTGAAGAGGAG...ATAAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp AACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTATGTCCAGAGGAGACTTTaGAGTCCACCTGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: NKGSFIDQSRTVAFIYFYVQRRL*SPPESI
Trigger: GATGGACTCAGGTGGACTCCAAAGTCTCCTCTGGAC...ATAAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTGTCCCCCAAAACCGTTaGGCAGAGTACATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFVPQNR*AEYMKG
Trigger: TCCTTTCATGTACTCTGCCCAACGGTTTTGGGGGAC...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp ATATATATATATAAAAGTTTGAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCCTTCCTGGAAGGGGTaGAAAACTCCTGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: IYIYKSLKIWQAVILLSAPSWKG*KTPAGK
Trigger: TTTTCCAGCAGGAGTTTTCCACCCCTTCCAGGAAGG...GGCGGACAATAGGATCACTGCCTGCCAGATCTTCAAACTTTTATATATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp AACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTATTCCCCAAGTCATCCATaGTCAGCACGTGCCGCTTAT +
Preference number: 4 (lower is better)
Translates to: NKGSFIDQSRTVAFIYFYSPSHP*SARAAY
Trigger: ATAAGCGGCACGTGCTGACCATGGATGACTTGGGGA...ATAAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp TTTCACCCCATCATAACCCTTGGTACGGAGTTTATCATAGAAGAAACTATTGAATACATGTTCATCACCTaGGGAGAAGATGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FHPIITLGTEFIIEETIEYMFIT*GEDGRQ
Trigger: CTGCCTCCCATCTTCTCCCCAGGTGATGAACATGTA...TTCAATAGTTTCTTCTATGATAAACTCCGTACCAAGGGTTATGATGGGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR TCA 90 bp ATATATATATATAAAAGTTTGAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCAGGCTGCCATACGTTTaGAGGAATTCGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: IYIYKSLKIWQAVILLSARLPYV*RNSSKM
Trigger: CATCTTGGACGAATTCCTTCAAACGTATGGCAGCCT...GGCGGACAATAGGATCACTGCCTGCCAGATCTTCAAACTTTTATATATATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR GCA 90 bp CTTTTCTGTAGCCACCCCCTGCACATCAGAAATCAACAAGTATTCTCTCAAAGAAAACTATTGAAGAAATaGACCTTTTCAGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: LFCSHPLHIRNQQVFSQRKLLKK*TFSGTV
Trigger: CACAGTCCCTGAAAAGGTGCATTTCTTCAATAGTTT...TCTTTGAGAGAATACTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CCA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTCCCCATCATAACCCTTaGTACGGAGTTTATCATAGA +
Preference number: 4 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFPHHNP*YGVYHR
Trigger: TCTATGATAAACTCCGTACCAAGGGTTATGATGGGG...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS GCA 90 bp AGGCGCAGCCGTCTCAATTCAGGATTCCAACGCTTCTGGGCCGCGTaGCGCGCCGCCGAGCACCCCGCCGCGCCGCCTCTGGCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: RRSRLNSGFQRFWAA*RAAEHPAAPPLALL
Trigger: AAGCAGAGCCAGAGGCGGCGCGGCGGGGTGCTCGGCGGCGCGGCACGCGGCCCAGAAGCGTTGGAATCCTGAATTGAGACGGCTGCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321337.12
CDS CCA 90 bp GCTGTCTTTAGGCGCAGCCGTCTCAATTCAGGATTCCAACGCTTCTaGGCCGCGTGCCGCGCCGCCGAGCACCCCGCCGCGCCGCCTCTG +
Preference number: 5 (lower is better)
Translates to: AVFRRSRLNSGFQRF*AACRAAEHPAAPPL
Trigger: CAGAGGCGGCGCGGCGGGGTGCTCGGCGGCGCGGCACGCGGCCCAGAAGCGTTGGAATCCTGAATTGAGACGGCTGCGCCTAAAGACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321337.12
CDS CCA 90 bp CTCTCATGGCTCGGCGGCGGCGCTGTGAGCAGGTTTTTCGATGAGTaGGGCGGGAAGGGCGGGGCCGCTGGGAGGTTCCCAGCTGACTCC +
Preference number: 5 (lower is better)
Translates to: LSWLGGGAVSRFFDE*GGKGGAAGRFPADS
Trigger: GGAGTCAGCTGGGAACCTCCCAGCGGCCCCGCCCTTCCCGCCCCACTCATCGAAAAACCTGCTCACAGCGCCGCCGCCGAGCCATGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS TCA 90 bp CTGTGGTCCCTGACCCAGGATCTGGCCCAAACCCTCCACCTGACTTaGGTCGGGGTTTGGGAGGTGGGGGCCAACGAAGACGCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: LWSLTQDLAQTLHLT*VGVWEVGANEDAPA
Trigger: GGCGGGAGCGTCTTCGTTGGCCCCCACCTCCCAAACCCCGACTCAAGTCAGGTGGAGGGTTTGGGCCAGATCCTGGGTCAGGGACCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS TCA 90 bp GTGGCGCCCCCAAAGCTTCCAGTGGAATGTCAGCGAGGTGCTTTTTaGGTAGAGCAGCATCCGGAAGGCTCTCATGGCTCGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: VAPPKLPVECQRGAF*VEQHPEGSHGSAAA
Trigger: CGCCGCCGCCGAGCCATGAGAGCCTTCCGGATGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCCACTGGAAGCTTTGGGGGCGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGCAGGCAGTGATCCTATaGTCCGCCCACCACCCCCAG +
Preference number: 5 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGQAVIL*SAHHPQ
Trigger: CTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTG...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS GCA 90 bp GCACGTGCCGCTTATAAGCCACTCGGAAGCCCCTCACCATGGCATTaGCTGGCATCCGCTGGTAAGACTGGATCAGCTGCAACACCAGGC +
Preference number: 5 (lower is better)
Translates to: ARAAYKPLGSPSPWH*LASAGKTGSAATPG
Trigger: GCCTGGTGTTGCAGCTGATCCAGTCTTACCAGCGGATGCCAGGCAATGCCATGGTGAGGGGCTTCCGAGTGGCTTATAAGCGGCACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000580997.1
ENST00000583277.1
CDS GCA 90 bp GTCTCCATACATGTTCATCACCTGGGGAGAAGATGGGAGGCAGCTTaGCATGGAGGGTGCGGCATGGGTACAGGGCTCCCCCATGCAGAG +
Preference number: 5 (lower is better)
Translates to: VSIHVHHLGRRWEAA*HGGCGMGTGLPHAE
Trigger: CTCTGCATGGGGGAGCCCTGTACCCATGCCGCACCCTCCATGGCAAGCTGCCTCCCATCTTCTCCCCAGGTGATGAACATGTATGGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583277.1
CDS-3UTR CAA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTGCTCCCGCCTGGGACTaGAGTAAGCTGGGGGTATGC +
Preference number: 5 (lower is better)
Translates to: EDLAGSDPIVRPPPPALIAPAWD*SKLGVC
Trigger: GCATACCCCCAGCTTACTCAAGTCCCAGGCGGGAGC...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTGACTTGAGTCGGGGTTaGGGAGGTGGGGGCCAACGA +
Preference number: 5 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGDLSRG*GGGGQR
Trigger: TCGTTGGCCCCCACCTCCCAAACCCCGACTCAAGTC...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTGGTGAAAGATGGTTCTaGGGGTGTGCGAGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: EDLAGSDPIVRPPPPALIGERWF*GCARPR
Trigger: GCGGGGCCTCGCACACCCCAAGAACCATCTTTCACC...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS TCA 90 bp ATCTTCATCCTCCTCCTCCTCCTCTTCTTCCTCCTCTTCACTTGCTaGGGCATCAAAAGAGGGTCGGGGGACAGGGAGGCGTCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: IFILLLLLFFLLFTC*GIKRGSGDREASGW
Trigger: CCAGCCAGACGCCTCCCTGTCCCCCGACCCTCTTTTGATGCCTCAGCAAGTGAAGAGGAGGAAGAAGAGGAGGAGGAGGAGGATGAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS CCA 90 bp TGGTCAGCACGTGCCGCTTATAAGCCACTCGGAAGCCCCTCACCATaGCATTGCCTGGCATCCGCTGGTAAGACTGGATCAGCTGCAACA +
Preference number: 5 (lower is better)
Translates to: WSARAAYKPLGSPSP*HCLASAGKTGSAAT
Trigger: TGTTGCAGCTGATCCAGTCTTACCAGCGGATGCCAGGCAATGCCATGGTGAGGGGCTTCCGAGTGGCTTATAAGCGGCACGTGCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000580997.1
ENST00000583277.1
CDS-3UTR CAA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTAACCCTCCACCTGACTaGAGTCGGGGTTTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: EDLAGSDPIVRPPPPALINPPPD*SRGLGG
Trigger: ACCTCCCAAACCCCGACTCAAGTCAGGTGGAGGGTT...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTTTCCCATTTATGGGCTaGGGGTCTGGGGTACGAGGC +
Preference number: 5 (lower is better)
Translates to: EDLAGSDPIVRPPPPALIFPFMG*GSGVRG
Trigger: GCCTCGTACCCCAGACCCCAAGCCCATAAATGGGAA...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCCCCTTCTGGCCCAGATaGTCCCCCAAAACCGTTGGG +
Preference number: 5 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGPFWPR*SPKTVG
Trigger: CCCAACGGTTTTGGGGGACAATCTGGGCCAGAAGGG...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTCCGATGCTGCACACATaGCTGATGAGGATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGPMLHT*LMRMLA
Trigger: TGCCAGCATCCTCATCAGCAATGTGTGCAGCATCGG...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGAGGAACTGGAGTTTCTaGGGAAGGGACTCCCATGTC +
Preference number: 5 (lower is better)
Translates to: LGKGLPCLPSHLWAWGLGRNWSF*GRDSHV
Trigger: GACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCT...CCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS CCA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATaGGCTTGGGGTCTGGGGTACGAGGCTCACACAGTGAGTTTGCAG +
Preference number: 5 (lower is better)
Translates to: LEFLGKGLPCLPSHL*AWGLGYEAHTVSLQ
Trigger: CTGCAAACTCACTGTGTGAGCCTCGTACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581010.1
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CAA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTTCAGCGAGGTGCTTTTaGAGTAGAGCAGCATCCGGA +
Preference number: 5 (lower is better)
Translates to: EDLAGSDPIVRPPPPALISARCF*SRAASG
Trigger: TCCGGATGCTGCTCTACTCAAAAAGCACCTCGCTGA...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCATCTGCCGACGAAGTTaGGGCATGTCCTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGICRRS*GMSCWV
Trigger: CACCCAGCAGGACATGCCCAAACTTCGTCGGCAGAT...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CAA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTATCTGCCGACGAAGTTaGGGCATGTCCTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGICRRS*GMSCWV
Trigger: CACCCAGCAGGACATGCCCAAACTTCGTCGGCAGAT...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CAA 90 bp CTTTCCAGCCCTGGTGGAAATCCAGTCGGTCTTTCTTTACCGCCTCTGCCTGTAATCTGCCGACGAAGTTaGGGCATGTCCTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LSSPGGNPVGLSLPPLPVICRRS*GMSCWV
Trigger: CACCCAGCAGGACATGCCCAAACTTCGTCGGCAGAT...TACAGGCAGAGGCGGTAAAGAAAGACCGACTGGATTTCCACCAGGGCTGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR CAA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTCCCATTTATGGGCTaGGGGTCTGGGGTACGAGGC +
Preference number: 5 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGFPFMG*GSGVRG
Trigger: GCCTCGTACCCCAGACCCCAAGCCCATAAATGGGAA...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CAA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGTTCCCATTTATGGGCTaGGGGTCTGGGGTACGAGGC +
Preference number: 5 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWFPFMG*GSGVRG
Trigger: GCCTCGTACCCCAGACCCCAAGCCCATAAATGGGAA...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CAA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTTTCCCATTTATGGGCTaGGGGTCTGGGGTACGAGGC +
Preference number: 5 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGFPFMG*GSGVRG
Trigger: GCCTCGTACCCCAGACCCCAAGCCCATAAATGGGAA...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CAA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTCTTCCTCCTCTTCACTaGCTGAGGCATCAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: EDLAGSDPIVRPPPPALILPPLH*LRHQKR
Trigger: CCTCTTTTGATGCCTCAGCAAGTGAAGAGGAGGAAG...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTATCTGCCGACGAAGTTaGGGCATGTCCTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWAICRRS*GMSCWV
Trigger: CACCCAGCAGGACATGCCCAAACTTCGTCGGCAGAT...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CAA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGACAGGGCCAGATGCTaGCAGTACTTAGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWDRARC*QYLGQR
Trigger: CCGCTGCCCTAAGTACTGCAAGCATCTGGCCCTGTC...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581093.1
CDS CCA 90 bp AGGCCTATAGGGCAGGGGAAATGGAATGGGCATGAGAGACTGGCCTaGGGAAAGCACAATGGGATGCACACAGTTGACTCATGCATGCAA +
Preference number: 5 (lower is better)
Translates to: RPIGQGKWNGHERLA*GKHNGMHTVDSCMQ
Trigger: TTGCATGCATGAGTCAACTGTGTGCATCCCATTGTGCTTTCCCCAGGCCAGTCTCTCATGCCCATTCCATTTCCCCTGCCCTATAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583277.1
CDS-3UTR CAA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTTCAGCGAGGTGCTTTTaGAGTAGAGCAGCATCCGGA +
Preference number: 5 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGSARCF*SRAASG
Trigger: TCCGGATGCTGCTCTACTCAAAAAGCACCTCGCTGA...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTGAGGCTGCCATACGTTaGAAGGAATTCGTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: EDLAGSDPIVRPPPPALIEAAIR*KEFVQD
Trigger: ATCTTGGACGAATTCCTTCAAACGTATGGCAGCCTC...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp GAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCCACCACCCCCAGCACTGATTTCTGCCTGTAGATACTaGGCAATATGCTTAGGGCAG +
Preference number: 5 (lower is better)
Translates to: EDLAGSDPIVRPPPPALISACRY*AICLGQ
Trigger: CTGCCCTAAGCATATTGCCAAGTATCTACAGGCAGA...AATCAGTGCTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTGCCAGATCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp TTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCTGGGGTTCTGCCTGTAGATACTaGGCAATATGCTTAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LGRDSHVSLPIYGLGVWGSACRY*AICLGQ
Trigger: CTGCCCTAAGCATATTGCCAAGTATCTACAGGCAGA...ACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000582789.5
CDS-3UTR CAA 90 bp GATGGTGCGTCGCCTCACATCAACAGAGATGAGGGACCAATGCACCTCCAGGTGTCTGCCTGTAGATACTaGGCAATATGCTTAGGGCAG +
Preference number: 5 (lower is better)
Translates to: DGASPHINRDEGPMHLQVSACRY*AICLGQ
Trigger: CTGCCCTAAGCATATTGCCAAGTATCTACAGGCAGA...CACCTGGAGGTGCATTGGTCCCTCATCTCTGTTGATGTGAGGCGACGCACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR CAA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGATCTGCCGACGAAGTTaGGGCATGTCCTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWICRRS*GMSCWV
Trigger: CACCCAGCAGGACATGCCCAAACTTCGTCGGCAGAT...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CAA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCAGGAACTGGAGTTTCTaGGGAAGGGACTCCCATGTC +
Preference number: 5 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGRNWSF*GRDSHV
Trigger: GACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCT...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS-3UTR CAA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTAGGAACTGGAGTTTCTaGGGAAGGGACTCCCATGTC +
Preference number: 5 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGRNWSF*GRDSHV
Trigger: GACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCT...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS TCA 90 bp ACCAGGCCCTTCCTGAGTAGGCCAAGGGTGGAGTCACACAAAAGATaGTGCAGCTGGGGCACACAGAAATACCTACTACTCCCTGGAATA +
Preference number: 5 (lower is better)
Translates to: TRPFLSRPRVESHKR*CSWGTQKYLLLPGI
Trigger: TATTCCAGGGAGTAGTAGGTATTTCTGTGTGCCCCAGCTGCATCATCTTTTGTGTGACTCCACCCTTGGCCTACTCAGGAAGGGCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583277.1
CDS-3UTR CAA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGCCAGGACCCGGTCCCTaGTATAGTCTCTTTCATCTT +
Preference number: 5 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWPGPGP*YSLFHL
Trigger: AAGATGAAAGAGACTATACAAGGGACCGGGTCCTGG...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCCAGGACCCGGTCCCTaGTATAGTCTCTTTCATCTT +
Preference number: 5 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGPGPGP*YSLFHL
Trigger: AAGATGAAAGAGACTATACAAGGGACCGGGTCCTGG...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp GGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCCTTCCTCCTCTTCACTaGCTGAGGCATCAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: GTGVSWEGTPMSPFPFMGLPPLH*LRHQKR
Trigger: CCTCTTTTGATGCCTCAGCAAGTGAAGAGGAGGAAG...GCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGCCGATGCTGCACACATaGCTGATGAGGATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWPMLHT*LMRMLA
Trigger: TGCCAGCATCCTCATCAGCAATGTGTGCAGCATCGG...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp AGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTCGACAGGGCCAGATGCTaGCAGTACTGCAACACAAAA +
Preference number: 5 (lower is better)
Translates to: SFLGRDSHVSLPIYGLGVDRARC*QYCNTK
Trigger: TTTTGTGTTGCAGTACTGCAAGCATCTGGCCCTGTC...GACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CAA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTGACAGGGCCAGATGCTaGCAGTACTGCAACACAAAA +
Preference number: 5 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGDRARC*QYCNTK
Trigger: TTTTGTGTTGCAGTACTGCAAGCATCTGGCCCTGTC...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CAA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTAGGAACTGGAGTTTCTaGGGAAGGGACTCCCATGTC +
Preference number: 5 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWARNWSF*GRDSHV
Trigger: GACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCT...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581093.1
ENST00000582789.5
CDS TCA 90 bp TCTACTACCTCATCAGTGCTGAGGGGTATGAGGCTGCCATACGTTTaGAGGAATTCGTCCAAGATGCTCTGTACGCAGGTCACATGCTCC +
Preference number: 5 (lower is better)
Translates to: STTSSVLRGMRLPYV*RNSSKMLCTQVTCS
Trigger: GGAGCATGTGACCTGCGTACAGAGCATCTTGGACGAATTCCTTCAAACGTATGGCAGCCTCATACCCCTCAGCACTGATGAGGTAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580997.1
ENST00000583277.1
CDS CCA 90 bp CGTCGCCTCACATCAACAGAGATGAGGGACCAATGCACCTCCAGGTaGATGGGGATTAGCAGTAGCTCCTTATTGAAGATGTCCACCTTT +
Preference number: 5 (lower is better)
Translates to: RRLTSTEMRDQCTSR*MGISSSSLLKMSTF
Trigger: AAAGGTGGACATCTTCAATAAGGAGCTACTGCTAATCCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTCTGTTGATGTGAGGCGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580231.5
CDS-3UTR CAA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGAGGCTGCCATACGTTaGAAGGAATTCGTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWEAAIR*KEFVQD
Trigger: ATCTTGGACGAATTCCTTCAAACGTATGGCAGCCTC...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CAA 90 bp GATGGTGCGTCGCCTCACATCAACAGAGATGAGGGACCAATGCACCTCCAGGTGAGCAGTAGCTCCTTATaGAAGATGTCCACGTTTTTG +
Preference number: 5 (lower is better)
Translates to: DGASPHINRDEGPMHLQVSSSSL*KMSTFL
Trigger: CAAAAACGTGGACATCTTCAATAAGGAGCTACTGCT...CACCTGGAGGTGCATTGGTCCCTCATCTCTGTTGATGTGAGGCGACGCACCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS-3UTR CAA 90 bp GAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGGGTTCTGCCTGTAGATACTaGGCAATATGCTTAGGGCAG +
Preference number: 5 (lower is better)
Translates to: EFLGKGLPCLPSHLWAWGSACRY*AICLGQ
Trigger: CTGCCCTAAGCATATTGCCAAGTATCTACAGGCAGA...ACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000582789.5
CDS-3UTR CAA 90 bp ACATCAACAGAGATGAGGGACCAATGCACCTCCAGGTGGATGGGGATTAGCAGTGACAGGGCCAGATGCTaGCAGTACTGCAACACAAAA +
Preference number: 5 (lower is better)
Translates to: TSTEMRDQCTSRWMGISSDRARC*QYCNTK
Trigger: TTTTGTGTTGCAGTACTGCAAGCATCTGGCCCTGTC...ACTGCTAATCCCCATCCACCTGGAGGTGCATTGGTCCCTCATCTCTGTTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619785.1
CDS CCA 90 bp CTGCTTAAAACTGCAGAAGTTCCTCTGGGTACTGACCTATCTGGTTaGGCCTACCTTTTCAGGGACTGTGTCCATGACCAGGTCTCCATA +
Preference number: 5 (lower is better)
Translates to: LLKTAEVPLGTDLSG*AYLFRDCVHDQVSI
Trigger: TATGGAGACCTGGTCATGGACACAGTCCCTGAAAAGGTAGGCCCAACCAGATAGGTCAGTACCCAGAGGAACTTCTGCAGTTTTAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580997.1
ENST00000583277.1
CDS-3UTR CAA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTGAGGCTGCCATACGTTaGAAGGAATTCGTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWAEAAIR*KEFVQD
Trigger: ATCTTGGACGAATTCCTTCAAACGTATGGCAGCCTC...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS-3UTR CAA 90 bp GAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTCTGCCTGTAGATACTaGGCAATATGCTTAGGGCAG +
Preference number: 5 (lower is better)
Translates to: ELEFLGKGLPCLPSHLWASACRY*AICLGQ
Trigger: CTGCCCTAAGCATATTGCCAAGTATCTACAGGCAGA...AGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000582789.5
CDS-3UTR CAA 90 bp AAGGAACTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGACAGGGCCAGATGCTaGCAGTACTGCAACACAAAA +
Preference number: 5 (lower is better)
Translates to: KELEFLGKGLPCLPSHLWDRARC*QYCNTK
Trigger: TTTTGTGTTGCAGTACTGCAAGCATCTGGCCCTGTC...CCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
CDS GCA 90 bp AGACTGGCCTGGGGAAAGCACAATGGGATGCACACAGTTGACTCATaGATGCAAATAAGACCGCAAGAAGGATACACTGAAGCAGAATCC +
Preference number: 5 (lower is better)
Translates to: RLAWGKHNGMHTVDS*MQIRPQEGYTEAES
Trigger: GGATTCTGCTTCAGTGTATCCTTCTTGCGGTCTTATTTGCATGCATGAGTCAACTGTGTGCATCCCATTGTGCTTTCCCCAGGCCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583277.1
CDS-3UTR CAA 90 bp CTGGAGTTTCTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATGGGCTTGGAGCAGTAGCTCCTTATaGAAGATGTCCACCTTTTCA +
Preference number: 5 (lower is better)
Translates to: LEFLGKGLPCLPSHLWAWSSSSL*KMSTFS
Trigger: TGAAAAGGTGGACATCTTCAATAAGGAGCTACTGCT...CCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAGAAACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580231.5
CDS-3UTR CAA 90 bp ATATATATATATAAAAGTTTGAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCGCTCCCGCCTGGGACTaGAGTAAGCTGGGGGTATGC +
Preference number: 5 (lower is better)
Translates to: IYIYKSLKIWQAVILLSAAPAWD*SKLGVC
Trigger: GCATACCCCCAGCTTACTCAAGTCCCAGGCGGGAGC...GGCGGACAATAGGATCACTGCCTGCCAGATCTTCAAACTTTTATATATATATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp ATATATATATATAAAAGTTTGAAGATCTGGCAGGCAGTGATCCTATTGTCCGCCGGTGAAAGATGGTTCTaGGGGTGTGCGAGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: IYIYKSLKIWQAVILLSAGERWF*GCARPR
Trigger: GCGGGGCCTCGCACACCCCAAGAACCATCTTTCACC...GGCGGACAATAGGATCACTGCCTGCCAGATCTTCAAACTTTTATATATATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTCAGGCAGTGATCCTATaGTCCGCCCACCACCCCCAG +
Preference number: 5 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFQAVIL*SAHHPQ
Trigger: CTGGGGGTGGTGGGCGGACAATAGGATCACTGCCTG...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp CTTTTCTGTAGCCACCCCCTGCACATCAGAAATCAACAAGTATTCTCTCAAAGAAGGAACTGGAGTTTCTaGGGAAGGGACTCCCATGTC +
Preference number: 5 (lower is better)
Translates to: LFCSHPLHIRNQQVFSQRRNWSF*GRDSHV
Trigger: GACATGGGAGTCCCTTCCCAAGAAACTCCAGTTCCT...TCTTTGAGAGAATACTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000581093.1
CDS-3UTR CAA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTAACCCTCCACCTGACTaGAGTCGGGGTTTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFNPPPD*SRGLGG
Trigger: ACCTCCCAAACCCCGACTCAAGTCAGGTGGAGGGTT...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp CTTTTCTGTAGCCACCCCCTGCACATCAGAAATCAACAAGTATTCTCTCAAAGAAGCAGTAGCTCCTTATaGAAGATGTCCACGTTTTTG +
Preference number: 5 (lower is better)
Translates to: LFCSHPLHIRNQQVFSQRSSSSL*KMSTFL
Trigger: CAAAAACGTGGACATCTTCAATAAGGAGCTACTGCT...TCTTTGAGAGAATACTTGTTGATTTCTGATGTGCAGGGGGTGGCTACAGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS-3UTR CAA 90 bp TCAACAAAGGATCCTTTATTGACCAGAGCAGGACCGTGGCATTTATATATTTTTAGCAGTAGCTCCTTATaGAAGATGTCCACGTTTTTG +
Preference number: 5 (lower is better)
Translates to: STKDPLLTRAGPWHLYIFSSSSL*KMSTFL
Trigger: CAAAAACGTGGACATCTTCAATAAGGAGCTACTGCT...AAAAATATATAAATGCCACGGTCCTGCTCTGGTCAATAAAGGATCCTTTGTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS GCA 72 bp CGTCTCAATTCAGGATTCCAACGCTTCTGGGCCGCGTaGCGCGCCGCCGAGCACCCCGCCGCGCCGCCTCTG +
Preference number: 6 (lower is better)
Translates to: RLNSGFQRFWAA*RAAEHPAAPPL
Trigger: CAGAGGCGGCGCGGCGGGGTGCTCGGCGGCGCGGCACGCGGCCCAGAAGCGTTGGAATCCTGAATTGAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321337.12
CDS CCA 72 bp CTCGGCGGCGGCGCTGTGAGCAGGTTTTTCGATGAGTaGGGCGGGAAGGGCGGGGCCGCTGGGAGGTTCCCA +
Preference number: 6 (lower is better)
Translates to: LGGGAVSRFFDE*GGKGGAAGRFP
Trigger: TGGGAACCTCCCAGCGGCCCCGCCCTTCCCGCCCCACTCATCGAAAAACCTGCTCACAGCGCCGCCGCCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS TCA 72 bp AGGTGGGGGCCAACGAAGACGCTCCCGCCTGGGACTTaGGTAAGCTGGGGGTATGCCGGGTCCAGGAGGCTC +
Preference number: 6 (lower is better)
Translates to: RWGPTKTLPPGT*VSWGYAGSRRL
Trigger: GAGCCTCCTGGACCCGGCATACCCCCAGCTTACTCAAGTCCCAGGCGGGAGCGTCTTCGTTGGCCCCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS TCA 72 bp CATCCGGAAGGCTCTCATGGCTCGGCGGCGGCGCTGTaGGCAGGTTTTTCGATGAGTGGGGCGGGAAGGGCG +
Preference number: 6 (lower is better)
Translates to: HPEGSHGSAAAL*AGFSMSGAGRA
Trigger: CGCCCTTCCCGCCCCACTCATCGAAAAACCTGCTCACAGCGCCGCCGCCGAGCCATGAGAGCCTTCCGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS CAA 72 bp GAGGTGGGGGCCAACGAAGACGCTCCCGCCTGGGACTaGAGTAAGCTGGGGGTATGCCGGGTCCAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: EVGANEDAPAWD*SKLGVCRVQEA
Trigger: AGCCTCCTGGACCCGGCATACCCCCAGCTTACTCAAGTCCCAGGCGGGAGCGTCTTCGTTGGCCCCCACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS CAA 72 bp TCTGGCCCAAACCCTCCACCTGACTTGAGTCGGGGTTaGGGAGGTGGGGGCCAACGAAGACGCTCCCGCCTG +
Preference number: 6 (lower is better)
Translates to: SGPNPPPDLSRG*GGGGQRRRSRL
Trigger: CAGGCGGGAGCGTCTTCGTTGGCCCCCACCTCCCAAACCCCGACTCAAGTCAGGTGGAGGGTTTGGGCCAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS CAA 90 bp GACCCAGGATCTGGCCCAAACCCTCCACCTGACTTGAGTCGGGGTTaGGGAGGTGGGGGCCAACGAAGACGCTCCCGCCTGGGACTTGAG +
Preference number: 6 (lower is better)
Translates to: DPGSGPNPPPDLSRG*GGGGQRRRSRLGLE
Trigger: CTCAAGTCCCAGGCGGGAGCGTCTTCGTTGGCCCCCACCTCCCAAACCCCGACTCAAGTCAGGTGGAGGGTTTGGGCCAGATCCTGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS CAA 90 bp GGTGGCGCCCCCAAAGCTTCCAGTGGAATGTCAGCGAGGTGCTTTTaGAGTAGAGCAGCATCCGGAAGGCTCTCATGGCTCGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: GGAPKASSGMSARCF*SRAASGRLSWLGGG
Trigger: GCCGCCGCCGAGCCATGAGAGCCTTCCGGATGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCCACTGGAAGCTTTGGGGGCGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS TCA 72 bp CTGACCCAGGATCTGGCCCAAACCCTCCACCTGACTTaGGTCGGGGTTTGGGAGGTGGGGGCCAACGAAGAC +
Preference number: 6 (lower is better)
Translates to: LTQDLAQTLHLT*VGVWEVGANED
Trigger: GTCTTCGTTGGCCCCCACCTCCCAAACCCCGACTCAAGTCAGGTGGAGGGTTTGGGCCAGATCCTGGGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS GCA 72 bp CATGTTCATCACCTGGGGAGAAGATGGGAGGCAGCTTaGCATGGAGGGTGCGGCATGGGTACAGGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: HVHHLGRRWEAA*HGGCGMGTGLP
Trigger: GGGGAGCCCTGTACCCATGCCGCACCCTCCATGGCAAGCTGCCTCCCATCTTCTCCCCAGGTGATGAACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583277.1
CDS GCA 72 bp GCACACATTGCTGATGAGGATGCTGGCATCAGGGGGTaGCAAGCTGCGCTCCCCTTCTGGCCCAGATTGTCC +
Preference number: 6 (lower is better)
Translates to: AHIADEDAGIRG*QAALPFWPRLS
Trigger: GGACAATCTGGGCCAGAAGGGGAGCGCAGCTTGGCACCCCCTGATGCCAGCATCCTCATCAGCAATGTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000583277.1
CDS TCA 72 bp CTCCTCCTCCTCCTCTTCTTCCTCCTCTTCACTTGCTaGGGCATCAAAAGAGGGTCGGGGGACAGGGAGGCG +
Preference number: 6 (lower is better)
Translates to: LLLLLFFLLFTC*GIKRGSGDREA
Trigger: CGCCTCCCTGTCCCCCGACCCTCTTTTGATGCCTCAGCAAGTGAAGAGGAGGAAGAAGAGGAGGAGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS GCA 72 bp AGGAATTCGTCCAAGATGCTCTGTACGCAGGTCACATaGTCCTCTCGCAGGGGGCTGTGCTGGCCGGCTTTC +
Preference number: 6 (lower is better)
Translates to: RNSSKMLCTQVT*SSRRGLCWPAF
Trigger: GAAAGCCGGCCAGCACAGCCCCCTGCGAGAGGAGCATGTGACCTGCGTACAGAGCATCTTGGACGAATTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580997.1
ENST00000583277.1
CDS CCA 72 bp CGTGCCGCTTATAAGCCACTCGGAAGCCCCTCACCATaGCATTGCCTGGCATCCGCTGGTAAGACTGGATCA +
Preference number: 6 (lower is better)
Translates to: RAAYKPLGSPSP*HCLASAGKTGS
Trigger: TGATCCAGTCTTACCAGCGGATGCCAGGCAATGCCATGGTGAGGGGCTTCCGAGTGGCTTATAAGCGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000580997.1
ENST00000583277.1
CDS CCA 72 bp CTTGGGAAGGGACTCCCATGTCTCCCTTCCCATTTATaGGCTTGGGGTCTGGGGTACGAGGCTCACACAGTG +
Preference number: 6 (lower is better)
Translates to: LGKGLPCLPSHL*AWGLGYEAHTV
Trigger: CACTGTGTGAGCCTCGTACCCCAGACCCCAAGCCCATAAATGGGAAGGGAGACATGGGAGTCCCTTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000581010.1
ENST00000581093.1
ENST00000582789.5
CDS CCA 72 bp CAGGTCTCCATACATGTTCATCACCTGGGGAGAAGATaGGAGGCAGCTTGCCATGGAGGGTGCGGCATGGGT +
Preference number: 6 (lower is better)
Translates to: QVSIHVHHLGRR*EAACHGGCGMG
Trigger: ACCCATGCCGCACCCTCCATGGCAAGCTGCCTCCCATCTTCTCCCCAGGTGATGAACATGTATGGAGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583277.1
CDS GCA 72 bp GGCGCCCCCAAAGCTTCCAGTGGAATGTCAGCGAGGTaGTTTTTGAGTAGAGCAGCATCCGGAAGGCTCTCA +
Preference number: 6 (lower is better)
Translates to: GAPKASSGMSAR*FLSRAASGRLS
Trigger: TGAGAGCCTTCCGGATGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCCACTGGAAGCTTTGGGGGCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS GCA 72 bp GCTTATAAGCCACTCGGAAGCCCCTCACCATGGCATTaGCTGGCATCCGCTGGTAAGACTGGATCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: AYKPLGSPSPWH*LASAGKTGSAA
Trigger: TGCAGCTGATCCAGTCTTACCAGCGGATGCCAGGCAATGCCATGGTGAGGGGCTTCCGAGTGGCTTATAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000580997.1
ENST00000583277.1
CDS CCA 72 bp TGCTTTTTGAGTAGAGCAGCATCCGGAAGGCTCTCATaGCTCGGCGGCGGCGCTGTGAGCAGGTTTTTCGAT +
Preference number: 6 (lower is better)
Translates to: CFLSRAASGRLS*LGGGAVSRFFD
Trigger: ATCGAAAAACCTGCTCACAGCGCCGCCGCCGAGCCATGAGAGCCTTCCGGATGCTGCTCTACTCAAAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS CAA 72 bp CATCCTCCTCCTCCTCCTCTTCTTCCTCCTCTTCACTaGCTGAGGCATCAAAAGAGGGTCGGGGGACAGGGA +
Preference number: 6 (lower is better)
Translates to: HPPPPPLLPPLH*LRHQKRVGGQG
Trigger: TCCCTGTCCCCCGACCCTCTTTTGATGCCTCAGCAAGTGAAGAGGAGGAAGAAGAGGAGGAGGAGGAGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS CCA 72 bp GCCAGTTCTGTCCATACAAGGTCCCCAAGTCATCCATaGTCAGCACGTGCCGCTTATAAGCCACTCGGAAGC +
Preference number: 6 (lower is better)
Translates to: ASSVHTRSPSHP*SARAAYKPLGS
Trigger: GCTTCCGAGTGGCTTATAAGCGGCACGTGCTGACCATGGATGACTTGGGGACCTTGTATGGACAGAACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000580997.1
ENST00000583277.1
ENST00000619785.1
CDS CCA 72 bp GGGCAGGGGAAATGGAATGGGCATGAGAGACTGGCCTaGGGAAAGCACAATGGGATGCACACAGTTGACTCA +
Preference number: 6 (lower is better)
Translates to: GQGKWNGHERLA*GKHNGMHTVDS
Trigger: TGAGTCAACTGTGTGCATCCCATTGTGCTTTCCCCAGGCCAGTCTCTCATGCCCATTCCATTTCCCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583277.1
CDS CAA 72 bp TCCCAGGTAAAGACTCTCCCATCAGCTTCCAAGGATTaGGCACCTGCCTGCAGAGTCCTCCCCTTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SQVKTLPSASKD*APACRVLPFSS
Trigger: AGAGCTGAAGGGGAGGACTCTGCAGGCAGGTGCCAAATCCTTGGAAGCTGATGGGAGAGTCTTTACCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583277.1
CDS TCA 72 bp CCAAAGCTTCCAGTGGAATGTCAGCGAGGTGCTTTTTaGGTAGAGCAGCATCCGGAAGGCTCTCATGGCTCG +
Preference number: 6 (lower is better)
Translates to: PKLPVECQRGAF*VEQHPEGSHGS
Trigger: CGAGCCATGAGAGCCTTCCGGATGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCCACTGGAAGCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS CAA 72 bp CCCAAAGCTTCCAGTGGAATGTCAGCGAGGTGCTTTTaGAGTAGAGCAGCATCCGGAAGGCTCTCATGGCTC +
Preference number: 6 (lower is better)
Translates to: PKASSGMSARCF*SRAASGRLSWL
Trigger: GAGCCATGAGAGCCTTCCGGATGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCCACTGGAAGCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321337.12
ENST00000429205.6
CDS CAA 90 bp CTCTACTACCTCATCAGTGCTGAGGGGTATGAGGCTGCCATACGTTaGAAGGAATTCGTCCAAGATGCTCTGTACGCAGGTCACATGCTC +
Preference number: 6 (lower is better)
Translates to: LYYLISAEGYEAAIR*KEFVQDALYAGHML
Trigger: GAGCATGTGACCTGCGTACAGAGCATCTTGGACGAATTCCTTCAAACGTATGGCAGCCTCATACCCCTCAGCACTGATGAGGTAGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000580997.1
ENST00000583277.1
CDS TCA 72 bp TCATCAGTGCTGAGGGGTATGAGGCTGCCATACGTTTaGAGGAATTCGTCCAAGATGCTCTGTACGCAGGTC +
Preference number: 6 (lower is better)
Translates to: SSVLRGMRLPYV*RNSSKMLCTQV
Trigger: GACCTGCGTACAGAGCATCTTGGACGAATTCCTTCAAACGTATGGCAGCCTCATACCCCTCAGCACTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000580997.1
ENST00000583277.1
CDS CAA 72 bp CTCATCAGTGCTGAGGGGTATGAGGCTGCCATACGTTaGAAGGAATTCGTCCAAGATGCTCTGTACGCAGGT +
Preference number: 6 (lower is better)
Translates to: LISAEGYEAAIR*KEFVQDALYAG
Trigger: ACCTGCGTACAGAGCATCTTGGACGAATTCCTTCAAACGTATGGCAGCCTCATACCCCTCAGCACTGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321337.12
ENST00000429205.6
ENST00000580231.5
ENST00000580997.1
ENST00000583277.1
CDS CAA 72 bp ACCTCCAGGTGGATGGGGATTAGCAGTAGCTCCTTATaGAAGATGTCCACCTTTTCAGGGACTGTGTCCATG +
Preference number: 6 (lower is better)
Translates to: TSRWMGISSSSL*KMSTFSGTVSM
Trigger: CATGGACACAGTCCCTGAAAAGGTGGACATCTTCAATAAGGAGCTACTGCTAATCCCCATCCACCTGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580231.5
CDS TCA 72 bp ACTGGCCTGGGGAAAGCACAATGGGATGCACACAGTTaGCTCATGCATGCAAATAAGACCGCAAGAAGGATA +
Preference number: 6 (lower is better)
Translates to: TGLGKAQWDAHS*LMHANKTARRI
Trigger: TATCCTTCTTGCGGTCTTATTTGCATGCATGAGTCAACTGTGTGCATCCCATTGTGCTTTCCCCAGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583277.1
CDS GCA 72 bp TGGGGAAAGCACAATGGGATGCACACAGTTGACTCATaGATGCAAATAAGACCGCAAGAAGGATACACTGAA +
Preference number: 6 (lower is better)
Translates to: WGKHNGMHTVDS*MQIRPQEGYTE
Trigger: TTCAGTGTATCCTTCTTGCGGTCTTATTTGCATGCATGAGTCAACTGTGTGCATCCCATTGTGCTTTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583277.1