RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SENP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000163904

Ensembl transcript IDs: ENST00000296257.10, ENST00000413407.5, ENST00000430355.5, ENST00000439684.5, ENST00000453532.5, ENST00000458551.1, ENST00000476011.1, ENST00000483005.1

Found 397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAACCTGCTCCCGCTTCAGTCATCACCCACCACATGGCCTCTGGCTaGCCATCCAGTAGGCCCAGCATTTTCCATCCACACCACAGGCCC +
Preference number: 1 (lower is better)
Translates to: QPAPASVITHHMASG*PSSRPSIFHPHHRP
Trigger: GGGCCTGTGGTGTGGATGGAAAATGCTGGGCCTACTGGATGGTCAGCCAGAGGCCATGTGGTGGGTGATGACTGAAGCGGGAGCAGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR CCA 90 bp GAGGTGTGGTACAACCTGCTCCCGCTTCAGTCATCACCCACCACATaGCCTCTGGCTGACCATCCAGTAGGCCCAGCATTTTCCATCCAC +
Preference number: 1 (lower is better)
Translates to: EVWYNLLPLQSSPTT*PLADHPVGPAFSIH
Trigger: GTGGATGGAAAATGCTGGGCCTACTGGATGGTCAGCCAGAGGCCATGTGGTGGGTGATGACTGAAGCGGGAGCAGGTTGTACCACACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR CCA 90 bp GGTTCACTGTTTCTACTAGGATACATTCCGCCCACACCCACACCTTaGTCCCCACATCAAGCAGCTCCTCACAGCAGGAAGACATCCGCT +
Preference number: 1 (lower is better)
Translates to: GSLFLLGYIPPTPTP*SPHQAAPHSRKTSA
Trigger: AGCGGATGTCTTCCTGCTGTGAGGAGCTGCTTGATGTGGGGACCAAGGTGTGGGTGTGGGCGGAATGTATCCTAGTAGAAACAGTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR GCA 90 bp GATAATCAGAGTCCCTTGGGCACAGTTCCACTGTTCACGGCACTGTaGCAACGCTGTAGTGTCAGACTTCCTCTGAAAGGCAACAGGAGC +
Preference number: 1 (lower is better)
Translates to: DNQSPLGTVPLFTAL*QRCSVRLPLKGNRS
Trigger: GCTCCTGTTGCCTTTCAGAGGAAGTCTGACACTACAGCGTTGGCACAGTGCCGTGAACAGTGGAACTGTGCCCAAGGGACTCTGATTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR GCA 90 bp CCCCATGTCCTAAACCAGGAGTTTTACAAGTCTCAGGGAACTGGCTaGAATAGCTGTAACCAGTATACCTCTGGGACCAGCAGCCGGAGC +
Preference number: 1 (lower is better)
Translates to: PHVLNQEFYKSQGTG*NSCNQYTSGTSSRS
Trigger: GCTCCGGCTGCTGGTCCCAGAGGTATACTGGTTACAGCTATTGCAGCCAGTTCCCTGAGACTTGTAAAACTCCTGGTTTAGGACATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR TCA 90 bp CACTGTTCACGGCACTGTGCCAACGCTGTAGTGTCAGACTTCCTCTaGAAGGCAACAGGAGCCCTATCCCACAGCATTTTCATTTCTCCC +
Preference number: 1 (lower is better)
Translates to: HCSRHCANAVVSDFL*KATGALSHSIFISP
Trigger: GGGAGAAATGAAAATGCTGTGGGATAGGGCTCCTGTTGCCTTTCAGAGGAAGTCTGACACTACAGCGTTGGCACAGTGCCGTGAACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR GCA 90 bp CCTCTGCACCCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATaGACTTTTGACAGCTCAGTACCTGTGAGAACAGAAGTGATGCAG +
Preference number: 1 (lower is better)
Translates to: PLHPKSGLEYSERPS*TFDSSVPVRTEVMQ
Trigger: CTGCATCACTTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGGGTGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR GCA 90 bp TTTGAACACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTaGCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGAG +
Preference number: 1 (lower is better)
Translates to: FEHPPPQYNGDASDP*HSLQKSSLLQPVPE
Trigger: CTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTGTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
3UTR CCA 90 bp CTTATGCCAAGGGAGACATGTGAGTGCCTAGAGAAGTATGGCCTGTaGTCTCCCACATTCAATTCAGGAACTCAGGGTCAAGCAGAAGGC +
Preference number: 1 (lower is better)
Translates to: LMPRETCECLEKYGL*SPTFNSGTQGQAEG
Trigger: GCCTTCTGCTTGACCCTGAGTTCCTGAATTGAATGTGGGAGACCACAGGCCATACTTCTCTAGGCACTCACATGTCTCCCTTGGCATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR CCA 90 bp CTGAAGGGGCCACATTCCGTGTTCCATTACAAGCAGAAGTTACCATaGGCTTTGTGGTCAGCTGGAATGGGAATCCAAATAAGCTGGCAG +
Preference number: 1 (lower is better)
Translates to: LKGPHSVFHYKQKLP*ALWSAGMGIQISWQ
Trigger: CTGCCAGCTTATTTGGATTCCCATTCCAGCTGACCACAAAGCCCATGGTAACTTCTGCTTGTAATGGAACACGGAATGTGGCCCCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458551.1
3UTR TCA 90 bp TTAACCATGGTACCAAACTCTCAAGTGAAGCACACTGATGCCTGGTaGAAGCCAGGCGTTTGGTATGATGCTGACCTAGTGAACCTCTGG +
Preference number: 1 (lower is better)
Translates to: LTMVPNSQVKHTDAW*KPGVWYDADLVNLW
Trigger: CCAGAGGTTCACTAGGTCAGCATCATACCAAACGCCTGGCTTTCACCAGGCATCAGTGTGCTTCACTTGAGAGTTTGGTACCATGGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR GCA 90 bp AGAAGGGGAAGTCTCTTTAAGGTGACCACAACACTCTTCGGAAGATaGTTGGATAATCAGAGTCCCTTGGGCACAGTTCCACTGTTCACG +
Preference number: 1 (lower is better)
Translates to: RRGSLFKVTTTLFGR*LDNQSPLGTVPLFT
Trigger: CGTGAACAGTGGAACTGTGCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCACCTTAAAGAGACTTCCCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR GCA 90 bp CCTGTTCCTGAGGTTTCCACATTAAAGAACTCTCTGGATTACCTTTaGTATGGCGACGGCCACCTGGTCTTCTATTACAGCCTTCTGAGT +
Preference number: 1 (lower is better)
Translates to: PVPEVSTLKNSLDYL*YGDGHLVFYYSLLS
Trigger: ACTCAGAAGGCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAAACCTCAGGAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR CCA 90 bp CCACATTCCGTGTTCCATTACAAGCAGAAGTTACCATGGGCTTTGTaGTCAGCTGGAATGGGAATCCAAATAAGCTGGCAGCATTGTAGA +
Preference number: 1 (lower is better)
Translates to: PHSVFHYKQKLPWAL*SAGMGIQISWQHCR
Trigger: TCTACAATGCTGCCAGCTTATTTGGATTCCCATTCCAGCTGACCACAAAGCCCATGGTAACTTCTGCTTGTAATGGAACACGGAATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458551.1
3UTR GCA 90 bp GTCTCCCACATTCAATTCAGGAACTCAGGGTCAAGCAGAAGGCCATaGTATAGACTTCAACACTCTGCTCTTCCCAATTTCATTATGTCC +
Preference number: 1 (lower is better)
Translates to: VSHIQFRNSGSSRRP*YRLQHSALPNFIMS
Trigger: GGACATAATGAAATTGGGAAGAGCAGAGTGTTGAAGTCTATAGCATGGCCTTCTGCTTGACCCTGAGTTCCTGAATTGAATGTGGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR TCA 90 bp CCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTaGGGTTTCCACATTAAAGAACTCTCTGGATTACCTTTGCTATGG +
Preference number: 1 (lower is better)
Translates to: PLPLSSEIISVTACS*GFHIKELSGLPLLW
Trigger: CCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR CCA 90 bp ACATCAAGCAGCTCCTCACAGCAGGAAGACATCCGCTATCAGACATaGTTTTCTGAAGTTGTGCTTAGGATTTCAGAGGAGGAAAAATTC +
Preference number: 1 (lower is better)
Translates to: TSSSSSQQEDIRYQT*FSEVVLRISEEEKF
Trigger: GAATTTTTCCTCCTCTGAAATCCTAAGCACAACTTCAGAAAACCATGTCTGATAGCGGATGTCTTCCTGCTGTGAGGAGCTGCTTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR CCA 90 bp CAGGACTCTGCGTGGCTGATCTCGGGTAACTGTCACTCTGATCTTTaGATAGTCACTTATTCCATTAGGAGATTTATTACCCAGTTTCAG +
Preference number: 1 (lower is better)
Translates to: QDSAWLISGNCHSDL*IVTYSIRRFITQFQ
Trigger: CTGAAACTGGGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTTACCCGAGATCAGCCACGCAGAGTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439684.5
3UTR GCA 90 bp ACTATATTACTAACATGTTTCCTTATGCCAAGGGAGACATGTGAGTaGCTAGAGAAGTATGGCCTGTGGTCTCCCACATTCAATTCAGGA +
Preference number: 1 (lower is better)
Translates to: TILLTCFLMPRETCE*LEKYGLWSPTFNSG
Trigger: TCCTGAATTGAATGTGGGAGACCACAGGCCATACTTCTCTAGGCACTCACATGTCTCCCTTGGCATAAGGAAACATGTTAGTAATATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR TCA 90 bp GCAGCAGTAAATGACCACTGCCCATTATGTTTGCAAACGAGTGAGTaGATGAATACGCTGAACAAACACACAGAAACAAACAATTCACAG +
Preference number: 1 (lower is better)
Translates to: AAVNDHCPLCLQTSE*MNTLNKHTETNNSQ
Trigger: CTGTGAATTGTTTGTTTCTGTGTGTTTGTTCAGCGTATTCATTCACTCACTCGTTTGCAAACATAATGGGCAGTGGTCATTTACTGCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR TCA 90 bp AAAAACTATATTACTAACATGTTTCCTTATGCCAAGGGAGACATGTaGGTGCCTAGAGAAGTATGGCCTGTGGTCTCCCACATTCAATTC +
Preference number: 1 (lower is better)
Translates to: KNYITNMFPYAKGDM*VPREVWPVVSHIQF
Trigger: GAATTGAATGTGGGAGACCACAGGCCATACTTCTCTAGGCACTCACATGTCTCCCTTGGCATAAGGAAACATGTTAGTAATATAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR CCA 90 bp CTCAGGCCAGCCCCTACAATTCTGAGGTTTATACTCAACCAGATCTaGGATGAAAATGAAGATTTAGGGTTTACAGTTACTTCAAATCCA +
Preference number: 1 (lower is better)
Translates to: LRPAPTILRFILNQI*DENEDLGFTVTSNP
Trigger: TGGATTTGAAGTAACTGTAAACCCTAAATCTTCATTTTCATCCCAGATCTGGTTGAGTATAAACCTCAGAATTGTAGGGGCTGGCCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR GCA 90 bp CTGGTGCTGAGTAAATGTGATAGGTTTGTCCCTAGAAATATAATCTaGATATTTACAAGTAAACATTCCACAATCACTCCCATTCAGCTG +
Preference number: 1 (lower is better)
Translates to: LVLSKCDRFVPRNII*IFTSKHSTITPIQL
Trigger: CAGCTGAATGGGAGTGATTGTGGAATGTTTACTTGTAAATATGCAGATTATATTTCTAGGGACAAACCTATCACATTTACTCAGCACCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR-3UTR CCA 90 bp CCACTGCCCAGGCGGAGTCGGGCCGACACTTCTTCTGATAGGTCAGGCTCCAGTAGGCAGGACTCTGCGTaGCTGATCTCGGGTAACTGT +
Preference number: 2 (lower is better)
Translates to: PLPRRSRADTSSDRSGSSRQDSA*LISGNC
Trigger: ACAGTTACCCGAGATCAGCCACGCAGAGTCCTGCCT...ACTGGAGCCTGACCTATCAGAAGAAGTGTCGGCCCGACTCCGCCTGGGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR-3UTR GCA 90 bp CCACTGCCCAGGCGGAGTCGGGCCGACACTTCTTCTGATAGGTCAGGCTCCAGTTCTCTGGATTACCTTTaGTATGGCGACGGCCACCTG +
Preference number: 2 (lower is better)
Translates to: PLPRRSRADTSSDRSGSSSLDYL*YGDGHL
Trigger: CAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGA...ACTGGAGCCTGACCTATCAGAAGAAGTGTCGGCCCGACTCCGCCTGGGCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR-3UTR GCA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCCAGCAGCCGGAGCACTaGAAATGGCAGGCGTGTAGA +
Preference number: 2 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPQQPEH*KWQACR
Trigger: TCTACACGCCTGCCATTTGCAGTGCTCCGGCTGCTG...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR TCA 90 bp CCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGCTTGAGTAGGACTAGAGTACAGTaGGAGGCCTTCATGCACTTT +
Preference number: 2 (lower is better)
Translates to: PPPVRVPSCSSAGSGSLSRTRVQ*EAFMHF
Trigger: AAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCT...ACTCAAGCTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR-3UTR CCA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCGCTGTGCTCATTACCTaGTCCCAGCACTCACTGGCA +
Preference number: 2 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPAVLIT*SQHSLA
Trigger: TGCCAGTGAGTGCTGGGACCAGGTAATGAGCACAGC...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR TCA 90 bp GAGAGGTGTGGTACAACCTGCTCCCGCTTCAGTCATCACCCACCACATGGCCTCAACAGTCCAAAGCTCTaGGCAGGCACAGCCTTACAA +
Preference number: 2 (lower is better)
Translates to: ERCGTTCSRFSHHPPHGLNSPKL*AGTALQ
Trigger: TTGTAAGGCTGTGCCTGCTCAGAGCTTTGGACTGTT...GAGGCCATGTGGTGGGTGATGACTGAAGCGGGAGCAGGTTGTACCACACCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR GCA 90 bp CAGCTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGAGAGGCCTTCATaGACTTTTGACAGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: QLHFLPPPVRVPSCSSAGSERPS*TFDSSV
Trigger: TACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACT...CCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR-3UTR GCA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCCTGTTCACGGCACTGTaGCAACGCTGTAGTGTCAGA +
Preference number: 2 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPLFTAL*QRCSVR
Trigger: TCTGACACTACAGCGTTGGCACAGTGCCGTGAACAG...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CCA 90 bp CTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGGCGTTTGTTCTTGTGTaGGTTGAACAGTCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: LPSAPSESSLLLFSREWQAFVLV*VEQSKA
Trigger: AGCTTTGGACTGTTCAACCCACACAAGAACAAACGC...CTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR CAA 90 bp AGGTTCACTGTTTCTACTAGGATACATTCCGCCCACACCCACACCTaGGTCCCCACATCAAGCAGCTCCTCACAGCAGGAAGACATCCGC +
Preference number: 2 (lower is better)
Translates to: RFTVSTRIHSAHTHT*VPTSSSSSQQEDIR
Trigger: GCGGATGTCTTCCTGCTGTGAGGAGCTGCTTGATGTGGGGACCAAGGTGTGGGTGTGGGCGGAATGTATCCTAGTAGAAACAGTGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR TCA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCAGGACTAGAGTACAGTaGGAGGCCTTCATGCACTTT +
Preference number: 2 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPRTRVQ*EAFMHF
Trigger: AAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCT...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR-3UTR TCA 90 bp CAGCTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGTTGCAAACGAGTGAGTaGATGAATACGCTGAACAAA +
Preference number: 2 (lower is better)
Translates to: QLHFLPPPVRVPSCSSAGLQTSE*MNTLNK
Trigger: TTTGTTCAGCGTATTCATTCACTCACTCGTTTGCAA...CCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR-3UTR TCA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCCAGGGAGTGGCAGCTTaGGTAACATTCCTTTCAGAA +
Preference number: 2 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPQGVAA*VTFLSE
Trigger: TTCTGAAAGGAATGTTACTCAAGCTGCCACTCCCTG...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR-3UTR TCA 90 bp GAGAGGTGTGGTACAACCTGCTCCCGCTTCAGTCATCACCCACCACATGGCCTCCAGCCCCTACAATTCTaGGGTTTATACTCAACCAGA +
Preference number: 2 (lower is better)
Translates to: ERCGTTCSRFSHHPPHGLQPLQF*GLYSTR
Trigger: TCTGGTTGAGTATAAACCTCAGAATTGTAGGGGCTG...GAGGCCATGTGGTGGGTGATGACTGAAGCGGGAGCAGGTTGTACCACACCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CCA 90 bp TGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCATGGCGACGGCCACCTaGTCTTCTATTACAGCCTTC +
Preference number: 2 (lower is better)
Translates to: WGRLRPLPLSSEIISVTAMATAT*SSITAF
Trigger: GAAGGCTGTAATAGAAGACCAGGTGGCCGTCGCCAT...GGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR CAA 90 bp GTGACCACAACACTCTTCGGAAGATGCTTGGATAATCAGAGTCCCTaGGGCACAGTTCCACTGTTCACGGCACTGTGCCAACGCTGTAGT +
Preference number: 2 (lower is better)
Translates to: VTTTLFGRCLDNQSP*GTVPLFTALCQRCS
Trigger: ACTACAGCGTTGGCACAGTGCCGTGAACAGTGGAACTGTGCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR TCA 90 bp CACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGATATGGAAATGTCTGTaGAAGAACCACCAGCAGCTA +
Preference number: 2 (lower is better)
Translates to: HPPPQYNGDASDPCHSLQIWKCL*KNHQQL
Trigger: TAGCTGCTGGTGGTTCTTTCACAGACATTTCCATAT...CTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR-3UTR TCA 90 bp ATCATTCACGTGGGCGGAATACAAACTGACATTCCTAACAGGACTTACCTAGCACACATGGCCTCTGGCTaGCCATCCAGTAGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: IIHVGGIQTDIPNRTYLAHMASG*PSSRPS
Trigger: GCTGGGCCTACTGGATGGTCAGCCAGAGGCCATGTG...TGCTAGGTAAGTCCTGTTAGGAATGTCAGTTTGTATTCCGCCCACGTGAATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR TCA 90 bp GCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTAGGACTCTGCGTGGCTaGTCTCGGGTAACTGTCACT +
Preference number: 2 (lower is better)
Translates to: ASDPCHSLQKSSLLQPVPRTLRG*SRVTVT
Trigger: AGTGACAGTTACCCGAGATCAGCCACGCAGAGTCCT...AGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR-3UTR GCA 90 bp GAGAGGTGTGGTACAACCTGCTCCCGCTTCAGTCATCACCCACCACATGGCCTCGCAGTAAATGACCACTaGCCATTATGTTTGCAAACG +
Preference number: 2 (lower is better)
Translates to: ERCGTTCSRFSHHPPHGLAVNDH*PLCLQT
Trigger: CGTTTGCAAACATAATGGGCAGTGGTCATTTACTGC...GAGGCCATGTGGTGGGTGATGACTGAAGCGGGAGCAGGTTGTACCACACCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR GCA 90 bp CTTTTCCATGTCCTCTGTAAGTTCAAGGAGATCGTCCGTTCTTCTGTCCCTCTCGTGAGAGTTCCCTCCTaGTCTTCAGCAGGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: LFHVLCKFKEIVRSSVPLVRVPS*SSAGSG
Trigger: GCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCAC...GAGAGGGACAGAAGAACGGACGATCTCCTTGAACTTACAGAGGACATGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR-3UTR GCA 90 bp CCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTTCTCTGGATTACCTTTaGTATGGCGACGGCCACCTG +
Preference number: 2 (lower is better)
Translates to: PQYNGDASDPCHSLQKSSSLDYL*YGDGHL
Trigger: CAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGA...AGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
3UTR-3UTR CCA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCATAATCAGAGTCCCTTaGGCACAGTTCCACTGTTCA +
Preference number: 2 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPIIRVP*AQFHCS
Trigger: TGAACAGTGGAACTGTGCCCAAGGGACTCTGATTAT...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CCA 90 bp TTCCTCTTTTTGAACACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGGATTACCTTTGCTATaGCGACGGCCACCTGGTCTT +
Preference number: 2 (lower is better)
Translates to: FLFLNTLLHSTMGTPQTLGLPLL*RRPPGL
Trigger: AAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCC...AAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTGTTCAAAAAGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
3UTR-3UTR TCA 90 bp TACCTCTGGGACCAGCAGCCGGAGCACTGCAAATGGCAGGCGTGTAGATTCATATCCATGAATCCAGTTTaGAGACTAAGCCAAGTCACC +
Preference number: 2 (lower is better)
Translates to: YLWDQQPEHCKWQACRFISMNPV*RLSQVT
Trigger: GGTGACTTGGCTTAGTCTTCAAACTGGATTCATGGA...TATGAATCTACACGCCTGCCATTTGCAGTGCTCCGGCTGCTGGTCCCAGAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR TCA 90 bp CCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGAGGTTTCCAGGACTCTGCGTGGCTaGTCTCGGGTAACTGTCACT +
Preference number: 2 (lower is better)
Translates to: PCHSLQKSSLLQPVPEVSRTLRG*SRVTVT
Trigger: AGTGACAGTTACCCGAGATCAGCCACGCAGAGTCCT...GGAAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR-3UTR GCA 90 bp TACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTACCTGTGAGAACAGAAGTGAGAGTTCCCTCCTaGTCTTCAGCAGGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: YSERPSCTFDSSVPVRTEVRVPS*SSAGSG
Trigger: GCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCAC...TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR-3UTR CCA 90 bp CACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTAGGCAGGACTCTGCGTaGCTGATCTCGGGTAACTGT +
Preference number: 2 (lower is better)
Translates to: HIKELSGLPLLWRRPPGLRQDSA*LISGNC
Trigger: ACAGTTACCCGAGATCAGCCACGCAGAGTCCTGCCT...AAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR-3UTR CCA 90 bp ACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACATGGCGACGGCCACCTaGTCTTCTATTACAGCCTTC +
Preference number: 2 (lower is better)
Translates to: TMGTPQTLATLFRNHLCYMATAT*SSITAF
Trigger: GAAGGCTGTAATAGAAGACCAGGTGGCCGTCGCCAT...GTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR-3UTR CCA 90 bp ACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGGATTACCTTTGCTATaGCGACGGCCACCTGGTCTT +
Preference number: 2 (lower is better)
Translates to: TVQWGRLRPLPLSSEIISGLPLL*RRPPGL
Trigger: AAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCC...AGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR CAA 90 bp AGGGGAAGTCTCTTTAAGGTGACCACAACACTCTTCGGAAGATGCTaGGATAATCAGAGTCCCTTGGGCACAGTTCCACTGTTCACGGCA +
Preference number: 2 (lower is better)
Translates to: RGSLFKVTTTLFGRC*DNQSPLGTVPLFTA
Trigger: TGCCGTGAACAGTGGAACTGTGCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCACCTTAAAGAGACTTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR GCA 90 bp GACTCGATCTTAACCATGGTACCAAACTCTCAAGTGAAGCACACTGATGCCTGGCCTTACAAACAGGATTaGAAGCAGCCCTCTGCACCC +
Preference number: 2 (lower is better)
Translates to: DSILTMVPNSQVKHTDAWPYKQD*KQPSAP
Trigger: GGGTGCAGAGGGCTGCTTGCAATCCTGTTTGTAAGG...CCAGGCATCAGTGTGCTTCACTTGAGAGTTTGGTACCATGGTTAAGATCGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR CAA 90 bp TTTTCCTTTGTCTCAATTATTGACACTTTCCTCCTGAGTAAGCCATaGCTTCCACTGCCCAGGCGGAGTCGGGCCGACACTTCTTCTGAT +
Preference number: 2 (lower is better)
Translates to: FSFVSIIDTFLLSKP*LPLPRRSRADTSSD
Trigger: ATCAGAAGAAGTGTCGGCCCGACTCCGCCTGGGCAGTGGAAGCAATGGCTTACTCAGGAGGAAAGTGTCAATAATTGAGACAAAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR CAA 90 bp GGGCCACATTCCGTGTTCCATTACAAGCAGAAGTTACCATGGGCTTaGTGGTCAGCTGGAATGGGAATCCAAATAAGCTGGCAGCATTGT +
Preference number: 2 (lower is better)
Translates to: GPHSVFHYKQKLPWA*WSAGMGIQISWQHC
Trigger: ACAATGCTGCCAGCTTATTTGGATTCCCATTCCAGCTGACCACAAAGCCCATGGTAACTTCTGCTTGTAATGGAACACGGAATGTGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458551.1
3UTR-3UTR TCA 90 bp TCTGAGCAGGCACAGCCTTACAAACAGGATTGCAAGCAGCCCTCTGCACCCCAATTAACCCACAATGCATaGGGTATATGGAAATGTCTG +
Preference number: 2 (lower is better)
Translates to: SEQAQPYKQDCKQPSAPQLTHNA*GIWKCL
Trigger: CAGACATTTCCATATACCTCATGCATTGTGGGTTAA...TTGGGGTGCAGAGGGCTGCTTGCAATCCTGTTTGTAAGGCTGTGCCTGCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR-3UTR TCA 90 bp ACAGCAACTGCTGATGAAGGATTTCCCACACCATCTTCTTCCGGAAGAGAGGCACAGGGAGTGGCAGCTTaGGTAACATTCCTTTCAGAA +
Preference number: 2 (lower is better)
Translates to: TATADEGFPTPSSSGREAQGVAA*VTFLSE
Trigger: TTCTGAAAGGAATGTTACTCAAGCTGCCACTCCCTG...TGCCTCTCTTCCGGAAGAAGATGGTGTGGGAAATCCTTCATCAGCAGTTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR-3UTR CCA 90 bp GAACACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTTGTCACTCTGATCTTTaGATAGTCACTTATTCCATT +
Preference number: 2 (lower is better)
Translates to: EHPPPQYNGDASDPCHSLCHSDL*IVTYSI
Trigger: AATGGAATAAGTGACTATCCAAAGATCAGAGTGACA...AAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453532.5
3UTR-3UTR TCA 90 bp TACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTACCTGTGAGAACAGAATGTTCTTGTGTGGGTTaGACAGTCCAAAGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: YSERPSCTFDSSVPVRTECSCVG*TVQSSE
Trigger: CTCAGAGCTTTGGACTGTTCAACCCACACAAGAACA...TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR-3UTR TCA 90 bp CCCAGCCTTTGGTCTTTAATGTGTCCATCTGACTTCTTTGAGAACTGTGATAATAGGACTCTGCGTGGCTaGTCTCGGGTAACTGTCACT +
Preference number: 2 (lower is better)
Translates to: PSLWSLMCPSDFFENCDNRTLRG*SRVTVT
Trigger: AGTGACAGTTACCCGAGATCAGCCACGCAGAGTCCT...ATTATCACAGTTCTCAAAGAAGTCAGATGGACACATTAAAGACCAAAGGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR-3UTR GCA 90 bp TCTGAGCAGGCACAGCCTTACAAACAGGATTGCAAGCAGCCCTCTGCACCCCAACTTTTTAACCCACAATaGATGAGGTATATGGAAATG +
Preference number: 2 (lower is better)
Translates to: SEQAQPYKQDCKQPSAPQLFNPQ*MRYMEM
Trigger: CATTTCCATATACCTCATGCATTGTGGGTTAAAAAG...TTGGGGTGCAGAGGGCTGCTTGCAATCCTGTTTGTAAGGCTGTGCCTGCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR-3UTR TCA 90 bp CCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAATGTTTGCAAACGAGTaGGTGAATGAATACGCTGAA +
Preference number: 2 (lower is better)
Translates to: PKSGLEYSERPSCTFDSSMFANE*VNEYAE
Trigger: TTCAGCGTATTCATTCACTCACTCGTTTGCAAACAT...TGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR-3UTR TCA 90 bp CCTCAAAATAATACATTAAGCTCAGCATCATTCACGTGGGCGGAATACAAACTGCACACTGATGCCTGGTaGAAGCCAGGCGTTTGGTAT +
Preference number: 2 (lower is better)
Translates to: PQNNTLSSASFTWAEYKLHTDAW*KPGVWY
Trigger: ATACCAAACGCCTGGCTTTCACCAGGCATCAGTGTG...CAGTTTGTATTCCGCCCACGTGAATGATGCTGAGCTTAATGTATTATTTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CCA 90 bp TTACCCAGTTTCAGCATGTTGTTCCAGGATCCAGAACCTGTCAGTTCACAAGATAAGCAGAAGTTACCATaGGCTTTGTGGTCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: LPSFSMLFQDPEPVSSQDKQKLP*ALWSAG
Trigger: TCCAGCTGACCACAAAGCCCATGGTAACTTCTGCTT...ATCTTGTGAACTGACAGGTTCTGGATCCTGGAACAACATGCTGAAACTGGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458551.1
3UTR-3UTR TCA 90 bp TACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTACCTGTGAGAACAGAAATATGGAAATGTCTGTaGAAGAACCACCAGCAGCTA +
Preference number: 2 (lower is better)
Translates to: YSERPSCTFDSSVPVRTEIWKCL*KNHQQL
Trigger: TAGCTGCTGGTGGTTCTTTCACAGACATTTCCATAT...TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR-3UTR TCA 90 bp CCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGAGGTTTCCTTAACCCACAATGCATaGGGTATATGGAAATGTCTG +
Preference number: 2 (lower is better)
Translates to: PCHSLQKSSLLQPVPEVSLTHNA*GIWKCL
Trigger: CAGACATTTCCATATACCTCATGCATTGTGGGTTAA...GGAAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR-3UTR TCA 90 bp TTATGTCCTGCAAGTTTTAAGAGCCGTCCGGAAGAGTGTAGGTTAATGGAAAGCGAAGTCTCTTTAAGGTaGCCACAACACTCTTCGGAA +
Preference number: 2 (lower is better)
Translates to: LCPASFKSRPEECRLMESEVSLR*PQHSSE
Trigger: TTCCGAAGAGTGTTGTGGTCACCTTAAAGAGACTTC...GCTTTCCATTAACCTACACTCTTCCGGACGGCTCTTAAAACTTGCAGGACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR TCA 90 bp CCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCATTGCAAAATATGTTCTaGCCAACTCTAAACTGTCTG +
Preference number: 2 (lower is better)
Translates to: PKSGLEYSERPSCTFDSSLQNMF*PTLNCL
Trigger: CAGACAGTTTAGAGTTGGTCAGAACATATTTTGCAA...TGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR TCA 90 bp TACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTACCTGTGAGAACAGAATACCTCTTGCTTTTATaGACCAGAACAAGTCTGGGA +
Preference number: 2 (lower is better)
Translates to: YSERPSCTFDSSVPVRTEYLLLL*TRTSLG
Trigger: TCCCAGACTTGTTCTGGTTCATAAAAGCAAGAGGTA...TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR TCA 90 bp CAAAGAGATTTACCCCTTTGGTCCATCGTTTCACTGCTTGGTAACCCCCAGACTCAAACTGAGTTGTTTTaGCTCCGTGATTTTGCTCTT +
Preference number: 2 (lower is better)
Translates to: QRDLPLWSIVSLLGNPQTQTELF*LRDFAL
Trigger: AAGAGCAAAATCACGGAGTCAAAACAACTCAGTTTG...AGTCTGGGGGTTACCAAGCAGTGAAACGATGGACCAAAGGGGTAAATCTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR-3UTR GCA 90 bp CCTCAAAATAATACATTAAGCTCAGCATCATTCACGTGGGCGGAATACAAACTGCATGTTGGCAGTTACTaGTCCAGCTCCACTTCCTTC +
Preference number: 2 (lower is better)
Translates to: PQNNTLSSASFTWAEYKLHVGSY*SSSTSF
Trigger: GAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATG...CAGTTTGTATTCCGCCCACGTGAATGATGCTGAGCTTAATGTATTATTTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR GCA 90 bp CCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCACTAGGCACTAGATCTTaGAAAATATGTTCTGACCAA +
Preference number: 2 (lower is better)
Translates to: PKSGLEYSERPSCTFDSSLGTRS*KICSDQ
Trigger: TTGGTCAGAACATATTTTGCAAGATCTAGTGCCTAG...TGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CCA 90 bp AGCATGTTGTTCCAGGATCCAGAACCTGTCAGTTCACAAGATGAAGAGTTCGAAGGCTTTGTGGTCAGCTaGAATGGGAATCCAAATAAG +
Preference number: 2 (lower is better)
Translates to: SMLFQDPEPVSSQDEEFEGFVVS*NGNPNK
Trigger: CTTATTTGGATTCCCATTCCAGCTGACCACAAAGCC...TTCGAACTCTTCATCTTGTGAACTGACAGGTTCTGGATCCTGGAACAACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458551.1
3UTR-3UTR CCA 90 bp TGGCAACCTCAGAGCCAAGTACTAAATTTTCTTCCACAAATTTCAGTGGGGATGGCGTTTGTTCTTGTGTaGGTTGAACAGTCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: WQPQSQVLNFLPQISVGMAFVLV*VEQSKA
Trigger: AGCTTTGGACTGTTCAACCCACACAAGAACAAACGC...CATCCCCACTGAAATTTGTGGAAGAAAATTTAGTACTTGGCTCTGAGGTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR CAA 90 bp CCTCACAGCAGGAAGACATCCGCTATCAGACATGGTTTTCTGAAGTaGTGCTTAGGATTTCAGAGGAGGAAAAATTCAGAGGTTCTAATA +
Preference number: 2 (lower is better)
Translates to: PHSRKTSAIRHGFLK*CLGFQRRKNSEVLI
Trigger: TATTAGAACCTCTGAATTTTTCCTCCTCTGAAATCCTAAGCACAACTTCAGAAAACCATGTCTGATAGCGGATGTCTTCCTGCTGTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR TCA 90 bp AAAACTATATTACTAACATGTTTCCTTATGCCAAGGGAGACATGTGAGTGCCTAGCCTTCATGCACTTTTaGCAGCTCAGTACCTGTGAG +
Preference number: 2 (lower is better)
Translates to: KTILLTCFLMPRETCECLAFMHF*QLSTCE
Trigger: CTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGC...TAGGCACTCACATGTCTCCCTTGGCATAAGGAAACATGTTAGTAATATAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR GCA 90 bp ACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCCTTTTTAACCCACAATaGATGAGGTATATGGAAATG +
Preference number: 2 (lower is better)
Translates to: TLKNSLDYLCYGDGHLVFLFNPQ*MRYMEM
Trigger: CATTTCCATATACCTCATGCATTGTGGGTTAAAAAG...GAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR-3UTR GCA 90 bp GACTCGATCTTAACCATGGTACCAAACTCTCAAGTGAAGCACACTGATGCCTGGTCCAGTTTTACCTCTTaGTTTTATGAACCAGAACAA +
Preference number: 2 (lower is better)
Translates to: DSILTMVPNSQVKHTDAWSSFTS*FYEPEQ
Trigger: TTGTTCTGGTTCATAAAAGCAAGAGGTAAAACTGGA...CCAGGCATCAGTGTGCTTCACTTGAGAGTTTGGTACCATGGTTAAGATCGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CCA 90 bp CCTCAAAATAATACATTAAGCTCAGCATCATTCACGTGGGCGGAATACAAACTGTCAGTGGGGATGGAGTaGGGAGATGTTAGTCTTAAT +
Preference number: 2 (lower is better)
Translates to: PQNNTLSSASFTWAEYKLSVGME*GDVSLN
Trigger: ATTAAGACTAACATCTCCCCACTCCATCCCCACTGA...CAGTTTGTATTCCGCCCACGTGAATGATGCTGAGCTTAATGTATTATTTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CCA 90 bp AAAACTATATTACTAACATGTTTCCTTATGCCAAGGGAGACATGTGAGTGCCTAGACCTAGTGAACCTCTaGCCTTTTTGGCTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: KTILLTCFLMPRETCECLDLVNL*PFWLCS
Trigger: TGAGCACAGCCAAAAAGGCCAGAGGTTCACTAGGTC...TAGGCACTCACATGTCTCCCTTGGCATAAGGAAACATGTTAGTAATATAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CCA 90 bp ACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGAGGTTTTGTCACTCTGATCTTTaGATAGTCACTTATTCCATT +
Preference number: 2 (lower is better)
Translates to: TLATLFRNHLCYSLFLRFCHSDL*IVTYSI
Trigger: AATGGAATAAGTGACTATCCAAAGATCAGAGTGACA...AAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439684.5
ENST00000453532.5
3UTR-3UTR GCA 90 bp AAAACTATATTACTAACATGTTTCCTTATGCCAAGGGAGACATGTGAGTGCCTAAGTGAGAGGCCTTCATaGACTTTTGACAGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: KTILLTCFLMPRETCECLSERPS*TFDSSV
Trigger: TACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACT...TAGGCACTCACATGTCTCCCTTGGCATAAGGAAACATGTTAGTAATATAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR GCA 90 bp AAAACTATATTACTAACATGTTTCCTTATGCCAAGGGAGACATGTGAGTGCCTATCAAGCAGAAGGCCATaGTATAGACTTCAACACTCT +
Preference number: 2 (lower is better)
Translates to: KTILLTCFLMPRETCECLSSRRP*YRLQHS
Trigger: AGAGTGTTGAAGTCTATAGCATGGCCTTCTGCTTGA...TAGGCACTCACATGTCTCCCTTGGCATAAGGAAACATGTTAGTAATATAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CCA 90 bp TGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGAGATTTATTACCCAGGGAATCCAAATAAGCTaGCAGCATTGTAGAGACTGT +
Preference number: 2 (lower is better)
Translates to: CHSDLWIVTYSIRRFITQGIQIS*QHCRDC
Trigger: ACAGTCTCTACAATGCTGCCAGCTTATTTGGATTCC...CTGGGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458551.1
3UTR GCA 72 bp GTGCTCATTACCTGGTCCCAGCACTCACTGGCACAATaGCAGGAGCCCAGAGAAAGGAGCAGGGGCTGCGGG +
Preference number: 3 (lower is better)
Translates to: VLITWSQHSLAQ*QEPRERSRGCG
Trigger: CCCGCAGCCCCTGCTCCTTTCTCTGGGCTCCTGGCATTGTGCCAGTGAGTGCTGGGACCAGGTAATGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR TCA 72 bp CCCGCTTCAGTCATCACCCACCACATGGCCTCTGGCTaGCCATCCAGTAGGCCCAGCATTTTCCATCCACAC +
Preference number: 3 (lower is better)
Translates to: PASVITHHMASG*PSSRPSIFHPH
Trigger: GTGTGGATGGAAAATGCTGGGCCTACTGGATGGTCAGCCAGAGGCCATGTGGTGGGTGATGACTGAAGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CAA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCCCCTCCAGCTTCATGTaGGCAGTTACTGCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPPSSFM*AVTAPA
Trigger: AGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGG...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR GCA 72 bp CTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTaGTCTTCAGCAGGGAGTGGCAGCTTGAGTAACATT +
Preference number: 3 (lower is better)
Translates to: LHFLPPPVRVPS*SSAGSGSLSNI
Trigger: AATGTTACTCAAGCTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR CCA 72 bp TACAACCTGCTCCCGCTTCAGTCATCACCCACCACATaGCCTCTGGCTGACCATCCAGTAGGCCCAGCATTT +
Preference number: 3 (lower is better)
Translates to: YNLLPLQSSPTT*PLADHPVGPAF
Trigger: AAATGCTGGGCCTACTGGATGGTCAGCCAGAGGCCATGTGGTGGGTGATGACTGAAGCGGGAGCAGGTTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR CCA 72 bp AGTGAACCTCTGGCCTTTTTGGCTGTGCTCATTACCTaGTCCCAGCACTCACTGGCACAATGCCAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: SEPLAFLAVLIT*SQHSLAQCQEP
Trigger: GGGCTCCTGGCATTGTGCCAGTGAGTGCTGGGACCAGGTAATGAGCACAGCCAAAAAGGCCAGAGGTTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR GCA 72 bp AGTCCCTTGGGCACAGTTCCACTGTTCACGGCACTGTaGCAACGCTGTAGTGTCAGACTTCCTCTGAAAGGC +
Preference number: 3 (lower is better)
Translates to: SPLGTVPLFTAL*QRCSVRLPLKG
Trigger: GCCTTTCAGAGGAAGTCTGACACTACAGCGTTGGCACAGTGCCGTGAACAGTGGAACTGTGCCCAAGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CAA 90 bp CCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCACTCCTGAGTAAGCCATaGCTTCCACTGCCCAGGCGG +
Preference number: 3 (lower is better)
Translates to: PKSGLEYSERPSCTFDSSLLSKP*LPLPRR
Trigger: CCGCCTGGGCAGTGGAAGCAATGGCTTACTCAGGAG...TGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR CCA 72 bp GTATACCTCTGGGACCAGCAGCCGGAGCACTGCAAATaGCAGGCGTGTAGATTCATAGGTAACACGTGCACA +
Preference number: 3 (lower is better)
Translates to: VYLWDQQPEHCK*QACRFIGNTCT
Trigger: TGTGCACGTGTTACCTATGAATCTACACGCCTGCCATTTGCAGTGCTCCGGCTGCTGGTCCCAGAGGTATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR CCA 72 bp CCAGGCGTTTGGTATGATGCTGACCTAGTGAACCTCTaGCCTTTTTGGCTGTGCTCATTACCTGGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: PGVWYDADLVNL*PFWLCSLPGPS
Trigger: GCTGGGACCAGGTAATGAGCACAGCCAAAAAGGCCAGAGGTTCACTAGGTCAGCATCATACCAAACGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR GCA 72 bp CCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTaGCACTCTCTTCAGAAATCATCTCTGTTACAGCCT +
Preference number: 3 (lower is better)
Translates to: PPPQYNGDASDP*HSLQKSSLLQP
Trigger: AGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
3UTR CCA 72 bp CACTCTTCGGAAGATGCTTGGATAATCAGAGTCCCTTaGGCACAGTTCCACTGTTCACGGCACTGTGCCAAC +
Preference number: 3 (lower is better)
Translates to: HSSEDAWIIRVP*AQFHCSRHCAN
Trigger: GTTGGCACAGTGCCGTGAACAGTGGAACTGTGCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CAA 90 bp CCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGCCTTACAAACAGGATaGCAAGCAGCCCTCTGCACC +
Preference number: 3 (lower is better)
Translates to: PKSGLEYSERPSCTFDSSALQTG*QAALCT
Trigger: GGTGCAGAGGGCTGCTTGCAATCCTGTTTGTAAGGC...TGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR-3UTR CAA 90 bp TCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCCTTCTCTCTGGATTACCTTaGCTATGGCGACGGCCACCT +
Preference number: 3 (lower is better)
Translates to: SLDYLCYGDGHLVFYYSLLSGLP*LWRRPP
Trigger: AGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAG...AAGGCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR-3UTR CAA 90 bp ACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTCTCTCTGGATTACCTTaGCTATGGCGACGGCCACCT +
Preference number: 3 (lower is better)
Translates to: TVQWGRLRPLPLSSEIISLSGLP*LWRRPP
Trigger: AGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAG...AGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR-3UTR CAA 90 bp ACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGAGGTTTGGACGCCTCAGACCCTaGCCACTCTCTTCAGAAATC +
Preference number: 3 (lower is better)
Translates to: TLATLFRNHLCYSLFLRFGRLRP*PLSSEI
Trigger: GATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCC...AAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR TCA 72 bp GTACCAAACTCTCAAGTGAAGCACACTGATGCCTGGTaGAAGCCAGGCGTTTGGTATGATGCTGACCTAGTG +
Preference number: 3 (lower is better)
Translates to: VPNSQVKHTDAW*KPGVWYDADLV
Trigger: CACTAGGTCAGCATCATACCAAACGCCTGGCTTTCACCAGGCATCAGTGTGCTTCACTTGAGAGTTTGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR CCA 72 bp AGGGAGACATGTGAGTGCCTAGAGAAGTATGGCCTGTaGTCTCCCACATTCAATTCAGGAACTCAGGGTCAA +
Preference number: 3 (lower is better)
Translates to: RETCECLEKYGL*SPTFNSGTQGQ
Trigger: TTGACCCTGAGTTCCTGAATTGAATGTGGGAGACCACAGGCCATACTTCTCTAGGCACTCACATGTCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR GCA 72 bp CCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATaGACTTTTGACAGCTCAGTACCTGTGAGAACAGAA +
Preference number: 3 (lower is better)
Translates to: PKSGLEYSERPS*TFDSSVPVRTE
Trigger: TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR CCA 72 bp GTTCAAAGTAAAACCAAAGGAAGGCAGGACTCTGCGTaGCTGATCTCGGGTAACTGTCACTCTGATCTTTGG +
Preference number: 3 (lower is better)
Translates to: VQSKTKGRQDSA*LISGNCHSDLW
Trigger: CCAAAGATCAGAGTGACAGTTACCCGAGATCAGCCACGCAGAGTCCTGCCTTCCTTTGGTTTTACTTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR-3UTR CAA 90 bp ACAGCAACTGCTGATGAAGGATTTCCCACACCATCTTCTTCCGGAAGAGAGGCAAAGAGATTTACCCCTTaGGTCCATCGTTTCACTGCT +
Preference number: 3 (lower is better)
Translates to: TATADEGFPTPSSSGREAKRFTP*VHRFTA
Trigger: AGCAGTGAAACGATGGACCAAAGGGGTAAATCTCTT...TGCCTCTCTTCCGGAAGAAGATGGTGTGGGAAATCCTTCATCAGCAGTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR GCA 72 bp AGTCTCTTTAAGGTGACCACAACACTCTTCGGAAGATaGTTGGATAATCAGAGTCCCTTGGGCACAGTTCCA +
Preference number: 3 (lower is better)
Translates to: SLFKVTTTLFGR*LDNQSPLGTVP
Trigger: TGGAACTGTGCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCACCTTAAAGAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR GCA 72 bp GAGGTTTCCACATTAAAGAACTCTCTGGATTACCTTTaGTATGGCGACGGCCACCTGGTCTTCTATTACAGC +
Preference number: 3 (lower is better)
Translates to: EVSTLKNSLDYL*YGDGHLVFYYS
Trigger: GCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAAACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR-3UTR CAA 90 bp TGGCAACCTCAGAGCCAAGTACTAAATTTTCTTCCACAAATTTCAGTGGGGATGGCAGGGAGTGGCAGCTaGAGTAACATTCCTTTCAGA +
Preference number: 3 (lower is better)
Translates to: WQPQSQVLNFLPQISVGMAGSGS*SNIPFR
Trigger: TCTGAAAGGAATGTTACTCAAGCTGCCACTCCCTGC...CATCCCCACTGAAATTTGTGGAAGAAAATTTAGTACTTGGCTCTGAGGTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CAA 90 bp GATCCAGAACCTGTCAGTTCACAAGATGAAGAGTTCGAAAATACCTCTCCTGAACCCAGTTTCAGCATGTaGTTCCAGGATCCAGAACCT +
Preference number: 3 (lower is better)
Translates to: DPEPVSSQDEEFENTSPEPSFSM*FQDPEP
Trigger: AGGTTCTGGATCCTGGAACAACATGCTGAAACTGGG...TTCAGGAGAGGTATTTTCGAACTCTTCATCTTGTGAACTGACAGGTTCTGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458551.1
3UTR CCA 72 bp TTCCACATTAAAGAACTCTCTGGATTACCTTTGCTATaGCGACGGCCACCTGGTCTTCTATTACAGCCTTCT +
Preference number: 3 (lower is better)
Translates to: FHIKELSGLPLL*RRPPGLLLQPS
Trigger: AGAAGGCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR CCA 72 bp CCACATTCCGTGTTCCATTACAAGCAGAAGTTACCATaGGCTTTGTGGTCAGCTGGAATGGGAATCCAAATA +
Preference number: 3 (lower is better)
Translates to: PHSVFHYKQKLP*ALWSAGMGIQI
Trigger: TATTTGGATTCCCATTCCAGCTGACCACAAAGCCCATGGTAACTTCTGCTTGTAATGGAACACGGAATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458551.1
3UTR GCA 72 bp ATTCAATTCAGGAACTCAGGGTCAAGCAGAAGGCCATaGTATAGACTTCAACACTCTGCTCTTCCCAATTTC +
Preference number: 3 (lower is better)
Translates to: IQFRNSGSSRRP*YRLQHSALPNF
Trigger: GAAATTGGGAAGAGCAGAGTGTTGAAGTCTATAGCATGGCCTTCTGCTTGACCCTGAGTTCCTGAATTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR-3UTR CAA 90 bp TTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAACCACCAGCAGATCCTGTGGCCCTTTaGTCCCATAGAATCCAGATA +
Preference number: 3 (lower is better)
Translates to: FNPQCMRYMEMSVKEPPADPVAL*SHRIQI
Trigger: TATCTGGATTCTATGGGACAAAAGGGCCACAGGATC...TGCTGGTGGTTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR-3UTR CAA 90 bp TCGGGTAACTGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGAGATTTCCCAGTTTCAGCATGTaGTTCCAGGATCCAGAACCT +
Preference number: 3 (lower is better)
Translates to: SGNCHSDLWIVTYSIRRFPSFSM*FQDPEP
Trigger: AGGTTCTGGATCCTGGAACAACATGCTGAAACTGGG...AAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTTACCCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439684.5
ENST00000458551.1
3UTR TCA 72 bp AGGTCAATCACCACCAGGCTCCAATGTACCTTCCGATaGATAGGCACCAGAATAATTTCTTGTTCAAAGAGA +
Preference number: 3 (lower is better)
Translates to: RSITTRLQCTFR*IGTRIISCSKR
Trigger: TCTCTTTGAACAAGAAATTATTCTGGTGCCTATTCATCGGAAGGTACATTGGAGCCTGGTGGTGATTGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR CCA 72 bp GCGTGGCTGATCTCGGGTAACTGTCACTCTGATCTTTaGATAGTCACTTATTCCATTAGGAGATTTATTACC +
Preference number: 3 (lower is better)
Translates to: AWLISGNCHSDL*IVTYSIRRFIT
Trigger: GGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTTACCCGAGATCAGCCACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439684.5
ENST00000453532.5
3UTR TCA 72 bp TTTGAAATAAACAGCTCAGGCCAGCCCCTACAATTCTaGGGTTTATACTCAACCAGATCTGGGATGAAAATG +
Preference number: 3 (lower is better)
Translates to: FEINSSGQPLQF*GLYSTRSGMKM
Trigger: CATTTTCATCCCAGATCTGGTTGAGTATAAACCTCAGAATTGTAGGGGCTGGCCTGAGCTGTTTATTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR TCA 72 bp CTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTaGGGTTTCCACATTAAAGAACTCTCTGGATTACCT +
Preference number: 3 (lower is better)
Translates to: LSSEIISVTACS*GFHIKELSGLP
Trigger: AGGTAATCCAGAGAGTTCTTTAATGTGGAAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
3UTR TCA 72 bp AATGACCACTGCCCATTATGTTTGCAAACGAGTGAGTaGATGAATACGCTGAACAAACACACAGAAACAAAC +
Preference number: 3 (lower is better)
Translates to: NDHCPLCLQTSE*MNTLNKHTETN
Trigger: GTTTGTTTCTGTGTGTTTGTTCAGCGTATTCATTCACTCACTCGTTTGCAAACATAATGGGCAGTGGTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR GCA 72 bp AAGACATCCGCTATCAGACATGGTTTTCTGAAGTTGTaGTTAGGATTTCAGAGGAGGAAAAATTCAGAGGTT +
Preference number: 3 (lower is better)
Translates to: KTSAIRHGFLKL*LGFQRRKNSEV
Trigger: AACCTCTGAATTTTTCCTCCTCTGAAATCCTAAGCACAACTTCAGAAAACCATGTCTGATAGCGGATGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR CCA 72 bp GCCCCTACAATTCTGAGGTTTATACTCAACCAGATCTaGGATGAAAATGAAGATTTAGGGTTTACAGTTACT +
Preference number: 3 (lower is better)
Translates to: APTILRFILNQI*DENEDLGFTVT
Trigger: AGTAACTGTAAACCCTAAATCTTCATTTTCATCCCAGATCTGGTTGAGTATAAACCTCAGAATTGTAGGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp CAGCTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGCCATTGCTTCCACTaGCCAGGCGGAGTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: QLHFLPPPVRVPSCSSAGSHCFH*PGGVGP
Trigger: CGGCCCGACTCCGCCTGGGCAGTGGAAGCAATGGCT...CCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR TCA 90 bp CTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGCACATGGCCTCTGGCTaGCCATCCAGTAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LPSAPSESSLLLFSREWQHMASG*PSSRPS
Trigger: GCTGGGCCTACTGGATGGTCAGCCAGAGGCCATGTG...CTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGGGCAGGAGAATCGCTTaGACCTGGGAGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: LPSAPSESSLLLFSREWQGRRIA*TWEVGV
Trigger: AACCCCCACCTCCCAGGTTCAAGCGATTCTCCTGCC...CTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp CACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAGCCATTGCTTCCACTaGCCAGGCGGAGTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: HPPPQYNGDASDPCHSLQSHCFH*PGGVGP
Trigger: CGGCCCGACTCCGCCTGGGCAGTGGAAGCAATGGCT...CTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp CTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGAAACAGAGTGCTGTCTaGGCGCCGCCTCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LPSAPSESSLLLFSREWQKQSAV*APPLQE
Trigger: CTCCTGAAGAGGCGGCGCTCAGACAGCACTCTGTTT...CTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR TCA 90 bp CTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGAGGACTCTGCGTGGCTaGTCTCGGGTAACTGTCACT +
Preference number: 4 (lower is better)
Translates to: LPSAPSESSLLLFSREWQRTLRG*SRVTVT
Trigger: AGTGACAGTTACCCGAGATCAGCCACGCAGAGTCCT...CTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CCA 90 bp CAGCTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGTCCTCCACAGTACAATaGGGACGCCTCAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: QLHFLPPPVRVPSCSSAGSSTVQ*GRLRPL
Trigger: CAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGA...CCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CCA 90 bp CCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGCTTGAGTTCATCACCCACCACATaGCCTCTGGCTGACCATCCA +
Preference number: 4 (lower is better)
Translates to: PPPVRVPSCSSAGSGSLSSSPTT*PLADHP
Trigger: TGGATGGTCAGCCAGAGGCCATGTGGTGGGTGATGA...ACTCAAGCTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAACAGAGTGCTGTCTaGGCGCCGCCTCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: HPPPQYNGDASDPCHSLQKQSAV*APPLQE
Trigger: CTCCTGAAGAGGCGGCGCTCAGACAGCACTCTGTTT...CTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR TCA 90 bp CTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGGTGTCAGACTTCCTCTaGAAGGCAACAGGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: LPSAPSESSLLLFSREWQVSDFL*KATGAL
Trigger: TAGGGCTCCTGTTGCCTTTCAGAGGAAGTCTGACAC...CTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp CAGCTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGCCTCCAGCTTCATGTTaGCAGTTACTGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QLHFLPPPVRVPSCSSAGPPASC*QLLLQL
Trigger: GAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGG...CCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR TCA 90 bp CAGCTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAACAGTCCAAAGCTCTaGGCAGGCACAGCCTTACAA +
Preference number: 4 (lower is better)
Translates to: QLHFLPPPVRVPSCSSAGNSPKL*AGTALQ
Trigger: TTGTAAGGCTGTGCCTGCTCAGAGCTTTGGACTGTT...CCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR TCA 90 bp TACCTCTGGGACCAGCAGCCGGAGCACTGCAAATGGCAGGCGTGTAGATTCATATCCTTCCGCCCCCAGTaGGAGTTCCCTCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: YLWDQQPEHCKWQACRFISFRPQ*EFPPAL
Trigger: AAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGA...TATGAATCTACACGCCTGCCATTTGCAGTGCTCCGGCTGCTGGTCCCAGAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp CAGCTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGCATGTTGGCAGTTACTaGTCCAGCTCCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: QLHFLPPPVRVPSCSSAGHVGSY*SSSTSF
Trigger: GAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATG...CCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CCA 90 bp CACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAGGCAGGACTCTGCGTaGCTGATCTCGGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: HPPPQYNGDASDPCHSLQRQDSA*LISGNC
Trigger: ACAGTTACCCGAGATCAGCCACGCAGAGTCCTGCCT...CTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR TCA 90 bp GAGAGGTGTGGTACAACCTGCTCCCGCTTCAGTCATCACCCACCACATGGCCTCCGAAAATACCTCTCCTaGAGGGGCCACATTCCGTGT +
Preference number: 4 (lower is better)
Translates to: ERCGTTCSRFSHHPPHGLRKYLS*RGHIPC
Trigger: ACACGGAATGTGGCCCCTTCAGGAGAGGTATTTTCG...GAGGCCATGTGGTGGGTGATGACTGAAGCGGGAGCAGGTTGTACCACACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGAGGACTAGAGTACAGTaGGAGGCCTTCATGCACTTT +
Preference number: 4 (lower is better)
Translates to: LPSAPSESSLLLFSREWQRTRVQ*EAFMHF
Trigger: AAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCT...CTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR TCA 90 bp CTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGTGTTCTTGTGTGGGTTaGACAGTCCAAAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LPSAPSESSLLLFSREWQCSCVG*TVQSSE
Trigger: CTCAGAGCTTTGGACTGTTCAACCCACACAAGAACA...CTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR TCA 90 bp TACCTCTGGGACCAGCAGCCGGAGCACTGCAAATGGCAGGCGTGTAGATTCATAAGGTGGGGGTTGCAGTaGGCTGAGATAGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: YLWDQQPEHCKWQACRFIRWGLQ*AEIAPL
Trigger: CAATGGCGCTATCTCAGCTCACTGCAACCCCCACCT...TATGAATCTACACGCCTGCCATTTGCAGTGCTCCGGCTGCTGGTCCCAGAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp AACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCAGCTGTCGCCGCCGCTaGCGCCTTCGCCGTCTTAAC +
Preference number: 4 (lower is better)
Translates to: NSLDYLCYGDGHLVFYYSSCRRR*RLRRLN
Trigger: GTTAAGACGGCGAAGGCGGCAGCGGCGGCGACAGCT...GCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR GCA 90 bp ACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCTGTCGCCGCCGCTaGCGCCTTCGCCGTCTTAAC +
Preference number: 4 (lower is better)
Translates to: TMGTPQTLATLFRNHLCYSCRRR*RLRRLN
Trigger: GTTAAGACGGCGAAGGCGGCAGCGGCGGCGACAGCT...GTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR GCA 90 bp CCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGCTTGAGTAAGCTCAGTGAGAACTaGTCTGAAGAAGCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: PPPVRVPSCSSAGSGSLSKLSEN*SEEAPQ
Trigger: TTGAGGGGCTTCTTCAGAGCAGTTCTCACTGAGCTT...ACTCAAGCTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCAGGCAGGACTCTGCGTaGCTGATCTCGGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPRQDSA*LISGNC
Trigger: ACAGTTACCCGAGATCAGCCACGCAGAGTCCTGCCT...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CCA 90 bp CAGCTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAAAATTAGCAGGGTGTaGTGGTGGGCACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: QLHFLPPPVRVPSCSSAGKISRV*WWAPVI
Trigger: GATTACAGGTGCCCACCACCACACCCTGCTAATTTT...CCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGCTTGAGTTCTCTTTCCTCTTTTTaGACACCCTCCTCCACAGTA +
Preference number: 4 (lower is better)
Translates to: PPPVRVPSCSSAGSGSLSSLSSF*TPSSTV
Trigger: TACTGTGGAGGAGGGTGTTCAAAAAGAGGAAAGAGA...ACTCAAGCTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR TCA 90 bp CTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGTGTGGTTTCATGCTGTaGTGGGTCCACTCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: LPSAPSESSLLLFSREWQCGFML*WVHSKR
Trigger: TCTTTTAGAGTGGACCCATCACAGCATGAAACCACA...CTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR TCA 90 bp CCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTTCCTTCCGCCCCCAGTaGGAGTTCCCTCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PQYNGDASDPCHSLQKSSSFRPQ*EFPPAL
Trigger: AAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGA...AGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp CCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGCTTGAGTGAAGTCTCTTTAAGGTaGCCACAACACTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: PPPVRVPSCSSAGSGSLSEVSLR*PQHSSE
Trigger: TTCCGAAGAGTGTTGTGGTCACCTTAAAGAGACTTC...ACTCAAGCTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGCAGCCCCTACAATTCTaGGGTTTATACTCAACCAGA +
Preference number: 4 (lower is better)
Translates to: LPSAPSESSLLLFSREWQQPLQF*GLYSTR
Trigger: TCTGGTTGAGTATAAACCTCAGAATTGTAGGGGCTG...CTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CACTGCCCAGGCGGAGTCGGGCCGACACTTCTTCTGATAGGTCAGGCTCCAGTTATTTATTACCTCTCCTaGAGGGGCCACATTCCGTGT +
Preference number: 4 (lower is better)
Translates to: HCPGGVGPTLLLIGQAPVIYYLS*RGHIPC
Trigger: ACACGGAATGTGGCCCCTTCAGGAGAGGTAATAAAT...AACTGGAGCCTGACCTATCAGAAGAAGTGTCGGCCCGACTCCGCCTGGGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR GCA 90 bp TGGGCTTTGTGGTCAGCTGGAATGGGAATCCAAATAAGCTGGCAGCATTGTAGAAGCTGTCGCCGCCGCTaGCGCCTTCGCCGTCTTAAC +
Preference number: 4 (lower is better)
Translates to: WALWSAGMGIQISWQHCRSCRRR*RLRRLN
Trigger: GTTAAGACGGCGAAGGCGGCAGCGGCGGCGACAGCT...TCTACAATGCTGCCAGCTTATTTGGATTCCCATTCCAGCTGACCACAAAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458551.1
CDS-3UTR GCA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCTCTCTGGATTACCTTTaGTATGGCGACGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPSLDYL*YGDGHL
Trigger: CAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGA...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CCA 90 bp CAGCTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGGGCTTTGTGGTCAGCTaGAATGGGAATCCAAATAAG +
Preference number: 4 (lower is better)
Translates to: QLHFLPPPVRVPSCSSAGGFVVS*NGNPNK
Trigger: CTTATTTGGATTCCCATTCCAGCTGACCACAAAGCC...CCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CCA 90 bp CCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGCTTGAGTTTGAGGAATCTCGTGTaGTTTCATGCTGTGATGGGT +
Preference number: 4 (lower is better)
Translates to: PPPVRVPSCSSAGSGSLSLRNLV*FHAVMG
Trigger: ACCCATCACAGCATGAAACCACACGAGATTCCTCAA...ACTCAAGCTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR TCA 90 bp CCTCTCCTGAAGGGGCCACATTCCGTGTTCCATTACAAGCAGAAGTTACCATGGAAACAGAGTGCTGTCTaGGCGCCGCCTCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PLLKGPHSVFHYKQKLPWKQSAV*APPLQE
Trigger: CTCCTGAAGAGGCGGCGCTCAGACAGCACTCTGTTT...CCATGGTAACTTCTGCTTGTAATGGAACACGGAATGTGGCCCCTTCAGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458551.1
CDS-3UTR TCA 90 bp CTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGCAGACAGAGTTTCCATaGCCACTTTCTTTAAGTCGT +
Preference number: 4 (lower is better)
Translates to: LPSAPSESSLLLFSREWQQTEFP*PLSLSR
Trigger: ACGACTTAAAGAAAGTGGTCATGGAAACTCTGTCTG...CTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR TCA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCATAGCCTTCGGTAACTaGGGTAGAATATGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPIAFGN*GRIWGS
Trigger: GGAGCCCCATATTCTACCTCAGTTACCGAAGGCTAT...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp TCTGAGCAGGCACAGCCTTACAAACAGGATTGCAAGCAGCCCTCTGCACCCCAATCTCTGGATTACCTTTaGTATGGCGACGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: SEQAQPYKQDCKQPSAPQSLDYL*YGDGHL
Trigger: CAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGA...TTGGGGTGCAGAGGGCTGCTTGCAATCCTGTTTGTAAGGCTGTGCCTGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CCA 90 bp CAGCTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGTCTTGGTCTTTTGGCTaGTATTTCATCAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: QLHFLPPPVRVPSCSSAGSWSFG*YFISVH
Trigger: GTGGACACTGATGAAATACCAGCCAAAAGACCAAGA...CCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR CAA 72 bp GTTTCTACTAGGATACATTCCGCCCACACCCACACCTaGGTCCCCACATCAAGCAGCTCCTCACAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VSTRIHSAHTHT*VPTSSSSSQQE
Trigger: TTCCTGCTGTGAGGAGCTGCTTGATGTGGGGACCAAGGTGTGGGTGTGGGCGGAATGTATCCTAGTAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR CAA 72 bp CCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTaGCCACTCTCTTCAGAAATCATCTCTGTTACAGCC +
Preference number: 4 (lower is better)
Translates to: PSSTVQWGRLRP*PLSSEIISVTA
Trigger: GGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
3UTR CAA 72 bp GTCTCAATTATTGACACTTTCCTCCTGAGTAAGCCATaGCTTCCACTGCCCAGGCGGAGTCGGGCCGACACT +
Preference number: 4 (lower is better)
Translates to: VSIIDTFLLSKP*LPLPRRSRADT
Trigger: AGTGTCGGCCCGACTCCGCCTGGGCAGTGGAAGCAATGGCTTACTCAGGAGGAAAGTGTCAATAATTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp ACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCCAGGACTCTGCGTGGCTaGTCTCGGGTAACTGTCACT +
Preference number: 4 (lower is better)
Translates to: TLWITFAMATATWSSITARTLRG*SRVTVT
Trigger: AGTGACAGTTACCCGAGATCAGCCACGCAGAGTCCT...GGCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR TCA 90 bp GAACACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGGGAGTGGCAGCTTaGGTAACATTCCTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: EHPPPQYNGDASDPCHSLQGVAA*VTFLSE
Trigger: TTCTGAAAGGAATGTTACTCAAGCTGCCACTCCCTG...AAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR GCA 90 bp ATCATTCACGTGGGCGGAATACAAACTGACATTCCTAACAGGACTTACCTAGCAAGCTGTCGCCGCCGCTaGCGCCTTCGCCGTCTTAAC +
Preference number: 4 (lower is better)
Translates to: IIHVGGIQTDIPNRTYLASCRRR*RLRRLN
Trigger: GTTAAGACGGCGAAGGCGGCAGCGGCGGCGACAGCT...TGCTAGGTAAGTCCTGTTAGGAATGTCAGTTTGTATTCCGCCCACGTGAATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp AAGGTGACCACAACACTCTTCGGAAGATGCTTGGATAATCAGAGTCCCTTGGGCGTGAGAGTTCCCTCCTaGTCTTCAGCAGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: KVTTTLFGRCLDNQSPLGVRVPS*SSAGSG
Trigger: GCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCAC...GCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp ACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCCTCCTCCACAGTACAATaGGGACGCCTCAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: TLWITFAMATATWSSITASSTVQ*GRLRPL
Trigger: CAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGA...GGCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR TCA 90 bp CCTGAGGTTTCCACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCAAACAGAGTGCTGTCTaGGCGCCGCCTCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PEVSTLKNSLDYLCYGDGKQSAV*APPLQE
Trigger: CTCCTGAAGAGGCGGCGCTCAGACAGCACTCTGTTT...GCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAAACCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR TCA 90 bp TTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCCTTCTGAGTTCAGGACTCTGCGTGGCTaGTCTCGGGTAACTGTCACT +
Preference number: 4 (lower is better)
Translates to: LPLLWRRPPGLLLQPSEFRTLRG*SRVTVT
Trigger: AGTGACAGTTACCCGAGATCAGCCACGCAGAGTCCT...GAACTCAGAAGGCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR TCA 90 bp CCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGCTTGAGTAGAACTGTGATAATTTaGAGTTACAGGACAGACAGA +
Preference number: 4 (lower is better)
Translates to: PPPVRVPSCSSAGSGSLSRTVII*SYRTDR
Trigger: TCTGTCTGTCCTGTAACTTCAAATTATCACAGTTCT...ACTCAAGCTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR TCA 90 bp GGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGCCTTCATGCACTTTTaGCAGCTCAGTACCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GDASDPCHSLQKSSLLQPAFMHF*QLSTCE
Trigger: CTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGC...AGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp AACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCTCGGTCGCTGATTTGTaGCGCGATTCAAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: NSLDYLCYGDGHLVFYYSSVADL*RDSRAH
Trigger: GTGGGCTCTTGAATCGCGTCACAAATCAGCGACCGA...GCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453532.5
CDS-3UTR GCA 90 bp CTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATGACGCCTCAGACCCTTaGCACTCTCTTCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: LLHSTMGTPQTLATLFRNDASDP*HSLQKS
Trigger: TGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTC...ATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR GCA 90 bp TTCCACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTGTGAGAGTTCCCTCCTaGTCTTCAGCAGGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: FHIKELSGLPLLWRRPPGVRVPS*SSAGSG
Trigger: GCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCAC...ACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CCA 90 bp CCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTATGGCGACGGCCACCTaGTCTTCTATTACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PQYNGDASDPCHSLQKSSMATAT*SSITAF
Trigger: GAAGGCTGTAATAGAAGACCAGGTGGCCGTCGCCAT...AGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR CCA 90 bp CCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTGGATTACCTTTGCTATaGCGACGGCCACCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PQYNGDASDPCHSLQKSSGLPLL*RRPPGL
Trigger: AAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCC...AGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR CCA 90 bp CCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAATTGAGGAATCTCGTGTaGTTTCATGCTGTGATGGGT +
Preference number: 4 (lower is better)
Translates to: PSSTVQWGRLRPLPLSSELRNLV*FHAVMG
Trigger: ACCCATCACAGCATGAAACCACACGAGATTCCTCAA...TTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CCA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCGCGTTTGTTCTTGTGTaGGTTGAACAGTCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPAFVLV*VEQSKA
Trigger: AGCTTTGGACTGTTCAACCCACACAAGAACAAACGC...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CCA 90 bp TACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTACCTGTGAGAACAGAAGGTCCCAGCACTCACTaGCACAATGCCAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: YSERPSCTFDSSVPVRTEGPSTH*HNARSP
Trigger: TGGGCTCCTGGCATTGTGCCAGTGAGTGCTGGGACC...TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp AAGGTGACCACAACACTCTTCGGAAGATGCTTGGATAATCAGAGTCCCTTGGGCGCTGTGCTCATTACCTaGTCCCAGCACTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: KVTTTLFGRCLDNQSPLGAVLIT*SQHSLA
Trigger: TGCCAGTGAGTGCTGGGACCAGGTAATGAGCACAGC...GCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCTCAGCATCATTCACGTaGGCGGAATACAAACTGACA +
Preference number: 4 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPSASFT*AEYKLT
Trigger: TGTCAGTTTGTATTCCGCCCACGTGAATGATGCTGA...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CCTGAGGTTTCCACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCAGGACTCTGCGTGGCTaGTCTCGGGTAACTGTCACT +
Preference number: 4 (lower is better)
Translates to: PEVSTLKNSLDYLCYGDGRTLRG*SRVTVT
Trigger: AGTGACAGTTACCCGAGATCAGCCACGCAGAGTCCT...GCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAAACCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR TCA 90 bp CACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGCAAACTGAGTTGTTTTaGCTCCGTGATTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: HPPPQYNGDASDPCHSLQQTELF*LRDFAL
Trigger: AAGAGCAAAATCACGGAGTCAAAACAACTCAGTTTG...CTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp GAGAGGTGTGGTACAACCTGCTCCCGCTTCAGTCATCACCCACCACATGGCCTCTTAACCCACAATGCATaGGGTATATGGAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: ERCGTTCSRFSHHPPHGLLTHNA*GIWKCL
Trigger: CAGACATTTCCATATACCTCATGCATTGTGGGTTAA...GAGGCCATGTGGTGGGTGATGACTGAAGCGGGAGCAGGTTGTACCACACCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCACACACTGATGCCTGGTaGAAGCCAGGCGTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: PKSGLEYSERPSCTFDSSHTDAW*KPGVWY
Trigger: ATACCAAACGCCTGGCTTTCACCAGGCATCAGTGTG...TGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp AAGGTGACCACAACACTCTTCGGAAGATGCTTGGATAATCAGAGTCCCTTGGGCCCTTACAAACAGGATTaGAAGCAGCCCTCTGCACCC +
Preference number: 4 (lower is better)
Translates to: KVTTTLFGRCLDNQSPLGPYKQD*KQPSAP
Trigger: GGGTGCAGAGGGCTGCTTGCAATCCTGTTTGTAAGG...GCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp TCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCCTTCCTTACAAACAGGATTaGAAGCAGCCCTCTGCACCC +
Preference number: 4 (lower is better)
Translates to: SLDYLCYGDGHLVFYYSLPYKQD*KQPSAP
Trigger: GGGTGCAGAGGGCTGCTTGCAATCCTGTTTGTAAGG...AAGGCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR GCA 90 bp TACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTACCTGTGAGAACAGAACAGCAGCCGGAGCACTaGAAATGGCAGGCGTGTAGA +
Preference number: 4 (lower is better)
Translates to: YSERPSCTFDSSVPVRTEQQPEH*KWQACR
Trigger: TCTACACGCCTGCCATTTGCAGTGCTCCGGCTGCTG...TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp GACTCGATCTTAACCATGGTACCAAACTCTCAAGTGAAGCACACTGATGCCTGGCACTCACTGGCACAATaGCAGGAGCCCAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: DSILTMVPNSQVKHTDAWHSLAQ*QEPRER
Trigger: CCTTTCTCTGGGCTCCTGGCATTGTGCCAGTGAGTG...CCAGGCATCAGTGTGCTTCACTTGAGAGTTTGGTACCATGGTTAAGATCGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp ACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCAGGCAGGACTCTGCGTaGCTGATCTCGGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: TLKNSLDYLCYGDGHLVFRQDSA*LISGNC
Trigger: ACAGTTACCCGAGATCAGCCACGCAGAGTCCTGCCT...GAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CCA 90 bp TTCCACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTTCCTCCACAGTACAATaGGGACGCCTCAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: FHIKELSGLPLLWRRPPGSSTVQ*GRLRPL
Trigger: CAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGA...ACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR CCA 90 bp AGTAAAACCAAAGGAAGGCAGGACTCTGCGTGGCTGATCTCGGGTAACTGTCACTCATCCTGTGGGCCATaGCCTAGGGCATTACTGATT +
Preference number: 4 (lower is better)
Translates to: SKTKGRQDSAWLISGNCHSSCGP*PRALLI
Trigger: AATCAGTAATGCCCTAGGCCATGGCCCACAGGATGA...GTGACAGTTACCCGAGATCAGCCACGCAGAGTCCTGCCTTCCTTTGGTTTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CCA 90 bp TCTGAGCAGGCACAGCCTTACAAACAGGATTGCAAGCAGCCCTCTGCACCCCAAATCTCACAGATCCTGTaGCCCTTTTGTCCCATAGAA +
Preference number: 4 (lower is better)
Translates to: SEQAQPYKQDCKQPSAPQISQIL*PFCPIE
Trigger: TTCTATGGGACAAAAGGGCCACAGGATCTGTGAGAT...TTGGGGTGCAGAGGGCTGCTTGCAATCCTGTTTGTAAGGCTGTGCCTGCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
3UTR CAA 72 bp ACACTCTTCGGAAGATGCTTGGATAATCAGAGTCCCTaGGGCACAGTTCCACTGTTCACGGCACTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: TLFGRCLDNQSP*GTVPLFTALCQ
Trigger: TTGGCACAGTGCCGTGAACAGTGGAACTGTGCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp ACACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCATTTCATTTTCAAATCTaGTTCCGACCATCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: TPSSTVQWGRLRPLPLSSFHFQI*FRPSSL
Trigger: CAGAGACGATGGTCGGAATCAGATTTGAAAATGAAA...TGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCCAATGTACCTTCCGATaGATAGGCACCAGAATAATT +
Preference number: 4 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPQCTFR*IGTRII
Trigger: AATTATTCTGGTGCCTATTCATCGGAAGGTACATTG...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR TCA 90 bp GAACACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTTCATCCTGTAAATACTaGAGGAGAATCTCACAGATC +
Preference number: 4 (lower is better)
Translates to: EHPPPQYNGDASDPCHSLSSCKY*RRISQI
Trigger: GATCTGTGAGATTCTCCTTCAGTATTTACAGGATGA...AAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp AAGGTGACCACAACACTCTTCGGAAGATGCTTGGATAATCAGAGTCCCTTGGGCCTCCCATTCAGCTGTTaGGGAATCTCGTGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: KVTTTLFGRCLDNQSPLGLPFSC*GISCGF
Trigger: GAAACCACACGAGATTCCTCAACAGCTGAATGGGAG...GCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp TCTGAGCAGGCACAGCCTTACAAACAGGATTGCAAGCAGCCCTCTGCACCCCAAATATGGAAATGTCTGTaGAAGAACCACCAGCAGCTA +
Preference number: 4 (lower is better)
Translates to: SEQAQPYKQDCKQPSAPQIWKCL*KNHQQL
Trigger: TAGCTGCTGGTGGTTCTTTCACAGACATTTCCATAT...TTGGGGTGCAGAGGGCTGCTTGCAATCCTGTTTGTAAGGCTGTGCCTGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR TCA 90 bp TCTGAGCAGGCACAGCCTTACAAACAGGATTGCAAGCAGCCCTCTGCACCCCAATACCTCTTGCTTTTATaGACCAGAACAAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SEQAQPYKQDCKQPSAPQYLLLL*TRTSLG
Trigger: TCCCAGACTTGTTCTGGTTCATAAAAGCAAGAGGTA...TTGGGGTGCAGAGGGCTGCTTGCAATCCTGTTTGTAAGGCTGTGCCTGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp CCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGACGCCTCAGACCCTTaGCACTCTCTTCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: PKSGLEYSERPSCTFDSSDASDP*HSLQKS
Trigger: TGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTC...TGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR GCA 90 bp GAGAGGTGTGGTACAACCTGCTCCCGCTTCAGTCATCACCCACCACATGGCCTCACTGAATACATGAAGTaGTGGATAGCCTTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: ERCGTTCSRFSHHPPHGLTEYMK*WIALLF
Trigger: AAAAAGCAAGGCTATCCAGCACTTCATGTATTCAGT...GAGGCCATGTGGTGGGTGATGACTGAAGCGGGAGCAGGTTGTACCACACCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp CCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGGTCCATCGTTTCACTaGTTGGTAACCCCCAGACTT +
Preference number: 4 (lower is better)
Translates to: PKSGLEYSERPSCTFDSSGPSFH*LVTPRL
Trigger: AAGTCTGGGGGTTACCAAGCAGTGAAACGATGGACC...TGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CCA 90 bp CACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGCTAATCTTGGTCTTTTaGCTGGTATTTCATCAGTGT +
Preference number: 4 (lower is better)
Translates to: HPPPQYNGDASDPCHSLQLILVF*LVFHQC
Trigger: ACACTGATGAAATACCAGCCAAAAGACCAAGATTAG...CTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR CCA 90 bp CCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGAGGTTTCCATGGCGACGGCCACCTaGTCTTCTATTACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PCHSLQKSSLLQPVPEVSMATAT*SSITAF
Trigger: GAAGGCTGTAATAGAAGACCAGGTGGCCGTCGCCAT...GGAAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CCA 90 bp TTCCACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTATGGCGACGGCCACCTaGTCTTCTATTACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FHIKELSGLPLLWRRPPGMATAT*SSITAF
Trigger: GAAGGCTGTAATAGAAGACCAGGTGGCCGTCGCCAT...ACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CCA 90 bp CCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGAGGTTTCCGGATTACCTTTGCTATaGCGACGGCCACCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PCHSLQKSSLLQPVPEVSGLPLL*RRPPGL
Trigger: AAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCC...GGAAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CCA 90 bp TTCCACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTGGATTACCTTTGCTATaGCGACGGCCACCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: FHIKELSGLPLLWRRPPGGLPLL*RRPPGL
Trigger: AAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCC...ACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CCA 90 bp CAAAGTAAAACCAAAGGAAGGCAGGACTCTGCGTGGCTGATCTCGGGTAACTGTAGGTCAGGCTCCAGTTaGTATCCCCTCCTACTTTCA +
Preference number: 4 (lower is better)
Translates to: QSKTKGRQDSAWLISGNCRSGSS*YPLLLS
Trigger: TGAAAGTAGGAGGGGATACCAACTGGAGCCTGACCT...ACAGTTACCCGAGATCAGCCACGCAGAGTCCTGCCTTCCTTTGGTTTTACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CCA 90 bp TACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACCTCCAGCTTCATGTTaGCAGTTACTGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: YNGDASDPCHSLQKSSLLPPASC*QLLLQL
Trigger: GAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGG...TAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CCA 90 bp AACCCTCCAGCTTCATGTTGGCAGTTACTGCTCCAGCTCCACTTCCTTCCGCCCATCCGCTATCAGACATaGTTTTCTGAAGTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: NPPASCWQLLLQLHFLPPIRYQT*FSEVVL
Trigger: AAGCACAACTTCAGAAAACCATGTCTGATAGCGGAT...GGGCGGAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp ATCATTCACGTGGGCGGAATACAAACTGACATTCCTAACAGGACTTACCTAGCACCCACACCCACACCTTaGTCCCCACATCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IIHVGGIQTDIPNRTYLAPTPTP*SPHQAA
Trigger: AGCTGCTTGATGTGGGGACCAAGGTGTGGGTGTGGG...TGCTAGGTAAGTCCTGTTAGGAATGTCAGTTTGTATTCCGCCCACGTGAATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp TTCCTCTTTTTGAACACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTTCTCTTTCCTCTTTTTaGACACCCTCCTCCACAGTA +
Preference number: 4 (lower is better)
Translates to: FLFLNTLLHSTMGTPQTLSLSSF*TPSSTV
Trigger: TACTGTGGAGGAGGGTGTTCAAAAAGAGGAAAGAGA...AAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTGTTCAAAAAGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR TCA 90 bp CAAAGTAAAACCAAAGGAAGGCAGGACTCTGCGTGGCTGATCTCGGGTAACTGTGGCCTAGGGCATTACTaGTTTCCTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: QSKTKGRQDSAWLISGNCGLGHY*FPFPCP
Trigger: AGGACATGGAAAAGGAAATCAGTAATGCCCTAGGCC...ACAGTTACCCGAGATCAGCCACGCAGAGTCCTGCCTTCCTTTGGTTTTACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp CCTGAGGTTTCCACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCTCCCATTCAGCTGTTaGGGAATCTCGTGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PEVSTLKNSLDYLCYGDGLPFSC*GISCGF
Trigger: GAAACCACACGAGATTCCTCAACAGCTGAATGGGAG...GCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAAACCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp CTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATATATGGAAATGTCTGTaGAAGAACCACCAGCAGCTA +
Preference number: 4 (lower is better)
Translates to: LLHSTMGTPQTLATLFRNIWKCL*KNHQQL
Trigger: TAGCTGCTGGTGGTTCTTTCACAGACATTTCCATAT...ATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR GCA 90 bp TGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGAGATTTATTACCCAGAGCTGTCGCCGCCGCTaGCGCCTTCGCCGTCTTAAC +
Preference number: 4 (lower is better)
Translates to: CHSDLWIVTYSIRRFITQSCRRR*RLRRLN
Trigger: GTTAAGACGGCGAAGGCGGCAGCGGCGGCGACAGCT...CTGGGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439684.5
ENST00000453532.5
ENST00000458551.1
CDS-3UTR GCA 90 bp TGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGAGGTTTCCACATCTCTGGATTACCTTTaGTATGGCGACGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: CHSLQKSSLLQPVPEVSTSLDYL*YGDGHL
Trigger: CAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGA...TGTGGAAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR GCA 90 bp CTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGAGGTTTCCATCTCTGGATTACCTTTaGTATGGCGACGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: LATLFRNHLCYSLFLRFPSLDYL*YGDGHL
Trigger: CAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGA...TGGAAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR GCA 90 bp TTCCACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTGACGCCTCAGACCCTTaGCACTCTCTTCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: FHIKELSGLPLLWRRPPGDASDP*HSLQKS
Trigger: TGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTC...ACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR GCA 90 bp AACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCTCTCGTGTGGTTTCATaGTGTGATGGGTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: NSLDYLCYGDGHLVFYYSSRVVS*CDGSTL
Trigger: TAGAGTGGACCCATCACAGCATGAAACCACACGAGA...GCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR GCA 90 bp TGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCGCAGTAAATGACCACTaGCCATTATGTTTGCAAACG +
Preference number: 4 (lower is better)
Translates to: WGRLRPLPLSSEIISVTAAVNDH*PLCLQT
Trigger: CGTTTGCAAACATAATGGGCAGTGGTCATTTACTGC...GGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR GCA 90 bp TACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTACCTGTGAGAACAGAAAGGTGTGGTACAACCTaGTCCCGCTTCAGTCATCAC +
Preference number: 4 (lower is better)
Translates to: YSERPSCTFDSSVPVRTERCGTT*SRFSHH
Trigger: GTGATGACTGAAGCGGGAGCAGGTTGTACCACACCT...TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp CCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAACTAATCTTGGTCTTTTaGCTGGTATTTCATCAGTGT +
Preference number: 4 (lower is better)
Translates to: PSSTVQWGRLRPLPLSSELILVF*LVFHQC
Trigger: ACACTGATGAAATACCAGCCAAAAGACCAAGATTAG...TTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR CCA 90 bp AACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCAAGCAGAAGTTACCATaGGCTTTGTGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: NSLDYLCYGDGHLVFYYSKQKLP*ALWSAG
Trigger: TCCAGCTGACCACAAAGCCCATGGTAACTTCTGCTT...GCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR CCA 90 bp CTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATAGAGATTTACCCCTTTaGTCCATCGTTTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: LLHSTMGTPQTLATLFRNRDLPL*SIVSLL
Trigger: AAGCAGTGAAACGATGGACCAAAGGGGTAAATCTCT...ATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR CAA 72 bp CTCTTTAAGGTGACCACAACACTCTTCGGAAGATGCTaGGATAATCAGAGTCCCTTGGGCACAGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LFKVTTTLFGRC*DNQSPLGTVPL
Trigger: CAGTGGAACTGTGCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCACCTTAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp AACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCTGTGGTTTCATGCTGTaGTGGGTCCACTCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: NSLDYLCYGDGHLVFYYSCGFML*WVHSKR
Trigger: TCTTTTAGAGTGGACCCATCACAGCATGAAACCACA...GCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp GACTCGATCTTAACCATGGTACCAAACTCTCAAGTGAAGCACACTGATGCCTGGCAGGGAGTGGCAGCTTaGGTAACATTCCTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: DSILTMVPNSQVKHTDAWQGVAA*VTFLSE
Trigger: TTCTGAAAGGAATGTTACTCAAGCTGCCACTCCCTG...CCAGGCATCAGTGTGCTTCACTTGAGAGTTTGGTACCATGGTTAAGATCGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CAGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAAGGCGGGTGGATCACCTaGGGTCAGCAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: QGLFNPQCMRYMEMSVKEGGWIT*GQQFKT
Trigger: GGTCTTGAACTGCTGACCTCAGGTGATCCACCCGCC...TTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CTGATCTCGGGTAACTGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGATCCAGAACCTCTCCTaGAGGGGCCACATTCCGTGT +
Preference number: 4 (lower is better)
Translates to: LISGNCHSDLWIVTYSIRIQNLS*RGHIPC
Trigger: ACACGGAATGTGGCCCCTTCAGGAGAGGTTCTGGAT...CCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTTACCCGAGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453532.5
CDS-3UTR GCA 90 bp ATCATTCACGTGGGCGGAATACAAACTGACATTCCTAACAGGACTTACCTAGCATGGCCTTTTTGGCTGTaGTCATTACCTGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: IIHVGGIQTDIPNRTYLAWPFWL*SLPGPS
Trigger: GCTGGGACCAGGTAATGAGCACAGCCAAAAAGGCCA...TGCTAGGTAAGTCCTGTTAGGAATGTCAGTTTGTATTCCGCCCACGTGAATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp CCTCAAAATAATACATTAAGCTCAGCATCATTCACGTGGGCGGAATACAAACTGCTGGGAGGCGGAGGTTaGAGTGAGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: PQNNTLSSASFTWAEYKLLGGGG*SELRSH
Trigger: GTGTGATCTCAGCTCACTGCAACCTCCGCCTCCCAG...CAGTTTGTATTCCGCCCACGTGAATGATGCTGAGCTTAATGTATTATTTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp ACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCCGGAATCCAAATAAGCTaGCAGCATTGTAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: TLWITFAMATATWSSITAGIQIS*QHCRDC
Trigger: ACAGTCTCTACAATGCTGCCAGCTTATTTGGATTCC...GGCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR CCA 90 bp GTTCAAAGTAAAACCAAAGGAAGGCAGGACTCTGCGTGGCTGATCTCGGGTAACGGCTTTGTGGTCAGCTaGAATGGGAATCCAAATAAG +
Preference number: 4 (lower is better)
Translates to: VQSKTKGRQDSAWLISGNGFVVS*NGNPNK
Trigger: CTTATTTGGATTCCCATTCCAGCTGACCACAAAGCC...GTTACCCGAGATCAGCCACGCAGAGTCCTGCCTTCCTTTGGTTTTACTTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR CCA 90 bp ACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCAAGCAGAAGTTACCATaGGCTTTGTGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TLKNSLDYLCYGDGHLVFKQKLP*ALWSAG
Trigger: TCCAGCTGACCACAAAGCCCATGGTAACTTCTGCTT...GAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR CCA 90 bp TACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTACCTGTGAGAACAGAAAGGTCAGGCTCCAGTTaGTATCCCCTCCTACTTTCA +
Preference number: 4 (lower is better)
Translates to: YSERPSCTFDSSVPVRTERSGSS*YPLLLS
Trigger: TGAAAGTAGGAGGGGATACCAACTGGAGCCTGACCT...TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CCA 90 bp CCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAGAATACATGAAGTGCTaGATAGCCTTGCTTTTTATT +
Preference number: 4 (lower is better)
Translates to: PSSTVQWGRLRPLPLSSEEYMKC*IALLFI
Trigger: AATAAAAAGCAAGGCTATCCAGCACTTCATGTATTC...TTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CCA 90 bp TACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTACCTGTGAGAACAGAAGTGCCTAGAGAAGTATaGCCTGTGGTCTCCCACATT +
Preference number: 4 (lower is better)
Translates to: YSERPSCTFDSSVPVRTEVPREV*PVVSHI
Trigger: AATGTGGGAGACCACAGGCCATACTTCTCTAGGCAC...TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp TCGGGTAACTGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGAGATTTAAACAGAGTGCTGTCTaGGCGCCGCCTCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SGNCHSDLWIVTYSIRRFKQSAV*APPLQE
Trigger: CTCCTGAAGAGGCGGCGCTCAGACAGCACTCTGTTT...AAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTTACCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439684.5
ENST00000453532.5
ENST00000458551.1
CDS-3UTR TCA 90 bp CACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTTCTCTTTCCTCTTTTTaGACACCCTCCTCCACAGTA +
Preference number: 4 (lower is better)
Translates to: HIKELSGLPLLWRRPPGLSLSSF*TPSSTV
Trigger: TACTGTGGAGGAGGGTGTTCAAAAAGAGGAAAGAGA...AAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR TCA 90 bp ACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCAGACAGAGTTTCCATaGCCACTTTCTTTAAGTCGT +
Preference number: 4 (lower is better)
Translates to: TPQTLATLFRNHLCYSLFQTEFP*PLSLSR
Trigger: ACGACTTAAAGAAAGTGGTCATGGAAACTCTGTCTG...GAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp AGTAAAACCAAAGGAAGGCAGGACTCTGCGTGGCTGATCTCGGGTAACTGTCACCAATGTACCTTCCGATaGATAGGCACCAGAATAATT +
Preference number: 4 (lower is better)
Translates to: SKTKGRQDSAWLISGNCHQCTFR*IGTRII
Trigger: AATTATTCTGGTGCCTATTCATCGGAAGGTACATTG...GTGACAGTTACCCGAGATCAGCCACGCAGAGTCCTGCCTTCCTTTGGTTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp TTATGTCCTGCAAGTTTTAAGAGCCGTCCGGAAGAGTGTAGGTTAATGGAAAGCGCCTTCATGCACTTTTaGCAGCTCAGTACCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LCPASFKSRPEECRLMESAFMHF*QLSTCE
Trigger: CTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGC...GCTTTCCATTAACCTACACTCTTCCGGACGGCTCTTAAAACTTGCAGGACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp GTTCAAAGTAAAACCAAAGGAAGGCAGGACTCTGCGTGGCTGATCTCGGGTAACTTCTGTCCCTCTCTTTaGCTGAGCAATTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: VQSKTKGRQDSAWLISGNFCPSL*LSNSFP
Trigger: AGGAAAAGAATTGCTCAGGCAAAGAGAGGGACAGAA...GTTACCCGAGATCAGCCACGCAGAGTCCTGCCTTCCTTTGGTTTTACTTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR GCA 90 bp CCTGAGGTTTCCACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCAGTGAGAGGCCTTCATaGACTTTTGACAGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: PEVSTLKNSLDYLCYGDGSERPS*TFDSSV
Trigger: TACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACT...GCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAAACCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR GCA 90 bp TGGCAACCTCAGAGCCAAGTACTAAATTTTCTTCCACAAATTTCAGTGGGGATGCTGTTCACGGCACTGTaGCAACGCTGTAGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: WQPQSQVLNFLPQISVGMLFTAL*QRCSVR
Trigger: TCTGACACTACAGCGTTGGCACAGTGCCGTGAACAG...CATCCCCACTGAAATTTGTGGAAGAAAATTTAGTACTTGGCTCTGAGGTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp CCATGGGCTTTGTGGTCAGCTGGAATGGGAATCCAAATAAGCTGGCAGCATTGTGGAATCCAAATAAGCTaGCAGCATTGTAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: PWALWSAGMGIQISWQHCGIQIS*QHCRDC
Trigger: ACAGTCTCTACAATGCTGCCAGCTTATTTGGATTCC...ACAATGCTGCCAGCTTATTTGGATTCCCATTCCAGCTGACCACAAAGCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458551.1
CDS-3UTR CCA 90 bp TTATGTCCTGCAAGTTTTAAGAGCCGTCCGGAAGAGTGTAGGTTAATGGAAAGCTCATCCTGTGGGCCATaGCCTAGGGCATTACTGATT +
Preference number: 4 (lower is better)
Translates to: LCPASFKSRPEECRLMESSSCGP*PRALLI
Trigger: AATCAGTAATGCCCTAGGCCATGGCCCACAGGATGA...GCTTTCCATTAACCTACACTCTTCCGGACGGCTCTTAAAACTTGCAGGACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp TACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTAATCTCACAGATCCTGTaGCCCTTTTGTCCCATAGAA +
Preference number: 4 (lower is better)
Translates to: YNGDASDPCHSLQKSSLLISQIL*PFCPIE
Trigger: TTCTATGGGACAAAAGGGCCACAGGATCTGTGAGAT...TAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413407.5
3UTR CAA 72 bp TCCGTGTTCCATTACAAGCAGAAGTTACCATGGGCTTaGTGGTCAGCTGGAATGGGAATCCAAATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVFHYKQKLPWA*WSAGMGIQISW
Trigger: CCAGCTTATTTGGATTCCCATTCCAGCTGACCACAAAGCCCATGGTAACTTCTGCTTGTAATGGAACACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458551.1
CDS-3UTR TCA 90 bp ATCATTCACGTGGGCGGAATACAAACTGACATTCCTAACAGGACTTACCTAGCAGGCCTAGGGCATTACTaGTTTCCTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: IIHVGGIQTDIPNRTYLAGLGHY*FPFPCP
Trigger: AGGACATGGAAAAGGAAATCAGTAATGCCCTAGGCC...TGCTAGGTAAGTCCTGTTAGGAATGTCAGTTTGTATTCCGCCCACGTGAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp AAGGTGACCACAACACTCTTCGGAAGATGCTTGGATAATCAGAGTCCCTTGGGCTCATCCTGTAAATACTaGAGGAGAATCTCACAGATC +
Preference number: 4 (lower is better)
Translates to: KVTTTLFGRCLDNQSPLGSSCKY*RRISQI
Trigger: GATCTGTGAGATTCTCCTTCAGTATTTACAGGATGA...GCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp ACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCTTAACCCACAATGCATaGGGTATATGGAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: TPQTLATLFRNHLCYSLFLTHNA*GIWKCL
Trigger: CAGACATTTCCATATACCTCATGCATTGTGGGTTAA...GAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp GTTCAAAGTAAAACCAAAGGAAGGCAGGACTCTGCGTGGCTGATCTCGGGTAACTTGCAAACGAGTGAGTaGATGAATACGCTGAACAAA +
Preference number: 4 (lower is better)
Translates to: VQSKTKGRQDSAWLISGNLQTSE*MNTLNK
Trigger: TTTGTTCAGCGTATTCATTCACTCACTCGTTTGCAA...GTTACCCGAGATCAGCCACGCAGAGTCCTGCCTTCCTTTGGTTTTACTTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp CCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTTCAAGGTCAAGTTTaGGAAAGATACGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PKSGLEYSERPSCTFDSSVQGQV*ERYVFS
Trigger: TGAGAACACGTATCTTTCTCAAACTTGACCTTGAAC...TGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp GACTCGATCTTAACCATGGTACCAAACTCTCAAGTGAAGCACACTGATGCCTGGGCAGTAAATGACCACTaGCCATTATGTTTGCAAACG +
Preference number: 4 (lower is better)
Translates to: DSILTMVPNSQVKHTDAWAVNDH*PLCLQT
Trigger: CGTTTGCAAACATAATGGGCAGTGGTCATTTACTGC...CCAGGCATCAGTGTGCTTCACTTGAGAGTTTGGTACCATGGTTAAGATCGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp TACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTATCTTGGTCTTTTGGCTaGTATTTCATCAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: YNGDASDPCHSLQKSSLLSWSFG*YFISVH
Trigger: GTGGACACTGATGAAATACCAGCCAAAAGACCAAGA...TAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CCA 90 bp TCTGCGTGGCTGATCTCGGGTAACTGTCACTCTGATCTTTGGATAGTCACTTATGGCTTTGTGGTCAGCTaGAATGGGAATCCAAATAAG +
Preference number: 4 (lower is better)
Translates to: SAWLISGNCHSDLWIVTYGFVVS*NGNPNK
Trigger: CTTATTTGGATTCCCATTCCAGCTGACCACAAAGCC...ATAAGTGACTATCCAAAGATCAGAGTGACAGTTACCCGAGATCAGCCACGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453532.5
CDS-3UTR CCA 90 bp TACCCAGTTTCAGCATGTTGTTCCAGGATCCAGAACCTGTCAGTTCACAAGATGGGCTTTGTGGTCAGCTaGAATGGGAATCCAAATAAG +
Preference number: 4 (lower is better)
Translates to: YPVSACCSRIQNLSVHKMGFVVS*NGNPNK
Trigger: CTTATTTGGATTCCCATTCCAGCTGACCACAAAGCC...CATCTTGTGAACTGACAGGTTCTGGATCCTGGAACAACATGCTGAAACTGGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458551.1
CDS-3UTR CCA 90 bp ATCATTCACGTGGGCGGAATACAAACTGACATTCCTAACAGGACTTACCTAGCAAAGCAGAAGTTACCATaGGCTTTGTGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: IIHVGGIQTDIPNRTYLAKQKLP*ALWSAG
Trigger: TCCAGCTGACCACAAAGCCCATGGTAACTTCTGCTT...TGCTAGGTAAGTCCTGTTAGGAATGTCAGTTTGTATTCCGCCCACGTGAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp TTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAACCACCAGCAGGATTACCTTTGCTATaGCGACGGCCACCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: FNPQCMRYMEMSVKEPPAGLPLL*RRPPGL
Trigger: AAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCC...TGCTGGTGGTTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CCA 90 bp TACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTACCTGTGAGAACAGAAATAATCAGAGTCCCTTaGGCACAGTTCCACTGTTCA +
Preference number: 4 (lower is better)
Translates to: YSERPSCTFDSSVPVRTEIIRVP*AQFHCS
Trigger: TGAACAGTGGAACTGTGCCCAAGGGACTCTGATTAT...TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp ATCATTCACGTGGGCGGAATACAAACTGACATTCCTAACAGGACTTACCTAGCAAACCTCTGGCCTTTTTaGCTGTGCTCATTACCTGGT +
Preference number: 4 (lower is better)
Translates to: IIHVGGIQTDIPNRTYLANLWPF*LCSLPG
Trigger: ACCAGGTAATGAGCACAGCCAAAAAGGCCAGAGGTT...TGCTAGGTAAGTCCTGTTAGGAATGTCAGTTTGTATTCCGCCCACGTGAATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp TGGCAACCTCAGAGCCAAGTACTAAATTTTCTTCCACAAATTTCAGTGGGGATGGACCTAGTGAACCTCTaGCCTTTTTGGCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: WQPQSQVLNFLPQISVGMDLVNL*PFWLCS
Trigger: TGAGCACAGCCAAAAAGGCCAGAGGTTCACTAGGTC...CATCCCCACTGAAATTTGTGGAAGAAAATTTAGTACTTGGCTCTGAGGTTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp TACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTACCTGTGAGAACAGAAGAGAAGTATGGCCTGTaGTCTCCCACATTCAATTCA +
Preference number: 4 (lower is better)
Translates to: YSERPSCTFDSSVPVRTEEKYGL*SPTFNS
Trigger: TGAATTGAATGTGGGAGACCACAGGCCATACTTCTC...TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp CCTCAAAATAATACATTAAGCTCAGCATCATTCACGTGGGCGGAATACAAACTGCATTGTACTCCAGCCTaGGCGACAAGAGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: PQNNTLSSASFTWAEYKLHCTPA*ATRDSV
Trigger: GACAGAGTCTCTTGTCGCCCAGGCTGGAGTACAATG...CAGTTTGTATTCCGCCCACGTGAATGATGCTGAGCTTAATGTATTATTTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp GACTCGATCTTAACCATGGTACCAAACTCTCAAGTGAAGCACACTGATGCCTGGCAAACTGAGTTGTTTTaGCTCCGTGATTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: DSILTMVPNSQVKHTDAWQTELF*LRDFAL
Trigger: AAGAGCAAAATCACGGAGTCAAAACAACTCAGTTTG...CCAGGCATCAGTGTGCTTCACTTGAGAGTTTGGTACCATGGTTAAGATCGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp GACTCGATCTTAACCATGGTACCAAACTCTCAAGTGAAGCACACTGATGCCTGGTTGCAAACGAGTGAGTaGATGAATACGCTGAACAAA +
Preference number: 4 (lower is better)
Translates to: DSILTMVPNSQVKHTDAWLQTSE*MNTLNK
Trigger: TTTGTTCAGCGTATTCATTCACTCACTCGTTTGCAA...CCAGGCATCAGTGTGCTTCACTTGAGAGTTTGGTACCATGGTTAAGATCGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGAGGTTTCCATGTTTGCAAACGAGTaGGTGAATGAATACGCTGAA +
Preference number: 4 (lower is better)
Translates to: PCHSLQKSSLLQPVPEVSMFANE*VNEYAE
Trigger: TTCAGCGTATTCATTCACTCACTCGTTTGCAAACAT...GGAAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp AAGGTGACCACAACACTCTTCGGAAGATGCTTGGATAATCAGAGTCCCTTGGGCTTGCAAAATATGTTCTaGCCAACTCTAAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: KVTTTLFGRCLDNQSPLGLQNMF*PTLNCL
Trigger: CAGACAGTTTAGAGTTGGTCAGAACATATTTTGCAA...GCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CAGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAATCAAGTGAAGCACACTaGTGCCTGGTGAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QGLFNPQCMRYMEMSVKESSEAH*CLVKAR
Trigger: CCTGGCTTTCACCAGGCATCAGTGTGCTTCACTTGA...TTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp GACTCTGCGTGGCTGATCTCGGGTAACTGTCACTCTGATCTTTGGATAGTCACTTGTCAGTTCACAAGATaGAGAGTTCGAAAATACCTA +
Preference number: 4 (lower is better)
Translates to: DSAWLISGNCHSDLWIVTCQFTR*RVRKYL
Trigger: TAGGTATTTTCGAACTCTTCATCTTGTGAACTGACA...AGTGACTATCCAAAGATCAGAGTGACAGTTACCCGAGATCAGCCACGCAGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439684.5
CDS-3UTR TCA 90 bp TCGGGTAACTGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGAGATTTCCAGAGTTCGGTCGCTaGTTTGTGACGCGATTCAAG +
Preference number: 4 (lower is better)
Translates to: SGNCHSDLWIVTYSIRRFPEFGR*FVTRFK
Trigger: CTTGAATCGCGTCACAAATCAGCGACCGAACTCTGG...AAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTTACCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453532.5
CDS-3UTR GCA 90 bp AACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCACTGAATACATGAAGTaGTGGATAGCCTTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: NSLDYLCYGDGHLVFYYSTEYMK*WIALLF
Trigger: AAAAAGCAAGGCTATCCAGCACTTCATGTATTCAGT...GCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CCA 90 bp TGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGAGGTTTCCACATCTTGGTCTTTTGGCTaGTATTTCATCAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: CHSLQKSSLLQPVPEVSTSWSFG*YFISVH
Trigger: GTGGACACTGATGAAATACCAGCCAAAAGACCAAGA...TGTGGAAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CCA 90 bp AAGAGTTCGAAAATACCTCTCCTGAAGGGGCCACATTCCGTGTTCCATTACAAGTCTTGGTCTTTTGGCTaGTATTTCATCAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KSSKIPLLKGPHSVFHYKSWSFG*YFISVH
Trigger: GTGGACACTGATGAAATACCAGCCAAAAGACCAAGA...CTTGTAATGGAACACGGAATGTGGCCCCTTCAGGAGAGGTATTTTCGAACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458551.1
CDS-3UTR CCA 90 bp TACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTACCTGTGAGAACAGAAGGAATCCAAATAAGCTaGCAGCATTGTAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: YSERPSCTFDSSVPVRTEGIQIS*QHCRDC
Trigger: ACAGTCTCTACAATGCTGCCAGCTTATTTGGATTCC...TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CCA 90 bp CAGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAAATGGCGACGGCCACCTaGTCTTCTATTACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: QGLFNPQCMRYMEMSVKEMATAT*SSITAF
Trigger: GAAGGCTGTAATAGAAGACCAGGTGGCCGTCGCCAT...TTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CCA 90 bp ATCATTCACGTGGGCGGAATACAAACTGACATTCCTAACAGGACTTACCTAGCAGCGTTTGTTCTTGTGTaGGTTGAACAGTCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: IIHVGGIQTDIPNRTYLAAFVLV*VEQSKA
Trigger: AGCTTTGGACTGTTCAACCCACACAAGAACAAACGC...TGCTAGGTAAGTCCTGTTAGGAATGTCAGTTTGTATTCCGCCCACGTGAATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp ATCATTCACGTGGGCGGAATACAAACTGACATTCCTAACAGGACTTACCTAGCATCAGTGGGGATGGAGTaGGGAGATGTTAGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: IIHVGGIQTDIPNRTYLASVGME*GDVSLN
Trigger: ATTAAGACTAACATCTCCCCACTCCATCCCCACTGA...TGCTAGGTAAGTCCTGTTAGGAATGTCAGTTTGTATTCCGCCCACGTGAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp TTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAACCACCAGCACCGGAGCACTGCAAATaGCAGGCGTGTAGATTCATA +
Preference number: 4 (lower is better)
Translates to: FNPQCMRYMEMSVKEPPAPEHCK*QACRFI
Trigger: TATGAATCTACACGCCTGCCATTTGCAGTGCTCCGG...TGCTGGTGGTTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp TTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAACCACCAGCATACCAAACTCTCAAGTaGAGCACACTGATGCCTGGT +
Preference number: 4 (lower is better)
Translates to: FNPQCMRYMEMSVKEPPAYQTLK*STLMPG
Trigger: ACCAGGCATCAGTGTGCTTCACTTGAGAGTTTGGTA...TGCTGGTGGTTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CAGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAAGAGGTTGCAGTGAGCTaGGATCACACCATTGTACTC +
Preference number: 4 (lower is better)
Translates to: QGLFNPQCMRYMEMSVKEEVAVS*DHTIVL
Trigger: GAGTACAATGGTGTGATCTCAGCTCACTGCAACCTC...TTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp TTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAACCACCAGCATCTCGTGTGGTTTCATaGTGTGATGGGTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: FNPQCMRYMEMSVKEPPASRVVS*CDGSTL
Trigger: TAGAGTGGACCCATCACAGCATGAAACCACACGAGA...TGCTGGTGGTTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR GCA 90 bp TGGCAACCTCAGAGCCAAGTACTAAATTTTCTTCCACAAATTTCAGTGGGGATGACACTCTTCGGAAGATaGTTGGATAATCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: WQPQSQVLNFLPQISVGMTLFGR*LDNQSP
Trigger: GGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGT...CATCCCCACTGAAATTTGTGGAAGAAAATTTAGTACTTGGCTCTGAGGTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp ATCATTCACGTGGGCGGAATACAAACTGACATTCCTAACAGGACTTACCTAGCAAGAATAATGGCTCACTaGATCTTTTCTCAACCCCCT +
Preference number: 4 (lower is better)
Translates to: IIHVGGIQTDIPNRTYLARIMAH*IFSQPP
Trigger: AGGGGGTTGAGAAAAGATGCAGTGAGCCATTATTCT...TGCTAGGTAAGTCCTGTTAGGAATGTCAGTTTGTATTCCGCCCACGTGAATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp GAGGTTTCCACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTAATCTTGGTCTTTTaGCTGGTATTTCATCAGTGT +
Preference number: 4 (lower is better)
Translates to: EVSTLKNSLDYLCYGDGHLILVF*LVFHQC
Trigger: ACACTGATGAAATACCAGCCAAAAGACCAAGATTAG...GTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CCA 90 bp TCGAAAATACCTCTCCTGAAGGGGCCACATTCCGTGTTCCATTACAAGCAGAAGCTAATCTTGGTCTTTTaGCTGGTATTTCATCAGTGT +
Preference number: 4 (lower is better)
Translates to: SKIPLLKGPHSVFHYKQKLILVF*LVFHQC
Trigger: ACACTGATGAAATACCAGCCAAAAGACCAAGATTAG...CTTCTGCTTGTAATGGAACACGGAATGTGGCCCCTTCAGGAGAGGTATTTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458551.1
CDS-3UTR CCA 90 bp AACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCTGTCACTCTGATCTTTaGATAGTCACTTATTCCATT +
Preference number: 4 (lower is better)
Translates to: NSLDYLCYGDGHLVFYYSCHSDL*IVTYSI
Trigger: AATGGAATAAGTGACTATCCAAAGATCAGAGTGACA...GCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CCA 90 bp TACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACAGCCTTCTGAGTTCATGTCACTCTGATCTTTaGATAGTCACTTATTCCATT +
Preference number: 4 (lower is better)
Translates to: YLCYGDGHLVFYYSLLSSCHSDL*IVTYSI
Trigger: AATGGAATAAGTGACTATCCAAAGATCAGAGTGACA...TGAACTCAGAAGGCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CCA 90 bp CCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGTGTCACTCTGATCTTTaGATAGTCACTTATTCCATT +
Preference number: 4 (lower is better)
Translates to: PQTLATLFRNHLCYSLFLCHSDL*IVTYSI
Trigger: AATGGAATAAGTGACTATCCAAAGATCAGAGTGACA...CAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CCA 90 bp AACTGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGAGATTTATTACCAGGCAGGACTCTGCGTaGCTGATCTCGGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: NCHSDLWIVTYSIRRFITRQDSA*LISGNC
Trigger: ACAGTTACCCGAGATCAGCCACGCAGAGTCCTGCCT...GGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CCA 90 bp AAGGTGACCACAACACTCTTCGGAAGATGCTTGGATAATCAGAGTCCCTTGGGCGAATACATGAAGTGCTaGATAGCCTTGCTTTTTATT +
Preference number: 4 (lower is better)
Translates to: KVTTTLFGRCLDNQSPLGEYMKC*IALLFI
Trigger: AATAAAAAGCAAGGCTATCCAGCACTTCATGTATTC...GCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp AACTGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGAGATTTATTACCCGAAAATACCTCTCCTaGAGGGGCCACATTCCGTGT +
Preference number: 4 (lower is better)
Translates to: NCHSDLWIVTYSIRRFITRKYLS*RGHIPC
Trigger: ACACGGAATGTGGCCCCTTCAGGAGAGGTATTTTCG...GGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458551.1
CDS-3UTR TCA 90 bp TGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGAGGTTTCCACAAGAACTGTGATAATTTaGAGTTACAGGACAGACAGA +
Preference number: 4 (lower is better)
Translates to: CHSLQKSSLLQPVPEVSTRTVII*SYRTDR
Trigger: TCTGTCTGTCCTGTAACTTCAAATTATCACAGTTCT...TGTGGAAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp TTATGTCCTGCAAGTTTTAAGAGCCGTCCGGAAGAGTGTAGGTTAATGGAAAGCTTTCATTTTCAAATCTaGTTCCGACCATCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LCPASFKSRPEECRLMESFHFQI*FRPSSL
Trigger: CAGAGACGATGGTCGGAATCAGATTTGAAAATGAAA...GCTTTCCATTAACCTACACTCTTCCGGACGGCTCTTAAAACTTGCAGGACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp CCTGAGGTTTCCACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCTTTTTAACCCACAATaGATGAGGTATATGGAAATG +
Preference number: 4 (lower is better)
Translates to: PEVSTLKNSLDYLCYGDGLFNPQ*MRYMEM
Trigger: CATTTCCATATACCTCATGCATTGTGGGTTAAAAAG...GCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAAACCTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CCA 90 bp TGGCAACCTCAGAGCCAAGTACTAAATTTTCTTCCACAAATTTCAGTGGGGATGAGAGATTTACCCCTTTaGTCCATCGTTTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: WQPQSQVLNFLPQISVGMRDLPL*SIVSLL
Trigger: AAGCAGTGAAACGATGGACCAAAGGGGTAAATCTCT...CATCCCCACTGAAATTTGTGGAAGAAAATTTAGTACTTGGCTCTGAGGTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp CCTCAAAATAATACATTAAGCTCAGCATCATTCACGTGGGCGGAATACAAACTGTCTTCGGAAGATGCTTaGATAATCAGAGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PQNNTLSSASFTWAEYKLSSEDA*IIRVPW
Trigger: CCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGA...CAGTTTGTATTCCGCCCACGTGAATGATGCTGAGCTTAATGTATTATTTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CCTTGTTTCAACAAGTCTATATTGTTTTGGAACAAACTGAGTTGTTTTGACTCCAACAGTCCAAAGCTCTaGGCAGGCACAGCCTTACAA +
Preference number: 4 (lower is better)
Translates to: PCFNKSILFWNKLSCFDSNSPKL*AGTALQ
Trigger: TTGTAAGGCTGTGCCTGCTCAGAGCTTTGGACTGTT...GGAGTCAAAACAACTCAGTTTGTTCCAAAACAATATAGACTTGTTGAAACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR GCA 90 bp GGTAACTGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGAGATTTATTGACGCCTCAGACCCTTaGCACTCTCTTCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: GNCHSDLWIVTYSIRRFIDASDP*HSLQKS
Trigger: TGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTC...AATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439684.5
ENST00000453532.5
CDS-3UTR GCA 90 bp CCTCAAAATAATACATTAAGCTCAGCATCATTCACGTGGGCGGAATACAAACTGTTCTGTCCCTCTCTTTaGCTGAGCAATTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PQNNTLSSASFTWAEYKLFCPSL*LSNSFP
Trigger: AGGAAAAGAATTGCTCAGGCAAAGAGAGGGACAGAA...CAGTTTGTATTCCGCCCACGTGAATGATGCTGAGCTTAATGTATTATTTTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp CCTTGTTTCAACAAGTCTATATTGTTTTGGAACAAACTGAGTTGTTTTGACTCCCATGTTGGCAGTTACTaGTCCAGCTCCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PCFNKSILFWNKLSCFDSHVGSY*SSSTSF
Trigger: GAAGGAAGTGGAGCTGGAGCAGTAACTGCCAACATG...GGAGTCAAAACAACTCAGTTTGTTCCAAAACAATATAGACTTGTTGAAACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR GCA 90 bp TTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAACCACCAGCATCAAGCAGAAGGCCATaGTATAGACTTCAACACTCT +
Preference number: 4 (lower is better)
Translates to: FNPQCMRYMEMSVKEPPASSRRP*YRLQHS
Trigger: AGAGTGTTGAAGTCTATAGCATGGCCTTCTGCTTGA...TGCTGGTGGTTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp ATTAGGAGATTTATTACCCAGTTTCAGCATGTTGTTCCAGGATCCAGAACCTGTTCTTGGTCTTTTGGCTaGTATTTCATCAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: IRRFITQFQHVVPGSRTCSWSFG*YFISVH
Trigger: GTGGACACTGATGAAATACCAGCCAAAAGACCAAGA...ACAGGTTCTGGATCCTGGAACAACATGCTGAAACTGGGTAATAAATCTCCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439684.5
ENST00000458551.1
CDS-3UTR CCA 90 bp ATCATTCACGTGGGCGGAATACAAACTGACATTCCTAACAGGACTTACCTAGCACTAATCTTGGTCTTTTaGCTGGTATTTCATCAGTGT +
Preference number: 4 (lower is better)
Translates to: IIHVGGIQTDIPNRTYLALILVF*LVFHQC
Trigger: ACACTGATGAAATACCAGCCAAAAGACCAAGATTAG...TGCTAGGTAAGTCCTGTTAGGAATGTCAGTTTGTATTCCGCCCACGTGAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp TTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAACCACCAGCATGTCAGTTCACAAGATaGAGAGTTCGAAAATACCTC +
Preference number: 4 (lower is better)
Translates to: FNPQCMRYMEMSVKEPPACQFTR*RVRKYL
Trigger: GAGGTATTTTCGAACTCTTCATCTTGTGAACTGACA...TGCTGGTGGTTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR TCA 90 bp CCTTGTTTCAACAAGTCTATATTGTTTTGGAACAAACTGAGTTGTTTTGACTCCTGTTCTTGTGTGGGTTaGACAGTCCAAAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PCFNKSILFWNKLSCFDSCSCVG*TVQSSE
Trigger: CTCAGAGCTTTGGACTGTTCAACCCACACAAGAACA...GGAGTCAAAACAACTCAGTTTGTTCCAAAACAATATAGACTTGTTGAAACAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR TCA 90 bp TTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAACCACCAGCAATGTTTGCAAACGAGTaGGTGAATGAATACGCTGAA +
Preference number: 4 (lower is better)
Translates to: FNPQCMRYMEMSVKEPPAMFANE*VNEYAE
Trigger: TTCAGCGTATTCATTCACTCACTCGTTTGCAAACAT...TGCTGGTGGTTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR GCA 90 bp CAGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAAGGTTTTCTGAAGTTGTaGTTAGGATTTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QGLFNPQCMRYMEMSVKEGFLKL*LGFQRR
Trigger: CCTCCTCTGAAATCCTAAGCACAACTTCAGAAAACC...TTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp AACTGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGAGATTTATTACCAAGCAGAAGTTACCATaGGCTTTGTGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: NCHSDLWIVTYSIRRFITKQKLP*ALWSAG
Trigger: TCCAGCTGACCACAAAGCCCATGGTAACTTCTGCTT...GGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453532.5
ENST00000458551.1
CDS-3UTR CCA 90 bp TTATGTCCTGCAAGTTTTAAGAGCCGTCCGGAAGAGTGTAGGTTAATGGAAAGCTGTCACTCTGATCTTTaGATAGTCACTTATTCCATT +
Preference number: 4 (lower is better)
Translates to: LCPASFKSRPEECRLMESCHSDL*IVTYSI
Trigger: AATGGAATAAGTGACTATCCAAAGATCAGAGTGACA...GCTTTCCATTAACCTACACTCTTCCGGACGGCTCTTAAAACTTGCAGGACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
3UTR CAA 72 bp ATTCCATTAGGAGATTTATTACCCAGTTTCAGCATGTaGTTCCAGGATCCAGAACCTGTCAGTTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: IPLGDLLPSFSM*FQDPEPVSSQD
Trigger: ATCTTGTGAACTGACAGGTTCTGGATCCTGGAACAACATGCTGAAACTGGGTAATAAATCTCCTAATGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458551.1
CDS-3UTR GCA 90 bp TGGCAACCTCAGAGCCAAGTACTAAATTTTCTTCCACAAATTTCAGTGGGGATGCTTTTTAACCCACAATaGATGAGGTATATGGAAATG +
Preference number: 4 (lower is better)
Translates to: WQPQSQVLNFLPQISVGMLFNPQ*MRYMEM
Trigger: CATTTCCATATACCTCATGCATTGTGGGTTAAAAAG...CATCCCCACTGAAATTTGTGGAAGAAAATTTAGTACTTGGCTCTGAGGTTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR GCA 90 bp TTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAACCACCAGCACTAGGCACTAGATCTTaGAAAATATGTTCTGACCAA +
Preference number: 4 (lower is better)
Translates to: FNPQCMRYMEMSVKEPPALGTRS*KICSDQ
Trigger: TTGGTCAGAACATATTTTGCAAGATCTAGTGCCTAG...TGCTGGTGGTTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp AAAACTATATTACTAACATGTTTCCTTATGCCAAGGGAGACATGTGAGTGCCTAGGAATCCAAATAAGCTaGCAGCATTGTAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: KTILLTCFLMPRETCECLGIQIS*QHCRDC
Trigger: ACAGTCTCTACAATGCTGCCAGCTTATTTGGATTCC...TAGGCACTCACATGTCTCCCTTGGCATAAGGAAACATGTTAGTAATATAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CCA 90 bp ATTTATTACCCAGTTTCAGCATGTTGTTCCAGGATCCAGAACCTGTCAGTTCACTGTCACTCTGATCTTTaGATAGTCACTTATTCCATT +
Preference number: 4 (lower is better)
Translates to: IYYPVSACCSRIQNLSVHCHSDL*IVTYSI
Trigger: AATGGAATAAGTGACTATCCAAAGATCAGAGTGACA...GTGAACTGACAGGTTCTGGATCCTGGAACAACATGCTGAAACTGGGTAATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458551.1
CDS-3UTR TCA 90 bp AACTGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGAGATTTATTACCTGTCAGTTCACAAGATaGAGAGTTCGAAAATACCTC +
Preference number: 4 (lower is better)
Translates to: NCHSDLWIVTYSIRRFITCQFTR*RVRKYL
Trigger: GAGGTATTTTCGAACTCTTCATCTTGTGAACTGACA...GGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458551.1
CDS-3UTR GCA 90 bp CAGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAATCCAGTTTTACCTCTTaGTTTTATGAACCAGAACAA +
Preference number: 4 (lower is better)
Translates to: QGLFNPQCMRYMEMSVKESSFTS*FYEPEQ
Trigger: TTGTTCTGGTTCATAAAAGCAAGAGGTAAAACTGGA...TTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS GCA 90 bp GGCCGACACACCCCGAGACGCAAACCCCAGAGCTGTCGCCGCCGCTaGCGCCTTCGCCGTCTTAACCACCACCGCCAGAGTTCGGTCGCT +
Preference number: 5 (lower is better)
Translates to: GRHTPRRKPQSCRRR*RLRRLNHHRQSSVA
Trigger: AGCGACCGAACTCTGGCGGTGGTGGTTAAGACGGCGAAGGCGGCAGCGGCGGCGACAGCTCTGGGGTTTGCGTCTCGGGGTGTGTCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296257.10
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
ENST00000458551.1
CDS-3UTR CAA 90 bp CCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGCTTGAGTCTCCTGAGTAAGCCATaGCTTCCACTGCCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: PPPVRVPSCSSAGSGSLSLLSKP*LPLPRR
Trigger: CCGCCTGGGCAGTGGAAGCAATGGCTTACTCAGGAG...ACTCAAGCTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CAA 90 bp CCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGAGTGGCAGCTTGAGTCTCTCTGGATTACCTTaGCTATGGCGACGGCCACCT +
Preference number: 5 (lower is better)
Translates to: PPPVRVPSCSSAGSGSLSLSGLP*LWRRPP
Trigger: AGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAG...ACTCAAGCTGCCACTCCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CAA 90 bp CAGCTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGGCCTTACAAACAGGATaGCAAGCAGCCCTCTGCACC +
Preference number: 5 (lower is better)
Translates to: QLHFLPPPVRVPSCSSAGALQTG*QAALCT
Trigger: GGTGCAGAGGGCTGCTTGCAATCCTGTTTGTAAGGC...CCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS TCA 90 bp CTTCGCCGTCTTAACCACCACCGCCAGAGTTCGGTCGCTGATTTGTaGCGCGATTCAAGAGCCCACAGATACAGCGTCCCCAGGGCTACC +
Preference number: 5 (lower is better)
Translates to: LRRLNHHRQSSVADL*RDSRAHRYSVPRAT
Trigger: GGTAGCCCTGGGGACGCTGTATCTGTGGGCTCTTGAATCGCGTCACAAATCAGCGACCGAACTCTGGCGGTGGTGGTTAAGACGGCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453532.5
CDS-3UTR CAA 90 bp ACACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCACTCCTGAGTAAGCCATaGCTTCCACTGCCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: TPSSTVQWGRLRPLPLSSLLSKP*LPLPRR
Trigger: CCGCCTGGGCAGTGGAAGCAATGGCTTACTCAGGAG...TGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS CCA 90 bp CAGAGTGCTGGGACTTGTCTGCCAGTTGGTGCCTTCGCTGTCCTGTaGTCCACAGTAGAGACATGGGTGACTGTCCATCCACTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: QSAGTCLPVGAFAVL*STVETWVTVHPLAK
Trigger: CTTGGCCAGTGGATGGACAGTCACCCATGTCTCTACTGTGGACCACAGGACAGCGAAGGCACCAACTGGCAGACAAGTCCCAGCACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS-3UTR CAA 90 bp GAGAGGTGTGGTACAACCTGCTCCCGCTTCAGTCATCACCCACCACATGGCCTCGGACGCCTCAGACCCTaGCCACTCTCTTCAGAAATC +
Preference number: 5 (lower is better)
Translates to: ERCGTTCSRFSHHPPHGLGRLRP*PLSSEI
Trigger: GATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCC...GAGGCCATGTGGTGGGTGATGACTGAAGCGGGAGCAGGTTGTACCACACCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp CAGCTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGCTTCTGTCCCTCTCTTaGCCTGAGCAATTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: QLHFLPPPVRVPSCSSAGLLSLS*PEQFFS
Trigger: GGAAAAGAATTGCTCAGGCAAAGAGAGGGACAGAAG...CCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CAA 90 bp CAGCTCCACTTCCTTCCGCCCCCAGTGAGAGTTCCCTCCTGCTCTTCAGCAGGGGATCCTGTGGCCCTTTaGTCCCATAGAATCCAGATA +
Preference number: 5 (lower is better)
Translates to: QLHFLPPPVRVPSCSSAGDPVAL*SHRIQI
Trigger: TATCTGGATTCTATGGGACAAAAGGGCCACAGGATC...CCCTGCTGAAGAGCAGGAGGGAACTCTCACTGGGGGCGGAAGGAAGTGGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CAA 90 bp CCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGCCCACACCCACACCTaGGTCCCCACATCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: PKSGLEYSERPSCTFDSSAHTHT*VPTSSS
Trigger: GCTGCTTGATGTGGGGACCAAGGTGTGGGTGTGGGC...TGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp GAGAGGTGTGGTACAACCTGCTCCCGCTTCAGTCATCACCCACCACATGGCCTCACTCCCATTCAGCTGTaGAGGAATCTCGTGTGGTTT +
Preference number: 5 (lower is better)
Translates to: ERCGTTCSRFSHHPPHGLTPIQL*RNLVWF
Trigger: AAACCACACGAGATTCCTCAACAGCTGAATGGGAGT...GAGGCCATGTGGTGGGTGATGACTGAAGCGGGAGCAGGTTGTACCACACCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp GGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGCCTTACAAACAGGATaGCAAGCAGCCCTCTGCACC +
Preference number: 5 (lower is better)
Translates to: GDASDPCHSLQKSSLLQPALQTG*QAALCT
Trigger: GGTGCAGAGGGCTGCTTGCAATCCTGTTTGTAAGGC...AGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CAA 90 bp CTGCCCAGGCGGAGTCGGGCCGACACTTCTTCTGATAGGTCAGGCTCCAGTTGGTCTAATCTTGGTCTTTaGGCTGGTATTTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: LPRRSRADTSSDRSGSSWSNLGL*AGISSV
Trigger: CACTGATGAAATACCAGCCAAAAGACCAAGATTAGA...CCAACTGGAGCCTGACCTATCAGAAGAAGTGTCGGCCCGACTCCGCCTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CAA 90 bp CCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAACTTCTGTCCCTCTCTTaGCCTGAGCAATTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PSSTVQWGRLRPLPLSSELLSLS*PEQFFS
Trigger: GGAAAAGAATTGCTCAGGCAAAGAGAGGGACAGAAG...TTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CAA 90 bp CCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAACTCCCATTCAGCTGTaGAGGAATCTCGTGTGGTTT +
Preference number: 5 (lower is better)
Translates to: PSSTVQWGRLRPLPLSSETPIQL*RNLVWF
Trigger: AAACCACACGAGATTCCTCAACAGCTGAATGGGAGT...TTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CAA 90 bp ACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACGGACGCCTCAGACCCTaGCCACTCTCTTCAGAAATC +
Preference number: 5 (lower is better)
Translates to: TMGTPQTLATLFRNHLCYGRLRP*PLSSEI
Trigger: GATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCC...GTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CAA 90 bp GCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGGACGCCTCAGACCCTaGCCACTCTCTTCAGAAATC +
Preference number: 5 (lower is better)
Translates to: ASDPCHSLQKSSLLQPVPGRLRP*PLSSEI
Trigger: GATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCC...AGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CAA 90 bp CACTGCCCAGGCGGAGTCGGGCCGACACTTCTTCTGATAGGTCAGGCTCCAGTTGAGAACTGTGATAATTaGAAGTTACAGGACAGACAG +
Preference number: 5 (lower is better)
Translates to: HCPGGVGPTLLLIGQAPVENCDN*KLQDRQ
Trigger: CTGTCTGTCCTGTAACTTCAAATTATCACAGTTCTC...AACTGGAGCCTGACCTATCAGAAGAAGTGTCGGCCCGACTCCGCCTGGGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CAA 90 bp CCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCACCCTCCAGCTTCATGTaGGCAGTTACTGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PKSGLEYSERPSCTFDSSPSSFM*AVTAPA
Trigger: AGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGG...TGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CAA 90 bp TACCTCTGGGACCAGCAGCCGGAGCACTGCAAATGGCAGGCGTGTAGATTCATACTCTTCGGAAGATGCTaGGATAATCAGAGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: YLWDQQPEHCKWQACRFILFGRC*DNQSPL
Trigger: CAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAG...TATGAATCTACACGCCTGCCATTTGCAGTGCTCCGGCTGCTGGTCCCAGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp GAGAGGTGTGGTACAACCTGCTCCCGCTTCAGTCATCACCCACCACATGGCCTCTCTAATCTTGGTCTTTaGGCTGGTATTTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: ERCGTTCSRFSHHPPHGLSNLGL*AGISSV
Trigger: CACTGATGAAATACCAGCCAAAAGACCAAGATTAGA...GAGGCCATGTGGTGGGTGATGACTGAAGCGGGAGCAGGTTGTACCACACCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp CTTTTCCATGTCCTCTGTAAGTTCAAGGAGATCGTCCGTTCTTCTGTCCCTCTCCTCTCTGGATTACCTTaGCTATGGCGACGGCCACCT +
Preference number: 5 (lower is better)
Translates to: LFHVLCKFKEIVRSSVPLLSGLP*LWRRPP
Trigger: AGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAG...GAGAGGGACAGAAGAACGGACGATCTCCTTGAACTTACAGAGGACATGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CAA 90 bp GCGTGGCTGATCTCGGGTAACTGTCACTCTGATCTTTGGATAGTCACTTATTCCCTCTCTGGATTACCTTaGCTATGGCGACGGCCACCT +
Preference number: 5 (lower is better)
Translates to: AWLISGNCHSDLWIVTYSLSGLP*LWRRPP
Trigger: AGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAG...GGAATAAGTGACTATCCAAAGATCAGAGTGACAGTTACCCGAGATCAGCCACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CAA 90 bp GAGAGGTGTGGTACAACCTGCTCCCGCTTCAGTCATCACCCACCACATGGCCTCGAGAACTGTGATAATTaGAAGTTACAGGACAGACAG +
Preference number: 5 (lower is better)
Translates to: ERCGTTCSRFSHHPPHGLENCDN*KLQDRQ
Trigger: CTGTCTGTCCTGTAACTTCAAATTATCACAGTTCTC...GAGGCCATGTGGTGGGTGATGACTGAAGCGGGAGCAGGTTGTACCACACCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp CCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGCCCAGTTTCAGCATGTaGTTCCAGGATCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: PQTLATLFRNHLCYSLFLPSFSM*FQDPEP
Trigger: AGGTTCTGGATCCTGGAACAACATGCTGAAACTGGG...CAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CAA 90 bp GTTCAAAGTAAAACCAAAGGAAGGCAGGACTCTGCGTGGCTGATCTCGGGTAACCCCAGTTTCAGCATGTaGTTCCAGGATCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: VQSKTKGRQDSAWLISGNPSFSM*FQDPEP
Trigger: AGGTTCTGGATCCTGGAACAACATGCTGAAACTGGG...GTTACCCGAGATCAGCCACGCAGAGTCCTGCCTTCCTTTGGTTTTACTTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CAA 90 bp CACCCTCCTCCACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAACATAGAGGTCCCCTaGTTTCAACAAGTCTATATT +
Preference number: 5 (lower is better)
Translates to: HPPPQYNGDASDPCHSLQNIEVP*FQQVYI
Trigger: AATATAGACTTGTTGAAACAAGGGGACCTCTATGTT...CTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CAA 90 bp AAGGTGACCACAACACTCTTCGGAAGATGCTTGGATAATCAGAGTCCCTTGGGCGCAGGGAGTGGCAGCTaGAGTAACATTCCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: KVTTTLFGRCLDNQSPLGAGSGS*SNIPFR
Trigger: TCTGAAAGGAATGTTACTCAAGCTGCCACTCCCTGC...GCCCAAGGGACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp ACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGATCCTGTGGCCCTTTaGTCCCATAGAATCCAGATA +
Preference number: 5 (lower is better)
Translates to: TVQWGRLRPLPLSSEIISDPVAL*SHRIQI
Trigger: TATCTGGATTCTATGGGACAAAAGGGCCACAGGATC...AGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CAA 90 bp CACATTAAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTGCAGGGAGTGGCAGCTaGAGTAACATTCCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: HIKELSGLPLLWRRPPGLAGSGS*SNIPFR
Trigger: TCTGAAAGGAATGTTACTCAAGCTGCCACTCCCTGC...AAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413407.5
CDS-3UTR CAA 90 bp ATCATTCACGTGGGCGGAATACAAACTGACATTCCTAACAGGACTTACCTAGCACCCTCCAGCTTCATGTaGGCAGTTACTGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: IIHVGGIQTDIPNRTYLAPSSFM*AVTAPA
Trigger: AGCTGGAGCAGTAACTGCCAACATGAAGCTGGAGGG...TGCTAGGTAAGTCCTGTTAGGAATGTCAGTTTGTATTCCGCCCACGTGAATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp TACCTCTGGGACCAGCAGCCGGAGCACTGCAAATGGCAGGCGTGTAGATTCATATGTTCAAGGTCAAGTTaGAGAAAGATACGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: YLWDQQPEHCKWQACRFICSRSS*RKIRVL
Trigger: GAGAACACGTATCTTTCTCAAACTTGACCTTGAACA...TATGAATCTACACGCCTGCCATTTGCAGTGCTCCGGCTGCTGGTCCCAGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS CCA 90 bp AGGCCATATGGAGTAACAAGGACATTGAGATTTCTGCCCTTGGCTTaGATAATTTGCAGCCTTGTACTGCAAGAGGGGCACAACCTCATC +
Preference number: 5 (lower is better)
Translates to: RPYGVTRTLRFLPLA*IICSLVLQEGHNLI
Trigger: GATGAGGTTGTGCCCCTCTTGCAGTACAAGGCTGCAAATTATCCAAGCCAAGGGCAGAAATCTCAATGTCCTTGTTACTCCATATGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS-3UTR CAA 90 bp GGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTTCTAATCTTGGTCTTTaGGCTGGTATTTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: GDASDPCHSLQKSSLLQPSNLGL*AGISSV
Trigger: CACTGATGAAATACCAGCCAAAAGACCAAGATTAGA...AGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR CAA 90 bp CTTGCCACTCTCTTCAGAAATCATCTCTGTTACAGCCTGTTCCTGAGGTTTCCAAAGTTACCATGGGCTTaGTGGTCAGCTGGAATGGGA +
Preference number: 5 (lower is better)
Translates to: LATLFRNHLCYSLFLRFPKLPWA*WSAGMG
Trigger: TCCCATTCCAGCTGACCACAAAGCCCATGGTAACTT...TGGAAACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGAGTGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413407.5
ENST00000453532.5
CDS-3UTR CAA 90 bp TACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCAGTACCTGTGAGAACAGAACCCAGTTTCAGCATGTaGTTCCAGGATCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: YSERPSCTFDSSVPVRTEPSFSM*FQDPEP
Trigger: AGGTTCTGGATCCTGGAACAACATGCTGAAACTGGG...TTCTGTTCTCACAGGTACTGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp ACAGTACAATGGGGACGCCTCAGACCCTTGCCACTCTCTTCAGAAATCATCTCTCCTAATCTTGGTCTTTaGGCTGGTATTTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: TVQWGRLRPLPLSSEIISPNLGL*AGISSV
Trigger: CACTGATGAAATACCAGCCAAAAGACCAAGATTAGG...AGAGATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439684.5
CDS-3UTR CAA 90 bp TGGCAACCTCAGAGCCAAGTACTAAATTTTCTTCCACAAATTTCAGTGGGGATGAAGTTACCATGGGCTTaGTGGTCAGCTGGAATGGGA +
Preference number: 5 (lower is better)
Translates to: WQPQSQVLNFLPQISVGMKLPWA*WSAGMG
Trigger: TCCCATTCCAGCTGACCACAAAGCCCATGGTAACTT...CATCCCCACTGAAATTTGTGGAAGAAAATTTAGTACTTGGCTCTGAGGTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp TGGCAACCTCAGAGCCAAGTACTAAATTTTCTTCCACAAATTTCAGTGGGGATGGATAATCAGAGTCCCTaGGGCACAGTTCCACTGTTC +
Preference number: 5 (lower is better)
Translates to: WQPQSQVLNFLPQISVGMDNQSP*GTVPLF
Trigger: GAACAGTGGAACTGTGCCCAAGGGACTCTGATTATC...CATCCCCACTGAAATTTGTGGAAGAAAATTTAGTACTTGGCTCTGAGGTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp GACTCGATCTTAACCATGGTACCAAACTCTCAAGTGAAGCACACTGATGCCTGGATCCATGAATCCAGTTaGAAGACTAAGCCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: DSILTMVPNSQVKHTDAWIHESS*KTKPSH
Trigger: GTGACTTGGCTTAGTCTTCAAACTGGATTCATGGAT...CCAGGCATCAGTGTGCTTCACTTGAGAGTTTGGTACCATGGTTAAGATCGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp GACTCGATCTTAACCATGGTACCAAACTCTCAAGTGAAGCACACTGATGCCTGGCATGGTTTTCTGAAGTaGTGCTTAGGATTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: DSILTMVPNSQVKHTDAWHGFLK*CLGFQR
Trigger: CCTCTGAAATCCTAAGCACAACTTCAGAAAACCATG...CCAGGCATCAGTGTGCTTCACTTGAGAGTTTGGTACCATGGTTAAGATCGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp TGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGAGATTTATTACCCAGCTCTCTGGATTACCTTaGCTATGGCGACGGCCACCT +
Preference number: 5 (lower is better)
Translates to: CHSDLWIVTYSIRRFITQLSGLP*LWRRPP
Trigger: AGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAG...CTGGGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CAA 90 bp TGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGAGATTTATTACCCAGGGACGCCTCAGACCCTaGCCACTCTCTTCAGAAATC +
Preference number: 5 (lower is better)
Translates to: CHSDLWIVTYSIRRFITQGRLRP*PLSSEI
Trigger: GATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCC...CTGGGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439684.5
ENST00000453532.5
CDS-3UTR CAA 90 bp CCCAAGTCAGGACTAGAGTACAGTGAGAGGCCTTCATGCACTTTTGACAGCTCACACCAGAATAATTTCTaGTTCAAAGAGATTTACCCC +
Preference number: 5 (lower is better)
Translates to: PKSGLEYSERPSCTFDSSHQNNF*FKEIYP
Trigger: GGGGTAAATCTCTTTGAACAAGAAATTATTCTGGTG...TGAGCTGTCAAAAGTGCATGAAGGCCTCTCACTGTACTCTAGTCCTGACTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS-3UTR CAA 90 bp CAGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAAGAACCTCTGGCCTTTTaGGCTGTGCTCATTACCTGG +
Preference number: 5 (lower is better)
Translates to: QGLFNPQCMRYMEMSVKEEPLAF*AVLITW
Trigger: CCAGGTAATGAGCACAGCCAAAAAGGCCAGAGGTTC...TTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp CCATGGGCTTTGTGGTCAGCTGGAATGGGAATCCAAATAAGCTGGCAGCATTGTGTCAACAAACTAATCTaGGTCTTTTGGCTGGTATTT +
Preference number: 5 (lower is better)
Translates to: PWALWSAGMGIQISWQHCVNKLI*VFWLVF
Trigger: AAATACCAGCCAAAAGACCAAGATTAGTTTGTTGAC...ACAATGCTGCCAGCTTATTTGGATTCCCATTCCAGCTGACCACAAAGCCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458551.1
CDS-3UTR CAA 90 bp GACTCGATCTTAACCATGGTACCAAACTCTCAAGTGAAGCACACTGATGCCTGGAACATAGAGGTCCCCTaGTTTCAACAAGTCTATATT +
Preference number: 5 (lower is better)
Translates to: DSILTMVPNSQVKHTDAWNIEVP*FQQVYI
Trigger: AATATAGACTTGTTGAAACAAGGGGACCTCTATGTT...CCAGGCATCAGTGTGCTTCACTTGAGAGTTTGGTACCATGGTTAAGATCGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp CCTCAAAATAATACATTAAGCTCAGCATCATTCACGTGGGCGGAATACAAACTGAAGAGATTTACCCCTTaGGTCCATCGTTTCACTGCT +
Preference number: 5 (lower is better)
Translates to: PQNNTLSSASFTWAEYKLKRFTP*VHRFTA
Trigger: AGCAGTGAAACGATGGACCAAAGGGGTAAATCTCTT...CAGTTTGTATTCCGCCCACGTGAATGATGCTGAGCTTAATGTATTATTTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296257.10
CDS-3UTR CAA 90 bp AAAGAACTCTCTGGATTACCTTTGCTATGGCGACGGCCACCTGGTCTTCTATTACGAAAATACCTAATCTaGGTCTTTTGGCTGGTATTT +
Preference number: 5 (lower is better)
Translates to: KELSGLPLLWRRPPGLLLRKYLI*VFWLVF
Trigger: AAATACCAGCCAAAAGACCAAGATTAGGTATTTTCG...TAATAGAAGACCAGGTGGCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439684.5
CDS-3UTR CAA 90 bp TTACCCAGTTTCAGCATGTTGTTCCAGGATCCAGAACCTGTCAGTTCACAAGATACTAATCTTGGTCTTTaGGCTGGTATTTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: LPSFSMLFQDPEPVSSQDTNLGL*AGISSV
Trigger: CACTGATGAAATACCAGCCAAAAGACCAAGATTAGT...ATCTTGTGAACTGACAGGTTCTGGATCCTGGAACAACATGCTGAAACTGGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458551.1
CDS-3UTR CAA 90 bp GGTAACTGTCACTCTGATCTTTGGATAGTCACTTATTCCATTAGGAGATTTATTCCCAGTTTCAGCATGTaGTTCCAGGATCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: GNCHSDLWIVTYSIRRFIPSFSM*FQDPEP
Trigger: AGGTTCTGGATCCTGGAACAACATGCTGAAACTGGG...AATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439684.5
ENST00000453532.5
ENST00000458551.1
CDS-3UTR CAA 90 bp CAGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAAAAGAGATTTACCCCTTaGGTCCATCGTTTCACTGCT +
Preference number: 5 (lower is better)
Translates to: QGLFNPQCMRYMEMSVKEKRFTP*VHRFTA
Trigger: AGCAGTGAAACGATGGACCAAAGGGGTAAATCTCTT...TTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS TCA 90 bp TTTCAGCTTACAGAGTTTCCACAACATCAAGACATTCCTCTACATTaGAATGCTACAGTGAATTCCAAAGACACTAGCCTCCCTATATAC +
Preference number: 5 (lower is better)
Translates to: FQLTEFPQHQDIPLH*NATVNSKDTSLPIY
Trigger: GTATATAGGGAGGCTAGTGTCTTTGGAATTCACTGTAGCATTTCAATGTAGAGGAATGTCTTGATGTTGTGGAAACTCTGTAAGCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476011.1
CDS-3UTR CAA 90 bp TTTAACCCACAATGCATGAGGTATATGGAAATGTCTGTGAAAGAACCACCAGCACACCAGAATAATTTCTaGTTCAAAGAGATTTACCCC +
Preference number: 5 (lower is better)
Translates to: FNPQCMRYMEMSVKEPPAHQNNF*FKEIYP
Trigger: GGGGTAAATCTCTTTGAACAAGAAATTATTCTGGTG...TGCTGGTGGTTCTTTCACAGACATTTCCATATACCTCATGCATTGTGGGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296257.10
ENST00000413407.5
CDS TCA 90 bp AGTTTCCACAACATCAAGACATTCCTCTACATTGAAATGCTACAGTaGATTCCAAAGACACTAGCCTCCCTATATACTAAGTTGCCTAAA +
Preference number: 5 (lower is better)
Translates to: SFHNIKTFLYIEMLQ*IPKTLASLYTKLPK
Trigger: TTTAGGCAACTTAGTATATAGGGAGGCTAGTGTCTTTGGAATTCACTGTAGCATTTCAATGTAGAGGAATGTCTTGATGTTGTGGAAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476011.1
CDS GCA 72 bp ACCCCGAGACGCAAACCCCAGAGCTGTCGCCGCCGCTaGCGCCTTCGCCGTCTTAACCACCACCGCCAGAGT +
Preference number: 6 (lower is better)
Translates to: TPRRKPQSCRRR*RLRRLNHHRQS
Trigger: ACTCTGGCGGTGGTGGTTAAGACGGCGAAGGCGGCAGCGGCGGCGACAGCTCTGGGGTTTGCGTCTCGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296257.10
ENST00000413407.5
ENST00000439684.5
ENST00000453532.5
ENST00000458551.1
CDS CCA 72 bp GGTGCCTTCGCTGTCCTGTGGTCCACAGTAGAGACATaGGTGACTGTCCATCCACTGGCCAAGGAGTGGGAT +
Preference number: 6 (lower is better)
Translates to: GAFAVLWSTVET*VTVHPLAKEWD
Trigger: ATCCCACTCCTTGGCCAGTGGATGGACAGTCACCCATGTCTCTACTGTGGACCACAGGACAGCGAAGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS TCA 72 bp CTTAACCACCACCGCCAGAGTTCGGTCGCTGATTTGTaGCGCGATTCAAGAGCCCACAGATACAGCGTCCCC +
Preference number: 6 (lower is better)
Translates to: LNHHRQSSVADL*RDSRAHRYSVP
Trigger: GGGGACGCTGTATCTGTGGGCTCTTGAATCGCGTCACAAATCAGCGACCGAACTCTGGCGGTGGTGGTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453532.5
CDS CCA 72 bp GGGACTTGTCTGCCAGTTGGTGCCTTCGCTGTCCTGTaGTCCACAGTAGAGACATGGGTGACTGTCCATCCA +
Preference number: 6 (lower is better)
Translates to: GTCLPVGAFAVL*STVETWVTVHP
Trigger: TGGATGGACAGTCACCCATGTCTCTACTGTGGACCACAGGACAGCGAAGGCACCAACTGGCAGACAAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS CCA 72 bp TTTACTGGAGGGCCATGGGAGAATCCCAAGGCCATATaGAGTAACAAGGACATTGAGATTTCTGCCCTTGGC +
Preference number: 6 (lower is better)
Translates to: FTGGPWENPKAI*SNKDIEISALG
Trigger: GCCAAGGGCAGAAATCTCAATGTCCTTGTTACTCCATATGGCCTTGGGATTCTCCCATGGCCCTCCAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS CAA 90 bp GAGGGCCATGGGAGAATCCCAAGGCCATATGGAGTAACAAGGACATaGAGATTTCTGCCCTTGGCTTGGATAATTTGCAGCCTTGTACTG +
Preference number: 6 (lower is better)
Translates to: EGHGRIPRPYGVTRT*RFLPLAWIICSLVL
Trigger: CAGTACAAGGCTGCAAATTATCCAAGCCAAGGGCAGAAATCTCAATGTCCTTGTTACTCCATATGGCCTTGGGATTCTCCCATGGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS GCA 72 bp AGGACATTGAGATTTCTGCCCTTGGCTTGGATAATTTaGAGCCTTGTACTGCAAGAGGGGCACAACCTCATC +
Preference number: 6 (lower is better)
Translates to: RTLRFLPLAWII*SLVLQEGHNLI
Trigger: GATGAGGTTGTGCCCCTCTTGCAGTACAAGGCTGCAAATTATCCAAGCCAAGGGCAGAAATCTCAATGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS CCA 72 bp GGAGTAACAAGGACATTGAGATTTCTGCCCTTGGCTTaGATAATTTGCAGCCTTGTACTGCAAGAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: GVTRTLRFLPLA*IICSLVLQEGH
Trigger: GTGCCCCTCTTGCAGTACAAGGCTGCAAATTATCCAAGCCAAGGGCAGAAATCTCAATGTCCTTGTTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS CAA 90 bp TGGAGTAACAAGGACATTGAGATTTCTGCCCTTGGCTTGGATAATTaGCAGCCTTGTACTGCAAGAGGGGCACAACCTCATCGCTTAAGC +
Preference number: 6 (lower is better)
Translates to: WSNKDIEISALGLDN*QPCTARGAQPHRLS
Trigger: GCTTAAGCGATGAGGTTGTGCCCCTCTTGCAGTACAAGGCTGCAAATTATCCAAGCCAAGGGCAGAAATCTCAATGTCCTTGTTACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS CAA 90 bp ATCCCAAGGCCATATGGAGTAACAAGGACATTGAGATTTCTGCCCTaGGCTTGGATAATTTGCAGCCTTGTACTGCAAGAGGGGCACAAC +
Preference number: 6 (lower is better)
Translates to: IPRPYGVTRTLRFLP*AWIICSLVLQEGHN
Trigger: GTTGTGCCCCTCTTGCAGTACAAGGCTGCAAATTATCCAAGCCAAGGGCAGAAATCTCAATGTCCTTGTTACTCCATATGGCCTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS CAA 90 bp AAGGCCATATGGAGTAACAAGGACATTGAGATTTCTGCCCTTGGCTaGGATAATTTGCAGCCTTGTACTGCAAGAGGGGCACAACCTCAT +
Preference number: 6 (lower is better)
Translates to: KAIWSNKDIEISALG*DNLQPCTARGAQPH
Trigger: ATGAGGTTGTGCCCCTCTTGCAGTACAAGGCTGCAAATTATCCAAGCCAAGGGCAGAAATCTCAATGTCCTTGTTACTCCATATGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS CAA 72 bp AAGGACATTGAGATTTCTGCCCTTGGCTTGGATAATTaGCAGCCTTGTACTGCAAGAGGGGCACAACCTCAT +
Preference number: 6 (lower is better)
Translates to: KDIEISALGLDN*QPCTARGAQPH
Trigger: ATGAGGTTGTGCCCCTCTTGCAGTACAAGGCTGCAAATTATCCAAGCCAAGGGCAGAAATCTCAATGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS CAA 72 bp TGGAGTAACAAGGACATTGAGATTTCTGCCCTTGGCTaGGATAATTTGCAGCCTTGTACTGCAAGAGGGGCA +
Preference number: 6 (lower is better)
Translates to: WSNKDIEISALG*DNLQPCTARGA
Trigger: TGCCCCTCTTGCAGTACAAGGCTGCAAATTATCCAAGCCAAGGGCAGAAATCTCAATGTCCTTGTTACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS CAA 72 bp GGGAGAATCCCAAGGCCATATGGAGTAACAAGGACATaGAGATTTCTGCCCTTGGCTTGGATAATTTGCAGC +
Preference number: 6 (lower is better)
Translates to: GRIPRPYGVTRT*RFLPLAWIICS
Trigger: GCTGCAAATTATCCAAGCCAAGGGCAGAAATCTCAATGTCCTTGTTACTCCATATGGCCTTGGGATTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS CAA 72 bp ATTCCATTAGGAGATTTATTACCCAGTTTCAGCATGTaGTTCCAGGATCCAGAACCTCTCCTGAAGGGGCCA +
Preference number: 6 (lower is better)
Translates to: IPLGDLLPSFSM*FQDPEPLLKGP
Trigger: TGGCCCCTTCAGGAGAGGTTCTGGATCCTGGAACAACATGCTGAAACTGGGTAATAAATCTCCTAATGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453532.5
CDS CAA 72 bp CCATATGGAGTAACAAGGACATTGAGATTTCTGCCCTaGGCTTGGATAATTTGCAGCCTTGTACTGCAAGAG +
Preference number: 6 (lower is better)
Translates to: PYGVTRTLRFLP*AWIICSLVLQE
Trigger: CTCTTGCAGTACAAGGCTGCAAATTATCCAAGCCAAGGGCAGAAATCTCAATGTCCTTGTTACTCCATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430355.5
CDS TCA 72 bp TCTCTACTCACCACCAGGCTCCAATGTACCTTCCGATaGATAGGCACCAGAATAATTTCTTGTTCAAAGAGA +
Preference number: 6 (lower is better)
Translates to: SLLTTRLQCTFR*IGTRIISCSKR
Trigger: TCTCTTTGAACAAGAAATTATTCTGGTGCCTATTCATCGGAAGGTACATTGGAGCCTGGTGGTGAGTAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483005.1
CDS TCA 72 bp AACATCAAGACATTCCTCTACATTGAAATGCTACAGTaGATTCCAAAGACACTAGCCTCCCTATATACTAAG +
Preference number: 6 (lower is better)
Translates to: NIKTFLYIEMLQ*IPKTLASLYTK
Trigger: CTTAGTATATAGGGAGGCTAGTGTCTTTGGAATTCACTGTAGCATTTCAATGTAGAGGAATGTCTTGATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476011.1