RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SENCR (Homo sapiens)

Ensembl gene IDs: ENSG00000254703

Ensembl transcript IDs: ENST00000526269.2

Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GAAGATGCGGATAGGTGGCCTAGGGCGCCGCGGATCTCCGCCCTCTaGGGGCACCGGGAGCCCAGGGTCGAGGCGCGCCGCCCCGAGGGG +
Preference number: 5 (lower is better)
Translates to: EDADRWPRAPRISAL*GHREPRVEARRPEG
Trigger: CCCCTCGGGGCGGCGCGCCTCGACCCTGGGCTCCCGGTGCCCGCAGAGGGCGGAGATCCGCGGCGCCCTAGGCCACCTATCCGCATCTTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 90 bp GCGGGGAGGTCTCCGGGTTGGGCCGGGGAACGCCGGCCTCCAGGCTaGGTAGGGAGGACGGTCCAGAGCGCGGGCCTCCGGGTCTCACCC +
Preference number: 5 (lower is better)
Translates to: AGRSPGWAGERRPPG*VGRTVQSAGLRVSP
Trigger: GGGTGAGACCCGGAGGCCCGCGCTCTGGACCGTCCTCCCTACCCAGCCTGGAGGCCGGCGTTCCCCGGCCCAACCCGGAGACCTCCCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 90 bp GTCCGGGTAAGCGCTGGGGGTTTGGCTCGAGAAGATGCGGATAGGTaGCCTAGGGCGCCGCGGATCTCCGCCCTCTGCGGGCACCGGGAG +
Preference number: 5 (lower is better)
Translates to: VRVSAGGLAREDADR*PRAPRISALCGHRE
Trigger: CTCCCGGTGCCCGCAGAGGGCGGAGATCCGCGGCGCCCTAGGCCACCTATCCGCATCTTCTCGAGCCAAACCCCCAGCGCTTACCCGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS TCA 90 bp CGCGGGTCAGCCCGAAACCGCCCAGAATCCGCTTCGATGAGTGGGTaGGCCGCTCTGGGAGTCTGCCGCGTCTCGGCAGCGGAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: RGSARNRPESASMSG*AALGVCRVSAAEGS
Trigger: AGAGCCCTCCGCTGCCGAGACGCGGCAGACTCCCAGAGCGGCTCACCCACTCATCGAAGCGGATTCTGGGCGGTTTCGGGCTGACCCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS TCA 90 bp CCTGACAGCGCGGGTCAGCCCGAAACCGCCCAGAATCCGCTTCGATaGGTGGGTGAGCCGCTCTGGGAGTCTGCCGCGTCTCGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: PDSAGQPETAQNPLR*VGEPLWESAASRQR
Trigger: CCGCTGCCGAGACGCGGCAGACTCCCAGAGCGGCTCACCCACTCATCGAAGCGGATTCTGGGCGGTTTCGGGCTGACCCGCGCTGTCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 90 bp ACAGCGCGGGTCAGCCCGAAACCGCCCAGAATCCGCTTCGATGAGTaGGTGAGCCGCTCTGGGAGTCTGCCGCGTCTCGGCAGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: TARVSPKPPRIRFDE*VSRSGSLPRLGSGG
Trigger: CCCTCCGCTGCCGAGACGCGGCAGACTCCCAGAGCGGCTCACCCACTCATCGAAGCGGATTCTGGGCGGTTTCGGGCTGACCCGCGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 90 bp GACGGTCCAGAGCGCGGGCCTCCGGGTCTCACCCCGGGAAAAGTCTaGGTCTGCTCTGCGCTGTTGCGTGCTGCGCTCCTGGGACCTGCT +
Preference number: 5 (lower is better)
Translates to: DGPERGPPGLTPGKV*VCSALLRAALLGPA
Trigger: AGCAGGTCCCAGGAGCGCAGCACGCAACAGCGCAGAGCAGACCCAGACTTTTCCCGGGGTGAGACCCGGAGGCCCGCGCTCTGGACCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS GCA 90 bp CCAGAGCGCGGGCCTCCGGGTCTCACCCCGGGAAAAGTCTGGGTCTaGTCTGCGCTGTTGCGTGCTGCGCTCCTGGGACCTGCTGACTGT +
Preference number: 5 (lower is better)
Translates to: PERGPPGLTPGKVWV*SALLRAALLGPADC
Trigger: ACAGTCAGCAGGTCCCAGGAGCGCAGCACGCAACAGCGCAGAGCAGACCCAGACTTTTCCCGGGGTGAGACCCGGAGGCCCGCGCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 90 bp GCGGTAGTGTCAGTTCCCTGGGGACCAGGAAGGGCGACTCTTGCCTaGGAGTCAGTGCTTGGGCCGTCGGGTCCGGGTAAGCGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: AVVSVPWGPGRATLA*ESVLGPSGPGKRWG
Trigger: CCCCCAGCGCTTACCCGGACCCGACGGCCCAAGCACTGACTCCCAGGCAAGAGTCGCCCTTCCTGGTCCCCAGGGAACTGACACTACCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS TCA 90 bp GGGGCCCCTTCTCCTAACAATGCGCCCGGAATGGAGTCCGCGCCCTaGCAGCGCGGGTCAGCCCGAAACCGCCCAGAATCCGCTTCGATG +
Preference number: 5 (lower is better)
Translates to: GAPSPNNAPGMESAP*QRGSARNRPESASM
Trigger: CATCGAAGCGGATTCTGGGCGGTTTCGGGCTGACCCGCGCTGTCAGGGCGCGGACTCCATTCCGGGCGCATTGTTAGGAGAAGGGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS GCA 90 bp CAGTTCCCTGGGGACCAGGAAGGGCGACTCTTGCCTGGGAGTCAGTaGTTGGGCCGTCGGGTCCGGGTAAGCGCTGGGGGTTTGGCTCGA +
Preference number: 5 (lower is better)
Translates to: QFPGDQEGRLLPGSQ*LGRRVRVSAGGLAR
Trigger: TCGAGCCAAACCCCCAGCGCTTACCCGGACCCGACGGCCCAAGCACTGACTCCCAGGCAAGAGTCGCCCTTCCTGGTCCCCAGGGAACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS GCA 90 bp CTCCGGGTCTCACCCCGGGAAAAGTCTGGGTCTGCTCTGCGCTGTTaGGTGCTGCGCTCCTGGGACCTGCTGACTGTCCTAGAGGGAACG +
Preference number: 5 (lower is better)
Translates to: LRVSPREKSGSALRC*VLRSWDLLTVLEGT
Trigger: CGTTCCCTCTAGGACAGTCAGCAGGTCCCAGGAGCGCAGCACGCAACAGCGCAGAGCAGACCCAGACTTTTCCCGGGGTGAGACCCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 90 bp CGGGAAAAGTCTGGGTCTGCTCTGCGCTGTTGCGTGCTGCGCTCCTaGGACCTGCTGACTGTCCTAGAGGGAACGTCCCGCGGTAGTGTC +
Preference number: 5 (lower is better)
Translates to: REKSGSALRCCVLRS*DLLTVLEGTSRGSV
Trigger: GACACTACCGCGGGACGTTCCCTCTAGGACAGTCAGCAGGTCCCAGGAGCGCAGCACGCAACAGCGCAGAGCAGACCCAGACTTTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 90 bp AAGTCCAAAGCGTGGTCCGGAGAGCGTGGACAAGGTAACCTGTTTTaGATGTCCGGGAGAAGGGAGTCCGGCCGAAAGGGCCCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: KSKAWSGERGQGNLF*MSGRRESGRKGPAP
Trigger: AGGGGCTGGGCCCTTTCGGCCGGACTCCCTTCTCCCGGACATCCAAAACAGGTTACCTTGTCCACGCTCTCCGGACCACGCTTTGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 90 bp TGGTGGAGTTGGAGTCCTTTCTGGCTGAATGAGGAGCAATGTGGCTaGGGTGTGCGGGTTTCTGGTGAGGTCCGGGTGGGAAGCCGTCTC +
Preference number: 5 (lower is better)
Translates to: WWSWSPFWLNEEQCG*GVRVSGEVRVGSRL
Trigger: GAGACGGCTTCCCACCCGGACCTCACCAGAAACCCGCACACCCCAGCCACATTGCTCCTCATTCAGCCAGAAAGGACTCCAACTCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 90 bp AGGAGCAATGTGGCTGGGGTGTGCGGGTTTCTGGTGAGGTCCGGGTaGGAAGCCGTCTCTCCGCATTCTCCTGAAAGCTCTGTTGTAGTT +
Preference number: 5 (lower is better)
Translates to: RSNVAGVCGFLVRSG*EAVSPHSPESSVVV
Trigger: AACTACAACAGAGCTTTCAGGAGAATGCGGAGAGACGGCTTCCCACCCGGACCTCACCAGAAACCCGCACACCCCAGCCACATTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS TCA 90 bp GTTTCTGGTGAGGTCCGGGTGGGAAGCCGTCTCTCCGCATTCTCCTaGAAGCTCTGTTGTAGTTTGAAGGTCGGTAGAGCCTGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: VSGEVRVGSRLSAFS*KLCCSLKVGRAWAF
Trigger: AAAAGCCCAGGCTCTACCGACCTTCAAACTACAACAGAGCTTTCAGGAGAATGCGGAGAGACGGCTTCCCACCCGGACCTCACCAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS GCA 72 bp GATAGGTGGCCTAGGGCGCCGCGGATCTCCGCCCTCTaGGGGCACCGGGAGCCCAGGGTCGAGGCGCGCCGC +
Preference number: 6 (lower is better)
Translates to: DRWPRAPRISAL*GHREPRVEARR
Trigger: GCGGCGCGCCTCGACCCTGGGCTCCCGGTGCCCGCAGAGGGCGGAGATCCGCGGCGCCCTAGGCCACCTATC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 72 bp TCTCCGGGTTGGGCCGGGGAACGCCGGCCTCCAGGCTaGGTAGGGAGGACGGTCCAGAGCGCGGGCCTCCGG +
Preference number: 6 (lower is better)
Translates to: SPGWAGERRPPG*VGRTVQSAGLR
Trigger: CCGGAGGCCCGCGCTCTGGACCGTCCTCCCTACCCAGCCTGGAGGCCGGCGTTCCCCGGCCCAACCCGGAGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS GCA 72 bp GGGGACCAGGAAGGGCGACTCTTGCCTGGGAGTCAGTaGTTGGGCCGTCGGGTCCGGGTAAGCGCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: GDQEGRLLPGSQ*LGRRVRVSAGG
Trigger: ACCCCCAGCGCTTACCCGGACCCGACGGCCCAAGCACTGACTCCCAGGCAAGAGTCGCCCTTCCTGGTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 72 bp CCCGAGGGGCCCCTTCTCCTAACAATGCGCCCGGAATaGAGTCCGCGCCCTGACAGCGCGGGTCAGCCCGAA +
Preference number: 6 (lower is better)
Translates to: PEGPLLLTMRPE*SPRPDSAGQPE
Trigger: TTCGGGCTGACCCGCGCTGTCAGGGCGCGGACTCCATTCCGGGCGCATTGTTAGGAGAAGGGGCCCCTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 72 bp AGCGCTGGGGGTTTGGCTCGAGAAGATGCGGATAGGTaGCCTAGGGCGCCGCGGATCTCCGCCCTCTGCGGG +
Preference number: 6 (lower is better)
Translates to: SAGGLAREDADR*PRAPRISALCG
Trigger: CCCGCAGAGGGCGGAGATCCGCGGCGCCCTAGGCCACCTATCCGCATCTTCTCGAGCCAAACCCCCAGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 72 bp GAGCGCGGGCCTCCGGGTCTCACCCCGGGAAAAGTCTaGGTCTGCTCTGCGCTGTTGCGTGCTGCGCTCCTG +
Preference number: 6 (lower is better)
Translates to: ERGPPGLTPGKV*VCSALLRAALL
Trigger: CAGGAGCGCAGCACGCAACAGCGCAGAGCAGACCCAGACTTTTCCCGGGGTGAGACCCGGAGGCCCGCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CAA 90 bp GGGAGTCAGTGCTTGGGCCGTCGGGTCCGGGTAAGCGCTGGGGGTTaGGCTCGAGAAGATGCGGATAGGTGGCCTAGGGCGCCGCGGATC +
Preference number: 6 (lower is better)
Translates to: GSQCLGRRVRVSAGG*AREDADRWPRAPRI
Trigger: GATCCGCGGCGCCCTAGGCCACCTATCCGCATCTTCTCGAGCCAAACCCCCAGCGCTTACCCGGACCCGACGGCCCAAGCACTGACTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS TCA 72 bp GCCCGAAACCGCCCAGAATCCGCTTCGATGAGTGGGTaGGCCGCTCTGGGAGTCTGCCGCGTCTCGGCAGCG +
Preference number: 6 (lower is better)
Translates to: ARNRPESASMSG*AALGVCRVSAA
Trigger: CGCTGCCGAGACGCGGCAGACTCCCAGAGCGGCTCACCCACTCATCGAAGCGGATTCTGGGCGGTTTCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS GCA 72 bp GGGCCTCCGGGTCTCACCCCGGGAAAAGTCTGGGTCTaGTCTGCGCTGTTGCGTGCTGCGCTCCTGGGACCT +
Preference number: 6 (lower is better)
Translates to: GPPGLTPGKVWV*SALLRAALLGP
Trigger: AGGTCCCAGGAGCGCAGCACGCAACAGCGCAGAGCAGACCCAGACTTTTCCCGGGGTGAGACCCGGAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS TCA 72 bp GCGGGTCAGCCCGAAACCGCCCAGAATCCGCTTCGATaGGTGGGTGAGCCGCTCTGGGAGTCTGCCGCGTCT +
Preference number: 6 (lower is better)
Translates to: AGQPETAQNPLR*VGEPLWESAAS
Trigger: AGACGCGGCAGACTCCCAGAGCGGCTCACCCACTCATCGAAGCGGATTCTGGGCGGTTTCGGGCTGACCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS GCA 72 bp AGTGTCAGTTCCCTGGGGACCAGGAAGGGCGACTCTTaGCTGGGAGTCAGTGCTTGGGCCGTCGGGTCCGGG +
Preference number: 6 (lower is better)
Translates to: SVSSLGTRKGDS*LGVSAWAVGSG
Trigger: CCCGGACCCGACGGCCCAAGCACTGACTCCCAGGCAAGAGTCGCCCTTCCTGGTCCCCAGGGAACTGACACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 72 bp GTCAGCCCGAAACCGCCCAGAATCCGCTTCGATGAGTaGGTGAGCCGCTCTGGGAGTCTGCCGCGTCTCGGC +
Preference number: 6 (lower is better)
Translates to: VSPKPPRIRFDE*VSRSGSLPRLG
Trigger: GCCGAGACGCGGCAGACTCCCAGAGCGGCTCACCCACTCATCGAAGCGGATTCTGGGCGGTTTCGGGCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CAA 72 bp TGCTTGGGCCGTCGGGTCCGGGTAAGCGCTGGGGGTTaGGCTCGAGAAGATGCGGATAGGTGGCCTAGGGCG +
Preference number: 6 (lower is better)
Translates to: CLGRRVRVSAGG*AREDADRWPRA
Trigger: CGCCCTAGGCCACCTATCCGCATCTTCTCGAGCCAAACCCCCAGCGCTTACCCGGACCCGACGGCCCAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CAA 72 bp GACCAGGAAGGGCGACTCTTGCCTGGGAGTCAGTGCTaGGGCCGTCGGGTCCGGGTAAGCGCTGGGGGTTTG +
Preference number: 6 (lower is better)
Translates to: DQEGRLLPGSQC*GRRVRVSAGGL
Trigger: CAAACCCCCAGCGCTTACCCGGACCCGACGGCCCAAGCACTGACTCCCAGGCAAGAGTCGCCCTTCCTGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CAA 90 bp TTCCCTGGGGACCAGGAAGGGCGACTCTTGCCTGGGAGTCAGTGCTaGGGCCGTCGGGTCCGGGTAAGCGCTGGGGGTTTGGCTCGAGAA +
Preference number: 6 (lower is better)
Translates to: FPGDQEGRLLPGSQC*GRRVRVSAGGLARE
Trigger: TTCTCGAGCCAAACCCCCAGCGCTTACCCGGACCCGACGGCCCAAGCACTGACTCCCAGGCAAGAGTCGCCCTTCCTGGTCCCCAGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS TCA 72 bp TCTCCTAACAATGCGCCCGGAATGGAGTCCGCGCCCTaGCAGCGCGGGTCAGCCCGAAACCGCCCAGAATCC +
Preference number: 6 (lower is better)
Translates to: SPNNAPGMESAP*QRGSARNRPES
Trigger: GGATTCTGGGCGGTTTCGGGCTGACCCGCGCTGTCAGGGCGCGGACTCCATTCCGGGCGCATTGTTAGGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 72 bp TCAGTTCCCTGGGGACCAGGAAGGGCGACTCTTGCCTaGGAGTCAGTGCTTGGGCCGTCGGGTCCGGGTAAG +
Preference number: 6 (lower is better)
Translates to: SVPWGPGRATLA*ESVLGPSGPGK
Trigger: CTTACCCGGACCCGACGGCCCAAGCACTGACTCCCAGGCAAGAGTCGCCCTTCCTGGTCCCCAGGGAACTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 72 bp TCTGGGTCTGCTCTGCGCTGTTGCGTGCTGCGCTCCTaGGACCTGCTGACTGTCCTAGAGGGAACGTCCCGC +
Preference number: 6 (lower is better)
Translates to: SGSALRCCVLRS*DLLTVLEGTSR
Trigger: GCGGGACGTTCCCTCTAGGACAGTCAGCAGGTCCCAGGAGCGCAGCACGCAACAGCGCAGAGCAGACCCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CAA 90 bp CCTCCGGGTCTCACCCCGGGAAAAGTCTGGGTCTGCTCTGCGCTGTaGCGTGCTGCGCTCCTGGGACCTGCTGACTGTCCTAGAGGGAAC +
Preference number: 6 (lower is better)
Translates to: PPGLTPGKVWVCSAL*RAALLGPADCPRGN
Trigger: GTTCCCTCTAGGACAGTCAGCAGGTCCCAGGAGCGCAGCACGCAACAGCGCAGAGCAGACCCAGACTTTTCCCGGGGTGAGACCCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 72 bp GCGTGGTCCGGAGAGCGTGGACAAGGTAACCTGTTTTaGATGTCCGGGAGAAGGGAGTCCGGCCGAAAGGGC +
Preference number: 6 (lower is better)
Translates to: AWSGERGQGNLF*MSGRRESGRKG
Trigger: GCCCTTTCGGCCGGACTCCCTTCTCCCGGACATCCAAAACAGGTTACCTTGTCCACGCTCTCCGGACCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS CCA 72 bp GTGGCTGGGGTGTGCGGGTTTCTGGTGAGGTCCGGGTaGGAAGCCGTCTCTCCGCATTCTCCTGAAAGCTCT +
Preference number: 6 (lower is better)
Translates to: VAGVCGFLVRSG*EAVSPHSPESS
Trigger: AGAGCTTTCAGGAGAATGCGGAGAGACGGCTTCCCACCCGGACCTCACCAGAAACCCGCACACCCCAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS TCA 72 bp CTCCTGGTGGTGGAGTTGGAGTCCTTTCTGGCTGAATaGGGAGCAATGTGGCTGGGGTGTGCGGGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: LLVVELESFLAE*GAMWLGCAGFW
Trigger: CCAGAAACCCGCACACCCCAGCCACATTGCTCCTCATTCAGCCAGAAAGGACTCCAACTCCACCACCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS TCA 72 bp GAGGTCCGGGTGGGAAGCCGTCTCTCCGCATTCTCCTaGAAGCTCTGTTGTAGTTTGAAGGTCGGTAGAGCC +
Preference number: 6 (lower is better)
Translates to: EVRVGSRLSAFS*KLCCSLKVGRA
Trigger: GGCTCTACCGACCTTCAAACTACAACAGAGCTTTCAGGAGAATGCGGAGAGACGGCTTCCCACCCGGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526269.2
CDS TCA 72 bp ATATTGAATAATTCCAGTGGGGGAGGCAGCTGGTGCTaGAAGGAATTGGGGGACAGTATAGGAATGTTCGGG +
Preference number: 6 (lower is better)
Translates to: ILNNSSGGGSWC*KELGDSIGMFG
Trigger: CCCGAACATTCCTATACTGTCCCCCAATTCCTTTCAGCACCAGCTGCCTCCCCCACTGGAATTATTCAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526269.2