RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEMA6B (Homo sapiens)

Ensembl gene IDs: ENSG00000167680

Ensembl transcript IDs: ENST00000586582.6, ENST00000586965.1, ENST00000589889.1, ENST00000676793.1, ENST00000677828.1

Found 520 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGTGGCAGCCGCGGTGGCGGTCCCCAGGCCGGGCCTCGCCGCTGTTaGACGTGTGGGTGCGGCGCAGGGTGGCGGCCGGAGGGGCGTGGG +
Preference number: 1 (lower is better)
Translates to: RGSRGGGPQAGPRRC*TCGCGAGWRPEGRG
Trigger: CCCACGCCCCTCCGGCCGCCACCCTGCGCCGCACCCACACGTTCAACAGCGGCGAGGCCCGGCCTGGGGACCGCCACCGCGGCTGCCACG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR GCA 90 bp CGCTCGCCCAGGCGGCTGACGCTCAGCACCGCCTCGCCCGCCCCGTaGGCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGC +
Preference number: 1 (lower is better)
Translates to: RSPRRLTLSTASPAP*ARMASLSLRRASSR
Trigger: GCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGCGGTGCTGAGCGTCAGCCGCCTGGGCGAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR GCA 90 bp GGGTGCGGGTGCGGAGTGGGCAGGCGCTTCTGCGGCAGCGGCGTCTaGTCGGGCGTGGGCAGCAGCCCCGAGTCCAGGTCGTGGGGCCCG +
Preference number: 1 (lower is better)
Translates to: GCGCGVGRRFCGSGV*SGVGSSPESRSWGP
Trigger: CGGGCCCCACGACCTGGACTCGGGGCTGCTGCCCACGCCCGAGCAGACGCCGCTGCCGCAGAAGCGCCTGCCCACTCCGCACCCGCACCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR GCA 90 bp GCACCGCCTCGCCCGCCCCGTGCGCCAGGATGGCCTCCTTGTCCTTaGGCCGGGCCAGCTCCCGCCGCTCACGGAGGCCCACGAACCAGC +
Preference number: 1 (lower is better)
Translates to: APPRPPRAPGWPPCP*AGPAPAAHGGPRTS
Trigger: GCTGGTTCGTGGGCCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGCGGTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CCA 90 bp GCGGAGTGGGCAGGCGCTTCTGCGGCAGCGGCGTCTGCTCGGGCGTaGGCAGCAGCCCCGAGTCCAGGTCGTGGGGCCCGCCCTGCAGCA +
Preference number: 1 (lower is better)
Translates to: AEWAGASAAAASARA*AAAPSPGRGARPAA
Trigger: TGCTGCAGGGCGGGCCCCACGACCTGGACTCGGGGCTGCTGCCCACGCCCGAGCAGACGCCGCTGCCGCAGAAGCGCCTGCCCACTCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CCA 90 bp AGCGGCGTCTGCTCGGGCGTGGGCAGCAGCCCCGAGTCCAGGTCGTaGGGCCCGCCCTGCAGCAGCGTGGCCTTGGCCCAGCCGTTCTGC +
Preference number: 1 (lower is better)
Translates to: SGVCSGVGSSPESRS*GPPCSSVALAQPFC
Trigger: GCAGAACGGCTGGGCCAAGGCCACGCTGCTGCAGGGCGGGCCCCACGACCTGGACTCGGGGCTGCTGCCCACGCCCGAGCAGACGCCGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR TCA 90 bp GGGCCAGCTCCCGCCGCTCACGGAGGCCCACGAACCAGCCCACGCTaGAGCCGGACACCACGGCTCCCACCACGAAGGCCGCCACCGACG +
Preference number: 1 (lower is better)
Translates to: GPAPAAHGGPRTSPR*SRTPRLPPRRPPPT
Trigger: CGTCGGTGGCGGCCTTCGTGGTGGGAGCCGTGGTGTCCGGCTTCAGCGTGGGCTGGTTCGTGGGCCTCCGTGAGCGGCGGGAGCTGGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CCA 90 bp GCCTTCTGGAAGCCCCAGCGTCGGCTCAGCCAACGCCCAGGCCGCTaGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCG +
Preference number: 1 (lower is better)
Translates to: AFWKPQRRLSQRPGR*GHHDRRSWTHTLHA
Trigger: CGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCGTTGGCTGAGCCGACGCTGGGGCTTCCAGAAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR GCA 90 bp CAGCCTTCGCTGGCACGCACACACACGCCCACCTCCCCGGCCCCTTaGACACGAACACGGCACGCACACGCACGCACACCCACACACGCC +
Preference number: 1 (lower is better)
Translates to: QPSLARTHTPTSPAP*TRTRHAHARTPTHA
Trigger: GGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGTGTGCGTGCCAGCGAAGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR GCA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTaGACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGC +
Preference number: 1 (lower is better)
Translates to: QAAGATTIVARGHTP*TRGPLDTHAHSSLR
Trigger: GCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR CCA 90 bp CGGGCCGGGGTCGAGGCACCTGATCCTCCGGCACCGGCGTCCAGATaGACTCGGGGGACTTCTGCTCTCGGAAGCGGCCTTCAAACACAG +
Preference number: 1 (lower is better)
Translates to: RAGVEAPDPPAPASR*TRGTSALGSGLQTQ
Trigger: CTGTGTTTGAAGGCCGCTTCCGAGAGCAGAAGTCCCCCGAGTCCATCTGGACGCCGGTGCCGGAGGATCAGGTGCCTCGACCCCGGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CCA 90 bp CGAGTCAGCTGGTGCCTCATCAGGGTCCGCAGGATCCAGGGCGCATaGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGGTGGGTCTTG +
Preference number: 1 (lower is better)
Translates to: RVSWCLIRVRRIQGA*PSEGTASSIRGWVL
Trigger: CAAGACCCACCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGCGGACCCTGATGAGGCACCAGCTGACTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR GCA 90 bp ACAAAGTTGAGGATGTCATCCGGCAAGGCGCTGGAGGCATTGTACTaGATCCCGGGGGCTGCGCAGCACCCGGGCCGGGGTCGAGGCACC +
Preference number: 1 (lower is better)
Translates to: TKLRMSSGKALEALY*IPGAAQHPGRGRGT
Trigger: GGTGCCTCGACCCCGGCCCGGGTGCTGCGCAGCCCCCGGGATGCAGTACAATGCCTCCAGCGCCTTGCCGGATGACATCCTCAACTTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR GCA 90 bp AGCTGCTGCCGATGTGACTTCCGGGCAGGCCCTCCTCGTGTCTCCTaGCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGAGTGGG +
Preference number: 1 (lower is better)
Translates to: SCCRCDFRAGPPRVS*LKPRHCPRFPLQSG
Trigger: CCCACTCTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGGCCTGCCCGGAAGTCACATCGGCAGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR TCA 90 bp GCCCAGACGTCCCTGAGGTGCTGGCATTGGGCCGGACGAGGAACTTaGGGACCGTCCCCGCCTCAGAACCCAGGAAGACAACGGTCTGGT +
Preference number: 1 (lower is better)
Translates to: AQTSLRCWHWAGRGT*GPSPPQNPGRQRSG
Trigger: ACCAGACCGTTGTCTTCCTGGGTTCTGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGCCCAATGCCAGCACCTCAGGGACGTCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR TCA 90 bp GTAGGTCTCAAACTCCTCCAGGAAGACACTGAGCCCAGACGTCCCTaGGGTGCTGGCATTGGGCCGGACGAGGAACTTGAGGACCGTCCC +
Preference number: 1 (lower is better)
Translates to: VGLKLLQEDTEPRRP*GAGIGPDEELEDRP
Trigger: GGGACGGTCCTCAAGTTCCTCGTCCGGCCCAATGCCAGCACCTCAGGGACGTCTGGGCTCAGTGTCTTCCTGGAGGAGTTTGAGACCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CAA 90 bp GCGTGGCAGCCGCGGTGGCGGTCCCCAGGCCGGGCCTCGCCGCTGTaGAACGTGTGGGTGCGGCGCAGGGTGGCGGCCGGAGGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: AWQPRWRSPGRASPL*NVWVRRRVAAGGAW
Trigger: CCACGCCCCTCCGGCCGCCACCCTGCGCCGCACCCACACGTTCAACAGCGGCGAGGCCCGGCCTGGGGACCGCCACCGCGGCTGCCACGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CAA 90 bp ACGCTCAGCACCGCCTCGCCCGCCCCGTGCGCCAGGATGGCCTCCTaGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGCCCACG +
Preference number: 2 (lower is better)
Translates to: TLSTASPAPCARMAS*SLRRASSRRSRRPT
Trigger: CGTGGGCCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGCGGTGCTGAGCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CAA 90 bp AGCACCGCCTCGCCCGCCCCGTGCGCCAGGATGGCCTCCTTGTCCTaGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGCCCACGAACCAG +
Preference number: 2 (lower is better)
Translates to: STASPAPCARMASLS*RRASSRRSRRPTNQ
Trigger: CTGGTTCGTGGGCCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGCGGTGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR TCA 90 bp CCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGCACGGGCCTCGCCGCTGTTaGACGTGTGGGTGCGGCGCA +
Preference number: 2 (lower is better)
Translates to: PGPGVLAPSLAPGSRGWHGPRRC*TCGCGA
Trigger: TGCGCCGCACCCACACGTTCAACAGCGGCGAGGCCC...GTGCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp CACCGCCTCGCCCGCCCCGTGCGCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCAGACAACGGTCTGGTTaGCCCAGGGGCCGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: HRLARPVRQDGLLVLAPGRQRSG*PRGRLP
Trigger: TGGGAGCCGGCCCCTGGGGCAACCAGACCGTTGTCT...GCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGCGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR TCA 90 bp CCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGCACCAGCTGCTGCCGATGTaGCTTCCGGGCAGGCCCTCC +
Preference number: 2 (lower is better)
Translates to: PGPGVLAPSLAPGSRGWHQLLPM*LPGRPS
Trigger: GGAGGGCCTGCCCGGAAGTCACATCGGCAGCAGCTG...GTGCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR TCA 90 bp ACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACACGGGGTCGAGGCACCTaGTCCTCCGGCACCGGCGTC +
Preference number: 2 (lower is better)
Translates to: TPTSPAPCTRTRHAHARTRGRGT*SSGTGV
Trigger: GACGCCGGTGCCGGAGGATCAGGTGCCTCGACCCCG...TGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp GGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGGCACCCACTCGGAGTTaGCCCGGGCCCCGGCGTTCT +
Preference number: 2 (lower is better)
Translates to: GRWGHHDRRSWTHTLHAWAPTRS*PGPRRS
Trigger: AGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGC...CCACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp CGGAGGCCCACGAACCAGCCCACGCTGAAGCCGGACACCACGGCTCCCACCACGGCACCCACTCGGAGTTaGCCCGGGCCCCGGCGTTCT +
Preference number: 2 (lower is better)
Translates to: RRPTNQPTLKPDTTAPTTAPTRS*PGPRRS
Trigger: AGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGC...CGTGGTGGGAGCCGTGGTGTCCGGCTTCAGCGTGGGCTGGTTCGTGGGCCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp CACCGCCTCGCCCGCCCCGTGCGCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCCCGCAGGAGTCCTGTaGAGTCCCCTAAGCCTGAGG +
Preference number: 2 (lower is better)
Translates to: HRLARPVRQDGLLVLAPGPAGVL*SPLSLR
Trigger: CCTCAGGCTTAGGGGACTGCACAGGACTCCTGCGGG...GCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGCGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGGACCCCCGGGCCTTCTaGAAGCCCCAGCGTCGGCTC +
Preference number: 2 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRDPRAF*KPQRRL
Trigger: GAGCCGACGCTGGGGCTTCCAGAAGGCCCGGGGGTC...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR TCA 90 bp AGGCGCTTCTGCGGCAGCGGCGTCTGCTCGGGCGTGGGCAGCAGCCCCGAGTCCCTCGTGTCTCCTGCCTaGAACCCCGGCATTGTCCCC +
Preference number: 2 (lower is better)
Translates to: RRFCGSGVCSGVGSSPESLVSPA*NPGIVP
Trigger: GGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAG...GGACTCGGGGCTGCTGCCCACGCCCGAGCAGACGCCGCTGCCGCAGAAGCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp CACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTTGGGGAGCGTCCAAGCCTCCCCTaGCTGCCGCCACCCCGAGAA +
Preference number: 2 (lower is better)
Translates to: HGTHTHAHPHTPGAWVGERPSLP*LPPPRE
Trigger: TTCTCGGGGTGGCGGCAGGCAGGGGAGGCTTGGACG...CTCCCCAACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTCGGGCCCCGGCGTTCTaGCACCGTCTCTCGCTCCTG +
Preference number: 2 (lower is better)
Translates to: QAAGATTIVARGHTPCTRRAPAF*HRLSLL
Trigger: CAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCG...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGCGGGCCCCGGCGTTCTaGCACCGTCTCTCGCTCCTG +
Preference number: 2 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGRAPAF*HRLSLL
Trigger: CAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCG...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR CAA 90 bp GCAGCCTTCGCTGGCACGCACACACACGCCCACCTCCCCGGCCCCTaGCACACGAACACGGCACGCACACGCACGCACACCCACACACGC +
Preference number: 2 (lower is better)
Translates to: AAFAGTHTHAHLPGP*HTNTARTRTHTHTR
Trigger: GCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGTGTGCGTGCCAGCGAAGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGCAAGCCTCCCCTGCCTaGCGCCACCCCGAGAACGGA +
Preference number: 2 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGQASPA*RHPENG
Trigger: TCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTTG...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTCAAGCCTCCCCTGCCTaGCGCCACCCCGAGAACGGA +
Preference number: 2 (lower is better)
Translates to: QAAGATTIVARGHTPCTRQASPA*RHPENG
Trigger: TCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTTG...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp GCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGGTCAAGCCTCCCCTGCCTaGCGCCACCCCGAGAACGGA +
Preference number: 2 (lower is better)
Translates to: AGSRAHGPARAPPRPSEGQASPA*RHPENG
Trigger: TCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTTG...ACCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCGTCCAAGCCTCCCCTaGCTGCCGCCACCCCGAGAA +
Preference number: 2 (lower is better)
Translates to: THAHLPGPLHTNTARTRTRPSLP*LPPPRE
Trigger: TTCTCGGGGTGGCGGCAGGCAGGGGAGGCTTGGACG...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp ACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTGTGGGCAGGCGCTTCTaGGGCAGCGGCGTCTGCTCG +
Preference number: 2 (lower is better)
Translates to: TRTRHAHARTPTHARGLGVGRRF*GSGVCS
Trigger: CGAGCAGACGCCGCTGCCGCAGAAGCGCCTGCCCAC...ACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CCA 90 bp TGCTGGCAGCGAGCCACAGGCACTCGGACCACGCAGCGGGGGAAGGCAGCCAGCCCTGGTTCCCGTGGCTaGCACTGCCAAGGCATCGGG +
Preference number: 2 (lower is better)
Translates to: CWQRATGTRTTQRGKAASPGSRG*HCQGIG
Trigger: CCCGATGCCTTGGCAGTGCCAGCCACGGGAACCAGG...GCTGGCTGCCTTCCCCCGCTGCGTGGTCCGAGTGCCTGTGGCTCGCTGCCAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CCA 90 bp GCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGCACGATCGTCGCTCGTaGACACACACCCTGCACGCG +
Preference number: 2 (lower is better)
Translates to: ARMASLSLRRASSRRSRRHDRRS*THTLHA
Trigger: CGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTG...CCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR TCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACCGAACCAGCCCACGCTaGAGCCGGACACCACGGCTC +
Preference number: 2 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHRTSPR*SRTPRL
Trigger: GAGCCGTGGTGTCCGGCTTCAGCGTGGGCTGGTTCG...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp GCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGAGGGCGAGCTGGTTGTaGTTCCTTGTGGCGGAGGGG +
Preference number: 2 (lower is better)
Translates to: AQAAGATTIVARGHTPCTRASWL*FLVAEG
Trigger: CCCCTCCGCCACAAGGAAGCACAACCAGCTCGCCCT...CGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp CACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAGGGCGAGCTGGTTGTaGTTCCTTGTGGCGGAGGGG +
Preference number: 2 (lower is better)
Translates to: HAHLPGPLHTNTARTRTHRASWL*FLVAEG
Trigger: CCCCTCCGCCACAAGGAAGCACAACCAGCTCGCCCT...GTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGCGTGGACACACACCCTaGACGCGTGGCCCACTTGAC +
Preference number: 2 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRRGHTP*TRGPLD
Trigger: GTCAAGTGGGCCACGCGTGCAGGGTGTGTGTCCACG...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp CCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGCACGCCAGCCACGTGGCATaGATGGTCAGCTGGAGGTCA +
Preference number: 2 (lower is better)
Translates to: PGPGVLAPSLAPGSRGWHASHVA*MVSWRS
Trigger: TGACCTCCAGCTGACCATGCATGCCACGTGGCTGGC...GTGCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp GCAGCAGCGTGGCCTTGGCCCAGCCGTTCTGCATCAGGGGCGCCAGCAGGGCCTAGGAAGGACGTCCACTaGTTCTCCAGCACGCGGGGG +
Preference number: 2 (lower is better)
Translates to: AAAWPWPSRSASGAPAGPRKDVH*FSSTRG
Trigger: CCCCCGCGTGCTGGAGAAGCAGTGGACGTCCTTCCT...AGGCCCTGCTGGCGCCCCTGATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp GACTTGAGCACCCACTCGGAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCGCCCCGGACACGTCCTaGTCAAAGGCGGCTCTGGTG +
Preference number: 2 (lower is better)
Translates to: DLSTHSELPRAPAFWHRLAPDTS*SKAALV
Trigger: CACCAGAGCCGCCTTTGAGCAGGACGTGTCCGGGGC...GAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCTCAAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CCA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGCCTGGTTCCCGTGGCTaGCACTGCCAAGGCATCGGG +
Preference number: 2 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVPGSRG*HCQGIG
Trigger: CCCGATGCCTTGGCAGTGCCAGCCACGGGAACCAGG...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp GGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGCGCTCCTGGTTCCCGTaGCTGGCACTGCCAAGGCAT +
Preference number: 2 (lower is better)
Translates to: GRWGHHDRRSWTHTLHAWRSWFP*LALPRH
Trigger: ATGCCTTGGCAGTGCCAGCCACGGGAACCAGGAGCG...CCACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp CACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACACCGTCTCTCGCTCCTaGTTCCCGTGGCTGGCACTG +
Preference number: 2 (lower is better)
Translates to: HAHLPGPLHTNTARTRTHTVSRS*FPWLAL
Trigger: CAGTGCCAGCCACGGGAACCAGGAGCGAGAGACGGT...GTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGCGGGCCCCGGCGTTCTaGCACCGTCTCTCGCTCCTG +
Preference number: 2 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGRAPAF*HRLSLL
Trigger: CAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCG...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp CTCCCGCCGCTCACGGAGGCCCACGAACCAGCCCACGCTGAAGCCGGACACCACCACAGCAGCCTTCGCTaGCACGCACACACACGCCCA +
Preference number: 2 (lower is better)
Translates to: LPPLTEAHEPAHAEAGHHHSSLR*HAHTRP
Trigger: TGGGCGTGTGTGTGCGTGCCAGCGAAGGCTGCTGTG...GTGGTGTCCGGCTTCAGCGTGGGCTGGTTCGTGGGCCTCCGTGAGCGGCGGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CCA 90 bp CCTGCAGCAGCGTGGCCTTGGCCCAGCCGTTCTGCATCAGGGGCGCCAGCAGGGCTAAGCCTGAGGTGCTaGCCCCGGACACGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: PAAAWPWPSRSASGAPAGLSLRC*PRTRPA
Trigger: AGCAGGACGTGTCCGGGGCCAGCACCTCAGGCTTAG...CCCTGCTGGCGCCCCTGATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGGCAGCAGCGTGGCCTTaGCCCAGCCGTTCTGCATCA +
Preference number: 2 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRAAAWP*PSRSAS
Trigger: TGATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGC...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp GCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGCCTCCTCGTGTCTCCTaGCTGAAACCCCGGCATTGT +
Preference number: 2 (lower is better)
Translates to: ARMASLSLRRASSRRSRRPPRVS*LKPRHC
Trigger: ACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG...CCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCTGGAGGCATTGTACTaGATCCCGGGGGCTGCGCAG +
Preference number: 2 (lower is better)
Translates to: THAHLPGPLHTNTARTRTLEALY*IPGAAQ
Trigger: CTGCGCAGCCCCCGGGATGCAGTACAATGCCTCCAG...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp GGAGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTAAAGCTCAGCAGCCGCTaGCCTGTCTCGCCACCGCCG +
Preference number: 2 (lower is better)
Translates to: GGHKGTGGMGLSHHPGAVKLSSR*PVSPPP
Trigger: CGGCGGTGGCGAGACAGGGCAGCGGCTGCTGAGCTT...TACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTCGTGGGGCCCGCCCTaGAGCAGCGTGGCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRISWGPP*SSVALA
Trigger: GGCCAAGGCCACGCTGCTGCAGGGCGGGCCCCACGA...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CCA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGCGCTCCTGGTTCCCGTaGCTGGCACTGCCAAGGCAT +
Preference number: 2 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVRSWFP*LALPRH
Trigger: ATGCCTTGGCAGTGCCAGCCACGGGAACCAGGAGCG...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp ACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAACCGTCTCTCGCTCCTaGTTCCCGTGGCTGGCACTG +
Preference number: 2 (lower is better)
Translates to: TPTSPAPCTRTRHAHARTTVSRS*FPWLAL
Trigger: CAGTGCCAGCCACGGGAACCAGGAGCGAGAGACGGT...TGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTAGGGGGAGGGCGAGCTaGTTGTGCTTCCTTGTGGCG +
Preference number: 2 (lower is better)
Translates to: QAAGATTIVARGHTPCTRRGRAS*LCFLVA
Trigger: CGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCT...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGAGGGGGAGGGCGAGCTaGTTGTGCTTCCTTGTGGCG +
Preference number: 2 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVRGRAS*LCFLVA
Trigger: CGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCT...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGAGGGGACGGGTGGCATaGGACTCTCTCACCACCCTG +
Preference number: 2 (lower is better)
Translates to: THAHLPGPLHTNTARTRTRGRVA*DSLTTL
Trigger: CAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCT...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp GACTTGAGCACCCACTCGGAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCAGGGGACGGGTGGCATaGGACTCTCTCACCACCCTG +
Preference number: 2 (lower is better)
Translates to: DLSTHSELPRAPAFWHRLRGRVA*DSLTTL
Trigger: CAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCT...GAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCTCAAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp CCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACACCCAGCACCGGCGTCCAGATaGACTCGGGGGACTTCTGCT +
Preference number: 2 (lower is better)
Translates to: PPPRPLAHEHGTHTHAHPAPASR*TRGTSA
Trigger: AGCAGAAGTCCCCCGAGTCCATCTGGACGCCGGTGC...TGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CCA 90 bp GCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGCATCCGGCAAGGCGCTaGAGGCATTGTACTGCATCC +
Preference number: 2 (lower is better)
Translates to: ARMASLSLRRASSRRSRRHPARR*RHCTAS
Trigger: GGATGCAGTACAATGCCTCCAGCGCCTTGCCGGATG...CCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR TCA 90 bp GGAGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTACACGCGTGGCCCACTTaGCACACACGCCCACAGCAG +
Preference number: 2 (lower is better)
Translates to: GGHKGTGGMGLSHHPGAVHAWPT*HTRPQQ
Trigger: CTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTG...TACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR TCA 90 bp ACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTCCTCCAGGAAGACACTaGGCCCAGACGTCCCTGAGG +
Preference number: 2 (lower is better)
Translates to: TRTRHAHARTPTHARGLGPPGRH*AQTSLR
Trigger: CCTCAGGGACGTCTGGGCTCAGTGTCTTCCTGGAGG...ACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTGCACCCACTCGGAGTTaGCCCGGGCCCCGGCGTTCT +
Preference number: 2 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIAPTRS*PGPRRS
Trigger: AGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGC...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGACCTCCCCGGCCCCTTaGACACGAACACGGCACGCA +
Preference number: 2 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGTSPAP*TRTRHA
Trigger: TGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGT...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACCGTGGACACACACCCTaGACGCGTGGCCCACTTGAC +
Preference number: 2 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHRGHTP*TRGPLD
Trigger: GTCAAGTGGGCCACGCGTGCAGGGTGTGTGTCCACG...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp CCACCGACGACGTTACCAGCAGGTTCACCGACACCAGCCCCGCGCGGTCCTCGGGCCAGCCACGTGGCATaGATGGTCAGCTGGAGGTCA +
Preference number: 2 (lower is better)
Translates to: PPTTLPAGSPTPAPRGPRASHVA*MVSWRS
Trigger: TGACCTCCAGCTGACCATGCATGCCACGTGGCTGGC...CCGAGGACCGCGCGGGGCTGGTGTCGGTGAACCTGCTGGTAACGTCGTCGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGCAGCCGAGCCAGGGATaGTGTTGCTGGGCGTGGAAA +
Preference number: 2 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVQPSQG*CCWAWK
Trigger: TTTCCACGCCCAGCAACAGCATCCCTGGCTCGGCTG...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGCCCCTAAGCCTGAGGTaGTGGCCCCGGACACGTCCT +
Preference number: 2 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGPLSLR*WPRTRP
Trigger: AGGACGTGTCCGGGGCCAGCACCTCAGGCTTAGGGG...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CCA 90 bp GACGACGTTACCAGCAGGTTCACCGACACCAGCCCCGCGCGGTCCTCGGAGAGGACCGTCTCTCGCTCCTaGTTCCCGTGGCTGGCACTG +
Preference number: 2 (lower is better)
Translates to: DDVTSRFTDTSPARSSERTVSRS*FPWLAL
Trigger: CAGTGCCAGCCACGGGAACCAGGAGCGAGAGACGGT...CCTCTCCGAGGACCGCGCGGGGCTGGTGTCGGTGAACCTGCTGGTAACGTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACAGGGGGAGGGCGAGCTaGTTGTGCTTCCTTGTGGCG +
Preference number: 2 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHRGRAS*LCFLVA
Trigger: CGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCT...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp ACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTCACAGCAGCCTTCGCTaGCACGCACACACACGCCCA +
Preference number: 2 (lower is better)
Translates to: TRTRHAHARTPTHARGLGHSSLR*HAHTRP
Trigger: TGGGCGTGTGTGTGCGTGCCAGCGAAGGCTGCTGTG...ACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACCACGATCGTCGCTCGTaGACACACACCCTGCACGCG +
Preference number: 2 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHHDRRS*THTLHA
Trigger: CGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTG...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp GCAGCAGCGTGGCCTTGGCCCAGCCGTTCTGCATCAGGGGCGCCAGCAGGGCCTTCACAAGGGGACGGGTaGCATGGGACTCTCTCACCA +
Preference number: 2 (lower is better)
Translates to: AAAWPWPSRSASGAPAGPSQGDG*HGTLSP
Trigger: TGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGA...AGGCCCTGCTGGCGCCCCTGATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CCA 90 bp GACGACGTTACCAGCAGGTTCACCGACACCAGCCCCGCGCGGTCCTCGGAGAGGGCCACTCGAGTCAGCTaGTGCCTCATCAGGGTCCGC +
Preference number: 2 (lower is better)
Translates to: DDVTSRFTDTSPARSSERATRVS*CLIRVR
Trigger: GCGGACCCTGATGAGGCACCAGCTGACTCGAGTGGC...CCTCTCCGAGGACCGCGCGGGGCTGGTGTCGGTGAACCTGCTGGTAACGTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp ACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTGCCAGCCACGTGGCATaGATGGTCAGCTGGAGGTCA +
Preference number: 2 (lower is better)
Translates to: TRTRHAHARTPTHARGLGASHVA*MVSWRS
Trigger: TGACCTCCAGCTGACCATGCATGCCACGTGGCTGGC...ACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp GGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGGTGGGTCTTGACAGACTCGGGGGACTTCTaGTCTCGGAAGCGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: GAWPSEGTASSIRGWVLTDSGDF*SRKRPS
Trigger: TGAAGGCCGCTTCCGAGAGCAGAAGTCCCCCGAGTC...TGTCAAGACCCACCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CCA 90 bp AGGGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGCCTGGTTCCCGTGGCTaGCACTGCCAAGGCATCGGG +
Preference number: 2 (lower is better)
Translates to: RAEDPASHVACMVSWRSEPGSRG*HCQGIG
Trigger: CCCGATGCCTTGGCAGTGCCAGCCACGGGAACCAGG...CTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp GACGACGTTACCAGCAGGTTCACCGACACCAGCCCCGCGCGGTCCTCGGAGAGGACCCAGCCAGCCACGTaGCATGCATGGTCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: DDVTSRFTDTSPARSSERTQPAT*HAWSAG
Trigger: TCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGT...CCTCTCCGAGGACCGCGCGGGGCTGGTGTCGGTGAACCTGCTGGTAACGTCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CAA 90 bp GTCTTGACAAAGTTGAGGATGTCATCCGGCAAGGCGCTGGAGGCATaGTACTGCATCCCGGGGGCTGCGCAGCACCCGGGCCGGGGTCGA +
Preference number: 2 (lower is better)
Translates to: VLTKLRMSSGKALEA*YCIPGAAQHPGRGR
Trigger: TCGACCCCGGCCCGGGTGCTGCGCAGCCCCCGGGATGCAGTACAATGCCTCCAGCGCCTTGCCGGATGACATCCTCAACTTTGTCAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CAA 90 bp AGCCCAGACGTCCCTGAGGTGCTGGCATTGGGCCGGACGAGGAACTaGAGGACCGTCCCCGCCTCAGAACCCAGGAAGACAACGGTCTGG +
Preference number: 2 (lower is better)
Translates to: SPDVPEVLALGRTRN*RTVPASEPRKTTVW
Trigger: CCAGACCGTTGTCTTCCTGGGTTCTGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGCCCAATGCCAGCACCTCAGGGACGTCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CAA 90 bp TCCTCCAGGAAGACACTGAGCCCAGACGTCCCTGAGGTGCTGGCATaGGGCCGGACGAGGAACTTGAGGACCGTCCCCGCCTCAGAACCC +
Preference number: 2 (lower is better)
Translates to: SSRKTLSPDVPEVLA*GRTRNLRTVPASEP
Trigger: GGGTTCTGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGCCCAATGCCAGCACCTCAGGGACGTCTGGGCTCAGTGTCTTCCTGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR TCA 90 bp AAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTACAGAGCAGCTGCTGCCGATGTaGCTTCCGGGCAGGCCCTCC +
Preference number: 2 (lower is better)
Translates to: KGTGGMGLSHHPGAVFTEQLLPM*LPGRPS
Trigger: GGAGGGCCTGCCCGGAAGTCACATCGGCAGCAGCTG...CTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR TCA 90 bp CCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGCACCACCAGGTGTATCTaGCTTCCAACTCAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: PGWPPCPCAGPAPAAHGGTTRCI*LPTQVP
Trigger: AGGGACTTGAGTTGGAAGTCAGATACACCTGGTGGT...GCCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR TCA 90 bp CACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTTGGGGAGCAGCCTGCAGCACGTTaGAGTAGAAATGGGAGTCTC +
Preference number: 2 (lower is better)
Translates to: HGTHTHAHPHTPGAWVGEQPAAR*SRNGSL
Trigger: GAGACTCCCATTTCTACTTCAACGTGCTGCAGGCTG...CTCCCCAACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp ACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTCCTCCTCGTGTCTCCTaGCTGAAACCCCGGCATTGT +
Preference number: 2 (lower is better)
Translates to: TRTRHAHARTPTHARGLGPPRVS*LKPRHC
Trigger: ACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG...ACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAACGTCCAAGCCTCCCCTaGCTGCCGCCACCCCGAGAA +
Preference number: 2 (lower is better)
Translates to: KPPLPAATPRTELCNWLERPSLP*LPPPRE
Trigger: TTCTCGGGGTGGCGGCAGGCAGGGGAGGCTTGGACG...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTCACGATCGTCGCTCGTaGACACACACCCTGCACGCG +
Preference number: 2 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIHDRRS*THTLHA
Trigger: CGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTG...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp TGCTGGCAGCGAGCCACAGGCACTCGGACCACGCAGCGGGGGAAGGCAGCCAGCCCGAGAACGGAGTTGTaGAATTGGTTAGAAAACCGC +
Preference number: 2 (lower is better)
Translates to: CWQRATGTRTTQRGKAASPRTEL*NWLENR
Trigger: GCGGTTTTCTAACCAATTGCACAACTCCGTTCTCGG...GCTGGCTGCCTTCCCCCGCTGCGTGGTCCGAGTGCCTGTGGCTCGCTGCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp AAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTACAGAGCGTGGACACACACCCTaGACGCGTGGCCCACTTGAC +
Preference number: 2 (lower is better)
Translates to: KGTGGMGLSHHPGAVFTERGHTP*TRGPLD
Trigger: GTCAAGTGGGCCACGCGTGCAGGGTGTGTGTCCACG...CTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGGCCTTCAAACACAGCTaGCACCTGTGTCAGGTCAAA +
Preference number: 2 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGAFKHS*HLCQVK
Trigger: TTTGACCTGACACAGGTGGCAGCTGTGTTTGAAGGC...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTATACACCCCGAGTACTaGTGGCAGCGAGCCACAGGC +
Preference number: 2 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIIHPEY*WQRATG
Trigger: GCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTGTAT...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGAGTAGGGGTCCTGACTaGCGATACAGTTCTTCATAC +
Preference number: 2 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRSRGPD*RYSSSY
Trigger: GTATGAAGAACTGTATCGGCAGTCAGGACCCCTACT...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CCA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGACTCTCTCACCACCCTaGGGCCGTATTTACAGAGGG +
Preference number: 2 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGTLSPP*GRIYRG
Trigger: CCCTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGT...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp GACTTGAGCACCCACTCGGAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCCCGAGAACGGAGTTGTaGAATTGGTTAGAAAACCGC +
Preference number: 2 (lower is better)
Translates to: DLSTHSELPRAPAFWHRLPRTEL*NWLENR
Trigger: GCGGTTTTCTAACCAATTGCACAACTCCGTTCTCGG...GAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCTCAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR GCA 90 bp AAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTACAGAGCCTCCTCGTGTCTCCTaGCTGAAACCCCGGCATTGT +
Preference number: 2 (lower is better)
Translates to: KGTGGMGLSHHPGAVFTEPPRVS*LKPRHC
Trigger: ACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG...CTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAAACCCAGCCAGCCACGTaGCATGCATGGTCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: KPPLPAATPRTELCNWLETQPAT*HAWSAG
Trigger: TCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGT...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR CAA 90 bp AGCGAGGGCACCGCCTCGTCCATCAGAGGGTGGGTCTTGACAAAGTaGAGGATGTCATCCGGCAAGGCGCTGGAGGCATTGTACTGCATC +
Preference number: 2 (lower is better)
Translates to: SEGTASSIRGWVLTK*RMSSGKALEALYCI
Trigger: GATGCAGTACAATGCCTCCAGCGCCTTGCCGGATGACATCCTCAACTTTGTCAAGACCCACCCTCTGATGGACGAGGCGGTGCCCTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR GCA 90 bp AGGGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGCCGAGAACGGAGTTGTaGAATTGGTTAGAAAACCGC +
Preference number: 2 (lower is better)
Translates to: RAEDPASHVACMVSWRSEPRTEL*NWLENR
Trigger: GCGGTTTTCTAACCAATTGCACAACTCCGTTCTCGG...CTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR CCA 72 bp CGCTCAGCACCGCCTCGCCCGCCCCGTGCGCCAGGATaGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCC +
Preference number: 3 (lower is better)
Translates to: RSAPPRPPRAPG*PPCPCAGPAPA
Trigger: GGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGCGGTGCTGAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CCA 72 bp GCAGGCGCTTCTGCGGCAGCGGCGTCTGCTCGGGCGTaGGCAGCAGCCCCGAGTCCAGGTCGTGGGGCCCGC +
Preference number: 3 (lower is better)
Translates to: AGASAAAASARA*AAAPSPGRGAR
Trigger: GCGGGCCCCACGACCTGGACTCGGGGCTGCTGCCCACGCCCGAGCAGACGCCGCTGCCGCAGAAGCGCCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR GCA 72 bp AGGCGGCTGACGCTCAGCACCGCCTCGCCCGCCCCGTaGGCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCC +
Preference number: 3 (lower is better)
Translates to: RRLTLSTASPAP*ARMASLSLRRA
Trigger: GGCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGCGGTGCTGAGCGTCAGCCGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CCA 72 bp TGCTCGGGCGTGGGCAGCAGCCCCGAGTCCAGGTCGTaGGGCCCGCCCTGCAGCAGCGTGGCCTTGGCCCAG +
Preference number: 3 (lower is better)
Translates to: CSGVGSSPESRS*GPPCSSVALAQ
Trigger: CTGGGCCAAGGCCACGCTGCTGCAGGGCGGGCCCCACGACCTGGACTCGGGGCTGCTGCCCACGCCCGAGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR GCA 72 bp CCGCCCTGCAGCAGCGTGGCCTTGGCCCAGCCGTTCTaGATCAGGGGCGCCAGCAGGGCCTCCGGGGGAACC +
Preference number: 3 (lower is better)
Translates to: PPCSSVALAQPF*IRGASRASGGT
Trigger: GGTTCCCCCGGAGGCCCTGCTGGCGCCCCTGATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGCAGGGCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR GCA 72 bp TGCGGAGTGGGCAGGCGCTTCTGCGGCAGCGGCGTCTaGTCGGGCGTGGGCAGCAGCCCCGAGTCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: CGVGRRFCGSGV*SGVGSSPESRS
Trigger: CGACCTGGACTCGGGGCTGCTGCCCACGCCCGAGCAGACGCCGCTGCCGCAGAAGCGCCTGCCCACTCCGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR TCA 72 bp CCCGCCGCTCACGGAGGCCCACGAACCAGCCCACGCTaGAGCCGGACACCACGGCTCCCACCACGAAGGCCG +
Preference number: 3 (lower is better)
Translates to: PAAHGGPRTSPR*SRTPRLPPRRP
Trigger: CGGCCTTCGTGGTGGGAGCCGTGGTGTCCGGCTTCAGCGTGGGCTGGTTCGTGGGCCTCCGTGAGCGGCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CCA 72 bp CCGAGTCCAGGTCGTGGGGCCCGCCCTGCAGCAGCGTaGCCTTGGCCCAGCCGTTCTGCATCAGGGGCGCCA +
Preference number: 3 (lower is better)
Translates to: PSPGRGARPAAA*PWPSRSASGAP
Trigger: TGGCGCCCCTGATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGCAGGGCGGGCCCCACGACCTGGACTCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CAA 90 bp GGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGCACCTCCCCGGCCCCTaGCACACGAACACGGCACGC +
Preference number: 3 (lower is better)
Translates to: GRWGHHDRRSWTHTLHAWHLPGP*HTNTAR
Trigger: GCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTG...CCACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR CCA 72 bp AGCACCCACTCGGAGTTGCCCCGGGCCCCGGCGTTCTaGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: STHSELPRAPAF*HRLSLLVPVAG
Trigger: GCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CAA 90 bp ACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTAGCACCCACTCGGAGTaGCCCCGGGCCCCGGCGTTC +
Preference number: 3 (lower is better)
Translates to: TRTRHAHARTPTHARGLGSTHSE*PRAPAF
Trigger: GAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCT...ACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CAA 90 bp CCGCCTCAGAACCCAGGAAGACAACGGTCTGGTTGCCCCAGGGGCCGGCTCCCAAGCACCCACTCGGAGTaGCCCCGGGCCCCGGCGTTC +
Preference number: 3 (lower is better)
Translates to: PPQNPGRQRSGCPRGRLPSTHSE*PRAPAF
Trigger: GAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCT...TGGGAGCCGGCCCCTGGGGCAACCAGACCGTTGTCTTCCTGGGTTCTGAGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CAA 90 bp GACTTGAGCACCCACTCGGAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCCACCTCCCCGGCCCCTaGCACACGAACACGGCACGC +
Preference number: 3 (lower is better)
Translates to: DLSTHSELPRAPAFWHRLHLPGP*HTNTAR
Trigger: GCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTG...GAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCTCAAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CAA 90 bp CCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGCACTGCAGCAGCGTGGCCTaGGCCCAGCCGTTCTGCATC +
Preference number: 3 (lower is better)
Translates to: PGPGVLAPSLAPGSRGWHCSSVA*AQPFCI
Trigger: GATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGCA...GTGCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR GCA 72 bp CAAGGCGCTGGAGGCATTGTACTGCATCCCGGGGGCTaGGCAGCACCCGGGCCGGGGTCGAGGCACCTGATC +
Preference number: 3 (lower is better)
Translates to: QGAGGIVLHPGG*AAPGPGSRHLI
Trigger: GATCAGGTGCCTCGACCCCGGCCCGGGTGCTGCGCAGCCCCCGGGATGCAGTACAATGCCTCCAGCGCCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CCA 72 bp ACTCCTAACCGGCACCTCGGAGACCCCCGGGCCTTCTaGAAGCCCCAGCGTCGGCTCAGCCAACGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: TPNRHLGDPRAF*KPQRRLSQRPG
Trigger: GCCTGGGCGTTGGCTGAGCCGACGCTGGGGCTTCCAGAAGGCCCGGGGGTCTCCGAGGTGCCGGTTAGGAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CAA 90 bp GCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGCCTGAGGTGCTGGCATaGGGCCGGACGAGGAACTTG +
Preference number: 3 (lower is better)
Translates to: ARMASLSLRRASSRRSRRPEVLA*GRTRNL
Trigger: CAAGTTCCTCGTCCGGCCCAATGCCAGCACCTCAGG...CCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CAA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGGGGAGGGCGAGCTGGTaGTGCTTCCTTGTGGCGGAG +
Preference number: 3 (lower is better)
Translates to: THAHLPGPLHTNTARTRTGRASW*CFLVAE
Trigger: CTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCC...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CAA 90 bp GACTTGAGCACCCACTCGGAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCGCACGCGTGGCCCACTaGACACACACGCCCACAGCA +
Preference number: 3 (lower is better)
Translates to: DLSTHSELPRAPAFWHRLARVAH*THTPTA
Trigger: TGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGC...GAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCTCAAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CAA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCAAGGCGCTGGAGGCATaGTACTGCATCCCGGGGGCT +
Preference number: 3 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARKALEA*YCIPGA
Trigger: AGCCCCCGGGATGCAGTACAATGCCTCCAGCGCCTT...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR GCA 72 bp AGGATGTCATCCGGCAAGGCGCTGGAGGCATTGTACTaGATCCCGGGGGCTGCGCAGCACCCGGGCCGGGGT +
Preference number: 3 (lower is better)
Translates to: RMSSGKALEALY*IPGAAQHPGRG
Trigger: ACCCCGGCCCGGGTGCTGCGCAGCCCCCGGGATGCAGTACAATGCCTCCAGCGCCTTGCCGGATGACATCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CCA 72 bp TGGTGCCTCATCAGGGTCCGCAGGATCCAGGGCGCATaGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGG +
Preference number: 3 (lower is better)
Translates to: WCLIRVRRIQGA*PSEGTASSIRG
Trigger: CCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGCGGACCCTGATGAGGCACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CAA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTAGCACCCACTCGGAGTaGCCCCGGGCCCCGGCGTTC +
Preference number: 3 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRISTHSE*PRAPAF
Trigger: GAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCT...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR GCA 72 bp GGGGCCACCACGATCGTCGCTCGTGGACACACACCCTaGACGCGTGGCCCACTTGACACACACGCCCACAGC +
Preference number: 3 (lower is better)
Translates to: GATTIVARGHTP*TRGPLDTHAHS
Trigger: GCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR GCA 72 bp TCCCCGCCTCAGAACCCAGGAAGACAACGGTCTGGTTaGCCCAGGGGCCGGCTCCCACGTCCACAGCCACTC +
Preference number: 3 (lower is better)
Translates to: SPPQNPGRQRSG*PRGRLPRPQPL
Trigger: GAGTGGCTGTGGACGTGGGAGCCGGCCCCTGGGGCAACCAGACCGTTGTCTTCCTGGGTTCTGAGGCGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR GCA 72 bp CCCGCAGGAGTCCTGTGCAGTCCCCTAAGCCTGAGGTaGTGGCCCCGGACACGTCCTGCTCAAAGGCGGCTC +
Preference number: 3 (lower is better)
Translates to: PAGVLCSPLSLR*WPRTRPAQRRL
Trigger: GAGCCGCCTTTGAGCAGGACGTGTCCGGGGCCAGCACCTCAGGCTTAGGGGACTGCACAGGACTCCTGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CAA 90 bp GGAGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTAGCACGCGTGGCCCACTaGACACACACGCCCACAGCA +
Preference number: 3 (lower is better)
Translates to: GGHKGTGGMGLSHHPGAVARVAH*THTPTA
Trigger: TGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGC...TACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR CCA 72 bp GTCGAGGCACCTGATCCTCCGGCACCGGCGTCCAGATaGACTCGGGGGACTTCTGCTCTCGGAAGCGGCCTT +
Preference number: 3 (lower is better)
Translates to: VEAPDPPAPASR*TRGTSALGSGL
Trigger: AAGGCCGCTTCCGAGAGCAGAAGTCCCCCGAGTCCATCTGGACGCCGGTGCCGGAGGATCAGGTGCCTCGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CCA 72 bp GCAGGAGTCCTGTGCAGTCCCCTAAGCCTGAGGTGCTaGCCCCGGACACGTCCTGCTCAAAGGCGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: AGVLCSPLSLRC*PRTRPAQRRLW
Trigger: CCAGAGCCGCCTTTGAGCAGGACGTGTCCGGGGCCAGCACCTCAGGCTTAGGGGACTGCACAGGACTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CAA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGGGGAGGGCGAGCTGGTaGTGCTTCCTTGTGGCGGAG +
Preference number: 3 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQGRASW*CFLVAE
Trigger: CTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCC...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR TCA 72 bp GTGACTTCCGGGCAGGCCCTCCTCGTGTCTCCTGCCTaGAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGA +
Preference number: 3 (lower is better)
Translates to: VTSGQALLVSPA*NPGIVPASLCR
Trigger: TCTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGGCCTGCCCGGAAGTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR TCA 72 bp CAGGCCCCCAAGCCCTTTAGACAGCTGCTGCCGATGTaGCTTCCGGGCAGGCCCTCCTCGTGTCTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: QAPKPFRQLLPM*LPGRPSSCLLP
Trigger: AGGCAGGAGACACGAGGAGGGCCTGCCCGGAAGTCACATCGGCAGCAGCTGTCTAAAGGGCTTGGGGGCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR GCA 72 bp CGATGTGACTTCCGGGCAGGCCCTCCTCGTGTCTCCTaGCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTG +
Preference number: 3 (lower is better)
Translates to: RCDFRAGPPRVS*LKPRHCPRFPL
Trigger: CAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGGCCTGCCCGGAAGTCACATCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR GCA 72 bp TCCGGCACCGGCGTCCAGATGGACTCGGGGGACTTCTaGTCTCGGAAGCGGCCTTCAAACACAGCTGCCACC +
Preference number: 3 (lower is better)
Translates to: SGTGVQMDSGDF*SRKRPSNTAAT
Trigger: GGTGGCAGCTGTGTTTGAAGGCCGCTTCCGAGAGCAGAAGTCCCCCGAGTCCATCTGGACGCCGGTGCCGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CAA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTGCACGCGTGGCCCACTaGACACACACGCCCACAGCA +
Preference number: 3 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIARVAH*THTPTA
Trigger: TGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGC...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CAA 90 bp CAGTTCTTCATACACCCCGAGTACTGCTGGCAGCGAGCCACAGGCACTCGGACCGGCCGGACGAGGAACTaGAGGACCGTCCCCGCCTCA +
Preference number: 3 (lower is better)
Translates to: QFFIHPEYCWQRATGTRTGRTRN*RTVPAS
Trigger: TGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGCC...GGTCCGAGTGCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTGTATGAAGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CAA 90 bp CCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGCACCCCGAGAACGGAGTaGTGCAATTGGTTAGAAAAC +
Preference number: 3 (lower is better)
Translates to: PGWPPCPCAGPAPAAHGGTPRTE*CNWLEN
Trigger: GTTTTCTAACCAATTGCACAACTCCGTTCTCGGGGT...GCCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR TCA 72 bp TCCCTGAGGTGCTGGCATTGGGCCGGACGAGGAACTTaGGGACCGTCCCCGCCTCAGAACCCAGGAAGACAA +
Preference number: 3 (lower is better)
Translates to: SLRCWHWAGRGT*GPSPPQNPGRQ
Trigger: TTGTCTTCCTGGGTTCTGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGCCCAATGCCAGCACCTCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CCA 72 bp CTGCCGATACAGTTCTTCATACACCCCGAGTACTGCTaGCAGCGAGCCACAGGCACTCGGACCACGCAGCGG +
Preference number: 3 (lower is better)
Translates to: LPIQFFIHPEYC*QRATGTRTTQR
Trigger: CCGCTGCGTGGTCCGAGTGCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTGTATGAAGAACTGTATCGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CAA 90 bp CCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACACCCAACCCCGAGAACGGAGTaGTGCAATTGGTTAGAAAAC +
Preference number: 3 (lower is better)
Translates to: PPPRPLAHEHGTHTHAHPTPRTE*CNWLEN
Trigger: GTTTTCTAACCAATTGCACAACTCCGTTCTCGGGGT...TGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CAA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAACCTGAAACCCCGGCATaGTCCCCGCTTCCCTCTGCA +
Preference number: 3 (lower is better)
Translates to: KPPLPAATPRTELCNWLEPETPA*SPLPSA
Trigger: TGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGG...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CAA 90 bp ACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTTGGGTCTTGACAAAGTaGAGGATGTCATCCGGCAAG +
Preference number: 3 (lower is better)
Translates to: TRTRHAHARTPTHARGLGWVLTK*RMSSGK
Trigger: CTTGCCGGATGACATCCTCAACTTTGTCAAGACCCA...ACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR TCA 72 bp AAACTCCTCCAGGAAGACACTGAGCCCAGACGTCCCTaGGGTGCTGGCATTGGGCCGGACGAGGAACTTGAG +
Preference number: 3 (lower is better)
Translates to: KLLQEDTEPRRP*GAGIGPDEELE
Trigger: CTCAAGTTCCTCGTCCGGCCCAATGCCAGCACCTCAGGGACGTCTGGGCTCAGTGTCTTCCTGGAGGAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR GCA 72 bp GGACTTCTGCTCTCGGAAGCGGCCTTCAAACACAGCTaGCACCTGTGTCAGGTCAAAGGCGCAGACAGCCGA +
Preference number: 3 (lower is better)
Translates to: GLLLSEAAFKHS*HLCQVKGADSR
Trigger: TCGGCTGTCTGCGCCTTTGACCTGACACAGGTGGCAGCTGTGTTTGAAGGCCGCTTCCGAGAGCAGAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR-3UTR CAA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGAACGGAGTTGTGCAATaGGTTAGAAAACCGCAAAAG +
Preference number: 3 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVNGVVQ*VRKPQK
Trigger: CTTTTGCGGTTTTCTAACCAATTGCACAACTCCGTT...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CAA 90 bp AGGGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGAACGGAGTTGTGCAATaGGTTAGAAAACCGCAAAAG +
Preference number: 3 (lower is better)
Translates to: RAEDPASHVACMVSWRSENGVVQ*VRKPQK
Trigger: CTTTTGCGGTTTTCTAACCAATTGCACAACTCCGTT...CTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR-3UTR CAA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTAACGGAGTTGTGCAATaGGTTAGAAAACCGCAAAAG +
Preference number: 3 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRINGVVQ*VRKPQK
Trigger: CTTTTGCGGTTTTCTAACCAATTGCACAACTCCGTT...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
3UTR CAA 72 bp CCGCGGTGGCGGTCCCCAGGCCGGGCCTCGCCGCTGTaGAACGTGTGGGTGCGGCGCAGGGTGGCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: PRWRSPGRASPL*NVWVRRRVAAG
Trigger: TCCGGCCGCCACCCTGCGCCGCACCCACACGTTCAACAGCGGCGAGGCCCGGCCTGGGGACCGCCACCGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CAA 72 bp TCGCCCGCCCCGTGCGCCAGGATGGCCTCCTTGTCCTaGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SPAPCARMASLS*RRASSRRSRRP
Trigger: GGGCCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CAA 72 bp ACCGCCTCGCCCGCCCCGTGCGCCAGGATGGCCTCCTaGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: TASPAPCARMAS*SLRRASSRRSR
Trigger: CCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGCGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR TCA 90 bp CCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGCACCGGGGTCGAGGCACCTaGTCCTCCGGCACCGGCGTC +
Preference number: 4 (lower is better)
Translates to: PGPGVLAPSLAPGSRGWHRGRGT*SSGTGV
Trigger: GACGCCGGTGCCGGAGGATCAGGTGCCTCGACCCCG...GTGCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CACCGCCTCGCCCGCCCCGTGCGCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAAGCCTCCCCTGCCTaGCGCCACCCCGAGAACGGA +
Preference number: 4 (lower is better)
Translates to: HRLARPVRQDGLLVLAPGQASPA*RHPENG
Trigger: TCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTTG...GCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGCGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR TCA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGGCTCGCCCAGGCGGCTaGCGCTCAGCACCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: THAHLPGPLHTNTARTRTARPGG*RSAPPR
Trigger: GCGAGGCGGTGCTGAGCGTCAGCCGCCTGGGCGAGC...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGCGGGCCTCGCCGCTGTTaGACGTGTGGGTGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: PGWPPCPCAGPAPAAHGGGPRRC*TCGCGA
Trigger: TGCGCCGCACCCACACGTTCAACAGCGGCGAGGCCC...GCCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCCTCGCCCGCCCCGTaGGCCAGGATGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVASPAP*ARMASL
Trigger: CAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGC...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGTCGTGGGGCCCGCCCTaGAGCAGCGTGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GRWGHHDRRSWTHTLHAWSWGPP*SSVALA
Trigger: GGCCAAGGCCACGCTGCTGCAGGGCGGGCCCCACGA...CCACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CTCCCGCCGCTCACGGAGGCCCACGAACCAGCCCACGCTGAAGCCGGACACCACTCGTGGGGCCCGCCCTaGAGCAGCGTGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LPPLTEAHEPAHAEAGHHSWGPP*SSVALA
Trigger: GGCCAAGGCCACGCTGCTGCAGGGCGGGCCCCACGA...GTGGTGTCCGGCTTCAGCGTGGGCTGGTTCGTGGGCCTCCGTGAGCGGCGGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp CACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACTGCGGCAGCGGCGTCTaGTCGGGCGTGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HAHLPGPLHTNTARTRTHCGSGV*SGVGSS
Trigger: GCTGCTGCCCACGCCCGAGCAGACGCCGCTGCCGCA...GTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCTGCGGCAGCGGCGTCTaGTCGGGCGTGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARCGSGV*SGVGSS
Trigger: GCTGCTGCCCACGCCCGAGCAGACGCCGCTGCCGCA...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AGGCGCTTCTGCGGCAGCGGCGTCTGCTCGGGCGTGGGCAGCAGCCCCGAGTCCCGTCCAAGCCTCCCCTaGCTGCCGCCACCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: RRFCGSGVCSGVGSSPESRPSLP*LPPPRE
Trigger: TTCTCGGGGTGGCGGCAGGCAGGGGAGGCTTGGACG...GGACTCGGGGCTGCTGCCCACGCCCGAGCAGACGCCGCTGCCGCAGAAGCGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACCCCGAGTCCAGGTCGTaGGGCCCGCCCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHPESRS*GPPCSS
Trigger: GCTGCTGCAGGGCGGGCCCCACGACCTGGACTCGGG...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp TGCTGGCAGCGAGCCACAGGCACTCGGACCACGCAGCGGGGGAAGGCAGCCAGCCCCGAGTCCAGGTCGTaGGGCCCGCCCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CWQRATGTRTTQRGKAASPESRS*GPPCSS
Trigger: GCTGCTGCAGGGCGGGCCCCACGACCTGGACTCGGG...GCTGGCTGCCTTCCCCCGCTGCGTGGTCCGAGTGCCTGTGGCTCGCTGCCAGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp CCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGCACGGTGCGGGTGCGGAGTaGGCAGGCGCTTCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: PGPGVLAPSLAPGSRGWHGAGAE*AGASAA
Trigger: TGCCGCAGAAGCGCCTGCCCACTCCGCACCCGCACC...GTGCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGCGGGGTCGAGGCACCTaGTCCTCCGGCACCGGCGTC +
Preference number: 4 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGRGRGT*SSGTGV
Trigger: GACGCCGGTGCCGGAGGATCAGGTGCCTCGACCCCG...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACGCTCGCCCAGGCGGCTaGCGCTCAGCACCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHARPGG*RSAPPR
Trigger: GCGAGGCGGTGCTGAGCGTCAGCCGCCTGGGCGAGC...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp GCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGGTCCCTCGTCAGGGCTaGGTGCTCCACGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ARMASLSLRRASSRRSRRVPRQG*VLHGCS
Trigger: GGAGCAGCCGTGGAGCACTCAGCCCTGACGAGGGAC...CCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp CACCGCCTCGCCCGCCCCGTGCGCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGACGTCCCTGAGGTaGTGGCATTGGGCCGGACGA +
Preference number: 4 (lower is better)
Translates to: HRLARPVRQDGLLVLAPGQTSLR*WHWAGR
Trigger: TCGTCCGGCCCAATGCCAGCACCTCAGGGACGTCTG...GCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGCGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp CCCACGAACCAGCCCACGCTGAAGCCGGACACCACGGCTCCCACCACGAAGGCCGCCTCGCCCGCCCCGTaGGCCAGGATGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PTNQPTLKPDTTAPTTKAASPAP*ARMASL
Trigger: CAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGC...GGCCTTCGTGGTGGGAGCCGTGGTGTCCGGCTTCAGCGTGGGCTGGTTCGTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp CCCACGAACCAGCCCACGCTGAAGCCGGACACCACGGCTCCCACCACGAAGGCCTGCGGCAGCGGCGTCTaGTCGGGCGTGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PTNQPTLKPDTTAPTTKACGSGV*SGVGSS
Trigger: GCTGCTGCCCACGCCCGAGCAGACGCCGCTGCCGCA...GGCCTTCGTGGTGGGAGCCGTGGTGTCCGGCTTCAGCGTGGGCTGGTTCGTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGGGTGGGCCAAGTCTGTaGCCGGCCGGGCGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGGGPSL*PAGRGS
Trigger: GCTGCCACGCCCGGCCGGGCACAGACTTGGCCCACC...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCACCGACGACGTTACCAGCAGGTTCACCGACACCAGCCCCGCGCGGTCCTCGGGGTGGGCCAAGTCTGTaGCCGGCCGGGCGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PPTTLPAGSPTPAPRGPRGGPSL*PAGRGS
Trigger: GCTGCCACGCCCGGCCGGGCACAGACTTGGCCCACC...CCGAGGACCGCGCGGGGCTGGTGTCGGTGAACCTGCTGGTAACGTCGTCGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCACCCACTCGGAGTTaGCCCGGGCCCCGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHAPTRS*PGPRRS
Trigger: AGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGC...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGTCACGGTGCGCAGGGTaGGCCTGTCCCCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRSRCAG*ACPRGC
Trigger: GCAGCCTCGGGGACAGGCCCACCCTGCGCACCGTGA...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGAGGATCCAGGGCGCATaGCCCAGCGAGGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRRIQGA*PSEGTA
Trigger: GGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCT...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGCGGTCCTCGGAGAGGCTaGCCCGCAGGAGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PGWPPCPCAGPAPAAHGGGPRRG*PAGVLC
Trigger: GCACAGGACTCCTGCGGGCCAGCCTCTCCGAGGACC...GCCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGCTCGCGGGGTCTGCATaGCGAGGGCCAGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVLAGSA*RGPGDR
Trigger: CCTGTCGCCTGGCCCTCGCCATGCAGACCCCGCGAG...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGCACCCCCGTGCGCCAGGATaGCCTCCTTGTCCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: PGPGVLAPSLAPGSRGWHPRAPG*PPCPCA
Trigger: GGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGG...GTGCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AGGCGCTGGAGGCATTGTACTGCATCCCGGGGGCTGCGCAGCACCCGGGCCGGGCGCCCTGCAGCAGCGTaGCCTTGGCCCAGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: RRWRHCTASRGLRSTRAGRPAAA*PWPSRS
Trigger: AGAACGGCTGGGCCAAGGCCACGCTGCTGCAGGGCG...CCCGGCCCGGGTGCTGCGCAGCCCCCGGGATGCAGTACAATGCCTCCAGCGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp CCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACACCCACCCGAGTCCAGGTCGTaGGGCCCGCCCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPPRPLAHEHGTHTHAHPPESRS*GPPCSS
Trigger: GCTGCTGCAGGGCGGGCCCCACGACCTGGACTCGGG...TGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGGCGTCTGCTCGGGCGTaGGCAGCAGCCCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GRWGHHDRRSWTHTLHAWASARA*AAAPSP
Trigger: TGGACTCGGGGCTGCTGCCCACGCCCGAGCAGACGC...CCACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGGTGCGGGTGCGGAGTaGGCAGGCGCTTCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARGAGAE*AGASAA
Trigger: TGCCGCAGAAGCGCCTGCCCACTCCGCACCCGCACC...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CAGGGTCCGCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATGGTGCGGGTGCGGAGTaGGCAGGCGCTTCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: QGPQDPGRMAQRGHRLVHGAGAE*AGASAA
Trigger: TGCCGCAGAAGCGCCTGCCCACTCCGCACCCGCACC...ATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGCGGACCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR TCA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGAGCCCAGACGTCCCTaGGGTGCTGGCATTGGGCCG +
Preference number: 4 (lower is better)
Translates to: PRPLGPPRSSLVDTHPAREPRRP*GAGIGP
Trigger: CGGCCCAATGCCAGCACCTCAGGGACGTCTGGGCTC...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGGCCTCGCCGCTGTTaGACGTGTGGGTGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: QAAGATTIVARGHTPCTRGPRRC*TCGCGA
Trigger: TGCGCCGCACCCACACGTTCAACAGCGGCGAGGCCC...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTTGGGGAGCAGCTGCTGCCGATGTaGCTTCCGGGCAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: HGTHTHAHPHTPGAWVGEQLLPM*LPGRPS
Trigger: GGAGGGCCTGCCCGGAAGTCACATCGGCAGCAGCTG...CTCCCCAACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp ACCCGGGCCGGGGTCGAGGCACCTGATCCTCCGGCACCGGCGTCCAGATGGACTCAGCTGCTGCCGATGTaGCTTCCGGGCAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TRAGVEAPDPPAPASRWTQLLPM*LPGRPS
Trigger: GGAGGGCCTGCCCGGAAGTCACATCGGCAGCAGCTG...AGTCCATCTGGACGCCGGTGCCGGAGGATCAGGTGCCTCGACCCCGGCCCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp GCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGAAGCTCAGCAGCCGCTaGCCTGTCTCGCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: AQAAGATTIVARGHTPCTKLSSR*PVSPPP
Trigger: CGGCGGTGGCGAGACAGGGCAGCGGCTGCTGAGCTT...CGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGCACGCCCCGGACACGTCCTaGTCAAAGGCGGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PGPGVLAPSLAPGSRGWHAPDTS*SKAALV
Trigger: CACCAGAGCCGCCTTTGAGCAGGACGTGTCCGGGGC...GTGCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGGTGACGCTCGCGGGGTCTaGATGGCGAGGGCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: AGSRAHGPARAPPRPSEGDARGV*MARARR
Trigger: TCGCCTGGCCCTCGCCATGCAGACCCCGCGAGCGTC...ACCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGTGGGCAGGCGCTTCTaGGGCAGCGGCGTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVVGRRF*GSGVCS
Trigger: CGAGCAGACGCCGCTGCCGCAGAAGCGCCTGCCCAC...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTTGGGGAGGCAGCTCCGTGGACGTaGGGGGCTCCAGCTCTACGC +
Preference number: 4 (lower is better)
Translates to: HGTHTHAHPHTPGAWVGEAAPWT*GAPALR
Trigger: GCGTAGAGCTGGAGCCCCCCACGTCCACGGAGCTGC...CTCCCCAACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp ACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACATCACGGTGCGCAGGGTaGGCCTGTCCCCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TPTSPAPCTRTRHAHARTSRCAG*ACPRGC
Trigger: GCAGCCTCGGGGACAGGCCCACCCTGCGCACCGTGA...TGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTTCACGGTGCGCAGGGTaGGCCTGTCCCCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QAAGATTIVARGHTPCTRSRCAG*ACPRGC
Trigger: GCAGCCTCGGGGACAGGCCCACCCTGCGCACCGTGA...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCACCGACGACGTTACCAGCAGGTTCACCGACACCAGCCCCGCGCGGTCCTCGGAGGATCCAGGGCGCATaGCCCAGCGAGGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: PPTTLPAGSPTPAPRGPRRIQGA*PSEGTA
Trigger: GGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCT...CCGAGGACCGCGCGGGGCTGGTGTCGGTGAACCTGCTGGTAACGTCGTCGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGGTCCTCGGAGAGGCTaGCCCGCAGGAGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHGPRRG*PAGVLC
Trigger: GCACAGGACTCCTGCGGGCCAGCCTCTCCGAGGACC...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGACCCCCGGGCCTTCTaGAAGCCCCAGCGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: QAAGATTIVARGHTPCTRDPRAF*KPQRRL
Trigger: GAGCCGACGCTGGGGCTTCCAGAAGGCCCGGGGGTC...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCCACGAACCAGCCCACGCTGAAGCCGGACACCACGGCTCCCACCACGAAGGCCCTCGCGGGGTCTGCATaGCGAGGGCCAGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: PTNQPTLKPDTTAPTTKALAGSA*RGPGDR
Trigger: CCTGTCGCCTGGCCCTCGCCATGCAGACCCCGCGAG...GGCCTTCGTGGTGGGAGCCGTGGTGTCCGGCTTCAGCGTGGGCTGGTTCGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCCCCCGTGCGCCAGGATaGCCTCCTTGTCCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARPRAPG*PPCPCA
Trigger: GGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGG...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCCCCGTGCGCCAGGATaGCCTCCTTGTCCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: AQAAGATTIVARGHTPCTPRAPG*PPCPCA
Trigger: GGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGG...CGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACCGCCCTGCAGCAGCGTaGCCTTGGCCCAGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHRPAAA*PWPSRS
Trigger: AGAACGGCTGGGCCAAGGCCACGCTGCTGCAGGGCG...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCCACGAACCAGCCCACGCTGAAGCCGGACACCACGGCTCCCACCACGAAGGCCGCGTCTGCTCGGGCGTaGGCAGCAGCCCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PTNQPTLKPDTTAPTTKAASARA*AAAPSP
Trigger: TGGACTCGGGGCTGCTGCCCACGCCCGAGCAGACGC...GGCCTTCGTGGTGGGAGCCGTGGTGTCCGGCTTCAGCGTGGGCTGGTTCGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp GGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGGTGGGTCTTGACACGGTCCGGGCTGGCGTaGGGGGTGAGCGGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: GAWPSEGTASSIRGWVLTRSGLA*GVSGKS
Trigger: CGACTTCCCGCTCACCCCCCACGCCAGCCCGGACCG...TGTCAAGACCCACCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp CCCACGAACCAGCCCACGCTGAAGCCGGACACCACGGCTCCCACCACGAAGGCCCGGGCCCCGGCGTTCTaGCACCGTCTCTCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PTNQPTLKPDTTAPTTKARAPAF*HRLSLL
Trigger: CAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCG...GGCCTTCGTGGTGGGAGCCGTGGTGTCCGGCTTCAGCGTGGGCTGGTTCGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR TCA 90 bp CCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACACCCAGCCGGACGAGGAACTTaGGGACCGTCCCCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PPPRPLAHEHGTHTHAHPAGRGT*GPSPPQ
Trigger: CTGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGC...TGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp ACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAGAGCCCAGACGTCCCTaGGGTGCTGGCATTGGGCCG +
Preference number: 4 (lower is better)
Translates to: TPTSPAPCTRTRHAHARTEPRRP*GAGIGP
Trigger: CGGCCCAATGCCAGCACCTCAGGGACGTCTGGGCTC...TGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCCACGCGTGGCCCACTTaGCACACACGCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARHAWPT*HTRPQQ
Trigger: CTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTG...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGCACGCGTGGCCCACTTaGCACACACGCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRHAWPT*HTRPQQ
Trigger: CTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTG...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp GGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGCACGCGTGGCCCACTTaGCACACACGCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: GRWGHHDRRSWTHTLHAWHAWPT*HTRPQQ
Trigger: CTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTG...CCACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGCTCGCCCAGGCGGCTaGCGCTCAGCACCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PSSCLLPETPALSPLPSAARPGG*RSAPPR
Trigger: GCGAGGCGGTGCTGAGCGTCAGCCGCCTGGGCGAGC...TGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGCAGCTGCTGCCGATGTaGCTTCCGGGCAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGQLLPM*LPGRPS
Trigger: GGAGGGCCTGCCCGGAAGTCACATCGGCAGCAGCTG...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGGCGTCCGGGCCCGCTaGCCACAAACACGGGATAGT +
Preference number: 4 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARGVRAR*PQTRDS
Trigger: ACTATCCCGTGTTTGTGGGCAGCGGGCCCGGACGCC...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGAGACAACGGTCTGGTTaGCCCAGGGGCCGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVRQRSG*PRGRLP
Trigger: TGGGAGCCGGCCCCTGGGGCAACCAGACCGTTGTCT...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGCACCAGACGTCCCTGAGGTaGTGGCATTGGGCCGGACGA +
Preference number: 4 (lower is better)
Translates to: PGPGVLAPSLAPGSRGWHQTSLR*WHWAGR
Trigger: TCGTCCGGCCCAATGCCAGCACCTCAGGGACGTCTG...GTGCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGAAGCTCAGCAGCCGCTaGCCTGTCTCGCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: THAHLPGPLHTNTARTRTKLSSR*PVSPPP
Trigger: CGGCGGTGGCGAGACAGGGCAGCGGCTGCTGAGCTT...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGGTAAGCTCAGCAGCCGCTaGCCTGTCTCGCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: AGSRAHGPARAPPRPSEGKLSSR*PVSPPP
Trigger: CGGCGGTGGCGAGACAGGGCAGCGGCTGCTGAGCTT...ACCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp CAGGGTCCGCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATGCCCCGGACACGTCCTaGTCAAAGGCGGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: QGPQDPGRMAQRGHRLVHAPDTS*SKAALV
Trigger: CACCAGAGCCGCCTTTGAGCAGGACGTGTCCGGGGC...ATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGCGGACCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp GGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGCCCCTAAGCCTGAGGTaGTGGCCCCGGACACGTCCT +
Preference number: 4 (lower is better)
Translates to: GRWGHHDRRSWTHTLHAWPLSLR*WPRTRP
Trigger: AGGACGTGTCCGGGGCCAGCACCTCAGGCTTAGGGG...CCACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACGACGCTCGCGGGGTCTaGATGGCGAGGGCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHDARGV*MARARR
Trigger: TCGCCTGGCCCTCGCCATGCAGACCCCGCGAGCGTC...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGTTGGCCCAGCCGTTCTaGATCAGGGGCGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVLAQPF*IRGASR
Trigger: CCTGCTGGCGCCCCTGATGCAGAACGGCTGGGCCAA...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp ACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTGCACCCACTCGGAGTTaGCCCGGGCCCCGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: TRTRHAHARTPTHARGLGAPTRS*PGPRRS
Trigger: AGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGC...ACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACACCCACGTCCAAGCCTCCCCTaGCTGCCGCCACCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: PPPRPLAHEHGTHTHAHPRPSLP*LPPPRE
Trigger: TTCTCGGGGTGGCGGCAGGCAGGGGAGGCTTGGACG...TGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCTGCAGCAGCGTGGCCTTGGCCCAGCCGTTCTGCATCAGGGGCGCCAGCAGGGACCTCCCCGGCCCCTTaGACACGAACACGGCACGCA +
Preference number: 4 (lower is better)
Translates to: PAAAWPWPSRSASGAPAGTSPAP*TRTRHA
Trigger: TGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGT...CCCTGCTGGCGCCCCTGATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp CCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGCACGCCACTCGAGTCAGCTaGTGCCTCATCAGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: PGPGVLAPSLAPGSRGWHATRVS*CLIRVR
Trigger: GCGGACCCTGATGAGGCACCAGCTGACTCGAGTGGC...GTGCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGGGTCCTCGGAGAGGCTaGCCCGCAGGAGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: THAHLPGPLHTNTARTRTGPRRG*PAGVLC
Trigger: GCACAGGACTCCTGCGGGCCAGCCTCTCCGAGGACC...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACCTCGCGGGGTCTGCATaGCGAGGGCCAGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHLAGSA*RGPGDR
Trigger: CCTGTCGCCTGGCCCTCGCCATGCAGACCCCGCGAG...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCGCCCTGCAGCAGCGTaGCCTTGGCCCAGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: THAHLPGPLHTNTARTRTRPAAA*PWPSRS
Trigger: AGAACGGCTGGGCCAAGGCCACGCTGCTGCAGGGCG...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp ACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTGCGTCTGCTCGGGCGTaGGCAGCAGCCCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: TRTRHAHARTPTHARGLGASARA*AAAPSP
Trigger: TGGACTCGGGGCTGCTGCCCACGCCCGAGCAGACGC...ACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GGCCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGGGCGTGGGGGCCCAGTaGCCTCCTCAGGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: GPPRVSCLKPRHCPRFPLGVGAQ*PPQAAR
Trigger: ACGGGCAGCCTGAGGAGGCCACTGGGCCCCCACGCC...CAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCCGCTGTTGAACGTGTaGGTGCGGCGCAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: THAHLPGPLHTNTARTRTPLLNV*VRRRVA
Trigger: CGCCACCCTGCGCCGCACCCACACGTTCAACAGCGG...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACCCTGGTTCCCGTGGCTaGCACTGCCAAGGCATCGGG +
Preference number: 4 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHPGSRG*HCQGIG
Trigger: CCCGATGCCTTGGCAGTGCCAGCCACGGGAACCAGG...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGACCGTCTCTCGCTCCTaGTTCCCGTGGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: ARMASLSLRRASSRRSRRTVSRS*FPWLAL
Trigger: CAGTGCCAGCCACGGGAACCAGGAGCGAGAGACGGT...CCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACCGGGCCCCGGCGTTCTaGCACCGTCTCTCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHRAPAF*HRLSLL
Trigger: CAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCG...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGAGCGGGCCATACCGCTaGTGTTGTCTCCGACGGGCT +
Preference number: 4 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVSGPYR*CCLRRA
Trigger: AGCCCGTCGGAGACAACATCAGCGGTATGGCCCGCT...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCACGGGGTCGAGGCACCTaGTCCTCCGGCACCGGCGTC +
Preference number: 4 (lower is better)
Translates to: PSSCLLPETPALSPLPSARGRGT*SSGTGV
Trigger: GACGCCGGTGCCGGAGGATCAGGTGCCTCGACCCCG...TGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGCCTCCAGGAAGACACTaGGCCCAGACGTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVPPGRH*AQTSLR
Trigger: CCTCAGGGACGTCTGGGCTCAGTGTCTTCCTGGAGG...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp GGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGGTGGGTCTTGACACGAACCAGCCCACGCTaGAGCCGGACACCACGGCTC +
Preference number: 4 (lower is better)
Translates to: GAWPSEGTASSIRGWVLTRTSPR*SRTPRL
Trigger: GAGCCGTGGTGTCCGGCTTCAGCGTGGGCTGGTTCG...TGTCAAGACCCACCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR TCA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGCTCGTGTCTCCTGCCTaGAACCCCGGCATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVLVSPA*NPGIVP
Trigger: GGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAG...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAGGAAGGACGTCCACTaGTTCTCCAGCACGCGGGGG +
Preference number: 4 (lower is better)
Translates to: HAHLPGPLHTNTARTRTHRKDVH*FSSTRG
Trigger: CCCCCGCGTGCTGGAGAAGCAGTGGACGTCCTTCCT...GTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTTGGGGAGAGGAAGGACGTCCACTaGTTCTCCAGCACGCGGGGG +
Preference number: 4 (lower is better)
Translates to: HGTHTHAHPHTPGAWVGERKDVH*FSSTRG
Trigger: CCCCCGCGTGCTGGAGAAGCAGTGGACGTCCTTCCT...CTCCCCAACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GACTTGAGCACCCACTCGGAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCAGACAACGGTCTGGTTaGCCCAGGGGCCGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: DLSTHSELPRAPAFWHRLRQRSG*PRGRLP
Trigger: TGGGAGCCGGCCCCTGGGGCAACCAGACCGTTGTCT...GAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCTCAAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACCAGACGTCCCTGAGGTaGTGGCATTGGGCCGGACGA +
Preference number: 4 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHQTSLR*WHWAGR
Trigger: TCGTCCGGCCCAATGCCAGCACCTCAGGGACGTCTG...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGGTCCCCTAAGCCTGAGGTaGTGGCCCCGGACACGTCCT +
Preference number: 4 (lower is better)
Translates to: AGSRAHGPARAPPRPSEGPLSLR*WPRTRP
Trigger: AGGACGTGTCCGGGGCCAGCACCTCAGGCTTAGGGG...ACCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGCCCGCAGGAGTCCTGTaGAGTCCCCTAAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRPAGVL*SPLSLR
Trigger: CCTCAGGCTTAGGGGACTGCACAGGACTCCTGCGGG...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACCCCGCAGGAGTCCTGTaGAGTCCCCTAAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHPAGVL*SPLSLR
Trigger: CCTCAGGCTTAGGGGACTGCACAGGACTCCTGCGGG...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGACACACACCCTaGACGCGTGGCCCACTTGAC +
Preference number: 4 (lower is better)
Translates to: AQAAGATTIVARGHTPCTRGHTP*TRGPLD
Trigger: GTCAAGTGGGCCACGCGTGCAGGGTGTGTGTCCACG...CGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACCGTGGACACACACCCTaGACGCGTGGCCCACTTGAC +
Preference number: 4 (lower is better)
Translates to: HAHLPGPLHTNTARTRTHRGHTP*TRGPLD
Trigger: GTCAAGTGGGCCACGCGTGCAGGGTGTGTGTCCACG...GTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AGGGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGCCTCGCCCGCCCCGTaGGCCAGGATGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RAEDPASHVACMVSWRSEASPAP*ARMASL
Trigger: CAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGC...CTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTTGGCCCAGCCGTTCTaGATCAGGGGCGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGLAQPF*IRGASR
Trigger: CCTGCTGGCGCCCCTGATGCAGAACGGCTGGGCCAA...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGTCGTGGGGCCCGCCCTaGAGCAGCGTGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQSWGPP*SSVALA
Trigger: GGCCAAGGCCACGCTGCTGCAGGGCGGGCCCCACGA...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GGAGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTAGTGGGCAGGCGCTTCTaGGGCAGCGGCGTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GGHKGTGGMGLSHHPGAVVGRRF*GSGVCS
Trigger: CGAGCAGACGCCGCTGCCGCAGAAGCGCCTGCCCAC...TACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GGCCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGGCACCCACTCGGAGTTaGCCCGGGCCCCGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: GPPRVSCLKPRHCPRFPLAPTRS*PGPRRS
Trigger: AGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGC...CAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGACCTCCCCGGCCCCTTaGACACGAACACGGCACGCA +
Preference number: 4 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGTSPAP*TRTRHA
Trigger: TGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGT...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGCAACATTGGCGTGCTTaGGGTCGTACGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRQHWRA*GRTGSG
Trigger: CCCGCTGCCCGTACGACCCCAAGCACGCCAATGTTG...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGGCCACTCGAGTCAGCTaGTGCCTCATCAGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: GRWGHHDRRSWTHTLHAWATRVS*CLIRVR
Trigger: GCGGACCCTGATGAGGCACCAGCTGACTCGAGTGGC...CCACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACCACCCCGAGTACTGCTaGCAGCGAGCCACAGGCACT +
Preference number: 4 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHHPEYC*QRATGT
Trigger: AGTGCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTG...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCCACAGCAGCCTTCGCTaGCACGCACACACACGCCCA +
Preference number: 4 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARHSSLR*HAHTRP
Trigger: TGGGCGTGTGTGTGCGTGCCAGCGAAGGCTGCTGTG...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACCACAGCAGCCTTCGCTaGCACGCACACACACGCCCA +
Preference number: 4 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHHSSLR*HAHTRP
Trigger: TGGGCGTGTGTGTGCGTGCCAGCGAAGGCTGCTGTG...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTTGGGGAGCACAGCAGCCTTCGCTaGCACGCACACACACGCCCA +
Preference number: 4 (lower is better)
Translates to: HGTHTHAHPHTPGAWVGEHSSLR*HAHTRP
Trigger: TGGGCGTGTGTGTGCGTGCCAGCGAAGGCTGCTGTG...CTCCCCAACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGCACGATCGTCGCTCGTaGACACACACCCTGCACGCG +
Preference number: 4 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRHDRRS*THTLHA
Trigger: CGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTG...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACCACGATCGTCGCTCGTaGACACACACCCTGCACGCG +
Preference number: 4 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHHDRRS*THTLHA
Trigger: CGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTG...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGCAGCAGCGTGGCCTTaGCCCAGCCGTTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARAAAWP*PSRSAS
Trigger: TGATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGC...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGCGGTCCGGGCTGGCGTaGGGGGTGAGCGGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQRSGLA*GVSGKS
Trigger: CGACTTCCCGCTCACCCCCCACGCCAGCCCGGACCG...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AGGGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGCGTGGGGGCCCAGTaGCCTCCTCAGGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: RAEDPASHVACMVSWRSEGVGAQ*PPQAAR
Trigger: ACGGGCAGCCTGAGGAGGCCACTGGGCCCCCACGCC...CTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTCCTGGTTCCCGTGGCTaGCACTGCCAAGGCATCGGG +
Preference number: 4 (lower is better)
Translates to: QAAGATTIVARGHTPCTRPGSRG*HCQGIG
Trigger: CCCGATGCCTTGGCAGTGCCAGCCACGGGAACCAGG...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACACCGTCTCTCGCTCCTaGTTCCCGTGGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHTVSRS*FPWLAL
Trigger: CAGTGCCAGCCACGGGAACCAGGAGCGAGAGACGGT...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGAGGGGGAGGGCGAGCTaGTTGTGCTTCCTTGTGGCG +
Preference number: 4 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVRGRAS*LCFLVA
Trigger: CGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCT...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp ACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACATGGCGCACACCGGGTTaGAGGCGTTGGAACCGCACA +
Preference number: 4 (lower is better)
Translates to: TPTSPAPCTRTRHAHARTWRTPG*RRWNRT
Trigger: TGTGCGGTTCCAACGCCTTCAACCCGGTGTGCGCCA...TGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGAGCGGGCCATACCGCTaGTGTTGTCTCCGACGGGCT +
Preference number: 4 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVSGPYR*CCLRRA
Trigger: AGCCCGTCGGAGACAACATCAGCGGTATGGCCCGCT...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp ACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACACCTCCAGGAAGACACTaGGCCCAGACGTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TPTSPAPCTRTRHAHARTPPGRH*AQTSLR
Trigger: CCTCAGGGACGTCTGGGCTCAGTGTCTTCCTGGAGG...TGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCCCATTTTCCTGTCTaGGCAGCAGGGGTATCCCCC +
Preference number: 4 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVAHFPV*AAGVSP
Trigger: GGGGGATACCCCTGCTGCTCAGACAGGAAAATGGGC...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000586582.6
CDS-3UTR TCA 90 bp GGCCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCGAACCAGCCCACGCTaGAGCCGGACACCACGGCTC +
Preference number: 4 (lower is better)
Translates to: GPPRVSCLKPRHCPRFPLRTSPR*SRTPRL
Trigger: GAGCCGTGGTGTCCGGCTTCAGCGTGGGCTGGTTCG...CAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGGGGCCTCGCCGCTGTTaGACGTGTGGGTGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQGPRRC*TCGCGA
Trigger: TGCGCCGCACCCACACGTTCAACAGCGGCGAGGCCC...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp AAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTACAGAGGGCGACAGGAGGAGGTaGCGCCTCGGAGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: KGTGGMGLSHHPGAVFTEGDRRR*RLGAAA
Trigger: GGCCGCGGCTCCGAGGCGTCACCTCCTCCTGTCGCC...CTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676793.1
CDS-3UTR GCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGAGTCATGTTTCACGGTaGGCAGGGTGGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRSHVSR*AGWACP
Trigger: GGGACAGGCCCACCCTGCGCACCGTGAAACATGACT...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGCAGCCGAGCCAGGGATaGTGTTGCTGGGCGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRQPSQG*CCWAWK
Trigger: TTTCCACGCCCAGCAACAGCATCCCTGGCTCGGCTG...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGACTCGGGGGACTTCTaGTCTCGGAAGCGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVDSGDF*SRKRPS
Trigger: TGAAGGCCGCTTCCGAGAGCAGAAGTCCCCCGAGTC...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGGACGCTCGCGGGGTCTaGATGGCGAGGGCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQDARGV*MARARR
Trigger: TCGCCTGGCCCTCGCCATGCAGACCCCGCGAGCGTC...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGTGGGCAGGCGCTTCTaGGGCAGCGGCGTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PSSCLLPETPALSPLPSAVGRRF*GSGVCS
Trigger: CGAGCAGACGCCGCTGCCGCAGAAGCGCCTGCCCAC...TGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTGGTGGGCCAAGTCTGTaGCCGGCCGGGCGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIGGPSL*PAGRGS
Trigger: GCTGCCACGCCCGGCCGGGCACAGACTTGGCCCACC...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGCACCCTCCTCGTGTCTCCTaGCTGAAACCCCGGCATTGT +
Preference number: 4 (lower is better)
Translates to: PGPGVLAPSLAPGSRGWHPPRVS*LKPRHC
Trigger: ACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG...GTGCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACGCCAGCCACGTGGCATaGATGGTCAGCTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HAHLPGPLHTNTARTRTHASHVA*MVSWRS
Trigger: TGACCTCCAGCTGACCATGCATGCCACGTGGCTGGC...GTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGGCCAGCCACGTGGCATaGATGGTCAGCTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GRWGHHDRRSWTHTLHAWASHVA*MVSWRS
Trigger: TGACCTCCAGCTGACCATGCATGCCACGTGGCTGGC...CCACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GACTTGAGCACCCACTCGGAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCCAACATTGGCGTGCTTaGGGTCGTACGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: DLSTHSELPRAPAFWHRLQHWRA*GRTGSG
Trigger: CCCGCTGCCCGTACGACCCCAAGCACGCCAATGTTG...GAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCTCAAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGGTCAACATTGGCGTGCTTaGGGTCGTACGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: AGSRAHGPARAPPRPSEGQHWRA*GRTGSG
Trigger: CCCGCTGCCCGTACGACCCCAAGCACGCCAATGTTG...ACCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGGCACCGGCGTCCAGATaGACTCGGGGGACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGAPASR*TRGTSA
Trigger: AGCAGAAGTCCCCCGAGTCCATCTGGACGCCGGTGC...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp ACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAAGGAAGACAACGGTCTaGTTGCCCCAGGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: TPTSPAPCTRTRHAHARTRKTTV*LPQGPA
Trigger: AGCCGGCCCCTGGGGCAACCAGACCGTTGTCTTCCT...TGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACACCCAACGTCCCTGAGGTGCTaGCATTGGGCCGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: PPPRPLAHEHGTHTHAHPTSLRC*HWAGRG
Trigger: TCCTCGTCCGGCCCAATGCCAGCACCTCAGGGACGT...TGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GACTTGAGCACCCACTCGGAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCACGTCCCTGAGGTGCTaGCATTGGGCCGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: DLSTHSELPRAPAFWHRLTSLRC*HWAGRG
Trigger: TCCTCGTCCGGCCCAATGCCAGCACCTCAGGGACGT...GAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCTCAAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGGTCTAAGCCTGAGGTGCTaGCCCCGGACACGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AGSRAHGPARAPPRPSEGLSLRC*PRTRPA
Trigger: AGCAGGACGTGTCCGGGGCCAGCACCTCAGGCTTAG...ACCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGGACCCCCGGGCCTTCTaGAAGCCCCAGCGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQDPRAF*KPQRRL
Trigger: GAGCCGACGCTGGGGCTTCCAGAAGGCCCGGGGGTC...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp ACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAGCAGCAGCGTGGCCTTaGCCCAGCCGTTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: TPTSPAPCTRTRHAHARTAAAWP*PSRSAS
Trigger: TGATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGC...TGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GGAGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTACCGCTGTTGAACGTGTaGGTGCGGCGCAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GGHKGTGGMGLSHHPGAVPLLNV*VRRRVA
Trigger: CGCCACCCTGCGCCGCACCCACACGTTCAACAGCGG...TACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGGTCGCTCCTGGTTCCCGTaGCTGGCACTGCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: AGSRAHGPARAPPRPSEGRSWFP*LALPRH
Trigger: ATGCCTTGGCAGTGCCAGCCACGGGAACCAGGAGCG...ACCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGACCGTCTCTCGCTCCTaGTTCCCGTGGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVTVSRS*FPWLAL
Trigger: CAGTGCCAGCCACGGGAACCAGGAGCGAGAGACGGT...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp ACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAAGGGGACGGGTGGCATaGGACTCTCTCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: TPTSPAPCTRTRHAHARTRGRVA*DSLTTL
Trigger: CAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCT...TGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CAGGGTCCGCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATGCCACGTGGCATGCATaGTCAGCTGGAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QGPQDPGRMAQRGHRLVHATWHA*SAGGQR
Trigger: CCTCTGACCTCCAGCTGACCATGCATGCCACGTGGC...ATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGCGGACCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp GCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGACCCAGCCAGCCACGTaGCATGCATGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: AQAAGATTIVARGHTPCTTQPAT*HAWSAG
Trigger: TCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGT...CGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACAGCGGGCCATACCGCTaGTGTTGTCTCCGACGGGCT +
Preference number: 4 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHSGPYR*CCLRRA
Trigger: AGCCCGTCGGAGACAACATCAGCGGTATGGCCCGCT...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGCACCGAGGCTGCGGTAGATaGCAGCATCAATGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: PGPGVLAPSLAPGSRGWHRGCGR*QHQWLG
Trigger: TCCTAGCCATTGATGCTGTCATCTACCGCAGCCTCG...GTGCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGGCCGGACGAGGAACTTaGGGACCGTCCCCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQAGRGT*GPSPPQ
Trigger: CTGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGC...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AGTCAGCTGGTGCCTCATCAGGGTCCGCAGGATCCAGGGCGCATGGCCCAGCGAGGCGTCCGGGCCCGCTaGCCACAAACACGGGATAGT +
Preference number: 4 (lower is better)
Translates to: SQLVPHQGPQDPGRMAQRGVRAR*PQTRDS
Trigger: ACTATCCCGTGTTTGTGGGCAGCGGGCCCGGACGCC...TCGCTGGGCCATGCGCCCTGGATCCTGCGGACCCTGATGAGGCACCAGCTGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTAGGGCAACATTGGCGTaGTTGGGGTCGTACGGGCAG +
Preference number: 4 (lower is better)
Translates to: QAAGATTIVARGHTPCTRRATLA*LGSYGQ
Trigger: CTGCCCGTACGACCCCAAGCACGCCAATGTTGCCCT...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGAGTCATGTTTCACGGTaGGCAGGGTGGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: THAHLPGPLHTNTARTRTSHVSR*AGWACP
Trigger: GGGACAGGCCCACCCTGCGCACCGTGAAACATGACT...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GACTTGAGCACCCACTCGGAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCCAGCCGAGCCAGGGATaGTGTTGCTGGGCGTGGAAA +
Preference number: 4 (lower is better)
Translates to: DLSTHSELPRAPAFWHRLQPSQG*CCWAWK
Trigger: TTTCCACGCCCAGCAACAGCATCCCTGGCTCGGCTG...GAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCTCAAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCAGCCGAGCCAGGGATaGTGTTGCTGGGCGTGGAAA +
Preference number: 4 (lower is better)
Translates to: THAHLPGPLHTNTARTRTQPSQG*CCWAWK
Trigger: TTTCCACGCCCAGCAACAGCATCCCTGGCTCGGCTG...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp ACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAATACACCCCGAGTACTaGTGGCAGCGAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: TPTSPAPCTRTRHAHARTIHPEY*WQRATG
Trigger: GCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTGTAT...TGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GGAGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTACCCCTAAGCCTGAGGTaGTGGCCCCGGACACGTCCT +
Preference number: 4 (lower is better)
Translates to: GGHKGTGGMGLSHHPGAVPLSLR*WPRTRP
Trigger: AGGACGTGTCCGGGGCCAGCACCTCAGGCTTAGGGG...TACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GGCCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGTTGGCCCAGCCGTTCTaGATCAGGGGCGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GPPRVSCLKPRHCPRFPLLAQPF*IRGASR
Trigger: CCTGCTGGCGCCCCTGATGCAGAACGGCTGGGCCAA...CAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACAGGGCGAGCTGGTTGTaGTTCCTTGTGGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHRASWL*FLVAEG
Trigger: CCCCTCCGCCACAAGGAAGCACAACCAGCTCGCCCT...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCACAAGCCTCCCCTGCCTaGCGCCACCCCGAGAACGGA +
Preference number: 4 (lower is better)
Translates to: PSSCLLPETPALSPLPSAQASPA*RHPENG
Trigger: TCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTTG...TGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGCCAGCCACGTGGCATaGATGGTCAGCTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: QAAGATTIVARGHTPCTRASHVA*MVSWRS
Trigger: TGACCTCCAGCTGACCATGCATGCCACGTGGCTGGC...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGACCCGCAGGACTCGCTaGATGTTGAGGTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRTRRTR*MLRSSA
Trigger: TGCTGACGACCTCAACATCCAGCGAGTCCTGCGGGT...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGACCCGCAGGACTCGCTaGATGTTGAGGTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: AQAAGATTIVARGHTPCTTRRTR*MLRSSA
Trigger: TGCTGACGACCTCAACATCCAGCGAGTCCTGCGGGT...CGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AGGGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGCAGCTCCGTGGACGTaGGGGGCTCCAGCTCTACGC +
Preference number: 4 (lower is better)
Translates to: RAEDPASHVACMVSWRSEAAPWT*GAPALR
Trigger: GCGTAGAGCTGGAGCCCCCCACGTCCACGGAGCTGC...CTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTCAGGTCAGCTTCCTCTaGTACCGCAGCTCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: QAAGATTIVARGHTPCTRQVSFL*YRSSVD
Trigger: GTCCACGGAGCTGCGGTACCAGAGGAAGCTGACCTG...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGCGCACACAAAGAGCGTaGACTCGTCCCGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRRTQRA*TRPEGA
Trigger: TGCTCCTTCGGGACGAGTCCACGCTCTTTGTGTGCG...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACCGCACACAAAGAGCGTaGACTCGTCCCGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHRTQRA*TRPEGA
Trigger: TGCTCCTTCGGGACGAGTCCACGCTCTTTGTGTGCG...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp ACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTGCCACTCGAGTCAGCTaGTGCCTCATCAGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: TRTRHAHARTPTHARGLGATRVS*CLIRVR
Trigger: GCGGACCCTGATGAGGCACCAGCTGACTCGAGTGGC...ACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACACGTCCCTGAGGTGCTaGCATTGGGCCGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHTSLRC*HWAGRG
Trigger: TCCTCGTCCGGCCCAATGCCAGCACCTCAGGGACGT...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACCTAAGCCTGAGGTGCTaGCCCCGGACACGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHLSLRC*PRTRPA
Trigger: AGCAGGACGTGTCCGGGGCCAGCACCTCAGGCTTAG...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGCCCCCAGCCCTGCCCTaGCCTTCTGGCTCAGGGATT +
Preference number: 4 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGPPALP*PSGSGI
Trigger: AATCCCTGAGCCAGAAGGCCAGGGCAGGGCTGGGGG...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586582.6
CDS-3UTR CCA 90 bp GGCCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCCTGGTTCCCGTGGCTaGCACTGCCAAGGCATCGGG +
Preference number: 4 (lower is better)
Translates to: GPPRVSCLKPRHCPRFPLPGSRG*HCQGIG
Trigger: CCCGATGCCTTGGCAGTGCCAGCCACGGGAACCAGG...CAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACTCACAAGGGGACGGGTaGCATGGGACTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHSQGDG*HGTLSP
Trigger: TGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGA...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp ACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAACCCAGCCAGCCACGTaGCATGCATGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TPTSPAPCTRTRHAHARTTQPAT*HAWSAG
Trigger: TCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGT...TGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGGGACTCGCTGGATGTTaGGGTCGTCAGCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGGLAGC*GRQHLL
Trigger: CAGAAGGTGCTGACGACCTCAACATCCAGCGAGTCC...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp ACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAGGACTCGCTGGATGTTaGGGTCGTCAGCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: TPTSPAPCTRTRHAHARTGLAGC*GRQHLL
Trigger: CAGAAGGTGCTGACGACCTCAACATCCAGCGAGTCC...TGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp GCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGAGGCTGCGGTAGATaGCAGCATCAATGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: AQAAGATTIVARGHTPCTRGCGR*QHQWLG
Trigger: TCCTAGCCATTGATGCTGTCATCTACCGCAGCCTCG...CGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGCGAGGCTGCGGTAGATaGCAGCATCAATGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRRGCGR*QHQWLG
Trigger: TCCTAGCCATTGATGCTGTCATCTACCGCAGCCTCG...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp GGAGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTAGGCGACAGGAGGAGGTaGCGCCAGAAAGGGGTACAG +
Preference number: 4 (lower is better)
Translates to: GGHKGTGGMGLSHHPGAVGDRRR*RQKGVQ
Trigger: CTGTACCCCTTTCTGGCGTCACCTCCTCCTGTCGCC...TACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586582.6
CDS-3UTR TCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTCGAACCAGCCCACGCTaGAGCCGGACACCACGGCTC +
Preference number: 4 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIRTSPR*SRTPRL
Trigger: GAGCCGTGGTGTCCGGCTTCAGCGTGGGCTGGTTCG...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACAGTCATGTTTCACGGTaGGCAGGGTGGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHSHVSR*AGWACP
Trigger: GGGACAGGCCCACCCTGCGCACCGTGAAACATGACT...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCAGAAGTAGACATGGCTaGCCCACTCCACCGCATGGA +
Preference number: 4 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARRSRHG*PTPPHG
Trigger: TCCATGCGGTGGAGTGGGGCAGCCATGTCTACTTCT...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GGAGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTACTGGAGGCATTGTACTaGATCCCGGGGGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: GGHKGTGGMGLSHHPGAVLEALY*IPGAAQ
Trigger: CTGCGCAGCCCCCGGGATGCAGTACAATGCCTCCAG...TACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGGCCCCGGACACGTCCTaGTCAAAGGCGGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQAPDTS*SKAALV
Trigger: CACCAGAGCCGCCTTTGAGCAGGACGTGTCCGGGGC...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GGAGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTAAGGGCGAGCTGGTTGTaGTTCCTTGTGGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GGHKGTGGMGLSHHPGAVRASWL*FLVAEG
Trigger: CCCCTCCGCCACAAGGAAGCACAACCAGCTCGCCCT...TACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTCGTCCAAGCCTCCCCTaGCTGCCGCCACCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIRPSLP*LPPPRE
Trigger: TTCTCGGGGTGGCGGCAGGCAGGGGAGGCTTGGACG...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAACCTCCCCGGCCCCTTaGACACGAACACGGCACGCA +
Preference number: 4 (lower is better)
Translates to: PSSCLLPETPALSPLPSATSPAP*TRTRHA
Trigger: TGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGT...TGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACACCCACCTCCTCGTGTCTCCTaGCTGAAACCCCGGCATTGT +
Preference number: 4 (lower is better)
Translates to: PPPRPLAHEHGTHTHAHPPPRVS*LKPRHC
Trigger: ACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG...TGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCACCGACGACGTTACCAGCAGGTTCACCGACACCAGCCCCGCGCGGTCCTCGGCCTCCTCGTGTCTCCTaGCTGAAACCCCGGCATTGT +
Preference number: 4 (lower is better)
Translates to: PPTTLPAGSPTPAPRGPRPPRVS*LKPRHC
Trigger: ACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG...CCGAGGACCGCGCGGGGCTGGTGTCGGTGAACCTGCTGGTAACGTCGTCGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp CACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTTGGGGAGCCTTTAGACAGCTGCTaGCGATGTGACTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: HGTHTHAHPHTPGAWVGEPLDSC*RCDFRA
Trigger: TGCCCGGAAGTCACATCGGCAGCAGCTGTCTAAAGG...CTCCCCAACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGAGCCCTTTAGACAGCTaGTGCCGATGTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRSPLDS*CRCDFR
Trigger: CCGGAAGTCACATCGGCAGCAGCTGTCTAAAGGGCT...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCGGGGTCGAGGCACCTGATCCTCCGGCACCGGCGTCCAGATGGACTCGGGGGAAGCCCTTTAGACAGCTaGTGCCGATGTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: PGSRHLILRHRRPDGLGGSPLDS*CRCDFR
Trigger: CCGGAAGTCACATCGGCAGCAGCTGTCTAAAGGGCT...TCCCCCGAGTCCATCTGGACGCCGGTGCCGGAGGATCAGGTGCCTCGACCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGACCCGCAGGACTCGCTaGATGTTGAGGTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVTRRTR*MLRSSA
Trigger: TGCTGACGACCTCAACATCCAGCGAGTCCTGCGGGT...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GCTGGCATTGGGCCGGACGAGGAACTTGAGGACCGTCCCCGCCTCAGAACCCAGGCACCGGCGTCCAGATaGACTCGGGGGACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: AGIGPDEELEDRPRLRTQAPASR*TRGTSA
Trigger: AGCAGAAGTCCCCCGAGTCCATCTGGACGCCGGTGC...CTGGGTTCTGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGCCCAATGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGCATCCGGCAAGGCGCTaGAGGCATTGTACTGCATCC +
Preference number: 4 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGHPARR*RHCTAS
Trigger: GGATGCAGTACAATGCCTCCAGCGCCTTGCCGGATG...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AGTCAGCTGGTGCCTCATCAGGGTCCGCAGGATCCAGGGCGCATGGCCCAGCGAAGGAAGACAACGGTCTaGTTGCCCCAGGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: SQLVPHQGPQDPGRMAQRRKTTV*LPQGPA
Trigger: AGCCGGCCCCTGGGGCAACCAGACCGTTGTCTTCCT...TCGCTGGGCCATGCGCCCTGGATCCTGCGGACCCTGATGAGGCACCAGCTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp GGCCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCTAAGCCTGAGGTGCTaGCCCCGGACACGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GPPRVSCLKPRHCPRFPLLSLRC*PRTRPA
Trigger: AGCAGGACGTGTCCGGGGCCAGCACCTCAGGCTTAG...CAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGCACGATCGTCGCTCGTaGACACACACCCTGCACGCG +
Preference number: 4 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGHDRRS*THTLHA
Trigger: CGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTG...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGCAGCCTCGTCCTTCTaGGAAGTATTGGGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARAASSF*EVLGKL
Trigger: GAGCTTGCCCAATACTTCCCAGAAGGACGAGGCTGC...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586582.6
CDS-3UTR CCA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGGCAGCAGCGTGGCCTTaGCCCAGCCGTTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGAAAWP*PSRSAS
Trigger: TGATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGC...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTCCGCTGTTGAACGTGTaGGTGCGGCGCAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIPLLNV*VRRRVA
Trigger: CGCCACCCTGCGCCGCACCCACACGTTCAACAGCGG...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GGCCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCGCTCCTGGTTCCCGTaGCTGGCACTGCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: GPPRVSCLKPRHCPRFPLRSWFP*LALPRH
Trigger: ATGCCTTGGCAGTGCCAGCCACGGGAACCAGGAGCG...CAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGGGGCCTGATCATGGCTaGAAAGGAGGCCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGGPDHG*KGGPSP
Trigger: TGGAGAAGGGCCTCCTTTCCAGCCATGATCAGGCCC...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CAA 72 bp AAGTTGAGGATGTCATCCGGCAAGGCGCTGGAGGCATaGTACTGCATCCCGGGGGCTGCGCAGCACCCGGGC +
Preference number: 4 (lower is better)
Translates to: KLRMSSGKALEA*YCIPGAAQHPG
Trigger: GCCCGGGTGCTGCGCAGCCCCCGGGATGCAGTACAATGCCTCCAGCGCCTTGCCGGATGACATCCTCAACTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677828.1
3UTR CAA 72 bp AAGACACTGAGCCCAGACGTCCCTGAGGTGCTGGCATaGGGCCGGACGAGGAACTTGAGGACCGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: KTLSPDVPEVLA*GRTRNLRTVPA
Trigger: GGCGGGGACGGTCCTCAAGTTCCTCGTCCGGCCCAATGCCAGCACCTCAGGGACGTCTGGGCTCAGTGTCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR TCA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACGGACTCGCTGGATGTTaGGGTCGTCAGCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHGLAGC*GRQHLL
Trigger: CAGAAGGTGCTGACGACCTCAACATCCAGCGAGTCC...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGCAGCCTGCAGCACGTTaGAGTAGAAATGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVQPAAR*SRNGSL
Trigger: GAGACTCCCATTTCTACTTCAACGTGCTGCAGGCTG...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp AAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTACAGAGGCCGGACGAGGAACTTaGGGACCGTCCCCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KGTGGMGLSHHPGAVFTEAGRGT*GPSPPQ
Trigger: CTGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGC...CTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGTCCCGGAGCCCCGAATaGGAAGTTCAGCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGSRSPE*EVQQPR
Trigger: ACGAGGCTGCTGAACTTCTCATTCGGGGCTCCGGGA...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586582.6
CDS-3UTR GCA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTAGAAGTAGACATGGCTaGCCCACTCCACCGCATGGA +
Preference number: 4 (lower is better)
Translates to: QAAGATTIVARGHTPCTRRSRHG*PTPPHG
Trigger: TCCATGCGGTGGAGTGGGGCAGCCATGTCTACTTCT...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTAGACAACGGTCTGGTTaGCCCAGGGGCCGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIRQRSG*PRGRLP
Trigger: TGGGAGCCGGCCCCTGGGGCAACCAGACCGTTGTCT...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GCTGGCATTGGGCCGGACGAGGAACTTGAGGACCGTCCCCGCCTCAGAACCCAGATACACCCCGAGTACTaGTGGCAGCGAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: AGIGPDEELEDRPRLRTQIHPEY*WQRATG
Trigger: GCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTGTAT...CTGGGTTCTGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGCCCAATGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGCGTGGACACACACCCTaGACGCGTGGCCCACTTGAC +
Preference number: 4 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQRGHTP*TRGPLD
Trigger: GTCAAGTGGGCCACGCGTGCAGGGTGTGTGTCCACG...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGGTCCTTTAGACAGCTGCTaGCGATGTGACTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: AGSRAHGPARAPPRPSEGPLDSC*RCDFRA
Trigger: TGCCCGGAAGTCACATCGGCAGCAGCTGTCTAAAGG...ACCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp ACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTCGCACACAAAGAGCGTaGACTCGTCCCGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TRTRHAHARTPTHARGLGRTQRA*TRPEGA
Trigger: TGCTCCTTCGGGACGAGTCCACGCTCTTTGTGTGCG...ACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGAGAAGAGGGCAACATTaGCGTGCTTGGGGTCGTACG +
Preference number: 4 (lower is better)
Translates to: THAHLPGPLHTNTARTRTRRGQH*RAWGRT
Trigger: CGTACGACCCCAAGCACGCCAATGTTGCCCTCTTCT...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AGGGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGCACCGGCGTCCAGATaGACTCGGGGGACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RAEDPASHVACMVSWRSEAPASR*TRGTSA
Trigger: AGCAGAAGTCCCCCGAGTCCATCTGGACGCCGGTGC...CTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAAAGGATCCAGGGCGCATaGCCCAGCGAGGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLERIQGA*PSEGTA
Trigger: GGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCT...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AGGGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGAGGGGACGGGTGGCATaGGACTCTCTCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: RAEDPASHVACMVSWRSERGRVA*DSLTTL
Trigger: CAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCT...CTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp ACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTTCACAAGGGGACGGGTaGCATGGGACTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: TRTRHAHARTPTHARGLGSQGDG*HGTLSP
Trigger: TGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGA...ACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GGCCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGGCCACGTGGCATGCATaGTCAGCTGGAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GPPRVSCLKPRHCPRFPLATWHA*SAGGQR
Trigger: CCTCTGACCTCCAGCTGACCATGCATGCCACGTGGC...CAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGGCCACGTGGCATGCATaGTCAGCTGGAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGATWHA*SAGGQR
Trigger: CCTCTGACCTCCAGCTGACCATGCATGCCACGTGGC...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTGGCGCACACCGGGTTaGAGGCGTTGGAACCGCACA +
Preference number: 4 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIWRTPG*RRWNRT
Trigger: TGTGCGGTTCCAACGCCTTCAACCCGGTGTGCGCCA...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAAGAGCCCAGACGTCCCTaGGGTGCTGGCATTGGGCCG +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLEEPRRP*GAGIGP
Trigger: CGGCCCAATGCCAGCACCTCAGGGACGTCTGGGCTC...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTCTCGTGTCTCCTGCCTaGAACCCCGGCATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRILVSPA*NPGIVP
Trigger: GGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAG...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAATACACCCCGAGTACTaGTGGCAGCGAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: PSSCLLPETPALSPLPSAIHPEY*WQRATG
Trigger: GCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTGTAT...TGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTAGGGCGAGCTGGTTGTaGTTCCTTGTGGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIRASWL*FLVAEG
Trigger: CCCCTCCGCCACAAGGAAGCACAACCAGCTCGCCCT...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAACAAGCCTCCCCTGCCTaGCGCCACCCCGAGAACGGA +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLEQASPA*RHPENG
Trigger: TCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTTG...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AGGGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGCAGGTCAGCTTCCTCTaGTACCGCAGCTCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: RAEDPASHVACMVSWRSEQVSFL*YRSSVD
Trigger: GTCCACGGAGCTGCGGTACCAGAGGAAGCTGACCTG...CTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GGCCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCATCCGGCAAGGCGCTaGAGGCATTGTACTGCATCC +
Preference number: 4 (lower is better)
Translates to: GPPRVSCLKPRHCPRFPLHPARR*RHCTAS
Trigger: GGATGCAGTACAATGCCTCCAGCGCCTTGCCGGATG...CAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGTCGTCCATCAGAGGGTaGGTCTTGACAAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVSSIRG*VLTKLR
Trigger: CCTCAACTTTGTCAAGACCCACCCTCTGATGGACGA...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTCACCCCGAGTACTGCTaGCAGCGAGCCACAGGCACT +
Preference number: 4 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIHPEYC*QRATGT
Trigger: AGTGCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTG...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTAGGGGGAGGGCGAGCTaGTTGTGCTTCCTTGTGGCG +
Preference number: 4 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIRGRAS*LCFLVA
Trigger: CGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCT...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AGTCAGCTGGTGCCTCATCAGGGTCCGCAGGATCCAGGGCGCATGGCCCAGCGATCACAAGGGGACGGGTaGCATGGGACTCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: SQLVPHQGPQDPGRMAQRSQGDG*HGTLSP
Trigger: TGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGA...TCGCTGGGCCATGCGCCCTGGATCCTGCGGACCCTGATGAGGCACCAGCTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp AGGGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGACCCAGCCAGCCACGTaGCATGCATGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RAEDPASHVACMVSWRSETQPAT*HAWSAG
Trigger: TCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGT...CTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAAGGCGTCCGGGCCCGCTaGCCACAAACACGGGATAGT +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLEGVRAR*PQTRDS
Trigger: ACTATCCCGTGTTTGTGGGCAGCGGGCCCGGACGCC...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGACTCGCCCTCCTGTTTaGCCTTCATCCGACACACGT +
Preference number: 4 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGTRPPV*PSSDTR
Trigger: ACGTGTGTCGGATGAAGGGCAAACAGGAGGGCGAGT...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTACAGAGAGGAAGGACGTCCACTaGTTCTCCAGCACGCGGGGG +
Preference number: 4 (lower is better)
Translates to: KGTGGMGLSHHPGAVFTERKDVH*FSSTRG
Trigger: CCCCCGCGTGCTGGAGAAGCAGTGGACGTCCTTCCT...CTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACACCCAGCCTTCAAACACAGCTaGCACCTGTGTCAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: PPPRPLAHEHGTHTHAHPAFKHS*HLCQVK
Trigger: TTTGACCTGACACAGGTGGCAGCTGTGTTTGAAGGC...TGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTGACTCGGGGGACTTCTaGTCTCGGAAGCGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIDSGDF*SRKRPS
Trigger: TGAAGGCCGCTTCCGAGAGCAGAAGTCCCCCGAGTC...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp CAGTTCTTCATACACCCCGAGTACTGCTGGCAGCGAGCCACAGGCACTCGGACCCTGGAGGCATTGTACTaGATCCCGGGGGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: QFFIHPEYCWQRATGTRTLEALY*IPGAAQ
Trigger: CTGCGCAGCCCCCGGGATGCAGTACAATGCCTCCAG...GGTCCGAGTGCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTGTATGAAGAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGAGTAGGGGTCCTGACTaGCGATACAGTTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVSRGPD*RYSSSY
Trigger: GTATGAAGAACTGTATCGGCAGTCAGGACCCCTACT...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp ACCCGGGCCGGGGTCGAGGCACCTGATCCTCCGGCACCGGCGTCCAGATGGACTAGTAGGGGTCCTGACTaGCGATACAGTTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: TRAGVEAPDPPAPASRWTSRGPD*RYSSSY
Trigger: GTATGAAGAACTGTATCGGCAGTCAGGACCCCTACT...AGTCCATCTGGACGCCGGTGCCGGAGGATCAGGTGCCTCGACCCCGGCCCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp CAGGGTCCGCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATCCGAGAACGGAGTTGTaGAATTGGTTAGAAAACCGC +
Preference number: 4 (lower is better)
Translates to: QGPQDPGRMAQRGHRLVHPRTEL*NWLENR
Trigger: GCGGTTTTCTAACCAATTGCACAACTCCGTTCTCGG...ATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGCGGACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGCCTTTAGACAGCTGCTaGCGATGTGACTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGPLDSC*RCDFRA
Trigger: TGCCCGGAAGTCACATCGGCAGCAGCTGTCTAAAGG...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTTCGTCCATCAGAGGGTaGGTCTTGACAAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QAAGATTIVARGHTPCTRSSIRG*VLTKLR
Trigger: CCTCAACTTTGTCAAGACCCACCCTCTGATGGACGA...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGTCGTCCATCAGAGGGTaGGTCTTGACAAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: THAHLPGPLHTNTARTRTSSIRG*VLTKLR
Trigger: CCTCAACTTTGTCAAGACCCACCCTCTGATGGACGA...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTACAGAGAGGAAGACAACGGTCTaGTTGCCCCAGGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: KGTGGMGLSHHPGAVFTERKTTV*LPQGPA
Trigger: AGCCGGCCCCTGGGGCAACCAGACCGTTGTCTTCCT...CTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AGTCAGCTGGTGCCTCATCAGGGTCCGCAGGATCCAGGGCGCATGGCCCAGCGAACTCTCTCACCACCCTaGGGCCGTATTTACAGAGGG +
Preference number: 4 (lower is better)
Translates to: SQLVPHQGPQDPGRMAQRTLSPP*GRIYRG
Trigger: CCCTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGT...TCGCTGGGCCATGCGCCCTGGATCCTGCGGACCCTGATGAGGCACCAGCTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR TCA 90 bp GGAGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTACAGCCTGCAGCACGTTaGAGTAGAAATGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GGHKGTGGMGLSHHPGAVQPAAR*SRNGSL
Trigger: GAGACTCCCATTTCTACTTCAACGTGCTGCAGGCTG...TACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAACTCGTGTCTCCTGCCTaGAACCCCGGCATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLELVSPA*NPGIVP
Trigger: GGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAG...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp GGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATCAGAGGGTGGGTCTTGACAACCACCAGGTGTATCTaGCTTCCAACTCAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GAWPSEGTASSIRGWVLTTTRCI*LPTQVP
Trigger: AGGGACTTGAGTTGGAAGTCAGATACACCTGGTGGT...TGTCAAGACCCACCCTCTGATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp CAGTTCTTCATACACCCCGAGTACTGCTGGCAGCGAGCCACAGGCACTCGGACCAGGGCAACATTGGCGTaGTTGGGGTCGTACGGGCAG +
Preference number: 4 (lower is better)
Translates to: QFFIHPEYCWQRATGTRTRATLA*LGSYGQ
Trigger: CTGCCCGTACGACCCCAAGCACGCCAATGTTGCCCT...GGTCCGAGTGCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTGTATGAAGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR GCA 90 bp AAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTACAGAGGACTCGGGGGACTTCTaGTCTCGGAAGCGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: KGTGGMGLSHHPGAVFTEDSGDF*SRKRPS
Trigger: TGAAGGCCGCTTCCGAGAGCAGAAGTCCCCCGAGTC...CTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAACTGGAGGCATTGTACTaGATCCCGGGGGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLELEALY*IPGAAQ
Trigger: CTGCGCAGCCCCCGGGATGCAGTACAATGCCTCCAG...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAACCCGCAGGAGTCCTGTaGAGTCCCCTAAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLEPAGVL*SPLSLR
Trigger: CCTCAGGCTTAGGGGACTGCACAGGACTCCTGCGGG...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGAGAAGAGGGCAACATTaGCGTGCTTGGGGTCGTACG +
Preference number: 4 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQRRGQH*RAWGRT
Trigger: CGTACGACCCCAAGCACGCCAATGTTGCCCTCTTCT...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAACACCCCGAGTACTGCTaGCAGCGAGCCACAGGCACT +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLEHPEYC*QRATGT
Trigger: AGTGCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTG...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAACGCTCCTGGTTCCCGTaGCTGGCACTGCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLERSWFP*LALPRH
Trigger: ATGCCTTGGCAGTGCCAGCCACGGGAACCAGGAGCG...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGACTCTCTCACCACCCTaGGGCCGTATTTACAGAGGG +
Preference number: 4 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQTLSPP*GRIYRG
Trigger: CCCTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGT...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAAAGGGGACGGGTGGCATaGGACTCTCTCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLERGRVA*DSLTTL
Trigger: CAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCT...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCCAAAGTAAGGCTCTTTaGACCACTTGGAGTCATGTT +
Preference number: 4 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARQSKAL*TTWSHV
Trigger: AACATGACTCCAAGTGGTTCAAAGAGCCTTACTTTG...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAAAGGGCAACATTGGCGTaGTTGGGGTCGTACGGGCAG +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLERATLA*LGSYGQ
Trigger: CTGCCCGTACGACCCCAAGCACGCCAATGTTGCCCT...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GGAGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTAGCCTTCAAACACAGCTaGCACCTGTGTCAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: GGHKGTGGMGLSHHPGAVAFKHS*HLCQVK
Trigger: TTTGACCTGACACAGGTGGCAGCTGTGTTTGAAGGC...TACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTAGCCCTTTAGACAGCTaGTGCCGATGTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRISPLDS*CRCDFR
Trigger: CCGGAAGTCACATCGGCAGCAGCTGTCTAAAGGGCT...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGCCTTCTGGGAAGTATTaGGCAAGCTCCGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQPSGKY*ASSEPI
Trigger: AATGGGCTCGGAGCTTGCCCAATACTTCCCAGAAGG...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586582.6
CDS-3UTR TCA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCAAAGTAAGGCTCTTTaGACCACTTGGAGTCATGTT +
Preference number: 4 (lower is better)
Translates to: THAHLPGPLHTNTARTRTQSKAL*TTWSHV
Trigger: AACATGACTCCAAGTGGTTCAAAGAGCCTTACTTTG...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTACAGAGACTCGCCCTCCTGTTTaGCCTTCATCCGACACACGT +
Preference number: 4 (lower is better)
Translates to: KGTGGMGLSHHPGAVFTETRPPV*PSSDTR
Trigger: ACGTGTGTCGGATGAAGGGCAAACAGGAGGGCGAGT...CTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTACAGAGAGAAGTAGACATGGCTaGCCCACTCCACCGCATGGA +
Preference number: 4 (lower is better)
Translates to: KGTGGMGLSHHPGAVFTERSRHG*PTPPHG
Trigger: TCCATGCGGTGGAGTGGGGCAGCCATGTCTACTTCT...CTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp GGCCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCCGAGAACGGAGTTGTaGAATTGGTTAGAAAACCGC +
Preference number: 4 (lower is better)
Translates to: GPPRVSCLKPRHCPRFPLPRTEL*NWLENR
Trigger: GCGGTTTTCTAACCAATTGCACAACTCCGTTCTCGG...CAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTACAGAGAGAAGAGGGCAACATTaGCGTGCTTGGGGTCGTACG +
Preference number: 4 (lower is better)
Translates to: KGTGGMGLSHHPGAVFTERRGQH*RAWGRT
Trigger: CGTACGACCCCAAGCACGCCAATGTTGCCCTCTTCT...CTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAACATCCGGCAAGGCGCTaGAGGCATTGTACTGCATCC +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLEHPARR*RHCTAS
Trigger: GGATGCAGTACAATGCCTCCAGCGCCTTGCCGGATG...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CAGTTCTTCATACACCCCGAGTACTGCTGGCAGCGAGCCACAGGCACTCGGACCCAGCCTGCAGCACGTTaGAGTAGAAATGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: QFFIHPEYCWQRATGTRTQPAAR*SRNGSL
Trigger: GAGACTCCCATTTCTACTTCAACGTGCTGCAGGCTG...GGTCCGAGTGCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTGTATGAAGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAAACTCTCTCACCACCCTaGGGCCGTATTTACAGAGGG +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLETLSPP*GRIYRG
Trigger: CCCTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGT...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTAGTAGGGGTCCTGACTaGCGATACAGTTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRISRGPD*RYSSSY
Trigger: GTATGAAGAACTGTATCGGCAGTCAGGACCCCTACT...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR TCA 90 bp CCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCACAAAGTAAGGCTCTTTaGACCACTTGGAGTCATGTT +
Preference number: 4 (lower is better)
Translates to: PSSCLLPETPALSPLPSAQSKAL*TTWSHV
Trigger: AACATGACTCCAAGTGGTTCAAAGAGCCTTACTTTG...TGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAAGCCTTCAAACACAGCTaGCACCTGTGTCAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLEAFKHS*HLCQVK
Trigger: TTTGACCTGACACAGGTGGCAGCTGTGTTTGAAGGC...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR GCA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAACCGAGAACGGAGTTGTaGAATTGGTTAGAAAACCGC +
Preference number: 4 (lower is better)
Translates to: KPPLPAATPRTELCNWLEPRTEL*NWLENR
Trigger: GCGGTTTTCTAACCAATTGCACAACTCCGTTCTCGG...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CACCGCCTCGCCCGCCCCGTGCGCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCGGGCCTCGCCGCTGTaGAACGTGTGGGTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: HRLARPVRQDGLLVLAPGRASPL*NVWVRR
Trigger: GCGCCGCACCCACACGTTCAACAGCGGCGAGGCCCG...GCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGCGGTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CAA 90 bp CCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGCATGGCCTCCTTGTCCTaGCGCCGGGCCAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PGWPPCPCAGPAPAAHGGMASLS*RRASSR
Trigger: GCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCAT...GCCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CAA 90 bp CCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGCGCCAGGATGGCCTCCTaGTCCTTGCGCCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PGWPPCPCAGPAPAAHGGARMAS*SLRRAS
Trigger: GCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGC...GCCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CAA 90 bp CACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAGCACCCACTCGGAGTaGCCCCGGGCCCCGGCGTTC +
Preference number: 5 (lower is better)
Translates to: HAHLPGPLHTNTARTRTHSTHSE*PRAPAF
Trigger: GAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCT...GTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CACCGCCTCGCCCGCCCCGTGCGCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCTTGGCGCACACCGGGTaGAAGGCGTTGGAACCGCAC +
Preference number: 5 (lower is better)
Translates to: HRLARPVRQDGLLVLAPGLAHTG*KALEPH
Trigger: GTGCGGTTCCAACGCCTTCAACCCGGTGTGCGCCAA...GCCCGGCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGCGGGCGAGGCGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CAA 90 bp GCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGATGGCCTCCTTGTCCTaGCGCCGGGCCAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: AQAAGATTIVARGHTPCTMASLS*RRASSR
Trigger: GCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCAT...CGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp GGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGATGGCCTCCTTGTCCTaGCGCCGGGCCAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: GRWGHHDRRSWTHTLHAWMASLS*RRASSR
Trigger: GCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCAT...CCACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTCGGGCCTCGCCGCTGTaGAACGTGTGGGTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: QAAGATTIVARGHTPCTRRASPL*NVWVRR
Trigger: GCGCCGCACCCACACGTTCAACAGCGGCGAGGCCCG...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGCGGGCCTCGCCGCTGTaGAACGTGTGGGTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVRASPL*NVWVRR
Trigger: GCGCCGCACCCACACGTTCAACAGCGGCGAGGCCCG...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGAGCACCCACTCGGAGTaGCCCCGGGCCCCGGCGTTC +
Preference number: 5 (lower is better)
Translates to: THAHLPGPLHTNTARTRTSTHSE*PRAPAF
Trigger: GAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCT...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCCACCTCCCCGGCCCCTaGCACACGAACACGGCACGC +
Preference number: 5 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARHLPGP*HTNTAR
Trigger: GCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTG...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp GCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCACCTCCCCGGCCCCTaGCACACGAACACGGCACGC +
Preference number: 5 (lower is better)
Translates to: AQAAGATTIVARGHTPCTHLPGP*HTNTAR
Trigger: GCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTG...CGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAAGACAACGGTCTGGTaGCCCCAGGGGCCGGCTCCC +
Preference number: 5 (lower is better)
Translates to: HAHLPGPLHTNTARTRTHKTTVW*PQGPAP
Trigger: GGGAGCCGGCCCCTGGGGCAACCAGACCGTTGTCTT...GTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGAAGACAACGGTCTGGTaGCCCCAGGGGCCGGCTCCC +
Preference number: 5 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVKTTVW*PQGPAP
Trigger: GGGAGCCGGCCCCTGGGGCAACCAGACCGTTGTCTT...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp GCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGGGCCGGACGAGGAACTaGAGGACCGTCCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: AQAAGATTIVARGHTPCTGRTRN*RTVPAS
Trigger: TGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGCC...CGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CAGGGTCCGCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATGGCCGGACGAGGAACTaGAGGACCGTCCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: QGPQDPGRMAQRGHRLVHGRTRN*RTVPAS
Trigger: TGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGCC...ATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGCGGACCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CAA 90 bp GCTTCTGCGGCAGCGGCGTCTGCTCGGGCGTGGGCAGCAGCCCCGAGTCCAGGTGCACGCGTGGCCCACTaGACACACACGCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: ASAAAASARAWAAAPSPGARVAH*THTPTA
Trigger: TGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGC...ACCTGGACTCGGGGCTGCTGCCCACGCCCGAGCAGACGCCGCTGCCGCAGAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CAA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGGCCGGACGAGGAACTaGAGGACCGTCCCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVGRTRN*RTVPAS
Trigger: TGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGCC...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGGCACGCGTGGCCCACTaGACACACACGCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRARVAH*THTPTA
Trigger: TGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGC...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp GCTGGCATTGGGCCGGACGAGGAACTTGAGGACCGTCCCCGCCTCAGAACCCAGAGCACCCACTCGGAGTaGCCCCGGGCCCCGGCGTTC +
Preference number: 5 (lower is better)
Translates to: AGIGPDEELEDRPRLRTQSTHSE*PRAPAF
Trigger: GAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCT...CTGGGTTCTGAGGCGGGGACGGTCCTCAAGTTCCTCGTCCGGCCCAATGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CAA 90 bp CCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGGCTGGCACCACTCGCCCTCCTGTTaGCCCTTCATCCGACACACG +
Preference number: 5 (lower is better)
Translates to: PGPGVLAPSLAPGSRGWHHSPSC*PFIRHT
Trigger: CGTGTGTCGGATGAAGGGCAAACAGGAGGGCGAGTG...GTGCCAGCCACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp GGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGTTGGCGCACACCGGGTaGAAGGCGTTGGAACCGCAC +
Preference number: 5 (lower is better)
Translates to: GRWGHHDRRSWTHTLHAWLAHTG*KALEPH
Trigger: GTGCGGTTCCAACGCCTTCAACCCGGTGTGCGCCAA...CCACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGGCCATACCGCTGATGTaGTCTCCGACGGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LRPRVGGGRAGCASLWRRAIPLM*SPTGCR
Trigger: CCTGCAGCCCGTCGGAGACAACATCAGCGGTATGGC...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CAGGGTCCGCAGGATCCAGGGCGCATGGCCCAGCGAGGGCACCGCCTCGTCCATGCCATACCGCTGATGTaGTCTCCGACGGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QGPQDPGRMAQRGHRLVHAIPLM*SPTGCR
Trigger: CCTGCAGCCCGTCGGAGACAACATCAGCGGTATGGC...ATGGACGAGGCGGTGCCCTCGCTGGGCCATGCGCCCTGGATCCTGCGGACCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CAA 90 bp ACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAGCAACATTGGCGTGCTaGGGGTCGTACGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: TPTSPAPCTRTRHAHARTATLAC*GSYGQR
Trigger: CCGCTGCCCGTACGACCCCAAGCACGCCAATGTTGC...TGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACACCCAGCAACATTGGCGTGCTaGGGGTCGTACGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: PPPRPLAHEHGTHTHAHPATLAC*GSYGQR
Trigger: CCGCTGCCCGTACGACCCCAAGCACGCCAATGTTGC...TGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGCAACATTGGCGTGCTaGGGGTCGTACGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVATLAC*GSYGQR
Trigger: CCGCTGCCCGTACGACCCCAAGCACGCCAATGTTGC...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp GAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCTCGCTCCTGGTTCCCGTGAAGGCGCTGGAGGCATaGTACTGCATCCCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: ELPRAPAFWHRLSLLVPVKALEA*YCIPGA
Trigger: AGCCCCCGGGATGCAGTACAATGCCTCCAGCGCCTT...CACGGGAACCAGGAGCGAGAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp TGCTGGCAGCGAGCCACAGGCACTCGGACCACGCAGCGGGGGAAGGCAGCCAGCAAGGCGCTGGAGGCATaGTACTGCATCCCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: CWQRATGTRTTQRGKAASKALEA*YCIPGA
Trigger: AGCCCCCGGGATGCAGTACAATGCCTCCAGCGCCTT...GCTGGCTGCCTTCCCCCGCTGCGTGGTCCGAGTGCCTGTGGCTCGCTGCCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CAA 90 bp CACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACCCTGAGGTGCTGGCATaGGGCCGGACGAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: HAHLPGPLHTNTARTRTHPEVLA*GRTRNL
Trigger: CAAGTTCCTCGTCCGGCCCAATGCCAGCACCTCAGG...GTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp ACACACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGTGCAGCAGCGTGGCCTaGGCCCAGCCGTTCTGCATC +
Preference number: 5 (lower is better)
Translates to: THAHLPGPLHTNTARTRTCSSVA*AQPFCI
Trigger: GATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGCA...CGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGGAGGGCGAGCTGGTaGTGCTTCCTTGTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: QAAGATTIVARGHTPCTRGRASW*CFLVAE
Trigger: CTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCC...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACCCTGAAACCCCGGCATaGTCCCCGCTTCCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHPETPA*SPLPSA
Trigger: TGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGG...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCCACTCGCCCTCCTGTTaGCCCTTCATCCGACACACG +
Preference number: 5 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARHSPSC*PFIRHT
Trigger: CGTGTGTCGGATGAAGGGCAAACAGGAGGGCGAGTG...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTAAGGCGCTGGAGGCATaGTACTGCATCCCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: QAAGATTIVARGHTPCTRKALEA*YCIPGA
Trigger: AGCCCCCGGGATGCAGTACAATGCCTCCAGCGCCTT...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGCCTGAGGTGCTGGCATaGGGCCGGACGAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGPEVLA*GRTRNL
Trigger: CAAGTTCCTCGTCCGGCCCAATGCCAGCACCTCAGG...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGCCTGAGGTGCTGGCATaGGGCCGGACGAGGAACTTG +
Preference number: 5 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVPEVLA*GRTRNL
Trigger: CAAGTTCCTCGTCCGGCCCAATGCCAGCACCTCAGG...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp AGGGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGCCAGGATGGCCTCCTaGTCCTTGCGCCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RAEDPASHVACMVSWRSEARMAS*SLRRAS
Trigger: GCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGC...CTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGCCTGAAACCCCGGCATaGTCCCCGCTTCCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGPETPA*SPLPSA
Trigger: TGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGG...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp GACTTGAGCACCCACTCGGAGTTGCCCCGGGCCCCGGCGTTCTGGCACCGTCTCCCTGAAACCCCGGCATaGTCCCCGCTTCCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: DLSTHSELPRAPAFWHRLPETPA*SPLPSA
Trigger: TGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGG...GAGACGGTGCCAGAACGCCGGGGCCCGGGGCAACTCCGAGTGGGTGCTCAAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp AGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGATGAACAGCGTCCTGTaGACCCGCAGGACTCGCTGG +
Preference number: 5 (lower is better)
Translates to: RPLGPPRSSLVDTHPARVMNSVL*TRRTRW
Trigger: CCAGCGAGTCCTGCGGGTCAACAGGACGCTGTTCAT...CACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCACCGGGTTGAAGGCGTaGGAACCGCACACAAAGAGC +
Preference number: 5 (lower is better)
Translates to: PRPLGPPRSSLVDTHPARTGLKA*EPHTKS
Trigger: GCTCTTTGTGTGCGGTTCCAACGCCTTCAACCCGGT...GCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACACCGGGTTGAAGGCGTaGGAACCGCACACAAAGAGC +
Preference number: 5 (lower is better)
Translates to: HAHLPGPLHTNTARTRTHTGLKA*EPHTKS
Trigger: GCTCTTTGTGTGCGGTTCCAACGCCTTCAACCCGGT...GTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CTGCGGCCCCGGGTAGGGGGAGGGCGAGCTGGTTGTGCTTCCTTGTGGCGGAGGGAGAAGAGGGCAACATaGGCGTGCTTGGGGTCGTAC +
Preference number: 5 (lower is better)
Translates to: LRPRVGGGRAGCASLWRREKRAT*ACLGSY
Trigger: GTACGACCCCAAGCACGCCAATGTTGCCCTCTTCTC...CCTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCCCCTACCCGGGGCCGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CCGGGGTCGAGGCACCTGATCCTCCGGCACCGGCGTCCAGATGGACTCGGGGGAGAGAAGAGGGCAACATaGGCGTGCTTGGGGTCGTAC +
Preference number: 5 (lower is better)
Translates to: PGSRHLILRHRRPDGLGGEKRAT*ACLGSY
Trigger: GTACGACCCCAAGCACGCCAATGTTGCCCTCTTCTC...TCCCCCGAGTCCATCTGGACGCCGGTGCCGGAGGATCAGGTGCCTCGACCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CAA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTGCCAGGATGGCCTCCTaGTCCTTGCGCCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIARMAS*SLRRAS
Trigger: GCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGC...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGTGCAGCAGCGTGGCCTaGGCCCAGCCGTTCTGCATC +
Preference number: 5 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGCSSVA*AQPFCI
Trigger: GATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGCA...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGGGGAGGGCGAGCTGGTaGTGCTTCCTTGTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGGRASW*CFLVAE
Trigger: CTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCC...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTTGGGGAGAGGACTCGCTGGATGTaGAGGTCGTCAGCACCTTCT +
Preference number: 5 (lower is better)
Translates to: HGTHTHAHPHTPGAWVGERTRWM*RSSAPS
Trigger: AGAAGGTGCTGACGACCTCAACATCCAGCGAGTCCT...CTCCCCAACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CAGCCGCTGCCCTGTCTCGCCACCGCCGGGCCGTCCACACCTGTCCGGCCGGTAGGCTCTTTGAACCACTaGGAGTCATGTTTCACGGTG +
Preference number: 5 (lower is better)
Translates to: QPLPCLATAGPSTPVRPVGSLNH*ESCFTV
Trigger: CACCGTGAAACATGACTCCAAGTGGTTCAAAGAGCC...TACCGGCCGGACAGGTGTGGACGGCCCGGCGGTGGCGAGACAGGGCAGCGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CAA 90 bp CCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGCACGCGTGGCCCACTaGACACACACGCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: PSSCLLPETPALSPLPSAARVAH*THTPTA
Trigger: TGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGC...TGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp AGGGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGTGCAGCAGCGTGGCCTaGGCCCAGCCGTTCTGCATC +
Preference number: 5 (lower is better)
Translates to: RAEDPASHVACMVSWRSECSSVA*AQPFCI
Trigger: GATGCAGAACGGCTGGGCCAAGGCCACGCTGCTGCA...CTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp GGAGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTACACTCGCCCTCCTGTTaGCCCTTCATCCGACACACG +
Preference number: 5 (lower is better)
Translates to: GGHKGTGGMGLSHHPGAVHSPSC*PFIRHT
Trigger: CGTGTGTCGGATGAAGGGCAAACAGGAGGGCGAGTG...TACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CAGTTCTTCATACACCCCGAGTACTGCTGGCAGCGAGCCACAGGCACTCGGACCAAGACAACGGTCTGGTaGCCCCAGGGGCCGGCTCCC +
Preference number: 5 (lower is better)
Translates to: QFFIHPEYCWQRATGTRTKTTVW*PQGPAP
Trigger: GGGAGCCGGCCCCTGGGGCAACCAGACCGTTGTCTT...GGTCCGAGTGCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTGTATGAAGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS CCA 90 bp TCCCTGTCCCCAATGAACAGCGTCCTGTTGACCCGCAGGACTCGCTaGATGTTGAGGTCGTCAGCACCTTCTGCGGGGGTCAGGCGTCCG +
Preference number: 5 (lower is better)
Translates to: SLSPMNSVLLTRRTR*MLRSSAPSAGVRRP
Trigger: CGGACGCCTGACCCCCGCAGAAGGTGCTGACGACCTCAACATCCAGCGAGTCCTGCGGGTCAACAGGACGCTGTTCATTGGGGACAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586582.6
ENST00000586965.1
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CCCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAATGAACAGCGTCCTGTaGACCCGCAGGACTCGCTGG +
Preference number: 5 (lower is better)
Translates to: PSSCLLPETPALSPLPSAMNSVL*TRRTRW
Trigger: CCAGCGAGTCCTGCGGGTCAACAGGACGCTGTTCAT...TGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGGCTCTTTGAACCACTaGGAGTCATGTTTCACGGTG +
Preference number: 5 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHGSLNH*ESCFTV
Trigger: CACCGTGAAACATGACTCCAAGTGGTTCAAAGAGCC...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CGCCCAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACTGGGTCTTGACAAAGTaGAGGATGTCATCCGGCAAG +
Preference number: 5 (lower is better)
Translates to: RPGRWGHHDRRSWTHTLHWVLTK*RMSSGK
Trigger: CTTGCCGGATGACATCCTCAACTTTGTCAAGACCCA...GTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CCCTGCACGCGTGGCCCACTTGACACACACGCCCACAGCAGCCTTCGCTGGCACTCCTTCTGGGAAGTATaGGGCAAGCTCCGAGCCCAT +
Preference number: 5 (lower is better)
Translates to: PCTRGPLDTHAHSSLRWHSFWEV*GKLRAH
Trigger: ATGGGCTCGGAGCTTGCCCAATACTTCCCAGAAGGA...GTGCCAGCGAAGGCTGCTGTGGGCGTGTGTGTCAAGTGGGCCACGCGTGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586582.6
CDS-3UTR CAA 90 bp AAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTACAGAGGGGAGGGCGAGCTGGTaGTGCTTCCTTGTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: KGTGGMGLSHHPGAVFTEGRASW*CFLVAE
Trigger: CTCCGCCACAAGGAAGCACAACCAGCTCGCCCTCCC...CTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp GCCAGGATGGCCTCCTTGTCCTTGCGCCGGGCCAGCTCCCGCCGCTCACGGAGGACCCCGAGAACGGAGTaGTGCAATTGGTTAGAAAAC +
Preference number: 5 (lower is better)
Translates to: ARMASLSLRRASSRRSRRTPRTE*CNWLEN
Trigger: GTTTTCTAACCAATTGCACAACTCCGTTCTCGGGGT...CCTCCGTGAGCGGCGGGAGCTGGCCCGGCGCAAGGACAAGGAGGCCATCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS-3UTR CAA 90 bp GGCAGAGGACCCAGCCAGCCACGTGGCATGCATGGTCAGCTGGAGGTCAGAGGGAGGACTCGCTGGATGTaGAGGTCGTCAGCACCTTCT +
Preference number: 5 (lower is better)
Translates to: GRGPSQPRGMHGQLEVRGRTRWM*RSSAPS
Trigger: AGAAGGTGCTGACGACCTCAACATCCAGCGAGTCCT...CCCTCTGACCTCCAGCTGACCATGCATGCCACGTGGCTGGCTGGGTCCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGACCGGGTTGAAGGCGTaGGAACCGCACACAAAGAGC +
Preference number: 5 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQTGLKA*EPHTKS
Trigger: GCTCTTTGTGTGCGGTTCCAACGCCTTCAACCCGGT...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CAGGCCGCTGGGGCCACCACGATCGTCGCTCGTGGACACACACCCTGCACGCGTGGCTCTTTGAACCACTaGGAGTCATGTTTCACGGTG +
Preference number: 5 (lower is better)
Translates to: QAAGATTIVARGHTPCTRGSLNH*ESCFTV
Trigger: CACCGTGAAACATGACTCCAAGTGGTTCAAAGAGCC...ACGCGTGCAGGGTGTGTGTCCACGAGCGACGATCGTGGTGGCCCCAGCGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTTGGGGAGACCCCGAGAACGGAGTaGTGCAATTGGTTAGAAAAC +
Preference number: 5 (lower is better)
Translates to: HGTHTHAHPHTPGAWVGETPRTE*CNWLEN
Trigger: GTTTTCTAACCAATTGCACAACTCCGTTCTCGGGGT...CTCCCCAACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS TCA 90 bp CGACGGGCTGCAGGGTGTCTATGCTGTAGTTGGCGCACACCGGGTTaGAGGCGTTGGAACCGCACACAAAGAGCGTGGACTCGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: RRAAGCLCCSWRTPG*RRWNRTQRAWTRPE
Trigger: TTCGGGACGAGTCCACGCTCTTTGTGTGCGGTTCCAACGCCTTCAACCCGGTGTGCGCCAACTACAGCATAGACACCCTGCAGCCCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586582.6
ENST00000586965.1
ENST00000676793.1
ENST00000677828.1
CDS TCA 90 bp CAACATTGGCGTGCTTGGGGTCGTACGGGCAGCGGGCCATACCGCTaGTGTTGTCTCCGACGGGCTGCAGGGTGTCTATGCTGTAGTTGG +
Preference number: 5 (lower is better)
Translates to: QHWRAWGRTGSGPYR*CCLRRAAGCLCCSW
Trigger: CCAACTACAGCATAGACACCCTGCAGCCCGTCGGAGACAACATCAGCGGTATGGCCCGCTGCCCGTACGACCCCAAGCACGCCAATGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586582.6
ENST00000586965.1
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp AAGCCTCCCCTGCCTGCCGCCACCCCGAGAACGGAGTTGTGCAATTGGTTAGAATTGGCGCACACCGGGTaGAAGGCGTTGGAACCGCAC +
Preference number: 5 (lower is better)
Translates to: KPPLPAATPRTELCNWLELAHTG*KALEPH
Trigger: GTGCGGTTCCAACGCCTTCAACCCGGTGTGCGCCAA...TTCTAACCAATTGCACAACTCCGTTCTCGGGGTGGCGGCAGGCAGGGGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp AGGTCACAAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTGAGAAGAGGGCAACATaGGCGTGCTTGGGGTCGTAC +
Preference number: 5 (lower is better)
Translates to: RSQGDGWHGTLSPPWGRIEKRAT*ACLGSY
Trigger: GTACGACCCCAAGCACGCCAATGTTGCCCTCTTCTC...AATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTTGTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CACGCCCACCTCCCCGGCCCCTTGCACACGAACACGGCACGCACACGCACGCACAACGGAGTTGTGCAATaGGTTAGAAAACCGCAAAAG +
Preference number: 5 (lower is better)
Translates to: HAHLPGPLHTNTARTRTHNGVVQ*VRKPQK
Trigger: CTTTTGCGGTTTTCTAACCAATTGCACAACTCCGTT...GTGCGTGCGTGTGCGTGCCGTGTTCGTGTGCAAGGGGCCGGGGAGGTGGGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp AAGGGGACGGGTGGCATGGGACTCTCTCACCACCCTGGGGCCGTATTTACAGAGAGGACTCGCTGGATGTaGAGGTCGTCAGCACCTTCT +
Preference number: 5 (lower is better)
Translates to: KGTGGMGLSHHPGAVFTERTRWM*RSSAPS
Trigger: AGAAGGTGCTGACGACCTCAACATCCAGCGAGTCCT...CTCTGTAAATACGGCCCCAGGGTGGTGAGAGAGTCCCATGCCACCCGTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CCTCCTCGTGTCTCCTGCCTGAAACCCCGGCATTGTCCCCGCTTCCCTCTGCAGTGGGTCTTGACAAAGTaGAGGATGTCATCCGGCAAG +
Preference number: 5 (lower is better)
Translates to: PPRVSCLKPRHCPRFPLQWVLTK*RMSSGK
Trigger: CTTGCCGGATGACATCCTCAACTTTGTCAAGACCCA...CTGCAGAGGGAAGCGGGGACAATGCCGGGGTTTCAGGCAGGAGACACGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGAACGGAGTTGTGCAATaGGTTAGAAAACCGCAAAAG +
Preference number: 5 (lower is better)
Translates to: HTNTARTRTHTHTRQGPGNGVVQ*VRKPQK
Trigger: CTTTTGCGGTTTTCTAACCAATTGCACAACTCCGTT...CCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp ACACGAACACGGCACGCACACGCACGCACACCCACACACGCCAGGGGCCTGGGTAACGGAGTTGTGCAATaGGTTAGAAAACCGCAAAAG +
Preference number: 5 (lower is better)
Translates to: TRTRHAHARTPTHARGLGNGVVQ*VRKPQK
Trigger: CTTTTGCGGTTTTCTAACCAATTGCACAACTCCGTT...ACCCAGGCCCCTGGCGTGTGTGGGTGTGCGTGCGTGTGCGTGCCGTGTTCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586582.6
ENST00000676793.1
ENST00000677828.1
CDS-3UTR CAA 90 bp CAGTTCTTCATACACCCCGAGTACTGCTGGCAGCGAGCCACAGGCACTCGGACCTGGGTCTTGACAAAGTaGAGGATGTCATCCGGCAAG +
Preference number: 5 (lower is better)
Translates to: QFFIHPEYCWQRATGTRTWVLTK*RMSSGK
Trigger: CTTGCCGGATGACATCCTCAACTTTGTCAAGACCCA...GGTCCGAGTGCCTGTGGCTCGCTGCCAGCAGTACTCGGGGTGTATGAAGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677828.1
CDS GCA 72 bp CAGCACCTTCTGCGGGGGTCAGGCGTCCGGGCCCGCTaGCCACAAACACGGGATAGTGGTTCAGGTAGTCCC +
Preference number: 6 (lower is better)
Translates to: QHLLRGSGVRAR*PQTRDSGSGSP
Trigger: GGGACTACCTGAACCACTATCCCGTGTTTGTGGGCAGCGGGCCCGGACGCCTGACCCCCGCAGAAGGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586582.6
ENST00000586965.1
ENST00000676793.1
ENST00000677828.1
CDS CAA 90 bp TCCCCAATGAACAGCGTCCTGTTGACCCGCAGGACTCGCTGGATGTaGAGGTCGTCAGCACCTTCTGCGGGGGTCAGGCGTCCGGGCCCG +
Preference number: 6 (lower is better)
Translates to: SPMNSVLLTRRTRWM*RSSAPSAGVRRPGP
Trigger: CGGGCCCGGACGCCTGACCCCCGCAGAAGGTGCTGACGACCTCAACATCCAGCGAGTCCTGCGGGTCAACAGGACGCTGTTCATTGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586582.6
ENST00000586965.1
ENST00000676793.1
ENST00000677828.1
CDS TCA 72 bp CGTGCTTGGGGTCGTACGGGCAGCGGGCCATACCGCTaGTGTTGTCTCCGACGGGCTGCAGGGTGTCTATGC +
Preference number: 6 (lower is better)
Translates to: RAWGRTGSGPYR*CCLRRAAGCLC
Trigger: GCATAGACACCCTGCAGCCCGTCGGAGACAACATCAGCGGTATGGCCCGCTGCCCGTACGACCCCAAGCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586582.6
ENST00000586965.1
ENST00000676793.1
ENST00000677828.1
CDS CCA 72 bp AGGTCAGCTTCCTCTGGTACCGCAGCTCCGTGGACGTaGGGGGCTCCAGCTCTACGCGGTAGAGGTTGTCCC +
Preference number: 6 (lower is better)
Translates to: RSASSGTAAPWT*GAPALRGRGCP
Trigger: GGGACAACCTCTACCGCGTAGAGCTGGAGCCCCCCACGTCCACGGAGCTGCGGTACCAGAGGAAGCTGACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586582.6
ENST00000586965.1
ENST00000676793.1
ENST00000677828.1
CDS CCA 72 bp CCAACTCACCTGTGCAGTCCCCTAAGCCTGAGGTGCTaGCCCCGGACACGTCCTGCTCAAAGGCGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: PTHLCSPLSLRC*PRTRPAQRRLW
Trigger: CCAGAGCCGCCTTTGAGCAGGACGTGTCCGGGGCCAGCACCTCAGGCTTAGGGGACTGCACAGGTGAGTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589889.1
CDS TCA 72 bp CGCGCCCGGCCCACCCCATGCCTTTCTAAAGTTCTCTaGTGGAGTCCAGTTTCCCCACCCACCTCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: RARPTPCLSKVL*WSPVSPPTSQR
Trigger: CCTCTGGGAGGTGGGTGGGGAAACTGGACTCCATCAGAGAACTTTAGAAAGGCATGGGGTGGGCCGGGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589889.1
CDS GCA 72 bp AAGAGCATCCCGTCAGAGAAGAGGGCAACATTGGCGTaGTTGGGGTCGTACGGGCAGCGGGCCATACCGCTG +
Preference number: 6 (lower is better)
Translates to: KSIPSEKRATLA*LGSYGQRAIPL
Trigger: CAGCGGTATGGCCCGCTGCCCGTACGACCCCAAGCACGCCAATGTTGCCCTCTTCTCTGACGGGATGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586582.6
ENST00000586965.1
ENST00000676793.1
ENST00000677828.1
CDS CAA 72 bp AGCATCCCGTCAGAGAAGAGGGCAACATTGGCGTGCTaGGGGTCGTACGGGCAGCGGGCCATACCGCTGATG +
Preference number: 6 (lower is better)
Translates to: SIPSEKRATLAC*GSYGQRAIPLM
Trigger: CATCAGCGGTATGGCCCGCTGCCCGTACGACCCCAAGCACGCCAATGTTGCCCTCTTCTCTGACGGGATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586582.6
ENST00000586965.1
ENST00000676793.1
ENST00000677828.1
CDS CAA 90 bp GCTGTGAAGAGCATCCCGTCAGAGAAGAGGGCAACATTGGCGTGCTaGGGGTCGTACGGGCAGCGGGCCATACCGCTGATGTTGTCTCCG +
Preference number: 6 (lower is better)
Translates to: AVKSIPSEKRATLAC*GSYGQRAIPLMLSP
Trigger: CGGAGACAACATCAGCGGTATGGCCCGCTGCCCGTACGACCCCAAGCACGCCAATGTTGCCCTCTTCTCTGACGGGATGCTCTTCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586582.6
ENST00000586965.1
ENST00000676793.1
ENST00000677828.1
CDS CCA 72 bp CCAATGAACAGCGTCCTGTTGACCCGCAGGACTCGCTaGATGTTGAGGTCGTCAGCACCTTCTGCGGGGGTC +
Preference number: 6 (lower is better)
Translates to: PMNSVLLTRRTR*MLRSSAPSAGV
Trigger: GACCCCCGCAGAAGGTGCTGACGACCTCAACATCCAGCGAGTCCTGCGGGTCAACAGGACGCTGTTCATTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586582.6
ENST00000586965.1
ENST00000676793.1
ENST00000677828.1
CDS CAA 72 bp GCTGTGAAGAGCATCCCGTCAGAGAAGAGGGCAACATaGGCGTGCTTGGGGTCGTACGGGCAGCGGGCCATA +
Preference number: 6 (lower is better)
Translates to: AVKSIPSEKRAT*ACLGSYGQRAI
Trigger: TATGGCCCGCTGCCCGTACGACCCCAAGCACGCCAATGTTGCCCTCTTCTCTGACGGGATGCTCTTCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586582.6
ENST00000586965.1
ENST00000676793.1
ENST00000677828.1
CDS TCA 72 bp GCAGGGTGTCTATGCTGTAGTTGGCGCACACCGGGTTaGAGGCGTTGGAACCGCACACAAAGAGCGTGGACT +
Preference number: 6 (lower is better)
Translates to: AGCLCCSWRTPG*RRWNRTQRAWT
Trigger: AGTCCACGCTCTTTGTGTGCGGTTCCAACGCCTTCAACCCGGTGTGCGCCAACTACAGCATAGACACCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586582.6
ENST00000586965.1
ENST00000676793.1
ENST00000677828.1
CDS TCA 72 bp CAGAAAGGGGTACAGTCCAGGTCCCGGAGCCCCGAATaGGAAGTTCAGCAGCCTCGTCCTTCTGGGAAGTAT +
Preference number: 6 (lower is better)
Translates to: QKGVQSRSRSPE*EVQQPRPSGKY
Trigger: ATACTTCCCAGAAGGACGAGGCTGCTGAACTTCTCATTCGGGGCTCCGGGACCTGGACTGTACCCCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586582.6
CDS CCA 72 bp GAGCCCCGAATGAGAAGTTCAGCAGCCTCGTCCTTCTaGGAAGTATTGGGCAAGCTCCGAGCCCATTTTCCT +
Preference number: 6 (lower is better)
Translates to: EPRMRSSAASSF*EVLGKLRAHFP
Trigger: AGGAAAATGGGCTCGGAGCTTGCCCAATACTTCCCAGAAGGACGAGGCTGCTGAACTTCTCATTCGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586582.6