RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEMA6A (Homo sapiens)

Ensembl gene IDs: ENSG00000092421

Ensembl transcript IDs: ENST00000257414.12, ENST00000343348.11, ENST00000502996.5, ENST00000503402.1, ENST00000503865.1, ENST00000503962.1, ENST00000506114.1, ENST00000509665.1, ENST00000510024.5, ENST00000510263.5, ENST00000512156.1, ENST00000513137.5, ENST00000514316.1, ENST00000515009.5, ENST00000515129.5

Found 1018 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACGTGTGTGCTGTGCACATGGCTTGGAGACTCCTCCCAGGTGTCTaGCCAACCGCGCACCGCCTGCTCTCTAGCCAGTGGACGCAGCAG +
Preference number: 1 (lower is better)
Translates to: HVCAVHMAWRLLPGV*PTAHRLLSSQWTQQ
Trigger: CTGCTGCGTCCACTGGCTAGAGAGCAGGCGGTGCGCGGTTGGGCAGACACCTGGGAGGAGTCTCCAAGCCATGTGCACAGCACACACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTaGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCAC +
Preference number: 1 (lower is better)
Translates to: EDPASSALPQAFLVW*VLEAVENLAELSGH
Trigger: GTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
3UTR CCA 90 bp GAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTaGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGG +
Preference number: 1 (lower is better)
Translates to: EEDPASSALPQAFLV*WVLEAVENLAELSG
Trigger: CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
3UTR GCA 90 bp GAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTaGCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGA +
Preference number: 1 (lower is better)
Translates to: EYPCVPERRTQRPRL*RRPSWSGGYSRQLR
Trigger: TCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR TCA 90 bp TCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTaGGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCC +
Preference number: 1 (lower is better)
Translates to: SWSGGYSRQLRTLLS*AGTSPCLLVRHLTP
Trigger: GGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
3UTR GCA 90 bp TGGCTTGGAGACTCCTCCCAGGTGTCTGCCCAACCGCGCACCGCCTaGTCTCTAGCCAGTGGACGCAGCAGAAAAGAGGAATGGGACGTT +
Preference number: 1 (lower is better)
Translates to: WLGDSSQVSAQPRTA*SLASGRSRKEEWDV
Trigger: AACGTCCCATTCCTCTTTTCTGCTGCGTCCACTGGCTAGAGAGCAGGCGGTGCGCGGTTGGGCAGACACCTGGGAGGAGTCTCCAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 90 bp GTCATTTCTTTGTGTGCACTGCACGTGTGTGCTGTGCACATGGCTTaGAGACTCCTCCCAGGTGTCTGCCCAACCGCGCACCGCCTGCTC +
Preference number: 1 (lower is better)
Translates to: VISLCALHVCAVHMA*RLLPGVCPTAHRLL
Trigger: GAGCAGGCGGTGCGCGGTTGGGCAGACACCTGGGAGGAGTCTCCAAGCCATGTGCACAGCACACACGTGCAGTGCACACAAAGAAATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 90 bp GCCAAAGGGTGGTTCCAGTTGGCACAACTAGAAGGCAGTGTGAATTaGAGGGTGTGGTGCTGCCCAGCGTTCTCAGGCTGTCGCATGACA +
Preference number: 1 (lower is better)
Translates to: AKGWFQLAQLEGSVN*RVWCCPAFSGCRMT
Trigger: TGTCATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 90 bp CCCACAACAACACTGGGGTCCATGCTTCGCAGCACAGCCAAAGGGTaGTTCCAGTTGGCACAACTAGAAGGCAGTGTGAATTGGAGGGTG +
Preference number: 1 (lower is better)
Translates to: PTTTLGSMLRSTAKG*FQLAQLEGSVNWRV
Trigger: CACCCTCCAATTCACACTGCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGACCCCAGTGTTGTTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR TCA 90 bp AGGCTGTCGCATGACAACTATCACCACTGCATTCTTCCATCTGCTTaGCTCCAATCTTTCAGAGGGCTGGAAGTGGGGCAGAGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: RLSHDNYHHCILPSA*LQSFRGLEVGQRVG
Trigger: CCCCACCCTCTGCCCCACTTCCAGCCCTCTGAAAGATTGGAGTCAAGCAGATGGAAGAATGCAGTGGTGATAGTTGTCATGCGACAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR TCA 90 bp GCAGTGATGCCTACAAACACTGGACAAGACAGCCGCTTACGTCAATaGTGGGTGCTGCACTGCCAGTACTCTCGGGAGTCAAGCATGGGA +
Preference number: 1 (lower is better)
Translates to: AVMPTNTGQDSRLRQ*WVLHCQYSRESSMG
Trigger: TCCCATGCTTGACTCCCGAGAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAGTGTTTGTAGGCATCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR GCA 90 bp CAGTTGGCACAACTAGAAGGCAGTGTGAATTGGAGGGTGTGGTGCTaGCCAGCGTTCTCAGGCTGTCGCATGACAACTATCACCACTGCA +
Preference number: 1 (lower is better)
Translates to: QLAQLEGSVNWRVWC*PAFSGCRMTTITTA
Trigger: TGCAGTGGTGATAGTTGTCATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCTTCTAGTTGTGCCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR GCA 90 bp CTACAAACACTGGACAAGACAGCCGCTTACGTCAATGATGGGTGCTaGACTGCCAGTACTCTCGGGAGTCAAGCATGGGAAAGAAGGGGG +
Preference number: 1 (lower is better)
Translates to: LQTLDKTAAYVNDGC*TASTLGSQAWERRG
Trigger: CCCCCTTCTTTCCCATGCTTGACTCCCGAGAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAGTGTTTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 90 bp TGGTTCCAGTTGGCACAACTAGAAGGCAGTGTGAATTGGAGGGTGTaGTGCTGCCCAGCGTTCTCAGGCTGTCGCATGACAACTATCACC +
Preference number: 1 (lower is better)
Translates to: WFQLAQLEGSVNWRV*CCPAFSGCRMTTIT
Trigger: GGTGATAGTTGTCATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCTTCTAGTTGTGCCAACTGGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 90 bp GAGCTCTTGAGGATGAAAGGGGATTTGACACACCCACAACAACACTaGGGTCCATGCTTCGCAGCACAGCCAAAGGGTGGTTCCAGTTGG +
Preference number: 1 (lower is better)
Translates to: ELLRMKGDLTHPQQH*GPCFAAQPKGGSSW
Trigger: CCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGACCCCAGTGTTGTTGTGGGTGTGTCAAATCCCCTTTCATCCTCAAGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR GCA 90 bp TTCCAGTTGGCACAACTAGAAGGCAGTGTGAATTGGAGGGTGTGGTaGTGCCCAGCGTTCTCAGGCTGTCGCATGACAACTATCACCACT +
Preference number: 1 (lower is better)
Translates to: FQLAQLEGSVNWRVW*CPAFSGCRMTTITT
Trigger: AGTGGTGATAGTTGTCATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCTTCTAGTTGTGCCAACTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR GCA 90 bp TGCCTACAAACACTGGACAAGACAGCCGCTTACGTCAATGATGGGTaGTGCACTGCCAGTACTCTCGGGAGTCAAGCATGGGAAAGAAGG +
Preference number: 1 (lower is better)
Translates to: CLQTLDKTAAYVNDG*CTASTLGSQAWERR
Trigger: CCTTCTTTCCCATGCTTGACTCCCGAGAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAGTGTTTGTAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR GCA 90 bp CTGCATCTATTTCCATGTCATTTCTTTGTGTGCACTGCACGTGTGTaGTGTGCACATGGCTTGGAGACTCCTCCCAGGTGTCTGCCCAAC +
Preference number: 1 (lower is better)
Translates to: LHLFPCHFFVCTARV*CAHGLETPPRCLPN
Trigger: GTTGGGCAGACACCTGGGAGGAGTCTCCAAGCCATGTGCACAGCACACACGTGCAGTGCACACAAAGAAATGACATGGAAATAGATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 90 bp CCCAGTCAACGTTTTTGCAGCATCCATTGTGGTCGGCCTTGTACTTaGAGTTACTCGTTAATCACAGCAGGGACCAGCCTGCCTGCATCT +
Preference number: 1 (lower is better)
Translates to: PSQRFCSIHCGRPCT*SYSLITAGTSLPAS
Trigger: AGATGCAGGCAGGCTGGTCCCTGCTGTGATTAACGAGTAACTCCAAGTACAAGGCCGACCACAATGGATGCTGCAAAAACGTTGACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR TCA 90 bp TGTGTTTTGCAGGTTGGAACGCAAACCCAGTCTGGCCACGTCCCGTaGAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCG +
Preference number: 1 (lower is better)
Translates to: CVLQVGTQTQSGHVP*SCGQNVSVSVHLCA
Trigger: CGCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGCGTTCCAACCTGCAAAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR GCA 90 bp CCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTaGGTGTGTGTGTATGTGTTGTGTGCATGTGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: PVKLWTKCFSFCSPL*VCVYVLCACVCVCV
Trigger: CACACACACACACACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR GCA 90 bp CTGTCTCACATGCAAGGTGAAATGGGATGGCATATTGCAAGCTGGTaGCTTCACAGAAAGTCAGAACCATGGACAAAACCATGTTGGCAT +
Preference number: 1 (lower is better)
Translates to: LSHMQGEMGWHIASW*LHRKSEPWTKPCWH
Trigger: ATGCCAACATGGTTTTGTCCATGGTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGCCATCCCATTTCACCTTGCATGTGAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR GCA 90 bp TTGTACTTGGAGTTACTCGTTAATCACAGCAGGGACCAGCCTGCCTaGATCTATTTCCATGTCATTTCTTTGTGTGCACTGCACGTGTGT +
Preference number: 1 (lower is better)
Translates to: LYLELLVNHSRDQPA*IYFHVISLCALHVC
Trigger: ACACACGTGCAGTGCACACAAAGAAATGACATGGAAATAGATGCAGGCAGGCTGGTCCCTGCTGTGATTAACGAGTAACTCCAAGTACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 90 bp TTGCTGTCTCACATGCAAGGTGAAATGGGATGGCATATTGCAAGCTaGTGCCTTCACAGAAAGTCAGAACCATGGACAAAACCATGTTGG +
Preference number: 1 (lower is better)
Translates to: LLSHMQGEMGWHIAS*CLHRKSEPWTKPCW
Trigger: CCAACATGGTTTTGTCCATGGTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGCCATCCCATTTCACCTTGCATGTGAGACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR TCA 90 bp AGTTCACACCATTTGTGGATTTTGTTTGCTGTCTCACATGCAAGGTaGAATGGGATGGCATATTGCAAGCTGGTGCCTTCACAGAAAGTC +
Preference number: 1 (lower is better)
Translates to: SSHHLWILFAVSHAR*NGMAYCKLVPSQKV
Trigger: GACTTTCTGTGAAGGCACCAGCTTGCAATATGCCATCCCATTTCACCTTGCATGTGAGACAGCAAACAAAATCCACAAATGGTGTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 90 bp ACACCATTTGTGGATTTTGTTTGCTGTCTCACATGCAAGGTGAAATaGGATGGCATATTGCAAGCTGGTGCCTTCACAGAAAGTCAGAAC +
Preference number: 1 (lower is better)
Translates to: TPFVDFVCCLTCKVK*DGILQAGAFTESQN
Trigger: GTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGCCATCCCATTTCACCTTGCATGTGAGACAGCAAACAAAATCCACAAATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR TCA 90 bp AACGGTCACGTTATTTCATTAAAAGAGAGGAGGAGCAGAAATCTATaGCATAGTTGCCCAACATGGCATTTATCTGCTGCAACAGAAAGC +
Preference number: 1 (lower is better)
Translates to: NGHVISLKERRSRNL*HSCPTWHLSAATES
Trigger: GCTTTCTGTTGCAGCAGATAAATGCCATGTTGGGCAACTATGTCATAGATTTCTGCTCCTCCTCTCTTTTAATGAAATAACGTGACCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
3UTR GCA 90 bp AGATGTAACCCCACGAAGAACCCGTGTGATCAAATCATTAATTTATaGAAGGTAGCAGCCAGCATATTAGTTCACACCATTTGTGGATTT +
Preference number: 1 (lower is better)
Translates to: RCNPTKNPCDQIINL*KVAASILVHTICGF
Trigger: AAATCCACAAATGGTGTGAACTAATATGCTGGCTGCTACCTTGCATAAATTAATGATTTGATCACACGGGTTCTTCGTGGGGTTACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR TCA 90 bp GAAAGTCAGAACCATGGACAAAACCATGTTGGCATCAATGAGATATaGTGTGCCATTCTAAAAGCTTTCTCTCCTGATTGCTTTAGAAAT +
Preference number: 1 (lower is better)
Translates to: ESQNHGQNHVGINEI*CAILKAFSPDCFRN
Trigger: ATTTCTAAAGCAATCAGGAGAGAAAGCTTTTAGAATGGCACATCATATCTCATTGATGCCAACATGGTTTTGTCCATGGTTCTGACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR GCA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCGCGGGCACCTCGCCTTaGCTGCTGGTTCGACACCTG +
Preference number: 2 (lower is better)
Translates to: VPLCPREEDPASSALPQAAGTSP*LLVRHL
Trigger: CAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGC...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR-3UTR TCA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCAGAACCTTGCTGAGCTaGGCGGGCACCTCGCCTTGC +
Preference number: 2 (lower is better)
Translates to: VPLCPREEDPASSALPQARTLLS*AGTSPC
Trigger: GCAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCT...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR-3UTR TCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTAGAACCTTGCTGAGCTaGGCGGGCACCTCGCCTTGC +
Preference number: 2 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVRTLLS*AGTSPC
Trigger: GCAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCT...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
3UTR-3UTR GCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCGGGCACCTCGCCTTaGCTGCTGGTTCGACACCTG +
Preference number: 2 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLAGTSP*LLVRHL
Trigger: CAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGC...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
3UTR-3UTR GCA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCGCGGGCACCTCGCCTTaGCTGCTGGTTCGACACCTG +
Preference number: 2 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTAGTSP*LLVRHL
Trigger: CAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGC...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR-3UTR GCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGGCGGGCACCTCGCCTTaGCTGCTGGTTCGACACCTG +
Preference number: 2 (lower is better)
Translates to: QAFLVWWVLEAVENLAELAGTSP*LLVRHL
Trigger: CAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGC...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
3UTR-3UTR GCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCGCGGGCACCTCGCCTTaGCTGCTGGTTCGACACCTG +
Preference number: 2 (lower is better)
Translates to: EENEGESPPLQTFTKPRGAGTSP*LLVRHL
Trigger: CAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGC...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR-3UTR CCA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCTGCCGCAGGCCTTCTTaGTCTGGTGGGTACTCGAGG +
Preference number: 2 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTCRRPS*SGGYSR
Trigger: CCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR-3UTR CCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCTGCCGCAGGCCTTCTTaGTCTGGTGGGTACTCGAGG +
Preference number: 2 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFCRRPS*SGGYSR
Trigger: CCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR CAA 90 bp TGTCATTTCTTTGTGTGCACTGCACGTGTGTGCTGTGCACATGGCTaGGAGACTCCTCCCAGGTGTCTGCCCAACCGCGCACCGCCTGCT +
Preference number: 2 (lower is better)
Translates to: CHFFVCTARVCCAHG*ETPPRCLPNRAPPA
Trigger: AGCAGGCGGTGCGCGGTTGGGCAGACACCTGGGAGGAGTCTCCAAGCCATGTGCACAGCACACACGTGCAGTGCACACAAAGAAATGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR CCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCCAGGCCTTCTTGGTCTaGTGGGTACTCGAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFQAFLV*WVLEAV
Trigger: AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR CAA 90 bp AGCCAAAGGGTGGTTCCAGTTGGCACAACTAGAAGGCAGTGTGAATaGGAGGGTGTGGTGCTGCCCAGCGTTCTCAGGCTGTCGCATGAC +
Preference number: 2 (lower is better)
Translates to: SQRVVPVGTTRRQCE*EGVVLPSVLRLSHD
Trigger: GTCATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CAA 90 bp ACACTGGGGTCCATGCTTCGCAGCACAGCCAAAGGGTGGTTCCAGTaGGCACAACTAGAAGGCAGTGTGAATTGGAGGGTGTGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: TLGSMLRSTAKGWFQ*AQLEGSVNWRVWCC
Trigger: GCAGCACCACACCCTCCAATTCACACTGCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGACCCCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR TCA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCAGAACCTTGCTGAGCTaGGCGGGCACCTCGCCTTGC +
Preference number: 2 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFRTLLS*AGTSPC
Trigger: GCAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCT...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR CAA 90 bp CCCCAGTCAACGTTTTTGCAGCATCCATTGTGGTCGGCCTTGTACTaGGAGTTACTCGTTAATCACAGCAGGGACCAGCCTGCCTGCATC +
Preference number: 2 (lower is better)
Translates to: PQSTFLQHPLWSALY*ELLVNHSRDQPACI
Trigger: GATGCAGGCAGGCTGGTCCCTGCTGTGATTAACGAGTAACTCCAAGTACAAGGCCGACCACAATGGATGCTGCAAAAACGTTGACTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CAA 90 bp CCTTTGCCCCAGTCAACGTTTTTGCAGCATCCATTGTGGTCGGCCTaGTACTTGGAGTTACTCGTTAATCACAGCAGGGACCAGCCTGCC +
Preference number: 2 (lower is better)
Translates to: PLPQSTFLQHPLWSA*YLELLVNHSRDQPA
Trigger: GGCAGGCTGGTCCCTGCTGTGATTAACGAGTAACTCCAAGTACAAGGCCGACCACAATGGATGCTGCAAAAACGTTGACTGGGGCAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR TCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCGCGGCCCAGTTTTCGTaGGTACCCCTGTGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCAAQFS*VPLCPR
Trigger: TCTGGGACACAGGGGTACTCACGAAAACTGGGCCGC...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR-3UTR TCA 90 bp CACTGGACAAGACAGCCGCTTACGTCAATGATGGGTGCTGCACTGCCAGTACTCATTCTTCCATCTGCTTaGCTCCAATCTTTCAGAGGG +
Preference number: 2 (lower is better)
Translates to: HWTRQPLTSMMGAALPVLILPSA*LQSFRG
Trigger: CCCTCTGAAAGATTGGAGTCAAGCAGATGGAAGAAT...GAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR GCA 90 bp AGGCAGTGTGAATTGGAGGGTGTGGTGCTGCCCAGCGTTCTCAGGCTGTCGCATAATGTATTTGTGTTTTaGAGGTTGGAACGCAAACCC +
Preference number: 2 (lower is better)
Translates to: RQCELEGVVLPSVLRLSHNVFVF*RLERKP
Trigger: GGGTTTGCGTTCCAACCTGCAAAACACAAATACATT...ATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CAA 90 bp AAATGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTaGTGTGCATGTGTGTGTGTGTGTGTGTGTGGGGGTGGGGGATGG +
Preference number: 2 (lower is better)
Translates to: KCFSFCSPLCVCVYV*CACVCVCVCGGGGW
Trigger: CCATCCCCCACCCCCACACACACACACACACACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR-3UTR GCA 90 bp CTGGACAAGACAGCCGCTTACGTCAATGATGGGTGCTGCACTGCCAGTACTCTCCTGCATTCTTCCATCTaGTTGACTCCAATCTTTCAG +
Preference number: 2 (lower is better)
Translates to: LDKTAAYVNDGCCTASTLLHSSI*LTPIFQ
Trigger: CTGAAAGATTGGAGTCAAGCAGATGGAAGAATGCAG...GAGAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR TCA 90 bp AACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATAGAGTAAGAACCTTGCTGAGCTaGGCGGGCACCTCGCCTTGC +
Preference number: 2 (lower is better)
Translates to: NTAHGLQYVDSSFVHDRVRTLLS*AGTSPC
Trigger: GCAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCT...TACTCTATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR CCA 90 bp AACAACAACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATTGCCGCAGGCCTTCTTaGTCTGGTGGGTACTCGAGG +
Preference number: 2 (lower is better)
Translates to: NNNTAHGLQYVDSSFVHDCRRPS*SGGYSR
Trigger: CCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA...ATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTTGTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR GCA 90 bp CTGGACAAGACAGCCGCTTACGTCAATGATGGGTGCTGCACTGCCAGTACTCTCCAAATCATTAATTTATaGAAGGTAGCAGCCAGCATA +
Preference number: 2 (lower is better)
Translates to: LDKTAAYVNDGCCTASTLQIINL*KVAASI
Trigger: TATGCTGGCTGCTACCTTGCATAAATTAATGATTTG...GAGAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR TCA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGGTTTGTGATGATAACTaGAGTCTTTTGTGGGTCCGA +
Preference number: 2 (lower is better)
Translates to: KPSLATSREVVDKMFQFLVCDDN*SLLWVR
Trigger: TCGGACCCACAAAAGACTTCAGTTATCATCACAAAC...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR-3UTR GCA 90 bp GTACACAACTCAAGGTGTAAGGCACAAATTTACATGTGGAAAACAGGCTATTCAGTTTGCTGTCTCACATaGAAGGTGAAATGGGATGGC +
Preference number: 2 (lower is better)
Translates to: VHNSRCKAQIYMWKTGYSVCCLT*KVKWDG
Trigger: GCCATCCCATTTCACCTTGCATGTGAGACAGCAAAC...TGAATAGCCTGTTTTCCACATGTAAATTTGTGCCTTACACCTTGAGTTGTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR TCA 90 bp GAAGGCAACCACACTGATTATGGAGGCTCCACTTTTTCACTATCCAACTCAAAAGGCATCAATGAGATATaGTGTGCCATTCTAAAAGCT +
Preference number: 2 (lower is better)
Translates to: EGNHTDYGGSTFSLSNSKGINEI*CAILKA
Trigger: AGCTTTTAGAATGGCACATCATATCTCATTGATGCC...TTTTGAGTTGGATAGTGAAAAAGTGGAGCCTCCATAATCAGTGTGGTTGCCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR CAA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTAGCGGGCACCTCGCCTaGCCTGCTGGTTCGACACCT +
Preference number: 3 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSSGHLA*PAGSTP
Trigger: AGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCT...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
3UTR-3UTR CAA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGAGCGGGCACCTCGCCTaGCCTGCTGGTTCGACACCT +
Preference number: 3 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLSGHLA*PAGSTP
Trigger: AGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCT...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
3UTR GCA 72 bp TGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTaGCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGG +
Preference number: 3 (lower is better)
Translates to: CVPERRTQRPRL*RRPSWSGGYSR
Trigger: CCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
3UTR GCA 72 bp GCTGTGCACATGGCTTGGAGACTCCTCCCAGGTGTCTaGCCAACCGCGCACCGCCTGCTCTCTAGCCAGTGG +
Preference number: 3 (lower is better)
Translates to: AVHMAWRLLPGV*PTAHRLLSSQW
Trigger: CCACTGGCTAGAGAGCAGGCGGTGCGCGGTTGGGCAGACACCTGGGAGGAGTCTCCAAGCCATGTGCACAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR TCA 72 bp GGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTaGGCGGGCACCTCGCCTTGCCTGCTGGTTCGACAC +
Preference number: 3 (lower is better)
Translates to: GGYSRQLRTLLS*AGTSPCLLVRH
Trigger: GTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
3UTR GCA 72 bp GACTCCTCCCAGGTGTCTGCCCAACCGCGCACCGCCTaGTCTCTAGCCAGTGGACGCAGCAGAAAAGAGGAA +
Preference number: 3 (lower is better)
Translates to: DSSQVSAQPRTA*SLASGRSRKEE
Trigger: TTCCTCTTTTCTGCTGCGTCCACTGGCTAGAGAGCAGGCGGTGCGCGGTTGGGCAGACACCTGGGAGGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 72 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTaGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTG +
Preference number: 3 (lower is better)
Translates to: ASSALPQAFLVW*VLEAVENLAEL
Trigger: CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
3UTR CCA 72 bp CCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTaGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAG +
Preference number: 3 (lower is better)
Translates to: PASSALPQAFLV*WVLEAVENLAE
Trigger: CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
3UTR CCA 72 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTaGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTG +
Preference number: 3 (lower is better)
Translates to: RTQRPRLCRRPS*SGGYSRQLRTL
Trigger: CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
3UTR CCA 72 bp GGGTGCTGCACTGCCAGTACTCTCGGGAGTCAAGCATaGGAAAGAAGGGGGCAGGGGGATACAGACCCATCA +
Preference number: 3 (lower is better)
Translates to: GCCTASTLGSQA*ERRGQGDTDPS
Trigger: TGATGGGTCTGTATCCCCCTGCCCCCTTCTTTCCCATGCTTGACTCCCGAGAGTACTGGCAGTGCAGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR CAA 90 bp AGGCAGTGTGAATTGGAGGGTGTGGTGCTGCCCAGCGTTCTCAGGCTGTCGCATGGTGAGTCCCCGCCGTaGCAAACCTTCACCAAACCA +
Preference number: 3 (lower is better)
Translates to: RQCELEGVVLPSVLRLSHGESPP*QTFTKP
Trigger: TGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACC...ATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR CAA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGAGCGGGCACCTCGCCTaGCCTGCTGGTTCGACACCT +
Preference number: 3 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEESGHLA*PAGSTP
Trigger: AGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCT...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR GCA 72 bp GGGGATTTGACACACCCACAACAACACTGGGGTCCATaGTTCGCAGCACAGCCAAAGGGTGGTTCCAGTTGG +
Preference number: 3 (lower is better)
Translates to: GDLTHPQQHWGP*FAAQPKGGSSW
Trigger: CCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGACCCCAGTGTTGTTGTGGGTGTGTCAAATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR CAA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGAGCGGGCACCTCGCCTaGCCTGCTGGTTCGACACCT +
Preference number: 3 (lower is better)
Translates to: KPSLATSREVVDKMFQFLSGHLA*PAGSTP
Trigger: AGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCT...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR TCA 72 bp GGGTGTGGTGCTGCCCAGCGTTCTCAGGCTGTCGCATaGCAACTATCACCACTGCATTCTTCCATCTGCTTG +
Preference number: 3 (lower is better)
Translates to: GCGAAQRSQAVA*QLSPLHSSICL
Trigger: CAAGCAGATGGAAGAATGCAGTGGTGATAGTTGTCATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR GCA 72 bp GCACAACTAGAAGGCAGTGTGAATTGGAGGGTGTGGTaGTGCCCAGCGTTCTCAGGCTGTCGCATGACAACT +
Preference number: 3 (lower is better)
Translates to: AQLEGSVNWRVW*CPAFSGCRMTT
Trigger: AGTTGTCATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCTTCTAGTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR GCA 72 bp CTGGACAAGACAGCCGCTTACGTCAATGATGGGTGCTaGACTGCCAGTACTCTCGGGAGTCAAGCATGGGAA +
Preference number: 3 (lower is better)
Translates to: LDKTAAYVNDGC*TASTLGSQAWE
Trigger: TTCCCATGCTTGACTCCCGAGAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR GCA 72 bp ACACTGGACAAGACAGCCGCTTACGTCAATGATGGGTaGTGCACTGCCAGTACTCTCGGGAGTCAAGCATGG +
Preference number: 3 (lower is better)
Translates to: TLDKTAAYVNDG*CTASTLGSQAW
Trigger: CCATGCTTGACTCCCGAGAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 72 bp TTGGCACAACTAGAAGGCAGTGTGAATTGGAGGGTGTaGTGCTGCCCAGCGTTCTCAGGCTGTCGCATGACA +
Preference number: 3 (lower is better)
Translates to: LAQLEGSVNWRV*CCPAFSGCRMT
Trigger: TGTCATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCTTCTAGTTGTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR TCA 72 bp CCTACAAACACTGGACAAGACAGCCGCTTACGTCAATaGTGGGTGCTGCACTGCCAGTACTCTCGGGAGTCA +
Preference number: 3 (lower is better)
Translates to: PTNTGQDSRLRQ*WVLHCQYSRES
Trigger: TGACTCCCGAGAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAGTGTTTGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR GCA 72 bp CAACTAGAAGGCAGTGTGAATTGGAGGGTGTGGTGCTaGCCAGCGTTCTCAGGCTGTCGCATGACAACTATC +
Preference number: 3 (lower is better)
Translates to: QLEGSVNWRVWC*PAFSGCRMTTI
Trigger: GATAGTTGTCATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCTTCTAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 72 bp AGGATGAAAGGGGATTTGACACACCCACAACAACACTaGGGTCCATGCTTCGCAGCACAGCCAAAGGGTGGT +
Preference number: 3 (lower is better)
Translates to: RMKGDLTHPQQH*GPCFAAQPKGG
Trigger: ACCACCCTTTGGCTGTGCTGCGAAGCATGGACCCCAGTGTTGTTGTGGGTGTGTCAAATCCCCTTTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR CAA 90 bp CACTGGACAAGACAGCCGCTTACGTCAATGATGGGTGCTGCACTGCCAGTACTCCCATTGTGGTCGGCCTaGTACTTGGAGTTACTCGTT +
Preference number: 3 (lower is better)
Translates to: HWTRQPLTSMMGAALPVLPLWSA*YLELLV
Trigger: AACGAGTAACTCCAAGTACAAGGCCGACCACAATGG...GAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR CAA 90 bp GAAGGCAACCACACTGATTATGGAGGCTCCACTTTTTCACTATCCAACTCAAAACTGCCGCAGGCCTTCTaGGTCTGGTGGGTACTCGAG +
Preference number: 3 (lower is better)
Translates to: EGNHTDYGGSTFSLSNSKLPQAF*VWWVLE
Trigger: CTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAG...TTTTGAGTTGGATAGTGAAAAAGTGGAGCCTCCATAATCAGTGTGGTTGCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 72 bp CGTTTTTGCAGCATCCATTGTGGTCGGCCTTGTACTTaGAGTTACTCGTTAATCACAGCAGGGACCAGCCTG +
Preference number: 3 (lower is better)
Translates to: RFCSIHCGRPCT*SYSLITAGTSL
Trigger: CAGGCTGGTCCCTGCTGTGATTAACGAGTAACTCCAAGTACAAGGCCGACCACAATGGATGCTGCAAAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR CAA 90 bp TCCATGCTTCGCAGCACAGCCAAAGGGTGGTTCCAGTTGGCACAACTAGAAGGCGGTAGGTATGTGCTTTaGGCTCATGTTTGTGATGAT +
Preference number: 3 (lower is better)
Translates to: SMLRSTAKGWFQLAQLEGGRYVL*AHVCDD
Trigger: ATCATCACAAACATGAGCCAAAAGCACATACCTACC...GCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR TCA 72 bp CAGGTTGGAACGCAAACCCAGTCTGGCCACGTCCCGTaGAGTTGTGGACAAAATGTTTCAGTTTCTGTTCAC +
Preference number: 3 (lower is better)
Translates to: QVGTQTQSGHVP*SCGQNVSVSVH
Trigger: GTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGCGTTCCAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR TCA 72 bp CATGACAACTATCACCACTGCATTCTTCCATCTGCTTaGCTCCAATCTTTCAGAGGGCTGGAAGTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: HDNYHHCILPSA*LQSFRGLEVGQ
Trigger: CTGCCCCACTTCCAGCCCTCTGAAAGATTGGAGTCAAGCAGATGGAAGAATGCAGTGGTGATAGTTGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 72 bp AACGCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTaGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGC +
Preference number: 3 (lower is better)
Translates to: NANPVWPRPVKL*TKCFSFCSPLC
Trigger: GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR CCA 72 bp CCTTTGCCCCAGTCAACGTTTTTGCAGCATCCATTGTaGTCGGCCTTGTACTTGGAGTTACTCGTTAATCAC +
Preference number: 3 (lower is better)
Translates to: PLPQSTFLQHPL*SALYLELLVNH
Trigger: GTGATTAACGAGTAACTCCAAGTACAAGGCCGACCACAATGGATGCTGCAAAAACGTTGACTGGGGCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR GCA 72 bp GAGTTACTCGTTAATCACAGCAGGGACCAGCCTGCCTaGATCTATTTCCATGTCATTTCTTTGTGTGCACTG +
Preference number: 3 (lower is better)
Translates to: ELLVNHSRDQPA*IYFHVISLCAL
Trigger: CAGTGCACACAAAGAAATGACATGGAAATAGATGCAGGCAGGCTGGTCCCTGCTGTGATTAACGAGTAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CCA 72 bp TATTTGTGTTTTGCAGGTTGGAACGCAAACCCAGTCTaGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTC +
Preference number: 3 (lower is better)
Translates to: YLCFAGWNANPV*PRPVKLWTKCF
Trigger: GAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGCGTTCCAACCTGCAAAACACAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR-3UTR CAA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCGGTAGGTATGTGCTTTaGGCTCATGTTTGTGATGAT +
Preference number: 3 (lower is better)
Translates to: SLATSREVVDKMFQFLFTGRYVL*AHVCDD
Trigger: ATCATCACAAACATGAGCCAAAAGCACATACCTACC...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR CCA 72 bp CACATGCAAGGTGAAATGGGATGGCATATTGCAAGCTaGTGCCTTCACAGAAAGTCAGAACCATGGACAAAA +
Preference number: 3 (lower is better)
Translates to: HMQGEMGWHIAS*CLHRKSEPWTK
Trigger: TTTTGTCCATGGTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGCCATCCCATTTCACCTTGCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR CAA 90 bp GAAGGCAACCACACTGATTATGGAGGCTCCACTTTTTCACTATCCAACTCAAAACCACGTCCCGTGAAGTaGTGGACAAAATGTTTCAGT +
Preference number: 3 (lower is better)
Translates to: EGNHTDYGGSTFSLSNSKPRPVK*WTKCFS
Trigger: ACTGAAACATTTTGTCCACAACTTCACGGGACGTGG...TTTTGAGTTGGATAGTGAAAAAGTGGAGCCTCCATAATCAGTGTGGTTGCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR TCA 72 bp AGGTATGTGCTTTTGGCTCATGTTTGTGATGATAACTaGAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGT +
Preference number: 3 (lower is better)
Translates to: RYVLLAHVCDDN*SLLWVRPVVGC
Trigger: ACACCCTACAACAGGTCGGACCCACAAAAGACTTCAGTTATCATCACAAACATGAGCCAAAAGCACATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR GCA 72 bp TTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTaGGTGTGTGTGTATGTGTTGTGTGCATGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: LWTKCFSFCSPL*VCVYVLCACVC
Trigger: ACACACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR GCA 72 bp CCCACGAAGAACCCGTGTGATCAAATCATTAATTTATaGAAGGTAGCAGCCAGCATATTAGTTCACACCATT +
Preference number: 3 (lower is better)
Translates to: PTKNPCDQIINL*KVAASILVHTI
Trigger: AATGGTGTGAACTAATATGCTGGCTGCTACCTTGCATAAATTAATGATTTGATCACACGGGTTCTTCGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR-3UTR CAA 90 bp GTACACAACTCAAGGTGTAAGGCACAAATTTACATGTGGAAAACAGGCTATTCACACCATTTGTGGATTTaGTTTGCTGTCTCACATGCA +
Preference number: 3 (lower is better)
Translates to: VHNSRCKAQIYMWKTGYSHHLWI*FAVSHA
Trigger: TGCATGTGAGACAGCAAACAAAATCCACAAATGGTG...TGAATAGCCTGTTTTCCACATGTAAATTTGTGCCTTACACCTTGAGTTGTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR TCA 72 bp AACCATGGACAAAACCATGTTGGCATCAATGAGATATaGTGTGCCATTCTAAAAGCTTTCTCTCCTGATTGC +
Preference number: 3 (lower is better)
Translates to: NHGQNHVGINEI*CAILKAFSPDC
Trigger: GCAATCAGGAGAGAAAGCTTTTAGAATGGCACATCATATCTCATTGATGCCAACATGGTTTTGTCCATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCACCACGCTGGGGATGTaGCTGGGGGAGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VPLCPREEDPASSALPQATTLGM*LGEARR
Trigger: CCTGCGGGCCTCCCCCAGCCACATCCCCAGCGTGGT...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGACCACGCTGGGGATGTaGCTGGGGGAGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLTTLGM*LGEARR
Trigger: CCTGCGGGCCTCCCCCAGCCACATCCCCAGCGTGGT...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGGCAGGACCACCACGCTaGGGATGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLAGPPR*GCGWGR
Trigger: CCTCCCCCAGCCACATCCCCAGCGTGGTGGTCCTGC...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCTCTCCCACTCGCGGCTaGCGCGGCTGGGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLSPTRG*RGWASA
Trigger: AGCGGAAGCCCAGCCGCGGCAGCCGCGAGTGGGAGA...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGTCTCCCACTCGCGGCTaGCGCGGCTGGGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVSPTRG*RGWASA
Trigger: AGCGGAAGCCCAGCCGCGGCAGCCGCGAGTGGGAGA...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGATGGAGTCCACCCTCTaGGGGGCGGGCGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLMESTL*GAGGGL
Trigger: CAACCCGCCGCCCGCCCCGCAGAGGGTGGACTCCAT...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGCGGAGGAGCGCCGCTaGTGGGTTCCGAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVAEERR*WVPSAW
Trigger: CCAGGCGCTCGGAACCCAGCAGCGGCGCTCCTCCGC...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGCGCGGCTGCCGCGGCTaGGCTTCCGCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: REEDPASSALPQAFLVWWRGCRG*ASASAA
Trigger: TGCAGCAGAAGCGGAAGCCCAGCCGCGGCAGCCGCG...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGCGCGGCTGCCGCGGCTaGGCTTCCGCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLRGCRG*ASASAA
Trigger: TGCAGCAGAAGCGGAAGCCCAGCCGCGGCAGCCGCG...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGACCACGCTGGGGATGTaGCTGGGGGAGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: REEDPASSALPQAFLVWWTTLGM*LGEARR
Trigger: CCTGCGGGCCTCCCCCAGCCACATCCCCAGCGTGGT...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCCACGGCCTGGCCAGATaGCTGGGAGCTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: VPLCPREEDPASSALPQAHGLAR*LGAVHL
Trigger: CAGGTGCACAGCTCCCAGCCATCTGGCCAGGCCGTG...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCCACGGCCTGGCCAGATaGCTGGGAGCTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFHGLAR*LGAVHL
Trigger: CAGGTGCACAGCTCCCAGCCATCTGGCCAGGCCGTG...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCAGACGCAGTAGACGGTaGTGCCCGAGAAGACGGCCC +
Preference number: 4 (lower is better)
Translates to: VPLCPREEDPASSALPQARRSRR*CPRRRP
Trigger: GGGCCGTCTTCTCGGGCATCACCGTCTACTGCGTCT...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCCCCGGCGCGAGTGGGTaGGCTCCTTCTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLPGASG*APSPCA
Trigger: AGCGCAAGGAGAAGGAGCTCACCCACTCGCGCCGGG...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGCCCGGCGCGAGTGGGTaGGCTCCTTCTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVPGASG*APSPCA
Trigger: AGCGCAAGGAGAAGGAGCTCACCCACTCGCGCCGGG...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCACCCGGCGCGAGTGGGTaGGCTCCTTCTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAAPGASG*APSPCA
Trigger: AGCGCAAGGAGAAGGAGCTCACCCACTCGCGCCGGG...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCCAGCGTCCTCGGCTCTaGCGCAGGCCTTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFQRPRL*RRPSWS
Trigger: AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCCCGTGTTGCCGGGAGTaGCGAGCTTGCCGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFPCCRE*RACRCA
Trigger: TGCACAACGGCAAGCTCGCCACTCCCGGCAACACGG...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTACCACGCTGGGGATGTaGCTGGGGGAGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVTTLGM*LGEARR
Trigger: CCTGCGGGCCTCCCCCAGCCACATCCCCAGCGTGGT...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGACCACGCTGGGGATGTaGCTGGGGGAGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLTTLGM*LGEARR
Trigger: CCTGCGGGCCTCCCCCAGCCACATCCCCAGCGTGGT...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGCAGGACCACCACGCTaGGGATGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PERRTQRPRLCRRPSWSGAGPPR*GCGWGR
Trigger: CCTCCCCCAGCCACATCCCCAGCGTGGTGGTCCTGC...ACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCGAGACAGTCACGGCCTaGCCAGATGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VPLCPREEDPASSALPQAETVTA*PDGWEL
Trigger: CAGCTCCCAGCCATCTGGCCAGGCCGTGACTGTCTC...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCATGGAGTCCACCCTCTaGGGGGCGGGCGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLAMESTL*GAGGGL
Trigger: CAACCCGCCGCCCGCCCCGCAGAGGGTGGACTCCAT...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGGCGTTGAGGCTGGGCTaGCTCGAGACAGTCACGGCC +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQALRLG*LETVTA
Trigger: GGCCGTGACTGTCTCGAGGCAGCCCAGCCTCAACGC...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGTGGAGGGTGTGGTGCTaGCCAGCGTTCTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLWRVWC*PAFSGC
Trigger: ACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCA...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACGAGCCCCGGCGCGAGTaGGTGAGCTCCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYEPRRE*VSSFSL
Trigger: CAAGGAGAAGGAGCTCACCCACTCGCGCCGGGGCTC...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGGGGTTGACTCTGGGGTaGGGAGGGCCGTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQGLTLG*GGPSGP
Trigger: TGGACCTGACGGCCCTCCCCACCCCAGAGTCAACCC...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGGGTTGACTCTGGGGTaGGGAGGGCCGTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLGLTLG*GGPSGP
Trigger: TGGACCTGACGGCCCTCCCCACCCCAGAGTCAACCC...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTGGGTTGACTCTGGGGTaGGGAGGGCCGTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGGLTLG*GGPSGP
Trigger: TGGACCTGACGGCCCTCCCCACCCCAGAGTCAACCC...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCATCCAGTGTGGCGGCCTaGTCCTCCAGCGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAASSVAA*SSSAIW
Trigger: CCAGATGGCGCTGGAGGACCAGGCCGCCACACTGGA...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACCACGGCCTGGCCAGATaGCTGGGAGCTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYHGLAR*LGAVHL
Trigger: CAGGTGCACAGCTCCCAGCCATCTGGCCAGGCCGTG...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGCACGGCCTGGCCAGATaGCTGGGAGCTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQHGLAR*LGAVHL
Trigger: CAGGTGCACAGCTCCCAGCCATCTGGCCAGGCCGTG...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGAGACGCAGTAGACGGTaGTGCCCGAGAAGACGGCCC +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLRRSRR*CPRRRP
Trigger: GGGCCGTCTTCTCGGGCATCACCGTCTACTGCGTCT...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACCCTGGTGGCTTCTCGTaGGCGAGTTCGTGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYPGGFS*ASSWGS
Trigger: GCTACCCCACGAACTCGCTCACGAGAAGCCACCAGG...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTCCTGGTGGCTTCTCGTaGGCGAGTTCGTGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSPGGFS*ASSWGS
Trigger: GCTACCCCACGAACTCGCTCACGAGAAGCCACCAGG...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCCCCCGACCTTGTCAGTaGGTTGTAGGCGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VPLCPREEDPASSALPQAPRPCQ*VVGVEA
Trigger: AGCCTCAACGCCTACAACTCACTGACAAGGTCGGGG...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTTGCTGGTTCGACACCTaGCCCCCTCCCCCTGGGATT +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGCWFDT*PPPPGI
Trigger: AATCCCAGGGGGAGGGGGTCAGGTGTCGAACCAGCA...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTGCTGGTTCGACACCTaGCCCCCTCCCCCTGGGATT +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQCWFDT*PPPPGI
Trigger: AATCCCAGGGGGAGGGGGTCAGGTGTCGAACCAGCA...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCATGCTGGTTCGACACCTaGCCCCCTCCCCCTGGGATT +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAACWFDT*PPPPGI
Trigger: AATCCCAGGGGGAGGGGGTCAGGTGTCGAACCAGCA...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGAGAACCTTGCTGAGCTaGGCGGGCACCTCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: REEDPASSALPQAFLVWWRTLLS*AGTSPC
Trigger: GCAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCT...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCAGAACCTTGCTGAGCTaGGCGGGCACCTCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLRTLLS*AGTSPC
Trigger: GCAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCT...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGGCATCTTGGCCGTGTTaGCGGGAGTGGCGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQASWPC*REWRAC
Trigger: GCAAGCTCGCCACTCCCGGCAACACGGCCAAGATGC...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGGCGGGTTGTCTCCCCTaGCAAAGCTCTGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLAGCLP*QSSGFW
Trigger: CCAGAAACCAGAGCTTTGGCAGGGGAGACAACCCGC...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGGCGGGCACCTCGCCTTaGCTGCTGGTTCGACACCTG +
Preference number: 4 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLAGTSP*LLVRHL
Trigger: CAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGC...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGCAGCGTCCTCGGCTCTaGCGCAGGCCTTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: REEDPASSALPQAFLVWWQRPRL*RRPSWS
Trigger: AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGCGGCCGGCAGCGCGGTaGCGCGGGTGTGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPERRPAAR*RGCGDA
Trigger: AGCATCACCACACCCGCGGCACCGCGCTGCCGGCCG...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTCCGTGTTGCCGGGAGTaGCGAGCTTGCCGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSPCCRE*RACRCA
Trigger: TGCACAACGGCAAGCTCGCCACTCCCGGCAACACGG...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGCCGTGTTGCCGGGAGTaGCGAGCTTGCCGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQPCCRE*RACRCA
Trigger: TGCACAACGGCAAGCTCGCCACTCCCGGCAACACGG...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCCCGTGTTGCCGGGAGTaGCGAGCTTGCCGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLPCCRE*RACRCA
Trigger: TGCACAACGGCAAGCTCGCCACTCCCGGCAACACGG...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGCGCGGCTGCCGCGGCTaGGCTTCCGCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: WVLEAVENLAELSGHLALRGCRG*ASASAA
Trigger: TGCAGCAGAAGCGGAAGCCCAGCCGCGGCAGCCGCG...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTCTTATACTCCAGTGTaGCGGCCTGGTCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: VPLCPREEDPASSALPQASYTPV*RPGPPA
Trigger: CGCTGGAGGACCAGGCCGCCACACTGGAGTATAAGA...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGCCCGCTGTGGAACTTTaGGGGGCAGGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQPAVEL*GAGCPG
Trigger: ACCTGGACAGCCTGCCCCCCAAAGTTCCACAGCGGG...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGCCTGGCCAGATGGCTaGGAGCTGTGCACCTGGATG +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVAWPDG*ELCTWM
Trigger: CATCCAGGTGCACAGCTCCCAGCCATCTGGCCAGGC...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGCCTGGCCAGATGGCTaGGAGCTGTGCACCTGGATG +
Preference number: 4 (lower is better)
Translates to: PERRTQRPRLCRRPSWSGAWPDG*ELCTWM
Trigger: CATCCAGGTGCACAGCTCCCAGCCATCTGGCCAGGC...ACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGGAGACAGTCACGGCCTaGCCAGATGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQETVTA*PDGWEL
Trigger: CAGCTCCCAGCCATCTGGCCAGGCCGTGACTGTCTC...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGAGACAGTCACGGCCTaGCCAGATGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAAETVTA*PDGWEL
Trigger: CAGCTCCCAGCCATCTGGCCAGGCCGTGACTGTCTC...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGGCAGTGTGAATTGGAGGGTGTGGTGCTGCCCAGCGTTCTCAGGCTGTCGCATTGGGTTCCGAGCGCCTaGGCAGCCGAGTGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: RQCELEGVVLPSVLRLSHWVPSA*AAECAG
Trigger: CCCCGCGCACTCGGCTGCCCAGGCGCTCGGAACCCA...ATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CAA 72 bp GTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTaGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: VENLAELSGHLA*PAGSTPDPLPL
Trigger: CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGCAATGGCCAAGAGGGTaGCGGGAACCAGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: REEDPASSALPQAFLVWWQWPRG*REPAGR
Trigger: ACGACCAGCTGGTTCCCGTCACCCTCTTGGCCATTG...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCAATGGCCAAGAGGGTaGCGGGAACCAGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGQWPRG*REPAGR
Trigger: ACGACCAGCTGGTTCCCGTCACCCTCTTGGCCATTG...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTAGACGCAGTAGACGGTaGTGCCCGAGAAGACGGCCC +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVRRSRR*CPRRRP
Trigger: GGGCCGTCTTCTCGGGCATCACCGTCTACTGCGTCT...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGCCCGGCGCGAGTGGGTaGGCTCCTTCTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: WVLEAVENLAELSGHLALPGASG*APSPCA
Trigger: AGCGCAAGGAGAAGGAGCTCACCCACTCGCGCCGGG...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGCGGCCCAGTTTTCGTaGGTACCCCTGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLAAQFS*VPLCPR
Trigger: TCTGGGACACAGGGGTACTCACGAAAACTGGGCCGC...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGCGGCCCAGTTTTCGTaGGTACCCCTGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLAAQFS*VPLCPR
Trigger: TCTGGGACACAGGGGTACTCACGAAAACTGGGCCGC...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGCGGCCCAGTTTTCGTaGGTACCCCTGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVAAQFS*VPLCPR
Trigger: TCTGGGACACAGGGGTACTCACGAAAACTGGGCCGC...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGTCCTTCTCCTTGCGCTaGACCACAGCCACGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLSFSLR*TTATSL
Trigger: CAAAGACGTGGCTGTGGTGCAGCGCAAGGAGAAGGA...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGCTGGGCTTCCGCTTCTaGTGCAGCGTTGGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVLGFRF*CSVGVD
Trigger: GTCAACCCCAACGCTGCAGCAGAAGCGGAAGCCCAG...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCCTGGGCTTCCGCTTCTaGTGCAGCGTTGGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLLGFRF*CSVGVD
Trigger: GTCAACCCCAACGCTGCAGCAGAAGCGGAAGCCCAG...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCTCTCCCACTCGCGGCTaGCGCGGCTGGGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTSPTRG*RGWASA
Trigger: AGCGGAAGCCCAGCCGCGGCAGCCGCGAGTGGGAGA...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCTCTCCCACTCGCGGCTaGCGCGGCTGGGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFSPTRG*RGWASA
Trigger: AGCGGAAGCCCAGCCGCGGCAGCCGCGAGTGGGAGA...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAATGGAGTCCACCCTCTaGGGGGCGGGCGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPMESTL*GAGGGL
Trigger: CAACCCGCCGCCCGCCCCGCAGAGGGTGGACTCCAT...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCATGGAGTCCACCCTCTaGGGGGCGGGCGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTMESTL*GAGGGL
Trigger: CAACCCGCCGCCCGCCCCGCAGAGGGTGGACTCCAT...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACGATGGCTGGGAGCTGTaGACCTGGATGGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYDGWEL*TWMEST
Trigger: GGTGGACTCCATCCAGGTGCACAGCTCCCAGCCATC...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGGATGGCTGGGAGCTGTaGACCTGGATGGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQDGWEL*TWMEST
Trigger: GGTGGACTCCATCCAGGTGCACAGCTCCCAGCCATC...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGATGGCTGGGAGCTGTaGACCTGGATGGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLDGWEL*TWMEST
Trigger: GGTGGACTCCATCCAGGTGCACAGCTCCCAGCCATC...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGGGGCTGGGGCAGGGGTaGAAGGCTCTGGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELGLGQG*KALARL
Trigger: GAGCCGGGCCAGAGCCTTGCACCCCTGCCCCAGCCC...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTGTGGTGTTCCGTCCTaGCTTGTGGCCCACAAACAC +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFCGVPS*LVAHKH
Trigger: GTGTTTGTGGGCCACAAGCCAGGACGGAACACCACA...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCCCGTCGAATCTGATGTaGTTGTGCTGGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFPSNLM*LCWARG
Trigger: CCCTCTTGCCCAGCACAACCACATCAGATTCGACGG...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR CCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCATCACAGGGGAGCCCATaGGGGGCATGTCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAASQGSP*GACPLC
Trigger: GCACAAAGGACATGCCCCCCATGGGCTCCCCTGTGA...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCTCACAGGGGAGCCCATaGGGGGCATGTCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLSQGSP*GACPLC
Trigger: GCACAAAGGACATGCCCCCCATGGGCTCCCCTGTGA...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGTCACAGGGGAGCCCATaGGGGGCATGTCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSSQGSP*GACPLC
Trigger: GCACAAAGGACATGCCCCCCATGGGCTCCCCTGTGA...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTCCAGTGTGGCGGCCTaGTCCTCCAGCGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLASSVAA*SSSAIW
Trigger: CCAGATGGCGCTGGAGGACCAGGCCGCCACACTGGA...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTCCCGCTGTGGAACTTTaGGGGGCAGGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVPAVEL*GAGCPG
Trigger: ACCTGGACAGCCTGCCCCCCAAAGTTCCACAGCGGG...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTTGCCGCAGGCCTTCTTaGTCTGGTGGGTACTCGAGG +
Preference number: 4 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSCRRPS*SGGYSR
Trigger: CCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTGCCGCAGGCCTTCTTaGTCTGGTGGGTACTCGAGG +
Preference number: 4 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYCRRPS*SGGYSR
Trigger: CCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGCCCCGACCTTGTCAGTaGGTTGTAGGCGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSPRPCQ*VVGVEA
Trigger: AGCCTCAACGCCTACAACTCACTGACAAGGTCGGGG...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGCCCCGACCTTGTCAGTaGGTTGTAGGCGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: REEDPASSALPQAFLVWWPRPCQ*VVGVEA
Trigger: AGCCTCAACGCCTACAACTCACTGACAAGGTCGGGG...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGAAGATGGAGGGCACTaGCTCATCCATGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVEDGGH*LIHERV
Trigger: CACCCGCTCATGGATGAGGCAGTGCCCTCCATCTTC...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGCCACAGCCACGTCTTTaGGCCGATGATCACAGACGC +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVPQPRL*ADDHRR
Trigger: GCGTCTGTGATCATCGGCGCAAAGACGTGGCTGTGG...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCCCACAGCCACGTCTTTaGGCCGATGATCACAGACGC +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLPQPRL*ADDHRR
Trigger: GCGTCTGTGATCATCGGCGCAAAGACGTGGCTGTGG...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGCCACAGCCACGTCTTTaGGCCGATGATCACAGACGC +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLPQPRL*ADDHRR
Trigger: GCGTCTGTGATCATCGGCGCAAAGACGTGGCTGTGG...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGCGAGCTTGCCGTTGTaGATGAGTGGCGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLASLPL*MSGVRM
Trigger: CATCCTCACGCCACTCATGCACAACGGCAAGCTCGC...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGCGAGCTTGCCGTTGTaGATGAGTGGCGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: REEDPASSALPQAFLVWWASLPL*MSGVRM
Trigger: CATCCTCACGCCACTCATGCACAACGGCAAGCTCGC...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGGCTTCCGCTTCTGCTaGAGCGTTGGGGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLGFRFC*SVGVDS
Trigger: AGAGTCAACCCCAACGCTGCAGCAGAAGCGGAAGCC...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGCTGGGCTTCCGCTTCTaGTGCAGCGTTGGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLLGFRF*CSVGVD
Trigger: GTCAACCCCAACGCTGCAGCAGAAGCGGAAGCCCAG...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCGCATTTCCAGCCGCTTaGTTAGACCGGTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFAFPAA*LDRSET
Trigger: TGTCTCAGACCGGTCTAAGCAAGCGGCTGGAAATGC...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGGCGGGTTGTCTCCCCTaGCAAAGCTCTGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSAGCLP*QSSGFW
Trigger: CCAGAAACCAGAGCTTTGGCAGGGGAGACAACCCGC...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGGCGGGCACCTCGCCTTaGCTGCTGGTTCGACACCTG +
Preference number: 4 (lower is better)
Translates to: WVLEAVENLAELSGHLALAGTSP*LLVRHL
Trigger: CAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGC...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCACTCCTCCCAGGTGTCTaGCCAACCGCGCACCGCCTG +
Preference number: 4 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPLLPGV*PTAHRL
Trigger: CAGGCGGTGCGCGGTTGGGCAGACACCTGGGAGGAG...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGCCAGCACAGCAACCTaGCCTGGGCTTAGGAACTCG +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVASTAT*PGLRNS
Trigger: CGAGTTCCTAAGCCCAGGCCAGGTTGCTGTGCTGGC...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp CCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCGAGCCCCGGCGCGAGTaGGTGAGCTCCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PAVANLHQTTRPSFREYPEPRRE*VSSFSL
Trigger: CAAGGAGAAGGAGCTCACCCACTCGCGCCGGGGCTC...GGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGGATGGCCTCCGGCTTTaGGTCTTTGGATTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLDGLRL*VFGLSV
Trigger: GACACTCAATCCAAAGACCCAAAGCCGGAGGCCATC...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCGATGGCCTCCGGCTTTaGGTCTTTGGATTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: VPLCPREEDPASSALPQADGLRL*VFGLSV
Trigger: GACACTCAATCCAAAGACCCAAAGCCGGAGGCCATC...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCGCCGTTGTGCATGAGTaGCGTGAGGATGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLAAVVHE*REDGLR
Trigger: CCGGAGGCCATCCTCACGCCACTCATGCACAACGGC...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGGCAGGACCACCACGCTaGGGATGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPERAGPPR*GCGWGR
Trigger: CCTCCCCCAGCCACATCCCCAGCGTGGTGGTCCTGC...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCTCTTATACTCCAGTGTaGCGGCCTGGTCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLSYTPV*RPGPPA
Trigger: CGCTGGAGGACCAGGCCGCCACACTGGAGTATAAGA...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGTCTTATACTCCAGTGTaGCGGCCTGGTCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLSYTPV*RPGPPA
Trigger: CGCTGGAGGACCAGGCCGCCACACTGGAGTATAAGA...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCACAAGGTTCACCCCATaGTTGGGACTCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFTRFTP*LGLLLL
Trigger: CAGCAGCAAGAGTCCCAACCATGGGGTGAACCTTGT...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGAGTGGTGGCCTGGTaGCTTCTCGTGAGCGAGTTC +
Preference number: 4 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSRVVAW*LLVSEF
Trigger: GAACTCGCTCACGAGAAGCCACCAGGCCACCACTCT...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTAGAGTGGTGGCCTGGTaGCTTCTCGTGAGCGAGTTC +
Preference number: 4 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSRVVAW*LLVSEF
Trigger: GAACTCGCTCACGAGAAGCCACCAGGCCACCACTCT...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGTTGAGAGTGGTGGCCTaGTGGCTTCTCGTGAGCGAG +
Preference number: 4 (lower is better)
Translates to: REEDPASSALPQAFLVWWLRVVA*WLLVSE
Trigger: CTCGCTCACGAGAAGCCACCAGGCCACCACTCTCAA...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCTTGAGAGTGGTGGCCTaGTGGCTTCTCGTGAGCGAG +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLLRVVA*WLLVSE
Trigger: CTCGCTCACGAGAAGCCACCAGGCCACCACTCTCAA...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CACTGGACAAGACAGCCGCTTACGTCAATGATGGGTGCTGCACTGCCAGTACTCAGGGGTGCAAGGCTCTaGCCCGGCTCTGCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: HWTRQPLTSMMGAALPVLRGARL*PGSAAG
Trigger: GCCGGCCGCAGAGCCGGGCCAGAGCCTTGCACCCCT...GAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGCTGTGCACATGGCTTaGAGACTCCTCCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAAAVHMA*RLLPGV
Trigger: GACACCTGGGAGGAGTCTCCAAGCCATGTGCACAGC...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCATCTGGCCATTCCGCTaGATTCATCCCCGAATGGTT +
Preference number: 4 (lower is better)
Translates to: VPLCPREEDPASSALPQAIWPFR*IHPRMV
Trigger: AACCATTCGGGGATGAATTCAGCGGAATGGCCAGAT...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGAGTCTCCAGGAACTaGGCAGTTCAAGCGCGCCTT +
Preference number: 4 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSRVSRN*AVQARL
Trigger: AAGGCGCGCTTGAACTGCTCAGTTCCTGGAGACTCT...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCCCCTTCTTGTCTTGGTaGTTATGGGAAGACACTGCC +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFPFLSW*LWEDTA
Trigger: GGCAGTGTCTTCCCATAATCACCAAGACAAGAAGGG...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR TCA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGTGCTGGTTCGACACCTaGCCCCCTCCCCCTGGGATT +
Preference number: 4 (lower is better)
Translates to: WVLEAVENLAELSGHLALCWFDT*PPPPGI
Trigger: AATCCCAGGGGGAGGGGGTCAGGTGTCGAACCAGCA...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTCTGGCCACGTCCCGTaGAGTTGTGGACAAAATGTT +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFSGHVP*SCGQNV
Trigger: AACATTTTGTCCACAACTTCACGGGACGTGGCCAGA...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCAGGTGTAGAAAACGTTaGCAGGACAACATCACGCCC +
Preference number: 4 (lower is better)
Translates to: VPLCPREEDPASSALPQARCRKR*QDNITP
Trigger: GGGCGTGATGTTGTCCTGGCAACGTTTTCTACACCT...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCCCACGCTCTATGTCCTaGTCAAAAGTCAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFPRSMS*SKVSLL
Trigger: CAGCAGACTGACTTTTGAGCAGGACATAGAGCGTGG...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGCCCCCAAAGGGTCTGTaGTGTCAGGTGAGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: REEDPASSALPQAFLVWWPPKGL*CQVSQA
Trigger: TGCTTGACTCACCTGACAGCACAGACCCTTTGGGGG...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR GCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGTCCTTCTCCTTGCGCTaGACCACAGCCACGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVSFSLR*TTATSL
Trigger: CAAAGACGTGGCTGTGGTGCAGCGCAAGGAGAAGGA...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGCGGGTTGTCTCCCCTaGCAAAGCTCTGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVAGCLP*QSSGFW
Trigger: CCAGAAACCAGAGCTTTGGCAGGGGAGACAACCCGC...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGGCGGGCACCTCGCCTTaGCTGCTGGTTCGACACCTG +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPERAGTSP*LLVRHL
Trigger: CAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGC...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGGTGAGTCCCCGCCGTTaGAAACCTTCACCAAACCAC +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQVSPRR*KPSPNH
Trigger: GTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCAC...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTGTGAGTCCCCGCCGTTaGAAACCTTCACCAAACCAC +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGVSPRR*KPSPNH
Trigger: GTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCAC...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CACTGGACAAGACAGCCGCTTACGTCAATGATGGGTGCTGCACTGCCAGTACTCGGGAGCGGAGTTGGCTaGAGCCTCACCCCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: HWTRQPLTSMMGAALPVLGSGVG*SLTPCR
Trigger: GCGGCACGGGGTGAGGCTGCAGCCAACTCCGCTCCC...GAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCCAACACTGGGGTCCATaGTTCGCAGCACAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLQHWGP*FAAQPK
Trigger: CTTTGGCTGTGCTGCGAAGCATGGACCCCAGTGTTG...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGAGTGTGATTCTGATATaGCCCAGCAGCTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLSVILI*PSSCVH
Trigger: GTGGACACAGCTGCTGGGCCATATCAGAATCACACT...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGCTGATGTGGTTGTGCTaGGCAAGAGGGAACTGGAAT +
Preference number: 4 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLLMWLC*ARGNWN
Trigger: ATTCCAGTTCCCTCTTGCCCAGCACAACCACATCAG...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR CCA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGCCGTCGAATCTGATGTaGTTGTGCTGGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSPSNLM*LCWARG
Trigger: CCCTCTTGCCCAGCACAACCACATCAGATTCGACGG...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGCCGTCGAATCTGATGTaGTTGTGCTGGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLPSNLM*LCWARG
Trigger: CCCTCTTGCCCAGCACAACCACATCAGATTCGACGG...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR CCA 90 bp CCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCGCCGTTGTGCATGAGTaGCGTGAGGATGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PAVANLHQTTRPSFREYPAVVHE*REDGLR
Trigger: CCGGAGGCCATCCTCACGCCACTCATGCACAACGGC...GGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACGCCGTCAGGTCCAGGTaGTGCTGGTCTGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYAVRSR*CWSALM
Trigger: CATTAAAGCAGACCAGCACCACCTGGACCTGACGGC...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGCCGTCAGGTCCAGGTaGTGCTGGTCTGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLAVRSR*CWSALM
Trigger: CATTAAAGCAGACCAGCACCACCTGGACCTGACGGC...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGCATTGATGAGGTTCTaGTTCCTCTCCCACTCGCGG +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAAALMRF*FLSHSR
Trigger: CCGCGAGTGGGAGAGGAACCAGAACCTCATCAATGC...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGTCCAGTGTGGCGGCCTaGTCCTCCAGCGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLSSVAA*SSSAIW
Trigger: CCAGATGGCGCTGGAGGACCAGGCCGCCACACTGGA...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTTCTTATACTCCAGTGTaGCGGCCTGGTCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVSYTPV*RPGPPA
Trigger: CGCTGGAGGACCAGGCCGCCACACTGGAGTATAAGA...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGGCCTGGCCAGATGGCTaGGAGCTGTGCACCTGGATG +
Preference number: 4 (lower is better)
Translates to: WVLEAVENLAELSGHLALAWPDG*ELCTWM
Trigger: CATCCAGGTGCACAGCTCCCAGCCATCTGGCCAGGC...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGGCCTTCTTGGTCTGGTaGGTACTCGAGGCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQAFLVW*VLEAVE
Trigger: CTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGC...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTAACGCAAACCCAGTCTaGCCACGTCCCGTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGNANPV*PRPVKL
Trigger: CAACTTCACGGGACGTGGCCAGACTGGGTTTGCGTT...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCATCTCTCATACTTGCTaGGTGGGCCTCAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFISHTC*VGLRES
Trigger: TGATTCCCTGAGGCCCACCCAGCAAGTATGAGAGAT...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
3UTR CAA 72 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTaGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTT +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAF*VWWVLEAVENL
Trigger: AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGTTGAGCCGTCGAATCTaGTGTGGTTGTGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLLSRRI*CGCAGQ
Trigger: TTGCCCAGCACAACCACATCAGATTCGACGGCTCAA...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR TCA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGTCTGTGCTGTCAGGTaGGTCAAGCAGATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSVCAVR*VKQMLP
Trigger: TGGAAGCATCTGCTTGACTCACCTGACAGCACAGAC...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR TCA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAAGACGCAGTAGACGGTaGTGCCCGAGAAGACGGCCC +
Preference number: 4 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPRRSRR*CPRRRP
Trigger: GGGCCGTCTTCTCGGGCATCACCGTCTACTGCGTCT...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGAGACGCAGTAGACGGTaGTGCCCGAGAAGACGGCCC +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLRRSRR*CPRRRP
Trigger: GGGCCGTCTTCTCGGGCATCACCGTCTACTGCGTCT...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTTTGGGTCTTTGGATTaGGTGTCCCCAAAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYFGSLD*VSPKRP
Trigger: CGGCCTCTTTGGGGACACTCAATCCAAAGACCCAAA...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGTTTGGGTCTTTGGATTaGGTGTCCCCAAAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLFGSLD*VSPKRP
Trigger: CGGCCTCTTTGGGGACACTCAATCCAAAGACCCAAA...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCCCTGGTGGCTTCTCGTaGGCGAGTTCGTGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFPGGFS*ASSWGS
Trigger: GCTACCCCACGAACTCGCTCACGAGAAGCCACCAGG...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGTGCTGGTTCGACACCTaGCCCCCTCCCCCTGGGATT +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLCWFDT*PPPPGI
Trigger: AATCCCAGGGGGAGGGGGTCAGGTGTCGAACCAGCA...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCAGAACCTTGCTGAGCTaGGCGGGCACCTCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTRTLLS*AGTSPC
Trigger: GCAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCT...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCAACCATTTTGAATCGTaGTTGACGGTCCGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFNHFES*LTVRRV
Trigger: TACCCTGCGGACCGTCAAGCACGATTCAAAATGGTT...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTCATAGGCACAGACTaGAGACCCAGGGATGCTGTT +
Preference number: 4 (lower is better)
Translates to: REEDPASSALPQAFLVWWVIGTD*RPRDAV
Trigger: AACAGCATCCCTGGGTCTGCAGTCTGTGCCTATGAC...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTGGGTGATAAATGGCTaGAGGCACCACCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFWVING*RHHLPL
Trigger: TAAAGGAAGGTGGTGCCTGCAGCCATTTATCACCCA...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGGAAAGCCAGGATGACTaGAATGGCCAAGAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSESQDD*NGQEGD
Trigger: GTCACCCTCTTGGCCATTGCAGTCATCCTGGCTTTC...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGAAAGCCAGGATGACTaGAATGGCCAAGAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVESQDD*NGQEGD
Trigger: GTCACCCTCTTGGCCATTGCAGTCATCCTGGCTTTC...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGGCATCTTGGCCGTGTTaGCGGGAGTGGCGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLASWPC*REWRAC
Trigger: GCAAGCTCGCCACTCCCGGCAACACGGCCAAGATGC...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGCATCTTGGCCGTGTTaGCGGGAGTGGCGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPASWPC*REWRAC
Trigger: GCAAGCTCGCCACTCCCGGCAACACGGCCAAGATGC...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTCAGGTCCAGGTGGTaGTGGTCTGCTTTAATGAGC +
Preference number: 4 (lower is better)
Translates to: REEDPASSALPQAFLVWWVRSRW*WSALMS
Trigger: GCTCATTAAAGCAGACCAGCACCACCTGGACCTGAC...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGCATTTCCAGCCGCTTaGTTAGACCGGTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVAFPAA*LDRSET
Trigger: TGTCTCAGACCGGTCTAAGCAAGCGGCTGGAAATGC...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCGCGTTGAGGCTGGGCTaGCTCGAGACAGTCACGGCC +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGALRLG*LETVTA
Trigger: GGCCGTGACTGTCTCGAGGCAGCCCAGCCTCAACGC...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCAGCGTCCTCGGCTCTaGCGCAGGCCTTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEQRPRL*RRPSWS
Trigger: AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCAACCGCGCACCGCCTaGTCTCTAGCCAGTGGACGC +
Preference number: 4 (lower is better)
Translates to: FLVWWVLEAVENLAELSGQPRTA*SLASGR
Trigger: GCGTCCACTGGCTAGAGAGCAGGCGGTGCGCGGTTG...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGCGGCGACTACTTTCTaGGATGCAAACGCGATGTGT +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAAAATTF*DANAMC
Trigger: ACACATCGCGTTTGCATCCCAGAAAGTAGTCGCCGC...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCCTGTTGGGTGATAAATaGCTGCAGGCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLLLGDK*LQAPPS
Trigger: GGAAGGTGGTGCCTGCAGCCATTTATCACCCAACAG...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCGAGCCCCGGCGCGAGTaGGTGAGCTCCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGEPRRE*VSSFSL
Trigger: CAAGGAGAAGGAGCTCACCCACTCGCGCCGGGGCTC...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGGAGCCCCGGCGCGAGTaGGTGAGCTCCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELEPRRE*VSSFSL
Trigger: CAAGGAGAAGGAGCTCACCCACTCGCGCCGGGGCTC...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTCCGTGTTGCCGGGAGTaGCGAGCTTGCCGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLPCCRE*RACRCA
Trigger: TGCACAACGGCAAGCTCGCCACTCCCGGCAACACGG...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGCCGTCAGGTCCAGGTaGTGCTGGTCTGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVAVRSR*CWSALM
Trigger: CATTAAAGCAGACCAGCACCACCTGGACCTGACGGC...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGTCGCTCATTTTGGGCTaGTCCACGTACTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: REEDPASSALPQAFLVWWSLILG*STYSCW
Trigger: CCAGCATGAGTACGTGGACCAGCCCAAAATGAGCGA...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGCCACCTCGCTCATTTTaGGCTGGTCCACGTACTCAT +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQPPRSF*AGPRTH
Trigger: ATGAGTACGTGGACCAGCCCAAAATGAGCGAGGTGG...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTCCTCCAGCGCCATCTaGGCCACCTCGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLASSSAI*ATSLIL
Trigger: CAAAATGAGCGAGGTGGCCCAGATGGCGCTGGAGGA...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGTCCAGTGTGGCGGCCTaGTCCTCCAGCGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELSSVAA*SSSAIW
Trigger: CCAGATGGCGCTGGAGGACCAGGCCGCCACACTGGA...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCCTGGCCAGATGGCTaGGAGCTGTGCACCTGGATG +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLAWPDG*ELCTWM
Trigger: CATCCAGGTGCACAGCTCCCAGCCATCTGGCCAGGC...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGAGACAGTCACGGCCTaGCCAGATGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFETVTA*PDGWEL
Trigger: CAGCTCCCAGCCATCTGGCCAGGCCGTGACTGTCTC...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGCCTTCTTGGTCTGGTaGGTACTCGAGGCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVAFLVW*VLEAVE
Trigger: CTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGC...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTATCTGGCCATTCCGCTaGATTCATCCCCGAATGGTT +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGIWPFR*IHPRMV
Trigger: AACCATTCGGGGATGAATTCAGCGGAATGGCCAGAT...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCAAGACTCCGGTAAATaGCTGCGTCAATGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGQDSGK*LRQWQG
Trigger: TCCTTGCCATTGACGCAGTCATTTACCGGAGTCTTG...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCACAATGGCCAAGAGGGTaGCGGGAACCAGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPQWPRG*REPAGR
Trigger: ACGACCAGCTGGTTCCCGTCACCCTCTTGGCCATTG...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCTGGTGGCTTCTCGTaGGCGAGTTCGTGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGPGGFS*ASSWGS
Trigger: GCTACCCCACGAACTCGCTCACGAGAAGCCACCAGG...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTTGTAGGCGTTaGGGCTGGGCTGCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFVSCRR*GWAASR
Trigger: TCTCGAGGCAGCCCAGCCTCAACGCCTACAACTCAC...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGGTGAGTTGTAGGCGTTaGGGCTGGGCTGCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLVSCRR*GWAASR
Trigger: TCTCGAGGCAGCCCAGCCTCAACGCCTACAACTCAC...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGGTGAGTTGTAGGCGTTaGGGCTGGGCTGCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPERVSCRR*GWAASR
Trigger: TCTCGAGGCAGCCCAGCCTCAACGCCTACAACTCAC...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGCCCCGACCTTGTCAGTaGGTTGTAGGCGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: WVLEAVENLAELSGHLALPRPCQ*VVGVEA
Trigger: AGCCTCAACGCCTACAACTCACTGACAAGGTCGGGG...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCTCTGGCCACGTCCCGTaGAGTTGTGGACAAAATGTT +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLSGHVP*SCGQNV
Trigger: AACATTTTGTCCACAACTTCACGGGACGTGGCCAGA...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGAGCCGCTTACGTCAATaGTGGGTGCTGCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: WVLEAVENLAELSGHLALSRLRQ*WVLHCQ
Trigger: CTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCT...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTTCACAGCCGAGACCTTaGAGCTTTCTCATGGGGGTT +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVSQPRP*SFLMGV
Trigger: AACCCCCATGAGAAAGCTTCAAGGTCTCGGCTGTGA...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503865.1
CDS-3UTR TCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTTCCAAGCTGGCACAATaGTACCTGTTCTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGSKLAQ*YLFSLA
Trigger: TGCCAGAGAGAACAGGTATCATTGTGCCAGCTTGGA...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR GCA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTTCATCCATGAGCGGGTaGGTCTTGATGAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSSSMSG*VLMKFR
Trigger: CCTGAACTTCATCAAGACGCACCCGCTCATGGATGA...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCCTTGCTCTGTCCAGCTaGATGCCCATGATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLLALSS*MPMILL
Trigger: CAAAAGGATCATGGGCATGCAGCTGGACAGAGCAAG...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGCTTGCTCTGTCCAGCTaGATGCCCATGATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQLALSS*MPMILL
Trigger: CAAAAGGATCATGGGCATGCAGCTGGACAGAGCAAG...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTCAACATACAGAGAGCTaGTTGCTCTGTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSQHTES*LLCPAA
Trigger: TGCAGCTGGACAGAGCAAGCAGCTCTCTGTATGTTG...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGCCACGCTCTATGTCCTaGTCAAAAGTCAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: REEDPASSALPQAFLVWWPRSMS*SKVSLL
Trigger: CAGCAGACTGACTTTTGAGCAGGACATAGAGCGTGG...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp CCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTCAGGTGGTGCTGGTCTaGTTTAATGAGCATCTTGGC +
Preference number: 4 (lower is better)
Translates to: PERRTQRPRLCRRPSWSGQVVLV*FNEHLG
Trigger: GCCAAGATGCTCATTAAAGCAGACCAGCACCACCTG...ACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCCAGGTGGTGCTGGTCTaGTTTAATGAGCATCTTGGC +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLQVVLV*FNEHLG
Trigger: GCCAAGATGCTCATTAAAGCAGACCAGCACCACCTG...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGCAGGTGGTGCTGGTCTaGTTTAATGAGCATCTTGGC +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQQVVLV*FNEHLG
Trigger: GCCAAGATGCTCATTAAAGCAGACCAGCACCACCTG...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGGGCTTCCGCTTCTaGTGCAGCGTTGGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLLGFRF*CSVGVD
Trigger: GTCAACCCCAACGCTGCAGCAGAAGCGGAAGCCCAG...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGGCATTTCCAGCCGCTTaGTTAGACCGGTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLAFPAA*LDRSET
Trigger: TGTCTCAGACCGGTCTAAGCAAGCGGCTGGAAATGC...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGGATGGCTGGGAGCTGTaGACCTGGATGGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPERDGWEL*TWMEST
Trigger: GGTGGACTCCATCCAGGTGCACAGCTCCCAGCCATC...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGGATGGCTGGGAGCTGTaGACCTGGATGGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLDGWEL*TWMEST
Trigger: GGTGGACTCCATCCAGGTGCACAGCTCCCAGCCATC...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGGATGGGGTAGGTATGTaGTTTTGGCTCATGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLDGVGM*FWLMFV
Trigger: CACAAACATGAGCCAAAAGCACATACCTACCCCATC...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTTACGTCAATGATGGGTaGTGCACTGCCAGTACTCTC +
Preference number: 4 (lower is better)
Translates to: PERRTQRPRLCRRPSWSGYVNDG*CTASTL
Trigger: GAGAGTACTGGCAGTGCAGCACCCATCATTGACGTA...ACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCATGATCATAATCATCTaGATGTCCAGCCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PLCPREEDPASSALPQAFMIIII*MSSLCL
Trigger: GAGGCACAGGCTGGACATCCAGATGATTATGATCAT...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTCGTTCATCAGGAACTaGTGTCCAGGTGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQSFIRN*CPGGIR
Trigger: CCTGATTCCACCTGGACACCAGTTCCTGATGAACGA...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTCTGATGTGGTTGTGCTaGGCAAGAGGGAACTGGAAT +
Preference number: 4 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSLMWLC*ARGNWN
Trigger: ATTCCAGTTCCCTCTTGCCCAGCACAACCACATCAG...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR CCA 90 bp CCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTCCGGCTTTGGGTCTTTaGATTGAGTGTCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PERRTQRPRLCRRPSWSGPALGL*IECPQR
Trigger: TCTTTGGGGACACTCAATCCAAAGACCCAAAGCCGG...ACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGATGGCCTCCGGCTTTaGGTCTTTGGATTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVDGLRL*VFGLSV
Trigger: GACACTCAATCCAAAGACCCAAAGCCGGAGGCCATC...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCAGGTCCAGGTGGTGCTaGTCTGCTTTAATGAGCATC +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLRSRWC*SALMSI
Trigger: GATGCTCATTAAAGCAGACCAGCACCACCTGGACCT...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTAGGTCCAGGTGGTGCTaGTCTGCTTTAATGAGCATC +
Preference number: 4 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSRSRWC*SALMSI
Trigger: GATGCTCATTAAAGCAGACCAGCACCACCTGGACCT...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGAGGTCCAGGTGGTGCTaGTCTGCTTTAATGAGCATC +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLRSRWC*SALMSI
Trigger: GATGCTCATTAAAGCAGACCAGCACCACCTGGACCT...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGCGCGGCTGCCGCGGCTaGGCTTCCGCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEERGCRG*ASASAA
Trigger: TGCAGCAGAAGCGGAAGCCCAGCCGCGGCAGCCGCG...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGTCACAGGGGAGCCCATaGGGGGCATGTCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLSQGSP*GACPLC
Trigger: GCACAAAGGACATGCCCCCCATGGGCTCCCCTGTGA...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTTCACAGGGGAGCCCATaGGGGGCATGTCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLSQGSP*GACPLC
Trigger: GCACAAAGGACATGCCCCCCATGGGCTCCCCTGTGA...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGGAGCAAAGGATGGTTTaGGGGGTACGTCCGGCTTTA +
Preference number: 4 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLEQRMV*GVRPAL
Trigger: TAAAGCCGGACGTACCCCCCAAACCATCCTTTGCTC...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCCAGGCCTTCTTGGTCTaGTGGGTACTCGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLAQAFLV*WVLEAV
Trigger: AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGTGCCGCAGGCCTTCTTaGTCTGGTGGGTACTCGAGG +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLCRRPS*SGGYSR
Trigger: CCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTACCTGTTGTAGGGTGTaGGGGAAAGTGAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PERRTQRPRLCRRPSWSGTCCRV*GKVKEE
Trigger: CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGT...ACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCGCAGAGGCCTGGAGGTaGGACACCCAAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGAEAWR*DTQAGC
Trigger: ACAGCCAGCTTGGGTGTCCCACCTCCAGGCCTCTGC...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR TCA 90 bp AGGCAGTGTGAATTGGAGGGTGTGGTGCTGCCCAGCGTTCTCAGGCTGTCGCATGGAACCATGGCCTGTTaGAGATGGAGGGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: RQCELEGVVLPSVLRLSHGTMAC*RWRALP
Trigger: AGGCAGTGCCCTCCATCTTCAACAGGCCATGGTTCC...ATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGCAATGGCCAAGAGGGTaGCGGGAACCAGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELQWPRG*REPAGR
Trigger: ACGACCAGCTGGTTCCCGTCACCCTCTTGGCCATTG...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCAATGGCCAAGAGGGTaGCGGGAACCAGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGQWPRG*REPAGR
Trigger: ACGACCAGCTGGTTCCCGTCACCCTCTTGGCCATTG...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCGTGAGTTGTAGGCGTTaGGGCTGGGCTGCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGVSCRR*GWAASR
Trigger: TCTCGAGGCAGCCCAGCCTCAACGCCTACAACTCAC...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGCCCCGACCTTGTCAGTaGGTTGTAGGCGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLPRPCQ*VVGVEA
Trigger: AGCCTCAACGCCTACAACTCACTGACAAGGTCGGGG...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGGTTTGTGATGATAACTaGAGTCTTTTGTGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLVCDDN*SLLWVR
Trigger: TCGGACCCACAAAAGACTTCAGTTATCATCACAAAC...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTTCTGGCCACGTCCCGTaGAGTTGTGGACAAAATGTT +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVSGHVP*SCGQNV
Trigger: AACATTTTGTCCACAACTTCACGGGACGTGGCCAGA...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCTTCACCCTTTTCGGTaGATCGACGGACAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGLHPFR*IDGQAA
Trigger: GGCCGCCTGTCCGTCGATGCACCGAAAAGGGTGAAG...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCGAAAGCCAGGATGACTaGAATGGCCAAGAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLAESQDD*NGQEGD
Trigger: GTCACCCTCTTGGCCATTGCAGTCATCCTGGCTTTC...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCCACAGCCACGTCTTTaGGCCGATGATCACAGACGC +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLPQPRL*ADDHRR
Trigger: GCGTCTGTGATCATCGGCGCAAAGACGTGGCTGTGG...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGGCGAGCTTGCCGTTGTaGATGAGTGGCGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLASLPL*MSGVRM
Trigger: CATCCTCACGCCACTCATGCACAACGGCAAGCTCGC...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGGCGAGCTTGCCGTTGTaGATGAGTGGCGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLASLPL*MSGVRM
Trigger: CATCCTCACGCCACTCATGCACAACGGCAAGCTCGC...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGGGCTTCCGCTTCTGCTaGAGCGTTGGGGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEGFRFC*SVGVDS
Trigger: AGAGTCAACCCCAACGCTGCAGCAGAAGCGGAAGCC...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGGCTTCCGCTTCTGCTaGAGCGTTGGGGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLGFRFC*SVGVDS
Trigger: AGAGTCAACCCCAACGCTGCAGCAGAAGCGGAAGCC...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCTGGGCTTCCGCTTCTaGTGCAGCGTTGGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: FLVWWVLEAVENLAELSGLGFRF*CSVGVD
Trigger: GTCAACCCCAACGCTGCAGCAGAAGCGGAAGCCCAG...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGGCGGGTTGTCTCCCCTaGCAAAGCTCTGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPERAGCLP*QSSGFW
Trigger: CCAGAAACCAGAGCTTTGGCAGGGGAGACAACCCGC...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCATGGAGTCCACCCTCTaGGGGGCGGGCGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFMESTL*GAGGGL
Trigger: CAACCCGCCGCCCGCCCCGCAGAGGGTGGACTCCAT...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGTTTGCTGTCTCACATaGAAGGTGAAATGGGATGGC +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVVCCLT*KVKWDG
Trigger: GCCATCCCATTTCACCTTGCATGTGAGACAGCAAAC...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTTCTTTGTGTGCACTaGACGTGTGTGCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQFLCVH*TCVLCT
Trigger: TGTGCACAGCACACACGTGCAGTGCACACAAAGAAA...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTGTCTGACACATAGGTaGTCAAGAAAGGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQCLTHR*SRKASV
Trigger: GACACTGGCCTTTCTTGAGCACCTATGTGTCAGACA...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR GCA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGGACCCACATTCCCTTTaGGCAGAGGCCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FLVWWVLEAVENLAELSGDPHSL*AEAWRW
Trigger: CCACCTCCAGGCCTCTGCGCAAAGGGAATGTGGGTC...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CCA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGGGGCTCGGAGCGAACTaGTACAGCGTGTATCCCATT +
Preference number: 4 (lower is better)
Translates to: WVLEAVENLAELSGHLALGLGAN*YSVYPI
Trigger: AATGGGATACACGCTGTACCAGTTCGCTCCGAGCCC...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTCAACGTTGGCATGTTTaGCATCATATGGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSQRWHV*HHMGIW
Trigger: CCAGATGCCCATATGATGCCAAACATGCCAACGTTG...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCCAAACAGTGCAACGTTaGCATGTTTGGCATCATATG +
Preference number: 4 (lower is better)
Translates to: VPLCPREEDPASSALPQAQTVQR*HVWHHM
Trigger: CATATGATGCCAAACATGCCAACGTTGCACTGTTTG...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGGCCAGCACAGCAACCTaGCCTGGGCTTAGGAACTCG +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELASTAT*PGLRNS
Trigger: CGAGTTCCTAAGCCCAGGCCAGGTTGCTGTGCTGGC...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGAAGTCAGTCTGCTGTTaGGTGATAAATGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVKSVCC*VINGCR
Trigger: CCTGCAGCCATTTATCACCCAACAGCAGACTGACTT...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCAGAGTGGTGGCCTGGTaGCTTCTCGTGAGCGAGTTC +
Preference number: 4 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFRVVAW*LLVSEF
Trigger: GAACTCGCTCACGAGAAGCCACCAGGCCACCACTCT...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCTTGAGAGTGGTGGCCTaGTGGCTTCTCGTGAGCGAG +
Preference number: 4 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFLRVVA*WLLVSE
Trigger: CTCGCTCACGAGAAGCCACCAGGCCACCACTCTCAA...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCCAAAGCTCTGGTTTCTaGAGAGGTGAGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLQSSGF*RGERNW
Trigger: CCAATTCCTCTCACCTCTCCAGAAACCAGAGCTTTG...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTCAAAGCTCTGGTTTCTaGAGAGGTGAGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSQSSGF*RGERNW
Trigger: CCAATTCCTCTCACCTCTCCAGAAACCAGAGCTTTG...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGCATCATTGGGCTTCATaGATGTGGAAAGGGGAGCAA +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQHHWAS*MWKGEQ
Trigger: TTGCTCCCCTTTCCACATCCATGAAGCCCAATGATG...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGCATCATTGGGCTTCATaGATGTGGAAAGGGGAGCAA +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLHHWAS*MWKGEQ
Trigger: TTGCTCCCCTTTCCACATCCATGAAGCCCAATGATG...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGCATCATTGGGCTTCATaGATGTGGAAAGGGGAGCAA +
Preference number: 4 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSHHWAS*MWKGEQ
Trigger: TTGCTCCCCTTTCCACATCCATGAAGCCCAATGATG...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCACATCATTGGGCTTCATaGATGTGGAAAGGGGAGCAA +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAAHHWAS*MWKGEQ
Trigger: TTGCTCCCCTTTCCACATCCATGAAGCCCAATGATG...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGCAGGCCTTCTTGGTCTaGTGGGTACTCGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: WVLEAVENLAELSGHLALQAFLV*WVLEAV
Trigger: AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGCGTCCCGTGAAGTTGTaGACAAAATGTTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLRPVKL*TKCFSF
Trigger: GAAACTGAAACATTTTGTCCACAACTTCACGGGACG...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGCAAGGTGAAATGGGATaGCATATTGCAAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVQGEMG*HIASWC
Trigger: GCACCAGCTTGCAATATGCCATCCCATTTCACCTTG...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCCTGCTCTCTAGCCAGTaGACGCAGCAGAAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLALLSSQ*TQQKRG
Trigger: TCCTCTTTTCTGCTGCGTCCACTGGCTAGAGAGCAG...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTTGCCATGCGAAATACTaGTTGGCTCAGAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSCHAKY*LAQNLL
Trigger: CAGAAGATTCTGAGCCAATCAGTATTTCGCATGGCA...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACGATGATTCCCTTCTCTaGTCCCAGAAAAACCACAGT +
Preference number: 4 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYDDSLL*SQKNHS
Trigger: ACTGTGGTTTTTCTGGGATCAGAGAAGGGAATCATC...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR TCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGGATGATTCCCTTCTCTaGTCCCAGAAAAACCACAGT +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQDDSLL*SQKNHS
Trigger: ACTGTGGTTTTTCTGGGATCAGAGAAGGGAATCATC...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR TCA 90 bp CCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCGACTCATACCCCTCTTaGGCCGTCGAATCTGATGTG +
Preference number: 4 (lower is better)
Translates to: PAVANLHQTTRPSFREYPDSYPS*AVESDV
Trigger: CACATCAGATTCGACGGCTCAAGAGGGGTATGAGTC...GGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR TCA 90 bp CCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCGCTGGTCGTGGCCTTTaGGGTAACTTTCCCGAATCA +
Preference number: 4 (lower is better)
Translates to: PAVANLHQTTRPSFREYPAGRGL*GNFPES
Trigger: TGATTCGGGAAAGTTACCTCAAAGGCCACGACCAGC...GGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp CCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTTTGGGTCTTTGGATTaGGTGTCCCCAAAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PAVANLHQTTRPSFREYPFGSLD*VSPKRP
Trigger: CGGCCTCTTTGGGGACACTCAATCCAAAGACCCAAA...GGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGAGGAGCAGAAATCTATaGCATAGTTGCCCAACATGG +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLRSRNL*HSCPTW
Trigger: CCATGTTGGGCAACTATGTCATAGATTTCTGCTCCT...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGGAGCTGTTCATAGGATaGTATTTGGAAGAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLELFIG*YLEESF
Trigger: AAAGGACTCTTCCAAATATCATCCTATGAACAGCTC...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGTGGATTCCACTTCGGTaGGTCCCCTTGGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLWIPLR*VPLVVS
Trigger: AGACACCACCAAGGGGACTCACCGAAGTGGAATCCA...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGCTCCGGGCCGCGGGCTaGGCTCTCTCCTTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: KPSLATSREVVDKMFQFLLRAAG*ALSFAS
Trigger: GCTTGCGAAGGAGAGAGCGCAGCCCGCGGCCCGGAG...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGTGGATGTCCAGCCTGTaGCTCTGTGTGGTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLWMSSL*LCVVFR
Trigger: ACGGAACACCACACAGAGGCACAGGCTGGACATCCA...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTTGGGTGATAAATGGCTaGAGGCACCACCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVWVING*RHHLPL
Trigger: TAAAGGAAGGTGGTGCCTGCAGCCATTTATCACCCA...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGCTCAAAAGTCAGTCTaGTGTTGGGTGATAAATGGC +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLAQKSV*CWVING
Trigger: GCCATTTATCACCCAACAGCAGACTGACTTTTGAGC...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGCTCAAAAGTCAGTCTaGTGTTGGGTGATAAATGGC +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAAAQKSV*CWVING
Trigger: GCCATTTATCACCCAACAGCAGACTGACTTTTGAGC...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCCCCCAAAGGGTCTGTaGTGTCAGGTGAGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEPPKGL*CQVSQA
Trigger: TGCTTGACTCACCTGACAGCACAGACCCTTTGGGGG...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR GCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCCCCCAAAGGGTCTGTaGTGTCAGGTGAGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLPPKGL*CQVSQA
Trigger: TGCTTGACTCACCTGACAGCACAGACCCTTTGGGGG...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR GCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTTCCTTCTCCTTGCGCTaGACCACAGCCACGTCTTTG +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLSFSLR*TTATSL
Trigger: CAAAGACGTGGCTGTGGTGCAGCGCAAGGAGAAGGA...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGTCCTTCTCCTTGCGCTaGACCACAGCCACGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLSFSLR*TTATSL
Trigger: CAAAGACGTGGCTGTGGTGCAGCGCAAGGAGAAGGA...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGGTGAGTCCCCGCCGTTaGAAACCTTCACCAAACCAC +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLVSPRR*KPSPNH
Trigger: GTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCAC...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGATGGGGTAGGTATGTaGTTTTGGCTCATGTTTGTG +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAADGVGM*FWLMFV
Trigger: CACAAACATGAGCCAAAAGCACATACCTACCCCATC...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGAATGCCCATTCAGTaGCACAAAGGAATTGTGACA +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAAGMPIQ*HKGIVT
Trigger: TGTCACAATTCCTTTGTGGCACTGAATGGGCATTCC...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp AGGCAGTGTGAATTGGAGGGTGTGGTGCTGCCCAGCGTTCTCAGGCTGTCGCATTGCACTGCACGTGTGTaGTGTGCACATGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RQCELEGVVLPSVLRLSHCTARV*CAHGLE
Trigger: CTCCAAGCCATGTGCACAGCACACACGTGCAGTGCA...ATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGACAGATTGTATCAGGTaGTTTGATCCAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQTDCIR*FDPSWH
Trigger: GTGCCAGCTTGGATCAAAGCACCTGATACAATCTGT...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTTTCCGTCCTGGCTTGTaGCCCACAAACACCGGATAC +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLFRPGL*PTNTGY
Trigger: GTATCCGGTGTTTGTGGGCCACAAGCCAGGACGGAA...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCTGTGGTGTTCCGTCCTaGCTTGTGGCCCACAAACAC +
Preference number: 4 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTCGVPS*LVAHKH
Trigger: GTGTTTGTGGGCCACAAGCCAGGACGGAACACCACA...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCGCCTGTGCCTCTGTGTaGTGTTCCGTCCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGACASV*CSVLAC
Trigger: ACAAGCCAGGACGGAACACCACACAGAGGCACAGGC...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGGCCTGTGCCTCTGTGTaGTGTTCCGTCCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: FLVWWVLEAVENLAELSGACASV*CSVLAC
Trigger: ACAAGCCAGGACGGAACACCACACAGAGGCACAGGC...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTATGTTTGGCATCATATaGGCATCTGGCCATTCCGCT +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVMFGII*ASGHSA
Trigger: AGCGGAATGGCCAGATGCCCATATGATGCCAAACAT...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTCGTTCATCAGGAACTaGTGTCCAGGTGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLASFIRN*CPGGIR
Trigger: CCTGATTCCACCTGGACACCAGTTCCTGATGAACGA...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCCCGGCTTTGGGTCTTTaGATTGAGTGTCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLAPALGL*IECPQR
Trigger: TCTTTGGGGACACTCAATCCAAAGACCCAAAGCCGG...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCCGTCAGGTCCAGGTaGTGCTGGTCTGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLAVRSR*CWSALM
Trigger: CATTAAAGCAGACCAGCACCACCTGGACCTGACGGC...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGGCCGTCAGGTCCAGGTaGTGCTGGTCTGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLAVRSR*CWSALM
Trigger: CATTAAAGCAGACCAGCACCACCTGGACCTGACGGC...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCCGCGGCTGCCGCGGCTaGGCTTCCGCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCRGCRG*ASASAA
Trigger: TGCAGCAGAAGCGGAAGCCCAGCCGCGGCAGCCGCG...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGGCATTGATGAGGTTCTaGTTCCTCTCCCACTCGCGG +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEALMRF*FLSHSR
Trigger: CCGCGAGTGGGAGAGGAACCAGAACCTCATCAATGC...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTCGCTCATTTTGGGCTaGTCCACGTACTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PAVANLHQTTRPSFREYPSLILG*STYSCW
Trigger: CCAGCATGAGTACGTGGACCAGCCCAAAATGAGCGA...GGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGTCCTCCAGCGCCATCTaGGCCACCTCGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELSSSAI*ATSLIL
Trigger: CAAAATGAGCGAGGTGGCCCAGATGGCGCTGGAGGA...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCAGAGTGGTGGCCTGGTaGCTTCTCGTGAGCGAGTTC +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGRVVAW*LLVSEF
Trigger: GAACTCGCTCACGAGAAGCCACCAGGCCACCACTCT...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGGCCTTCTTGGTCTGGTaGGTACTCGAGGCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEAFLVW*VLEAVE
Trigger: CTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGC...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGGCCTTCTTGGTCTGGTaGGTACTCGAGGCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLAFLVW*VLEAVE
Trigger: CTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGC...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTCAGGCCTTCTTGGTCTaGTGGGTACTCGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLQAFLV*WVLEAV
Trigger: AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGTTGTGTTTTGCAGGTTaGAACGCAAACCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLLCFAG*NANPVW
Trigger: CCAGACTGGGTTTGCGTTCCAACCTGCAAAACACAA...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAAATCTTTCAGAGGGCTaGAAGTGGGGCAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPNLSEG*KWGRGW
Trigger: CCACCCTCTGCCCCACTTCCAGCCCTCTGAAAGATT...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp AGGCAGTGTGAATTGGAGGGTGTGGTGCTGCCCAGCGTTCTCAGGCTGTCGCATGTGAATTGGAGGGTGTaGTGCTGCCCAGCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RQCELEGVVLPSVLRLSHVNWRV*CCPAFS
Trigger: TGAGAACGCTGGGCAGCACCACACCCTCCAATTCAC...ATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAATCACTCCTTCTCTaGTCTCGGGAGACGCATTTT +
Preference number: 4 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVESLLL*SRETHF
Trigger: AAAATGCGTCTCCCGAGACCAGAGAAGGAGTGATTC...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503865.1
CDS-3UTR TCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGTCATTCTTACAAACCTaGGCCACTCTTGGGAAAACT +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVSFLQT*ATLGKT
Trigger: AGTTTTCCCAAGAGTGGCTCAGGTTTGTAAGAATGA...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCATCATTCTTACAAACCTaGGCCACTCTTGGGAAAACT +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAASFLQT*ATLGKT
Trigger: AGTTTTCCCAAGAGTGGCTCAGGTTTGTAAGAATGA...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCAGCTGCATGCCCATaGTCCTTTTGTCTTCGACTC +
Preference number: 4 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTPAACP*SFCLRL
Trigger: GAGTCGAAGACAAAAGGATCATGGGCATGCAGCTGG...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR TCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGACTCATACCCCTCTTaGGCCGTCGAATCTGATGTG +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLDSYPS*AVESDV
Trigger: CACATCAGATTCGACGGCTCAAGAGGGGTATGAGTC...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR TCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGACTCATACCCCTCTTaGGCCGTCGAATCTGATGTG +
Preference number: 4 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFDSYPS*AVESDV
Trigger: CACATCAGATTCGACGGCTCAAGAGGGGTATGAGTC...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR TCA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCGCTGGTCGTGGCCTTTaGGGTAACTTTCCCGAATCA +
Preference number: 4 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTAGRGL*GNFPES
Trigger: TGATTCGGGAAAGTTACCTCAAAGGCCACGACCAGC...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGGCTGGTCGTGGCCTTTaGGGTAACTTTCCCGAATCA +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPERAGRGL*GNFPES
Trigger: TGATTCGGGAAAGTTACCTCAAAGGCCACGACCAGC...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGGCTGGTCGTGGCCTTTaGGGTAACTTTCCCGAATCA +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLAGRGL*GNFPES
Trigger: TGATTCGGGAAAGTTACCTCAAAGGCCACGACCAGC...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGTTTGGGTCTTTGGATTaGGTGTCCCCAAAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLFGSLD*VSPKRP
Trigger: CGGCCTCTTTGGGGACACTCAATCCAAAGACCCAAA...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGTTTGTGATGATAACTaGAGTCTTTTGTGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAAVCDDN*SLLWVR
Trigger: TCGGACCCACAAAAGACTTCAGTTATCATCACAAAC...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCATCATTCCTACATGTGTaGTTGTCTCTTTGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAASFLHV*LSLWGK
Trigger: TTTCCCCCAAAGAGACAAGCACACATGTAGGAATGA...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGGTCATAGGCACAGACTaGAGACCCAGGGATGCTGTT +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEVIGTD*RPRDAV
Trigger: AACAGCATCCCTGGGTCTGCAGTCTGTGCCTATGAC...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCGTCAGGTCCAGGTGGTaGTGGTCTGCTTTAATGAGC +
Preference number: 4 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTVRSRW*WSALMS
Trigger: GCTCATTAAAGCAGACCAGCACCACCTGGACCTGAC...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGGCATTTCCAGCCGCTTaGTTAGACCGGTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLAFPAA*LDRSET
Trigger: TGTCTCAGACCGGTCTAAGCAAGCGGCTGGAAATGC...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGGCGGCGACTACTTTCTaGGATGCAAACGCGATGTGT +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEAATTF*DANAMC
Trigger: ACACATCGCGTTTGCATCCCAGAAAGTAGTCGCCGC...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGGAAGTCAGTCACTGTaGCTGAGTATAGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLGSQSL*LSIVFH
Trigger: ATGGAAAACTATACTCAGCCACAGTGACTGACTTCC...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTATCCATCCACAATATaGGTCTCTGGAGGCAATACA +
Preference number: 4 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYYPSTI*VSGGNT
Trigger: TGTATTGCCTCCAGAGACCCATATTGTGGATGGATA...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGTATCCATCCACAATATaGGTCTCTGGAGGCAATACA +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLYPSTI*VSGGNT
Trigger: TGTATTGCCTCCAGAGACCCATATTGTGGATGGATA...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGCTGTTGGGTGATAAATaGCTGCAGGCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPERLLGDK*LQAPPS
Trigger: GGAAGGTGGTGCCTGCAGCCATTTATCACCCAACAG...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CCA 90 bp CCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCCCGGCTTTGGGTCTTTaGATTGAGTGTCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PAVANLHQTTRPSFREYPPALGL*IECPQR
Trigger: TCTTTGGGGACACTCAATCCAAAGACCCAAAGCCGG...GGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGGCATTGATGAGGTTCTaGTTCCTCTCCCACTCGCGG +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELALMRF*FLSHSR
Trigger: CCGCGAGTGGGAGAGGAACCAGAACCTCATCAATGC...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGGCATTGATGAGGTTCTaGTTCCTCTCCCACTCGCGG +
Preference number: 4 (lower is better)
Translates to: FLVWWVLEAVENLAELSGALMRF*FLSHSR
Trigger: CCGCGAGTGGGAGAGGAACCAGAACCTCATCAATGC...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGTCGCTCATTTTGGGCTaGTCCACGTACTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAESLILG*STYSCW
Trigger: CCAGCATGAGTACGTGGACCAGCCCAAAATGAGCGA...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTCCACCTCGCTCATTTTaGGCTGGTCCACGTACTCAT +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLPPRSF*AGPRTH
Trigger: ATGAGTACGTGGACCAGCCCAAAATGAGCGAGGTGG...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGACAAGGTTCACCCCATaGTTGGGACTCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLTRFTP*LGLLLL
Trigger: CAGCAGCAAGAGTCCCAACCATGGGGTGAACCTTGT...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGACAAGGTTCACCCCATaGTTGGGACTCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPERTRFTP*LGLLLL
Trigger: CAGCAGCAAGAGTCCCAACCATGGGGTGAACCTTGT...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGGAGCAAAGGATGGTTTaGGGGGTACGTCCGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLEQRMV*GVRPAL
Trigger: TAAAGCCGGACGTACCCCCCAAACCATCCTTTGCTC...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGGAGCAAAGGATGGTTTaGGGGGTACGTCCGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPEREQRMV*GVRPAL
Trigger: TAAAGCCGGACGTACCCCCCAAACCATCCTTTGCTC...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAATGTACACGCATCATTaGGCTTCATGGATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAAMYTHH*ASWMWK
Trigger: TTTCCACATCCATGAAGCCCAATGATGCGTGTACAT...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCATGTACACGCATCATTaGGCTTCATGGATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLMYTHH*ASWMWK
Trigger: TTTCCACATCCATGAAGCCCAATGATGCGTGTACAT...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGATGTACACGCATCATTaGGCTTCATGGATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLMYTHH*ASWMWK
Trigger: TTTCCACATCCATGAAGCCCAATGATGCGTGTACAT...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCAGGCCTTCTTGGTCTaGTGGGTACTCGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGQAFLV*WVLEAV
Trigger: AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGACCTGTTGTAGGGTGTaGGGGAAAGTGAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: WVLEAVENLAELSGHLALTCCRV*GKVKEE
Trigger: CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGT...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGCGTCCCGTGAAGTTGTaGACAAAATGTTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVRPVKL*TKCFSF
Trigger: GAAACTGAAACATTTTGTCCACAACTTCACGGGACG...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAACGCAAACCCAGTCTaGCCACGTCCCGTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELNANPV*PRPVKL
Trigger: CAACTTCACGGGACGTGGCCAGACTGGGTTTGCGTT...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCATAGTTGCCCAACATaGCATTTATCTGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGHSCPT*HLSAAT
Trigger: TGTTGCAGCAGATAAATGCCATGTTGGGCAACTATG...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGTTCGGTGAGTCCCCTTaGTGGTGTCTGCGCCGATTA +
Preference number: 4 (lower is better)
Translates to: FLVWWVLEAVENLAELSGFGESP*WCLRRL
Trigger: TAATCGGCGCAGACACCACCAAGGGGACTCACCGAA...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGTATAATTGGTGCCTTTaGTGGAAAGTAGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVYNWCL*WKVGQT
Trigger: AGTCTGCCCTACTTTCCACCAAAGGCACCAATTATA...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCCCACTGTCTTTTCATTaGAATGGAGGCTTCAACGGC +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLAPLSFH*NGGFNG
Trigger: GCCGTTGAAGCCTCCATTCCAATGAAAAGACAGTGG...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513137.5
3UTR CAA 72 bp GTGGTTCCAGTTGGCACAACTAGAAGGCAGTGTGAATaGGAGGGTGTGGTGCTGCCCAGCGTTCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VVPVGTTRRQCE*EGVVLPSVLRL
Trigger: CAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCTTCTAGTTGTGCCAACTGGAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCAAGACTCCGGTAAATaGCTGCGTCAATGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLQDSGK*LRQWQG
Trigger: TCCTTGCCATTGACGCAGTCATTTACCGGAGTCTTG...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCGATGATTCCCTTCTCTaGTCCCAGAAAAACCACAGT +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLADDSLL*SQKNHS
Trigger: ACTGTGGTTTTTCTGGGATCAGAGAAGGGAATCATC...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR TCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGCCAGCTGCATGCCCATaGTCCTTTTGTCTTCGACTC +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELPAACP*SFCLRL
Trigger: GAGTCGAAGACAAAAGGATCATGGGCATGCAGCTGG...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR TCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGGCTGGTCGTGGCCTTTaGGGTAACTTTCCCGAATCA +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELAGRGL*GNFPES
Trigger: TGATTCGGGAAAGTTACCTCAAAGGCCACGACCAGC...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTAGAGTTCACAGGATGTaGACATGGATTCCATTACAA +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGRVHRM*TWIPLQ
Trigger: TTGTAATGGAATCCATGTTCACATCCTGTGAACTCT...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGGTCTCCTTAACAGCTaGGGCAGTGATGCCTACAAA +
Preference number: 4 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFGLLNS*GSDAYK
Trigger: TTTGTAGGCATCACTGCCTCAGCTGTTAAGGAGACC...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTCTCCGGGCCGCGGGCTaGGCTCTCTCCTTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCLRAAG*ALSFAS
Trigger: GCTTGCGAAGGAGAGAGCGCAGCCCGCGGCCCGGAG...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp CTGGACAAGACAGCCGCTTACGTCAATGATGGGTGCTGCACTGCCAGTACTCTCTGGATGTCCAGCCTGTaGCTCTGTGTGGTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: LDKTAAYVNDGCCTASTLWMSSL*LCVVFR
Trigger: ACGGAACACCACACAGAGGCACAGGCTGGACATCCA...GAGAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp CCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCACTCCGGTAAATGACTaGGTCAATGGCAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: PAVANLHQTTRPSFREYPTPVND*VNGKEV
Trigger: GACTTCCTTGCCATTGACGCAGTCATTTACCGGAGT...GGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp AGGCAGTGTGAATTGGAGGGTGTGGTGCTGCCCAGCGTTCTCAGGCTGTCGCATCAACATACAGAGAGCTaGTTGCTCTGTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RQCELEGVVLPSVLRLSHQHTES*LLCPAA
Trigger: TGCAGCTGGACAGAGCAAGCAGCTCTCTGTATGTTG...ATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCACCAGACCATCTGTATTaGCACGCTCTATGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPPDHLY*HALCPA
Trigger: AGCAGGACATAGAGCGTGGCAATACAGATGGTCTGG...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAAATCTGATGTGGTTGTaGTGGGCAAGAGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPNLMWL*WARGNW
Trigger: CCAGTTCCCTCTTGCCCAGCACAACCACATCAGATT...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR GCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTCAGGTGGTGCTGGTCTaGTTTAATGAGCATCTTGGC +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLQVVLV*FNEHLG
Trigger: GCCAAGATGCTCATTAAAGCAGACCAGCACCACCTG...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGGTCAGGTCCAGGTGGTaGTGGTCTGCTTTAATGAGC +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELVRSRW*WSALMS
Trigger: GCTCATTAAAGCAGACCAGCACCACCTGGACCTGAC...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGGCGTTGAGGCTGGGCTaGCTCGAGACAGTCACGGCC +
Preference number: 4 (lower is better)
Translates to: KPSLATSREVVDKMFQFLALRLG*LETVTA
Trigger: GGCCGTGACTGTCTCGAGGCAGCCCAGCCTCAACGC...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCCAGCGTCCTCGGCTCTaGCGCAGGCCTTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFQRPRL*RRPSWS
Trigger: AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGAATGTATTTGTGTTTTaGAGGTTGGAACGCAAACCC +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVNVFVF*RLERKP
Trigger: GGGTTTGCGTTCCAACCTGCAAAACACAAATACATT...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGAATGTATTTGTGTTTTaGAGGTTGGAACGCAAACCC +
Preference number: 4 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQNVFVF*RLERKP
Trigger: GGGTTTGCGTTCCAACCTGCAAAACACAAATACATT...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCCCAGTCAACGTTTTTaGAGCATCCATTGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLPSQRF*SIHCGR
Trigger: CCGACCACAATGGATGCTGCAAAAACGTTGACTGGG...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTATGCGAAATACTGATTaGCTCAGAATCTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGMRNTD*LRIFWE
Trigger: TTCCCAGAAGATTCTGAGCCAATCAGTATTTCGCAT...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTAAACTACCTTTCCCATaGTGTTATACTCCACTGCTA +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGKLPFP*CYTPLL
Trigger: TAGCAGTGGAGTATAACACCATGGGAAAGGTAGTTT...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCCATCAGGGAACTCATTaGAGGTTGCATATCTTTCTA +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLHQGTH*RLHIFL
Trigger: TAGAAAGATATGCAACCTCCAATGAGTTCCCTGATG...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCAGTGTGATTCTGATATaGCCCAGCAGCTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFSVILI*PSSCVH
Trigger: GTGGACACAGCTGCTGGGCCATATCAGAATCACACT...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGTATCCATCCACAATATaGGTCTCTGGAGGCAATACA +
Preference number: 4 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLYPSTI*VSGGNT
Trigger: TGTATTGCCTCCAGAGACCCATATTGTGGATGGATA...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CCA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCACTGATGTGGTTGTGCTaGGCAAGAGGGAACTGGAAT +
Preference number: 4 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPLMWLC*ARGNWN
Trigger: ATTCCAGTTCCCTCTTGCCCAGCACAACCACATCAG...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR CCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCCGGCTTTGGGTCTTTaGATTGAGTGTCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEPALGL*IECPQR
Trigger: TCTTTGGGGACACTCAATCCAAAGACCCAAAGCCGG...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTAGGTCCAGGTGGTGCTaGTCTGCTTTAATGAGCATC +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLRSRWC*SALMSI
Trigger: GATGCTCATTAAAGCAGACCAGCACCACCTGGACCT...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGGTCCAGGTGGTGCTaGTCTGCTTTAATGAGCATC +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLRSRWC*SALMSI
Trigger: GATGCTCATTAAAGCAGACCAGCACCACCTGGACCT...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCGGGTTGACTCTGGGGTaGGGAGGGCCGTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTGLTLG*GGPSGP
Trigger: TGGACCTGACGGCCCTCCCCACCCCAGAGTCAACCC...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CACTGGACAAGACAGCCGCTTACGTCAATGATGGGTGCTGCACTGCCAGTACTCGCATTGATGAGGTTCTaGTTCCTCTCCCACTCGCGG +
Preference number: 4 (lower is better)
Translates to: HWTRQPLTSMMGAALPVLALMRF*FLSHSR
Trigger: CCGCGAGTGGGAGAGGAACCAGAACCTCATCAATGC...GAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGGCAGGACCACCACGCTaGGGATGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVAGPPR*GCGWGR
Trigger: CCTCCCCCAGCCACATCCCCAGCGTGGTGGTCCTGC...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCACCTCGCTCATTTTaGGCTGGTCCACGTACTCAT +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGPPRSF*AGPRTH
Trigger: ATGAGTACGTGGACCAGCCCAAAATGAGCGAGGTGG...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCTCCAGTGTGGCGGCCTaGTCCTCCAGCGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCSSVAA*SSSAIW
Trigger: CCAGATGGCGCTGGAGGACCAGGCCGCCACACTGGA...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCCCCGCTGTGGAACTTTaGGGGGCAGGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFPAVEL*GAGCPG
Trigger: ACCTGGACAGCCTGCCCCCCAAAGTTCCACAGCGGG...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCCAAAGCTCTGGTTTCTaGAGAGGTGAGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: PAVANLHQTTRPSFREYPQSSGF*RGERNW
Trigger: CCAATTCCTCTCACCTCTCCAGAAACCAGAGCTTTG...GGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGACATGCAAGGTGAAATaGGATGGCATATTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLTCKVK*DGILQA
Trigger: AGCTTGCAATATGCCATCCCATTTCACCTTGCATGT...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCGGTCGGCCTTGTACTTaGAGTTACTCGTTAATCACA +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLAGRPCT*SYSLIT
Trigger: TGTGATTAACGAGTAACTCCAAGTACAAGGCCGACC...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGTTCAAGTGGAGTTATTaGCTTACACAGAACAACCTC +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVFKWSY*LTQNNL
Trigger: GAGGTTGTTCTGTGTAAGCCAATAACTCCACTTGAA...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGCTTTGCGCAGAGGCCTaGAGGTGGGACACCCAAGCT +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEELCAEA*RWDTQA
Trigger: AGCTTGGGTGTCCCACCTCCAGGCCTCTGCGCAAAG...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR TCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTAATTTCTTCCGTGTGTaGTGTGTCTATATCAACAGT +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGNFFRV*CVYINS
Trigger: ACTGTTGATATAGACACATCACACACGGAAGAAATT...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCCCTTCTTGTCTTGGTaGTTATGGGAAGACACTGCC +
Preference number: 4 (lower is better)
Translates to: FLVWWVLEAVENLAELSGPFLSW*LWEDTA
Trigger: GGCAGTGTCTTCCCATAATCACCAAGACAAGAAGGG...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR TCA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCGCGGCCCAGTTTTCGTaGGTACCCCTGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFAAQFS*VPLCPR
Trigger: TCTGGGACACAGGGGTACTCACGAAAACTGGGCCGC...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTGCCGCGGGTGTGGTaGTGCTGGCCGCTGCTACAC +
Preference number: 4 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACVPRVW*CWPLLH
Trigger: GTGTAGCAGCGGCCAGCATCACCACACCCGCGGCAC...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGGGCATCAATGAGATATaGTGTGCCATTCTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLGINEI*CAILKA
Trigger: AGCTTTTAGAATGGCACATCATATCTCATTGATGCC...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGCCAGAAACCTTAGCCTaGAAAGTACATTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVPETLA*KVHSLF
Trigger: AAAAAGAGAATGTACTTTTCAGGCTAAGGTTTCTGG...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503865.1
CDS-3UTR TCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTCAAAAGCTCCAGCCTTaGAGTATGATCACCATGCAC +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLQKLQP*SMITMH
Trigger: GTGCATGGTGATCATACTTCAAGGCTGGAGCTTTTG...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR TCA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACAATATGACCTCCTCGTaGTTTTCAAGTGGAGTTATT +
Preference number: 4 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYNMTSS*FSSGVI
Trigger: AATAACTCCACTTGAAAATCACGAGGAGGTCATATT...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR TCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCAAAAGGATAGATTTCTaGGGTTCAGATAAGCTACCA +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLKRIDF*GSDKLP
Trigger: TGGTAGCTTATCTGAACCTCAGAAATCTATCCTTTT...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR GCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGTCCATCTGCAAACAGTaGAACGTTGGCATGTTTGGC +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLSICKQ*NVGMFG
Trigger: GCCAAACATGCCAACGTTGCACTGTTTGCAGATGGA...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGTCATCCATGAGCGGGTaGGTCTTGATGAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELSSMSG*VLMKFR
Trigger: CCTGAACTTCATCAAGACGCACCCGCTCATGGATGA...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGCCACGCTCTATGTCCTaGTCAAAAGTCAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELPRSMS*SKVSLL
Trigger: CAGCAGACTGACTTTTGAGCAGGACATAGAGCGTGG...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGGGCTTCCGCTTCTGCTaGAGCGTTGGGGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEEGFRFC*SVGVDS
Trigger: AGAGTCAACCCCAACGCTGCAGCAGAAGCGGAAGCC...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GCATATTGCAAGCTGGTGCCTTCACAGAAAGTCAGAACCATGGACAAAACCATGGCGTTGAGGCTGGGCTaGCTCGAGACAGTCACGGCC +
Preference number: 4 (lower is better)
Translates to: AYCKLVPSQKVRTMDKTMALRLG*LETVTA
Trigger: GGCCGTGACTGTCTCGAGGCAGCCCAGCCTCAACGC...CATGGTTTTGTCCATGGTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGAATTGGAGGGTGTGGTaGTGCCCAGCGTTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEENWRVW*CPAFSG
Trigger: GCCTGAGAACGCTGGGCAGCACCACACCCTCCAATT...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCAACGTTGGCATGTTTaGCATCATATGGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEQRWHV*HHMGIW
Trigger: CCAGATGCCCATATGATGCCAAACATGCCAACGTTG...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGAAGTCAGTCTGCTGTTaGGTGATAAATGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPERKSVCC*VINGCR
Trigger: CCTGCAGCCATTTATCACCCAACAGCAGACTGACTT...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGTGGGCAAGAGGGAACTaGAATGCCCATACACTGTGT +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELWARGN*NAHTLC
Trigger: ACACAGTGTATGGGCATTCCAGTTCCCTCTTGCCCA...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257414.12
CDS-3UTR CCA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGGAGCCCCGGCGCGAGTaGGTGAGCTCCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVEPRRE*VSSFSL
Trigger: CAAGGAGAAGGAGCTCACCCACTCGCGCCGGGGCTC...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCGCCGTTGTGCATGAGTaGCGTGAGGATGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCAVVHE*REDGLR
Trigger: CCGGAGGCCATCCTCACGCCACTCATGCACAACGGC...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGTCCTCCAGCGCCATCTaGGCCACCTCGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEESSSAI*ATSLIL
Trigger: CAAAATGAGCGAGGTGGCCCAGATGGCGCTGGAGGA...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGTCTTATACTCCAGTGTaGCGGCCTGGTCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEESYTPV*RPGPPA
Trigger: CGCTGGAGGACCAGGCCGCCACACTGGAGTATAAGA...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGCCCGCTGTGGAACTTTaGGGGGCAGGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KPSLATSREVVDKMFQFLPAVEL*GAGCPG
Trigger: ACCTGGACAGCCTGCCCCCCAAAGTTCCACAGCGGG...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGTTGAGAGTGGTGGCCTaGTGGCTTCTCGTGAGCGAG +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEELRVVA*WLLVSE
Trigger: CTCGCTCACGAGAAGCCACCAGGCCACCACTCTCAA...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCACAAAGCTCTGGTTTCTaGAGAGGTGAGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPQSSGF*RGERNW
Trigger: CCAATTCCTCTCACCTCTCCAGAAACCAGAGCTTTG...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCGCCTGGCCAGATGGCTaGGAGCTGTGCACCTGGATG +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCAWPDG*ELCTWM
Trigger: CATCCAGGTGCACAGCTCCCAGCCATCTGGCCAGGC...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCACCTGTTGTAGGGTGTaGGGGAAAGTGAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGTCCRV*GKVKEE
Trigger: CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGT...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACGTAGGTATGTGCTTTTaGCTCATGTTTGTGATGATA +
Preference number: 4 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYVGMCF*LMFVMI
Trigger: TATCATCACAAACATGAGCCAAAAGCACATACCTAC...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTGTAGGTATGTGCTTTTaGCTCATGTTTGTGATGATA +
Preference number: 4 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGVGMCF*LMFVMI
Trigger: TATCATCACAAACATGAGCCAAAAGCACATACCTAC...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCATTGTGTTTTGCAGGTTaGAACGCAAACCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPLCFAG*NANPVW
Trigger: CCAGACTGGGTTTGCGTTCCAACCTGCAAAACACAA...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGACTGGCAGGTATCAGTaGCACAGAATTAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLTGRYQ*HRIRMK
Trigger: TTTCATTCTAATTCTGTGCCACTGATACCTGCCAGT...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503865.1
CDS-3UTR CCA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGAAAAAGCAAGCCAAGTaGCTCGTCCATGCTATAGTG +
Preference number: 4 (lower is better)
Translates to: WVLEAVENLAELSGHLALKKQAK*LVHAIV
Trigger: CACTATAGCATGGACGAGCCACTTGGCTTGCTTTTT...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAATTGGTGCCTTTGGTaGAAAGTAGGGCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLNWCLW*KVGQTH
Trigger: GTGAGTCTGCCCTACTTTCCACCAAAGGCACCAATT...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGTCTGCACCCTTCCTATaGAGGTTCTACAGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLSAPFL*RFYSVS
Trigger: AGACACACTGTAGAACCTCCATAGGAAGGGTGCAGA...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CCA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCATGGGCAAGAGGGAACTaGAATGCCCTGTTTTCATCA +
Preference number: 4 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPWARGN*NALFSS
Trigger: TGATGAAAACAGGGCATTCCAGTTCCCTCTTGCCCA...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513137.5
3UTR CAA 72 bp TCCATGCTTCGCAGCACAGCCAAAGGGTGGTTCCAGTaGGCACAACTAGAAGGCAGTGTGAATTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SMLRSTAKGWFQ*AQLEGSVNWRV
Trigger: CACCCTCCAATTCACACTGCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGTGCCATGCGAAATACTaGTTGGCTCAGAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPERCHAKY*LAQNLL
Trigger: CAGAAGATTCTGAGCCAATCAGTATTTCGCATGGCA...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCCTGCCTGGAGAATGTTaGAATAAAAATGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLALPGEC*NKNESL
Trigger: GAGACTCTCATTTTTATTTCAACATTCTCCAGGCAG...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCATTCTTCCATCTGCTTaGCTCCAATCTTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFILPSA*LQSFRG
Trigger: CCCTCTGAAAGATTGGAGTCAAGCAGATGGAAGAAT...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCAATCACATCTGTAACTaGCTGGAGAATGTTGAAATA +
Preference number: 4 (lower is better)
Translates to: EDPASSALPQAFLVWWVLNHICN*LENVEI
Trigger: TATTTCAACATTCTCCAGGCAGTTACAGATGTGATT...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp TCCATGCTTCGCAGCACAGCCAAAGGGTGGTTCCAGTTGGCACAACTAGAAGGCCCAGACCATCTGTATTaGCACGCTCTATGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SMLRSTAKGWFQLAQLEGPDHLY*HALCPA
Trigger: AGCAGGACATAGAGCGTGGCAATACAGATGGTCTGG...GCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGGCATCTTGGCCGTGTTaGCGGGAGTGGCGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVASWPC*REWRAC
Trigger: GCAAGCTCGCCACTCCCGGCAACACGGCCAAGATGC...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGGATGGGGTAGGTATGTaGTTTTGGCTCATGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPERDGVGM*FWLMFV
Trigger: CACAAACATGAGCCAAAAGCACATACCTACCCCATC...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGATGGGGTAGGTATGTaGTTTTGGCTCATGTTTGTG +
Preference number: 4 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFDGVGM*FWLMFV
Trigger: CACAAACATGAGCCAAAAGCACATACCTACCCCATC...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GCATATTGCAAGCTGGTGCCTTCACAGAAAGTCAGAACCATGGACAAAACCATGGGTGATGCTGGCCGCTaGTACACGCTGCTAAGCGGG +
Preference number: 4 (lower is better)
Translates to: AYCKLVPSQKVRTMDKTMGDAGR*YTLLSG
Trigger: CCCGCTTAGCAGCGTGTAGCAGCGGCCAGCATCACC...CATGGTTTTGTCCATGGTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCAATGGGATGGCATATTaGAAGCTGGTGCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGNGMAY*KLVPSQ
Trigger: CTGTGAAGGCACCAGCTTGCAATATGCCATCCCATT...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGGCCACCACACTTAAATaGTGCCACAAAGCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEATTLK*CHKALV
Trigger: TACCAAAGCTTTGTGGCAGCATTTAAGTGTGGTGGC...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR GCA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCAAGTGGCTCGTCCATaGTATAGTGACTTCTATGGA +
Preference number: 4 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTQVARP*YSDFYG
Trigger: TCCATAGAAGTCACTATAGCATGGACGAGCCACTTG...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR GCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGGTAACTCAGTTACTCTaGACCCTTCCTATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLVTQLL*TLPMEV
Trigger: AACCTCCATAGGAAGGGTGCAGAGTAACTGAGTTAC...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGTTCCGTCCTGGCTTGTaGCCCACAAACACCGGATAC +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEEFRPGL*PTNTGY
Trigger: GTATCCGGTGTTTGTGGGCCACAAGCCAGGACGGAA...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAAGTCAGTCTGCTGTTaGGTGATAAATGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELKSVCC*VINGCR
Trigger: CCTGCAGCCATTTATCACCCAACAGCAGACTGACTT...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CCA 90 bp TCCATGCTTCGCAGCACAGCCAAAGGGTGGTTCCAGTTGGCACAACTAGAAGGCCCGGCTTTGGGTCTTTaGATTGAGTGTCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SMLRSTAKGWFQLAQLEGPALGL*IECPQR
Trigger: TCTTTGGGGACACTCAATCCAAAGACCCAAAGCCGG...GCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGGCCGTTGTGCATGAGTaGCGTGAGGATGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVAVVHE*REDGLR
Trigger: CCGGAGGCCATCCTCACGCCACTCATGCACAACGGC...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCAAAGCTCTGGTTTCTaGAGAGGTGAGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGQSSGF*RGERNW
Trigger: CCAATTCCTCTCACCTCTCCAGAAACCAGAGCTTTG...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTCACGGCCTGGCCAGATaGCTGGGAGCTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCHGLAR*LGAVHL
Trigger: CAGGTGCACAGCTCCCAGCCATCTGGCCAGGCCGTG...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGTGTGTGCTGTGCACATaGCTTGGAGACTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEECVLCT*LGDSSQ
Trigger: CTGGGAGGAGTCTCCAAGCCATGTGCACAGCACACA...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp TCCATGCTTCGCAGCACAGCCAAAGGGTGGTTCCAGTTGGCACAACTAGAAGGCGATGCCTACAAACACTaGACAAGACAGCCGCTTACG +
Preference number: 4 (lower is better)
Translates to: SMLRSTAKGWFQLAQLEGDAYKH*TRQPLT
Trigger: CGTAAGCGGCTGTCTTGTCCAGTGTTTGTAGGCATC...GCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTCTTTTCATTGGAATaGAGGCTTCAACGGCTACAC +
Preference number: 4 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPVFSLE*RLQRLH
Trigger: GTGTAGCCGTTGAAGCCTCCATTCCAATGAAAAGAC...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGATACCTCTCGGTGTTaGGAGGATAGTGACATAATG +
Preference number: 4 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFDTSRC*EDSDIM
Trigger: CATTATGTCACTATCCTCCCAACACCGAGAGGTATC...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR TCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGCAAAGTGTAGCAGTGTaGAATATAGCAGCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLQSVAV*NIAARL
Trigger: AAGCCTTGCTGCTATATTTCACACTGCTACACTTTG...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGCCAAAAACTTCAAGATaGTTCCCTTCTCTGATCCCA +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLPKTSR*FPSLIP
Trigger: TGGGATCAGAGAAGGGAATCATCTTGAAGTTTTTGG...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR TCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCCAAAAACTTCAAGATaGTTCCCTTCTCTGATCCCA +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEPKTSR*FPSLIP
Trigger: TGGGATCAGAGAAGGGAATCATCTTGAAGTTTTTGG...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR TCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGTTGAGCCGTCGAATCTaGTGTGGTTGTGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEELSRRI*CGCAGQ
Trigger: TTGCCCAGCACAACCACATCAGATTCGACGGCTCAA...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR TCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGGTCTGTGCTGTCAGGTaGGTCAAGCAGATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEEVCAVR*VKQMLP
Trigger: TGGAAGCATCTGCTTGACTCACCTGACAGCACAGAC...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR TCA 90 bp GCATATTGCAAGCTGGTGCCTTCACAGAAAGTCAGAACCATGGACAAAACCATGGTGAGTTGTAGGCGTTaGGGCTGGGCTGCCTCGAGA +
Preference number: 4 (lower is better)
Translates to: AYCKLVPSQKVRTMDKTMVSCRR*GWAASR
Trigger: TCTCGAGGCAGCCCAGCCTCAACGCCTACAACTCAC...CATGGTTTTGTCCATGGTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCTTTCAATGGGCTTTCTaGAGAGCTGTTCATAGGATG +
Preference number: 4 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFFQWAF*RAVHRM
Trigger: CATCCTATGAACAGCTCTTCAGAAAGCCCATTGAAA...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTCCTTCTCCTTGCGCTaGACCACAGCCACGTCTTTG +
Preference number: 4 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFSFSLR*TTATSL
Trigger: CAAAGACGTGGCTGTGGTGCAGCGCAAGGAGAAGGA...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCGGCTTCCGCTTCTGCTaGAGCGTTGGGGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTGFRFC*SVGVDS
Trigger: AGAGTCAACCCCAACGCTGCAGCAGAAGCGGAAGCC...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCAGAGTGGTGGCCTGGTaGCTTCTCGTGAGCGAGTTC +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTRVVAW*LLVSEF
Trigger: GAACTCGCTCACGAGAAGCCACCAGGCCACCACTCT...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGGAGCAAAGGATGGTTTaGGGGGTACGTCCGGCTTTA +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEEEQRMV*GVRPAL
Trigger: TAAAGCCGGACGTACCCCCCAAACCATCCTTTGCTC...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGATGTACACGCATCATTaGGCTTCATGGATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEMYTHH*ASWMWK
Trigger: TTTCCACATCCATGAAGCCCAATGATGCGTGTACAT...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGCATAGTTGCCCAACATaGCATTTATCTGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: LHQTTRPSFREYPCVPERHSCPT*HLSAAT
Trigger: TGTTGCAGCAGATAAATGCCATGTTGGGCAACTATG...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp GTACACAACTCAAGGTGTAAGGCACAAATTTACATGTGGAAAACAGGCTATTCAGAGGAGCGCCGCTGCTaGGTTCCGAGCGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VHNSRCKAQIYMWKTGYSEERRC*VPSAWA
Trigger: TGCCCAGGCGCTCGGAACCCAGCAGCGGCGCTCCTC...TGAATAGCCTGTTTTCCACATGTAAATTTGTGCCTTACACCTTGAGTTGTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCTGGCATATTGCAAGCTaGTGCCTTCACAGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGWHIAS*CLHRKS
Trigger: TGACTTTCTGTGAAGGCACCAGCTTGCAATATGCCA...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGAGCAGAAAAGAGGAATaGGACGTTAGTCCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLSRKEE*DVSPFS
Trigger: AGAAAAGGGACTAACGTCCCATTCCTCTTTTCTGCT...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCTGCTTTGATCCAAGCTaGCACAATGATACCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTCFDPS*HNDTCS
Trigger: AGAACAGGTATCATTGTGCCAGCTTGGATCAAAGCA...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR TCA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCAAAGTGTAGCAGTGTaGAATATAGCAGCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: EENEGESPPLQTFTKPRGQSVAV*NIAARL
Trigger: AAGCCTTGCTGCTATATTTCACACTGCTACACTTTG...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGCCTGGAGAATGTTaGAATAAAAATGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAELPGEC*NKNESL
Trigger: GAGACTCTCATTTTTATTTCAACATTCTCCAGGCAG...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGGTTTGTGATGATAACTaGAGTCTTTTGTGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: FLVWWVLEAVENLAELSGVCDDN*SLLWVR
Trigger: TCGGACCCACAAAAGACTTCAGTTATCATCACAAAC...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCAATCACATCTGTAACTaGCTGGAGAATGTTGAAATA +
Preference number: 4 (lower is better)
Translates to: WWVLEAVENLAELSGHLANHICN*LENVEI
Trigger: TATTTCAACATTCTCCAGGCAGTTACAGATGTGATT...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGCAACATACAGAGAGCTaGTTGCTCTGTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEEQHTES*LLCPAA
Trigger: TGCAGCTGGACAGAGCAAGCAGCTCTCTGTATGTTG...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCGCATTTCCAGCCGCTTaGTTAGACCGGTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFAFPAA*LDRSET
Trigger: TGTCTCAGACCGGTCTAAGCAAGCGGCTGGAAATGC...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGAATGTATTTGTGTTTTaGAGGTTGGAACGCAAACCC +
Preference number: 4 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLNVFVF*RLERKP
Trigger: GGGTTTGCGTTCCAACCTGCAAAACACAAATACATT...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGAAGAGGGAACTGGAATaGCCTGTTTTCATCACAAAT +
Preference number: 4 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEKRELE*PVFITN
Trigger: ATTTGTGATGAAAACAGGGCATTCCAGTTCCCTCTT...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTAAACTACCTTTCCCATaGTGTTATACTCCACTGCTA +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLKLPFP*CYTPLL
Trigger: TAGCAGTGGAGTATAACACCATGGGAAAGGTAGTTT...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGCATCAGGGAACTCATTaGAGGTTGCATATCTTTCTA +
Preference number: 4 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLHQGTH*RLHIFL
Trigger: TAGAAAGATATGCAACCTCCAATGAGTTCCCTGATG...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp AACAACAACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATGCAGGACCACCACGCTaGGGATGTGGCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NNNTAHGLQYVDSSFVHDAGPPR*GCGWGR
Trigger: CCTCCCCCAGCCACATCCCCAGCGTGGTGGTCCTGC...ATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTTGTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTTGCCGCAGGCCTTCTTaGTCTGGTGGGTACTCGAGG +
Preference number: 4 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCCRRPS*SGGYSR
Trigger: CCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCAACGCAAACCCAGTCTaGCCACGTCCCGTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCNANPV*PRPVKL
Trigger: CAACTTCACGGGACGTGGCCAGACTGGGTTTGCGTT...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCATGGTTTACAGTATGTaGACAGTTCCTTTGTTCATG +
Preference number: 4 (lower is better)
Translates to: PAVANLHQTTRPSFREYPMVYSM*TVPLFM
Trigger: CATGAACAAAGGAACTGTCCACATACTGTAAACCAT...GGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTTTTCATGTATTTTACTaGCAGGTATCAGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLFHVFY*QVSVAQ
Trigger: CTGTGCCACTGATACCTGCCAGTAAAATACATGAAA...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503865.1
CDS-3UTR CCA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCCCCATTTGTGACCGATaGGGCAGGTTTCTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFPICDR*GRFLVV
Trigger: CACTACCAGAAACCTGCCCCATCGGTCACAAATGGG...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR TCA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTGGAACCATGGCCTGTTaGAGATGGAGGGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCGTMAC*RWRALP
Trigger: AGGCAGTGCCCTCCATCTTCAACAGGCCATGGTTCC...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCCCAGCTGCATGCCCATaGTCCTTTTGTCTTCGACTC +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTPAACP*SFCLRL
Trigger: GAGTCGAAGACAAAAGGATCATGGGCATGCAGCTGG...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR TCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTTGAGCCGTCGAATCTaGTGTGGTTGTGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTLSRRI*CGCAGQ
Trigger: TTGCCCAGCACAACCACATCAGATTCGACGGCTCAA...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR TCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCGTCTGTGCTGTCAGGTaGGTCAAGCAGATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTVCAVR*VKQMLP
Trigger: TGGAAGCATCTGCTTGACTCACCTGACAGCACAGAC...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR TCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGGAGCTGTTCATAGGATaGTATTTGGAAGAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELELFIG*YLEESF
Trigger: AAAGGACTCTTCCAAATATCATCCTATGAACAGCTC...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTGGGAATCCCATTTGTaGCCGATGGGGCAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTWESHL*PMGQVS
Trigger: AGAAACCTGCCCCATCGGTCACAAATGGGATTCCCA...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR GCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCGAAAGCCAGGATGACTaGAATGGCCAAGAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTESQDD*NGQEGD
Trigger: GTCACCCTCTTGGCCATTGCAGTCATCCTGGCTTTC...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTGCGAGCTTGCCGTTGTaGATGAGTGGCGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCASLPL*MSGVRM
Trigger: CATCCTCACGCCACTCATGCACAACGGCAAGCTCGC...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCGTCAGGTCCAGGTGGTaGTGGTCTGCTTTAATGAGC +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCVRSRW*WSALMS
Trigger: GCTCATTAAAGCAGACCAGCACCACCTGGACCTGAC...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGCGGGTTGTCTCCCCTaGCAAAGCTCTGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACAGCLP*QSSGFW
Trigger: CCAGAAACCAGAGCTTTGGCAGGGGAGACAACCCGC...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCGATGGCCTCCGGCTTTaGGTCTTTGGATTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCDGLRL*VFGLSV
Trigger: GACACTCAATCCAAAGACCCAAAGCCGGAGGCCATC...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCCCACCTCGCTCATTTTaGGCTGGTCCACGTACTCAT +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCPPRSF*AGPRTH
Trigger: ATGAGTACGTGGACCAGCCCAAAATGAGCGAGGTGG...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CACTGGACAAGACAGCCGCTTACGTCAATGATGGGTGCTGCACTGCCAGTACTCATGTACACGCATCATTaGGCTTCATGGATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: HWTRQPLTSMMGAALPVLMYTHH*ASWMWK
Trigger: TTTCCACATCCATGAAGCCCAATGATGCGTGTACAT...GAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGAACGCAAACCCAGTCTaGCCACGTCCCGTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVNANPV*PRPVKL
Trigger: CAACTTCACGGGACGTGGCCAGACTGGGTTTGCGTT...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
3UTR CAA 72 bp ACGTTTTTGCAGCATCCATTGTGGTCGGCCTTGTACTaGGAGTTACTCGTTAATCACAGCAGGGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: TFLQHPLWSALY*ELLVNHSRDQP
Trigger: AGGCTGGTCCCTGCTGTGATTAACGAGTAACTCCAAGTACAAGGCCGACCACAATGGATGCTGCAAAAACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTAGAGTCTCCAGGAACTaGGCAGTTCAAGCGCGCCTT +
Preference number: 4 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCRVSRN*AVQARL
Trigger: AAGGCGCGCTTGAACTGCTCAGTTCCTGGAGACTCT...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGCCCTTCTTGTCTTGGTaGTTATGGGAAGACACTGCC +
Preference number: 4 (lower is better)
Translates to: KPSLATSREVVDKMFQFLPFLSW*LWEDTA
Trigger: GGCAGTGTCTTCCCATAATCACCAAGACAAGAAGGG...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR TCA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTTTGGGTCTTTGGATTaGGTGTCCCCAAAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVFGSLD*VSPKRP
Trigger: CGGCCTCTTTGGGGACACTCAATCCAAAGACCCAAA...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp AACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATAGAGTACCTGGTGGCTTCTCGTaGGCGAGTTCGTGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: NTAHGLQYVDSSFVHDRVPGGFS*ASSWGS
Trigger: GCTACCCCACGAACTCGCTCACGAGAAGCCACCAGG...TACTCTATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCTCTGGCCACGTCCCGTaGAGTTGTGGACAAAATGTT +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCSGHVP*SCGQNV
Trigger: AACATTTTGTCCACAACTTCACGGGACGTGGCCAGA...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp GCATATTGCAAGCTGGTGCCTTCACAGAAAGTCAGAACCATGGACAAAACCATGTGTGTTCATCTCCAATaGCGAGCGGAGAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: AYCKLVPSQKVRTMDKTMCVHLQ*RAEKGR
Trigger: TCTCCCCTTCTCCGCTCGTCATTGGAGATGAACACA...CATGGTTTTGTCCATGGTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCTCTCAGGCTGTCGCATaGCAACTATCACCACTGCAT +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCSQAVA*QLSPLH
Trigger: ATGCAGTGGTGATAGTTGTCATGCGACAGCCTGAGA...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCGCCAGTGTCCTTCTTTaGTATTCCCATGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTASVLL*YSHGST
Trigger: AGTGCTGCCATGGGAATATCAAAGAAGGACACTGGC...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR GCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCAGGTGTAGAAAACGTTaGCAGGACAACATCACGCCC +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCRCRKR*QDNITP
Trigger: GGGCGTGATGTTGTCCTGGCAACGTTTTCTACACCT...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp GAAGGCAACCACACTGATTATGGAGGCTCCACTTTTTCACTATCCAACTCAAAAGAAGATGGAGGGCACTaGCTCATCCATGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: EGNHTDYGGSTFSLSNSKEDGGH*LIHERV
Trigger: CACCCGCTCATGGATGAGGCAGTGCCCTCCATCTTC...TTTTGAGTTGGATAGTGAAAAAGTGGAGCCTCCATAATCAGTGTGGTTGCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGCGACTCCATCATAGCTaGATTTTTCAGAGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: QAFLVWWVLEAVENLAELRLHHS*IFQSCK
Trigger: TTTACAACTCTGAAAAATGCAGCTATGATGGAGTCG...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGGCTCAAAAGTCAGTCTaGTGTTGGGTGATAAATGGC +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEEAQKSV*CWVING
Trigger: GCCATTTATCACCCAACAGCAGACTGACTTTTGAGC...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGCCAGACCATCTGTATTaGCACGCTCTATGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KPSLATSREVVDKMFQFLPDHLY*HALCPA
Trigger: AGCAGGACATAGAGCGTGGCAATACAGATGGTCTGG...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTGAGTCCCCGCCGTTaGAAACCTTCACCAAACCAC +
Preference number: 4 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACVSPRR*KPSPNH
Trigger: GTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCAC...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGGACTACTTTCTGGGATaGAAACGCGATGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEEDYFLG*KRDVFI
Trigger: GATGAACACATCGCGTTTGCATCCCAGAAAGTAGTC...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCAGGGACCAGCCTGCCTaGATCTATTTCCATGTCATT +
Preference number: 4 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFRDQPA*IYFHVI
Trigger: AATGACATGGAAATAGATGCAGGCAGGCTGGTCCCT...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GCTACAGACCAGACAGTCCAAACACAAAGCTCAGAATTCCAGCTCCAACTTATTGGGCTCGGAGCGAACTaGTACAGCGTGTATCCCATT +
Preference number: 4 (lower is better)
Translates to: ATDQTVQTQSSEFQLQLIGLGAN*YSVYPI
Trigger: AATGGGATACACGCTGTACCAGTTCGCTCCGAGCCC...AATAAGTTGGAGCTGGAATTCTGAGCTTTGTGTTTGGACTGTCTGGTCTGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTGTTCTCAGGAACCATaGCCTGTTGAAGATGGAGGG +
Preference number: 4 (lower is better)
Translates to: KPSLATSREVVDKMFQFLCSQEP*PVEDGG
Trigger: CCCTCCATCTTCAACAGGCCATGGTTCCTGAGAACA...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCTGTTCTCAGGAACCATaGCCTGTTGAAGATGGAGGG +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCCSQEP*PVEDGG
Trigger: CCCTCCATCTTCAACAGGCCATGGTTCCTGAGAACA...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGCCACCTCGCTCATTTTaGGCTGGTCCACGTACTCAT +
Preference number: 4 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVPPRSF*AGPRTH
Trigger: ATGAGTACGTGGACCAGCCCAAAATGAGCGAGGTGG...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTACACAACTCAAGGTGTAAGGCACAAATTTACATGTGGAAAACAGGCTATTCACCCGCTGTGGAACTTTaGGGGGCAGGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VHNSRCKAQIYMWKTGYSPAVEL*GAGCPG
Trigger: ACCTGGACAGCCTGCCCCCCAAAGTTCCACAGCGGG...TGAATAGCCTGTTTTCCACATGTAAATTTGTGCCTTACACCTTGAGTTGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GCATATTGCAAGCTGGTGCCTTCACAGAAAGTCAGAACCATGGACAAAACCATGGAGCAAAGGATGGTTTaGGGGGTACGTCCGGCTTTA +
Preference number: 4 (lower is better)
Translates to: AYCKLVPSQKVRTMDKTMEQRMV*GVRPAL
Trigger: TAAAGCCGGACGTACCCCCCAAACCATCCTTTGCTC...CATGGTTTTGTCCATGGTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GCTACAGACCAGACAGTCCAAACACAAAGCTCAGAATTCCAGCTCCAACTTATTCAGGCCTTCTTGGTCTaGTGGGTACTCGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: ATDQTVQTQSSEFQLQLIQAFLV*WVLEAV
Trigger: AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG...AATAAGTTGGAGCTGGAATTCTGAGCTTTGTGTTTGGACTGTCTGGTCTGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCACCTGTTGTAGGGTGTaGGGGAAAGTGAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTTCCRV*GKVKEE
Trigger: CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGT...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGGTAGGTATGTGCTTTTaGCTCATGTTTGTGATGATA +
Preference number: 4 (lower is better)
Translates to: FLVWWVLEAVENLAELSGVGMCF*LMFVMI
Trigger: TATCATCACAAACATGAGCCAAAAGCACATACCTAC...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTGGGCAAGAGGGAACTaGAATGCCCATTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVWARGN*NAHSVP
Trigger: TGGCACTGAATGGGCATTCCAGTTCCCTCTTGCCCA...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GCTACAGACCAGACAGTCCAAACACAAAGCTCAGAATTCCAGCTCCAACTTATTCACCCACAACAACACTaGGGTCCATGCTTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: ATDQTVQTQSSEFQLQLIHPQQH*GPCFAA
Trigger: TGCTGCGAAGCATGGACCCCAGTGTTGTTGTGGGTG...AATAAGTTGGAGCTGGAATTCTGAGCTTTGTGTTTGGACTGTCTGGTCTGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTTGCAGCATCCATTGTaGTCGGCCTTGTACTTGGAG +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTLQHPL*SALYLE
Trigger: CTCCAAGTACAAGGCCGACCACAATGGATGCTGCAA...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCCTCATACTTGCTGGGTaGGCCTCAGGGAATCACTTA +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCLILAG*ASGNHL
Trigger: TAAGTGATTCCCTGAGGCCCACCCAGCAAGTATGAG...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
3UTR CAA 72 bp CAGTCAACGTTTTTGCAGCATCCATTGTGGTCGGCCTaGTACTTGGAGTTACTCGTTAATCACAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QSTFLQHPLWSA*YLELLVNHSRD
Trigger: GTCCCTGCTGTGATTAACGAGTAACTCCAAGTACAAGGCCGACCACAATGGATGCTGCAAAAACGTTGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGCCAAAAACTTCAAGATaGTTCCCTTCTCTGATCCCA +
Preference number: 4 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEEPKTSR*FPSLIP
Trigger: TGGGATCAGAGAAGGGAATCATCTTGAAGTTTTTGG...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR TCA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTATAGGCCAGAGACCTaGCCAGGCAATGAACTGATA +
Preference number: 4 (lower is better)
Translates to: KPSLATSREVVDKMFQFLYRPET*PGNELI
Trigger: TATCAGTTCATTGCCTGGTCAGGTCTCTGGCCTATA...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp TCCATGCTTCGCAGCACAGCCAAAGGGTGGTTCCAGTTGGCACAACTAGAAGGCAGGATATCACCGTATTaGAATAATCTAAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SMLRSTAKGWFQLAQLEGRISPY*NNLREA
Trigger: TGCTTCCCTTAGATTATTTCAATACGGTGATATCCT...GCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCTCCATCTGCAAACAGTaGAACGTTGGCATGTTTGGC +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCSICKQ*NVGMFG
Trigger: GCCAAACATGCCAACGTTGCACTGTTTGCAGATGGA...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGACTCCGGTAAATGACTaGGTCAATGGCAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: KPSLATSREVVDKMFQFLTPVND*VNGKEV
Trigger: GACTTCCTTGCCATTGACGCAGTCATTTACCGGAGT...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCAACCATTTTGAATCGTaGTTGACGGTCCGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCNHFES*LTVRRV
Trigger: TACCCTGCGGACCGTCAAGCACGATTCAAAATGGTT...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp GCATATTGCAAGCTGGTGCCTTCACAGAAAGTCAGAACCATGGACAAAACCATGCTTGCTCTGTCCAGCTaGATGCCCATGATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: AYCKLVPSQKVRTMDKTMLALSS*MPMILL
Trigger: CAAAAGGATCATGGGCATGCAGCTGGACAGAGCAAG...CATGGTTTTGTCCATGGTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCTGGGTGATAAATGGCTaGAGGCACCACCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCWVING*RHHLPL
Trigger: TAAAGGAAGGTGGTGCCTGCAGCCATTTATCACCCA...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGCAGGTGGTGCTGGTCTaGTTTAATGAGCATCTTGGC +
Preference number: 4 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVQVVLV*FNEHLG
Trigger: GCCAAGATGCTCATTAAAGCAGACCAGCACCACCTG...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCATGTTTGGCATCATATaGGCATCTGGCCATTCCGCT +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTMFGII*ASGHSA
Trigger: AGCGGAATGGCCAGATGCCCATATGATGCCAAACAT...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTCTGTTGGGTGATAAATaGCTGCAGGCACCACCTTCC +
Preference number: 4 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACLLGDK*LQAPPS
Trigger: GGAAGGTGGTGCCTGCAGCCATTTATCACCCAACAG...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CCA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTACAAGGTTCACCCCATaGTTGGGACTCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACTRFTP*LGLLLL
Trigger: CAGCAGCAAGAGTCCCAACCATGGGGTGAACCTTGT...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCTTGTGTTTTGCAGGTTaGAACGCAAACCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCLCFAG*NANPVW
Trigger: CCAGACTGGGTTTGCGTTCCAACCTGCAAAACACAA...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCAGAAGTGATGGGTTGTaGGGGTGTAGGAATGTGGAT +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTRSDGL*GCRNVD
Trigger: ATCCACATTCCTACACCCCCACAACCCATCACTTCT...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCTTTCAACCATTTTaGATCGTGCTTGACGGTCCG +
Preference number: 4 (lower is better)
Translates to: KPSLATSREVVDKMFQFLFFQPF*IVLDGP
Trigger: CGGACCGTCAAGCACGATTCAAAATGGTTGAAAGAA...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTTCTCCAGGACTCTTTaGGATCCTCCCATATCATTC +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTFSRTL*DPPISF
Trigger: GAATGATATGGGAGGATCTCAAAGAGTCCTGGAGAA...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR GCA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTAATCTGATGTGGTTGTaGTGGGCAAGAGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACNLMWL*WARGNW
Trigger: CCAGTTCCCTCTTGCCCAGCACAACCACATCAGATT...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR GCA 90 bp TCCATGCTTCGCAGCACAGCCAAAGGGTGGTTCCAGTTGGCACAACTAGAAGGCAAACAACAACAACACTaGTCATGGTTTACAGTATGT +
Preference number: 4 (lower is better)
Translates to: SMLRSTAKGWFQLAQLEGKQQQH*SWFTVC
Trigger: ACATACTGTAAACCATGAGCAGTGTTGTTGTTGTTT...GCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GCATATTGCAAGCTGGTGCCTTCACAGAAAGTCAGAACCATGGACAAAACCATGGAACTGGTGTCCAGGTaGAATCAGGAGACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: AYCKLVPSQKVRTMDKTMELVSR*NQETSV
Trigger: AACAGAAGTCTCCTGATTCCACCTGGACACCAGTTC...CATGGTTTTGTCCATGGTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GAAGGCAACCACACTGATTATGGAGGCTCCACTTTTTCACTATCCAACTCAAAATCGCTCATTTTGGGCTaGTCCACGTACTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: EGNHTDYGGSTFSLSNSKSLILG*STYSCW
Trigger: CCAGCATGAGTACGTGGACCAGCCCAAAATGAGCGA...TTTTGAGTTGGATAGTGAAAAAGTGGAGCCTCCATAATCAGTGTGGTTGCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTGTATGGCACTTGTTTaGCTCTCACACAAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SLATSREVVDKMFQFLFTCMALV*LSHKWE
Trigger: TTCCCACTTGTGTGAGAGCCAAACAAGTGCCATACA...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
3UTR CAA 72 bp TGCTGTCTCACATGCAAGGTGAAATGGGATGGCATATaGCAAGCTGGTGCCTTCACAGAAAGTCAGAACCAT +
Preference number: 4 (lower is better)
Translates to: CCLTCKVKWDGI*QAGAFTESQNH
Trigger: ATGGTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGCCATCCCATTTCACCTTGCATGTGAGACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp GCATATTGCAAGCTGGTGCCTTCACAGAAAGTCAGAACCATGGACAAAACCATGTTCTTTCAACCATTTTaGATCGTGCTTGACGGTCCG +
Preference number: 4 (lower is better)
Translates to: AYCKLVPSQKVRTMDKTMFFQPF*IVLDGP
Trigger: CGGACCGTCAAGCACGATTCAAAATGGTTGAAAGAA...CATGGTTTTGTCCATGGTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCAATGTATTTGTGTTTTaGAGGTTGGAACGCAAACCC +
Preference number: 4 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFNVFVF*RLERKP
Trigger: GGGTTTGCGTTCCAACCTGCAAAACACAAATACATT...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp AACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATAGAGTATGCACGTGTGTGCTGTaGACATGGCTTGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: NTAHGLQYVDSSFVHDRVCTCVL*TWLGDS
Trigger: GGAGTCTCCAAGCCATGTGCACAGCACACACGTGCA...TACTCTATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp AACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATAGAGTAGTCAATGATGGGTGCTaGACTGCCAGTACTCTCGGG +
Preference number: 4 (lower is better)
Translates to: NTAHGLQYVDSSFVHDRVVNDGC*TASTLG
Trigger: CCCGAGAGTACTGGCAGTGCAGCACCCATCATTGAC...TACTCTATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGAACTGGTGTCCAGGTaGAATCAGGAGACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACELVSR*NQETSV
Trigger: AACAGAAGTCTCCTGATTCCACCTGGACACCAGTTC...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp AACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATAGAGTAGCCTTCTTGGTCTGGTaGGTACTCGAGGCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: NTAHGLQYVDSSFVHDRVAFLVW*VLEAVE
Trigger: CTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGC...TACTCTATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GCTACAGACCAGACAGTCCAAACACAAAGCTCAGAATTCCAGCTCCAACTTATTTTGTGTTTTGCAGGTTaGAACGCAAACCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ATDQTVQTQSSEFQLQLILCFAG*NANPVW
Trigger: CCAGACTGGGTTTGCGTTCCAACCTGCAAAACACAA...AATAAGTTGGAGCTGGAATTCTGAGCTTTGTGTTTGGACTGTCTGGTCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp AACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATAGAGTAGGTGAGTCCCCTTGGTaGTGTCTGCGCCGATTAACA +
Preference number: 4 (lower is better)
Translates to: NTAHGLQYVDSSFVHDRVGESPW*CLRRLT
Trigger: TGTTAATCGGCGCAGACACCACCAAGGGGACTCACC...TACTCTATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGCAACAACACTGCTCATaGTTTACAGTATGTGGACAG +
Preference number: 4 (lower is better)
Translates to: KPSLATSREVVDKMFQFLQQHCS*FTVCGQ
Trigger: CTGTCCACATACTGTAAACCATGAGCAGTGTTGTTG...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
3UTR CAA 72 bp AATCCTTTGCCCCAGTCAACGTTTTTGCAGCATCCATaGTGGTCGGCCTTGTACTTGGAGTTACTCGTTAAT +
Preference number: 4 (lower is better)
Translates to: NPLPQSTFLQHP*WSALYLELLVN
Trigger: ATTAACGAGTAACTCCAAGTACAAGGCCGACCACAATGGATGCTGCAAAAACGTTGACTGGGGCAAAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR TCA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTAGGAGCAGAAATCTATaGCATAGTTGCCCAACATGG +
Preference number: 4 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACRSRNL*HSCPTW
Trigger: CCATGTTGGGCAACTATGTCATAGATTTCTGCTCCT...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR TCA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTCCCTTTTGTGTGCTTaGGCAAATGAAAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVSLLCA*ANENQE
Trigger: CTCTTGGTTTTCATTTGCTCAAGCACACAAAAGGGA...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCCGACTCCATCATAGCTaGATTTTTCAGAGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFRLHHS*IFQSCK
Trigger: TTTACAACTCTGAAAAATGCAGCTATGATGGAGTCG...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR GCA 90 bp AACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATAGAGTACAGCAGGGACCAGCCTaGCTGCATCTATTTCCATGT +
Preference number: 4 (lower is better)
Translates to: NTAHGLQYVDSSFVHDRVQQGPA*LHLFPC
Trigger: ACATGGAAATAGATGCAGGCAGGCTGGTCCCTGCTG...TACTCTATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTATGATCATAATCATCTaGATGTCCAGCCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACMIIII*MSSLCL
Trigger: GAGGCACAGGCTGGACATCCAGATGATTATGATCAT...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp AACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATAGAGTAGATGGCCTCCGGCTTTaGGTCTTTGGATTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: NTAHGLQYVDSSFVHDRVDGLRL*VFGLSV
Trigger: GACACTCAATCCAAAGACCCAAAGCCGGAGGCCATC...TACTCTATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp AACAACAACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATACAAGGTTCACCCCATaGTTGGGACTCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NNNTAHGLQYVDSSFVHDTRFTP*LGLLLL
Trigger: CAGCAGCAAGAGTCCCAACCATGGGGTGAACCTTGT...ATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTTGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGCGTCCCGTGAAGTTGTaGACAAAATGTTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVRPVKL*TKCFSF
Trigger: GAAACTGAAACATTTTGTCCACAACTTCACGGGACG...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR TCA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTGTTTGTGATGATAACTaGAGTCTTTTGTGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCVCDDN*SLLWVR
Trigger: TCGGACCCACAAAAGACTTCAGTTATCATCACAAAC...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR GCA 90 bp GTACACAACTCAAGGTGTAAGGCACAAATTTACATGTGGAAAACAGGCTATTCAAATCTGATGTGGTTGTaGTGGGCAAGAGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: VHNSRCKAQIYMWKTGYSNLMWL*WARGNW
Trigger: CCAGTTCCCTCTTGCCCAGCACAACCACATCAGATT...TGAATAGCCTGTTTTCCACATGTAAATTTGTGCCTTACACCTTGAGTTGTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTCATATTGCAAGCTGGTaGCTTCACAGAAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCHIASW*LHRKSE
Trigger: TTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATG...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCCAAATCATTAATTTATaGAAGGTAGCAGCCAGCATA +
Preference number: 4 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFQIINL*KVAASI
Trigger: TATGCTGGCTGCTACCTTGCATAAATTAATGATTTG...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTTGCATGTATAATTGGTaGCTTTGGTGGAAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCCMYNW*LWWKVG
Trigger: CCCTACTTTCCACCAAAGGCACCAATTATACATGCA...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR GCA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTCAAGGGCAACTACTGTaGATGTATAATTGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCQGQLL*MYNWCL
Trigger: AAGGCACCAATTATACATGCACAGTAGTTGCCCTTG...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CCA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTCAAACAGTGCAACGTTaGCATGTTTGGCATCATATG +
Preference number: 4 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCQTVQR*HVWHHM
Trigger: CATATGATGCCAAACATGCCAACGTTGCACTGTTTG...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGGAAGTCAGTCACTGTaGCTGAGTATAGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACGSQSL*LSIVFH
Trigger: ATGGAAAACTATACTCAGCCACAGTGACTGACTTCC...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CCA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGCTGTGCATGTATAATTaGTGCCTTTGGTGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVLCMYN*CLWWKV
Trigger: TACTTTCCACCAAAGGCACCAATTATACATGCACAG...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR GCA 90 bp GAAGGCAACCACACTGATTATGGAGGCTCCACTTTTTCACTATCCAACTCAAAATCATTCCTACATGTGTaGTTGTCTCTTTGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: EGNHTDYGGSTFSLSNSKSFLHV*LSLWGK
Trigger: TTTCCCCCAAAGAGACAAGCACACATGTAGGAATGA...TTTTGAGTTGGATAGTGAAAAAGTGGAGCCTCCATAATCAGTGTGGTTGCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR GCA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTACCACACTTAAATGCTaGCACAAAGCTTTGGTAACA +
Preference number: 4 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACTTLKC*HKALVT
Trigger: TGTTACCAAAGCTTTGTGGCAGCATTTAAGTGTGGT...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR TCA 90 bp AACAACAACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATTTCTCCAGGACTCTTTaGGATCCTCCCATATCATTC +
Preference number: 4 (lower is better)
Translates to: NNNTAHGLQYVDSSFVHDFSRTL*DPPISF
Trigger: GAATGATATGGGAGGATCTCAAAGAGTCCTGGAGAA...ATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTTGTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTATTATTTCAATAGATaGTTTCCGTTTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVYYFNR*FPFLRL
Trigger: CAGCCTCAGAAACGGAAACCATCTATTGAAATAATA...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR TCA 90 bp GTACACAACTCAAGGTGTAAGGCACAAATTTACATGTGGAAAACAGGCTATTCATTTCAATGGGCTTTCTaGAGAGCTGTTCATAGGATG +
Preference number: 4 (lower is better)
Translates to: VHNSRCKAQIYMWKTGYSFQWAF*RAVHRM
Trigger: CATCCTATGAACAGCTCTTCAGAAAGCCCATTGAAA...TGAATAGCCTGTTTTCCACATGTAAATTTGTGCCTTACACCTTGAGTTGTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp GAAGGCAACCACACTGATTATGGAGGCTCCACTTTTTCACTATCCAACTCAAAAGTAGGTATGTGCTTTTaGCTCATGTTTGTGATGATA +
Preference number: 4 (lower is better)
Translates to: EGNHTDYGGSTFSLSNSKVGMCF*LMFVMI
Trigger: TATCATCACAAACATGAGCCAAAAGCACATACCTAC...TTTTGAGTTGGATAGTGAAAAAGTGGAGCCTCCATAATCAGTGTGGTTGCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CCA 90 bp AACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATAGAGTACGTCCCGTGAAGTTGTaGACAAAATGTTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: NTAHGLQYVDSSFVHDRVRPVKL*TKCFSF
Trigger: GAAACTGAAACATTTTGTCCACAACTTCACGGGACG...TACTCTATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS GCA 90 bp GCTAAGCGGGCATCGCGGGCGACCGGCACCGCGGAGGAGCGCCGCTaGTGGGTTCCGAGCGCCTGGGCAGCCGAGTGCGCGGGGAGCGGA +
Preference number: 5 (lower is better)
Translates to: AKRASRATGTAEERR*WVPSAWAAECAGSG
Trigger: TCCGCTCCCCGCGCACTCGGCTGCCCAGGCGCTCGGAACCCAGCAGCGGCGCTCCTCCGCGGTGCCGGTCGCCCGCGATGCCCGCTTAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS GCA 90 bp CTGCGGCCGGCAGCGCGGTGCCGCGGGTGTGGTGATGCTGGCCGCTaGTACACGCTGCTAAGCGGGCATCGCGGGCGACCGGCACCGCGG +
Preference number: 5 (lower is better)
Translates to: LRPAARCRGCGDAGR*YTLLSGHRGRPAPR
Trigger: CCGCGGTGCCGGTCGCCCGCGATGCCCGCTTAGCAGCGTGTAGCAGCGGCCAGCATCACCACACCCGCGGCACCGCGCTGCCGGCCGCAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS CCA 90 bp GCGACCGGCACCGCGGAGGAGCGCCGCTGCTGGGTTCCGAGCGCCTaGGCAGCCGAGTGCGCGGGGAGCGGAGTTGGCTGCAGCCTCACC +
Preference number: 5 (lower is better)
Translates to: ATGTAEERRCWVPSA*AAECAGSGVGCSLT
Trigger: GGTGAGGCTGCAGCCAACTCCGCTCCCCGCGCACTCGGCTGCCCAGGCGCTCGGAACCCAGCAGCGGCGCTCCTCCGCGGTGCCGGTCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS CCA 90 bp AAGCGGGCATCGCGGGCGACCGGCACCGCGGAGGAGCGCCGCTGCTaGGTTCCGAGCGCCTGGGCAGCCGAGTGCGCGGGGAGCGGAGTT +
Preference number: 5 (lower is better)
Translates to: KRASRATGTAEERRC*VPSAWAAECAGSGV
Trigger: AACTCCGCTCCCCGCGCACTCGGCTGCCCAGGCGCTCGGAACCCAGCAGCGGCGCTCCTCCGCGGTGCCGGTCGCCCGCGATGCCCGCTT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS TCA 90 bp CTCTGGCCCGGCTCTGCGGCCGGCAGCGCGGTGCCGCGGGTGTGGTaGTGCTGGCCGCTGCTACACGCTGCTAAGCGGGCATCGCGGGCG +
Preference number: 5 (lower is better)
Translates to: LWPGSAAGSAVPRVW*CWPLLHAAKRASRA
Trigger: CGCCCGCGATGCCCGCTTAGCAGCGTGTAGCAGCGGCCAGCATCACCACACCCGCGGCACCGCGCTGCCGGCCGCAGAGCCGGGCCAGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS GCA 90 bp GCGGAGGAGCGCCGCTGCTGGGTTCCGAGCGCCTGGGCAGCCGAGTaGGCGGGGAGCGGAGTTGGCTGCAGCCTCACCCCGTGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: AEERRCWVPSAWAAE*AGSGVGCSLTPCRS
Trigger: TGAGCGGCACGGGGTGAGGCTGCAGCCAACTCCGCTCCCCGCGCACTCGGCTGCCCAGGCGCTCGGAACCCAGCAGCGGCGCTCCTCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS GCA 90 bp GCAGGGGTGCAAGGCTCTGGCCCGGCTCTGCGGCCGGCAGCGCGGTaGCGCGGGTGTGGTGATGCTGGCCGCTGCTACACGCTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: AGVQGSGPALRPAAR*RGCGDAGRCYTLLS
Trigger: GCTTAGCAGCGTGTAGCAGCGGCCAGCATCACCACACCCGCGGCACCGCGCTGCCGGCCGCAGAGCCGGGCCAGAGCCTTGCACCCCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS GCA 90 bp GGCTGCCTCGAGACAGTCACGGCCTGGCCAGATGGCTGGGAGCTGTaGACCTGGATGGAGTCCACCCTCTGCGGGGCGGGCGGCGGGTTG +
Preference number: 5 (lower is better)
Translates to: GCLETVTAWPDGWEL*TWMESTLCGAGGGL
Trigger: CAACCCGCCGCCCGCCCCGCAGAGGGTGGACTCCATCCAGGTGCACAGCTCCCAGCCATCTGGCCAGGCCGTGACTGTCTCGAGGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CCA 90 bp AGACAGTCACGGCCTGGCCAGATGGCTGGGAGCTGTGCACCTGGATaGAGTCCACCCTCTGCGGGGCGGGCGGCGGGTTGTCTCCCCTGC +
Preference number: 5 (lower is better)
Translates to: RQSRPGQMAGSCAPG*SPPSAGRAAGCLPC
Trigger: GCAGGGGAGACAACCCGCCGCCCGCCCCGCAGAGGGTGGACTCCATCCAGGTGCACAGCTCCCAGCCATCTGGCCAGGCCGTGACTGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGGGGGCGGGCGGCGGGTaGTCTCCCCTGCCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQGAGGG*SPLPKL
Trigger: GAGCTTTGGCAGGGGAGACAACCCGCCGCCCGCCCC...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGCCGGGAGTGGCGAGCTaGCCGTTGTGCATGAGTGGC +
Preference number: 5 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLPGVAS*PLCMSG
Trigger: GCCACTCATGCACAACGGCAAGCTCGCCACTCCCGG...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGGTGAGCTCCTTCTCCTaGCGCTGCACCACAGCCACG +
Preference number: 5 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLVSSFS*RCTTAT
Trigger: CGTGGCTGTGGTGCAGCGCAAGGAGAAGGAGCTCAC...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCAGCATCTTGGCCGTGTaGCCGGGAGTGGCGAGCTTG +
Preference number: 5 (lower is better)
Translates to: PLCPREEDPASSALPQAFSILAV*PGVASL
Trigger: CAAGCTCGCCACTCCCGGCAACACGGCCAAGATGCT...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCCGGGAGTGGCGAGCTaGCCGTTGTGCATGAGTGGC +
Preference number: 5 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGPGVAS*PLCMSG
Trigger: GCCACTCATGCACAACGGCAAGCTCGCCACTCCCGG...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACCCGGGAGTGGCGAGCTaGCCGTTGTGCATGAGTGGC +
Preference number: 5 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYPGVAS*PLCMSG
Trigger: GCCACTCATGCACAACGGCAAGCTCGCCACTCCCGG...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGCCGGGAGTGGCGAGCTaGCCGTTGTGCATGAGTGGC +
Preference number: 5 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQPGVAS*PLCMSG
Trigger: GCCACTCATGCACAACGGCAAGCTCGCCACTCCCGG...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS CCA 90 bp AGGCCGCTGAGCTTGGTGACGCTGCTCATGGAGCCCCGGCGCGAGTaGGTGAGCTCCTTCTCCTTGCGCTGCACCACAGCCACGTCTTTG +
Preference number: 5 (lower is better)
Translates to: RPLSLVTLLMEPRRE*VSSFSLRCTTATSL
Trigger: CAAAGACGTGGCTGTGGTGCAGCGCAAGGAGAAGGAGCTCACCCACTCGCGCCGGGGCTCCATGAGCAGCGTCACCAAGCTCAGCGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGTGAGCTCCTTCTCCTaGCGCTGCACCACAGCCACG +
Preference number: 5 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAAVSSFS*RCTTAT
Trigger: CGTGGCTGTGGTGCAGCGCAAGGAGAAGGAGCTCAC...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGTGAGCTCCTTCTCCTaGCGCTGCACCACAGCCACG +
Preference number: 5 (lower is better)
Translates to: EDPASSALPQAFLVWWVLVSSFS*RCTTAT
Trigger: CGTGGCTGTGGTGCAGCGCAAGGAGAAGGAGCTCAC...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGTGGCGAGCTTGCCGTaGTGCATGAGTGGCGTGAGG +
Preference number: 5 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAAVASLP*CMSGVR
Trigger: CCTCACGCCACTCATGCACAACGGCAAGCTCGCCAC...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGTGGCGAGCTTGCCGTaGTGCATGAGTGGCGTGAGG +
Preference number: 5 (lower is better)
Translates to: PERRTQRPRLCRRPSWSGVASLP*CMSGVR
Trigger: CCTCACGCCACTCATGCACAACGGCAAGCTCGCCAC...ACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGTGGCGAGCTTGCCGTaGTGCATGAGTGGCGTGAGG +
Preference number: 5 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVVASLP*CMSGVR
Trigger: CCTCACGCCACTCATGCACAACGGCAAGCTCGCCAC...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGAGCATCTTGGCCGTGTaGCCGGGAGTGGCGAGCTTG +
Preference number: 5 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQSILAV*PGVASL
Trigger: CAAGCTCGCCACTCCCGGCAACACGGCCAAGATGCT...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGCTTCTGCTGCAGCGTaGGGGTTGACTCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLASAAA*GLTLGW
Trigger: CCACCCCAGAGTCAACCCCAACGCTGCAGCAGAAGC...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTGCTTCTGCTGCAGCGTaGGGGTTGACTCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGASAAA*GLTLGW
Trigger: CCACCCCAGAGTCAACCCCAACGCTGCAGCAGAAGC...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGGCCACCTCGCTCATTTaGGGCTGGTCCACGTACTCA +
Preference number: 5 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLATSLI*GWSTYS
Trigger: TGAGTACGTGGACCAGCCCAAAATGAGCGAGGTGGC...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGCGGGCACCTCGCCTaGCCTGCTGGTTCGACACCT +
Preference number: 5 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLSGHLA*PAGSTP
Trigger: AGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCT...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTCTGCCGCAGGCCTTCTaGGTCTGGTGGGTACTCGAG +
Preference number: 5 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSLPQAF*VWWVLE
Trigger: CTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAG...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGGCGCGGGGAGCGGAGTaGGCTGCAGCCTCACCCCGT +
Preference number: 5 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLARGAE*AAASPR
Trigger: ACGGGGTGAGGCTGCAGCCAACTCCGCTCCCCGCGC...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGAGAAGGCAGTGTGAATaGGAGGGTGTGGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLRRQCE*EGVVLP
Trigger: GGGCAGCACCACACCCTCCAATTCACACTGCCTTCT...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGTGTGTGCTTGTCTCTTaGGGGGAAATAGTCGCGGCG +
Preference number: 5 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLCVLVS*GEIVAA
Trigger: CGCCGCGACTATTTCCCCCAAAGAGACAAGCACACA...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAAGAGGCCGCTGAGCTaGGTGACGCTGCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSKRPLS*VTLLME
Trigger: CTCCATGAGCAGCGTCACCAAGCTCAGCGGCCTCTT...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCGGATGGCCTCCGGCTTaGGGTCTTTGGATTGAGTGT +
Preference number: 5 (lower is better)
Translates to: PLCPREEDPASSALPQAFGWPPA*GLWIEC
Trigger: ACACTCAATCCAAAGACCCAAAGCCGGAGGCCATCC...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTAGCATCTTGGCCGTGTaGCCGGGAGTGGCGAGCTTG +
Preference number: 5 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVSILAV*PGVASL
Trigger: CAAGCTCGCCACTCCCGGCAACACGGCCAAGATGCT...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCGCTTTAATGAGCATCTaGGCCGTGTTGCCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: PLCPREEDPASSALPQAFALMSI*AVLPGV
Trigger: CACTCCCGGCAACACGGCCAAGATGCTCATTAAAGC...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGGGGGCGGGCGGCGGGTaGTCTCCCCTGCCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: QAFLVWWVLEAVENLAELGAGGG*SPLPKL
Trigger: GAGCTTTGGCAGGGGAGACAACCCGCCGCCCGCCCC...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTAGACCCACATTCCCTTaGCGCAGAGGCCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PERRTQRPRLCRRPSWSGRPTFP*RRGLEV
Trigger: CACCTCCAGGCCTCTGCGCAAAGGGAATGTGGGTCT...ACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS TCA 90 bp AGGGCGTACGCTTCAGCCCCGACCTTGTCAGTGAGTTGTAGGCGTTaGGGCTGGGCTGCCTCGAGACAGTCACGGCCTGGCCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: RAYASAPTLSVSCRR*GWAASRQSRPGQMA
Trigger: AGCCATCTGGCCAGGCCGTGACTGTCTCGAGGCAGCCCAGCCTCAACGCCTACAACTCACTGACAAGGTCGGGGCTGAAGCGTACGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAAGAGGCCGCTGAGCTaGGTGACGCTGCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLKRPLS*VTLLME
Trigger: CTCCATGAGCAGCGTCACCAAGCTCAGCGGCCTCTT...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCCTTTGGGTCTTTGGATaGAGTGTCCCCAAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: PLCPREEDPASSALPQAFLWVFG*SVPKEA
Trigger: GGCCTCTTTGGGGACACTCAATCCAAAGACCCAAAG...GAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCAGCATCTTGGCCGTGTaGCCGGGAGTGGCGAGCTTG +
Preference number: 5 (lower is better)
Translates to: WWVLEAVENLAELSGHLASILAV*PGVASL
Trigger: CAAGCTCGCCACTCCCGGCAACACGGCCAAGATGCT...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGCCACCTCGCTCATTTaGGGCTGGTCCACGTACTCA +
Preference number: 5 (lower is better)
Translates to: PERRTQRPRLCRRPSWSGATSLI*GWSTYS
Trigger: TGAGTACGTGGACCAGCCCAAAATGAGCGAGGTGGC...ACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGCCACCTCGCTCATTTaGGGCTGGTCCACGTACTCA +
Preference number: 5 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLATSLI*GWSTYS
Trigger: TGAGTACGTGGACCAGCCCAAAATGAGCGAGGTGGC...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGGCTTCAGCCCCGACCTaGTCAGTGAGTTGTAGGCGT +
Preference number: 5 (lower is better)
Translates to: QRPRLCRRPSWSGGYSRQASAPT*SVSCRR
Trigger: ACGCCTACAACTCACTGACAAGGTCGGGGCTGAAGC...CTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGTGAGTCCCCGCCGTaGCAAACCTTCACCAAACCA +
Preference number: 5 (lower is better)
Translates to: PERRTQRPRLCRRPSWSGGESPP*QTFTKP
Trigger: TGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACC...ACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGGTGAGTCCCCGCCGTaGCAAACCTTCACCAAACCA +
Preference number: 5 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLGESPP*QTFTKP
Trigger: TGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACC...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGCCCCAGTCAACGTTTTaGCAGCATCCATTGTGGTCG +
Preference number: 5 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLPQSTF*QHPLWS
Trigger: CGACCACAATGGATGCTGCAAAAACGTTGACTGGGG...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCATTTTGAATCGTGCTaGACGGTCCGCAGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGHFESC*TVRRVG
Trigger: CCCTACCCTGCGGACCGTCAAGCACGATTCAAAATG...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGCATACAGAGAGCTGCTaGCTCTGTCCAGCTGCATGC +
Preference number: 5 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSHTESC*LCPAAC
Trigger: GCATGCAGCTGGACAGAGCAAGCAGCTCTCTGTATG...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CAA 90 bp CCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCGTGAGCTCCTTCTCCTaGCGCTGCACCACAGCCACG +
Preference number: 5 (lower is better)
Translates to: PAVANLHQTTRPSFREYPVSSFS*RCTTAT
Trigger: CGTGGCTGTGGTGCAGCGCAAGGAGAAGGAGCTCAC...GGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACGGATGGCCTCCGGCTTaGGGTCTTTGGATTGAGTGT +
Preference number: 5 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYGWPPA*GLWIEC
Trigger: ACACTCAATCCAAAGACCCAAAGCCGGAGGCCATCC...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTCCGGGAGTGGCGAGCTaGCCGTTGTGCATGAGTGGC +
Preference number: 5 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLPGVAS*PLCMSG
Trigger: GCCACTCATGCACAACGGCAAGCTCGCCACTCCCGG...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGCTTTAATGAGCATCTaGGCCGTGTTGCCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVALMSI*AVLPGV
Trigger: CACTCCCGGCAACACGGCCAAGATGCTCATTAAAGC...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGTCCTTTGTGCAGGCATaGATGAGGTTCTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLSFVQA*MRFWFL
Trigger: GAGGAACCAGAACCTCATCAATGCCTGCACAAAGGA...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTAGCGGGCACCTCGCCTaGCCTGCTGGTTCGACACCT +
Preference number: 5 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLSGHLA*PAGSTP
Trigger: AGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCT...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAAGCGGGCACCTCGCCTaGCCTGCTGGTTCGACACCT +
Preference number: 5 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPSGHLA*PAGSTP
Trigger: AGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCT...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGCCATTGTGGTCGGCCTaGTACTTGGAGTTACTCGTT +
Preference number: 5 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLPLWSA*YLELLV
Trigger: AACGAGTAACTCCAAGTACAAGGCCGACCACAATGG...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS GCA 90 bp GGTGATGCCCGAGAAGACGGCCCCCATGACGAAAGCCAGGATGACTaGAATGGCCAAGAGGGTGACGGGAACCAGCTGGTCGTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: GDAREDGPHDESQDD*NGQEGDGNQLVVAF
Trigger: AAAGGCCACGACCAGCTGGTTCCCGTCACCCTCTTGGCCATTGCAGTCATCCTGGCTTTCGTCATGGGGGCCGTCTTCTCGGGCATCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000506114.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS GCA 90 bp TATAGTCAACCCCGTAGGAAGAGGAGTGGTGCATTTCCAGCCGCTTaGTTAGACCGGTCTGAGACAGGGAGGCTCCCGGGGGACCCAGGG +
Preference number: 5 (lower is better)
Translates to: YSQPRRKRSGAFPAA*LDRSETGRLPGDPG
Trigger: CCCTGGGTCCCCCGGGAGCCTCCCTGTCTCAGACCGGTCTAAGCAAGCGGCTGGAAATGCACCACTCCTCTTCCTACGGGGTTGACTATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CCA 90 bp CTTGGCCGTGTTGCCGGGAGTGGCGAGCTTGCCGTTGTGCATGAGTaGCGTGAGGATGGCCTCCGGCTTTGGGTCTTTGGATTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: LGRVAGSGELAVVHE*REDGLRLWVFGLSV
Trigger: GACACTCAATCCAAAGACCCAAAGCCGGAGGCCATCCTCACGCCACTCATGCACAACGGCAAGCTCGCCACTCCCGGCAACACGGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTTCGAATCTGATGTGGTaGTGCTGGGCAAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSSNLMW*CWARGN
Trigger: GTTCCCTCTTGCCCAGCACAACCACATCAGATTCGA...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR CAA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGTCGAATCTGATGTGGTaGTGCTGGGCAAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLSNLMW*CWARGN
Trigger: GTTCCCTCTTGCCCAGCACAACCACATCAGATTCGA...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR CAA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGCTTTGGGTCTTTGGATaGAGTGTCCCCAAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSLWVFG*SVPKEA
Trigger: GGCCTCTTTGGGGACACTCAATCCAAAGACCCAAAG...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGGTGGCGAGCTTGCCGTaGTGCATGAGTGGCGTGAGG +
Preference number: 5 (lower is better)
Translates to: LHQTTRPSFREYPCVPERVASLP*CMSGVR
Trigger: CCTCACGCCACTCATGCACAACGGCAAGCTCGCCAC...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGGTGGCGAGCTTGCCGTaGTGCATGAGTGGCGTGAGG +
Preference number: 5 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEVASLP*CMSGVR
Trigger: CCTCACGCCACTCATGCACAACGGCAAGCTCGCCAC...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGAGCATCTTGGCCGTGTaGCCGGGAGTGGCGAGCTTG +
Preference number: 5 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLSILAV*PGVASL
Trigger: CAAGCTCGCCACTCCCGGCAACACGGCCAAGATGCT...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGGCTTTAATGAGCATCTaGGCCGTGTTGCCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLALMSI*AVLPGV
Trigger: CACTCCCGGCAACACGGCCAAGATGCTCATTAAAGC...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGGCTTCTGCTGCAGCGTaGGGGTTGACTCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLASAAA*GLTLGW
Trigger: CCACCCCAGAGTCAACCCCAACGCTGCAGCAGAAGC...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGCTTCTGCTGCAGCGTaGGGGTTGACTCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPASAAA*GLTLGW
Trigger: CCACCCCAGAGTCAACCCCAACGCTGCAGCAGAAGC...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AGGCAGTGTGAATTGGAGGGTGTGGTGCTGCCCAGCGTTCTCAGGCTGTCGCATCTGCCGCAGGCCTTCTaGGTCTGGTGGGTACTCGAG +
Preference number: 5 (lower is better)
Translates to: RQCELEGVVLPSVLRLSHLPQAF*VWWVLE
Trigger: CTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAG...ATGCGACAGCCTGAGAACGCTGGGCAGCACCACACCCTCCAATTCACACTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTCTGCCGCAGGCCTTCTaGGTCTGGTGGGTACTCGAG +
Preference number: 5 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLLPQAF*VWWVLE
Trigger: CTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAG...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCACTGCCGCAGGCCTTCTaGGTCTGGTGGGTACTCGAG +
Preference number: 5 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPLPQAF*VWWVLE
Trigger: CTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAG...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGTCACAGCCGAGACCTaGAAGCTTTCTCATGGGGGT +
Preference number: 5 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVVTAET*KLSHGG
Trigger: ACCCCCATGAGAAAGCTTCAAGGTCTCGGCTGTGAC...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503865.1
CDS GCA 90 bp ATGAGCATCTTGGCCGTGTTGCCGGGAGTGGCGAGCTTGCCGTTGTaGATGAGTGGCGTGAGGATGGCCTCCGGCTTTGGGTCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: MSILAVLPGVASLPL*MSGVRMASGFGSLD
Trigger: ATCCAAAGACCCAAAGCCGGAGGCCATCCTCACGCCACTCATGCACAACGGCAAGCTCGCCACTCCCGGCAACACGGCCAAGATGCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CCA 90 bp ATGGTCTTATACTCCAGTGTGGCGGCCTGGTCCTCCAGCGCCATCTaGGCCACCTCGCTCATTTTGGGCTGGTCCACGTACTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: MVLYSSVAAWSSSAI*ATSLILGWSTYSCW
Trigger: CCAGCATGAGTACGTGGACCAGCCCAAAATGAGCGAGGTGGCCCAGATGGCGCTGGAGGACCAGGCCGCCACACTGGAGTATAAGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCCATTTTGAATCGTGCTaGACGGTCCGCAGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: WWVLEAVENLAELSGHLAHFESC*TVRRVG
Trigger: CCCTACCCTGCGGACCGTCAAGCACGATTCAAAATG...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp CTGAGCGGGCACCTCGCCTTGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGACAACATCACGCCCGTaGATACGAATCACATCTGTA +
Preference number: 5 (lower is better)
Translates to: LSGHLALPAGSTPDPLPLTTSRP*IRITSV
Trigger: TACAGATGTGATTCGTATCAACGGGCGTGATGTTGT...CAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGTGTCCACTGCAATTTaGGTAAGGCGGTATCTGACC +
Preference number: 5 (lower is better)
Translates to: EDPASSALPQAFLVWWVLVSTAI*VRRYLT
Trigger: GGTCAGATACCGCCTTACCAAAATTGCAGTGGACAC...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCCCCAGACCATCTGTATaGCCACGCTCTATGTCCTGC +
Preference number: 5 (lower is better)
Translates to: WWVLEAVENLAELSGHLAPRPSV*PRSMSC
Trigger: GCAGGACATAGAGCGTGGCAATACAGATGGTCTGGG...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CAA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGAAGAGGCCGCTGAGCTaGGTGACGCTGCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: LHQTTRPSFREYPCVPERKRPLS*VTLLME
Trigger: CTCCATGAGCAGCGTCACCAAGCTCAGCGGCCTCTT...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTCTTTGGGTCTTTGGATaGAGTGTCCCCAAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVLWVFG*SVPKEA
Trigger: GGCCTCTTTGGGGACACTCAATCCAAAGACCCAAAG...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCGGATGGCCTCCGGCTTaGGGTCTTTGGATTGAGTGT +
Preference number: 5 (lower is better)
Translates to: WWVLEAVENLAELSGHLAGWPPA*GLWIEC
Trigger: ACACTCAATCCAAAGACCCAAAGCCGGAGGCCATCC...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGTCCTTTGTGCAGGCATaGATGAGGTTCTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: REEDPASSALPQAFLVWWSFVQA*MRFWFL
Trigger: GAGGAACCAGAACCTCATCAATGCCTGCACAAAGGA...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGGCCACCTCGCTCATTTaGGGCTGGTCCACGTACTCA +
Preference number: 5 (lower is better)
Translates to: WVLEAVENLAELSGHLALATSLI*GWSTYS
Trigger: TGAGTACGTGGACCAGCCCAAAATGAGCGAGGTGGC...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCAGGTTCACCCCATGGTaGGGACTCTTGCTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: WWVLEAVENLAELSGHLARFTPW*GLLLLR
Trigger: TCTCAGCAGCAAGAGTCCCAACCATGGGGTGAACCT...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCGGGGCGGGCGGCGGGTaGTCTCCCCTGCCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFGAGGG*SPLPKL
Trigger: GAGCTTTGGCAGGGGAGACAACCCGCCGCCCGCCCC...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TCCATGCTTCGCAGCACAGCCAAAGGGTGGTTCCAGTTGGCACAACTAGAAGGCAGCGGGCACCTCGCCTaGCCTGCTGGTTCGACACCT +
Preference number: 5 (lower is better)
Translates to: SMLRSTAKGWFQLAQLEGSGHLA*PAGSTP
Trigger: AGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCT...GCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp GTGAGTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCACTGTATGGCACTTGTTaGGCTCTCACACAAGTGGGA +
Preference number: 5 (lower is better)
Translates to: VSTPVSQRGGPSVLGSAALYGTC*ALTQVG
Trigger: TCCCACTTGTGTGAGAGCCAAACAAGTGCCATACAG...TGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS TCA 90 bp TGCATGAGTGGCGTGAGGATGGCCTCCGGCTTTGGGTCTTTGGATTaGGTGTCCCCAAAGAGGCCGCTGAGCTTGGTGACGCTGCTCATG +
Preference number: 5 (lower is better)
Translates to: CMSGVRMASGFGSLD*VSPKRPLSLVTLLM
Trigger: CATGAGCAGCGTCACCAAGCTCAGCGGCCTCTTTGGGGACACTCAATCCAAAGACCCAAAGCCGGAGGCCATCCTCACGCCACTCATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CCA 90 bp GAGCTTGCCGTTGTGCATGAGTGGCGTGAGGATGGCCTCCGGCTTTaGGTCTTTGGATTGAGTGTCCCCAAAGAGGCCGCTGAGCTTGGT +
Preference number: 5 (lower is better)
Translates to: ELAVVHEWREDGLRL*VFGLSVPKEAAELG
Trigger: ACCAAGCTCAGCGGCCTCTTTGGGGACACTCAATCCAAAGACCCAAAGCCGGAGGCCATCCTCACGCCACTCATGCACAACGGCAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CCA 90 bp CTGCTGAGATGTTCCTTGATGGTCTTATACTCCAGTGTGGCGGCCTaGTCCTCCAGCGCCATCTGGGCCACCTCGCTCATTTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LLRCSLMVLYSSVAA*SSSAIWATSLILGW
Trigger: CCAGCCCAAAATGAGCGAGGTGGCCCAGATGGCGCTGGAGGACCAGGCCGCCACACTGGAGTATAAGACCATCAAGGAACATCTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTCTCCTTCGCAAGCCTTaGTCATTCCTACATGTGTGC +
Preference number: 5 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVLLRKP*SFLHVC
Trigger: GCACACATGTAGGAATGACAAAGGCTTGCGAAGGAG...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp CCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTTTTCTGCAGGAAGGGTaGAAGGCATTAGTTCCACAG +
Preference number: 5 (lower is better)
Translates to: PERRTQRPRLCRRPSWSGFLQEG*KALVPQ
Trigger: CTGTGGAACTAATGCCTTCAACCCTTCCTGCAGAAA...ACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGCAACGTTGGCATGTTaGGCATCATATGGGCATCTG +
Preference number: 5 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVATLAC*ASYGHL
Trigger: CAGATGCCCATATGATGCCAAACATGCCAACGTTGC...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGAAACCTGAGCCACTCTaGGGAAAACTACCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVKPEPL*GKLPFP
Trigger: TGGGAAAGGTAGTTTTCCCAAGAGTGGCTCAGGTTT...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTCATCAGGGAACTCATaGGAGGTTGCATATCTTTCT +
Preference number: 5 (lower is better)
Translates to: VPLCPREEDPASSALPQASSGNS*EVAYLS
Trigger: AGAAAGATATGCAACCTCCAATGAGTTCCCTGATGA...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp GCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTATGAGCGGGTGCGTCTaGATGAAGTTCAGGGTATCA +
Preference number: 5 (lower is better)
Translates to: ASSALPQAFLVWWVLEAVMSGCV*MKFRVS
Trigger: TGATACCCTGAACTTCATCAAGACGCACCCGCTCAT...AACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCAGGAACCATGGCCTGTaGAAGATGGAGGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTRNHGL*KMEGTA
Trigger: GGCAGTGCCCTCCATCTTCAACAGGCCATGGTTCCT...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTCGAATCTGATGTGGTaGTGCTGGGCAAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: WWVLEAVENLAELSGHLASNLMW*CWARGN
Trigger: GTTCCCTCTTGCCCAGCACAACCACATCAGATTCGA...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR CAA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGAAGAGGCCGCTGAGCTaGGTGACGCTGCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: FLVWWVLEAVENLAELSGKRPLS*VTLLME
Trigger: CTCCATGAGCAGCGTCACCAAGCTCAGCGGCCTCTT...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGAGGTTCACCCCATGGTaGGGACTCTTGCTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: WVLEAVENLAELSGHLALRFTPW*GLLLLR
Trigger: TCTCAGCAGCAAGAGTCCCAACCATGGGGTGAACCT...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTTTAGTGTTGTTTCTTTaGAGAGTGGTGGCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGLVLFL*RVVAWW
Trigger: CCACCAGGCCACCACTCTCAAAAGAAACAACACTAA...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGTTAGTGTTGTTTCTTTaGAGAGTGGTGGCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: REEDPASSALPQAFLVWWLVLFL*RVVAWW
Trigger: CCACCAGGCCACCACTCTCAAAAGAAACAACACTAA...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCGGGGCGGGCGGCGGGTaGTCTCCCCTGCCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCGAGGG*SPLPKL
Trigger: GAGCTTTGGCAGGGGAGACAACCCGCCGCCCGCCCC...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGGCTTCAGCCCCGACCTaGTCAGTGAGTTGTAGGCGT +
Preference number: 5 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLASAPT*SVSCRR
Trigger: ACGCCTACAACTCACTGACAAGGTCGGGGCTGAAGC...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGGTGAGTCCCCGCCGTaGCAAACCTTCACCAAACCA +
Preference number: 5 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFGESPP*QTFTKP
Trigger: TGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACC...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGGGTGAGTCCCCGCCGTaGCAAACCTTCACCAAACCA +
Preference number: 5 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLGESPP*QTFTKP
Trigger: TGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACC...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCCCACGTCCCGTGAAGTaGTGGACAAAATGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: EDPASSALPQAFLVWWVLPRPVK*WTKCFS
Trigger: ACTGAAACATTTTGTCCACAACTTCACGGGACGTGG...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGTTTGTGTTTTGCAGGTaGGAACGCAAACCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSFVFCR*ERKPSL
Trigger: CAGACTGGGTTTGCGTTCCAACCTGCAAAACACAAA...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GTACCCCTGTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCGGCATTTCACAGTATTaGCGCATAGTAAACTTCTGC +
Preference number: 5 (lower is better)
Translates to: VPLCPREEDPASSALPQAGISQY*RIVNFC
Trigger: GCAGAAGTTTACTATGCGCAAATACTGTGAAATGCC...GGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACACAGGGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp GTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTTTTTTGCAGCATCCATaGTGGTCGGCCTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: VPERRTQRPRLCRRPSWSFLQHP*WSALYL
Trigger: CAAGTACAAGGCCGACCACAATGGATGCTGCAAAAA...AGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCACCAGAAGTGATGGGTaGTGGGGGTGTAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: WWVLEAVENLAELSGHLATRSDG*WGCRNV
Trigger: CACATTCCTACACCCCCACAACCCATCACTTCTGGT...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGCAAACAGTGCAACGTaGGCATGTTTGGCATCATAT +
Preference number: 5 (lower is better)
Translates to: REEDPASSALPQAFLVWWANSAT*ACLASY
Trigger: ATATGATGCCAAACATGCCAACGTTGCACTGTTTGC...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGCATACAGAGAGCTGCTaGCTCTGTCCAGCTGCATGC +
Preference number: 5 (lower is better)
Translates to: LHQTTRPSFREYPCVPERHTESC*LCPAAC
Trigger: GCATGCAGCTGGACAGAGCAAGCAGCTCTCTGTATG...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CAA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGCATACAGAGAGCTGCTaGCTCTGTCCAGCTGCATGC +
Preference number: 5 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLHTESC*LCPAAC
Trigger: GCATGCAGCTGGACAGAGCAAGCAGCTCTCTGTATG...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CAA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCACCCAGACCATCTGTATaGCCACGCTCTATGTCCTGC +
Preference number: 5 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPPRPSV*PRSMSC
Trigger: GCAGGACATAGAGCGTGGCAATACAGATGGTCTGGG...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CAA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGGATGGCCTCCGGCTTaGGGTCTTTGGATTGAGTGT +
Preference number: 5 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPGWPPA*GLWIEC
Trigger: ACACTCAATCCAAAGACCCAAAGCCGGAGGCCATCC...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGCTTTAATGAGCATCTaGGCCGTGTTGCCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFALMSI*AVLPGV
Trigger: CACTCCCGGCAACACGGCCAAGATGCTCATTAAAGC...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGCTGCTGAGATGTTCCTaGATGGTCTTATACTCCAGT +
Preference number: 5 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSLLRCS*MVLYSS
Trigger: ACTGGAGTATAAGACCATCAAGGAACATCTCAGCAG...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAAGGTTCACCCCATGGTaGGGACTCTTGCTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPRFTPW*GLLLLR
Trigger: TCTCAGCAGCAAGAGTCCCAACCATGGGGTGAACCT...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGGCTTCAGCCCCGACCTaGTCAGTGAGTTGTAGGCGT +
Preference number: 5 (lower is better)
Translates to: QAFLVWWVLEAVENLAELASAPT*SVSCRR
Trigger: ACGCCTACAACTCACTGACAAGGTCGGGGCTGAAGC...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTTATGTACACGCATCATaGGGCTTCATGGATGTGGAA +
Preference number: 5 (lower is better)
Translates to: PERRTQRPRLCRRPSWSGYVHAS*GFMDVE
Trigger: TTCCACATCCATGAAGCCCAATGATGCGTGTACATA...ACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTATGTACACGCATCATaGGGCTTCATGGATGTGGAA +
Preference number: 5 (lower is better)
Translates to: RRTQRPRLCRRPSWSGGYYVHAS*GFMDVE
Trigger: TTCCACATCCATGAAGCCCAATGATGCGTGTACATA...GTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGTATGTACACGCATCATaGGGCTTCATGGATGTGGAA +
Preference number: 5 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLYVHAS*GFMDVE
Trigger: TTCCACATCCATGAAGCCCAATGATGCGTGTACATA...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGCCAAAAGCTCCAGCCTaGAAGTATGATCACCATGCA +
Preference number: 5 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLPKAPA*KYDHHA
Trigger: TGCATGGTGATCATACTTCAAGGCTGGAGCTTTTGG...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CAA 90 bp TCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGATTGTATCAGGTGCTTaGATCCAAGCTGGCACAATG +
Preference number: 5 (lower is better)
Translates to: SQRGGPSVLGSAAGLLGLIVSGA*IQAGTM
Trigger: CATTGTGCCAGCTTGGATCAAAGCACCTGATACAAT...CAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CCA 90 bp GATCTGTCAGCATGTGCCCAGTGGACATCTCTGCACCCTGTAGCCTaGGGACCTTCCACAGCACACAGGTTCTCTTTTCGGTGCATCGAC +
Preference number: 5 (lower is better)
Translates to: DLSACAQWTSLHPVA*GPSTAHRFSFRCID
Trigger: GTCGATGCACCGAAAAGAGAACCTGTGTGCTGTGGAAGGTCCCCAGGCTACAGGGTGCAGAGATGTCCACTGGGCACATGCTGACAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512156.1
CDS CCA 90 bp GGAAAACATCACCAGAGAGACCCACATTCCCTTTGCGCAGAGGCCTaGAGGTGGGACACCCAAGCTGGCTGTAAGACTGAGAGGAGATGG +
Preference number: 5 (lower is better)
Translates to: GKHHQRDPHSLCAEA*RWDTQAGCKTERRW
Trigger: CCATCTCCTCTCAGTCTTACAGCCAGCTTGGGTGTCCCACCTCCAGGCCTCTGCGCAAAGGGAATGTGGGTCTCTCTGGTGATGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CAA 90 bp GAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCTATCTGGTAGAGGAGTaGAAATGTCATTCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: EDPASSALPQAFLVWWVLYLVEE*KCHSVP
Trigger: TGGCACTGAATGACATTTCAACTCCTCTACCAGATA...GAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257414.12
CDS-3UTR CAA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTAGTGTTGTTTCTTTaGAGAGTGGTGGCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: WWVLEAVENLAELSGHLALVLFL*RVVAWW
Trigger: CCACCAGGCCACCACTCTCAAAAGAAACAACACTAA...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTTTGGAGGAGTTAGTGTaGTTTCTTTTGAGAGTGGTG +
Preference number: 5 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGLEELV*FLLRVV
Trigger: CACCACTCTCAAAAGAAACAACACTAACTCCTCCAA...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGGGTAGGTATGTGCTTTaGGCTCATGTTTGTGATGAT +
Preference number: 5 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSGRYVL*AHVCDD
Trigger: ATCATCACAAACATGAGCCAAAAGCACATACCTACC...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGTAGGTATGTGCTTTaGGCTCATGTTTGTGATGAT +
Preference number: 5 (lower is better)
Translates to: PERRTQRPRLCRRPSWSGGRYVL*AHVCDD
Trigger: ATCATCACAAACATGAGCCAAAAGCACATACCTACC...ACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTTGTGTTTTGCAGGTaGGAACGCAAACCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: WWVLEAVENLAELSGHLAFVFCR*ERKPSL
Trigger: CAGACTGGGTTTGCGTTCCAACCTGCAAAACACAAA...GGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGCACCATTTGTGGATTTaGTTTGCTGTCTCACATGCA +
Preference number: 5 (lower is better)
Translates to: REEDPASSALPQAFLVWWHHLWI*FAVSHA
Trigger: TGCATGTGAGACAGCAAACAAAATCCACAAATGGTG...CCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp CAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGACTTCTACTGAAATGTaGTCTTTGTCACAGCCGAGA +
Preference number: 5 (lower is better)
Translates to: QRGGPSVLGSAAGLLGLVTSTEM*SLSQPR
Trigger: TCTCGGCTGTGACAAAGACAACATTTCAGTAGAAGT...CACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503865.1
CDS-3UTR CAA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTATGAGCGGGTGCGTCTaGATGAAGTTCAGGGTATCA +
Preference number: 5 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLMSGCV*MKFRVS
Trigger: TGATACCCTGAACTTCATCAAGACGCACCCGCTCAT...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGTCCACTGCAATTTaGGTAAGGCGGTATCTGACC +
Preference number: 5 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFVSTAI*VRRYLT
Trigger: GGTCAGATACCGCCTTACCAAAATTGCAGTGGACAC...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCATCCTTTGTGCAGGCATaGATGAGGTTCTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPSFVQA*MRFWFL
Trigger: GAGGAACCAGAACCTCATCAATGCCTGCACAAAGGA...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGTTTCAAGTGGAGTTATaGGCTTACACAGAACAACCT +
Preference number: 5 (lower is better)
Translates to: RTQRPRLCRRPSWSGGYSFQVEL*AYTEQP
Trigger: AGGTTGTTCTGTGTAAGCCAATAACTCCACTTGAAA...CGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS TCA 90 bp CAGCATTCCTCCCCTAGACTCATACCCCTCTTGAGCCGTCGAATCTaGTGTGGTTGTGCTGGGCAAGAGGGAACTGGAATGCCCATACAC +
Preference number: 5 (lower is better)
Translates to: QHSSPRLIPLLSRRI*CGCAGQEGTGMPIH
Trigger: GTGTATGGGCATTCCAGTTCCCTCTTGCCCAGCACAACCACATCAGATTCGACGGCTCAAGAGGGGTATGAGTCTAGGGGAGGAATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257414.12
CDS TCA 90 bp AGATGCTTCCAGTCCAGCATTCCTCCCCTAGACTCATACCCCTCTTaGGCCGTCGAATCTGATGTGGTTGTGCTGGGCAAGAGGGAACTG +
Preference number: 5 (lower is better)
Translates to: RCFQSSIPPLDSYPS*AVESDVVVLGKREL
Trigger: CAGTTCCCTCTTGCCCAGCACAACCACATCAGATTCGACGGCTCAAGAGGGGTATGAGTCTAGGGGAGGAATGCTGGACTGGAAGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000513137.5
CDS TCA 90 bp CAGCATTCCTCCCCTAGACTCATACCCCTCTTGAGCCGTCGAATCTaGTGTGGTTGTGCTGGGCAAGAGGGAACTGGAATGCCCATTCAG +
Preference number: 5 (lower is better)
Translates to: QHSSPRLIPLLSRRI*CGCAGQEGTGMPIQ
Trigger: CTGAATGGGCATTCCAGTTCCCTCTTGCCCAGCACAACCACATCAGATTCGACGGCTCAAGAGGGGTATGAGTCTAGGGGAGGAATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
CDS GCA 90 bp CCATTTAGTAATCCATTATCGAGGGGATCTCTCCGGGCCGCGGGCTaGGCTCTCTCCTTCGCAAGCCTTTGTCATTCCTACATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: PFSNPLSRGSLRAAG*ALSFASLCHSYMCA
Trigger: AGCACACATGTAGGAATGACAAAGGCTTGCGAAGGAGAGAGCGCAGCCCGCGGCCCGGAGAGATCCCCTCGATAATGGATTACTAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCTCCTTCGCAAGCCTTaGTCATTCCTACATGTGTGC +
Preference number: 5 (lower is better)
Translates to: FLVWWVLEAVENLAELSGLLRKP*SFLHVC
Trigger: GCACACATGTAGGAATGACAAAGGCTTGCGAAGGAG...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGAAACCTGAGCCACTCTaGGGAAAACTACCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: LHQTTRPSFREYPCVPERKPEPL*GKLPFP
Trigger: TGGGAAAGGTAGTTTTCCCAAGAGTGGCTCAGGTTT...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp CCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCGGAACTCATTGGAGGTaGCATATCTTTCTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: PAVANLHQTTRPSFREYPGTHWR*HIFLRR
Trigger: CCTCCTTAGAAAGATATGCAACCTCCAATGAGTTCC...GGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp CTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCTGTGTCCCAGAGAGGAAAGTCAGTCTGCTGTaGGGTGATAAATGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LHQTTRPSFREYPCVPERKVSLL*GDKWLQ
Trigger: CTGCAGCCATTTATCACCCAACAGCAGACTGACTTT...CCTCTCTGGGACACAGGGGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CAA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGAAAGTCAGTCTGCTGTaGGGTGATAAATGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLKVSLL*GDKWLQ
Trigger: CTGCAGCCATTTATCACCCAACAGCAGACTGACTTT...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CAA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCAAAGTCAGTCTGCTGTaGGGTGATAAATGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTKVSLL*GDKWLQ
Trigger: CTGCAGCCATTTATCACCCAACAGCAGACTGACTTT...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000515129.5
CDS-3UTR CAA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCACTCCCTTCTTGTCTaGGTGATTATGGGAAGACAC +
Preference number: 5 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEHSLLV*VIMGRH
Trigger: GTGTCTTCCCATAATCACCAAGACAAGAAGGGAGTG...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR CAA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCAAGAGGCCGCTGAGCTaGGTGACGCTGCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFKRPLS*VTLLME
Trigger: CTCCATGAGCAGCGTCACCAAGCTCAGCGGCCTCTT...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGGCCACCTCGCTCATTTaGGGCTGGTCCACGTACTCA +
Preference number: 5 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEEATSLI*GWSTYS
Trigger: TGAGTACGTGGACCAGCCCAAAATGAGCGAGGTGGC...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCCCACGTCCCGTGAAGTaGTGGACAAAATGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTPRPVK*WTKCFS
Trigger: ACTGAAACATTTTGTCCACAACTTCACGGGACGTGG...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCCACGTCCCGTGAAGTaGTGGACAAAATGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEPRPVK*WTKCFS
Trigger: ACTGAAACATTTTGTCCACAACTTCACGGGACGTGG...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGTTTGTGTTTTGCAGGTaGGAACGCAAACCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEFVFCR*ERKPSL
Trigger: CAGACTGGGTTTGCGTTCCAACCTGCAAAACACAAA...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTATTAGTTCACACCATTaGTGGATTTTGTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGISSHH*WILFAV
Trigger: GACAGCAAACAAAATCCACAAATGGTGTGAACTAAT...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGTGGTCGGCCTTGTACTaGGAGTTACTCGTTAATCAC +
Preference number: 5 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLWSALY*ELLVNH
Trigger: GTGATTAACGAGTAACTCCAAGTACAAGGCCGACCA...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp GTGTCCCAGAGAGGAGGACCCAGCGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTGTTTCTGAGGCTGCGTaGACTAAAATGATTCAAATT +
Preference number: 5 (lower is better)
Translates to: VSQRGGPSVLGSAAGLLGVSEAA*TKMIQI
Trigger: AATTTGAATCATTTTAGTCAACGCAGCCTCAGAAAC...ACCAAGAAGGCCTGCGGCAGAGCCGAGGACGCTGGGTCCTCCTCTCTGGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS TCA 90 bp GGCAAGAGGGAACTGGAATGCCCATTCAGTGCCACAAAGGAATTGTaGCAGTCCCCCAGACCATCTGTATTGCCACGCTCTATGTCCTGC +
Preference number: 5 (lower is better)
Translates to: GKRELECPFSATKEL*QSPRPSVLPRSMSC
Trigger: GCAGGACATAGAGCGTGGCAATACAGATGGTCTGGGGGACTGTCACAATTCCTTTGTGGCACTGAATGGGCATTCCAGTTCCCTCTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
CDS TCA 90 bp CAGCATTCCTCCCCTAGACTCATACCCCTCTTGAGCCGTCGAATCTaGTGTGGTTGTGCTGGGCAAGAGGGAACTGGAATGCCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: QHSSPRLIPLLSRRI*CGCAGQEGTGMPCF
Trigger: AAAACAGGGCATTCCAGTTCCCTCTTGCCCAGCACAACCACATCAGATTCGACGGCTCAAGAGGGGTATGAGTCTAGGGGAGGAATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS GCA 90 bp GACCATTGTTCTCAGGAACCATGGCCTGTTGAAGATGGAGGGCACTaGCTCATCCATGAGCGGGTGCGTCTTGATGAAGTTCAGGGTATC +
Preference number: 5 (lower is better)
Translates to: DHCSQEPWPVEDGGH*LIHERVRLDEVQGI
Trigger: GATACCCTGAACTTCATCAAGACGCACCCGCTCATGGATGAGGCAGTGCCCTCCATCTTCAACAGGCCATGGTTCCTGAGAACAATGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000514316.1
CDS GCA 90 bp GCTTGTCTCTTTGGGGGAAATAGTCGCGGCGACTACTTTCTGGGATaGAAACGCGATGTGTTCATCTCCAATGACGAGCGGAGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: ACLFGGNSRGDYFLG*KRDVFISNDERRRG
Trigger: TCCCCTTCTCCGCTCGTCATTGGAGATGAACACATCGCGTTTGCATCCCAGAAAGTAGTCGCCGCGACTATTTCCCCCAAAGAGACAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCAAACAGTGCAACGTaGGCATGTTTGGCATCATAT +
Preference number: 5 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLANSAT*ACLASY
Trigger: ATATGATGCCAAACATGCCAACGTTGCACTGTTTGC...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp TGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTTGTTTCTCCAGGACTCTTaGAGATCCTCCCATATCATT +
Preference number: 5 (lower is better)
Translates to: WVLEAVENLAELSGHLALFLQDS*RSSHII
Trigger: AATGATATGGGAGGATCTCAAAGAGTCCTGGAGAAA...CAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCACAACATCACGCCCGTaGATACGAATCACATCTGTA +
Preference number: 5 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFTTSRP*IRITSV
Trigger: TACAGATGTGATTCGTATCAACGGGCGTGATGTTGT...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGGGAACTCATTGGAGGTaGCATATCTTTCTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEGTHWR*HIFLRR
Trigger: CCTCCTTAGAAAGATATGCAACCTCCAATGAGTTCC...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp GCATATTGCAAGCTGGTGCCTTCACAGAAAGTCAGAACCATGGACAAAACCATGGTGAGCTCCTTCTCCTaGCGCTGCACCACAGCCACG +
Preference number: 5 (lower is better)
Translates to: AYCKLVPSQKVRTMDKTMVSSFS*RCTTAT
Trigger: CGTGGCTGTGGTGCAGCGCAAGGAGAAGGAGCTCAC...CATGGTTTTGTCCATGGTTCTGACTTTCTGTGAAGGCACCAGCTTGCAATATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp GCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTCTGCTGAGATGTTCCTaGATGGTCTTATACTCCAGT +
Preference number: 5 (lower is better)
Translates to: ALPQAFLVWWVLEAVENLLLRCS*MVLYSS
Trigger: ACTGGAGTATAAGACCATCAAGGAACATCTCAGCAG...AAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GTACACAACTCAAGGTGTAAGGCACAAATTTACATGTGGAAAACAGGCTATTCAGGGGCGGGCGGCGGGTaGTCTCCCCTGCCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: VHNSRCKAQIYMWKTGYSGAGGG*SPLPKL
Trigger: GAGCTTTGGCAGGGGAGACAACCCGCCGCCCGCCCC...TGAATAGCCTGTTTTCCACATGTAAATTTGTGCCTTACACCTTGAGTTGTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCGCTTCAGCCCCGACCTaGTCAGTGAGTTGTAGGCGT +
Preference number: 5 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFASAPT*SVSCRR
Trigger: ACGCCTACAACTCACTGACAAGGTCGGGGCTGAAGC...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCTATGTACACGCATCATaGGGCTTCATGGATGTGGAA +
Preference number: 5 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTYVHAS*GFMDVE
Trigger: TTCCACATCCATGAAGCCCAATGATGCGTGTACATA...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGTTTGTGTTTTGCAGGTaGGAACGCAAACCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: QAFLVWWVLEAVENLAELFVFCR*ERKPSL
Trigger: CAGACTGGGTTTGCGTTCCAACCTGCAAAACACAAA...CAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CGTCCTCGGCTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGATGGACAAAACCATGTaGGCATCAATGAGATATGAT +
Preference number: 5 (lower is better)
Translates to: RPRLCRRPSWSGGYSRQLMDKTM*ASMRYD
Trigger: ATCATATCTCATTGATGCCAACATGGTTTTGTCCAT...CAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAGCCGAGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp TCCATGCTTCGCAGCACAGCCAAAGGGTGGTTCCAGTTGGCACAACTAGAAGGCAAAGGGTGGTTCCAGTaGGCACAACTAGAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SMLRSTAKGWFQLAQLEGKGWFQ*AQLEGS
Trigger: ACTGCCTTCTAGTTGTGCCAACTGGAACCACCCTTT...GCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGTGCTGCCACAAAGCTTaGGTAACATTGAAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: FLVWWVLEAVENLAELSGCCHKA*VTLKRS
Trigger: GGACCTCTTCAATGTTACCAAAGCTTTGTGGCAGCA...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS GCA 90 bp TCTTGTCTTGGTGATTATGGGAAGACACTGCCCCCAAAGGGTCTGTaGTGTCAGGTGAGTCAAGCAGATGCTTCCAGTCCAGCATTCCTC +
Preference number: 5 (lower is better)
Translates to: SCLGDYGKTLPPKGL*CQVSQADASSPAFL
Trigger: GAGGAATGCTGGACTGGAAGCATCTGCTTGACTCACCTGACAGCACAGACCCTTTGGGGGCAGTGTCTTCCCATAATCACCAAGACAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000513137.5
CDS GCA 90 bp CAAATACAGTTAGGAAAACATCACCAGAGAGACCCACATTCCCTTTaGGCAGAGGCCTGGAGGTGGGACACCCAAGCTGGCTGTAAGACT +
Preference number: 5 (lower is better)
Translates to: QIQLGKHHQRDPHSL*AEAWRWDTQAGCKT
Trigger: AGTCTTACAGCCAGCTTGGGTGTCCCACCTCCAGGCCTCTGCGCAAAGGGAATGTGGGTCTCTCTGGTGATGTTTTCCTAACTGTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CCA 90 bp AATCATCTGGATGTCCAGCCTGTGCCTCTGTGTGGTGTTCCGTCCTaGCTTGTGGCCCACAAACACCGGATACTGTTTTGTATAGTTGCC +
Preference number: 5 (lower is better)
Translates to: NHLDVQPVPLCGVPS*LVAHKHRILFCIVA
Trigger: GGCAACTATACAAAACAGTATCCGGTGTTTGTGGGCCACAAGCCAGGACGGAACACCACACAGAGGCACAGGCTGGACATCCAGATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000509665.1
ENST00000510263.5
ENST00000515009.5
CDS CCA 90 bp TGGATGTCCAGCCTGTGCCTCTGTGTGGTGTTCCGTCCTGGCTTGTaGCCCACAAACACCGGATACTGTTTTGTATCATGCCACCATTTT +
Preference number: 5 (lower is better)
Translates to: WMSSLCLCVVFRPGL*PTNTGYCFVSCHHF
Trigger: AAAATGGTGGCATGATACAAAACAGTATCCGGTGTTTGTGGGCCACAAGCCAGGACGGAACACCACACAGAGGCACAGGCTGGACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503962.1
CDS CCA 90 bp AATCATCTGGATGTCCAGCCTGTGCCTCTGTGTGGTGTTCCGTCCTaGCTTGTGGCCCACAAACACCGGATACTGTTTTGTATCATGCCA +
Preference number: 5 (lower is better)
Translates to: NHLDVQPVPLCGVPS*LVAHKHRILFCIMP
Trigger: TGGCATGATACAAAACAGTATCCGGTGTTTGTGGGCCACAAGCCAGGACGGAACACCACACAGAGGCACAGGCTGGACATCCAGATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503962.1
CDS-3UTR CAA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCTCCGTAATCCACGGCTaGAACAAAGTATGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTSVIHG*NKVWFF
Trigger: AAAGAACCATACTTTGTTCAAGCCGTGGATTACGGA...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp TGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGTTTCTCCAGGACTCTTaGAGATCCTCCCATATCATT +
Preference number: 5 (lower is better)
Translates to: CRRPSWSGGYSRQLRTLLFLQDS*RSSHII
Trigger: AATGATATGGGAGGATCTCAAAGAGTCCTGGAGAAA...CAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp GAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGGAGACTTCTGTTCCTaGAATCTCCCAGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: ENEGESPPLQTFTKPRGPGDFCS*NLPVKT
Trigger: TGTTTTTACTGGGAGATTCAAGGAACAGAAGTCTCC...TGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp CTGGACAAGACAGCCGCTTACGTCAATGATGGGTGCTGCACTGCCAGTACTCTCCACTCCCTTCTTGTCTaGGTGATTATGGGAAGACAC +
Preference number: 5 (lower is better)
Translates to: LDKTAAYVNDGCCTASTLHSLLV*VIMGRH
Trigger: GTGTCTTCCCATAATCACCAAGACAAGAAGGGAGTG...GAGAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTGCTTCTGCTGCAGCGTaGGGGTTGACTCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCASAAA*GLTLGW
Trigger: CCACCCCAGAGTCAACCCCAACGCTGCAGCAGAAGC...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GAAGAGAATGAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCTGCTGAGATGTTCCTaGATGGTCTTATACTCCAGT +
Preference number: 5 (lower is better)
Translates to: EENEGESPPLQTFTKPRGLLRCS*MVLYSS
Trigger: ACTGGAGTATAAGACCATCAAGGAACATCTCAGCAG...GCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTCATTCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCTGCTGAGATGTTCCTaGATGGTCTTATACTCCAGT +
Preference number: 5 (lower is better)
Translates to: FLVWWVLEAVENLAELSGLLRCS*MVLYSS
Trigger: ACTGGAGTATAAGACCATCAAGGAACATCTCAGCAG...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGTTGGAGGAGTTAGTGTaGTTTCTTTTGAGAGTGGTG +
Preference number: 5 (lower is better)
Translates to: PQAFLVWWVLEAVENLAELEELV*FLLRVV
Trigger: CACCACTCTCAAAAGAAACAACACTAACTCCTCCAA...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GAAGGTGAGTCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCTTGGAGGAGTTAGTGTaGTTTCTTTTGAGAGTGGTG +
Preference number: 5 (lower is better)
Translates to: EGESPPLQTFTKPRGPVFLEELV*FLLRVV
Trigger: CACCACTCTCAAAAGAAACAACACTAACTCCTCCAA...GAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGACTCACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TCCCCGCCGTTGCAAACCTTCACCAAACCACGCGGCCCAGTTTTCGTGAGTACCTTGGAGGAGTTAGTGTaGTTTCTTTTGAGAGTGGTG +
Preference number: 5 (lower is better)
Translates to: SPPLQTFTKPRGPVFVSTLEELV*FLLRVV
Trigger: CACCACTCTCAAAAGAAACAACACTAACTCCTCCAA...GGTACTCACGAAAACTGGGCCGCGTGGTTTGGTGAAGGTTTGCAACGGCGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCGCTTCAGCCCCGACCTaGTCAGTGAGTTGTAGGCGT +
Preference number: 5 (lower is better)
Translates to: SLATSREVVDKMFQFLFTASAPT*SVSCRR
Trigger: ACGCCTACAACTCACTGACAAGGTCGGGGCTGAAGC...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTCTGCCGCAGGCCTTCTaGGTCTGGTGGGTACTCGAG +
Preference number: 5 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCLPQAF*VWWVLE
Trigger: CTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAG...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AAGTCTTTTGTGGGTCCGACCTGTTGTAGGGTGTGGGGGAAAGTGAAGGAAGAGGGCCAGTGTCCTTCTTaGATATTCCCATGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: KSFVGPTCCRVWGKVKEEGQCPS*IFPWQH
Trigger: GTGCTGCCATGGGAATATCAAAGAAGGACACTGGCC...CTCTTCCTTCACTTTCCCCCACACCCTACAACAGGTCGGACCCACAAAAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS GCA 90 bp TCAGTGCCACAAAGGAATTGTGACAGTCCCCCAGACCATCTGTATTaGCACGCTCTATGTCCTGCTCAAAAGTCAGTCTGCTGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: SVPQRNCDSPPDHLY*HALCPAQKSVCCWV
Trigger: CACCCAACAGCAGACTGACTTTTGAGCAGGACATAGAGCGTGGCAATACAGATGGTCTGGGGGACTGTCACAATTCCTTTGTGGCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTGTGTGCTTGTCTCTTaGGGGGAAATAGTCGCGGCG +
Preference number: 5 (lower is better)
Translates to: KPSLATSREVVDKMFQFLCVLVS*GEIVAA
Trigger: CGCCGCGACTATTTCCCCCAAAGAGACAAGCACACA...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTGTTCCGTCCTGGCTaGTGGCCCACAAACACCGGA +
Preference number: 5 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACVFRPG*WPTNTG
Trigger: TCCGGTGTTTGTGGGCCACAAGCCAGGACGGAACAC...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGAGGTTCACCCCATGGTaGGGACTCTTGCTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: KPSLATSREVVDKMFQFLRFTPW*GLLLLR
Trigger: TCTCAGCAGCAAGAGTCCCAACCATGGGGTGAACCT...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGAAATGTATTTGTGTTTaGCAGGTTGGAACGCAAACC +
Preference number: 5 (lower is better)
Translates to: PQAFLVWWVLEAVENLAEKCICV*QVGTQT
Trigger: GGTTTGCGTTCCAACCTGCAAAACACAAATACATTT...CTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CTCTGCCGCAGGCCTTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGAAATGTATTTGTGTTTaGCAGGTTGGAACGCAAACC +
Preference number: 5 (lower is better)
Translates to: LCRRPSWSGGYSRQLRTLKCICV*QVGTQT
Trigger: GGTTTGCGTTCCAACCTGCAAAACACAAATACATTT...CAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAAGGCCTGCGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TCCATGCTTCGCAGCACAGCCAAAGGGTGGTTCCAGTTGGCACAACTAGAAGGCTTCCATGTCATTTCTTaGTGTGCACTGCACGTGTGT +
Preference number: 5 (lower is better)
Translates to: SMLRSTAKGWFQLAQLEGFHVIS*CALHVC
Trigger: ACACACGTGCAGTGCACACAAAGAAATGACATGGAA...GCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGAGAAGAATGGCTAGGTaGAGAGTTACAGCAGAAACT +
Preference number: 5 (lower is better)
Translates to: FLVWWVLEAVENLAELSGRRMAR*RVTAET
Trigger: AGTTTCTGCTGTAACTCTCAACCTAGCCATTCTTCT...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CAA 90 bp TTCTTGGTCTGGTGGGTACTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGAAATGTATTTGTGTTTaGCAGGTTGGAACGCAAACC +
Preference number: 5 (lower is better)
Translates to: FLVWWVLEAVENLAELSGKCICV*QVGTQT
Trigger: GGTTTGCGTTCCAACCTGCAAAACACAAATACATTT...CCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAGTACCCACCAGACCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TCCATGCTTCGCAGCACAGCCAAAGGGTGGTTCCAGTTGGCACAACTAGAAGGCAAATCCAAATTCCACTaGGATTCCACTTCGGTGAGT +
Preference number: 5 (lower is better)
Translates to: SMLRSTAKGWFQLAQLEGKSKFH*DSTSVS
Trigger: ACTCACCGAAGTGGAATCCAAGTGGAATTTGGATTT...GCCTTCTAGTTGTGCCAACTGGAACCACCCTTTGGCTGTGCTGCGAAGCATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCCCCACTGTCTTTTCATaGGAATGGAGGCTTCAACGG +
Preference number: 5 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFPTVFS*EWRLQR
Trigger: CCGTTGAAGCCTCCATTCCAATGAAAAGACAGTGGG...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS TCA 90 bp TCTGGTAGAGGAGTTGAAATGTCATTCAGTGCCACAAAGGAATTGTaGCAGTCCCCCAGACCATCTGTATTGCCACGCTCTATGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SGRGVEMSFSATKEL*QSPRPSVLPRSMSC
Trigger: GCAGGACATAGAGCGTGGCAATACAGATGGTCTGGGGGACTGTCACAATTCCTTTGTGGCACTGAATGACATTTCAACTCCTCTACCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257414.12
CDS GCA 90 bp AACCTTTATCACACAGGTAGAGAACGCAACATACAGAGAGCTGCTTaGTCTGTCCAGCTGCATGCCCATGATCCTTTTGTCTTCGACTCC +
Preference number: 5 (lower is better)
Translates to: NLYHTGRERNIQRAA*SVQLHAHDPFVFDS
Trigger: GGAGTCGAAGACAAAAGGATCATGGGCATGCAGCTGGACAGAGCAAGCAGCTCTCTGTATGTTGCGTTCTCTACCTGTGTGATAAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000515129.5
CDS CCA 90 bp CTAAACACAGAAAGTGTCCACTCTGGGAATCCCATTTGTGACCGATaGGGCAGGTTTCTGGTAGTGGGTAAGTCTTGTCCCTATCACAAG +
Preference number: 5 (lower is better)
Translates to: LNTESVHSGNPICDR*GRFLVVGKSCPYHK
Trigger: CTTGTGATAGGGACAAGACTTACCCACTACCAGAAACCTGCCCCATCGGTCACAAATGGGATTCCCAGAGTGGACACTTTCTGTGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CAA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTGCTTTAATGAGCATCTaGGCCGTGTTGCCGGGAGTG +
Preference number: 5 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCALMSI*AVLPGV
Trigger: CACTCCCGGCAACACGGCCAAGATGCTCATTAAAGC...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTCCTTTGTGCAGGCATaGATGAGGTTCTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: KPSLATSREVVDKMFQFLSFVQA*MRFWFL
Trigger: GAGGAACCAGAACCTCATCAATGCCTGCACAAAGGA...CAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CACTGGACAAGACAGCCGCTTACGTCAATGATGGGTGCTGCACTGCCAGTACTCAAATGTATTTGTGTTTaGCAGGTTGGAACGCAAACC +
Preference number: 5 (lower is better)
Translates to: HWTRQPLTSMMGAALPVLKCICV*QVGTQT
Trigger: GGTTTGCGTTCCAACCTGCAAAACACAAATACATTT...GAGTACTGGCAGTGCAGCACCCATCATTGACGTAAGCGGCTGTCTTGTCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS TCA 90 bp ACGCAACATACAGAGAGCTGCTTGCTCTGTCCAGCTGCATGCCCATaGTCCTTTTGTCTTCGACTCCATCATAGCTGCATTTTTCAGAGT +
Preference number: 5 (lower is better)
Translates to: TQHTESCLLCPAACP*SFCLRLHHSCIFQS
Trigger: ACTCTGAAAAATGCAGCTATGATGGAGTCGAAGACAAAAGGATCATGGGCATGCAGCTGGACAGAGCAAGCAGCTCTCTGTATGTTGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000510263.5
ENST00000515129.5
CDS TCA 90 bp CAACGTTGGCATGTTTGGCATCATATGGGCATCTGGCCATTCCGCTaGATTCATCCCCGAATGGTTCCAATGTATCCATCTATAGCTGGT +
Preference number: 5 (lower is better)
Translates to: QRWHVWHHMGIWPFR*IHPRMVPMYPSIAG
Trigger: ACCAGCTATAGATGGATACATTGGAACCATTCGGGGATGAATTCAGCGGAATGGCCAGATGCCCATATGATGCCAAACATGCCAACGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502996.5
CDS TCA 90 bp CAGTGTCTGACACATAGGTGCTCAAGAAAGGCCAGTGTCCTTCTTTaGTATTCCCATGGCAGCACTAAACACAGAAAGTGTCCACTCTGG +
Preference number: 5 (lower is better)
Translates to: QCLTHRCSRKASVLL*YSHGSTKHRKCPLW
Trigger: CCAGAGTGGACACTTTCTGTGTTTAGTGCTGCCATGGGAATATCAAAGAAGGACACTGGCCTTTCTTGAGCACCTATGTGTCAGACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CCA 90 bp TTTTCCATCTGCAAACAGTGCAACGTTGGCATGTTTGGCATCATATaGGCATCTGGCCATTCCGCTGAATTCATCCCCGAATGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: FSICKQCNVGMFGII*ASGHSAEFIPEWFQ
Trigger: TTGGAACCATTCGGGGATGAATTCAGCGGAATGGCCAGATGCCCATATGATGCCAAACATGCCAACGTTGCACTGTTTGCAGATGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000502996.5
ENST00000503962.1
ENST00000510263.5
CDS-3UTR CAA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTCTTTGGGTCTTTGGATaGAGTGTCCCCAAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACLWVFG*SVPKEA
Trigger: GGCCTCTTTGGGGACACTCAATCCAAAGACCCAAAG...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCCTGCTGAGATGTTCCTaGATGGTCTTATACTCCAGT +
Preference number: 5 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFLLRCS*MVLYSS
Trigger: ACTGGAGTATAAGACCATCAAGGAACATCTCAGCAG...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS TCA 90 bp AGAAACTCTTCTCCAAATCCAAATTCCACTTGGATTCCACTTCGGTaGGTCCCCTTGGTGGTGTCTGCGCCGATTAACAAGTCATTTCAG +
Preference number: 5 (lower is better)
Translates to: RNSSPNPNSTWIPLR*VPLVVSAPINKSFQ
Trigger: CTGAAATGACTTGTTAATCGGCGCAGACACCACCAAGGGGACTCACCGAAGTGGAATCCAAGTGGAATTTGGATTTGGAGAAGAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS TCA 90 bp GCTGGTCAAAGGCAAGAAGTAGTGAAGTACAAATGTTTCGGTTTGTaGGGTTGGAAAGGTCCAGAGGCAAAAGCCATGGTGACTTCCTCT +
Preference number: 5 (lower is better)
Translates to: AGQRQEVVKYKCFGL*GWKGPEAKAMVTSS
Trigger: AGAGGAAGTCACCATGGCTTTTGCCTCTGGACCTTTCCAACCTCACAAACCGAAACATTTGTACTTCACTACTTCTTGCCTTTGACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502996.5
CDS TCA 90 bp CTCTACCCCTTCCCAAGCCCACAACACGCAACCTTAAACTTCTACTaGAATGTTGTCTTTGTCACAGCCGAGACCTTGAAGCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: LYPFPSPQHATLNFY*NVVFVTAETLKLSH
Trigger: ATGAGAAAGCTTCAAGGTCTCGGCTGTGACAAAGACAACATTTCAGTAGAAGTTTAAGGTTGCGTGTTGTGGGCTTGGGAAGGGGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503865.1
CDS GCA 90 bp AAAAACCACAGTGTGATTCTGATATGGCCCAGCAGCTGTGTCCACTaGAATTTTGGTAAGGCGGTATCTGACCATTGTTCTCAGGAACCA +
Preference number: 5 (lower is better)
Translates to: KNHSVILIWPSSCVH*NFGKAVSDHCSQEP
Trigger: TGGTTCCTGAGAACAATGGTCAGATACCGCCTTACCAAAATTGCAGTGGACACAGCTGCTGGGCCATATCAGAATCACACTGTGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000510263.5
ENST00000514316.1
CDS-3UTR CAA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTTTCTGCAGGAAGGGTaGAAGGCATTAGTTCCACAG +
Preference number: 5 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVFLQEG*KALVPQ
Trigger: CTGTGGAACTAATGCCTTCAACCCTTCCTGCAGAAA...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGCAACGTTGGCATGTTaGGCATCATATGGGCATCTG +
Preference number: 5 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACATLAC*ASYGHL
Trigger: CAGATGCCCATATGATGCCAAACATGCCAACGTTGC...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp AACAACAACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATAGGAACCATGGCCTGTaGAAGATGGAGGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: NNNTAHGLQYVDSSFVHDRNHGL*KMEGTA
Trigger: GGCAGTGCCCTCCATCTTCAACAGGCCATGGTTCCT...ATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTTGTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTTCCTTTGTGCAGGCATaGATGAGGTTCTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACSFVQA*MRFWFL
Trigger: GAGGAACCAGAACCTCATCAATGCCTGCACAAAGGA...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp GCAAACCCAGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCGGTAGGTATGTGCTTTaGGCTCATGTTTGTGATGAT +
Preference number: 5 (lower is better)
Translates to: ANPVWPRPVKLWTKCFSFGRYVL*AHVCDD
Trigger: ATCATCACAAACATGAGCCAAAAGCACATACCTACC...GAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACTGGGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp AACAACAACACTGCTCATGGTTTACAGTATGTGGACAGTTCCTTTGTTCATGATTGCTGTGCACATGGCTaGGAGACTCCTCCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: NNNTAHGLQYVDSSFVHDCCAHG*ETPPRC
Trigger: ACACCTGGGAGGAGTCTCCAAGCCATGTGCACAGCA...ATCATGAACAAAGGAACTGTCCACATACTGTAAACCATGAGCAGTGTTGTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS TCA 90 bp CAACGTTGGCATGTTTGGCATCATATGGGCATCTGGCCATTCCGCTaGATTCATCCCCGAATGGTTCCAATGTATCCATCTTATAGTTTC +
Preference number: 5 (lower is better)
Translates to: QRWHVWHHMGIWPFR*IHPRMVPMYPSYSF
Trigger: GAAACTATAAGATGGATACATTGGAACCATTCGGGGATGAATTCAGCGGAATGGCCAGATGCCCATATGATGCCAAACATGCCAACGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503962.1
ENST00000510263.5
CDS GCA 90 bp CGTCCATGCTATAGTGACTTCTATGGAGCCACCACACTTAAATGCTaGCACAAAGCTTTGGTAACATTGAAGAGGTCCCTTTCTGTATGG +
Preference number: 5 (lower is better)
Translates to: RPCYSDFYGATTLKC*HKALVTLKRSLSVW
Trigger: CCATACAGAAAGGGACCTCTTCAATGTTACCAAAGCTTTGTGGCAGCATTTAAGTGTGGTGGCTCCATAGAAGTCACTATAGCATGGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS GCA 90 bp GCTCGTCCATGCTATAGTGACTTCTATGGAGCCACCACACTTAAATaGTGCCACAAAGCTTTGGTAACATTGAAGAGGTCCCTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: ARPCYSDFYGATTLK*CHKALVTLKRSLSV
Trigger: TACAGAAAGGGACCTCTTCAATGTTACCAAAGCTTTGTGGCAGCATTTAAGTGTGGTGGCTCCATAGAAGTCACTATAGCATGGACGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CCA 90 bp AAGATACAAGGGCAACTACTGTGCATGTATAATTGGTGCCTTTGGTaGAAAGTAGGGCAGACTCACAACAACTCCAAAAGCTCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: KIQGQLLCMYNWCLW*KVGQTHNNSKSSSL
Trigger: AAGGCTGGAGCTTTTGGAGTTGTTGTGAGTCTGCCCTACTTTCCACCAAAGGCACCAATTATACATGCACAGTAGTTGCCCTTGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CCA 90 bp TTAGTTAGTGGTTTCCAAAGGGATCTATTCCCACTGTCTTTTCATTaGAATGGAGGCTTCAACGGCTACACGCTATTACGGCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: LVSGFQRDLFPLSFH*NGGFNGYTLLRLSL
Trigger: AAGGGACAGCCGTAATAGCGTGTAGCCGTTGAAGCCTCCATTCCAATGAAAAGACAGTGGGAATAGATCCCTTTGGAAACCACTAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CAA 90 bp AGTCTGGCCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCGGAGACTTCTGTTCCTaGAATCTCCCAGTAAAAACA +
Preference number: 5 (lower is better)
Translates to: SLATSREVVDKMFQFLFTGDFCS*NLPVKT
Trigger: TGTTTTTACTGGGAGATTCAAGGAACAGAAGTCTCC...GGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGGCCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTCACTCCCTTCTTGTCTaGGTGATTATGGGAAGACAC +
Preference number: 5 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCHSLLV*VIMGRH
Trigger: GTGTCTTCCCATAATCACCAAGACAAGAAGGGAGTG...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
CDS-3UTR CAA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCGGTAGGTATGTGCTTTaGGCTCATGTTTGTGATGAT +
Preference number: 5 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCGRYVL*AHVCDD
Trigger: ATCATCACAAACATGAGCCAAAAGCACATACCTACC...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTCCACGTCCCGTGAAGTaGTGGACAAAATGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: FQFLFTSVRVCVCVVCMCPRPVK*WTKCFS
Trigger: ACTGAAACATTTTGTCCACAACTTCACGGGACGTGG...ACACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp CCACGTCCCGTGAAGTTGTGGACAAAATGTTTCAGTTTCTGTTCACCTCTGTGCGGCATTTCACAGTATTaGCGCATAGTAAACTTCTGC +
Preference number: 5 (lower is better)
Translates to: PRPVKLWTKCFSFCSPLCGISQY*RIVNFC
Trigger: GCAGAAGTTTACTATGCGCAAATACTGTGAAATGCC...GCACAGAGGTGAACAGAAACTGAAACATTTTGTCCACAACTTCACGGGACGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS-3UTR CAA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTAAATGGGATGGCATATaGCAAGCTGGTGCCTTCACA +
Preference number: 5 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACKWDGI*QAGAFT
Trigger: TGTGAAGGCACCAGCTTGCAATATGCCATCCCATTT...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGCTTTCTGTATGGCACTaGTTTGGCTCTCACACAAGT +
Preference number: 5 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVLSVWH*FGSHTS
Trigger: ACTTGTGTGAGAGCCAAACAAGTGCCATACAGAAAG...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS TCA 90 bp TGGCAGGCTCTGAGGGCTGGAAACTTTGCCTTTAACTGGGTTTACTaGACCAATGAGAAGGCAAAAGAGATGCTTTTCTCAGAAATGTTG +
Preference number: 5 (lower is better)
Translates to: WQALRAGNFAFNWVY*TNEKAKEMLFSEML
Trigger: CAACATTTCTGAGAAAAGCATCTCTTTTGCCTTCTCATTGGTTCAGTAAACCCAGTTAAAGGCAAAGTTTCCAGCCCTCAGAGCCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512156.1
CDS TCA 90 bp AGAAGGAAGCCAGGAAGAATTGATGAGGTCAACACAGCTAGGGCATaGTTACCTGTTATAAGGTGTAGAAAACGTTGCCAGGACAACATC +
Preference number: 5 (lower is better)
Translates to: RRKPGRIDEVNTARA*LPVIRCRKRCQDNI
Trigger: GATGTTGTCCTGGCAACGTTTTCTACACCTTATAACAGGTAATCATGCCCTAGCTGTGTTGACCTCATCAATTCTTCCTGGCTTCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510024.5
CDS-3UTR CAA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGTTGGAGGAGTTAGTGTaGTTTCTTTTGAGAGTGGTG +
Preference number: 5 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVLEELV*FLLRVV
Trigger: CACCACTCTCAAAAGAAACAACACTAACTCCTCCAA...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTTATGTACACGCATCATaGGGCTTCATGGATGTGGAA +
Preference number: 5 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACYVHAS*GFMDVE
Trigger: TTCCACATCCATGAAGCCCAATGATGCGTGTACATA...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000513137.5
ENST00000515129.5
CDS-3UTR CAA 90 bp TGTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTCATTCTTCCATCTGCTaGACTCCAATCTTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: CFSFCSPLCVCVYVLCACHSSIC*TPIFQR
Trigger: CCTCTGAAAGATTGGAGTCAAGCAGATGGAAGAATG...ACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS TCA 90 bp ACTATTTCCTATTCTGGCCAAAAACTTCAAGATGATTCCCTTCTCTaGTCCCAGAAAAACCACAGTGTGATTCTGATATGGCCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TISYSGQKLQDDSLL*SQKNHSVILIWPSS
Trigger: GCTGCTGGGCCATATCAGAATCACACTGTGGTTTTTCTGGGATCAGAGAAGGGAATCATCTTGAAGTTTTTGGCCAGAATAGGAAATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000510263.5
ENST00000514316.1
CDS CCA 90 bp GAAGAGGTCCCTTTCTGTATGGCACTTGTTTGGCTCTCACACAAGTaGGAAACATTCAATTTGTTGAAAATAGTCTGCTTCGTATCCAGC +
Preference number: 5 (lower is better)
Translates to: EEVPFCMALVWLSHK*ETFNLLKIVCFVSS
Trigger: GCTGGATACGAAGCAGACTATTTTCAACAAATTGAATGTTTCCCACTTGTGTGAGAGCCAAACAAGTGCCATACAGAAAGGGACCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS-3UTR CAA 90 bp GCTACAGACCAGACAGTCCAAACACAAAGCTCAGAATTCCAGCTCCAACTTATTTCCGTAATCCACGGCTaGAACAAAGTATGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: ATDQTVQTQSSEFQLQLISVIHG*NKVWFF
Trigger: AAAGAACCATACTTTGTTCAAGCCGTGGATTACGGA...AATAAGTTGGAGCTGGAATTCTGAGCTTTGTGTTTGGACTGTCTGGTCTGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGATTTGTGGATTTTGTTaGCTGTCTCACATGCAAGGT +
Preference number: 5 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVICGFC*LSHMQG
Trigger: ACCTTGCATGTGAGACAGCAAACAAAATCCACAAAT...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS-3UTR CAA 90 bp GTTTCAGTTTCTGTTCACCTCTGTGCGTGTGTGTGTATGTGTTGTGTGCATGTGAAAGCTTTGGTAACATaGAAGAGGTCCCTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: VSVSVHLCACVCMCCVHVKALVT*KRSLSV
Trigger: TACAGAAAGGGACCTCTTCAATGTTACCAAAGCTTT...CACATGCACACAACACATACACACACACGCACAGAGGTGAACAGAAACTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS TCA 90 bp AAAGCCATGGTGACTTCCTCTTTCCAAGAAGTGAAAACTAACCCTTaGAGCAGTCATCAAATCTTAGACTTCACAGCAGCAGCTCCTTAT +
Preference number: 5 (lower is better)
Translates to: KAMVTSSFQEVKTNP*SSHQILDFTAAAPY
Trigger: ATAAGGAGCTGCTGCTGTGAAGTCTAAGATTTGATGACTGCTTCAAGGGTTAGTTTTCACTTCTTGGAAAGAGGAAGTCACCATGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502996.5
CDS GCA 90 bp AGCCACTCTTGGGAAAACTACCTTTCCCATGGTGTTATACTCCACTaGTATTTCCCTGAAGAAGAAGTAGATATAATCTCCGTAATCCAC +
Preference number: 5 (lower is better)
Translates to: SHSWENYLSHGVILH*YFPEEEVDIISVIH
Trigger: GTGGATTACGGAGATTATATCTACTTCTTCTTCAGGGAAATAGCAGTGGAGTATAACACCATGGGAAAGGTAGTTTTCCCAAGAGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000502996.5
ENST00000510024.5
ENST00000510263.5
CDS CCA 90 bp CCAAAAGTGCTAATGTTAACAATATCTAATGATACAGGAATCCCATaGCAGGCTCTGAGGGCTGGAAACTTTGCCTTTAACTGGGTTTAC +
Preference number: 5 (lower is better)
Translates to: PKVLMLTISNDTGIP*QALRAGNFAFNWVY
Trigger: GTAAACCCAGTTAAAGGCAAAGTTTCCAGCCCTCAGAGCCTGCCATGGGATTCCTGTATCATTAGATATTGTTAACATTAGCACTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512156.1
CDS TCA 90 bp GGAAAACTACCTTTCCCATGGTGTTATACTCCACTGCTATTTCCCTaGAGAAGAAGTAGATATAATCTCCGTAATCCACGGCTTGAACAA +
Preference number: 5 (lower is better)
Translates to: GKLPFPWCYTPLLFP*RRSRYNLRNPRLEQ
Trigger: TTGTTCAAGCCGTGGATTACGGAGATTATATCTACTTCTTCTTCAGGGAAATAGCAGTGGAGTATAACACCATGGGAAAGGTAGTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000502996.5
ENST00000510024.5
ENST00000510263.5
CDS GCA 72 bp GCATCGCGGGCGACCGGCACCGCGGAGGAGCGCCGCTaGTGGGTTCCGAGCGCCTGGGCAGCCGAGTGCGCG +
Preference number: 6 (lower is better)
Translates to: ASRATGTAEERR*WVPSAWAAECA
Trigger: CGCGCACTCGGCTGCCCAGGCGCTCGGAACCCAGCAGCGGCGCTCCTCCGCGGTGCCGGTCGCCCGCGATGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS GCA 72 bp GGGCTGGGGCAGGGGTGCAAGGCTCTGGCCCGGCTCTaGGGCCGGCAGCGCGGTGCCGCGGGTGTGGTGATG +
Preference number: 6 (lower is better)
Translates to: GLGQGCKALARL*GRQRGAAGVVM
Trigger: CATCACCACACCCGCGGCACCGCGCTGCCGGCCGCAGAGCCGGGCCAGAGCCTTGCACCCCTGCCCCAGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS GCA 72 bp CAAGGCTCTGGCCCGGCTCTGCGGCCGGCAGCGCGGTaGCGCGGGTGTGGTGATGCTGGCCGCTGCTACACG +
Preference number: 6 (lower is better)
Translates to: QGSGPALRPAAR*RGCGDAGRCYT
Trigger: CGTGTAGCAGCGGCCAGCATCACCACACCCGCGGCACCGCGCTGCCGGCCGCAGAGCCGGGCCAGAGCCTTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS TCA 72 bp GGCTCTGCGGCCGGCAGCGCGGTGCCGCGGGTGTGGTaGTGCTGGCCGCTGCTACACGCTGCTAAGCGGGCA +
Preference number: 6 (lower is better)
Translates to: GSAAGSAVPRVW*CWPLLHAAKRA
Trigger: TGCCCGCTTAGCAGCGTGTAGCAGCGGCCAGCATCACCACACCCGCGGCACCGCGCTGCCGGCCGCAGAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS GCA 72 bp GCAGCGCGGTGCCGCGGGTGTGGTGATGCTGGCCGCTaGTACACGCTGCTAAGCGGGCATCGCGGGCGACCG +
Preference number: 6 (lower is better)
Translates to: AARCRGCGDAGR*YTLLSGHRGRP
Trigger: CGGTCGCCCGCGATGCCCGCTTAGCAGCGTGTAGCAGCGGCCAGCATCACCACACCCGCGGCACCGCGCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS CCA 72 bp AGCTTGGTGACGCTGCTCATGGAGCCCCGGCGCGAGTaGGTGAGCTCCTTCTCCTTGCGCTGCACCACAGCC +
Preference number: 6 (lower is better)
Translates to: SLVTLLMEPRRE*VSSFSLRCTTA
Trigger: GGCTGTGGTGCAGCGCAAGGAGAAGGAGCTCACCCACTCGCGCCGGGGCTCCATGAGCAGCGTCACCAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CCA 72 bp CCGGGGGACCCAGGGAGGCCTCCCGCTGTGGAACTTTaGGGGGCAGGCTGTCCAGGTTCTCCACAAGGTTCA +
Preference number: 6 (lower is better)
Translates to: PGDPGRPPAVEL*GAGCPGSPQGS
Trigger: TGAACCTTGTGGAGAACCTGGACAGCCTGCCCCCCAAAGTTCCACAGCGGGAGGCCTCCCTGGGTCCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CCA 72 bp GCGTTGAGGCTGGGCTGCCTCGAGACAGTCACGGCCTaGCCAGATGGCTGGGAGCTGTGCACCTGGATGGAG +
Preference number: 6 (lower is better)
Translates to: ALRLGCLETVTA*PDGWELCTWME
Trigger: CTCCATCCAGGTGCACAGCTCCCAGCCATCTGGCCAGGCCGTGACTGTCTCGAGGCAGCCCAGCCTCAACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CAA 72 bp TGGATGGAGTCCACCCTCTGCGGGGCGGGCGGCGGGTaGTCTCCCCTGCCAAAGCTCTGGTTTCTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: WMESTLCGAGGG*SPLPKLWFLER
Trigger: CCTCTCCAGAAACCAGAGCTTTGGCAGGGGAGACAACCCGCCGCCCGCCCCGCAGAGGGTGGACTCCATCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS GCA 72 bp TTGGCCGTGTTGCCGGGAGTGGCGAGCTTGCCGTTGTaGATGAGTGGCGTGAGGATGGCCTCCGGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: LAVLPGVASLPL*MSGVRMASGFG
Trigger: CCCAAAGCCGGAGGCCATCCTCACGCCACTCATGCACAACGGCAAGCTCGCCACTCCCGGCAACACGGCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS TCA 72 bp GCTTCAGCCCCGACCTTGTCAGTGAGTTGTAGGCGTTaGGGCTGGGCTGCCTCGAGACAGTCACGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: ASAPTLSVSCRR*GWAASRQSRPG
Trigger: GCCAGGCCGTGACTGTCTCGAGGCAGCCCAGCCTCAACGCCTACAACTCACTGACAAGGTCGGGGCTGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS GCA 72 bp CCCCGTAGGAAGAGGAGTGGTGCATTTCCAGCCGCTTaGTTAGACCGGTCTGAGACAGGGAGGCTCCCGGGG +
Preference number: 6 (lower is better)
Translates to: PRRKRSGAFPAA*LDRSETGRLPG
Trigger: CCCCGGGAGCCTCCCTGTCTCAGACCGGTCTAAGCAAGCGGCTGGAAATGCACCACTCCTCTTCCTACGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CAA 90 bp CTCGAGGCAGTTGAGAACCTTGCTGAGCTGAGCGGGCACCTCGCCTaGCCTGCTGGTTCGACACCTGACCCCCTCCCCCTGGGATTATGT +
Preference number: 6 (lower is better)
Translates to: LEAVENLAELSGHLA*PAGSTPDPLPLGLC
Trigger: ACATAATCCCAGGGGGAGGGGGTCAGGTGTCGAACCAGCAGGCAAGGCGAGGTGCCCGCTCAGCTCAGCAAGGTTCTCAACTGCCTCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS GCA 72 bp GGTGGGGAGGGCCGTCAGGTCCAGGTGGTGCTGGTCTaGTTTAATGAGCATCTTGGCCGTGTTGCCGGGAGT +
Preference number: 6 (lower is better)
Translates to: GGEGRQVQVVLV*FNEHLGRVAGS
Trigger: ACTCCCGGCAACACGGCCAAGATGCTCATTAAAGCAGACCAGCACCACCTGGACCTGACGGCCCTCCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CCA 72 bp GTTGCCGGGAGTGGCGAGCTTGCCGTTGTGCATGAGTaGCGTGAGGATGGCCTCCGGCTTTGGGTCTTTGGA +
Preference number: 6 (lower is better)
Translates to: VAGSGELAVVHE*REDGLRLWVFG
Trigger: TCCAAAGACCCAAAGCCGGAGGCCATCCTCACGCCACTCATGCACAACGGCAAGCTCGCCACTCCCGGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CCA 72 bp TCTGGGGTGGGGAGGGCCGTCAGGTCCAGGTGGTGCTaGTCTGCTTTAATGAGCATCTTGGCCGTGTTGCCG +
Preference number: 6 (lower is better)
Translates to: SGVGRAVRSRWC*SALMSILAVLP
Trigger: CGGCAACACGGCCAAGATGCTCATTAAAGCAGACCAGCACCACCTGGACCTGACGGCCCTCCCCACCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CAA 72 bp ATCTTGGCCGTGTTGCCGGGAGTGGCGAGCTTGCCGTaGTGCATGAGTGGCGTGAGGATGGCCTCCGGCTTT +
Preference number: 6 (lower is better)
Translates to: ILAVLPGVASLP*CMSGVRMASGF
Trigger: AAAGCCGGAGGCCATCCTCACGCCACTCATGCACAACGGCAAGCTCGCCACTCCCGGCAACACGGCCAAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CAA 72 bp ATGAGCATCTTGGCCGTGTTGCCGGGAGTGGCGAGCTaGCCGTTGTGCATGAGTGGCGTGAGGATGGCCTCC +
Preference number: 6 (lower is better)
Translates to: MSILAVLPGVAS*PLCMSGVRMAS
Trigger: GGAGGCCATCCTCACGCCACTCATGCACAACGGCAAGCTCGCCACTCCCGGCAACACGGCCAAGATGCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CAA 72 bp CCGGGCCGCGGGCTGCGCTCTCTCCTTCGCAAGCCTTaGTCATTCCTACATGTGTGCTTGTCTCTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: PGRGLRSLLRKP*SFLHVCLSLWG
Trigger: CCCCCAAAGAGACAAGCACACATGTAGGAATGACAAAGGCTTGCGAAGGAGAGAGCGCAGCCCGCGGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS CAA 90 bp TCTGCTTTAATGAGCATCTTGGCCGTGTTGCCGGGAGTGGCGAGCTaGCCGTTGTGCATGAGTGGCGTGAGGATGGCCTCCGGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: SALMSILAVLPGVAS*PLCMSGVRMASGFG
Trigger: CCCAAAGCCGGAGGCCATCCTCACGCCACTCATGCACAACGGCAAGCTCGCCACTCCCGGCAACACGGCCAAGATGCTCATTAAAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CAA 90 bp AGGTCCAGGTGGTGCTGGTCTGCTTTAATGAGCATCTTGGCCGTGTaGCCGGGAGTGGCGAGCTTGCCGTTGTGCATGAGTGGCGTGAGG +
Preference number: 6 (lower is better)
Translates to: RSRWCWSALMSILAV*PGVASLPLCMSGVR
Trigger: CCTCACGCCACTCATGCACAACGGCAAGCTCGCCACTCCCGGCAACACGGCCAAGATGCTCATTAAAGCAGACCAGCACCACCTGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CCA 72 bp CACCAGAGAGACCCACATTCCCTTTGCGCAGAGGCCTaGAGGTGGGACACCCAAGCTGGCTGTAAGACTGAG +
Preference number: 6 (lower is better)
Translates to: HQRDPHSLCAEA*RWDTQAGCKTE
Trigger: CTCAGTCTTACAGCCAGCTTGGGTGTCCCACCTCCAGGCCTCTGCGCAAAGGGAATGTGGGTCTCTCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CAA 72 bp AGGTCCAGGTGGTGCTGGTCTGCTTTAATGAGCATCTaGGCCGTGTTGCCGGGAGTGGCGAGCTTGCCGTTG +
Preference number: 6 (lower is better)
Translates to: RSRWCWSALMSI*AVLPGVASLPL
Trigger: CAACGGCAAGCTCGCCACTCCCGGCAACACGGCCAAGATGCTCATTAAAGCAGACCAGCACCACCTGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CAA 90 bp TTAATGAGCATCTTGGCCGTGTTGCCGGGAGTGGCGAGCTTGCCGTaGTGCATGAGTGGCGTGAGGATGGCCTCCGGCTTTGGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: LMSILAVLPGVASLP*CMSGVRMASGFGSL
Trigger: CAAAGACCCAAAGCCGGAGGCCATCCTCACGCCACTCATGCACAACGGCAAGCTCGCCACTCCCGGCAACACGGCCAAGATGCTCATTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS GCA 72 bp AATCCATTATCGAGGGGATCTCTCCGGGCCGCGGGCTaGGCTCTCTCCTTCGCAAGCCTTTGTCATTCCTAC +
Preference number: 6 (lower is better)
Translates to: NPLSRGSLRAAG*ALSFASLCHSY
Trigger: GTAGGAATGACAAAGGCTTGCGAAGGAGAGAGCGCAGCCCGCGGCCCGGAGAGATCCCCTCGATAATGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS CCA 72 bp GTTGTGCATGAGTGGCGTGAGGATGGCCTCCGGCTTTaGGTCTTTGGATTGAGTGTCCCCAAAGAGGCCGCT +
Preference number: 6 (lower is better)
Translates to: VVHEWREDGLRL*VFGLSVPKEAA
Trigger: AGCGGCCTCTTTGGGGACACTCAATCCAAAGACCCAAAGCCGGAGGCCATCCTCACGCCACTCATGCACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CCA 72 bp GCTTCATGGATGTGGAAAGGGGAGCAAAGGATGGTTTaGGGGGTACGTCCGGCTTTAGCGAGGGCGTACGCT +
Preference number: 6 (lower is better)
Translates to: ASWMWKGEQRMV*GVRPALARAYA
Trigger: AGCGTACGCCCTCGCTAAAGCCGGACGTACCCCCCAAACCATCCTTTGCTCCCCTTTCCACATCCATGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CCA 72 bp AGAGACCCACATTCCCTTTGCGCAGAGGCCTGGAGGTaGGACACCCAAGCTGGCTGTAAGACTGAGAGGAGA +
Preference number: 6 (lower is better)
Translates to: RDPHSLCAEAWR*DTQAGCKTERR
Trigger: TCTCCTCTCAGTCTTACAGCCAGCTTGGGTGTCCCACCTCCAGGCCTCTGCGCAAAGGGAATGTGGGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CAA 72 bp CAACAGGGCCTCCTCCCTAAGCCAGGAAAGGCAGGCTaGGGCGTTGAGATGGTCAACAGCAGATACAGCCCA +
Preference number: 6 (lower is better)
Translates to: QQGLLPKPGKAG*GVEMVNSRYSP
Trigger: TGGGCTGTATCTGCTGTTGACCATCTCAACGCCCAAGCCTGCCTTTCCTGGCTTAGGGAGGAGGCCCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509665.1
CDS CAA 90 bp ACAAGGTTCACCCCATGGTTGGGACTCTTGCTGCTGAGATGTTCCTaGATGGTCTTATACTCCAGTGTGGCGGCCTGGTCCTCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: TRFTPWLGLLLLRCS*MVLYSSVAAWSSSA
Trigger: GGCGCTGGAGGACCAGGCCGCCACACTGGAGTATAAGACCATCAAGGAACATCTCAGCAGCAAGAGTCCCAACCATGGGGTGAACCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CAA 72 bp TGGTGCTGGTCTGCTTTAATGAGCATCTTGGCCGTGTaGCCGGGAGTGGCGAGCTTGCCGTTGTGCATGAGT +
Preference number: 6 (lower is better)
Translates to: WCWSALMSILAV*PGVASLPLCMS
Trigger: ACTCATGCACAACGGCAAGCTCGCCACTCCCGGCAACACGGCCAAGATGCTCATTAAAGCAGACCAGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS TCA 72 bp CAGTCCAGCATTCCTCCCCTAGACTCATACCCCTCTTaGGCCGTCGAATCTGATGTGGTTGTGCTGGGCAAG +
Preference number: 6 (lower is better)
Translates to: QSSIPPLDSYPS*AVESDVVVLGK
Trigger: CTTGCCCAGCACAACCACATCAGATTCGACGGCTCAAGAGGGGTATGAGTCTAGGGGAGGAATGCTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000513137.5
CDS CCA 72 bp GATGTCCAGCCTGTGCCTCTGTGTGGTGTTCCGTCCTaGCTTGTGGCCCACAAACACCGGATACTGTTTTGT +
Preference number: 6 (lower is better)
Translates to: DVQPVPLCGVPS*LVAHKHRILFC
Trigger: ACAAAACAGTATCCGGTGTTTGTGGGCCACAAGCCAGGACGGAACACCACACAGAGGCACAGGCTGGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503962.1
ENST00000509665.1
ENST00000510263.5
ENST00000515009.5
CDS CCA 72 bp ACCCCTCTTGAGCCGTCGAATCTGATGTGGTTGTGCTaGGCAAGAGGGAACTGGAATGCCCATTCAGTGCCA +
Preference number: 6 (lower is better)
Translates to: TPLEPSNLMWLC*ARGNWNAHSVP
Trigger: TGGCACTGAATGGGCATTCCAGTTCCCTCTTGCCCAGCACAACCACATCAGATTCGACGGCTCAAGAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
CDS CAA 90 bp TTGGTAAGGCGGTATCTGACCATTGTTCTCAGGAACCATGGCCTGTaGAAGATGGAGGGCACTGCCTCATCCATGAGCGGGTGCGTCTTG +
Preference number: 6 (lower is better)
Translates to: LVRRYLTIVLRNHGL*KMEGTASSMSGCVL
Trigger: CAAGACGCACCCGCTCATGGATGAGGCAGTGCCCTCCATCTTCAACAGGCCATGGTTCCTGAGAACAATGGTCAGATACCGCCTTACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000510263.5
ENST00000514316.1
CDS TCA 72 bp TCCCCTAGACTCATACCCCTCTTGAGCCGTCGAATCTaGTGTGGTTGTGCTGGGCAAGAGGGAACTGGAATG +
Preference number: 6 (lower is better)
Translates to: SPRLIPLLSRRI*CGCAGQEGTGM
Trigger: CATTCCAGTTCCCTCTTGCCCAGCACAACCACATCAGATTCGACGGCTCAAGAGGGGTATGAGTCTAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000513137.5
CDS GCA 72 bp TCTCAGGAACCATGGCCTGTTGAAGATGGAGGGCACTaGCTCATCCATGAGCGGGTGCGTCTTGATGAAGTT +
Preference number: 6 (lower is better)
Translates to: SQEPWPVEDGGH*LIHERVRLDEV
Trigger: AACTTCATCAAGACGCACCCGCTCATGGATGAGGCAGTGCCCTCCATCTTCAACAGGCCATGGTTCCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000514316.1
CDS GCA 72 bp CCCAAAGGGTCTGTGCTGTCAGGTGAGTCAAGCAGATaGTTCCAGTCCAGCATTCCTCCCCTAGACTCATAC +
Preference number: 6 (lower is better)
Translates to: PKGSVLSGESSR*FQSSIPPLDSY
Trigger: GTATGAGTCTAGGGGAGGAATGCTGGACTGGAAGCATCTGCTTGACTCACCTGACAGCACAGACCCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000513137.5
CDS GCA 72 bp GGTGATTATGGGAAGACACTGCCCCCAAAGGGTCTGTaGTGTCAGGTGAGTCAAGCAGATGCTTCCAGTCCA +
Preference number: 6 (lower is better)
Translates to: GDYGKTLPPKGL*CQVSQADASSP
Trigger: TGGACTGGAAGCATCTGCTTGACTCACCTGACAGCACAGACCCTTTGGGGGCAGTGTCTTCCCATAATCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000513137.5
CDS CCA 72 bp ACCCCTCTTGAGCCGTCGAATCTGATGTGGTTGTGCTaGGCAAGAGGGAACTGGAATGCCCATACACTGTGT +
Preference number: 6 (lower is better)
Translates to: TPLEPSNLMWLC*ARGNWNAHTLC
Trigger: ACACAGTGTATGGGCATTCCAGTTCCCTCTTGCCCAGCACAACCACATCAGATTCGACGGCTCAAGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257414.12
CDS CCA 72 bp CCCCCTGGGATTATGTACACGCATCATTGGGCTTCATaGATGTGGAAAGGGGAGCAAAGGATGGTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: PPGIMYTHHWAS*MWKGEQRMVWG
Trigger: CCCCCAAACCATCCTTTGCTCCCCTTTCCACATCCATGAAGCCCAATGATGCGTGTACATAATCCCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000513137.5
ENST00000515129.5
CDS CCA 72 bp AGCCTGTGCCTCTGTGTGGTGTTCCGTCCTGGCTTGTaGCCCACAAACACCGGATACTGTTTTGTATCATGC +
Preference number: 6 (lower is better)
Translates to: SLCLCVVFRPGL*PTNTGYCFVSC
Trigger: GCATGATACAAAACAGTATCCGGTGTTTGTGGGCCACAAGCCAGGACGGAACACCACACAGAGGCACAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503962.1
CDS CCA 72 bp TTAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTaGGGTGTGTTCAGCAGAAAGCCCATTGAACTTGTA +
Preference number: 6 (lower is better)
Translates to: LVVVVVVVVVVV*GVFSRKPIELV
Trigger: TACAAGTTCAATGGGCTTTCTGCTGAACACACCCCACACCACCACCACCACCACCACCACCACCACCACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CAA 72 bp TCCAGCCTGTGCCTCTGTGTGGTGTTCCGTCCTGGCTaGTGGCCCACAAACACCGGATACTGTTTTGTATCA +
Preference number: 6 (lower is better)
Translates to: SSLCLCVVFRPG*WPTNTGYCFVS
Trigger: TGATACAAAACAGTATCCGGTGTTTGTGGGCCACAAGCCAGGACGGAACACCACACAGAGGCACAGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503962.1
CDS CAA 90 bp AGGCTGTCCAGGTTCTCCACAAGGTTCACCCCATGGTTGGGACTCTaGCTGCTGAGATGTTCCTTGATGGTCTTATACTCCAGTGTGGCG +
Preference number: 6 (lower is better)
Translates to: RLSRFSTRFTPWLGL*LLRCSLMVLYSSVA
Trigger: CGCCACACTGGAGTATAAGACCATCAAGGAACATCTCAGCAGCAAGAGTCCCAACCATGGGGTGAACCTTGTGGAGAACCTGGACAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CAA 90 bp ATCTGGATGTCCAGCCTGTGCCTCTGTGTGGTGTTCCGTCCTGGCTaGTGGCCCACAAACACCGGATACTGTTTTGTATCATGCCACCAT +
Preference number: 6 (lower is better)
Translates to: IWMSSLCLCVVFRPG*WPTNTGYCFVSCHH
Trigger: ATGGTGGCATGATACAAAACAGTATCCGGTGTTTGTGGGCCACAAGCCAGGACGGAACACCACACAGAGGCACAGGCTGGACATCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503962.1
CDS GCA 72 bp TTTGGGGGAAATAGTCGCGGCGACTACTTTCTGGGATaGAAACGCGATGTGTTCATCTCCAATGACGAGCGG +
Preference number: 6 (lower is better)
Translates to: FGGNSRGDYFLG*KRDVFISNDER
Trigger: CCGCTCGTCATTGGAGATGAACACATCGCGTTTGCATCCCAGAAAGTAGTCGCCGCGACTATTTCCCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS CCA 72 bp ATTCCACTTGGATTCCACTTCGGTGAGTCCCCTTGGTaGTGTCTGCGCCGATTAACAAGTCATTTCAGGGCG +
Preference number: 6 (lower is better)
Translates to: IPLGFHFGESPW*CLRRLTSHFRA
Trigger: CGCCCTGAAATGACTTGTTAATCGGCGCAGACACCACCAAGGGGACTCACCGAAGTGGAATCCAAGTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS CCA 72 bp GAAAGTGTCCACTCTGGGAATCCCATTTGTGACCGATaGGGCAGGTTTCTGGTAGTGGGTAAGTCTTGTCCC +
Preference number: 6 (lower is better)
Translates to: ESVHSGNPICDR*GRFLVVGKSCP
Trigger: GGGACAAGACTTACCCACTACCAGAAACCTGCCCCATCGGTCACAAATGGGATTCCCAGAGTGGACACTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CCA 72 bp ACCCCTCTTGAGCCGTCGAATCTGATGTGGTTGTGCTaGGCAAGAGGGAACTGGAATGCCCTGTTTTCATCA +
Preference number: 6 (lower is better)
Translates to: TPLEPSNLMWLC*ARGNWNALFSS
Trigger: TGATGAAAACAGGGCATTCCAGTTCCCTCTTGCCCAGCACAACCACATCAGATTCGACGGCTCAAGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CAA 90 bp TCTCCTTCGCAAGCCTTTGTCATTCCTACATGTGTGCTTGTCTCTTaGGGGGAAATAGTCGCGGCGACTACTTTCTGGGATGCAAACGCG +
Preference number: 6 (lower is better)
Translates to: SPSQAFVIPTCVLVS*GEIVAATTFWDANA
Trigger: CGCGTTTGCATCCCAGAAAGTAGTCGCCGCGACTATTTCCCCCAAAGAGACAAGCACACATGTAGGAATGACAAAGGCTTGCGAAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS TCA 72 bp ACAGAGAGCTGCTTGCTCTGTCCAGCTGCATGCCCATaGTCCTTTTGTCTTCGACTCCATCATAGCTGCATC +
Preference number: 6 (lower is better)
Translates to: TESCLLCPAACP*SFCLRLHHSCI
Trigger: GATGCAGCTATGATGGAGTCGAAGACAAAAGGATCATGGGCATGCAGCTGGACAGAGCAAGCAGCTCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506114.1
CDS CCA 72 bp TTTACCATCAGCTTGGTGAAGAAAGAGACATTGTCCTaGGGAGCCCGAGTCATGGGAACTCAGTCCACACAG +
Preference number: 6 (lower is better)
Translates to: FTISLVKKETLS*GARVMGTQSTQ
Trigger: CTGTGTGGACTGAGTTCCCATGACTCGGGCTCCCCAGGACAATGTCTCTTTCTTCACCAAGCTGATGGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510263.5
CDS TCA 72 bp ACAGAGAGCTGCTTGCTCTGTCCAGCTGCATGCCCATaGTCCTTTTGTCTTCGACTCCATCATAGCTGCATT +
Preference number: 6 (lower is better)
Translates to: TESCLLCPAACP*SFCLRLHHSCI
Trigger: AATGCAGCTATGATGGAGTCGAAGACAAAAGGATCATGGGCATGCAGCTGGACAGAGCAAGCAGCTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000510263.5
ENST00000515129.5
CDS TCA 72 bp TCTCCAAATCCAAATTCCACTTGGATTCCACTTCGGTaGGTCCCCTTGGTGGTGTCTGCGCCGATTAACAAG +
Preference number: 6 (lower is better)
Translates to: SPNPNSTWIPLR*VPLVVSAPINK
Trigger: CTTGTTAATCGGCGCAGACACCACCAAGGGGACTCACCGAAGTGGAATCCAAGTGGAATTTGGATTTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS GCA 72 bp AACGCAACATACAGAGAGCTGCTTGCTCTGTCCAGCTaGATGCCCATGATCCTTTTGTCTTCGACTCCATCA +
Preference number: 6 (lower is better)
Translates to: NATYRELLALSS*MPMILLSSTPS
Trigger: TGATGGAGTCGAAGACAAAAGGATCATGGGCATGCAGCTGGACAGAGCAAGCAGCTCTCTGTATGTTGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000515129.5
CDS GCA 72 bp TCCCCCAGACCATCTGTATTGCCACGCTCTATGTCCTaGTCAAAAGTCAGTCTGCTGTTGGGTGATAAATGG +
Preference number: 6 (lower is better)
Translates to: SPRPSVLPRSMS*SKVSLLLGDKW
Trigger: CCATTTATCACCCAACAGCAGACTGACTTTTGAGCAGGACATAGAGCGTGGCAATACAGATGGTCTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000515129.5
CDS GCA 72 bp CAAAGGAATTGTGACAGTCCCCCAGACCATCTGTATTaGCACGCTCTATGTCCTGCTCAAAAGTCAGTCTGC +
Preference number: 6 (lower is better)
Translates to: QRNCDSPPDHLY*HALCPAQKSVC
Trigger: GCAGACTGACTTTTGAGCAGGACATAGAGCGTGGCAATACAGATGGTCTGGGGGACTGTCACAATTCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000515129.5
CDS CCA 72 bp TGCAAACAGTGCAACGTTGGCATGTTTGGCATCATATaGGCATCTGGCCATTCCGCTGAATTCATCCCCGAA +
Preference number: 6 (lower is better)
Translates to: CKQCNVGMFGII*ASGHSAEFIPE
Trigger: TTCGGGGATGAATTCAGCGGAATGGCCAGATGCCCATATGATGCCAAACATGCCAACGTTGCACTGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000502996.5
ENST00000503962.1
ENST00000510263.5
CDS CCA 72 bp CAAATTCCACTTGGATTCCACTTCGGTGAGTCCCCTTaGTGGTGTCTGCGCCGATTAACAAGTCATTTCAGG +
Preference number: 6 (lower is better)
Translates to: QIPLGFHFGESP*WCLRRLTSHFR
Trigger: CCTGAAATGACTTGTTAATCGGCGCAGACACCACCAAGGGGACTCACCGAAGTGGAATCCAAGTGGAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS CAA 72 bp AGGTTCTCCACAAGGTTCACCCCATGGTTGGGACTCTaGCTGCTGAGATGTTCCTTGATGGTCTTATACTCC +
Preference number: 6 (lower is better)
Translates to: RFSTRFTPWLGL*LLRCSLMVLYS
Trigger: GGAGTATAAGACCATCAAGGAACATCTCAGCAGCAAGAGTCCCAACCATGGGGTGAACCTTGTGGAGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS CAA 72 bp CAGATATTTACCATCAGCTTGGTGAAGAAAGAGACATaGTCCTGGGGAGCCCGAGTCATGGGAACTCAGTCC +
Preference number: 6 (lower is better)
Translates to: QIFTISLVKKET*SWGARVMGTQS
Trigger: GGACTGAGTTCCCATGACTCGGGCTCCCCAGGACAATGTCTCTTTCTTCACCAAGCTGATGGTAAATATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510263.5
CDS CAA 90 bp GCTGAGTATAGTTTTCCATCTGCAAACAGTGCAACGTTGGCATGTTaGGCATCATATGGGCATCTGGCCATTCCGCTGAATTCATCCCCG +
Preference number: 6 (lower is better)
Translates to: AEYSFPSANSATLAC*ASYGHLAIPLNSSP
Trigger: CGGGGATGAATTCAGCGGAATGGCCAGATGCCCATATGATGCCAAACATGCCAACGTTGCACTGTTTGCAGATGGAAAACTATACTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000502996.5
ENST00000503962.1
ENST00000510263.5
CDS GCA 72 bp AGACCCAGGGATGCTGTTATAAGGTGTAGAAAACGTTaGCAGGACAACATCACGCCCGTTGATACGAATCAC +
Preference number: 6 (lower is better)
Translates to: RPRDAVIRCRKR*QDNITPVDTNH
Trigger: GTGATTCGTATCAACGGGCGTGATGTTGTCCTGGCAACGTTTTCTACACCTTATAACAGCATCCCTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503402.1
ENST00000510263.5
CDS CCA 72 bp AGTTTCATGTCAAGAAGCCCTGGAACCAAAAATCTCTaGCTATGGAGAAAGCTCAGTTCCCCAACAGGGCCT +
Preference number: 6 (lower is better)
Translates to: SFMSRSPGTKNL*LWRKLSSPTGP
Trigger: AGGCCCTGTTGGGGAACTGAGCTTTCTCCATAGCCAGAGATTTTTGGTTCCAGGGCTTCTTGACATGAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509665.1
CDS CAA 72 bp CAAGCCTTTGTCATTCCTACATGTGTGCTTGTCTCTTaGGGGGAAATAGTCGCGGCGACTACTTTCTGGGAT +
Preference number: 6 (lower is better)
Translates to: QAFVIPTCVLVS*GEIVAATTFWD
Trigger: ATCCCAGAAAGTAGTCGCCGCGACTATTTCCCCCAAAGAGACAAGCACACATGTAGGAATGACAAAGGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257414.12
ENST00000343348.11
CDS CAA 72 bp GGTGTAGAAAACGTTGCCAGGACAACATCACGCCCGTaGATACGAATCACATCTGTAACTGCCTGGAGAATG +
Preference number: 6 (lower is better)
Translates to: GVENVARTTSRP*IRITSVTAWRM
Trigger: CATTCTCCAGGCAGTTACAGATGTGATTCGTATCAACGGGCGTGATGTTGTCCTGGCAACGTTTTCTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000502996.5
ENST00000503402.1
ENST00000510024.5
ENST00000510263.5
CDS TCA 72 bp TTGTCTCCCCTGCCAAAGCTCTGGTTTCTGGAGAGGTaGGAGGAATTGGAGGAGTTAGTGTTGTTTCTTTTG +
Preference number: 6 (lower is better)
Translates to: LSPLPKLWFLER*EELEELVLFLL
Trigger: CAAAAGAAACAACACTAACTCCTCCAATTCCTCTCACCTCTCCAGAAACCAGAGCTTTGGCAGGGGAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503865.1
ENST00000510263.5
ENST00000513137.5
ENST00000515129.5
CDS GCA 72 bp AGTGTGATTCTGATATGGCCCAGCAGCTGTGTCCACTaGAATTTTGGTAAGGCGGTATCTGACCATTGTTCT +
Preference number: 6 (lower is better)
Translates to: SVILIWPSSCVH*NFGKAVSDHCS
Trigger: AGAACAATGGTCAGATACCGCCTTACCAAAATTGCAGTGGACACAGCTGCTGGGCCATATCAGAATCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000510263.5
ENST00000514316.1
CDS GCA 72 bp GCTCAAAAGTCAGTCTGCTGTTGGGTGATAAATGGCTaGAGGCACCACCTTCCTTTATCCATCCACAATATG +
Preference number: 6 (lower is better)
Translates to: AQKSVCCWVING*RHHLPLSIHNM
Trigger: CATATTGTGGATGGATAAAGGAAGGTGGTGCCTGCAGCCATTTATCACCCAACAGCAGACTGACTTTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000506114.1
ENST00000510263.5
ENST00000515129.5
CDS CAA 72 bp ACAAAGTATGGTTCTTTCAACCATTTTGAATCGTGCTaGACGGTCCGCAGGGTAGGGCTTTCTCCAAGACTC +
Preference number: 6 (lower is better)
Translates to: TKYGSFNHFESC*TVRRVGLSPRL
Trigger: GAGTCTTGGAGAAAGCCCTACCCTGCGGACCGTCAAGCACGATTCAAAATGGTTGAAAGAACCATACTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000502996.5
ENST00000510024.5
ENST00000510263.5
CDS CAA 72 bp ACTGGTGTCCAGGTGGAATCAGGAGACTTCTGTTCCTaGAATCTCCCAGTAAAAACACTGGCAATGTCAAGC +
Preference number: 6 (lower is better)
Translates to: TGVQVESGDFCS*NLPVKTLAMSS
Trigger: GCTTGACATTGCCAGTGTTTTTACTGGGAGATTCAAGGAACAGAAGTCTCCTGATTCCACCTGGACACCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000503402.1
ENST00000510263.5
CDS TCA 72 bp TTCCCAAGCCCACAACACGCAACCTTAAACTTCTACTaGAATGTTGTCTTTGTCACAGCCGAGACCTTGAAG +
Preference number: 6 (lower is better)
Translates to: FPSPQHATLNFY*NVVFVTAETLK
Trigger: CTTCAAGGTCTCGGCTGTGACAAAGACAACATTTCAGTAGAAGTTTAAGGTTGCGTGTTGTGGGCTTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503865.1
CDS CCA 72 bp CAAGGGCAACTACTGTGCATGTATAATTGGTGCCTTTaGTGGAAAGTAGGGCAGACTCACAACAACTCCAAA +
Preference number: 6 (lower is better)
Translates to: QGQLLCMYNWCL*WKVGQTHNNSK
Trigger: TTTGGAGTTGTTGTGAGTCTGCCCTACTTTCCACCAAAGGCACCAATTATACATGCACAGTAGTTGCCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CAA 72 bp ATGTTCAAGAAACTCTTCTCCAAATCCAAATTCCACTaGGATTCCACTTCGGTGAGTCCCCTTGGTGGTGTC +
Preference number: 6 (lower is better)
Translates to: MFKKLFSKSKFH*DSTSVSPLGGV
Trigger: GACACCACCAAGGGGACTCACCGAAGTGGAATCCAAGTGGAATTTGGATTTGGAGAAGAGTTTCTTGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343348.11
CDS CAA 72 bp CTCTCTTTCTCAGGGCTCAACTCGCTAGTGAACCCTTaGCATGAAGGTGCTCTTTTCTTCCACAGTTTTCTT +
Preference number: 6 (lower is better)
Translates to: LSFSGLNSLVNP*HEGALFFHSFL
Trigger: AAGAAAACTGTGGAAGAAAAGAGCACCTTCATGCAAAGGGTTCACTAGCGAGTTGAGCCCTGAGAAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503962.1
CDS CAA 72 bp TGGTTTCCAAAGGGATCTATTCCCACTGTCTTTTCATaGGAATGGAGGCTTCAACGGCTACACGCTATTACG +
Preference number: 6 (lower is better)
Translates to: WFPKGSIPTVFS*EWRLQRLHAIT
Trigger: CGTAATAGCGTGTAGCCGTTGAAGCCTCCATTCCAATGAAAAGACAGTGGGAATAGATCCCTTTGGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CAA 90 bp TCAAAGGCAAGAAGTAGTGAAGTACAAATGTTTCGGTTTGTGAGGTaGGAAAGGTCCAGAGGCAAAAGCCATGGTGACTTCCTCTTTCCA +
Preference number: 6 (lower is better)
Translates to: SKARSSEVQMFRFVR*ERSRGKSHGDFLFP
Trigger: TGGAAAGAGGAAGTCACCATGGCTTTTGCCTCTGGACCTTTCCAACCTCACAAACCGAAACATTTGTACTTCACTACTTCTTGCCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502996.5
CDS TCA 72 bp CAATATCTAATGATACAGGAATCCCATGGCAGGCTCTaGGGGCTGGAAACTTTGCCTTTAACTGGGTTTACT +
Preference number: 6 (lower is better)
Translates to: QYLMIQESHGRL*GLETLPLTGFT
Trigger: AGTAAACCCAGTTAAAGGCAAAGTTTCCAGCCCTCAGAGCCTGCCATGGGATTCCTGTATCATTAGATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512156.1
CDS TCA 72 bp CCAGGAAGAATTGATGAGGTCAACACAGCTAGGGCATaGTTACCTGTTATAAGGTGTAGAAAACGTTGCCAG +
Preference number: 6 (lower is better)
Translates to: PGRIDEVNTARA*LPVIRCRKRCQ
Trigger: CTGGCAACGTTTTCTACACCTTATAACAGGTAATCATGCCCTAGCTGTGTTGACCTCATCAATTCTTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510024.5
CDS GCA 72 bp TGCTATAGTGACTTCTATGGAGCCACCACACTTAAATaGTGCCACAAAGCTTTGGTAACATTGAAGAGGTCC +
Preference number: 6 (lower is better)
Translates to: CYSDFYGATTLK*CHKALVTLKRS
Trigger: GGACCTCTTCAATGTTACCAAAGCTTTGTGGCAGCATTTAAGTGTGGTGGCTCCATAGAAGTCACTATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS GCA 72 bp AAGATACAAGGGCAACTACTGTGCATGTATAATTGGTaGCTTTGGTGGAAAGTAGGGCAGACTCACAACAAC +
Preference number: 6 (lower is better)
Translates to: KIQGQLLCMYNW*LWWKVGQTHNN
Trigger: GTTGTTGTGAGTCTGCCCTACTTTCCACCAAAGGCACCAATTATACATGCACAGTAGTTGCCCTTGTATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS GCA 72 bp TCTGATGTGGTTGTGCTGGGCAAGAGGGAACTGGAATaGCCTGTTTTCATCACAAATACAGTTAGGAAAACA +
Preference number: 6 (lower is better)
Translates to: SDVVVLGKRELE*PVFITNTVRKT
Trigger: TGTTTTCCTAACTGTATTTGTGATGAAAACAGGGCATTCCAGTTCCCTCTTGCCCAGCACAACCACATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS TCA 72 bp TTCAGCAGAAAGCCCATTGAACTTGTAGTTAGAAAATaGAGGGCCAGATCCTATCTCTCATACTTGCTGGGT +
Preference number: 6 (lower is better)
Translates to: FSRKPIELVVRK*RARSYLSYLLG
Trigger: ACCCAGCAAGTATGAGAGATAGGATCTGGCCCTTCATTTTCTAACTACAAGTTCAATGGGCTTTCTGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS GCA 72 bp TATAGTGACTTCTATGGAGCCACCACACTTAAATGCTaGCACAAAGCTTTGGTAACATTGAAGAGGTCCCTT +
Preference number: 6 (lower is better)
Translates to: YSDFYGATTLKC*HKALVTLKRSL
Trigger: AAGGGACCTCTTCAATGTTACCAAAGCTTTGTGGCAGCATTTAAGTGTGGTGGCTCCATAGAAGTCACTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS TCA 72 bp GTGACTTCCTCTTTCCAAGAAGTGAAAACTAACCCTTaGAGCAGTCATCAAATCTTAGACTTCACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: VTSSFQEVKTNP*SSHQILDFTAA
Trigger: TGCTGCTGTGAAGTCTAAGATTTGATGACTGCTTCAAGGGTTAGTTTTCACTTCTTGGAAAGAGGAAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502996.5
CDS CCA 72 bp CTAATGTTAACAATATCTAATGATACAGGAATCCCATaGCAGGCTCTGAGGGCTGGAAACTTTGCCTTTAAC +
Preference number: 6 (lower is better)
Translates to: LMLTISNDTGIP*QALRAGNFAFN
Trigger: GTTAAAGGCAAAGTTTCCAGCCCTCAGAGCCTGCCATGGGATTCCTGTATCATTAGATATTGTTAACATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512156.1
CDS CCA 72 bp AACATTGAAGAGGTCCCTTTCTGTATGGCACTTGTTTaGCTCTCACACAAGTGGGAAACATTCAATTTGTTG +
Preference number: 6 (lower is better)
Translates to: NIEEVPFCMALV*LSHKWETFNLL
Trigger: CAACAAATTGAATGTTTCCCACTTGTGTGAGAGCCAAACAAGTGCCATACAGAAAGGGACCTCTTCAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CAA 72 bp TTGGTAACATTGAAGAGGTCCCTTTCTGTATGGCACTaGTTTGGCTCTCACACAAGTGGGAAACATTCAATT +
Preference number: 6 (lower is better)
Translates to: LVTLKRSLSVWH*FGSHTSGKHSI
Trigger: AATTGAATGTTTCCCACTTGTGTGAGAGCCAAACAAGTGCCATACAGAAAGGGACCTCTTCAATGTTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CAA 90 bp GCTTTTCTCAGAAATGTTGATCTAATCTTCTTTAAGTACCATTTTTaGAAGGATCTGTCAGCATGTGCCCAGTGGACATCTCTGCACCCT +
Preference number: 6 (lower is better)
Translates to: AFLRNVDLIFFKYHF*KDLSACAQWTSLHP
Trigger: AGGGTGCAGAGATGTCCACTGGGCACATGCTGACAGATCCTTCAAAAAATGGTACTTAAAGAAGATTAGATCAACATTTCTGAGAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512156.1
CDS TCA 72 bp TATTCTGGCCAAAAACTTCAAGATGATTCCCTTCTCTaGTCCCAGAAAAACCACAGTGTGATTCTGATATGG +
Preference number: 6 (lower is better)
Translates to: YSGQKLQDDSLL*SQKNHSVILIW
Trigger: CCATATCAGAATCACACTGTGGTTTTTCTGGGATCAGAGAAGGGAATCATCTTGAAGTTTTTGGCCAGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257414.12
ENST00000343348.11
ENST00000510263.5
ENST00000514316.1
CDS TCA 72 bp TCTGACACCATTTCTCCACCTTTTGGTTCTGAACATTaGAACCATGTCTGTGAAATAATACTCCAAAAGTGC +
Preference number: 6 (lower is better)
Translates to: SDTISPPFGSEH*NHVCEIILQKC
Trigger: GCACTTTTGGAGTATTATTTCACAGACATGGTTTCAATGTTCAGAACCAAAAGGTGGAGAAATGGTGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512156.1
CDS CCA 72 bp GCAGAAATAAAATATGACCTCCTCGTGATTTTCAAGTaGAGTTATTGGCTTACACAGAACAACCTCTTGAAC +
Preference number: 6 (lower is better)
Translates to: AEIKYDLLVIFK*SYWLTQNNLLN
Trigger: GTTCAAGAGGTTGTTCTGTGTAAGCCAATAACTCCACTTGAAAATCACGAGGAGGTCATATTTTATTTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513137.5
CDS CAA 72 bp AGAAATGTTGATCTAATCTTCTTTAAGTACCATTTTTaGAAGGATCTGTCAGCATGTGCCCAGTGGACATCT +
Preference number: 6 (lower is better)
Translates to: RNVDLIFFKYHF*KDLSACAQWTS
Trigger: AGATGTCCACTGGGCACATGCTGACAGATCCTTCAAAAAATGGTACTTAAAGAAGATTAGATCAACATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512156.1
CDS CAA 90 bp AATTATAAGCCTGGATTTATATTTCTAAGTGTCACAATTTTTGATTaGTCTCTCTTTCTCAGGGCTCAACTCGCTAGTGAACCCTTTGCA +
Preference number: 6 (lower is better)
Translates to: NYKPGFIFLSVTIFD*SLFLRAQLASEPFA
Trigger: TGCAAAGGGTTCACTAGCGAGTTGAGCCCTGAGAAAGAGAGACAAATCAAAAATTGTGACACTTAGAAATATAAATCCAGGCTTATAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503962.1