RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEMA5A (Homo sapiens)

Ensembl gene IDs: ENSG00000112902

Ensembl transcript IDs: ENST00000382496.10, ENST00000509486.2, ENST00000513968.4, ENST00000514923.4, ENST00000652226.1

Found 730 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACATGCTTCCCCAAGTGCATCAGGAAGTGATGAAGAAGTTAGGATaGACAAATGGGCTAGGCAAGGCCAAGGCCATCTGTAAACTCCAG +
Preference number: 1 (lower is better)
Translates to: NMLPQVHQEVMKKLG*TNGLGKAKAICKLQ
Trigger: CTGGAGTTTACAGATGGCCTTGGCCTTGCCTAGCCCATTTGTTCATCCTAACTTCTTCATCACTTCCTGATGCACTTGGGGAAGCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR GCA 90 bp TGGCAGCTAGAGATGGTAAGAAGGGGGTTGGTAGGAAAGTGTGACTaGACACTCAGCAGTGCTGAGGATAGATCTTCAGAATGCTTTTTC +
Preference number: 1 (lower is better)
Translates to: WQLEMVRRGLVGKCD*TLSSAEDRSSECFF
Trigger: GAAAAAGCATTCTGAAGATCTATCCTCAGCACTGCTGAGTGTGCAGTCACACTTTCCTACCAACCCCCTTCTTACCATCTCTAGCTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR TCA 90 bp TTTAAAGACGTGTATTTTTGGCAGCAATGGGACACTCTGGTGGCTTaGAATGCACTTGAAATGTATCCAAACTTCGACTCTGAAGCCTCA +
Preference number: 1 (lower is better)
Translates to: FKDVYFWQQWDTLVA*NALEMYPNFDSEAS
Trigger: TGAGGCTTCAGAGTCGAAGTTTGGATACATTTCAAGTGCATTTCAAGCCACCAGAGTGTCCCATTGCTGCCAAAAATACACGTCTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR TCA 90 bp TTTGAGACAGCTTTCACTAGGAAGTATACATTTTGTGCCAGGCTCTaGATTGGTTTTGATAATGCCCTATGTCGCTTGCAATGTGAACTC +
Preference number: 1 (lower is better)
Translates to: FETAFTRKYTFCARL*IGFDNALCRLQCEL
Trigger: GAGTTCACATTGCAAGCGACATAGGGCATTATCAAAACCAATTCAGAGCCTGGCACAAAATGTATACTTCCTAGTGAAAGCTGTCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CCA 90 bp TTGCTTTTAAAGACGTGTATTTTTGGCAGCAATGGGACACTCTGGTaGCTTGAAATGCACTTGAAATGTATCCAAACTTCGACTCTGAAG +
Preference number: 1 (lower is better)
Translates to: LLLKTCIFGSNGTLW*LEMHLKCIQTSTLK
Trigger: CTTCAGAGTCGAAGTTTGGATACATTTCAAGTGCATTTCAAGCCACCAGAGTGTCCCATTGCTGCCAAAAATACACGTCTTTAAAAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR CCA 90 bp TTGTTGCTTTTAAAGACGTGTATTTTTGGCAGCAATGGGACACTCTaGTGGCTTGAAATGCACTTGAAATGTATCCAAACTTCGACTCTG +
Preference number: 1 (lower is better)
Translates to: LLLLKTCIFGSNGTL*WLEMHLKCIQTSTL
Trigger: CAGAGTCGAAGTTTGGATACATTTCAAGTGCATTTCAAGCCACCAGAGTGTCCCATTGCTGCCAAAAATACACGTCTTTAAAAGCAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR CCA 90 bp GATAATGCCCTATGTCGCTTGCAATGTGAACTCTATTTTCAAAAGTaGATAGGATTCCCTTCCTCATGCTTCTGTAACATGTATCAAATT +
Preference number: 1 (lower is better)
Translates to: DNALCRLQCELYFQK*IGFPSSCFCNMYQI
Trigger: AATTTGATACATGTTACAGAAGCATGAGGAAGGGAATCCTATCCACTTTTGAAAATAGAGTTCACATTGCAAGCGACATAGGGCATTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR TCA 90 bp GACCAGCTTCGATGCCATTTAGAAACCATTTCCCATCAATTCCAGTaGAACATTCTTGAAATATTAGAATCCTCTTTACCAGGGAAAATA +
Preference number: 1 (lower is better)
Translates to: DQLRCHLETISHQFQ*NILEILESSLPGKI
Trigger: TATTTTCCCTGGTAAAGAGGATTCTAATATTTCAAGAATGTTTCACTGGAATTGATGGGAAATGGTTTCTAAATGGCATCGAAGCTGGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGAAACATGGGCAGTCATaGGGCACAGGCCTTGAGGAA +
Preference number: 2 (lower is better)
Translates to: PAEEQLENHPARFPLLSMKHGQS*GTGLEE
Trigger: TTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTT...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTCCGGTGTGGACCAGGTaGAATTCCTGGGCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: QDFITCSEASDELFQSCSPVWTR*NSWASQ
Trigger: CTGGGAAGCCCAGGAATTCCACCTGGTCCACACCGG...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGCATCAGGAGCAAGGTaGGGTGCCTCACAGTCTACT +
Preference number: 2 (lower is better)
Translates to: SERQHEVPTAKTLNVINPASGAR*GASQST
Trigger: AGTAGACTGTGAGGCACCCCACCTTGCTCCTGATGC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CCA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCAAAGCTACATGTCCCTaGAGCTACAGGAAGCCCACA +
Preference number: 2 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATKATCP*SYRKPT
Trigger: TGTGGGCTTCCTGTAGCTCCAGGGACATGTAGCTTT...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTAGAGGTGAGGGTGAATaGACTGGGTGGGTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: QDFITCSEASDELFQSCSRGEGE*TGWVGR
Trigger: CCTTCCCACCCACCCAGTCCATTCACCCTCACCTCT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR TCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGCTTCCCAGGCAAGATaGAAACACTCAAGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: SERQHEVPTAKTLNVINPASQAR*KHSSCF
Trigger: GAAGCAGCTTGAGTGTTTTCATCTTGCCTGGGAAGC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTGCTCGTGGTAGGGGCTaGTTGCCACACATTGGGTAT +
Preference number: 2 (lower is better)
Translates to: QDFITCSEASDELFQSCSARGRG*LPHIGY
Trigger: ATACCCAATGTGTGGCAATCAGCCCCTACCACGAGC...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR TCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCCCACTGCAAAGACCCTaGATGTCATTAATCCAAAAT +
Preference number: 2 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSPLQRP*MSLIQN
Trigger: ATTTTGGATTAATGACATTCAGGGTCTTTGCAGTGG...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR TCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGCTGGTCTCAAACTCCTaGGCTCAGGTGATCCGCCCA +
Preference number: 2 (lower is better)
Translates to: MVMQSLLILSTISTCCLWLVSNS*AQVIRP
Trigger: TGGGCGGATCACCTGAGCTCAGGAGTTTGAGACCAG...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR TCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCATGGGGCACAGGCCTTaGGGAACTGGGGATTTACAA +
Preference number: 2 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTMGHRP*GTGDLQ
Trigger: TTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCAT...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR TCA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCATCCAAACTTCGACTCTaGAGCCTCAGAAACATGGGC +
Preference number: 2 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPSKLRL*SLRNMG
Trigger: GCCCATGTTTCTGAGGCTTCAGAGTCGAAGTTTGGA...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR GCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGAGGAGCAAGGTGGGGTaGCTCACAGTCTACTGTAAC +
Preference number: 2 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMRSKVG*LTVYCN
Trigger: GTTACAGTAGACTGTGAGGCACCCCACCTTGCTCCT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTAAACATGGGCAGTCATaGGGCACAGGCCTTGAGGAA +
Preference number: 2 (lower is better)
Translates to: QDFITCSEASDELFQSCSKHGQS*GTGLEE
Trigger: TTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAACCGGTGTGGACCAGGTaGAATTCCTGGGCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLEPVWTR*NSWASQ
Trigger: CTGGGAAGCCCAGGAATTCCACCTGGTCCACACCGG...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGAGAGGTGAGGGTGAATaGACTGGGTGGGTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: KFKISNCLQAYQGLKLALRGEGE*TGWVGR
Trigger: CCTTCCCACCCACCCAGTCCATTCACCCTCACCTCT...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CCA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCATGTTGTACCTATTCTaGTTCTACATCCCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATMLYLF*FYIPSE
Trigger: CTCACTGGGGATGTAGAACCAGAATAGGTACAACAT...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCATGGGGCACAGGCCTTaGGGAACTGGGGATTTACAA +
Preference number: 2 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAMGHRP*GTGDLQ
Trigger: TTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCAT...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR TCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCCTTATCGATGATCAGTaGAGAGACCACAGGGATCCC +
Preference number: 2 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTLIDDQ*RDHRDP
Trigger: GGGATCCCTGTGGTCTCTTCACTGATCATCGATAAG...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTTCCAGGGACCTCTGTaGATGGTGTTAGCACACTCT +
Preference number: 2 (lower is better)
Translates to: QDFITCSEASDELFQSCSFQGPL*MVLAHS
Trigger: AGAGTGTGCTAACACCATTCACAGAGGTCCCTGGAA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR GCA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCAAGTTTTGCAGCAACCTaGAGAACACATCCACGCTTC +
Preference number: 2 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPSFAAT*RTHPRF
Trigger: GAAGCGTGGATGTGTTCTGCAGGTTGCTGCAAAACT...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGCATGGACCTGTGAAGTaGGCAACCGTTTCCGGGAAC +
Preference number: 2 (lower is better)
Translates to: KFKISNCLQAYQGLKLALHGPVK*ATVSGN
Trigger: GTTCCCGGAAACGGTTGCCCACTTCACAGGTCCATG...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCTCCAAACTTCGACTCTaGAGCCTCAGAAACATGGGC +
Preference number: 2 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLASKLRL*SLRNMG
Trigger: GCCCATGTTTCTGAGGCTTCAGAGTCGAAGTTTGGA...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR GCA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCAACCATTAGTACCTGTTaGCTCTGGTTCTGTGTTCCA +
Preference number: 2 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPTISTC*LWFCVP
Trigger: TGGAACACAGAACCAGAGGCAACAGGTACTAATGGT...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCCAGGCCTTGAGGAACTaGGGATTTACAAGAAGCCAA +
Preference number: 2 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTQALRN*GFTRSQ
Trigger: TTGGCTTCTTGTAAATCCCCAGTTCCTCAAGGCCTG...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGTCCTTCCAATGTGGGTaGCACATTTATAAAATAATG +
Preference number: 2 (lower is better)
Translates to: PAEEQLENHPARFPLLSMSFQCG*HIYKIM
Trigger: CATTATTTTATAAATGTGCCACCCACATTGGAAGGA...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCGCATCAGGAGCAAGGTaGGGTGCCTCACAGTCTACT +
Preference number: 2 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTASGAR*GASQST
Trigger: AGTAGACTGTGAGGCACCCCACCTTGCTCCTGATGC...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CAA 90 bp CTGCCATTGCGCCAACACTGTAAAACATGTTTGCTTGAGCAAGAATaGATATTGACTCCGATTGCAGGGAGTAAGCTTGATTGCCTTTCT +
Preference number: 2 (lower is better)
Translates to: LPLRQHCKTCLLEQE*ILTPIAGSKLDCLS
Trigger: AGAAAGGCAATCAAGCTTACTCCCTGCAATCGGAGTCAATATCAATTCTTGCTCAAGCAAACATGTTTTACAGTGTTGGCGCAATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR TCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCCTCAGAGGCATCAGATaGACTTTTTCAGTCGTGTTC +
Preference number: 2 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTLRGIR*TFSVVF
Trigger: GAACACGACTGAAAAAGTTCATCTGATGCCTCTGAG...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR TCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGTCATCCCAAACCACATaGCATGAACGGACTCTTCCT +
Preference number: 2 (lower is better)
Translates to: MVMQSLLILSTISTCCLWSSQTT*HERTLP
Trigger: AGGAAGAGTCCGTTCATGTCATGTGGTTTGGGATGA...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCGTGGTAGGGGCTGATTaGCACACATTGGGTATATCA +
Preference number: 2 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETVVGAD*HTLGIS
Trigger: TGATATACCCAATGTGTGGCAATCAGCCCCTACCAC...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCAGCAATGGGACACTCTaGTGGCTTGAAATGCACTTG +
Preference number: 2 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETSNGTL*WLEMHL
Trigger: CAAGTGCATTTCAAGCCACCAGAGTGTCCCATTGCT...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR CAA 90 bp TTGCGCCAACACTGTAAAACATGTTTGCTTGAGCAAGAATTGATATaGACTCCGATTGCAGGGAGTAAGCTTGATTGCCTTTCTATGGCA +
Preference number: 2 (lower is better)
Translates to: LRQHCKTCLLEQELI*TPIAGSKLDCLSMA
Trigger: TGCCATAGAAAGGCAATCAAGCTTACTCCCTGCAATCGGAGTCAATATCAATTCTTGCTCAAGCAAACATGTTTTACAGTGTTGGCGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CAA 90 bp TCAGTGGTGAAACTAAGTGCTTGGGTTAAAGATTCATACTGTGCTTaGTTTCAAAGTGCAGAGGTTCAGCTTGCTTTTGGCCAACAGTCA +
Preference number: 2 (lower is better)
Translates to: SVVKLSAWVKDSYCA*FQSAEVQLAFGQQS
Trigger: TGACTGTTGGCCAAAAGCAAGCTGAACCTCTGCACTTTGAAACAAAGCACAGTATGAATCTTTAACCCAAGCACTTAGTTTCACCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTGACACTCTGGTGGCTTaGAATGCACTTGAAATGTAT +
Preference number: 2 (lower is better)
Translates to: QDFITCSEASDELFQSCSDTLVA*NALEMY
Trigger: ATACATTTCAAGTGCATTTCAAGCCACCAGAGTGTC...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGTTGGGCAATCCATGGTaGATAATTGTTTGGCCACAT +
Preference number: 2 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMLGNPW*IIVWPH
Trigger: ATGTGGCCAAACAATTATTCACCATGGATTGCCCAA...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR TCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAAGCTTCCCAGGCAAGATaGAAACACTCAAGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLEASQAR*KHSSCF
Trigger: GAAGCAGCTTGAGTGTTTTCATCTTGCCTGGGAAGC...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR TCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCTTCCAGGGACCTCTGTaGATGGTGTTAGCACACTCT +
Preference number: 2 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTFQGPL*MVLAHS
Trigger: AGAGTGTGCTAACACCATTCACAGAGGTCCCTGGAA...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTAATGGGACACTCTGGTaGCTTGAAATGCACTTGAAA +
Preference number: 2 (lower is better)
Translates to: QDFITCSEASDELFQSCSNGTLW*LEMHLK
Trigger: TTTCAAGTGCATTTCAAGCCACCAGAGTGTCCCATT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGAGGCACGCACCACGATaGCTGGCTAATATTTTGTAT +
Preference number: 2 (lower is better)
Translates to: MVMQSLLILSTISTCCLWRHAPR*LANILY
Trigger: ATACAAAATATTAGCCAGCCATCGTGGTGCGTGCCT...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCGTTAGGATGAACAAATaGGCTAGGCAAGGCCAAGGC +
Preference number: 2 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTVRMNK*ARQGQG
Trigger: GCCTTGGCCTTGCCTAGCCCATTTGTTCATCCTAAC...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGGCTTGAAATGCACTTaGAATGTATCCAAACTTCGA +
Preference number: 2 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMGLKCT*NVSKLR
Trigger: TCGAAGTTTGGATACATTTCAAGTGCATTTCAAGCC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCGACACTCTGGTGGCTTaGAATGCACTTGAAATGTAT +
Preference number: 2 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLADTLVA*NALEMY
Trigger: ATACATTTCAAGTGCATTTCAAGCCACCAGAGTGTC...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTTAAATGCTTATCGATaGTCAGTGAAGAGACCACAG +
Preference number: 2 (lower is better)
Translates to: QDFITCSEASDELFQSCSLNAYR*SVKRPQ
Trigger: CTGTGGTCTCTTCACTGATCATCGATAAGCATTTAA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR TCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGCTCAGAGGCATCAGATaGACTTTTTCAGTCGTGTTC +
Preference number: 2 (lower is better)
Translates to: KFKISNCLQAYQGLKLALLRGIR*TFSVVF
Trigger: GAACACGACTGAAAAAGTTCATCTGATGCCTCTGAG...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR GCA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCAACATGTTGTGTAGTGTaGAGAAATTCTGTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPTCCVV*RNSVLL
Trigger: GAGAAGAACAGAATTTCTGCACACTACACAACATGT...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CAA 90 bp AGACAGCTTTCACTAGGAAGTATACATTTTGTGCCAGGCTCTGAATaGGTTTTGATAATGCCCTATGTCGCTTGCAATGTGAACTCTATT +
Preference number: 2 (lower is better)
Translates to: RQLSLGSIHFVPGSE*VLIMPYVACNVNSI
Trigger: AATAGAGTTCACATTGCAAGCGACATAGGGCATTATCAAAACCAATTCAGAGCCTGGCACAAAATGTATACTTCCTAGTGAAAGCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR TCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCCTGACATATGAGGAATaGGTGAGAGGCAACATGAAG +
Preference number: 2 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTLTYEE*VRGNMK
Trigger: CTTCATGTTGCCTCTCACTCATTCCTCATATGTCAG...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR GCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGGGGAGTAAGCTTGATTaGCTTTCTATGGCAGATATG +
Preference number: 2 (lower is better)
Translates to: KFKISNCLQAYQGLKLALGSKLD*LSMADM
Trigger: CATATCTGCCATAGAAAGGCAATCAAGCTTACTCCC...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGCAGGCCTTGAGGAACTaGGGATTTACAAGAAGCCAA +
Preference number: 2 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQQALRN*GFTRSQ
Trigger: TTGGCTTCTTGTAAATCCCCAGTTCCTCAAGGCCTG...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCAGCTTTATCCAGATTTaGAAAGTTGGGCAATCCATG +
Preference number: 2 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETSFIQI*KVGQSM
Trigger: CATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR CAA 90 bp ATTCATACTGTGCTTTGTTTCAAAGTGCAGAGGTTCAGCTTGCTTTaGGCCAACAGTCATGGTAAAAGAGAAAAACAATCAACTTCAGCA +
Preference number: 2 (lower is better)
Translates to: IHTVLCFKVQRFSLL*ANSHGKREKQSTSA
Trigger: TGCTGAAGTTGATTGTTTTTCTCTTTTACCATGACTGTTGGCCAAAAGCAAGCTGAACCTCTGCACTTTGAAACAAAGCACAGTATGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR TCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAATTGGGCAATCCATGGTaGATAATTGTTTGGCCACAT +
Preference number: 2 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLELGNPW*IIVWPH
Trigger: ATGTGGCCAAACAATTATTCACCATGGATTGCCCAA...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR TCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACTGAGTATGGACTTTaGGCATGTGCATATAGACAG +
Preference number: 2 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMTEYGL*ACAYRQ
Trigger: CTGTCTATATGCACATGCTCAAAGTCCATACTCAGT...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCAAAGACGTGTATTTTTaGCAGCAATGGGACACTCTG +
Preference number: 2 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTKDVYF*QQWDTL
Trigger: CAGAGTGTCCCATTGCTGCCAAAAATACACGTCTTT...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGCTGATTGCCACACATTaGGTATATCAGAGAGATGAA +
Preference number: 2 (lower is better)
Translates to: KFKISNCLQAYQGLKLALLIATH*VYQRDE
Trigger: TTCATCTCTCTGATATACCCAATGTGTGGCAATCAG...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CAA 90 bp CTTTCACTAGGAAGTATACATTTTGTGCCAGGCTCTGAATTGGTTTaGATAATGCCCTATGTCGCTTGCAATGTGAACTCTATTTTCAAA +
Preference number: 2 (lower is better)
Translates to: LSLGSIHFVPGSELV*IMPYVACNVNSIFK
Trigger: TTTGAAAATAGAGTTCACATTGCAAGCGACATAGGGCATTATCAAAACCAATTCAGAGCCTGGCACAAAATGTATACTTCCTAGTGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR TCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGAGAAACACAAAAGAGTaGTTTTCTACCTCCTCTTTC +
Preference number: 2 (lower is better)
Translates to: KFKISNCLQAYQGLKLALRNTKE*FSTSSF
Trigger: GAAAGAGGAGGTAGAAAATCACTCTTTTGTGTTTCT...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR GCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCAATATTATGGACCTATaGACTTCTTGTGGAAGGAGC +
Preference number: 2 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTNIMDL*TSCGRS
Trigger: GCTCCTTCCACAAGAAGTGCATAGGTCCATAATATT...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGATCTTACATTGTGCATaGCATTCCCTTTTATGCGTT +
Preference number: 2 (lower is better)
Translates to: KFKISNCLQAYQGLKLALILHCA*HSLLCV
Trigger: AACGCATAAAAGGGAATGCCATGCACAATGTAAGAT...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR TCA 72 bp GTGACCTCCGCCCACCCCTGCTCCAACTTCCATAGTTaGTCCAATGCAGCAGGTAATGAGTTTCCAGTTGCC +
Preference number: 3 (lower is better)
Translates to: VTSAHPCSNFHS*SNAAGNEFPVA
Trigger: GGCAACTGGAAACTCATTACCTGCTGCATTGGATCAACTATGGAAGTTGGAGCAGGGGTGGGCGGAGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CAA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCCATCTTGAAATGCTGTaGCCTCCATGCAGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATHLEML*PPCRER
Trigger: CCTCTCCCTGCATGGAGGCAACAGCATTTCAAGATG...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR TCA 72 bp CTGTTGCCTCTGGTTCTGTGTTCCAGAGCCATCTCTTaGGATAGAAATGCTGAGGTCAATGGAGTTACCCCC +
Preference number: 3 (lower is better)
Translates to: LLPLVLCSRAIS*DRNAEVNGVTP
Trigger: GGGGGTAACTCCATTGACCTCAGCATTTCTATCTCAAGAGATGGCTCTGGAACACAGAACCAGAGGCAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR TCA 72 bp CCCCAAGTGCATCAGGAAGTGATGAAGAAGTTAGGATaGACAAATGGGCTAGGCAAGGCCAAGGCCATCTGT +
Preference number: 3 (lower is better)
Translates to: PQVHQEVMKKLG*TNGLGKAKAIC
Trigger: ACAGATGGCCTTGGCCTTGCCTAGCCCATTTGTTCATCCTAACTTCTTCATCACTTCCTGATGCACTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CAA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGCAGCTTTATCCAGATTaGGAAAGTTGGGCAATCCAT +
Preference number: 3 (lower is better)
Translates to: PAEEQLENHPARFPLLSMQLYPD*ESWAIH
Trigger: ATGGATTGCCCAACTTTCCAAATCTGGATAAAGCTG...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CAA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCCCAGCCGAGGAACAATaGGAGAACCATCCGGCTAGA +
Preference number: 3 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTPAEEQ*ENHPAR
Trigger: TCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR GCA 72 bp CCAGATCTGAAAGTGCCCTTGACTAGTTCCTGCCATTaGGCCAACACTGTAAAACATGTTTGCTTGAGCAAG +
Preference number: 3 (lower is better)
Translates to: PDLKVPLTSSCH*ANTVKHVCLSK
Trigger: CTTGCTCAAGCAAACATGTTTTACAGTGTTGGCGCAATGGCAGGAACTAGTCAAGGGCACTTTCAGATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CAA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCGGACCTATGCACTTCTaGTGGAAGGAGCAGGTCTTT +
Preference number: 3 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTGPMHF*WKEQVF
Trigger: AAAGACCTGCTCCTTCCACAAGAAGTGCATAGGTCC...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CAA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTGGACCTATGCACTTCTaGTGGAAGGAGCAGGTCTTT +
Preference number: 3 (lower is better)
Translates to: QDFITCSEASDELFQSCSGPMHF*WKEQVF
Trigger: AAAGACCTGCTCCTTCCACAAGAAGTGCATAGGTCC...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CAA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCACAGGAAGCCCACATGTaGTGTAGTGTGCAGAAATTC +
Preference number: 3 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPQEAHM*CSVQKF
Trigger: GAATTTCTGCACACTACACAACATGTGGGCTTCCTG...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR GCA 72 bp GAACACGTTTCCGTGTCTACCCAGGACTTTATCACATaGTCAGAGGCATCAGATGAACTTTTTCAGTCGTGT +
Preference number: 3 (lower is better)
Translates to: EHVSVSTQDFIT*SEASDELFQSC
Trigger: ACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR GCA 72 bp CTCTTTCCAGATCTGAAAGTGCCCTTGACTAGTTCCTaGCATTGCGCCAACACTGTAAAACATGTTTGCTTG +
Preference number: 3 (lower is better)
Translates to: LFPDLKVPLTSS*HCANTVKHVCL
Trigger: CAAGCAAACATGTTTTACAGTGTTGGCGCAATGGCAGGAACTAGTCAAGGGCACTTTCAGATCTGGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CAA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAACCAGCCGAGGAACAATaGGAGAACCATCCGGCTAGA +
Preference number: 3 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLEPAEEQ*ENHPAR
Trigger: TCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR TCA 72 bp GTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTaGATGTCATTAATCCAAAATAACTTACAGAGCCCA +
Preference number: 3 (lower is better)
Translates to: VRGNMKSPLQRP*MSLIQNNLQSP
Trigger: TGGGCTCTGTAAGTTATTTTGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR CCA 72 bp ATTTCACCCACTGCCCAAAGAAGTAAGGGGCTCAAATaGCATCTAGGGTCTGATAAGATAAGCGTAGGTAAT +
Preference number: 3 (lower is better)
Translates to: ISPTAQRSKGLK*HLGSDKISVGN
Trigger: ATTACCTACGCTTATCTTATCAGACCCTAGATGCCATTTGAGCCCCTTACTTCTTTGGGCAGTGGGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CCA 72 bp AGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTaGTTCTACATCCCCAGTGAGGGCAAAAATCACATC +
Preference number: 3 (lower is better)
Translates to: SHLSSEHMLYLF*FYIPSEGKNHI
Trigger: GATGTGATTTTTGCCCTCACTGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CAA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCAAATGCCCTATGTCGCTaGCAATGTGAACTCTATTTT +
Preference number: 3 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPNALCR*QCELYF
Trigger: AAAATAGAGTTCACATTGCAAGCGACATAGGGCATT...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR TCA 72 bp GCTTTCACTAGGAAGTATACATTTTGTGCCAGGCTCTaGATTGGTTTTGATAATGCCCTATGTCGCTTGCAA +
Preference number: 3 (lower is better)
Translates to: AFTRKYTFCARL*IGFDNALCRLQ
Trigger: TTGCAAGCGACATAGGGCATTATCAAAACCAATTCAGAGCCTGGCACAAAATGTATACTTCCTAGTGAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR TCA 72 bp GTTTCTAGAAGGCTAATACTGAAGTCACCTCTCTTCTaGGCATATGTTGTACCTATTCTGGTTCTACATCCC +
Preference number: 3 (lower is better)
Translates to: VSRRLILKSPLF*AYVVPILVLHP
Trigger: GGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTCAGTATTAGCCTTCTAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR-3UTR CAA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCTGGCTTGAAATGCACTaGAAATGTATCCAAACTTCG +
Preference number: 3 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAWLEMH*KCIQTS
Trigger: CGAAGTTTGGATACATTTCAAGTGCATTTCAAGCCA...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CAA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCTGGCTTGAAATGCACTaGAAATGTATCCAAACTTCG +
Preference number: 3 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETWLEMH*KCIQTS
Trigger: CGAAGTTTGGATACATTTCAAGTGCATTTCAAGCCA...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR-3UTR CAA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGCACAAGAAAACCCCATaGAAGTGTAAAGGATACCCG +
Preference number: 3 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMHKKTP*KCKGYP
Trigger: CGGGTATCCTTTACACTTCAATGGGGTTTTCTTGTG...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CCA 72 bp CTATGTCGCTTGCAATGTGAACTCTATTTTCAAAAGTaGATAGGATTCCCTTCCTCATGCTTCTGTAACATG +
Preference number: 3 (lower is better)
Translates to: LCRLQCELYFQK*IGFPSSCFCNM
Trigger: CATGTTACAGAAGCATGAGGAAGGGAATCCTATCCACTTTTGAAAATAGAGTTCACATTGCAAGCGACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR TCA 72 bp AACATTGGACCAAAAGTTTGTGCATTTTCTTGCAGATaGTGTAGAATCTCAGTGGTGAAACTAAGTGCTTGG +
Preference number: 3 (lower is better)
Translates to: NIGPKVCAFSCR*CRISVVKLSAW
Trigger: CCAAGCACTTAGTTTCACCACTGAGATTCTACATCATCTGCAAGAAAATGCACAAACTTTTGGTCCAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR TCA 72 bp CGATGCCATTTAGAAACCATTTCCCATCAATTCCAGTaGAACATTCTTGAAATATTAGAATCCTCTTTACCA +
Preference number: 3 (lower is better)
Translates to: RCHLETISHQFQ*NILEILESSLP
Trigger: TGGTAAAGAGGATTCTAATATTTCAAGAATGTTTCACTGGAATTGATGGGAAATGGTTTCTAAATGGCATCG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGCACACCCGGCCCCCGTaGCTGGGAGTGGGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKHTRPP*LGVGLL
Trigger: CAGCAACCCCACTCCCAGGCACGGGGGCCGGGTGTG...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCATGGGGGCACCGGCTTaGGGGCCACGAGCACGGTCC +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSMGAPA*GPRARS
Trigger: GGACCGTGCTCGTGGCCCCCAAGCCGGTGCCCCCAT...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGCACACCCGGCCCCCGTaGCTGGGAGTGGGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMHTRPP*LGVGLL
Trigger: CAGCAACCCCACTCCCAGGCACGGGGGCCGGGTGTG...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGTCCGCGGGGCAGTCCTaGGTGGGAGAAGGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKSAGQS*VGEGSV
Trigger: GACGCTCCCTTCTCCCACCCAGGACTGCCCCGCGGA...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGGGAGGCAGCCGAGGATaGAGCTGCTCAGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKGGSRG*SCSAPR
Trigger: CCGTGGGGCTGAGCAGCTCCATCCTCGGCTGCCTCC...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGCCGCCCCCTACTCGCTaGGTTCCAGAATGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKPPPTR*VPEWGH
Trigger: GTGCCCCCATTCTGGAACTCAGCGAGTAGGGGGCGG...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCTGCGAGGAGCGCTGGTaGCAGTCATCCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSCEERW*QSSSAW
Trigger: CCAGGCGCTGGATGACTGGCACCAGCGCTCCTCGCA...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGGGTCCTGGGCCCCAATaGAGGTGCTGCGTGTGCGGT +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKGPGPQ*RCCVCG
Trigger: ACCGCACACGCAGCACCTGCATTGGGGCCCAGGACC...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGTGGGAGTGGGGTTGCTaGAGGAGCGCTGCCGCACCT +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKWEWGC*RSAAAP
Trigger: AGGTGCGGCAGCGCTCCTGCAGCAACCCCACTCCCA...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGATCCTGCGGCGAGCTTaGATGCCACCCCCGCATTGG +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKILRRA*MPPPHW
Trigger: CCAATGCGGGGGTGGCATTCAAGCTCGCCGCAGGAT...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGGCTTCCGGTTCCGAATaGCCCTGCTGCAGTCACGGC +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKASGSE*PCCSHG
Trigger: GCCGTGACTGCAGCAGGGGCATTCGGAACCGGAAGC...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGCCAAGGGCCGCGGCTaGCCTGAGGCTGCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPAKGRG*PEAAKP
Trigger: GGGCTTCGCAGCCTCAGGCCAGCCGCGGCCCTTGGC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCCAGTCATCCAGCGCCTaGGGGCCAGAGCGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATQSSSA*GPERLR
Trigger: TCGGAGCCGCTCTGGCCCCCAGGCGCTGGATGACTG...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGAGGTGCGAGGAGCGCTaGTGCCAGTCATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMRCEER*CQSSSA
Trigger: GGCGCTGGATGACTGGCACCAGCGCTCCTCGCACCT...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGAACAGGAGGATGCACTaGCGGGCGCGGACTTGGACG +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKNRRMH*RARTWT
Trigger: CGTCCAAGTCCGCGCCCGCCAGTGCATCCTCCTGTT...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCCTGACCAAGCCCCGTTaGCCGTGTGGGCAGAGTATC +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSLTKPR*PCGQSI
Trigger: GATACTCTGCCCACACGGTCAACGGGGCTTGGTCAG...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGCTGCACCACGTCGACTaGCACGTGGGAAAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKLHHVD*HVGKAA
Trigger: AGCCGCTTTTCCCACGTGGCAGTCGACGTGGTGCAG...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGTGGCTGTGCAGGATCTaGAGGCTCCTGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKWLCRI*RLLMGS
Trigger: GGAGCCCATCAGGAGCCTGCAGATCCTGCACAGCCA...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGGGGATCTTGACCACGTaGTCCCGCAGGCCCACGAAC +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMGILTT*SRRPTN
Trigger: GTTCGTGGGCCTGCGGGAGCACGTGGTCAAGATCCC...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGGTTCCCACTGCGTCATaGTCAGGCTCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKVPTAS*SGSPPG
Trigger: GCCTGGAGGAGAGCCTGAGCATGACGCAGTGGGAAC...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGGCTTCCGGTTCCGAATaGCCCTGCTGCAGTCACGGC +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMASGSE*PCCSHG
Trigger: GCCGTGACTGCAGCAGGGGCATTCGGAACCGGAAGC...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGAGCCGAGGATGGAGCTaGTCAGCCCCACGGCGATCA +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMSRGWS*SAPRRS
Trigger: TGATCGCCGTGGGGCTGAGCAGCTCCATCCTCGGCT...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCGGGAGCGTCCCGGGATaGGCGACACTGGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAGSVPG*ATLAGP
Trigger: CGGCCCGGCCAGTGTCGCTCATCCCGGGACGCTCCC...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGTGGCTGTGCAGGATCTaGAGGCTCCTGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMWLCRI*RLLMGS
Trigger: GGAGCCCATCAGGAGCCTGCAGATCCTGCACAGCCA...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGCCTGGGAGTGGGGTTaGTGCAGGAGCGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPAWEWG*CRSAAA
Trigger: TGCGGCAGCGCTCCTGCAGCAACCCCACTCCCAGGC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGTGCTGCAGTCACGGCTaGACTGTGACCACGACGTCC +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMCCSHG*TVTTTS
Trigger: GGACGTCGTGGTCACAGTGCAGCCGTGACTGCAGCA...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGGGTTCCGAATGCCCCTaGTGCAGTCACGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMGSECP*CSHGCT
Trigger: AGTGCAGCCGTGACTGCAGCAGGGGCATTCGGAACC...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTGCCAAGGGCCGCGGCTaGCCTGAGGCTGCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSAKGRG*PEAAKP
Trigger: GGGCTTCGCAGCCTCAGGCCAGCCGCGGCCCTTGGC...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGCGGGATGAGCGACACTaGCCGGGCCGCCCCTGCACG +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMRDERH*PGRPCT
Trigger: CGTGCAGGGGCGGCCCGGCCAGTGTCGCTCATCCCG...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGTCGAGGTGGCAAAGTTaGGTGTCCAAGCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKSRWQS*VSKPAP
Trigger: CGGAGCTGGCTTGGACACCCAACTTTGCCACCTCGA...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGTCCACGGTGCCACACTaGAAGTGGGGGTTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKSTVPH*KWGFGL
Trigger: CAACCCAAACCCCCACTTCCAGTGTGGCACCGTGGA...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGCGTTCCTGGAACAGTTaGCGATCTCCATGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKRSWNS*RSPCQG
Trigger: GCCCTGGCATGGAGATCGCCAACTGTTCCAGGAACG...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCAGCCTCCCAAGAAACTaGGACCACAGGCACGCACCA +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSSLPRN*DHRHAP
Trigger: TGGTGCGTGCCTGTGGTCCCAGTTTCTTGGGAGGCT...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGGGGAGCGTCCCGGGATaGGCGACACTGGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: KFKISNCLQAYQGLKLALGSVPG*ATLAGP
Trigger: CGGCCCGGCCAGTGTCGCTCATCCCGGGACGCTCCC...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGTGGTGCAGACAGGCGTaGATGCATTGGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMWCRQA*MHWSHR
Trigger: CCTGTGGGACCAATGCATTCACGCCTGTCTGCACCA...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGCAGCTGCTTGAGGTCTaGTTCAGGGGTACCCGCACT +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMQLLEV*FRGTRT
Trigger: AGTGCGGGTACCCCTGAATCAGACCTCAAGCAGCTG...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCACCGCCGCATGTTGCTaGACATTTTGTCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSTAACC*TFCPGG
Trigger: TCCCCCTGGACAAAATGTTCAGCAACATGCGGCGGT...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCCACCAATATCGTTCTTaGACACCCGGGCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSHQYRS*TPGQLW
Trigger: CCAGAGCTGCCCGGGTGTGCAAGAACGATATTGGTG...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTGCCAGCCACCACACTaGGGGGCCGGGCTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSCQPPH*GAGLSQ
Trigger: CTGCGACAGCCCGGCCCCGCAGTGTGGTGGCTGGCA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCCGGCCAACCGGTGGGTaGGCAGGTTCGCGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTRPTGG*AGSRPA
Trigger: TGCTGGGCGCGAACCTGCCCACCCACCGGTTGGCCG...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCATGGGGGCACCGGCTTaGGGGCCACGAGCACGGTCC +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTMGAPA*GPRARS
Trigger: GGACCGTGCTCGTGGCCCCCAAGCCGGTGCCCCCAT...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGACACCCGGGCAGCTCTaGAGAACACTGTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKTPGQL*RTLFSH
Trigger: GTGGGAAAACAGTGTTCTCCAGAGCTGCCCGGGTGT...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGCCACACGCCATCCACTaGGCAGGGCAAAATGTTGCA +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKPHAIH*AGQNVA
Trigger: TGCAACATTTTGCCCTGCCCAGTGGATGGCGTGTGG...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATGGGCAAGGGGCCTCTaGCTCTGGGCACGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPWARGL*LWARVF
Trigger: GAAGACACGTGCCCAGAGTCAGAGGCCCCTTGCCCA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCTCAGGCGAGCCTTCATaGATGTGGTCCAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSSGEPS*MWSRCL
Trigger: AAGACACCTGGACCACATTCATGAAGGCTCGCCTGA...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCCTGGTCTCAAACTCCTaGGCTCAGGTGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATLVSNS*AQVIRP
Trigger: TGGGCGGATCACCTGAGCTCAGGAGTTTGAGACCAG...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGTCGGACACGCAGAGATaGTCTGTTCCCACTGCGTCA +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMSDTQR*SVPTAS
Trigger: TGACGCAGTGGGAACAGAGCATCTCTGCGTGTCCGA...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGGACCACACACCAAAGTaGCCATCCACGGTGAGATTC +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKDHTPK*PSTVRF
Trigger: GAATCTCACCGTGGATGGGCACTTTGGTGTGTGGTC...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCATGGGAGTGGGGTTGCTaGAGGAGCGCTGCCGCACCT +
Preference number: 4 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPWEWGC*RSAAAP
Trigger: AGGTGCGGCAGCGCTCCTGCAGCAACCCCACTCCCA...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATGCGGCGAGCTTGAATaGCACCCCCGCATTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPCGELE*HPRIGL
Trigger: CAGCCCAATGCGGGGGTGGCATTCAAGCTCGCCGCA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGAGGAGCAAGGTGGGGTaGCTCACAGTCTACTGTAAC +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKRSKVG*LTVYCN
Trigger: GTTACAGTAGACTGTGAGGCACCCCACCTTGCTCCT...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGATCCTCTTCAGCACCTaGCTAGGGAAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMILFST*LGKWRQ
Trigger: CTGCCTCCACTTCCCTAGCCAGGTGCTGAAGAGGAT...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCCAGTCATCCAGCGCCTaGGGGCCAGAGCGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTQSSSA*GPERLR
Trigger: TCGGAGCCGCTCTGGCCCCCAGGCGCTGGATGACTG...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGGAGCGCGAGTTTTCTTaGTACTTGAAGGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKEREFS*YLKGPE
Trigger: CTCTGGGCCCTTCAAGTACCAAGAAAACTCGCGCTC...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGGGGCACTGTGGTCACTaGCTGTACCACCTCATGCAT +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMGHCGH*LYHLMH
Trigger: ATGCATGAGGTGGTACAGCCAGTGACCACAGTGCCC...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGACGAACAGGACACTCTaGCTGTGCAGGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMTNRTL*LCRICR
Trigger: CCTGCAGATCCTGCACAGCCAGAGTGTCCTGTTCGT...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGTCCAGCCTCCGTTCCTaGAACAGTTGGCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMSSLRS*NSWRSP
Trigger: TGGAGATCGCCAACTGTTCCAGGAACGGAGGCTGGA...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGAGCGCTGCCGCACCTaGAAGCCGATCCCACAGGTA +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPERCRT*KPIPQV
Trigger: TACCTGTGGGATCGGCTTCCAGGTGCGGCAGCGCTC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAAACAGGAGGATGCACTaGCGGGCGCGGACTTGGACG +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPNRRMH*RARTWT
Trigger: CGTCCAAGTCCGCGCCCGCCAGTGCATCCTCCTGTT...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGACGGCCGGCTCTCCGTaGTGTTCCCGGAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMTAGSP*CSRSTG
Trigger: GCCAGTGCTCCGGGAACACCACGGAGAGCCGGCCGT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGGAGGCAGCCGAGGATaGAGCTGCTCAGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMGGSRG*SCSAPR
Trigger: CCGTGGGGCTGAGCAGCTCCATCCTCGGCTGCCTCC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGCTCAAAGCTGAGGCTTaGAGCAGGTGTGAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKLKAEA*SRCELP
Trigger: AGGCAACTCACACCTGCTCCAAGCCTCAGCTTTGAG...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CAA 72 bp CCCCACAAATGGCAGCTAGAGATGGTAAGAAGGGGGTaGGTAGGAAAGTGTGACTGCACACTCAGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PHKWQLEMVRRG*VGKCDCTLSSA
Trigger: AGCACTGCTGAGTGTGCAGTCACACTTTCCTACCAACCCCCTTCTTACCATCTCTAGCTGCCATTTGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTCCGCCCCCTACTCGCTaGGTTCCAGAATGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSPPPTR*VPEWGH
Trigger: GTGCCCCCATTCTGGAACTCAGCGAGTAGGGGGCGG...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGGCCATGCCACTGATCTaGTCATGGATCTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMAMPLI*SWISVR
Trigger: CCTGACTGAGATCCATGATCAGATCAGTGGCATGGC...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGCAGCAAACAGCTGCTTaGGGTCTGATTCAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMQQTAA*GLIQGY
Trigger: GTACCCCTGAATCAGACCTCAAGCAGCTGTTTGCTG...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCTTCCAGGGACCTCTGTaGATGGTGTTAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSFQGPL*MVLAHS
Trigger: AGAGTGTGCTAACACCATTCACAGAGGTCCCTGGAA...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGTTCCAGGGACCTCTGTaGATGGTGTTAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKFQGPL*MVLAHS
Trigger: AGAGTGTGCTAACACCATTCACAGAGGTCCCTGGAA...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCTGCGAGGAGCGCTGGTaGCAGTCATCCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTCEERW*QSSSAW
Trigger: CCAGGCGCTGGATGACTGGCACCAGCGCTCCTCGCA...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCGGCCCTGGTCCACGGTaGCACACTGGAAGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTGPGPR*HTGSGG
Trigger: ACCCCCACTTCCAGTGTGGCACCGTGGACCAGGGCC...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATGCCATCTGTGTGCGTaGAAGGCGTCCACGGAGACC +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPCHLCA*KASTET
Trigger: GGTCTCCGTGGACGCCTTGCACGCACACAGATGGCA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCAAGTTGGCGATCTCCATaGCAGGGCCCTCGCACTGCC +
Preference number: 4 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPSWRSP*QGPRTA
Trigger: GGCAGTGCGAGGGCCCTGGCATGGAGATCGCCAACT...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTCCCCGCATTGGGCTGTaGACCGTTCCCAAGGACCCC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSPRIGL*TVPKDP
Trigger: GGGGTCCTTGGGAACGGTGCACAGCCCAATGCGGGG...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCTCCGCGGGGCAGTCCTaGGTGGGAGAAGGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLASAGQS*VGEGSV
Trigger: GACGCTCCCTTCTCCCACCCAGGACTGCCCCGCGGA...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTAGGTGCGAGGAGCGCTaGTGCCAGTCATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSRCEER*CQSSSA
Trigger: GGCGCTGGATGACTGGCACCAGCGCTCCTCGCACCT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGCAAGGAGAGAGAGGATaGAGGACGCGTTTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKQGERG*RTRFLN
Trigger: ATTGAGGAAACGCGTCCTCCATCCTCTCTCTCCTTG...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAAGTGGGGGTTTGGGTTaGGATACGGTAGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPSGGLG*DTVARP
Trigger: CGGCCTGGCTACCGTATCCCAACCCAAACCCCCACT...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCTCCAGCCTCCGTTCCTaGAACAGTTGGCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATSSLRS*NSWRSP
Trigger: TGGAGATCGCCAACTGTTCCAGGAACGGAGGCTGGA...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCACTCCGACCAGCTCTCTaGGCAGGGCTGCGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPLRPAL*AGLRVA
Trigger: TGCAACACGCAGCCCTGCCCAGAGAGCTGGTCGGAG...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTGGCGGGCGCGGACTTaGACGCCAGAGGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSWRART*TPEASH
Trigger: GTGTGAAGCCTCTGGCGTCCAAGTCCGCGCCCGCCA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGTGGCGGGCGCGGACTTaGACGCCAGAGGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMWRART*TPEASH
Trigger: GTGTGAAGCCTCTGGCGTCCAAGTCCGCGCCCGCCA...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCACGGCCGGCTCTCCGTaGTGTTCCCGGAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETTAGSP*CSRSTG
Trigger: GCCAGTGCTCCGGGAACACCACGGAGAGCCGGCCGT...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGTTGCCTTCCATTGATTaGTTAGGTGACCTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKLPSID*LGDLRP
Trigger: TGGGCGGAGGTCACCTAACCAATCAATGGAAGGCAA...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTGGGCAAGGGGCCTCTaGCTCTGGGCACGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSWARGL*LWARVF
Trigger: GAAGACACGTGCCCAGAGTCAGAGGCCCCTTGCCCA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATGGTGCAGACAGGCGTaGATGCATTGGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPWCRQA*MHWSHR
Trigger: CCTGTGGGACCAATGCATTCACGCCTGTCTGCACCA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGCCTCATGCATCAGAATaGACTTCTGAGCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKPHASE*TSEHPA
Trigger: TGCAGGATGCTCAGAAGTTCATTCTGATGCATGAGG...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGCCACGACGTCCAGGCTaGCCAAGCCCCGTTGACCGT +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWPRRPG*PSPVDR
Trigger: ACGGTCAACGGGGCTTGGTCAGCCTGGACGTCGTGG...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCCCACGACGTCCAGGCTaGCCAAGCCCCGTTGACCGT +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAPRRPG*PSPVDR
Trigger: ACGGTCAACGGGGCTTGGTCAGCCTGGACGTCGTGG...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGTGGAGTTACCCCCAATaGCACACACAAGAAAACCCC +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMWSYPQ*HTQENP
Trigger: GGGGTTTTCTTGTGTGTGTCATTGGGGGTAACTCCA...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGGACGAGCGCTTCTCTaGCCTGCACCACGTCGACTG +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMGRALL*PAPRRL
Trigger: CAGTCGACGTGGTGCAGGGCAGAGAAGCGCTCGTCC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCGGTCCTGGGCCCCAATaGAGGTGCTGCGTGTGCGGT +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAGPGPQ*RCCVCG
Trigger: ACCGCACACGCAGCACCTGCATTGGGGCCCAGGACC...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACCCAGGGCCCTCGCACTaGCAGCCACCACACTGCGGG +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHPGPSH*QPPHCG
Trigger: CCCGCAGTGTGGTGGCTGGCAGTGCGAGGGCCCTGG...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTAGTTGGCGATCTCCATaGCAGGGCCCTCGCACTGCC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSSWRSP*QGPRTA
Trigger: GGCAGTGCGAGGGCCCTGGCATGGAGATCGCCAACT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCCCCCGCATTGGGCTGTaGACCGTTCCCAAGGACCCC +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETPRIGL*TVPKDP
Trigger: GGGGTCCTTGGGAACGGTGCACAGCCCAATGCGGGG...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAAGTGCCTCTTCTGTGTaGAGCCCCAGGCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPSASSV*SPRQMS
Trigger: GGACATCTGCCTGGGGCTGCACACAGAAGAGGCACT...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGTGGGGAACAGGAGGATaGACTGGCGGGCGCGGACTT +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMWGTGG*TGGRGL
Trigger: AAGTCCGCGCCCGCCAGTGCATCCTCCTGTTCCCCA...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGTCCCGGAGCACTGGCTaGCCATGGGGAACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMSRSTG*PWGTGG
Trigger: TCCTCCTGTTCCCCATGGGCAGCCAGTGCTCCGGGA...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCATCTTGAAATGCTGTTaGCTCCATGCAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSILKCC*LHAGRG
Trigger: ACCTCTCCCTGCATGGAGGCAACAGCATTTCAAGAT...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGAACGTTGTGTCAACATaGTTCCCCAAGTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKNVVST*FPKCIR
Trigger: CCTGATGCACTTGGGGAAGCATGTTGACACAACGTT...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGCGGGATGAGCGACACTaGCCGGGCCGCCCCTGCACG +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQRDERH*PGRPCT
Trigger: CGTGCAGGGGCGGCCCGGCCAGTGTCGCTCATCCCG...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGCGGGGCAGTCCTGGGTaGGAGAAGGGAGCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMRGSPG*EKGASR
Trigger: CCGGGACGCTCCCTTCTCCCACCCAGGACTGCCCCG...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACCGGCCAACCGGTGGGTaGGCAGGTTCGCGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHRPTGG*AGSRPA
Trigger: TGCTGGGCGCGAACCTGCCCACCCACCGGTTGGCCG...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCCGTACCCTGGGCCTCTaGGTGGGCGAGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLARTLGL*VGESPQ
Trigger: CTGTGGAGACTCGCCCACCCAGAGGCCCAGGGTACG...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCGAGCGCTGCCGCACCTaGAAGCCGATCCCACAGGTA +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTERCRT*KPIPQV
Trigger: TACCTGTGGGATCGGCTTCCAGGTGCGGCAGCGCTC...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAAGGGTGTCCAGGGCGTaGTCTTCTTCAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPRVSRA*SSSAQD
Trigger: GTCCTGAGCTGAAGAAGACCACGCCCTGGACACCCT...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGAGGCCGGGGCTGGATTaGAGCAAGAGCGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMRPGLD*SKSGSS
Trigger: TGAGGACCCGCTCTTGCTCCAATCCAGCCCCGGCCT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGCTCCGACCAGCTCTCTaGGCAGGGCTGCGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMLRPAL*AGLRVA
Trigger: TGCAACACGCAGCCCTGCCCAGAGAGCTGGTCGGAG...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGTGTTCCCGGAGCACTaGCTGCCCATGGGGAACAGG +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMVFPEH*LPMGNR
Trigger: CCTGTTCCCCATGGGCAGCCAGTGCTCCGGGAACAC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCGTGTTCCCGGAGCACTaGCTGCCCATGGGGAACAGG +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTVFPEH*LPMGNR
Trigger: CCTGTTCCCCATGGGCAGCCAGTGCTCCGGGAACAC...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGCCCACGGCGATCATGTaGAACATGTTGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMPTAIM*NMLNSP
Trigger: TGGAGAGTTCAACATGTTCCACATGATCGCCGTGGG...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGAGCAATGGGACACTCTaGTGGCTTGAAATGCACTTG +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKSNGTL*WLEMHL
Trigger: CAAGTGCATTTCAAGCCACCAGAGTGTCCCATTGCT...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
3UTR CAA 72 bp TTGTTTCTCAAAGCTGAGGCTTGGAGCAGGTGTGAGTaGCCTTCCATTGATTGGTTAGGTGACCTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LFLKAEAWSRCE*PSIDWLGDLRP
Trigger: TGGGCGGAGGTCACCTAACCAATCAATGGAAGGCAACTCACACCTGCTCCAAGCCTCAGCTTTGAGAAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGTCGGTTCTCTGGCACTaGGTCGTACCCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMSVLWH*VVPWAS
Trigger: AGAGGCCCAGGGTACGACTCAGTGCCAGAGAACCGA...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGCGATGGCGCTCAGGTTaGAGACGCACACAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMRWRSG*RRTQLR
Trigger: CCTCAGCTGTGTGCGTCTTCAACCTGAGCGCCATCG...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCAGTTTTCTTGGTACTTaGAGGGCCCAGAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATSFLGT*RAQRRP
Trigger: AGGCCTTCTCTGGGCCCTTCAAGTACCAAGAAAACT...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTAGTGCCCATCCACGGTaGGATTCCTGGTCGGACACG +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSSAHPR*DSWSDT
Trigger: CGTGTCCGACCAGGAATCTCACCGTGGATGGGCACT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTCTGACCAAGCCCCGTTaGCCGTGTGGGCAGAGTATC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSLTKPR*PCGQSI
Trigger: GATACTCTGCCCACACGGTCAACGGGGCTTGGTCAG...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCGAAGACTCTGACATATaGGGAATGAGTGAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSEDSDI*GMSERQ
Trigger: TTGCCTCTCACTCATTCCTCATATGTCAGAGTCTTC...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGGGCTTTCTTGAGAGGTaGTTCACAAGTGCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMGFLER*FTSARR
Trigger: TCTCCTTGCACTTGTGAATCACCTCTCAAGAAAGCC...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652226.1
CDS-3UTR TCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCGTGGACGCAGAAGGCTaGCTTCCGACCACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTVDAEG*LPTTCF
Trigger: GAAGCAGGTGGTCGGAAGTCAGCCTTCTGCGTCCAC...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652226.1
CDS-3UTR GCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCACACACCAACACAGGTaGGAGGAGCGCTGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTTHQHR*EERWCQ
Trigger: CTGGCACCAGCGCTCCTCGCACCTGTGTTGGTGTGT...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCACACCAATATCGTTCTTaGACACCCGGGCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPHQYRS*TPGQLW
Trigger: CCAGAGCTGCCCGGGTGTGCAAGAACGATATTGGTG...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCGGACGAGCGCTTCTCTaGCCTGCACCACGTCGACTG +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAGRALL*PAPRRL
Trigger: CAGTCGACGTGGTGCAGGGCAGAGAAGCGCTCGTCC...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTAGGATCCCACGGCGCTaGCATCTGTGTGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSRIPRR*HLCACK
Trigger: CTTGCACGCACACAGATGGCAGCGCCGTGGGATCCT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGTGCCAGCCACCACACTaGGGGGCCGGGCTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQCQPPH*GAGLSQ
Trigger: CTGCGACAGCCCGGCCCCGCAGTGTGGTGGCTGGCA...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGGCCTGGGAGTGGGGTTaGTGCAGGAGCGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMAWEWG*CRSAAA
Trigger: TGCGGCAGCGCTCCTGCAGCAACCCCACTCCCAGGC...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCTGCTGCAGTCACGGCTaGACTGTGACCACGACGTCC +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTCCSHG*TVTTTS
Trigger: GGACGTCGTGGTCACAGTGCAGCCGTGACTGCAGCA...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTCCGAATGCCCCTGCTaGAGTCACGGCTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSSECPC*SHGCTV
Trigger: CACAGTGCAGCCGTGACTGCAGCAGGGGCATTCGGA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGGGCAGGGCAAAATGTTaGATTCCTGGTATTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMGRAKC*IPGIPE
Trigger: CTCTGGAATACCAGGAATGCAACATTTTGCCCTGCC...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCTACGCTACTGGATCTTaGCACAGATACTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSYATGS*HRYFWD
Trigger: ATCCCAGAAGTATCTGTGGCAAGATCCAGTAGCGTA...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCAGCCGAGGATGGAGCTaGTCAGCCCCACGGCGATCA +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETSRGWS*SAPRRS
Trigger: TGATCGCCGTGGGGCTGAGCAGCTCCATCCTCGGCT...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTGTCGCATCGTGGGATTaGTGCTGGTACCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSVASWD*CWYRWQ
Trigger: CTGCCAGCGGTACCAGCAGCAATCCCACGATGCGAC...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGTGCAGAGGTTCAGCTTaGTTTTGGCCAACAGTCATG +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMCRGSA*FWPTVM
Trigger: CATGACTGTTGGCCAAAAGCAAGCTGAACCTCTGCA...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGAATTATCCACCGCCATaGAGCAGAGAAGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKNYPPP*SREGES
Trigger: TGATTCTCCTTCTCTGCTGCATGGCGGTGGATAATT...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652226.1
CDS-3UTR CCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAAGACGACCCTCGAGGTaGCAAAGTTGGGTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPRRPSR*QSWVSK
Trigger: CTTGGACACCCAACTTTGCCACCTCGAGGGTCGTCT...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTGACTCCACAGCCACGTaGGCACTCCAGCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSDSTAT*ALQPKS
Trigger: AGACTTGGGCTGGAGTGCCCACGTGGCTGTGGAGTC...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCCTAGGCTTCGGTAAATaGCAGGATCACGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATLGFGK*QDHVLE
Trigger: TTCCAGGACGTGATCCTGCCATTTACCGAAGCCTAG...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTATGCCACCCCCGCATTaGGCTGTGCACCGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSMPPPH*AVHRSQ
Trigger: TTGGGAACGGTGCACAGCCCAATGCGGGGGTGGCAT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGTTGGTGTTGCAAGACTaGTACTCCACATTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMLVLQD*YSTLQP
Trigger: AGGCTGCAATGTGGAGTACCAGTCTTGCAACACCAA...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGTCCATAGGCCGGGGCTaGATTGGAGCAAGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMSIGRG*IGARAG
Trigger: ACCCGCTCTTGCTCCAATCCAGCCCCGGCCTATGGA...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGCCGGTGTGGACCAGGTaGAATTCCTGGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMPVWTR*NSWASQ
Trigger: CTGGGAAGCCCAGGAATTCCACCTGGTCCACACCGG...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGCCATGCCACTGATCTaGTCATGGATCTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPAMPLI*SWISVR
Trigger: CCTGACTGAGATCCATGATCAGATCAGTGGCATGGC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCGCTCCCCACCAGCTGTaGGGAGCGCTGTGGAATTGT +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAAPHQL*GALWNC
Trigger: ACAATTCCACAGCGCTCCTCACAGCTGGTGGGGAGC...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGAAGACGCACACAGCTaGGGCCGCAATGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMEDAHS*GRNAVH
Trigger: GTGAACAGCATTGCGGCCTCAGCTGTGTGCGTCTTC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCTCATGTGGAACATGTTaGACTCTCCACACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSSCGTC*TLHTFS
Trigger: AGAAAAGGTGTGGAGAGTTCAACATGTTCCACATGA...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCGACACTCTGGTGGCTTaGAATGCACTTGAAATGTAT +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSDTLVA*NALEMY
Trigger: ATACATTTCAAGTGCATTTCAAGCCACCAGAGTGTC...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGCTCAGAGGCATCAGATaGACTTTTTCAGTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMLRGIR*TFSVVF
Trigger: GAACACGACTGAAAAAGTTCATCTGATGCCTCTGAG...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGCTAGATTTCCCCTACTaGGTATGGACTTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMLDFPY*VWTLSM
Trigger: CATGCTCAAAGTCCATACTCAGTAGGGGAAATCTAG...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACAGTGGAGGCAGCAGCTaGAGCCGCCCCCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHSGGSS*SRPLPL
Trigger: AAGTGGCAGGGGGCGGCTGCAGCTGCTGCCTCCACT...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGCCTTTGATTTGCCTTTaGTGTAACAGGCCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKPLICL*CNRPFW
Trigger: CCAAAAAGGCCTGTTACAGCAAAGGCAAATCAAAGG...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGCAGACAGGCGTGAATaGATTGGTCCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPADRRE*IGPTGE
Trigger: TTCACCTGTGGGACCAATGCATTCACGCCTGTCTGC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCAGGACACTCTGGCTGTaGAGGATCTGCAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTRTLWL*RICRLL
Trigger: CAGGAGCCTGCAGATCCTGCACAGCCAGAGTGTCCT...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCTGCCATCTGTGTGCGTaGAAGGCGTCCACGGAGACC +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETCHLCA*KASTET
Trigger: GGTCTCCGTGGACGCCTTGCACGCACACAGATGGCA...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCTCCGAATGCCCCTGCTaGAGTCACGGCTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETSECPC*SHGCTV
Trigger: CACAGTGCAGCCGTGACTGCAGCAGGGGCATTCGGA...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGGGTTCCGAATGCCCCTaGTGCAGTCACGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWGSECP*CSHGCT
Trigger: AGTGCAGCCGTGACTGCAGCAGGGGCATTCGGAACC...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGAGTGCCTCTTCTGTGTaGAGCCCCAGGCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMSASSV*SPRQMS
Trigger: GGACATCTGCCTGGGGCTGCACACAGAAGAGGCACT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTCTGCGTGTTGCAGAGTaGCTCTTCTGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSLRVAE*LFCVQP
Trigger: GGGCTGCACACAGAAGAGGCACTCTGCAACACGCAG...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCCTCTCTGGGCAGGGCTaGGTGTTGCAGAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETLSGQG*VLQSAS
Trigger: AGAGGCACTCTGCAACACGCAGCCCTGCCCAGAGAG...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGGGGAGTAAGCTTGATTaGCTTTCTATGGCAGATATG +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKGSKLD*LSMADM
Trigger: CATATCTGCCATAGAAAGGCAATCAAGCTTACTCCC...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCGACTCCACAGCCACGTaGGCACTCCAGCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETDSTAT*ALQPKS
Trigger: AGACTTGGGCTGGAGTGCCCACGTGGCTGTGGAGTC...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTCCACGGTGCCACACTaGAAGTGGGGGTTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSSTVPH*KWGFGL
Trigger: CAACCCAAACCCCCACTTCCAGTGTGGCACCGTGGA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGTTCACGTACAGGCCCTaGTCCACGGTGCCACACTGG +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWFTYRP*STVPHW
Trigger: CCAGTGTGGCACCGTGGACCAGGGCCTGTACGTGAA...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCCAGAAAGCCCATCTGTaGAGCAGCCACTGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTQKAHL*SSHWCR
Trigger: ACGGCACCAGTGGCTGCTCCACAGATGGGCTTTCTG...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGGCCCCGTTGACCGTGTaGGCAGAGTATCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWAPLTV*AEYLPA
Trigger: TGCTGGGAGATACTCTGCCCACACGGTCAACGGGGC...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCACTGGTATTCCAGAGATaGGCCAAGGCAAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPLVFQR*AKARHS
Trigger: GGAATGCCTTGCCTTGGCCCATCTCTGGAATACCAG...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCCCGGTGTGGACCAGGTaGAATTCCTGGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETPVWTR*NSWASQ
Trigger: CTGGGAAGCCCAGGAATTCCACCTGGTCCACACCGG...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCACATGGACCTGTGAAGTaGGCAACCGTTTCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPHGPVK*ATVSGN
Trigger: GTTCCCGGAAACGGTTGCCCACTTCACAGGTCCATG...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCCCACAGCCCCAGGCTTaGGAACAGCCATGCTATAAC +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTPQPQA*EQPCYN
Trigger: GTTATAGCATGGCTGTTCTCAAGCCTGGGGCTGTGG...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTCCACAGCCCCAGGCTTaGGAACAGCCATGCTATAAC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSPQPQA*EQPCYN
Trigger: GTTATAGCATGGCTGTTCTCAAGCCTGGGGCTGTGG...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCCAGCATTCTTCGCTCTaGACTCCCGTAACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAQHSSL*TPVTRG
Trigger: GCCCCTGGTTACGGGAGTTCAGAGCGAAGAATGCTG...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTAGCGGGCCATGCCACTaGTCTGATCATGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSSGPCH*SDHGSQ
Trigger: CTGAGATCCATGATCAGATCAGTGGCATGGCCCGCT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGGCTCCCCACCAGCTGTaGGGAGCGCTGTGGAATTGT +
Preference number: 4 (lower is better)
Translates to: KFKISNCLQAYQGLKLALAPHQL*GALWNC
Trigger: ACAATTCCACAGCGCTCCTCACAGCTGGTGGGGAGC...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCGAAGACGCACACAGCTaGGGCCGCAATGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAEDAHS*GRNAVH
Trigger: GTGAACAGCATTGCGGCCTCAGCTGTGTGCGTCTTC...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGCAGCTGCTTGAGGTCTaGTTCAGGGGTACCCGCACT +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWQLLEV*FRGTRT
Trigger: AGTGCGGGTACCCCTGAATCAGACCTCAAGCAGCTG...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAAATCCTGCGGCGAGCTTaGATGCCACCCCCGCATTGG +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLEILRRA*MPPPHW
Trigger: CCAATGCGGGGGTGGCATTCAAGCTCGCCGCAGGAT...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGCGTTGTCAGAGATGTTaGCAGGTGTCCAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMRCQRC*QVSRVS
Trigger: GGACACCCTGGACACCTGTCAACATCTCTGACAACG...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGACCGCCGCATGTTGCTaGACATTTTGTCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMTAACC*TFCPGG
Trigger: TCCCCCTGGACAAAATGTTCAGCAACATGCGGCGGT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATCCAAACTTCGACTCTaGAGCCTCAGAAACATGGGC +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPSKLRL*SLRNMG
Trigger: GCCCATGTTTCTGAGGCTTCAGAGTCGAAGTTTGGA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGCTCGTGGTAGGGGCTaGTTGCCACACATTGGGTAT +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMARGRG*LPHIGY
Trigger: ATACCCAATGTGTGGCAATCAGCCCCTACCACGAGC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCACTTATCGATGATCAGTaGAGAGACCACAGGGATCCC +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPLIDDQ*RDHRDP
Trigger: GGGATCCCTGTGGTCTCTTCACTGATCATCGATAAG...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAAACTCCTGAGCTCAGGTaGTCCGCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLETPELR*SAHLGL
Trigger: GAGGCCAAGGTGGGCGGATCACCTGAGCTCAGGAGT...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGTTTGCTATGCACTTTTaGAGAATCCAACATTGGACC +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKFAMHF*RIQHWT
Trigger: GGTCCAATGTTGGATTCTTCAAAAGTGCATAGCAAA...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGAGTGGAGGCAGCAGCTaGAGCCGCCCCCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQSGGSS*SRPLPL
Trigger: AAGTGGCAGGGGGCGGCTGCAGCTGCTGCCTCCACT...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGGGCCCTGGTCCACGGTaGCACACTGGAAGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQGPGPR*HTGSGG
Trigger: ACCCCCACTTCCAGTGTGGCACCGTGGACCAGGGCC...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCAGCGCTTCTCTGCCCTaGACCACGTCGACTGCCACG +
Preference number: 4 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTSASLP*TTSTAT
Trigger: CGTGGCAGTCGACGTGGTGCAGGGCAGAGAAGCGCT...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACAGCGCTTCTCTGCCCTaGACCACGTCGACTGCCACG +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHSASLP*TTSTAT
Trigger: CGTGGCAGTCGACGTGGTGCAGGGCAGAGAAGCGCT...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCAGGACACTCTGGCTGTaGAGGATCTGCAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETRTLWL*RICRLL
Trigger: CAGGAGCCTGCAGATCCTGCACAGCCAGAGTGTCCT...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCTGCAGGTGCTGCGTGTaGGGTAGAACTGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETCRCCV*GRTGTS
Trigger: AGAGGTGCCAGTTCTACCGCACACGCAGCACCTGCA...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCTGCAGGTGCTGCGTGTaGGGTAGAACTGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLACRCCV*GRTGTS
Trigger: AGAGGTGCCAGTTCTACCGCACACGCAGCACCTGCA...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTATGCTCTGTTCCCACTaGGTCATGCTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSMLCSH*VMLRLS
Trigger: GGAGAGCCTGAGCATGACGCAGTGGGAACAGAGCAT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGATGCTCTGTTCCCACTaGGTCATGCTCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMMLCSH*VMLRLS
Trigger: GGAGAGCCTGAGCATGACGCAGTGGGAACAGAGCAT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGGCGCTGCCATCTGTGTaGGTGCAAGGCGTCCACGGA +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMALPSV*VQGVHG
Trigger: TCCGTGGACGCCTTGCACGCACACAGATGGCAGCGC...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGAGGATCCCACGGCGCTaGCATCTGTGTGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: KFKISNCLQAYQGLKLALRIPRR*HLCACK
Trigger: CTTGCACGCACACAGATGGCAGCGCCGTGGGATCCT...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGACTGGTACTCCACATTaGAGCCTGCACAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMTGTPH*SLHSQA
Trigger: GGCCTGACTGTGCAGGCTGCAATGTGGAGTACCAGT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCACTGGTACTCCACATTaGAGCCTGCACAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTTGTPH*SLHSQA
Trigger: GGCCTGACTGTGCAGGCTGCAATGTGGAGTACCAGT...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGACACGGGTTGGTGTTaGAAGACTGGTACTCCACAT +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPDTGWC*KTGTPH
Trigger: ATGTGGAGTACCAGTCTTGCAACACCAACCCGTGTC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCTGGGTTCGGGGTTGTTaGAAACACGCTTCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTWVRGC*KHASGS
Trigger: GGAACCGGAAGCGTGTTTGCAACAACCCCGAACCCA...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCGGCAGGGCTGCGTGTTaGAGAGTGCCTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETGRAAC*RVPLLC
Trigger: ACACAGAAGAGGCACTCTGCAACACGCAGCCCTGCC...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGCTCTCTGGGCAGGGCTaGGTGTTGCAGAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KFKISNCLQAYQGLKLALLSGQG*VLQSAS
Trigger: AGAGGCACTCTGCAACACGCAGCCCTGCCCAGAGAG...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAATGGGGAACAGGAGGATaGACTGGCGGGCGCGGACTT +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLEWGTGG*TGGRGL
Trigger: AAGTCCGCGCCCGCCAGTGCATCCTCCTGTTCCCCA...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGAATATTATGGACCTATaGACTTCTTGTGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKNIMDL*TSCGRS
Trigger: GCTCCTTCCACAAGAAGTGCATAGGTCCATAATATT...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCACCATTAGTACCTGTTaGCTCTGGTTCTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATTISTC*LWFCVP
Trigger: TGGAACACAGAACCAGAGGCAACAGGTACTAATGGT...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGTCGAGGTGGCAAAGTTaGGTGTCCAAGCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWSRWQS*VSKPAP
Trigger: CGGAGCTGGCTTGGACACCCAACTTTGCCACCTCGA...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGCGTACCCTGGGCCTCTaGGTGGGCGAGTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQRTLGL*VGESPQ
Trigger: CTGTGGAGACTCGCCCACCCAGAGGCCCAGGGTACG...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCACTAGGCTTCGGTAAATaGCAGGATCACGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPLGFGK*QDHVLE
Trigger: TTCCAGGACGTGATCCTGCCATTTACCGAAGCCTAG...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCGTGCCACACTGGAAGTaGGGGTTTGGGTTGGGATAC +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTVPHWK*GFGLGY
Trigger: GTATCCCAACCCAAACCCCCACTTCCAGTGTGGCAC...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGGGCACTGTGGTCACTaGCTGTACCACCTCATGCAT +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMGHCGH*LYHLMH
Trigger: ATGCATGAGGTGGTACAGCCAGTGACCACAGTGCCC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCACGTCGACTGCCACGTaGGAAAAGCGGCTATTGTCC +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTTSTAT*EKRLLS
Trigger: GGACAATAGCCGCTTTTCCCACGTGGCAGTCGACGT...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTACGAACAGGACACTCTaGCTGTGCAGGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSTNRTL*LCRICR
Trigger: CCTGCAGATCCTGCACAGCCAGAGTGTCCTGTTCGT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGCCACACGCCATCCACTaGGCAGGGCAAAATGTTGCA +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMPHAIH*AGQNVA
Trigger: TGCAACATTTTGCCCTGCCCAGTGGATGGCGTGTGG...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAAAGGCCGGGGCTGGATTaGAGCAAGAGCGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLERPGLD*SKSGSS
Trigger: TGAGGACCCGCTCTTGCTCCAATCCAGCCCCGGCCT...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCGCATCAGGAGCAAGGTaGGGTGCCTCACAGTCTACT +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTASGAR*GASQST
Trigger: AGTAGACTGTGAGGCACCCCACCTTGCTCCTGATGC...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCAGAGGTGAGGGTGAATaGACTGGGTGGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLARGEGE*TGWVGR
Trigger: CCTTCCCACCCACCCAGTCCATTCACCCTCACCTCT...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTCAAGGGTCAGACCCATaGACCTGTGAAGTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSQGSDP*TCEVGN
Trigger: GTTGCCCACTTCACAGGTCCATGGGTCTGACCCTTG...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGTCGGTTCTCTGGCACTaGGTCGTACCCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMSVLWH*VVPWAS
Trigger: AGAGGCCCAGGGTACGACTCAGTGCCAGAGAACCGA...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGCATTGGTCCCACAGGTaGATAACCGGTCGCCACCCA +
Preference number: 4 (lower is better)
Translates to: KFKISNCLQAYQGLKLALHWSHR*ITGRHP
Trigger: TGGGTGGCGACCGGTTATTCACCTGTGGGACCAATG...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGTCAGGCGAGCCTTCATaGATGTGGTCCAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMSGEPS*MWSRCL
Trigger: AAGACACCTGGACCACATTCATGAAGGCTCGCCTGA...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACCGATGGCGCTCAGGTTaGAGACGCACACAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHRWRSG*RRTQLR
Trigger: CCTCAGCTGTGTGCGTCTTCAACCTGAGCGCCATCG...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTCTGTGGCCAAATAGATaGTGTGGACGAGCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSLWPNR*CGRALL
Trigger: GAGAAGCGCTCGTCCACATCATCTATTTGGCCACAG...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGCTGTGGCCAAATAGATaGTGTGGACGAGCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMLWPNR*CGRALL
Trigger: GAGAAGCGCTCGTCCACATCATCTATTTGGCCACAG...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCGCTCGTGGTAGGGGCTaGTTGCCACACATTGGGTAT +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAARGRG*LPHIGY
Trigger: ATACCCAATGTGTGGCAATCAGCCCCTACCACGAGC...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGAAGTCACCTCTCTTCTaGGCATATGTTGTACCTATT +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMKSPLF*AYVVPI
Trigger: AATAGGTACAACATATGCTCAGAAGAGAGGTGACTT...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGCAGACAGGCGTGAATaGATTGGTCCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMADRRE*IGPTGE
Trigger: TTCACCTGTGGGACCAATGCATTCACGCCTGTCTGC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGGAGAGGAGGTAAAATaGCTAGGCTTCGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPGEEVK*LGFGKW
Trigger: CCATTTACCGAAGCCTAGGCATTTTACCTCCTCTCC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCCATTTGGAGTTGTACTaGGCCGTGCGGAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAHLELY*AVRRGG
Trigger: ACCTCCTCTCCGCACGGCGCAGTACAACTCCAAATG...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGCTGCACCACGTCGACTaGCACGTGGGAAAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMLHHVD*HVGKAA
Trigger: AGCCGCTTTTCCCACGTGGCAGTCGACGTGGTGCAG...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAAGTTCCCACTGCGTCATaGTCAGGCTCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLEVPTAS*SGSPPG
Trigger: GCCTGGAGGAGAGCCTGAGCATGACGCAGTGGGAAC...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGGCGCTGCCATCTGTGTaGGTGCAAGGCGTCCACGGA +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQALPSV*VQGVHG
Trigger: TCCGTGGACGCCTTGCACGCACACAGATGGCAGCGC...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGATAGCAAATGTTCATTaGAGTATCTTTCCTCGCGGT +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMIANVH*SIFPRG
Trigger: ACCGCGAGGAAAGATACTGCAATGAACATTTGCTAT...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCCTCCACATTGCAGCCTaGACAGTCAGGCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETLHIAA*TVRPIL
Trigger: GAGAATGGGCCTGACTGTGCAGGCTGCAATGTGGAG...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCCTCCACATTGCAGCCTaGACAGTCAGGCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLALHIAA*TVRPIL
Trigger: GAGAATGGGCCTGACTGTGCAGGCTGCAATGTGGAG...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTCAGCCAGGCGGGCTTTaGATGTGTATCGGAATCGTT +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSQPGGL*MCIGIV
Trigger: AACGATTCCGATACACATGCAAAGCCCGCCTGGCTG...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCTGGGTTCGGGGTTGTTaGAAACACGCTTCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETWVRGC*KHASGS
Trigger: GGAACCGGAAGCGTGTTTGCAACAACCCCGAACCCA...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACGTCGCATCGTGGGATTaGTGCTGGTACCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHVASWD*CWYRWQ
Trigger: CTGCCAGCGGTACCAGCAGCAATCCCACGATGCGAC...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTAGGAGCAAGGTGGGGTaGCTCACAGTCTACTGTAAC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSRSKVG*LTVYCN
Trigger: GTTACAGTAGACTGTGAGGCACCCCACCTTGCTCCT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGACATGTTGTGTAGTGTaGAGAAATTCTGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKTCCVV*RNSVLL
Trigger: GAGAAGAACAGAATTTCTGCACACTACACAACATGT...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCACTAGTTCCTGCCATTaGGCCAACACTGTAAAACAT +
Preference number: 4 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATTSSCH*ANTVKH
Trigger: ATGTTTTACAGTGTTGGCGCAATGGCAGGAACTAGT...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCTGGACCAAAAGTTTGTaGATTTTCTTGCAGATGATG +
Preference number: 4 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSWTKSL*IFLQMM
Trigger: CATCATCTGCAAGAAAATGCACAAACTTTTGGTCCA...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCATCCTCTTCAGCACCTaGCTAGGGAAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETILFST*LGKWRQ
Trigger: CTGCCTCCACTTCCCTAGCCAGGTGCTGAAGAGGAT...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTGGCAGGATCACGTCCTaGAAAATCCATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSGRITS*KIHGCS
Trigger: GCTACAGCCATGGATTTTCCAGGACGTGATCCTGCC...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCGAGCGCGAGTTTTCTTaGTACTTGAAGGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTEREFS*YLKGPE
Trigger: CTCTGGGCCCTTCAAGTACCAAGAAAACTCGCGCTC...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCAGTGGGGGTTTGGGTTaGGATACGGTAGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTSGGLG*DTVARP
Trigger: CGGCCTGGCTACCGTATCCCAACCCAAACCCCCACT...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGGTGCCACACTGGAAGTaGGGGTTTGGGTTGGGATAC +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWVPHWK*GFGLGY
Trigger: GTATCCCAACCCAAACCCCCACTTCCAGTGTGGCAC...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGCGTTCCTGGAACAGTTaGCGATCTCCATGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KFKISNCLQAYQGLKLALRSWNS*RSPCQG
Trigger: GCCCTGGCATGGAGATCGCCAACTGTTCCAGGAACG...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCATGCCACCCCCGCATTaGGCTGTGCACCGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTMPPPH*AVHRSQ
Trigger: TTGGGAACGGTGCACAGCCCAATGCGGGGGTGGCAT...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGCTCAGGACACGGGTTaGTGTTGCAAGACTGGTACT +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMAQDTG*CCKTGT
Trigger: AGTACCAGTCTTGCAACACCAACCCGTGTCCTGAGC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCAAAATGTTGCATTCCTaGTATTCCAGAGATGGGCCA +
Preference number: 4 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATKMLHS*YSRDGP
Trigger: TGGCCCATCTCTGGAATACCAGGAATGCAACATTTT...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAATCCATAGGCCGGGGCTaGATTGGAGCAAGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLESIGRG*IGARAG
Trigger: ACCCGCTCTTGCTCCAATCCAGCCCCGGCCTATGGA...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATCTTCTCCTCATGTGTaGAAAGTGCCTGTCATGGGT +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPSSPHV*KVPVMG
Trigger: ACCCATGACAGGCACTTTCCACACATGAGGAGAAGA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652226.1
CDS-3UTR TCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACCAGCATTCTTCGCTCTaGACTCCCGTAACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHQHSSL*TPVTRG
Trigger: GCCCCTGGTTACGGGAGTTCAGAGCGAAGAATGCTG...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGCAGCAAACAGCTGCTTaGGGTCTGATTCAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWQQTAA*GLIQGY
Trigger: GTACCCCTGAATCAGACCTCAAGCAGCTGTTTGCTG...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGAGTGCCCATCCACGGTaGGATTCCTGGTCGGACACG +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQSAHPR*DSWSDT
Trigger: CGTGTCCGACCAGGAATCTCACCGTGGATGGGCACT...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACGTGAGACGGGGTGGATaGCAGTCGCATCGTGGGATT +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHVRRGG*QSHRGI
Trigger: AATCCCACGATGCGACTGTCATCCACCCCGTCTCAC...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTCCAAACTTCGACTCTaGAGCCTCAGAAACATGGGC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSSKLRL*SLRNMG
Trigger: GCCCATGTTTCTGAGGCTTCAGAGTCGAAGTTTGGA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGCTTCCCAGGCAAGATaGAAACACTCAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMASQAR*KHSSCF
Trigger: GAAGCAGCTTGAGTGTTTTCATCTTGCCTGGGAAGC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTGCTTCCCAGGCAAGATaGAAACACTCAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSASQAR*KHSSCF
Trigger: GAAGCAGCTTGAGTGTTTTCATCTTGCCTGGGAAGC...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTCTTATCGATGATCAGTaGAGAGACCACAGGGATCCC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSLIDDQ*RDHRDP
Trigger: GGGATCCCTGTGGTCTCTTCACTGATCATCGATAAG...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCTTAAATGCTTATCGATaGTCAGTGAAGAGACCACAG +
Preference number: 4 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATLNAYR*SVKRPQ
Trigger: CTGTGGTCTCTTCACTGATCATCGATAAGCATTTAA...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGAAGACTCTGACATATaGGGAATGAGTGAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPEDSDI*GMSERQ
Trigger: TTGCCTCTCACTCATTCCTCATATGTCAGAGTCTTC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCGGAAGAGCGGCTTTATaGAGGAGTTTCCAAGACAGG +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTGRAAL*RSFQDR
Trigger: CCTGTCTTGGAAACTCCTTCATAAAGCCGCTCTTCC...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCAGACCCATGGACCTGTaGAGTGGGCAACCGTTTCCG +
Preference number: 4 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTRPMDL*SGQPFP
Trigger: CGGAAACGGTTGCCCACTTCACAGGTCCATGGGTCT...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGACAGTCATGCTCTACTaGATTTTCTCGGAAAAAGAA +
Preference number: 4 (lower is better)
Translates to: PAEEQLENHPARFPLLSMTVMLY*IFSEKE
Trigger: TTCTTTTTCCGAGAAAATGCAGTAGAGCATGACTGT...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCCTTCCAGCAAACAGCTaGTTGAGGTCTGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTLPANS*LRSDSG
Trigger: CCCTGAATCAGACCTCAAGCAGCTGTTTGCTGGAAG...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGGACCACACACCAAAGTaGCCATCCACGGTGAGATTC +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWDHTPK*PSTVRF
Trigger: GAATCTCACCGTGGATGGGCACTTTGGTGTGTGGTC...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCATAGCAAATGTTCATTaGAGTATCTTTCCTCGCGGT +
Preference number: 4 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATIANVH*SIFPRG
Trigger: ACCGCGAGGAAAGATACTGCAATGAACATTTGCTAT...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCCATTCTCACAGATCCTaGGGCGAGCTTGAATGCCAC +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETHSHRS*GELECH
Trigger: GTGGCATTCAAGCTCGCCGCAGGATCTGTGAGAATG...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTCAAGGAGAGAGAGGATaGAGGACGCGTTTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSQGERG*RTRFLN
Trigger: ATTGAGGAAACGCGTCCTCCATCCTCTCTCTCCTTG...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGTTCACGTACAGGCCCTaGTCCACGGTGCCACACTGG +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQFTYRP*STVPHW
Trigger: CCAGTGTGGCACCGTGGACCAGGGCCTGTACGTGAA...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACAGGGTGTCCAGGGCGTaGTCTTCTTCAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHRVSRA*SSSAQD
Trigger: GTCCTGAGCTGAAGAAGACCACGCCCTGGACACCCT...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACCAGAAAGCCCATCTGTaGAGCAGCCACTGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHQKAHL*SSHWCR
Trigger: ACGGCACCAGTGGCTGCTCCACAGATGGGCTTTCTG...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGGCCCCGTTGACCGTGTaGGCAGAGTATCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQAPLTV*AEYLPA
Trigger: TGCTGGGAGATACTCTGCCCACACGGTCAACGGGGC...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGAGTGTGGTGTGTCCATaGCCCCCTTACAAAGGACCC +
Preference number: 4 (lower is better)
Translates to: KFKISNCLQAYQGLKLALSVVCP*PPYKGP
Trigger: GGGTCCTTTGTAAGGGGGCCATGGACACACCACACT...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGCATTGGTCCCACAGGTaGATAACCGGTCGCCACCCA +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQHWSHR*ITGRHP
Trigger: TGGGTGGCGACCGGTTATTCACCTGTGGGACCAATG...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAAAGCGGGCCATGCCACTaGTCTGATCATGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLESGPCH*SDHGSQ
Trigger: CTGAGATCCATGATCAGATCAGTGGCATGGCCCGCT...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCAGTTTTCTTGGTACTTaGAGGGCCCAGAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLASFLGT*RAQRRP
Trigger: AGGCCTTCTCTGGGCCCTTCAAGTACCAAGAAAACT...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGCCTCATGCATCAGAATaGACTTCTGAGCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMPHASE*TSEHPA
Trigger: TGCAGGATGCTCAGAAGTTCATTCTGATGCATGAGG...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACCGTTGTCAGAGATGTTaGCAGGTGTCCAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHRCQRC*QVSRVS
Trigger: GGACACCCTGGACACCTGTCAACATCTCTGACAACG...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCATACCGTCATAGAAATTaGTTATTGGAGGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPYRHRN*LLEVWG
Trigger: GCCCCACACCTCCAATAATCAATTTCTATGACGGTA...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATCCAACTTCCATAGTTaGTCCAATGCAGCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPSNFHS*SNAAGN
Trigger: ATTACCTGCTGCATTGGATCAACTATGGAAGTTGGA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATCTCCTCCAGGCTTGTaGATTTCTTCATTACCACAT +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPSPPGL*ISSLPH
Trigger: ATGTGGTAATGAAGAAATGCACAAGCCTGGAGGAGA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCGGCAGGGCAAAATGTTaGATTCCTGGTATTCCAGAG +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTGRAKC*IPGIPE
Trigger: CTCTGGAATACCAGGAATGCAACATTTTGCCCTGCC...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCGTGGTAGGGGCTGATTaGCACACATTGGGTATATCA +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTVVGAD*HTLGIS
Trigger: TGATATACCCAATGTGTGGCAATCAGCCCCTACCAC...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTATCTTGAAATGCTGTTaGCTCCATGCAGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSILKCC*LHAGRG
Trigger: ACCTCTCCCTGCATGGAGGCAACAGCATTTCAAGAT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGTGGTTCTCATTCCATaGTCACTGTATCTATACCAG +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPVVLIP*SLYLYQ
Trigger: CTGGTATAGATACAGTGAGCATGGAATGAGAACCAC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCACACCCGGGCAGCTCTaGAGAACACTGTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTTPGQL*RTLFSH
Trigger: GTGGGAAAACAGTGTTCTCCAGAGCTGCCCGGGTGT...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAAACGTCGACTGCCACGTaGGAAAAGCGGCTATTGTCC +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLETSTAT*EKRLLS
Trigger: GGACAATAGCCGCTTTTCCCACGTGGCAGTCGACGT...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGGCATTCCCCCATACTTaGGTTCGGGGTTGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWAFPHT*VRGCCK
Trigger: TTTGCAACAACCCCGAACCCAAGTATGGGGGAATGC...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCGCATTCCCCCATACTTaGGTTCGGGGTTGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETAFPHT*VRGCCK
Trigger: TTTGCAACAACCCCGAACCCAAGTATGGGGGAATGC...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACGCATCAGGAGCAAGGTaGGGTGCCTCACAGTCTACT +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHASGAR*GASQST
Trigger: AGTAGACTGTGAGGCACCCCACCTTGCTCCTGATGC...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCCAGCCGAGGAACAATTaGAGAACCATCCGGCTAGAT +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAQPRNN*RTIRLD
Trigger: ATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTG...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGGTTAGGATGAACAAATaGGCTAGGCAAGGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWVRMNK*ARQGQG
Trigger: GCCTTGGCCTTGCCTAGCCCATTTGTTCATCCTAAC...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CAA 72 bp GAAATATCTGATGATGAAAATCCAGCCGAGGAACAATaGGAGAACCATCCGGCTAGATTTCCCCTACTGAGT +
Preference number: 4 (lower is better)
Translates to: EISDDENPAEEQ*ENHPARFPLLS
Trigger: ACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGGATTTTCATCATCAGATATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCATTTCTTTATAGGAGATaGCTGGATGCTCGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPFLYRR*LDARFS
Trigger: AGAGAACCGAGCATCCAGTCATCTCCTATAAAGAAA...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATCCGATGTCATAAGATaGCACAAAGTTTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPSDVIR*HKVWLI
Trigger: AATGAGCCAAACTTTGTGTCATCTTATGACATCGGA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGATGGGGCACAGGCCTTaGGGAACTGGGGATTTACAA +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMMGHRP*GTGDLQ
Trigger: TTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCAT...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACATGGGGCACAGGCCTTaGGGAACTGGGGATTTACAA +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHMGHRP*GTGDLQ
Trigger: TTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCAT...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTCTGACATATGAGGAATaGGTGAGAGGCAACATGAAG +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSLTYEE*VRGNMK
Trigger: CTTCATGTTGCCTCTCACTCATTCCTCATATGTCAG...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCCAGCAAAATAGGCTTTaGCTCCCACAGTTTCCATCC +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAQQNRL*LPQFPS
Trigger: GGATGGAAACTGTGGGAGTCAAAGCCTATTTTGCTG...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAATGATTTTGACAGCATaGCCTGCTAATTCTACCAGA +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPMILTA*PANSTR
Trigger: TCTGGTAGAATTAGCAGGTCATGCTGTCAAAATCAT...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGACCCTAAAGAAAGCTaGTGGTTCAGGGACAAAGTT +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMDPKES*WFRDKV
Trigger: AACTTTGTCCCTGAACCATCAGCTTTCTTTAGGGTC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGTCACCAGCCTGTGTCTaGTTTTCCTCTATCTATGGA +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMSPACV*FSSIYG
Trigger: TCCATAGATAGAGGAAAATCAGACACAGGCTGGTGA...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTCCAAATGGCTTTCTTaGGAGGTGATTCACAAGTGC +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSSKWLS*EVIHKC
Trigger: GCACTTGTGAATCACCTCTCAAGAAAGCCATTTGGA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652226.1
CDS-3UTR GCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGCATTTGGAGTTGTACTaGGCCGTGCGGAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQHLELY*AVRRGG
Trigger: ACCTCCTCTCCGCACGGCGCAGTACAACTCCAAATG...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGTTTTCCCACAGTCATaGTCTACTGCATTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMVFPQS*STAFSR
Trigger: CCGAGAAAATGCAGTAGAGCATGACTGTGGGAAAAC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGCAGCCAGGCGGGCTTTaGATGTGTATCGGAATCGTT +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMQPGGL*MCIGIV
Trigger: AACGATTCCGATACACATGCAAAGCCCGCCTGGCTG...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCAGTTTTGCAGCAACCTaGAGAACACATCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETSFAAT*RTHPRF
Trigger: GAAGCGTGGATGTGTTCTGCAGGTTGCTGCAAAACT...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATACAGAAACTGTCAATaGACCAAGAGCAGTAAGAGA +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPYRNCQ*TKSSKR
Trigger: TCTCTTACTGCTCTTGGTGCATTGACAGTTTCTGTA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGAGACGACCCTCGAGGTaGCAAAGTTGGGTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQRRPSR*QSWVSK
Trigger: CTTGGACACCCAACTTTGCCACCTCGAGGGTCGTCT...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGTCCCATTCCACAGCCTaGATAAGAGACAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWSHSTA*IRDRSS
Trigger: TGAGGATCTGTCTCTTATCCAGGCTGTGGAATGGGA...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGGCTCAGGACACGGGTTaGTGTTGCAAGACTGGTACT +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMAQDTG*CCKTGT
Trigger: AGTACCAGTCTTGCAACACCAACCCGTGTCCTGAGC...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAACTGGTATTCCAGAGATaGGCCAAGGCAAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLELVFQR*AKARHS
Trigger: GGAATGCCTTGCCTTGGCCCATCTCTGGAATACCAG...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGCAGGCCTTGAGGAACTaGGGATTTACAAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWQALRN*GFTRSQ
Trigger: TTGGCTTCTTGTAAATCCCCAGTTCCTCAAGGCCTG...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCAGCAATGGGACACTCTaGTGGCTTGAAATGCACTTG +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLASNGTL*WLEMHL
Trigger: CAAGTGCATTTCAAGCCACCAGAGTGTCCCATTGCT...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTAGGCACGCACCACGATaGCTGGCTAATATTTTGTAT +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSRHAPR*LANILY
Trigger: ATACAAAATATTAGCCAGCCATCGTGGTGCGTGCCT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGAGTAAGGGGCTCAAATaGCATCTAGGGTCTGATAAG +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMSKGLK*HLGSDK
Trigger: CTTATCAGACCCTAGATGCCATTTGAGCCCCTTACT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTTTCTTTATAGGAGATaGCTGGATGCTCGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSFLYRR*LDARFS
Trigger: AGAGAACCGAGCATCCAGTCATCTCCTATAAAGAAA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCAGGCTTGAAATGCACTTaGAATGTATCCAAACTTCGA +
Preference number: 4 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPGLKCT*NVSKLR
Trigger: TCGAAGTTTGGATACATTTCAAGTGCATTTCAAGCC...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGACTGAGTATGGACTTTaGGCATGTGCATATAGACAG +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMTEYGL*ACAYRQ
Trigger: CTGTCTATATGCACATGCTCAAAGTCCATACTCAGT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGCTAGATTTCCCCTACTaGGTATGGACTTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWLDFPY*VWTLSM
Trigger: CATGCTCAAAGTCCATACTCAGTAGGGGAAATCTAG...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCACGGTAGCTACACAGTaGTGGACAAACACAACTTAT +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTTVATQ*WTNTTY
Trigger: ATAAGTTGTGTTTGTCCATCACTGTGTAGCTACCGT...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCGTTTTCCCACAGTCATaGTCTACTGCATTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAVFPQS*STAFSR
Trigger: CCGAGAAAATGCAGTAGAGCATGACTGTGGGAAAAC...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAACTTCCAGCAAACAGCTaGTTGAGGTCTGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLELPANS*LRSDSG
Trigger: CCCTGAATCAGACCTCAAGCAGCTGTTTGCTGGAAG...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTCTCCTCCAGGCTTGTaGATTTCTTCATTACCACAT +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSSPPGL*ISSLPH
Trigger: ATGTGGTAATGAAGAAATGCACAAGCCTGGAGGAGA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCGACACGGGTTGGTGTTaGAAGACTGGTACTCCACAT +
Preference number: 4 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTDTGWC*KTGTPH
Trigger: ATGTGGAGTACCAGTCTTGCAACACCAACCCGTGTC...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCAGGATTCCCTTCCTCATaGTTCTGTAACATGTATCAA +
Preference number: 4 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPGFPSS*FCNMYQ
Trigger: TTGATACATGTTACAGAAGCATGAGGAAGGGAATCC...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGAAGTATACATTTTGTaGCAGGCTCTGAATTGGTTT +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPEVYIL*QALNWF
Trigger: AAACCAATTCAGAGCCTGGCACAAAATGTATACTTC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCCCCTTGACTAGTTCCTaGCATTGCGCCAACACTGTA +
Preference number: 4 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTPLTSS*HCANTV
Trigger: TACAGTGTTGGCGCAATGGCAGGAACTAGTCAAGGG...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATGCCACAGATACTTCTaGGATGAAATTAGAGTCAAA +
Preference number: 4 (lower is better)
Translates to: SERQHEVPTAKTLNVINPCHRYF*DEIRVK
Trigger: TTTGACTCTAATTTCATCCCAGAAGTATCTGTGGCA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGCCCACGGCGATCATGTaGAACATGTTGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMPTAIM*NMLNSP
Trigger: TGGAGAGTTCAACATGTTCCACATGATCGCCGTGGG...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGAAACATGGGCAGTCATaGGGCACAGGCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQKHGQS*GTGLEE
Trigger: TTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTT...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCAATGGGACACTCTGGTaGCTTGAAATGCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTNGTLW*LEMHLK
Trigger: TTTCAAGTGCATTTCAAGCCACCAGAGTGTCCCATT...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGAATGGGACACTCTGGTaGCTTGAAATGCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMNGTLW*LEMHLK
Trigger: TTTCAAGTGCATTTCAAGCCACCAGAGTGTCCCATT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCAAAGACGTGTATTTTTaGCAGCAATGGGACACTCTG +
Preference number: 4 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTKDVYF*QQWDTL
Trigger: CAGAGTGTCCCATTGCTGCCAAAAATACACGTCTTT...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGAAAGACGTGTATTTTTaGCAGCAATGGGACACTCTG +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMKDVYF*QQWDTL
Trigger: CAGAGTGTCCCATTGCTGCCAAAAATACACGTCTTT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGCAGCCGAGGAACAATTaGAGAACCATCCGGCTAGAT +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMQPRNN*RTIRLD
Trigger: ATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTG...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCAGTACCTGTTGCCTCTaGTTCTGTGTTCCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTSTCCL*FCVPEP
Trigger: TGGCTCTGGAACACAGAACCAGAGGCAACAGGTACT...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CAA 72 bp GGAAGTATACATTTTGTGCCAGGCTCTGAATTGGTTTaGATAATGCCCTATGTCGCTTGCAATGTGAACTCT +
Preference number: 4 (lower is better)
Translates to: GSIHFVPGSELV*IMPYVACNVNS
Trigger: AGAGTTCACATTGCAAGCGACATAGGGCATTATCAAAACCAATTCAGAGCCTGGCACAAAATGTATACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CAA 72 bp TCACTAGGAAGTATACATTTTGTGCCAGGCTCTGAATaGGTTTTGATAATGCCCTATGTCGCTTGCAATGTG +
Preference number: 4 (lower is better)
Translates to: SLGSIHFVPGSE*VLIMPYVACNV
Trigger: CACATTGCAAGCGACATAGGGCATTATCAAAACCAATTCAGAGCCTGGCACAAAATGTATACTTCCTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CAA 72 bp CGCCAACACTGTAAAACATGTTTGCTTGAGCAAGAATaGATATTGACTCCGATTGCAGGGAGTAAGCTTGAT +
Preference number: 4 (lower is better)
Translates to: RQHCKTCLLEQE*ILTPIAGSKLD
Trigger: ATCAAGCTTACTCCCTGCAATCGGAGTCAATATCAATTCTTGCTCAAGCAAACATGTTTTACAGTGTTGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACGCGTTTCCTCAATCATaGATCACACTGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHAFPQS*ITLTPQ
Trigger: CTGTGGAGTCAGTGTGATTCATGATTGAGGAAACGC...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCCAAAGTTTGGCTCATTaGGCCATTTGGAGTTGTACT +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAQSLAH*AIWSCT
Trigger: AGTACAACTCCAAATGGCTCAATGAGCCAAACTTTG...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCCAAAGTTTGGCTCATTaGGCCATTTGGAGTTGTACT +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETQSLAH*AIWSCT
Trigger: AGTACAACTCCAAATGGCTCAATGAGCCAAACTTTG...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCTCATGTGGAACATGTTaGACTCTCCACACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLASCGTC*TLHTFS
Trigger: AGAAAAGGTGTGGAGAGTTCAACATGTTCCACATGA...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTGGCTTGAAATGCACTTaGAATGTATCCAAACTTCGA +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSGLKCT*NVSKLR
Trigger: TCGAAGTTTGGATACATTTCAAGTGCATTTCAAGCC...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCGACACTCTGGTGGCTTaGAATGCACTTGAAATGTAT +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETDTLVA*NALEMY
Trigger: ATACATTTCAAGTGCATTTCAAGCCACCAGAGTGTC...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCTTGGGCAATCCATGGTaGATAATTGTTTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLALGNPW*IIVWPH
Trigger: ATGTGGCCAAACAATTATTCACCATGGATTGCCCAA...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGTCATCCCAAACCACATaGCATGAACGGACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMSSQTT*HERTLP
Trigger: AGGAAGAGTCCGTTCATGTCATGTGGTTTGGGATGA...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAATCCAGAGCCATCTCTTaGGATAGAAATGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLESRAIS*DRNAEV
Trigger: GACCTCAGCATTTCTATCTCAAGAGATGGCTCTGGA...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGATTCCTCCTTTGATTTaGCTTTGCTGTAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWIPPLI*LCCNRP
Trigger: AGGCCTGTTACAGCAAAGGCAAATCAAAGGAGGAAT...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAAGGAGAGGAGGTAAAATaGCTAGGCTTCGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLEGEEVK*LGFGKW
Trigger: CCATTTACCGAAGCCTAGGCATTTTACCTCCTCTCC...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCGTTGTTTTTGTTAAATaGCTTGATGGCCTCCACCGA +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETVVFVK*LDGLHR
Trigger: TCGGTGGAGGCCATCAAGGCATTTAACAAAAACAAC...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGAATATTATGGACCTATaGACTTCTTGTGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMNIMDL*TSCGRS
Trigger: GCTCCTTCCACAAGAAGTGCATAGGTCCATAATATT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGAGTTTTGCAGCAACCTaGAGAACACATCCACGCTTC +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMSFAAT*RTHPRF
Trigger: GAAGCGTGGATGTGTTCTGCAGGTTGCTGCAAAACT...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACTCCCATTCCACAGCCTaGATAAGAGACAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHSHSTA*IRDRSS
Trigger: TGAGGATCTGTCTCTTATCCAGGCTGTGGAATGGGA...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCAAAATGTTGCATTCCTaGTATTCCAGAGATGGGCCA +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETKMLHS*YSRDGP
Trigger: TGGCCCATCTCTGGAATACCAGGAATGCAACATTTT...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGCTTCCCAGTGAGATGTaGGTTGAAGTATTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMLPSEM*VEVFVS
Trigger: AGAAACAAATACTTCAACCCACATCTCACTGGGAAG...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTAGCTTTATCCAGATTTaGAAAGTTGGGCAATCCATG +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSSFIQI*KVGQSM
Trigger: CATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTCCAGTTGCCACAATTaGTGTCTTAAGCTGATTTCA +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSSSCHN*CLKLIS
Trigger: TGAAATCAGCTTAAGACACCAATTGTGGCAACTGGA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGTCCGATGTCATAAGATaGCACAAAGTTTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWSDVIR*HKVWLI
Trigger: AATGAGCCAAACTTTGTGTCATCTTATGACATCGGA...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACCTCAGAGGCATCAGATaGACTTTTTCAGTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHLRGIR*TFSVVF
Trigger: GAACACGACTGAAAAAGTTCATCTGATGCCTCTGAG...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCCCACTGCAAAGACCCTaGATGTCATTAATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETPLQRP*MSLIQN
Trigger: ATTTTGGATTAATGACATTCAGGGTCTTTGCAGTGG...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGAGAAACACAAAAGAGTaGTTTTCTACCTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMRNTKE*FSTSSF
Trigger: GAAAGAGGAGGTAGAAAATCACTCTTTTGTGTTTCT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTACAGTCATGCTCTACTaGATTTTCTCGGAAAAAGAA +
Preference number: 4 (lower is better)
Translates to: QDFITCSEASDELFQSCSTVMLY*IFSEKE
Trigger: TTCTTTTTCCGAGAAAATGCAGTAGAGCATGACTGT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGGTTGTTTTTGTTAAATaGCTTGATGGCCTCCACCGA +
Preference number: 4 (lower is better)
Translates to: KFKISNCLQAYQGLKLALVVFVK*LDGLHR
Trigger: TCGGTGGAGGCCATCAAGGCATTTAACAAAAACAAC...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGGTGGTAGGGGCTGATTaGCACACATTGGGTATATCA +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQVVGAD*HTLGIS
Trigger: TGATATACCCAATGTGTGGCAATCAGCCCCTACCAC...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCTGCTTTGTTTCAAAGTaGAGAGGTTCAGCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETCFVSK*RGSACF
Trigger: AAAGCAAGCTGAACCTCTGCACTTTGAAACAAAGCA...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGGAGGTGATTCACAAGTaGAAGGAGAGAGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQEVIHK*KEREDG
Trigger: TCCATCCTCTCTCTCCTTGCACTTGTGAATCACCTC...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652226.1
CDS-3UTR CCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCTTTATAGGAGATGACTaGATGCTCGGTTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTFIGDD*MLGSLA
Trigger: TGCCAGAGAACCGAGCATCCAGTCATCTCCTATAAA...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACTTTATAGGAGATGACTaGATGCTCGGTTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHFIGDD*MLGSLA
Trigger: TGCCAGAGAACCGAGCATCCAGTCATCTCCTATAAA...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGTTGGTGTTGCAAGACTaGTACTCCACATTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQLVLQD*YSTLQP
Trigger: AGGCTGCAATGTGGAGTACCAGTCTTGCAACACCAA...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCAGCTTTATCCAGATTTaGAAAGTTGGGCAATCCATG +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLASFIQI*KVGQSM
Trigger: CATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCCTGATTGCCACACATTaGGTATATCAGAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETLIATH*VYQRDE
Trigger: TTCATCTCTCTGATATACCCAATGTGTGGCAATCAG...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCAGCAAATATGAAGGGGTaGAATAAATTTTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPANMKG*NKFSCL
Trigger: CAAGCAAGAAAATTTATTCCACCCCTTCATATTTGC...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CAA 72 bp CACTGTAAAACATGTTTGCTTGAGCAAGAATTGATATaGACTCCGATTGCAGGGAGTAAGCTTGATTGCCTT +
Preference number: 4 (lower is better)
Translates to: HCKTCLLEQELI*TPIAGSKLDCL
Trigger: AAGGCAATCAAGCTTACTCCCTGCAATCGGAGTCAATATCAATTCTTGCTCAAGCAAACATGTTTTACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CAA 72 bp GTGCTTTGTTTCAAAGTGCAGAGGTTCAGCTTGCTTTaGGCCAACAGTCATGGTAAAAGAGAAAAACAATCA +
Preference number: 4 (lower is better)
Translates to: VLCFKVQRFSLL*ANSHGKREKQS
Trigger: TGATTGTTTTTCTCTTTTACCATGACTGTTGGCCAAAAGCAAGCTGAACCTCTGCACTTTGAAACAAAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
3UTR CAA 72 bp CATACTGTGCTTTGTTTCAAAGTGCAGAGGTTCAGCTaGCTTTTGGCCAACAGTCATGGTAAAAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: HTVLCFKVQRFS*LLANSHGKREK
Trigger: TTTTTCTCTTTTACCATGACTGTTGGCCAAAAGCAAGCTGAACCTCTGCACTTTGAAACAAAGCACAGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCTTGGGCAATCCATGGTaGATAATTGTTTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTLGNPW*IIVWPH
Trigger: ATGTGGCCAAACAATTATTCACCATGGATTGCCCAA...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACACTGAGTATGGACTTTaGGCATGTGCATATAGACAG +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHTEYGL*ACAYRQ
Trigger: CTGTCTATATGCACATGCTCAAAGTCCATACTCAGT...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCAAATTGCCAAAAGGCTaGGAAAGAACAAGATCACAT +
Preference number: 4 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETKLPKG*ERTRSH
Trigger: ATGTGATCTTGTTCTTTCTCAGCCTTTTGGCAATTT...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACGCATTTTCTTGCAGATaGTGTAGAATCTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHAFSCR*CRISVV
Trigger: CACCACTGAGATTCTACATCATCTGCAAGAAAATGC...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGTTCAAATGTAAGGATTaGAAGAAAGTGTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWFKCKD*KKVWCV
Trigger: GACACACCACACTTTCTTTCAATCCTTACATTTGAA...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACCCTTTGATTTGCCTTTaGTGTAACAGGCCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHPLICL*CNRPFW
Trigger: CCAAAAAGGCCTGTTACAGCAAAGGCAAATCAAAGG...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGTACGCTACTGGATCTTaGCACAGATACTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQYATGS*HRYFWD
Trigger: ATCCCAGAAGTATCTGTGGCAAGATCCAGTAGCGTA...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACCAGGACTTTATCACATaGTCAGAGGCATCAGATGAA +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHQDFIT*SEASDE
Trigger: TTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGAAAGACCAGCTTCGATaGCATTTAGAAACCATTTCC +
Preference number: 4 (lower is better)
Translates to: KFKISNCLQAYQGLKLALKDQLR*HLETIS
Trigger: GGAAATGGTTTCTAAATGGCATCGAAGCTGGTCTTT...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGATCTTACATTGTGCATaGCATTCCCTTTTATGCGTT +
Preference number: 4 (lower is better)
Translates to: MVMQSLLILSTISTCCLWILHCA*HSLLCV
Trigger: AACGCATAAAAGGGAATGCCATGCACAATGTAAGAT...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGATGTTGTACCTATTCTaGTTCTACATCCCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMMLYLF*FYIPSE
Trigger: CTCACTGGGGATGTAGAACCAGAATAGGTACAACAT...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACTTAAATGCTTATCGATaGTCAGTGAAGAGACCACAG +
Preference number: 4 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHLNAYR*SVKRPQ
Trigger: CTGTGGTCTCTTCACTGATCATCGATAAGCATTTAA...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR TCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAACCACTGCAAAGACCCTaGATGTCATTAATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLEPLQRP*MSLIQN
Trigger: ATTTTGGATTAATGACATTCAGGGTCTTTGCAGTGG...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR TCA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGATGTCGCTTGCAATGTaGACTCTATTTTCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: KFKISNCLQAYQGLKLALMSLAM*TLFSKV
Trigger: CACTTTTGAAAATAGAGTTCACATTGCAAGCGACAT...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR GCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGATTCCTCCTTTGATTTaGCTTTGCTGTAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQIPPLI*LCCNRP
Trigger: AGGCCTGTTACAGCAAAGGCAAATCAAAGGAGGAAT...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCCTTCCCAGTGAGATGTaGGTTGAAGTATTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTLPSEM*VEVFVS
Trigger: AGAAACAAATACTTCAACCCACATCTCACTGGGAAG...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCTCCTTCCAATGTGGGTaGCACATTTATAAAATAATG +
Preference number: 4 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLASFQCG*HIYKIM
Trigger: CATTATTTTATAAATGTGCCACCCACATTGGAAGGA...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR GCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGAAAGACCAGCTTCGATaGCATTTAGAAACCATTTCC +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQKDQLR*HLETIS
Trigger: GGAAATGGTTTCTAAATGGCATCGAAGCTGGTCTTT...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CCA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAATGCCACAGATACTTCTaGGATGAAATTAGAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLECHRYF*DEIRVK
Trigger: TTTGACTCTAATTTCATCCCAGAAGTATCTGTGGCA...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGTCCTTCCAATGTGGGTaGCACATTTATAAAATAATG +
Preference number: 4 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMSFQCG*HIYKIM
Trigger: CATTATTTTATAAATGTGCCACCCACATTGGAAGGA...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CCA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGCTCTATTTTCAAAAGTaGATAGGATTCCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQLYFQK*IGFPSS
Trigger: TGAGGAAGGGAATCCTATCCACTTTTGAAAATAGAG...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS CCA 90 bp TGGCAAAGTTGGGTGTCCAAGCCAGCTCCGCGGGGCAGTCCTGGGTaGGAGAAGGGAGCGTCCCGGGATGAGCGACACTGGCCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: WQSWVSKPAPRGSPG*EKGASRDERHWPGR
Trigger: GCGGCCCGGCCAGTGTCGCTCATCCCGGGACGCTCCCTTCTCCCACCCAGGACTGCCCCGCGGAGCTGGCTTGGACACCCAACTTTGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp TTGGCGATCTCCATGCCAGGGCCCTCGCACTGCCAGCCACCACACTaGGGGGCCGGGCTGTCGCAGGAGCGGGTTCGACAGAGGCAGGAT +
Preference number: 5 (lower is better)
Translates to: LAISMPGPSHCQPPH*GAGLSQERVRQRQD
Trigger: ATCCTGCCTCTGTCGAACCCGCTCCTGCGACAGCCCGGCCCCGCAGTGTGGTGGCTGGCAGTGCGAGGGCCCTGGCATGGAGATCGCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp CCGTTCCTGGAACAGTTGGCGATCTCCATGCCAGGGCCCTCGCACTaGCAGCCACCACACTGCGGGGCCGGGCTGTCGCAGGAGCGGGTT +
Preference number: 5 (lower is better)
Translates to: PFLEQLAISMPGPSH*QPPHCGAGLSQERV
Trigger: AACCCGCTCCTGCGACAGCCCGGCCCCGCAGTGTGGTGGCTGGCAGTGCGAGGGCCCTGGCATGGAGATCGCCAACTGTTCCAGGAACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 90 bp GCCAGAGCGGCTCCGAGGATCCTCTTCAGCACCTGGCTAGGGAAGTaGAGGCAGCAGCTGCAGCCGCCCCCTGCCACTTCCCCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: ARAAPRILFSTWLGK*RQQLQPPPATSPEP
Trigger: CGGCTCTGGGGAAGTGGCAGGGGGCGGCTGCAGCTGCTGCCTCCACTTCCCTAGCCAGGTGCTGAAGAGGATCCTCGGAGCCGCTCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 90 bp GGGCAGGTTCGCGCCCAGCAGAGACGACCCTCGAGGTGGCAAAGTTaGGTGTCCAAGCCAGCTCCGCGGGGCAGTCCTGGGTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GQVRAQQRRPSRWQS*VSKPAPRGSPGWEK
Trigger: CTTCTCCCACCCAGGACTGCCCCGCGGAGCTGGCTTGGACACCCAACTTTGCCACCTCGAGGGTCGTCTCTGCTGGGCGCGAACCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp CCGTGGTGTTCCCGGAGCACTGGCTGCCCATGGGGAACAGGAGGATaGACTGGCGGGCGCGGACTTGGACGCCAGAGGCTTCACACTCAG +
Preference number: 5 (lower is better)
Translates to: PWCSRSTGCPWGTGG*TGGRGLGRQRLHTQ
Trigger: CTGAGTGTGAAGCCTCTGGCGTCCAAGTCCGCGCCCGCCAGTGCATCCTCCTGTTCCCCATGGGCAGCCAGTGCTCCGGGAACACCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp CAAACACACACGGCCGGCTCTCCGTGGTGTTCCCGGAGCACTGGCTaGCCATGGGGAACAGGAGGATGCACTGGCGGGCGCGGACTTGGA +
Preference number: 5 (lower is better)
Translates to: QTHTAGSPWCSRSTG*PWGTGGCTGGRGLG
Trigger: TCCAAGTCCGCGCCCGCCAGTGCATCCTCCTGTTCCCCATGGGCAGCCAGTGCTCCGGGAACACCACGGAGAGCCGGCCGTGTGTGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 90 bp GAGTCAAACACACACGGCCGGCTCTCCGTGGTGTTCCCGGAGCACTaGCTGCCCATGGGGAACAGGAGGATGCACTGGCGGGCGCGGACT +
Preference number: 5 (lower is better)
Translates to: ESNTHGRLSVVFPEH*LPMGNRRMHWRART
Trigger: AGTCCGCGCCCGCCAGTGCATCCTCCTGTTCCCCATGGGCAGCCAGTGCTCCGGGAACACCACGGAGAGCCGGCCGTGTGTGTTTGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp TTGACCACGTGCTCCCGCAGGCCCACGAACAGGACACTCTGGCTGTaGAGGATCTGCAGGCTCCTGATGGGCTCCCTCCGCCTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LTTCSRRPTNRTLWL*RICRLLMGSLRLSG
Trigger: CCCTGAGAGGCGGAGGGAGCCCATCAGGAGCCTGCAGATCCTGCACAGCCAGAGTGTCCTGTTCGTGGGCCTGCGGGAGCACGTGGTCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp GGCTGTCGCAGGAGCGGGTTCGACAGAGGCAGGATCCCACGGCGCTaGCATCTGTGTGCGTGCAAGGCGTCCACGGAGACCACACACCAA +
Preference number: 5 (lower is better)
Translates to: GCRRSGFDRGRIPRR*HLCACKASTETTHQ
Trigger: TTGGTGTGTGGTCTCCGTGGACGCCTTGCACGCACACAGATGGCAGCGCCGTGGGATCCTGCCTCTGTCGAACCCGCTCCTGCGACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 90 bp GGGATCTTGACCACGTGCTCCCGCAGGCCCACGAACAGGACACTCTaGCTGTGCAGGATCTGCAGGCTCCTGATGGGCTCCCTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: GILTTCSRRPTNRTL*LCRICRLLMGSLRL
Trigger: GAGGCGGAGGGAGCCCATCAGGAGCCTGCAGATCCTGCACAGCCAGAGTGTCCTGTTCGTGGGCCTGCGGGAGCACGTGGTCAAGATCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 90 bp TGGCTGCCCATGGGGAACAGGAGGATGCACTGGCGGGCGCGGACTTaGACGCCAGAGGCTTCACACTCAGACCAGTCCGACCACTCCGAC +
Preference number: 5 (lower is better)
Translates to: WLPMGNRRMHWRART*TPEASHSDQSDHSD
Trigger: GTCGGAGTGGTCGGACTGGTCTGAGTGTGAAGCCTCTGGCGTCCAAGTCCGCGCCCGCCAGTGCATCCTCCTGTTCCCCATGGGCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 90 bp GTGTTCCCGGAGCACTGGCTGCCCATGGGGAACAGGAGGATGCACTaGCGGGCGCGGACTTGGACGCCAGAGGCTTCACACTCAGACCAG +
Preference number: 5 (lower is better)
Translates to: VFPEHWLPMGNRRMH*RARTWTPEASHSDQ
Trigger: CTGGTCTGAGTGTGAAGCCTCTGGCGTCCAAGTCCGCGCCCGCCAGTGCATCCTCCTGTTCCCCATGGGCAGCCAGTGCTCCGGGAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp TGCTCCCGCAGGCCCACGAACAGGACACTCTGGCTGTGCAGGATCTaGAGGCTCCTGATGGGCTCCCTCCGCCTCTCAGGGAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: CSRRPTNRTLWLCRI*RLLMGSLRLSGKSS
Trigger: TGAGCTCTTCCCTGAGAGGCGGAGGGAGCCCATCAGGAGCCTGCAGATCCTGCACAGCCAGAGTGTCCTGTTCGTGGGCCTGCGGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp GGGTTCGACAGAGGCAGGATCCCACGGCGCTGCCATCTGTGTGCGTaGAAGGCGTCCACGGAGACCACACACCAAAGTGCCCATCCACGG +
Preference number: 5 (lower is better)
Translates to: GFDRGRIPRRCHLCA*KASTETTHQSAHPR
Trigger: CCGTGGATGGGCACTTTGGTGTGTGGTCTCCGTGGACGCCTTGCACGCACACAGATGGCAGCGCCGTGGGATCCTGCCTCTGTCGAACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp GAGCGGGTTCGACAGAGGCAGGATCCCACGGCGCTGCCATCTGTGTaGGTGCAAGGCGTCCACGGAGACCACACACCAAAGTGCCCATCC +
Preference number: 5 (lower is better)
Translates to: ERVRQRQDPTALPSV*VQGVHGDHTPKCPS
Trigger: GGATGGGCACTTTGGTGTGTGGTCTCCGTGGACGCCTTGCACGCACACAGATGGCAGCGCCGTGGGATCCTGCCTCTGTCGAACCCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 90 bp CAGCCTGCACAGTCAGGCCCATTCTCACAGATCCTGCGGCGAGCTTaGATGCCACCCCCGCATTGGGCTGTGCACCGTTCCCAAGGACCC +
Preference number: 5 (lower is better)
Translates to: QPAQSGPFSQILRRA*MPPPHWAVHRSQGP
Trigger: GGGTCCTTGGGAACGGTGCACAGCCCAATGCGGGGGTGGCATTCAAGCTCGCCGCAGGATCTGTGAGAATGGGCCTGACTGTGCAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 90 bp CACGGCTGCACTGTGACCACGACGTCCAGGCTGACCAAGCCCCGTTaGCCGTGTGGGCAGAGTATCTCCCAGCACGCAGGAAATCCCCAG +
Preference number: 5 (lower is better)
Translates to: HGCTVTTTSRLTKPR*PCGQSISQHAGNPQ
Trigger: CTGGGGATTTCCTGCGTGCTGGGAGATACTCTGCCCACACGGTCAACGGGGCTTGGTCAGCCTGGACGTCGTGGTCACAGTGCAGCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp CACAGATCCTGCGGCGAGCTTGAATGCCACCCCCGCATTGGGCTGTaGACCGTTCCCAAGGACCCCAGCCTGTCCAGAACATGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: HRSCGELECHPRIGL*TVPKDPSLSRTCVG
Trigger: CCCCACACATGTTCTGGACAGGCTGGGGTCCTTGGGAACGGTGCACAGCCCAATGCGGGGGTGGCATTCAAGCTCGCCGCAGGATCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp CTGCACAGTCAGGCCCATTCTCACAGATCCTGCGGCGAGCTTGAATaGCACCCCCGCATTGGGCTGTGCACCGTTCCCAAGGACCCCAGC +
Preference number: 5 (lower is better)
Translates to: LHSQAHSHRSCGELE*HPRIGLCTVPKDPS
Trigger: GCTGGGGTCCTTGGGAACGGTGCACAGCCCAATGCGGGGGTGGCATTCAAGCTCGCCGCAGGATCTGTGAGAATGGGCCTGACTGTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 90 bp AGGTGCTGCGTGTGCGGTAGAACTGGCACCTCTTCAGGGGGATCTTaGCCACGTGCTCCCGCAGGCCCACGAACAGGACACTCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: RCCVCGRTGTSSGGS*PRAPAGPRTGHSGC
Trigger: ACAGCCAGAGTGTCCTGTTCGTGGGCCTGCGGGAGCACGTGGTCAAGATCCCCCTGAAGAGGTGCCAGTTCTACCGCACACGCAGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp GCCGAGCGCGAGTTTTCTTGGTACTTGAAGGGCCCAGAGAAGGCCTaGGCGATGGCGCTCAGGTTGAAGACGCACACAGCTGAGGCCGCA +
Preference number: 5 (lower is better)
Translates to: AEREFSWYLKGPEKA*AMALRLKTHTAEAA
Trigger: TGCGGCCTCAGCTGTGTGCGTCTTCAACCTGAGCGCCATCGCGCAGGCCTTCTCTGGGCCCTTCAAGTACCAAGAAAACTCGCGCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp TGGGTTCGGGGTTGTTGCAAACACGCTTCCGGTTCCGAATGCCCCTaGTGCAGTCACGGCTGCACTGTGACCACGACGTCCAGGCTGACC +
Preference number: 5 (lower is better)
Translates to: WVRGCCKHASGSECP*CSHGCTVTTTSRLT
Trigger: GGTCAGCCTGGACGTCGTGGTCACAGTGCAGCCGTGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCCGAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 90 bp GGGTTTGGGTTGGGATACGGTAGCCAGGCCGAGCGCGAGTTTTCTTaGTACTTGAAGGGCCCAGAGAAGGCCTGCGCGATGGCGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GFGLGYGSQAEREFS*YLKGPEKACAMALR
Trigger: CCTGAGCGCCATCGCGCAGGCCTTCTCTGGGCCCTTCAAGTACCAAGAAAACTCGCGCTCGGCCTGGCTACCGTATCCCAACCCAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp GTTCGGGGTTGTTGCAAACACGCTTCCGGTTCCGAATGCCCCTGCTaGAGTCACGGCTGCACTGTGACCACGACGTCCAGGCTGACCAAG +
Preference number: 5 (lower is better)
Translates to: VRGCCKHASGSECPC*SHGCTVTTTSRLTK
Trigger: CTTGGTCAGCCTGGACGTCGTGGTCACAGTGCAGCCGTGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCCGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 90 bp CACTGTGACCACGACGTCCAGGCTGACCAAGCCCCGTTGACCGTGTaGGCAGAGTATCTCCCAGCACGCAGGAAATCCCCAGAAAGCCCA +
Preference number: 5 (lower is better)
Translates to: HCDHDVQADQAPLTV*AEYLPARRKSPESP
Trigger: TGGGCTTTCTGGGGATTTCCTGCGTGCTGGGAGATACTCTGCCCACACGGTCAACGGGGCTTGGTCAGCCTGGACGTCGTGGTCACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp CCATCTGTGTGCGTGCAAGGCGTCCACGGAGACCACACACCAAAGTaGCCATCCACGGTGAGATTCCTGGTCGGACACGCAGAGATGCTC +
Preference number: 5 (lower is better)
Translates to: PSVCVQGVHGDHTPK*PSTVRFLVGHAEML
Trigger: GAGCATCTCTGCGTGTCCGACCAGGAATCTCACCGTGGATGGGCACTTTGGTGTGTGGTCTCCGTGGACGCCTTGCACGCACACAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp CATACTTGGGTTCGGGGTTGTTGCAAACACGCTTCCGGTTCCGAATaGCCCTGCTGCAGTCACGGCTGCACTGTGACCACGACGTCCAGG +
Preference number: 5 (lower is better)
Translates to: HTWVRGCCKHASGSE*PCCSHGCTVTTTSR
Trigger: CCTGGACGTCGTGGTCACAGTGCAGCCGTGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCCGAACCCAAGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp CACTGTAAGGCCTGCCTCCCACAGCCCTGTGATGTTCAACTCTTCTaGCGCGGGACTCCCATGTGGCTTTGTGTGGTGTGTGCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: HCKACLPQPCDVQLF*RGTPMWLCVVCAVL
Trigger: GAGGACCGCACACACCACACAAAGCCACATGGGAGTCCCGCGGCAGAAGAGTTGAACATCACAGGGCTGTGGGAGGCAGGCCTTACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514923.4
CDS-3UTR CAA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGCTGGCGGGCGCGGACTaGGACGCCAGAGGCTTCACA +
Preference number: 5 (lower is better)
Translates to: PAEEQLENHPARFPLLSMLAGAD*DARGFT
Trigger: TGTGAAGCCTCTGGCGTCCAAGTCCGCGCCCGCCAG...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 90 bp GGAGCAAGAGCGGGTCCTCATATAGTGTCCACCGCCGCATGTTGCTaGACATTTTGTCCAGGGGGACCAGCAAGACCACACGCCATCCAC +
Preference number: 5 (lower is better)
Translates to: GARAGPHIVSTAACC*TFCPGGPARPHAIH
Trigger: GTGGATGGCGTGTGGTCTTGCTGGTCCCCCTGGACAAAATGTTCAGCAACATGCGGCGGTGGACACTATATGAGGACCCGCTCTTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 90 bp TCCAGGGTGTCCAGGGCGTGGTCTTCTTCAGCTCAGGACACGGGTTaGTGTTGCAAGACTGGTACTCCACATTGCAGCCTGCACAGTCAG +
Preference number: 5 (lower is better)
Translates to: SRVSRAWSSSAQDTG*CCKTGTPHCSLHSQ
Trigger: CTGACTGTGCAGGCTGCAATGTGGAGTACCAGTCTTGCAACACCAACCCGTGTCCTGAGCTGAAGAAGACCACGCCCTGGACACCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 90 bp CCTGGTATTCCAGAGATGGGCCAAGGCAAGGCATTCCCCCATACTTaGGTTCGGGGTTGTTGCAAACACGCTTCCGGTTCCGAATGCCCC +
Preference number: 5 (lower is better)
Translates to: PGIPEMGQGKAFPHT*VRGCCKHASGSECP
Trigger: GGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCCGAACCCAAGTATGGGGGAATGCCTTGCCTTGGCCCATCTCTGGAATACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 90 bp GGAGAGAGAGGATGGAGGACGCGTTTCCTCAATCATGAATCACACTaGCTCCACAGCCACGTGGGCACTCCAGCCCAAGTCTCACACACC +
Preference number: 5 (lower is better)
Translates to: GERGWRTRFLNHESH*LHSHVGTPAQVSHT
Trigger: GGTGTGTGAGACTTGGGCTGGAGTGCCCACGTGGCTGTGGAGTCAGTGTGATTCATGATTGAGGAAACGCGTCCTCCATCCTCTCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 90 bp CTGTGGAATTGTGCTGGGGACTGTAGGGACAGCGGGCCATGCCACTaGTCTGATCATGGATCTCAGTCAGGTTGCTCAACGAGCGGTTGG +
Preference number: 5 (lower is better)
Translates to: LWNCAGDCRDSGPCH*SDHGSQSGCSTSGW
Trigger: CCAACCGCTCGTTGAGCAACCTGACTGAGATCCATGATCAGATCAGTGGCATGGCCCGCTGTCCCTACAGTCCCCAGCACAATTCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382496.10
ENST00000513968.4
ENST00000514923.4
ENST00000652226.1
CDS CCA 90 bp GGACGCGTTTCCTCAATCATGAATCACACTGACTCCACAGCCACGTaGGCACTCCAGCCCAAGTCTCACACACCAACACAGGTGCGAGGA +
Preference number: 5 (lower is better)
Translates to: GRVSSIMNHTDSTAT*ALQPKSHTPTQVRG
Trigger: TCCTCGCACCTGTGTTGGTGTGTGAGACTTGGGCTGGAGTGCCCACGTGGCTGTGGAGTCAGTGTGATTCATGATTGAGGAAACGCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAAATGGGGGCACCGGCTaGGGGGCCACGAGCACGGTC +
Preference number: 5 (lower is better)
Translates to: SERQHEVPTAKTLNVINPNGGTG*GATSTV
Trigger: GACCGTGCTCGTGGCCCCCAAGCCGGTGCCCCCATT...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGCCACCAATATCGTTCTaGCACACCCGGGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKPPISF*HTRAAL
Trigger: CAGAGCTGCCCGGGTGTGCAAGAACGATATTGGTGG...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGGCTGACCAAGCCCCGTaGACCGTGTGGGCAGAGTAT +
Preference number: 5 (lower is better)
Translates to: PAEEQLENHPARFPLLSMADQAP*TVWAEY
Trigger: ATACTCTGCCCACACGGTCAACGGGGCTTGGTCAGC...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 90 bp AAAGTGCCAAGGAGAGAGAGGATGGAGGACGCGTTTCCTCAATCATaGATCACACTGACTCCACAGCCACGTGGGCACTCCAGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: KVPRRERMEDAFPQS*ITLTPQPRGHSSPS
Trigger: ACTTGGGCTGGAGTGCCCACGTGGCTGTGGAGTCAGTGTGATTCATGATTGAGGAAACGCGTCCTCCATCCTCTCTCTCCTTGGCACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS TCA 90 bp ACAAGTGCAAGGAGAGAGAGGATGGAGGACGCGTTTCCTCAATCATaGATCACACTGACTCCACAGCCACGTGGGCACTCCAGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: TSARRERMEDAFPQS*ITLTPQPRGHSSPS
Trigger: ACTTGGGCTGGAGTGCCCACGTGGCTGTGGAGTCAGTGTGATTCATGATTGAGGAAACGCGTCCTCCATCCTCTCTCTCCTTGCACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652226.1
CDS GCA 90 bp ACGGTGAGATTCCTGGTCGGACACGCAGAGATGCTCTGTTCCCACTaGGTCATGCTCAGGCTCTCCTCCAGGCTTGTGCATTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: TVRFLVGHAEMLCSH*VMLRLSSRLVHFFI
Trigger: AATGAAGAAATGCACAAGCCTGGAGGAGAGCCTGAGCATGACGCAGTGGGAACAGAGCATCTCTGCGTGTCCGACCAGGAATCTCACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 90 bp TCTGTCTTCCCACTTCCAGCAAATTCGGATCAGCCAGGCGGGCTTTaGATGTGTATCGGAATCGTTGCTCATAGTGGCCGCCGTTGTCAG +
Preference number: 5 (lower is better)
Translates to: SVFPLPANSDQPGGL*MCIGIVAHSGRRCQ
Trigger: CTGACAACGGCGGCCACTATGAGCAACGATTCCGATACACATGCAAAGCCCGCCTGGCTGATCCGAATTTGCTGGAAGTGGGAAGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 90 bp CAAGACCACACGCCATCCACTGGGCAGGGCAAAATGTTGCATTCCTaGTATTCCAGAGATGGGCCAAGGCAAGGCATTCCCCCATACTTG +
Preference number: 5 (lower is better)
Translates to: QDHTPSTGQGKMLHS*YSRDGPRQGIPPYL
Trigger: CAAGTATGGGGGAATGCCTTGCCTTGGCCCATCTCTGGAATACCAGGAATGCAACATTTTGCCCTGCCCAGTGGATGGCGTGTGGTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTAATGGGGGCACCGGCTaGGGGGCCACGAGCACGGTC +
Preference number: 5 (lower is better)
Translates to: QDFITCSEASDELFQSCSNGGTG*GATSTV
Trigger: GACCGTGCTCGTGGCCCCCAAGCCGGTGCCCCCATT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCCCGTTGTCAGAGATGTaGACAGGTGTCCAGGGTGTC +
Preference number: 5 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSPLSEM*TGVQGV
Trigger: GACACCCTGGACACCTGTCAACATCTCTGACAACGG...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS GCA 90 bp GATTCCTGGTCGGACACGCAGAGATGCTCTGTTCCCACTGCGTCATaGTCAGGCTCTCCTCCAGGCTTGTGCATTTCTTCATTACCACAT +
Preference number: 5 (lower is better)
Translates to: DSWSDTQRCSVPTAS*SGSPPGLCISSLPH
Trigger: ATGTGGTAATGAAGAAATGCACAAGCCTGGAGGAGAGCCTGAGCATGACGCAGTGGGAACAGAGCATCTCTGCGTGTCCGACCAGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGGGACACGGGTTGGTGTaGCAAGACTGGTACTCCACA +
Preference number: 5 (lower is better)
Translates to: PAEEQLENHPARFPLLSMGHGLV*QDWYST
Trigger: TGTGGAGTACCAGTCTTGCAACACCAACCCGTGTCC...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGTGTGTATCGGAATCGTaGCTCATAGTGGCCGCCGTT +
Preference number: 5 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKCVSES*LIVAAV
Trigger: AACGGCGGCCACTATGAGCAACGATTCCGATACACA...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 90 bp CCGCCTCTCAGGGAAGAGCTCAATCTCTTCCAGCAAACAGCTGCTTaGGGTCTGATTCAGGGGTACCCGCACTTTCTTAATGGTTCCGTA +
Preference number: 5 (lower is better)
Translates to: PPLREELNLFQQTAA*GLIQGYPHFLNGSV
Trigger: TACGGAACCATTAAGAAAGTGCGGGTACCCCTGAATCAGACCTCAAGCAGCTGTTTGCTGGAAGAGATTGAGCTCTTCCCTGAGAGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCTTGAGCCATTTGGAGTaGTACTGCGCCGTGCGGAGA +
Preference number: 5 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATLSHLE*YCAVRR
Trigger: TCTCCGCACGGCGCAGTACAACTCCAAATGGCTCAA...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGCGATGGCGCTCAGGTaGAAGACGCACACAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SERQHEVPTAKTLNVINPAMALR*KTHTAE
Trigger: CTCAGCTGTGTGCGTCTTCAACCTGAGCGCCATCGC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGATGTTGCTGAACATTTaGTCCAGGGGGACCAGCAAG +
Preference number: 5 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKMLLNI*SRGTSK
Trigger: CTTGCTGGTCCCCCTGGACAAAATGTTCAGCAACAT...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGAATGCCACCCCCGCATaGGGCTGTGCACCGTTCCCA +
Preference number: 5 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMNATPA*GCAPFP
Trigger: TGGGAACGGTGCACAGCCCAATGCGGGGGTGGCATT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTGGGCAGGGCTGCGTGTaGCAGAGTGCCTCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: QDFITCSEASDELFQSCSGQGCV*QSASSV
Trigger: CACAGAAGAGGCACTCTGCAACACGCAGCCCTGCCC...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCTTTTTGTTAAATGCCTaGATGGCCTCCACCGAGTCG +
Preference number: 5 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSFLLNA*MASTES
Trigger: CGACTCGGTGGAGGCCATCAAGGCATTTAACAAAAA...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGCCGTTCCTGGAACAGTaGGCGATCTCCATGCCAGGG +
Preference number: 5 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMPFLEQ*AISMPG
Trigger: CCCTGGCATGGAGATCGCCAACTGTTCCAGGAACGG...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCAATGCCACCCCCGCATaGGGCTGTGCACCGTTCCCA +
Preference number: 5 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETNATPA*GCAPFP
Trigger: TGGGAACGGTGCACAGCCCAATGCGGGGGTGGCATT...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATACTTGGGTTCGGGGTaGTTGCAAACACGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: SERQHEVPTAKTLNVINPYLGSG*LQTRFR
Trigger: CCGGAAGCGTGTTTGCAACAACCCCGAACCCAAGTA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGTCCACCGCCGCATGTaGCTGAACATTTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SERQHEVPTAKTLNVINPVHRRM*LNILSR
Trigger: CCTGGACAAAATGTTCAGCAACATGCGGCGGTGGAC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACCTGGCGGGCGCGGACTaGGACGCCAGAGGCTTCACA +
Preference number: 5 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHLAGAD*DARGFT
Trigger: TGTGAAGCCTCTGGCGTCCAAGTCCGCGCCCGCCAG...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGAGTCGCATCGTGGGATaGCTGCTGGTACCGCTGGCA +
Preference number: 5 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMSRIVG*LLVPLA
Trigger: TGCCAGCGGTACCAGCAGCAATCCCACGATGCGACT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CAGAAACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTGGGGATTTACAAGGTGCCAGGCTCTGAATaGGTTTTGATAATGCCCTAT +
Preference number: 5 (lower is better)
Translates to: QKHGQSWGTGLEELGIYKVPGSE*VLIMPY
Trigger: ATAGGGCATTATCAAAACCAATTCAGAGCCTGGCAC...CTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCCTCGAGGTGGCAAAGTaGGGTGTCCAAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLALEVAK*GVQASS
Trigger: GGAGCTGGCTTGGACACCCAACTTTGCCACCTCGAG...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCCTCGAGGTGGCAAAGTaGGGTGTCCAAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETLEVAK*GVQASS
Trigger: GGAGCTGGCTTGGACACCCAACTTTGCCACCTCGAG...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCAAGTGGGGGTTTGGGTaGGGATACGGTAGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETKWGFG*GYGSQA
Trigger: GGCCTGGCTACCGTATCCCAACCCAAACCCCCACTT...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGACTGGAAGTGGGGGTTaGGGTTGGGATACGGTAGCC +
Preference number: 5 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMTGSGG*GWDTVA
Trigger: GGCTACCGTATCCCAACCCAAACCCCCACTTCCAGT...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCAGTCCACCGCCGCATGTaGCTGAACATTTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPVHRRM*LNILSR
Trigger: CCTGGACAAAATGTTCAGCAACATGCGGCGGTGGAC...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCTTGCAGGGAGTAAGCTaGATTGCCTTTCTATGGCAG +
Preference number: 5 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATLQGVS*IAFLWQ
Trigger: CTGCCATAGAAAGGCAATCAAGCTTACTCCCTGCAA...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAACAGGCGTGAATGCATaGGTCCCACAGGTGAATAAC +
Preference number: 5 (lower is better)
Translates to: SERQHEVPTAKTLNVINPTGVNA*VPQVNN
Trigger: GTTATTCACCTGTGGGACCAATGCATTCACGCCTGT...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTTGCTCAACGAGCGGTaGGTGCAGACAGGCGTGAAT +
Preference number: 5 (lower is better)
Translates to: QDFITCSEASDELFQSCSLLNER*VQTGVN
Trigger: ATTCACGCCTGTCTGCACCAACCGCTCGTTGAGCAA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCTGGATCTCAGTCAGGTaGCTCAACGAGCGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTWISVR*LNERLV
Trigger: CACCAACCGCTCGTTGAGCAACCTGACTGAGATCCA...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCTTGAGCCATTTGGAGTaGTACTGCGCCGTGCGGAGA +
Preference number: 5 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTLSHLE*YCAVRR
Trigger: TCTCCGCACGGCGCAGTACAACTCCAAATGGCTCAA...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTGGCTCATTGAGCCATTaGGAGTTGTACTGCGCCGTG +
Preference number: 5 (lower is better)
Translates to: QDFITCSEASDELFQSCSGSLSH*ELYCAV
Trigger: CACGGCGCAGTACAACTCCAAATGGCTCAATGAGCC...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAGGCTCTCCTCCAGGCTaGTGCATTTCTTCATTACCA +
Preference number: 5 (lower is better)
Translates to: SERQHEVPTAKTLNVINPGSPPG*CISSLP
Trigger: TGGTAATGAAGAAATGCACAAGCCTGGAGGAGAGCC...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCCATAGCAAATGTTCATaGCAGTATCTTTCCTCGCGG +
Preference number: 5 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATHSKCS*QYLSSR
Trigger: CCGCGAGGAAAGATACTGCAATGAACATTTGCTATG...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAAGATCCTGCGGCGAGCTaGAATGCCACCCCCGCATTG +
Preference number: 5 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLEDPAAS*NATPAL
Trigger: CAATGCGGGGGTGGCATTCAAGCTCGCCGCAGGATC...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACGATCCTGCGGCGAGCTaGAATGCCACCCCCGCATTG +
Preference number: 5 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHDPAAS*NATPAL
Trigger: CAATGCGGGGGTGGCATTCAAGCTCGCCGCAGGATC...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTCAGCCAGGCGGGCTTaGCATGTGTATCGGAATCGT +
Preference number: 5 (lower is better)
Translates to: QDFITCSEASDELFQSCSSARRA*HVYRNR
Trigger: ACGATTCCGATACACATGCAAAGCCCGCCTGGCTGA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCGGGCAGGGCTGCGTGTaGCAGAGTGCCTCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTGQGCV*QSASSV
Trigger: CACAGAAGAGGCACTCTGCAACACGCAGCCCTGCCC...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCACTACGCTACTGGATCTaGCCACAGATACTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: SERQHEVPTAKTLNVINPLRYWI*PQILLG
Trigger: TCCCAGAAGTATCTGTGGCAAGATCCAGTAGCGTAG...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAGCCGAGGAACAATTGGAGAACCATCCGGCTAGATTTCCCCTACTGAGTATGCCAGTGAGATGTGGGTaGAAGTATTTGTTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: PAEEQLENHPARFPLLSMPVRCG*KYLFLS
Trigger: GGAAAGAAACAAATACTTCAACCCACATCTCACTGG...CATACTCAGTAGGGGAAATCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCTTGCTCAACGAGCGGTaGGTGCAGACAGGCGTGAAT +
Preference number: 5 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETLLNER*VQTGVN
Trigger: ATTCACGCCTGTCTGCACCAACCGCTCGTTGAGCAA...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGAGTTTTCTTGGTACTaGAAGGGCCCAGAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMEFSWY*KGPEKA
Trigger: GGCCTTCTCTGGGCCCTTCAAGTACCAAGAAAACTC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCCGAGCGCGAGTTTTCTaGGTACTTGAAGGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETRARVF*VLEGPR
Trigger: TCTGGGCCCTTCAAGTACCAAGAAAACTCGCGCTCG...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTCCAGCAAACAGCTGCTaGAGGTCTGATTCAGGGGTA +
Preference number: 5 (lower is better)
Translates to: QDFITCSEASDELFQSCSPANSC*RSDSGV
Trigger: TACCCCTGAATCAGACCTCAAGCAGCTGTTTGCTGG...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCGGACACGGGTTGGTGTaGCAAGACTGGTACTCCACA +
Preference number: 5 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETGHGLV*QDWYST
Trigger: TGTGGAGTACCAGTCTTGCAACACCAACCCGTGTCC...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCAGCTCAGGACACGGGTaGGTGTTGCAAGACTGGTAC +
Preference number: 5 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETSSGHG*VLQDWY
Trigger: GTACCAGTCTTGCAACACCAACCCGTGTCCTGAGCT...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCTACTTGGGTTCGGGGTaGTTGCAAACACGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAYLGSG*LQTRFR
Trigger: CCGGAAGCGTGTTTGCAACAACCCCGAACCCAAGTA...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCGGCATTCCCCCATACTaGGGTTCGGGGTTGTTGCAA +
Preference number: 5 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETGIPPY*GSGLLQ
Trigger: TTGCAACAACCCCGAACCCAAGTATGGGGGAATGCC...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACAGTCGCATCGTGGGATaGCTGCTGGTACCGCTGGCA +
Preference number: 5 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHSRIVG*LLVPLA
Trigger: TGCCAGCGGTACCAGCAGCAATCCCACGATGCGACT...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCCATCTTGAAATGCTGTaGCCTCCATGCAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTHLEML*PPCRER
Trigger: CCTCTCCCTGCATGGAGGCAACAGCATTTCAAGATG...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCCCAGCCGAGGAACAATaGGAGAACCATCCGGCTAGA +
Preference number: 5 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETPAEEQ*ENHPAR
Trigger: TCTAGCCGGATGGTTCTCCAATTGTTCCTCGGCTGG...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp GTGAACCGCAAAGTTTCACCAGGACTTCCAAACAGCCCAGGCCTAAGGAAGAGCACTATGTGTTGGTTTTaGTTCCACTTGTACCAAGAA +
Preference number: 5 (lower is better)
Translates to: VNRKVSPGLPNSPGLRKSTMCWF*FHLYQE
Trigger: TTCTTGGTACAAGTGGAACAAAAACCAACACATAGT...GCTCTTCCTTAGGCCTGGGCTGTTTGGAAGTCCTGGTGAAACTTTGCGGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGGCGATGGCGCTCAGGTaGAAGACGCACACAGCTGAG +
Preference number: 5 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQAMALR*KTHTAE
Trigger: CTCAGCTGTGTGCGTCTTCAACCTGAGCGCCATCGC...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGAAGTGGGGGTTTGGGTaGGGATACGGTAGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQKWGFG*GYGSQA
Trigger: GGCCTGGCTACCGTATCCCAACCCAAACCCCCACTT...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGCCGTTCCTGGAACAGTaGGCGATCTCCATGCCAGGG +
Preference number: 5 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQPFLEQ*AISMPG
Trigger: CCCTGGCATGGAGATCGCCAACTGTTCCAGGAACGG...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCTGTGTATCGGAATCGTaGCTCATAGTGGCCGCCGTT +
Preference number: 5 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETCVSES*LIVAAV
Trigger: AACGGCGGCCACTATGAGCAACGATTCCGATACACA...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGGGACCTATGCACTTCTaGTGGAAGGAGCAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMGPMHF*WKEQVF
Trigger: AAAGACCTGCTCCTTCCACAAGAAGTGCATAGGTCC...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp TGTAGTGAGGGAGGGTGTTTTTCCCAAGTCATTGCAAAAGACTCATTAAAGACCCACTGCACCCAGCCTTaGTCCATGATTTTGACAGCA +
Preference number: 5 (lower is better)
Translates to: CSEGGCFSQVIAKDSLKTHCTQP*SMILTA
Trigger: TGCTGTCAAAATCATGGACAAAGGCTGGGTGCAGTG...GGTCTTTAATGAGTCTTTTGCAATGACTTGGGAAAAACACCCTCCCTCACTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp CATGGCCCCCTTACAAAGGACCCAGCAATCTACAAGTGTTCTAGCATAGCAACCAATGCCCTATGTCGCTaGCAATGTGAACTCTATTTT +
Preference number: 5 (lower is better)
Translates to: HGPLTKDPAIYKCSSIATNALCR*QCELYF
Trigger: AAAATAGAGTTCACATTGCAAGCGACATAGGGCATT...GGTTGCTATGCTAGAACACTTGTAGATTGCTGGGTCCTTTGTAAGGGGGCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGCCACCAATATCGTTCTaGCACACCCGGGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQPPISF*HTRAAL
Trigger: CAGAGCTGCCCGGGTGTGCAAGAACGATATTGGTGG...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACCGAGCGCGAGTTTTCTaGGTACTTGAAGGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHRARVF*VLEGPR
Trigger: TCTGGGCCCTTCAAGTACCAAGAAAACTCGCGCTCG...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGACTGGAAGTGGGGGTTaGGGTTGGGATACGGTAGCC +
Preference number: 5 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQTGSGG*GWDTVA
Trigger: GGCTACCGTATCCCAACCCAAACCCCCACTTCCAGT...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACCCGTTGTCAGAGATGTaGACAGGTGTCCAGGGTGTC +
Preference number: 5 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHPLSEM*TGVQGV
Trigger: GACACCCTGGACACCTGTCAACATCTCTGACAACGG...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGTCAGCCAGGCGGGCTTaGCATGTGTATCGGAATCGT +
Preference number: 5 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMSARRA*HVYRNR
Trigger: ACGATTCCGATACACATGCAAAGCCCGCCTGGCTGA...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCTTGGGTTCGGGGTTGTaGCAAACACGCTTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTLGSGL*QTRFRF
Trigger: GAACCGGAAGCGTGTTTGCAACAACCCCGAACCCAA...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp ACACAATTAAAAACTTCACACCCTGGCTCATTCAACAATGGTCAAGATTTTCACTTGGGTTCGGGGTTGTaGCAAACACGCTTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: TQLKTSHPGSFNNGQDFHLGSGL*QTRFRF
Trigger: GAACCGGAAGCGTGTTTGCAACAACCCCGAACCCAA...GTGAAAATCTTGACCATTGTTGAATGAGCCAGGGTGTGAAGTTTTTAATTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCGGGCAGGGCAAAATGTaGCATTCCTGGTATTCCAGA +
Preference number: 5 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETGQGKM*HSWYSR
Trigger: TCTGGAATACCAGGAATGCAACATTTTGCCCTGCCC...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCATGTTGCTGAACATTTaGTCCAGGGGGACCAGCAAG +
Preference number: 5 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAMLLNI*SRGTSK
Trigger: CTTGCTGGTCCCCCTGGACAAAATGTTCAGCAACAT...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCAATCATGTGGAACATGTaGAACTCTCCACACCTTTTC +
Preference number: 5 (lower is better)
Translates to: SERQHEVPTAKTLNVINPIMWNM*NSPHLF
Trigger: GAAAAGGTGTGGAGAGTTCAACATGTTCCACATGAT...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCGGACCTATGCACTTCTaGTGGAAGGAGCAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAGPMHF*WKEQVF
Trigger: AAAGACCTGCTCCTTCCACAAGAAGTGCATAGGTCC...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTGCTTCCCCACTAGACTaGTTCCAAATGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: QDFITCSEASDELFQSCSASPLD*FQMAFL
Trigger: CAAGAAAGCCATTTGGAACAAGTCTAGTGGGGAAGC...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652226.1
CDS-3UTR CAA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGTGGATCTCAGTCAGGTaGCTCAACGAGCGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQWISVR*LNERLV
Trigger: CACCAACCGCTCGTTGAGCAACCTGACTGAGATCCA...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGGGCTCATTGAGCCATTaGGAGTTGTACTGCGCCGTG +
Preference number: 5 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQGSLSH*ELYCAV
Trigger: CACGGCGCAGTACAACTCCAAATGGCTCAATGAGCC...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp GAAGTCACCTCTCTTCTGAGCATATGTTGTACCTATTCTGGTTCTACATCCCCAACAAAGTTTGGCTCATaGAGCCATTTGGAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: EVTSLLSICCTYSGSTSPTKFGS*SHLELY
Trigger: GTACAACTCCAAATGGCTCAATGAGCCAAACTTTGT...TGGGGATGTAGAACCAGAATAGGTACAACATATGCTCAGAAGAGAGGTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGCATAGCAAATGTTCATaGCAGTATCTTTCCTCGCGG +
Preference number: 5 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMHSKCS*QYLSSR
Trigger: CCGCGAGGAAAGATACTGCAATGAACATTTGCTATG...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGAGCTCAGGACACGGGTaGGTGTTGCAAGACTGGTAC +
Preference number: 5 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQSSGHG*VLQDWY
Trigger: GTACCAGTCTTGCAACACCAACCCGTGTCCTGAGCT...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCTTTTTGTTAAATGCCTaGATGGCCTCCACCGAGTCG +
Preference number: 5 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAFLLNA*MASTES
Trigger: CGACTCGGTGGAGGCCATCAAGGCATTTAACAAAAA...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATGGCTTGAAATGCACTaGAAATGTATCCAAACTTCG +
Preference number: 5 (lower is better)
Translates to: SERQHEVPTAKTLNVINPWLEMH*KCIQTS
Trigger: CGAAGTTTGGATACATTTCAAGTGCATTTCAAGCCA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGCATCTTGAAATGCTGTaGCCTCCATGCAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMHLEML*PPCRER
Trigger: CCTCTCCCTGCATGGAGGCAACAGCATTTCAAGATG...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCCAGGAAGCCCACATGTaGTGTAGTGTGCAGAAATTC +
Preference number: 5 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAQEAHM*CSVQKF
Trigger: GAATTTCTGCACACTACACAACATGTGGGCTTCCTG...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp ATGGTTATGCAGTCGCTGTTAATTTTATCAACCATTAGTACCTGTTGCCTCTGGTGGAGCAGGTGTGAGTaGCCTTCCATTGATTGGTTA +
Preference number: 5 (lower is better)
Translates to: MVMQSLLILSTISTCCLWWSRCE*PSIDWL
Trigger: TAACCAATCAATGGAAGGCAACTCACACCTGCTCCA...CCAGAGGCAACAGGTACTAATGGTTGATAAAATTAACAGCGACTGCATAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAAACAGGCGTGAATGCATaGGTCCCACAGGTGAATAAC +
Preference number: 5 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLETGVNA*VPQVNN
Trigger: GTTATTCACCTGTGGGACCAATGCATTCACGCCTGT...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGCCAGCAAACAGCTGCTaGAGGTCTGATTCAGGGGTA +
Preference number: 5 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQPANSC*RSDSGV
Trigger: TACCCCTGAATCAGACCTCAAGCAGCTGTTTGCTGG...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAAGGCTCTCCTCCAGGCTaGTGCATTTCTTCATTACCA +
Preference number: 5 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLEGSPPG*CISSLP
Trigger: TGGTAATGAAGAAATGCACAAGCCTGGAGGAGAGCC...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAACTACGCTACTGGATCTaGCCACAGATACTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLELRYWI*PQILLG
Trigger: TCCCAGAAGTATCTGTGGCAAGATCCAGTAGCGTAG...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTATCATGTGGAACATGTaGAACTCTCCACACCTTTTC +
Preference number: 5 (lower is better)
Translates to: QDFITCSEASDELFQSCSIMWNM*NSPHLF
Trigger: GAAAAGGTGTGGAGAGTTCAACATGTTCCACATGAT...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATGGTTTTTGTTCCACTaGTACCAAGAAAATAGGAAG +
Preference number: 5 (lower is better)
Translates to: SERQHEVPTAKTLNVINPWFLFH*YQENRK
Trigger: CTTCCTATTTTCTTGGTACAAGTGGAACAAAAACCA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCCACAAGAAAACCCCATaGAAGTGTAAAGGATACCCG +
Preference number: 5 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAHKKTP*KCKGYP
Trigger: CGGGTATCCTTTACACTTCAATGGGGTTTTCTTGTG...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp CTACACAGTGATGGACAAACACAACTTATTCCACAGCTGGTAAAATACTTAGAAGATCTGAAAGTGCCCTaGACTAGTTCCTGCCATTGC +
Preference number: 5 (lower is better)
Translates to: LHSDGQTQLIPQLVKYLEDLKVP*TSSCHC
Trigger: GCAATGGCAGGAACTAGTCAAGGGCACTTTCAGATC...TTCTAAGTATTTTACCAGCTGTGGAATAAGTTGTGTTTGTCCATCACTGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp AGTGAGAGGCAACATGAAGTCCCCACTGCAAAGACCCTGAATGTCATTAATCCATTGAAGAATCCAACATaGGACCAAAAGTTTGTGCAT +
Preference number: 5 (lower is better)
Translates to: SERQHEVPTAKTLNVINPLKNPT*DQKFVH
Trigger: ATGCACAAACTTTTGGTCCAATGTTGGATTCTTCAA...TGGATTAATGACATTCAGGGTCTTTGCAGTGGGGACTTCATGTTGCCTCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGATGGTAAGAAGGGGGTaGGTAGGAAAGTGTGACTGC +
Preference number: 5 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMMVRRG*VGKCDC
Trigger: GCAGTCACACTTTCCTACCAACCCCCTTCTTACCAT...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGTTCCAAATGGCTTTCTaGAGAGGTGATTCACAAGTG +
Preference number: 5 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMFQMAF*RGDSQV
Trigger: CACTTGTGAATCACCTCTCAAGAAAGCCATTTGGAA...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652226.1
CDS-3UTR CAA 90 bp CCAAGTCATTGCAAAAGACTCATTAAAGACCAGCTTCGATGCCATTTAGAAACCACAAAGTTTGGCTCATaGAGCCATTTGGAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: PSHCKRLIKDQLRCHLETTKFGS*SHLELY
Trigger: GTACAACTCCAAATGGCTCAATGAGCCAAACTTTGT...GGTTTCTAAATGGCATCGAAGCTGGTCTTTAATGAGTCTTTTGCAATGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGGGGCAGGGCAAAATGTaGCATTCCTGGTATTCCAGA +
Preference number: 5 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQGQGKM*HSWYSR
Trigger: TCTGGAATACCAGGAATGCAACATTTTGCCCTGCCC...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCCCAGTGAGATGTGGGTaGAAGTATTTGTTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAPVRCG*KYLFLS
Trigger: GGAAAGAAACAAATACTTCAACCCACATCTCACTGG...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCCAGCTTTATCCAGATTaGGAAAGTTGGGCAATCCAT +
Preference number: 5 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAQLYPD*ESWAIH
Trigger: ATGGATTGCCCAACTTTCCAAATCTGGATAAAGCTG...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGTTGCTTGAGCAAGAATaGATATTGACTCCGATTGCA +
Preference number: 5 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMLLEQE*ILTPIA
Trigger: TGCAATCGGAGTCAATATCAATTCTTGCTCAAGCAA...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp GAAGGTTCATTTGTAAGAACACGTTTCCGTGTCTACCCAGGACTTTATCACATGTTTCTCTCTCTCTTTTaGGCCAGTCAGAAGAATGAT +
Preference number: 5 (lower is better)
Translates to: EGSFVRTRFRVYPGLYHMFLSLF*ASQKND
Trigger: ATCATTCTTCTGACTGGCCAAAAAGAGAGAGAGAAA...CATGTGATAAAGTCCTGGGTAGACACGGAAACGTGTTCTTACAAATGAACCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652226.1
CDS GCA 90 bp TGGCCAGTCAGAAGAATGATATCTCATTTGAATTATCCACCGCCATaGAGCAGAGAAGGAGAATCACATAATTTTAAAATTCAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: WPVRRMISHLNYPPP*SREGESHNFKIQAE
Trigger: CTCAGCCTGAATTTTAAAATTATGTGATTCTCCTTCTCTGCTGCATGGCGGTGGATAATTCAAATGAGATATCATTCTTCTGACTGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652226.1
CDS-3UTR CAA 90 bp CAGGACTTTATCACATGCTCAGAGGCATCAGATGAACTTTTTCAGTCGTGTTCTTCCTCTAGGATCAAGTaGTTTTTGTTAAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: QDFITCSEASDELFQSCSSSRIK*FLLNAL
Trigger: CAAGGCATTTAACAAAAACAACTTGATCCTAGAGGA...AGAACACGACTGAAAAAGTTCATCTGATGCCTCTGAGCATGTGATAAAGTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCGAGCAAGAATTGATATaGACTCCGATTGCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTEQELI*TPIAGS
Trigger: ACTCCCTGCAATCGGAGTCAATATCAATTCTTGCTC...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS TCA 90 bp GGCACAGGCCTTGAGGAACTGGGGATTTACAAGAAGCCAAAAACATaGAAGCTGTTAGTACTCATCATAATTATTGAGATCTGTAAAGTA +
Preference number: 5 (lower is better)
Translates to: GTGLEELGIYKKPKT*KLLVLIIIIEICKV
Trigger: TACTTTACAGATCTCAATAATTATGATGAGTACTAACAGCTTTCATGTTTTTGGCTTCTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCTCTGACATTCCTCCTTaGATTTGCCTTTGCTGTAAC +
Preference number: 5 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTSDIPP*ICLCCN
Trigger: GTTACAGCAAAGGCAAATCAAAGGAGGAATGTCAGA...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCTCCTCTAGGATCAAGTaGTTTTTGTTAAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLASSRIK*FLLNAL
Trigger: CAAGGCATTTAACAAAAACAACTTGATCCTAGAGGA...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS-3UTR CAA 90 bp AAATTTAAGATCAGTAACTGTCTGCAAGCTTACCAAGGGCTGAAATTGGCTTTGTGGCTTGAAATGCACTaGAAATGTATCCAAACTTCG +
Preference number: 5 (lower is better)
Translates to: KFKISNCLQAYQGLKLALWLEMH*KCIQTS
Trigger: CGAAGTTTGGATACATTTCAAGTGCATTTCAAGCCA...CAAAGCCAATTTCAGCCCTTGGTAAGCTTGCAGACAGTTACTGATCTTAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGCAGCTTTATCCAGATTaGGAAAGTTGGGCAATCCAT +
Preference number: 5 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMQLYPD*ESWAIH
Trigger: ATGGATTGCCCAACTTTCCAAATCTGGATAAAGCTG...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCCAAATATTGGTAACGTaGTGTCAACATGCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTQILVT*CQHASP
Trigger: TGGGGAAGCATGTTGACACAACGTTACCAATATTTG...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp AGCTTTATCCAGATTTGGAAAGTTGGGCAATCCATGGTGAATAATTGTTTGGCCTTCAGAGTCCAGATTTaGCTCTCAGCTTGTATTTAT +
Preference number: 5 (lower is better)
Translates to: SFIQIWKVGQSMVNNCLAFRVQI*LSACIY
Trigger: ATAAATACAAGCTGAGAGCAAAATCTGGACTCTGAA...GGCCAAACAATTATTCACCATGGATTGCCCAACTTTCCAAATCTGGATAAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS TCA 90 bp TCATATCAACATGCTTTATATAGTGTAGAGTCCTTCAAGACAGGGTaGTGGCTGCTCATAATTGCATTCTTCTTACCTTTGATTTGCCTT +
Preference number: 5 (lower is better)
Translates to: SYQHALYSVESFKTG*WLLIIAFFLPLICL
Trigger: AAGGCAAATCAAAGGTAAGAAGAATGCAATTATGAGCAGCCATCACCCTGTCTTGAAGGACTCTACACTATATAAAGCATGTTGATATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509486.2
CDS-3UTR CAA 90 bp TTTCTTCATTTTATGAAATATTATGGACCTATGCACTTCTTGTGGAAGGAGCAGCAAAAAGGCTGTGTTTaGAGACAGCTTTCACTAGGA +
Preference number: 5 (lower is better)
Translates to: FLHFMKYYGPMHFLWKEQQKGCV*RQLSLG
Trigger: TCCTAGTGAAAGCTGTCTCAAAACACAGCCTTTTTG...CTGCTCCTTCCACAAGAAGTGCATAGGTCCATAATATTTCATAAAATGAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp TCCCTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGTCTTCTGAGCATATGTaGTACCTATTCTGGTTCTAC +
Preference number: 5 (lower is better)
Translates to: SLPHASVTCIKFLIMQQMSSEHM*YLFWFY
Trigger: GTAGAACCAGAATAGGTACAACATATGCTCAGAAGA...CATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS-3UTR CAA 90 bp CTTCCTCATGCTTCTGTAACATGTATCAAATTTCTGATAATGCAACAGATGACCTCTGTAAACTCCAGTTaGTACCATATCATAAGTGGT +
Preference number: 5 (lower is better)
Translates to: LPHASVTCIKFLIMQQMTSVNSS*YHIISG
Trigger: ACCACTTATGATATGGTACAAACTGGAGTTTACAGA...GGTCATCTGTTGCATTATCAGAAATTTGATACATGTTACAGAAGCATGAGGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382496.10
CDS CCA 72 bp GGGTGGGAGAAGGGAGCGTCCCGGGATGAGCGACACTaGCCGGGCCGCCCCTGCACGGGGAAGGTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: GWEKGASRDERH*PGRPCTGKVEG
Trigger: GCCCTCCACCTTCCCCGTGCAGGGGCGGCCCGGCCAGTGTCGCTCATCCCGGGACGCTCCCTTCTCCCACCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 72 bp GGGCAGTCCTGGGTGGGAGAAGGGAGCGTCCCGGGATaGGCGACACTGGCCGGGCCGCCCCTGCACGGGGAA +
Preference number: 6 (lower is better)
Translates to: GQSWVGEGSVPG*ATLAGPPLHGE
Trigger: TTCCCCGTGCAGGGGCGGCCCGGCCAGTGTCGCTCATCCCGGGACGCTCCCTTCTCCCACCCAGGACTGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp TCCATGCCAGGGCCCTCGCACTGCCAGCCACCACACTaGGGGGCCGGGCTGTCGCAGGAGCGGGTTCGACAG +
Preference number: 6 (lower is better)
Translates to: SMPGPSHCQPPH*GAGLSQERVRQ
Trigger: CTGTCGAACCCGCTCCTGCGACAGCCCGGCCCCGCAGTGTGGTGGCTGGCAGTGCGAGGGCCCTGGCATGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp ACGGCCGGCTCTCCGTGGTGTTCCCGGAGCACTGGCTaGCCATGGGGAACAGGAGGATGCACTGGCGGGCGC +
Preference number: 6 (lower is better)
Translates to: TAGSPWCSRSTG*PWGTGGCTGGR
Trigger: GCGCCCGCCAGTGCATCCTCCTGTTCCCCATGGGCAGCCAGTGCTCCGGGAACACCACGGAGAGCCGGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp GAACAGTTGGCGATCTCCATGCCAGGGCCCTCGCACTaGCAGCCACCACACTGCGGGGCCGGGCTGTCGCAG +
Preference number: 6 (lower is better)
Translates to: EQLAISMPGPSH*QPPHCGAGLSQ
Trigger: CTGCGACAGCCCGGCCCCGCAGTGTGGTGGCTGGCAGTGCGAGGGCCCTGGCATGGAGATCGCCAACTGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp TGGGTGTCCAAGCCAGCTCCGCGGGGCAGTCCTGGGTaGGAGAAGGGAGCGTCCCGGGATGAGCGACACTGG +
Preference number: 6 (lower is better)
Translates to: WVSKPAPRGSPG*EKGASRDERHW
Trigger: CCAGTGTCGCTCATCCCGGGACGCTCCCTTCTCCCACCCAGGACTGCCCCGCGGAGCTGGCTTGGACACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp CGCGCCCAGCAGAGACGACCCTCGAGGTGGCAAAGTTaGGTGTCCAAGCCAGCTCCGCGGGGCAGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: RAQQRRPSRWQS*VSKPAPRGSPG
Trigger: CCCAGGACTGCCCCGCGGAGCTGGCTTGGACACCCAACTTTGCCACCTCGAGGGTCGTCTCTGCTGGGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp GGGCAGGTTCGCGCCCAGCAGAGACGACCCTCGAGGTaGCAAAGTTGGGTGTCCAAGCCAGCTCCGCGGGGC +
Preference number: 6 (lower is better)
Translates to: GQVRAQQRRPSR*QSWVSKPAPRG
Trigger: GCCCCGCGGAGCTGGCTTGGACACCCAACTTTGCCACCTCGAGGGTCGTCTCTGCTGGGCGCGAACCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp AGGTGCGAGGAGCGCTGGTGCCAGTCATCCAGCGCCTaGGGGCCAGAGCGGCTCCGAGGATCCTCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: RCEERWCQSSSA*GPERLRGSSSA
Trigger: TGCTGAAGAGGATCCTCGGAGCCGCTCTGGCCCCCAGGCGCTGGATGACTGGCACCAGCGCTCCTCGCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp ACACACGGCCGGCTCTCCGTGGTGTTCCCGGAGCACTaGCTGCCCATGGGGAACAGGAGGATGCACTGGCGG +
Preference number: 6 (lower is better)
Translates to: THGRLSVVFPEH*LPMGNRRMHWR
Trigger: CCGCCAGTGCATCCTCCTGTTCCCCATGGGCAGCCAGTGCTCCGGGAACACCACGGAGAGCCGGCCGTGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp TCGCGCCCAGCAGAGACGACCCTCGAGGTGGCAAAGTaGGGTGTCCAAGCCAGCTCCGCGGGGCAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SRPAETTLEVAK*GVQASSAGQSW
Trigger: CCAGGACTGCCCCGCGGAGCTGGCTTGGACACCCAACTTTGCCACCTCGAGGGTCGTCTCTGCTGGGCGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 90 bp TGGGCAGGTTCGCGCCCAGCAGAGACGACCCTCGAGGTGGCAAAGTaGGGTGTCCAAGCCAGCTCCGCGGGGCAGTCCTGGGTGGGAGAA +
Preference number: 6 (lower is better)
Translates to: WAGSRPAETTLEVAK*GVQASSAGQSWVGE
Trigger: TTCTCCCACCCAGGACTGCCCCGCGGAGCTGGCTTGGACACCCAACTTTGCCACCTCGAGGGTCGTCTCTGCTGGGCGCGAACCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp AGTCTCACACACCAACACAGGTGCGAGGAGCGCTGGTaGCAGTCATCCAGCGCCTGGGGGCCAGAGCGGCTC +
Preference number: 6 (lower is better)
Translates to: SLTHQHRCEERW*QSSSAWGPERL
Trigger: GAGCCGCTCTGGCCCCCAGGCGCTGGATGACTGGCACCAGCGCTCCTCGCACCTGTGTTGGTGTGTGAGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp TGCTCCCGCAGGCCCACGAACAGGACACTCTGGCTGTaGAGGATCTGCAGGCTCCTGATGGGCTCCCTCCGC +
Preference number: 6 (lower is better)
Translates to: CSRRPTNRTLWL*RICRLLMGSLR
Trigger: GCGGAGGGAGCCCATCAGGAGCCTGCAGATCCTGCACAGCCAGAGTGTCCTGTTCGTGGGCCTGCGGGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp AGGAGCGGGTTCGACAGAGGCAGGATCCCACGGCGCTaGCATCTGTGTGCGTGCAAGGCGTCCACGGAGACC +
Preference number: 6 (lower is better)
Translates to: RSGFDRGRIPRR*HLCACKASTET
Trigger: GGTCTCCGTGGACGCCTTGCACGCACACAGATGGCAGCGCCGTGGGATCCTGCCTCTGTCGAACCCGCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp CCAAGTCTCACACACCAACACAGGTGCGAGGAGCGCTaGTGCCAGTCATCCAGCGCCTGGGGGCCAGAGCGG +
Preference number: 6 (lower is better)
Translates to: PSLTHQHRCEER*CQSSSAWGPER
Trigger: CCGCTCTGGCCCCCAGGCGCTGGATGACTGGCACCAGCGCTCCTCGCACCTGTGTTGGTGTGTGAGACTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp GAGCACTGGCTGCCCATGGGGAACAGGAGGATGCACTaGCGGGCGCGGACTTGGACGCCAGAGGCTTCACAC +
Preference number: 6 (lower is better)
Translates to: EHWLPMGNRRMH*RARTWTPEASH
Trigger: GTGTGAAGCCTCTGGCGTCCAAGTCCGCGCCCGCCAGTGCATCCTCCTGTTCCCCATGGGCAGCCAGTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 90 bp CTGGCTGCCCATGGGGAACAGGAGGATGCACTGGCGGGCGCGGACTaGGACGCCAGAGGCTTCACACTCAGACCAGTCCGACCACTCCGA +
Preference number: 6 (lower is better)
Translates to: LAAHGEQEDALAGAD*DARGFTLRPVRPLR
Trigger: TCGGAGTGGTCGGACTGGTCTGAGTGTGAAGCCTCTGGCGTCCAAGTCCGCGCCCGCCAGTGCATCCTCCTGTTCCCCATGGGCAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp GCTTCCGGTTCCGAATGCCCCTGCTGCAGTCACGGCTaGACTGTGACCACGACGTCCAGGCTGACCAAGCCC +
Preference number: 6 (lower is better)
Translates to: ASGSECPCCSHG*TVTTTSRLTKP
Trigger: GGGCTTGGTCAGCCTGGACGTCGTGGTCACAGTGCAGCCGTGACTGCAGCAGGGGCATTCGGAACCGGAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp AGAGGCAGGATCCCACGGCGCTGCCATCTGTGTGCGTaGAAGGCGTCCACGGAGACCACACACCAAAGTGCC +
Preference number: 6 (lower is better)
Translates to: RGRIPRRCHLCA*KASTETTHQSA
Trigger: GGCACTTTGGTGTGTGGTCTCCGTGGACGCCTTGCACGCACACAGATGGCAGCGCCGTGGGATCCTGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp CGACAGAGGCAGGATCCCACGGCGCTGCCATCTGTGTaGGTGCAAGGCGTCCACGGAGACCACACACCAAAG +
Preference number: 6 (lower is better)
Translates to: RQRQDPTALPSV*VQGVHGDHTPK
Trigger: CTTTGGTGTGTGGTCTCCGTGGACGCCTTGCACGCACACAGATGGCAGCGCCGTGGGATCCTGCCTCTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp TGCGGCGAGCTTGAATGCCACCCCCGCATTGGGCTGTaGACCGTTCCCAAGGACCCCAGCCTGTCCAGAACA +
Preference number: 6 (lower is better)
Translates to: CGELECHPRIGL*TVPKDPSLSRT
Trigger: TGTTCTGGACAGGCTGGGGTCCTTGGGAACGGTGCACAGCCCAATGCGGGGGTGGCATTCAAGCTCGCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp ATGGGGAACAGGAGGATGCACTGGCGGGCGCGGACTTaGACGCCAGAGGCTTCACACTCAGACCAGTCCGAC +
Preference number: 6 (lower is better)
Translates to: MGNRRMHWRART*TPEASHSDQSD
Trigger: GTCGGACTGGTCTGAGTGTGAAGCCTCTGGCGTCCAAGTCCGCGCCCGCCAGTGCATCCTCCTGTTCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp ACAGATCCTGCGGCGAGCTTGAATGCCACCCCCGCATaGGGCTGTGCACCGTTCCCAAGGACCCCAGCCTGT +
Preference number: 6 (lower is better)
Translates to: TDPAASLNATPA*GCAPFPRTPAC
Trigger: ACAGGCTGGGGTCCTTGGGAACGGTGCACAGCCCAATGCGGGGGTGGCATTCAAGCTCGCCGCAGGATCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp CATGGGGAACAGGAGGATGCACTGGCGGGCGCGGACTaGGACGCCAGAGGCTTCACACTCAGACCAGTCCGA +
Preference number: 6 (lower is better)
Translates to: HGEQEDALAGAD*DARGFTLRPVR
Trigger: TCGGACTGGTCTGAGTGTGAAGCCTCTGGCGTCCAAGTCCGCGCCCGCCAGTGCATCCTCCTGTTCCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 90 bp GCAGCCTGCACAGTCAGGCCCATTCTCACAGATCCTGCGGCGAGCTaGAATGCCACCCCCGCATTGGGCTGTGCACCGTTCCCAAGGACC +
Preference number: 6 (lower is better)
Translates to: AACTVRPILTDPAAS*NATPALGCAPFPRT
Trigger: GGTCCTTGGGAACGGTGCACAGCCCAATGCGGGGGTGGCATTCAAGCTCGCCGCAGGATCTGTGAGAATGGGCCTGACTGTGCAGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 90 bp TCACGGCTGCACTGTGACCACGACGTCCAGGCTGACCAAGCCCCGTaGACCGTGTGGGCAGAGTATCTCCCAGCACGCAGGAAATCCCCA +
Preference number: 6 (lower is better)
Translates to: SRLHCDHDVQADQAP*TVWAEYLPARRKSP
Trigger: TGGGGATTTCCTGCGTGCTGGGAGATACTCTGCCCACACGGTCAACGGGGCTTGGTCAGCCTGGACGTCGTGGTCACAGTGCAGCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 72 bp AGGGCCCAGAGAAGGCCTGCGCGATGGCGCTCAGGTTaGAGACGCACACAGCTGAGGCCGCAATGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: RAQRRPARWRSG*RRTQLRPQCCS
Trigger: TGAACAGCATTGCGGCCTCAGCTGTGTGCGTCTTCAACCTGAGCGCCATCGCGCAGGCCTTCTCTGGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 72 bp ACGGTAGCCAGGCCGAGCGCGAGTTTTCTTGGTACTTaGAGGGCCCAGAGAAGGCCTGCGCGATGGCGCTCA +
Preference number: 6 (lower is better)
Translates to: TVARPSASFLGT*RAQRRPARWRS
Trigger: TGAGCGCCATCGCGCAGGCCTTCTCTGGGCCCTTCAAGTACCAAGAAAACTCGCGCTCGGCCTGGCTACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 72 bp GTGTGCGGTAGAACTGGCACCTCTTCAGGGGGATCTTaGCCACGTGCTCCCGCAGGCCCACGAACAGGACAC +
Preference number: 6 (lower is better)
Translates to: VCGRTGTSSGGS*PRAPAGPRTGH
Trigger: GTGTCCTGTTCGTGGGCCTGCGGGAGCACGTGGTCAAGATCCCCCTGAAGAGGTGCCAGTTCTACCGCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 72 bp CAGTCAGGCCCATTCTCACAGATCCTGCGGCGAGCTTaGATGCCACCCCCGCATTGGGCTGTGCACCGTTCC +
Preference number: 6 (lower is better)
Translates to: QSGPFSQILRRA*MPPPHWAVHRS
Trigger: GGAACGGTGCACAGCCCAATGCGGGGGTGGCATTCAAGCTCGCCGCAGGATCTGTGAGAATGGGCCTGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 72 bp ACTGTGACCACGACGTCCAGGCTGACCAAGCCCCGTTaGCCGTGTGGGCAGAGTATCTCCCAGCACGCAGGA +
Preference number: 6 (lower is better)
Translates to: TVTTTSRLTKPR*PCGQSISQHAG
Trigger: TCCTGCGTGCTGGGAGATACTCTGCCCACACGGTCAACGGGGCTTGGTCAGCCTGGACGTCGTGGTCACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp CAGGCCCATTCTCACAGATCCTGCGGCGAGCTTGAATaGCACCCCCGCATTGGGCTGTGCACCGTTCCCAAG +
Preference number: 6 (lower is better)
Translates to: QAHSHRSCGELE*HPRIGLCTVPK
Trigger: CTTGGGAACGGTGCACAGCCCAATGCGGGGGTGGCATTCAAGCTCGCCGCAGGATCTGTGAGAATGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp CCAGGCAGATGTCCCCTCCATAGGCCGGGGCTGGATTaGAGCAAGAGCGGGTCCTCATATAGTGTCCACCGC +
Preference number: 6 (lower is better)
Translates to: PGRCPLHRPGLD*SKSGSSYSVHR
Trigger: GCGGTGGACACTATATGAGGACCCGCTCTTGCTCCAATCCAGCCCCGGCCTATGGAGGGGACATCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp AAGGGCCCAGAGAAGGCCTGCGCGATGGCGCTCAGGTaGAAGACGCACACAGCTGAGGCCGCAATGCTGTTC +
Preference number: 6 (lower is better)
Translates to: KGPEKACAMALR*KTHTAEAAMLF
Trigger: GAACAGCATTGCGGCCTCAGCTGTGTGCGTCTTCAACCTGAGCGCCATCGCGCAGGCCTTCTCTGGGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp TACGGTAGCCAGGCCGAGCGCGAGTTTTCTTGGTACTaGAAGGGCCCAGAGAAGGCCTGCGCGATGGCGCTC +
Preference number: 6 (lower is better)
Translates to: YGSQAEREFSWY*KGPEKACAMAL
Trigger: GAGCGCCATCGCGCAGGCCTTCTCTGGGCCCTTCAAGTACCAAGAAAACTCGCGCTCGGCCTGGCTACCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 90 bp GGGTTGGGATACGGTAGCCAGGCCGAGCGCGAGTTTTCTTGGTACTaGAAGGGCCCAGAGAAGGCCTGCGCGATGGCGCTCAGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: GLGYGSQAEREFSWY*KGPEKACAMALRLK
Trigger: CTTCAACCTGAGCGCCATCGCGCAGGCCTTCTCTGGGCCCTTCAAGTACCAAGAAAACTCGCGCTCGGCCTGGCTACCGTATCCCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 90 bp CCCATTCTCACAGATCCTGCGGCGAGCTTGAATGCCACCCCCGCATaGGGCTGTGCACCGTTCCCAAGGACCCCAGCCTGTCCAGAACAT +
Preference number: 6 (lower is better)
Translates to: PILTDPAASLNATPA*GCAPFPRTPACPEH
Trigger: ATGTTCTGGACAGGCTGGGGTCCTTGGGAACGGTGCACAGCCCAATGCGGGGGTGGCATTCAAGCTCGCCGCAGGATCTGTGAGAATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp TGCGTGCAAGGCGTCCACGGAGACCACACACCAAAGTaGCCATCCACGGTGAGATTCCTGGTCGGACACGCA +
Preference number: 6 (lower is better)
Translates to: CVQGVHGDHTPK*PSTVRFLVGHA
Trigger: TGCGTGTCCGACCAGGAATCTCACCGTGGATGGGCACTTTGGTGTGTGGTCTCCGTGGACGCCTTGCACGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp TGTTGCAAACACGCTTCCGGTTCCGAATGCCCCTGCTaGAGTCACGGCTGCACTGTGACCACGACGTCCAGG +
Preference number: 6 (lower is better)
Translates to: CCKHASGSECPC*SHGCTVTTTSR
Trigger: CCTGGACGTCGTGGTCACAGTGCAGCCGTGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp GGTTGTTGCAAACACGCTTCCGGTTCCGAATGCCCCTaGTGCAGTCACGGCTGCACTGTGACCACGACGTCC +
Preference number: 6 (lower is better)
Translates to: GCCKHASGSECP*CSHGCTVTTTS
Trigger: GGACGTCGTGGTCACAGTGCAGCCGTGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp GTTCGGGGTTGTTGCAAACACGCTTCCGGTTCCGAATaGCCCTGCTGCAGTCACGGCTGCACTGTGACCACG +
Preference number: 6 (lower is better)
Translates to: VRGCCKHASGSE*PCCSHGCTVTT
Trigger: CGTGGTCACAGTGCAGCCGTGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCCGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp TGGTCCACGGTGCCACACTGGAAGTGGGGGTTTGGGTaGGGATACGGTAGCCAGGCCGAGCGCGAGTTTTCT +
Preference number: 6 (lower is better)
Translates to: WSTVPHWKWGFG*GYGSQAEREFS
Trigger: AGAAAACTCGCGCTCGGCCTGGCTACCGTATCCCAACCCAAACCCCCACTTCCAGTGTGGCACCGTGGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp ACAGTCAGGCCCATTCTCACAGATCCTGCGGCGAGCTaGAATGCCACCCCCGCATTGGGCTGTGCACCGTTC +
Preference number: 6 (lower is better)
Translates to: TVRPILTDPAAS*NATPALGCAPF
Trigger: GAACGGTGCACAGCCCAATGCGGGGGTGGCATTCAAGCTCGCCGCAGGATCTGTGAGAATGGGCCTGACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp GTGGACGAGCGCTTCTCTGCCCTGCACCACGTCGACTaGCACGTGGGAAAAGCGGCTATTGTCCTCCATGAA +
Preference number: 6 (lower is better)
Translates to: VDERFSALHHVD*HVGKAAIVLHE
Trigger: TTCATGGAGGACAATAGCCGCTTTTCCCACGTGGCAGTCGACGTGGTGCAGGGCAGAGAAGCGCTCGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp GCCTGCCTCCCACAGCCCTGTGATGTTCAACTCTTCTaGCGCGGGACTCCCATGTGGCTTTGTGTGGTGTGT +
Preference number: 6 (lower is better)
Translates to: ACLPQPCDVQLF*RGTPMWLCVVC
Trigger: ACACACCACACAAAGCCACATGGGAGTCCCGCGGCAGAAGAGTTGAACATCACAGGGCTGTGGGAGGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514923.4
CDS CCA 72 bp TTGGGATACGGTAGCCAGGCCGAGCGCGAGTTTTCTTaGTACTTGAAGGGCCCAGAGAAGGCCTGCGCGATG +
Preference number: 6 (lower is better)
Translates to: LGYGSQAEREFS*YLKGPEKACAM
Trigger: CATCGCGCAGGCCTTCTCTGGGCCCTTCAAGTACCAAGAAAACTCGCGCTCGGCCTGGCTACCGTATCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp TGCAGATTTCTCTCGGTCAGGTTCACGTACAGGCCCTaGTCCACGGTGCCACACTGGAAGTGGGGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: CRFLSVRFTYRP*STVPHWKWGFG
Trigger: CCCAAACCCCCACTTCCAGTGTGGCACCGTGGACCAGGGCCTGTACGTGAACCTGACCGAGAGAAATCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp CTCAACGAGCGGTTGGTGCAGACAGGCGTGAATGCATaGGTCCCACAGGTGAATAACCGGTCGCCACCCACC +
Preference number: 6 (lower is better)
Translates to: LNERLVQTGVNA*VPQVNNRSPPT
Trigger: GGTGGGTGGCGACCGGTTATTCACCTGTGGGACCAATGCATTCACGCCTGTCTGCACCAACCGCTCGTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382496.10
ENST00000513968.4
ENST00000514923.4
ENST00000652226.1
CDS CAA 72 bp TGTTCAACTCTTCTGCCGCGGGACTCCCATGTGGCTTaGTGTGGTGTGTGCGGTCCTCCTGCTCCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: CSTLLPRDSHVA*CGVCGPPAPGC
Trigger: ACAGCCTGGAGCAGGAGGACCGCACACACCACACAAAGCCACATGGGAGTCCCGCGGCAGAAGAGTTGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514923.4
CDS CAA 90 bp GTCAGGTTGCTCAACGAGCGGTTGGTGCAGACAGGCGTGAATGCATaGGTCCCACAGGTGAATAACCGGTCGCCACCCACCAGAAGCACC +
Preference number: 6 (lower is better)
Translates to: VRLLNERLVQTGVNA*VPQVNNRSPPTRST
Trigger: GGTGCTTCTGGTGGGTGGCGACCGGTTATTCACCTGTGGGACCAATGCATTCACGCCTGTCTGCACCAACCGCTCGTTGAGCAACCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382496.10
ENST00000513968.4
ENST00000514923.4
ENST00000652226.1
CDS CAA 90 bp TGGTACTTGAAGGGCCCAGAGAAGGCCTGCGCGATGGCGCTCAGGTaGAAGACGCACACAGCTGAGGCCGCAATGCTGTTCACATTGGTG +
Preference number: 6 (lower is better)
Translates to: WYLKGPEKACAMALR*KTHTAEAAMLFTLV
Trigger: CACCAATGTGAACAGCATTGCGGCCTCAGCTGTGTGCGTCTTCAACCTGAGCGCCATCGCGCAGGCCTTCTCTGGGCCCTTCAAGTACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 90 bp AGCGGGTCCTCATATAGTGTCCACCGCCGCATGTTGCTGAACATTTaGTCCAGGGGGACCAGCAAGACCACACGCCATCCACTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: SGSSYSVHRRMLLNI*SRGTSKTTRHPLGR
Trigger: CCTGCCCAGTGGATGGCGTGTGGTCTTGCTGGTCCCCCTGGACAAAATGTTCAGCAACATGCGGCGGTGGACACTATATGAGGACCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp CCAGAGATGGGCCAAGGCAAGGCATTCCCCCATACTTaGGTTCGGGGTTGTTGCAAACACGCTTCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: PEMGQGKAFPHT*VRGCCKHASGS
Trigger: GGAACCGGAAGCGTGTTTGCAACAACCCCGAACCCAAGTATGGGGGAATGCCTTGCCTTGGCCCATCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp TGTGATGTTCAACTCTTCTGCCGCGGGACTCCCATGTaGCTTTGTGTGGTGTGTGCGGTCCTCCTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: CDVQLFCRGTPM*LCVVCAVLLLQ
Trigger: CTGGAGCAGGAGGACCGCACACACCACACAAAGCCACATGGGAGTCCCGCGGCAGAAGAGTTGAACATCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514923.4
CDS CAA 90 bp TCCTGGTATTCCAGAGATGGGCCAAGGCAAGGCATTCCCCCATACTaGGGTTCGGGGTTGTTGCAAACACGCTTCCGGTTCCGAATGCCC +
Preference number: 6 (lower is better)
Translates to: SWYSRDGPRQGIPPY*GSGLLQTRFRFRMP
Trigger: GGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCCGAACCCAAGTATGGGGGAATGCCTTGCCTTGGCCCATCTCTGGAATACCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 72 bp TCCACGGAGACCACACACCAAAGTGCCCATCCACGGTaGGATTCCTGGTCGGACACGCAGAGATGCTCTGTT +
Preference number: 6 (lower is better)
Translates to: STETTHQSAHPR*DSWSDTQRCSV
Trigger: AACAGAGCATCTCTGCGTGTCCGACCAGGAATCTCACCGTGGATGGGCACTTTGGTGTGTGGTCTCCGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 72 bp GCGGGTCCTCATATAGTGTCCACCGCCGCATGTTGCTaGACATTTTGTCCAGGGGGACCAGCAAGACCACAC +
Preference number: 6 (lower is better)
Translates to: AGPHIVSTAACC*TFCPGGPARPH
Trigger: GTGTGGTCTTGCTGGTCCCCCTGGACAAAATGTTCAGCAACATGCGGCGGTGGACACTATATGAGGACCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp GAGTTTTCTTGGTACTTGAAGGGCCCAGAGAAGGCCTaGGCGATGGCGCTCAGGTTGAAGACGCACACAGCT +
Preference number: 6 (lower is better)
Translates to: EFSWYLKGPEKA*AMALRLKTHTA
Trigger: AGCTGTGTGCGTCTTCAACCTGAGCGCCATCGCGCAGGCCTTCTCTGGGCCCTTCAAGTACCAAGAAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp GTCCAGGGCGTGGTCTTCTTCAGCTCAGGACACGGGTaGGTGTTGCAAGACTGGTACTCCACATTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: VQGVVFFSSGHG*VLQDWYSTLQP
Trigger: AGGCTGCAATGTGGAGTACCAGTCTTGCAACACCAACCCGTGTCCTGAGCTGAAGAAGACCACGCCCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp TCCAGAGATGGGCCAAGGCAAGGCATTCCCCCATACTaGGGTTCGGGGTTGTTGCAAACACGCTTCCGGTTC +
Preference number: 6 (lower is better)
Translates to: SRDGPRQGIPPY*GSGLLQTRFRF
Trigger: GAACCGGAAGCGTGTTTGCAACAACCCCGAACCCAAGTATGGGGGAATGCCTTGCCTTGGCCCATCTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 90 bp GATTGGAGCAAGAGCGGGTCCTCATATAGTGTCCACCGCCGCATGTaGCTGAACATTTTGTCCAGGGGGACCAGCAAGACCACACGCCAT +
Preference number: 6 (lower is better)
Translates to: DWSKSGSSYSVHRRM*LNILSRGTSKTTRH
Trigger: ATGGCGTGTGGTCTTGCTGGTCCCCCTGGACAAAATGTTCAGCAACATGCGGCGGTGGACACTATATGAGGACCCGCTCTTGCTCCAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS TCA 72 bp CTGCGCGATGGCGCTCAGGTTGAAGACGCACACAGCTaGGGCCGCAATGCTGTTCACATTGGTGGTAAAGAT +
Preference number: 6 (lower is better)
Translates to: LRDGAQVEDAHS*GRNAVHIGGKD
Trigger: ATCTTTACCACCAATGTGAACAGCATTGCGGCCTCAGCTGTGTGCGTCTTCAACCTGAGCGCCATCGCGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp TGGAGTTGTACTGCGCCGTGCGGAGAGGAGGTAAAATaGCTAGGCTTCGGTAAATGGCAGGATCACGTCCTG +
Preference number: 6 (lower is better)
Translates to: WSCTAPCGEEVK*LGFGKWQDHVL
Trigger: CAGGACGTGATCCTGCCATTTACCGAAGCCTAGGCATTTTACCTCCTCTCCGCACGGCGCAGTACAACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382496.10
ENST00000513968.4
ENST00000514923.4
ENST00000652226.1
CDS GCA 72 bp CCACTTCCAGCAAATTCGGATCAGCCAGGCGGGCTTTaGATGTGTATCGGAATCGTTGCTCATAGTGGCCGC +
Preference number: 6 (lower is better)
Translates to: PLPANSDQPGGL*MCIGIVAHSGR
Trigger: GCGGCCACTATGAGCAACGATTCCGATACACATGCAAAGCCCGCCTGGCTGATCCGAATTTGCTGGAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp AAGAGCGGGTCCTCATATAGTGTCCACCGCCGCATGTaGCTGAACATTTTGTCCAGGGGGACCAGCAAGACC +
Preference number: 6 (lower is better)
Translates to: KSGSSYSVHRRM*LNILSRGTSKT
Trigger: GGTCTTGCTGGTCCCCCTGGACAAAATGTTCAGCAACATGCGGCGGTGGACACTATATGAGGACCCGCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp CCCACTGCGTCATGCTCAGGCTCTCCTCCAGGCTTGTaGATTTCTTCATTACCACATCCCAGCCACAGTAAG +
Preference number: 6 (lower is better)
Translates to: PTASCSGSPPGL*ISSLPHPSHSK
Trigger: CTTACTGTGGCTGGGATGTGGTAATGAAGAAATGCACAAGCCTGGAGGAGAGCCTGAGCATGACGCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS GCA 72 bp AAGACCACACGCCATCCACTGGGCAGGGCAAAATGTTaGATTCCTGGTATTCCAGAGATGGGCCAAGGCAAG +
Preference number: 6 (lower is better)
Translates to: KTTRHPLGRAKC*IPGIPEMGQGK
Trigger: CTTGCCTTGGCCCATCTCTGGAATACCAGGAATGCAACATTTTGCCCTGCCCAGTGGATGGCGTGTGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp GTTCCCACTGCGTCATGCTCAGGCTCTCCTCCAGGCTaGTGCATTTCTTCATTACCACATCCCAGCCACAGT +
Preference number: 6 (lower is better)
Translates to: VPTASCSGSPPG*CISSLPHPSHS
Trigger: ACTGTGGCTGGGATGTGGTAATGAAGAAATGCACAAGCCTGGAGGAGAGCCTGAGCATGACGCAGTGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp ATCAGCCAGGCGGGCTTTGCATGTGTATCGGAATCGTaGCTCATAGTGGCCGCCGTTGTCAGAGATGTTGAC +
Preference number: 6 (lower is better)
Translates to: ISQAGFACVSES*LIVAAVVRDVD
Trigger: GTCAACATCTCTGACAACGGCGGCCACTATGAGCAACGATTCCGATACACATGCAAAGCCCGCCTGGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp CAAGACCACACGCCATCCACTGGGCAGGGCAAAATGTaGCATTCCTGGTATTCCAGAGATGGGCCAAGGCAA +
Preference number: 6 (lower is better)
Translates to: QDHTPSTGQGKM*HSWYSRDGPRQ
Trigger: TTGCCTTGGCCCATCTCTGGAATACCAGGAATGCAACATTTTGCCCTGCCCAGTGGATGGCGTGTGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 72 bp TCATATAGTGTCCACCGCCGCATGTTGCTGAACATTTaGTCCAGGGGGACCAGCAAGACCACACGCCATCCA +
Preference number: 6 (lower is better)
Translates to: SYSVHRRMLLNI*SRGTSKTTRHP
Trigger: TGGATGGCGTGTGGTCTTGCTGGTCCCCCTGGACAAAATGTTCAGCAACATGCGGCGGTGGACACTATATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 90 bp AGATGCTCTGTTCCCACTGCGTCATGCTCAGGCTCTCCTCCAGGCTaGTGCATTTCTTCATTACCACATCCCAGCCACAGTAAGGGTCCT +
Preference number: 6 (lower is better)
Translates to: RCSVPTASCSGSPPG*CISSLPHPSHSKGP
Trigger: AGGACCCTTACTGTGGCTGGGATGTGGTAATGAAGAAATGCACAAGCCTGGAGGAGAGCCTGAGCATGACGCAGTGGGAACAGAGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 90 bp CAAATTCGGATCAGCCAGGCGGGCTTTGCATGTGTATCGGAATCGTaGCTCATAGTGGCCGCCGTTGTCAGAGATGTTGACAGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: QIRISQAGFACVSES*LIVAAVVRDVDRCP
Trigger: TGGACACCTGTCAACATCTCTGACAACGGCGGCCACTATGAGCAACGATTCCGATACACATGCAAAGCCCGCCTGGCTGATCCGAATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp GCAGGGCAAAATGTTGCATTCCTGGTATTCCAGAGATaGGCCAAGGCAAGGCATTCCCCCATACTTGGGTTC +
Preference number: 6 (lower is better)
Translates to: AGQNVAFLVFQR*AKARHSPILGF
Trigger: GAACCCAAGTATGGGGGAATGCCTTGCCTTGGCCCATCTCTGGAATACCAGGAATGCAACATTTTGCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CAA 90 bp TTCCGACCACCTGCTTCCCCACTAGACTTGTTCCAAATGGCTTTCTaGAGAGGTGATTCACAAGTGCAAGGAGAGAGAGGATGGAGGACG +
Preference number: 6 (lower is better)
Translates to: FRPPASPLDLFQMAF*RGDSQVQGERGWRT
Trigger: CGTCCTCCATCCTCTCTCTCCTTGCACTTGTGAATCACCTCTCAAGAAAGCCATTTGGAACAAGTCTAGTGGGGAAGCAGGTGGTCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652226.1
CDS CAA 90 bp TGGACGCAGAAGGCTGACTTCCGACCACCTGCTTCCCCACTAGACTaGTTCCAAATGGCTTTCTTGAGAGGTGATTCACAAGTGCAAGGA +
Preference number: 6 (lower is better)
Translates to: WTQKADFRPPASPLD*FQMAFLRGDSQVQG
Trigger: TCCTTGCACTTGTGAATCACCTCTCAAGAAAGCCATTTGGAACAAGTCTAGTGGGGAAGCAGGTGGTCGGAAGTCAGCCTTCTGCGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652226.1
CDS GCA 72 bp ACAAAGTTTGGCTCATTGAGCCATTTGGAGTTGTACTaGGCCGTGCGGAGAGGAGGTAAAATGCCTAGGCTT +
Preference number: 6 (lower is better)
Translates to: TKFGSLSHLELY*AVRRGGKMPRL
Trigger: AAGCCTAGGCATTTTACCTCCTCTCCGCACGGCGCAGTACAACTCCAAATGGCTCAATGAGCCAAACTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382496.10
ENST00000513968.4
ENST00000514923.4
ENST00000652226.1
CDS CAA 72 bp GATGACACAAAGTTTGGCTCATTGAGCCATTTGGAGTaGTACTGCGCCGTGCGGAGAGGAGGTAAAATGCCT +
Preference number: 6 (lower is better)
Translates to: DDTKFGSLSHLE*YCAVRRGGKMP
Trigger: AGGCATTTTACCTCCTCTCCGCACGGCGCAGTACAACTCCAAATGGCTCAATGAGCCAAACTTTGTGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382496.10
ENST00000513968.4
ENST00000514923.4
ENST00000652226.1
CDS CCA 72 bp AACATGGGCAGTCATGGGGCACAGGCCTTGAGGAACTaGGGATTTACAAGAAGCCAAAAACATGAAAGCTGT +
Preference number: 6 (lower is better)
Translates to: NMGSHGAQALRN*GFTRSQKHESC
Trigger: ACAGCTTTCATGTTTTTGGCTTCTTGTAAATCCCCAGTTCCTCAAGGCCTGTGCCCCATGACTGCCCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1
CDS CCA 72 bp ACTCCCATTCCACAGCCCAATTGTCTTCCTCAGACCTaGATAAGAGACAGATCCTCAAGCTGTAACCTGAAG +
Preference number: 6 (lower is better)
Translates to: TPIPQPNCLPQT*IRDRSSSCNLK
Trigger: CTTCAGGTTACAGCTTGAGGATCTGTCTCTTATCCAGGTCTGAGGAAGACAATTGGGCTGTGGAATGGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509486.2
CDS TCA 72 bp ATGTTAACTGCGAGAAATCCACAGCATTCTTCGCTCTaGACTCCCGTAACCAGGGGCCAATTTCTTTATAGG +
Preference number: 6 (lower is better)
Translates to: MLTARNPQHSSL*TPVTRGQFLYR
Trigger: CCTATAAAGAAATTGGCCCCTGGTTACGGGAGTTCAGAGCGAAGAATGCTGTGGATTTCTCGCAGTTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382496.10
ENST00000509486.2
ENST00000513968.4
ENST00000652226.1
CDS CAA 90 bp GTGGAAAGTGCTTTAAGGTTACACTTTGTGGAGATAGAGGAGAGCTaGGAGGGCTTAGAGCAGCATATTTTTCTAGTCATATCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: VESALRLHFVEIEES*EGLEQHIFLVISQV
Trigger: GACCTGGGATATGACTAGAAAAATATGCTGCTCTAAGCCCTCCAAGCTCTCCTCTATCTCCACAAAGTGTAACCTTAAAGCACTTTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513968.4
CDS CAA 72 bp GCTTTAAGGTTACACTTTGTGGAGATAGAGGAGAGCTaGGAGGGCTTAGAGCAGCATATTTTTCTAGTCATA +
Preference number: 6 (lower is better)
Translates to: ALRLHFVEIEES*EGLEQHIFLVI
Trigger: TATGACTAGAAAAATATGCTGCTCTAAGCCCTCCAAGCTCTCCTCTATCTCCACAAAGTGTAACCTTAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513968.4
CDS TCA 72 bp CATGCTTTATATAGTGTAGAGTCCTTCAAGACAGGGTaGTGGCTGCTCATAATTGCATTCTTCTTACCTTTG +
Preference number: 6 (lower is better)
Translates to: HALYSVESFKTG*WLLIIAFFLPL
Trigger: CAAAGGTAAGAAGAATGCAATTATGAGCAGCCATCACCCTGTCTTGAAGGACTCTACACTATATAAAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509486.2
CDS TCA 72 bp GAAAAAGAAGTAGGTAAAATTTCCGATGTCATAAGATaGCACAAAGTTTGGCTCATTGAGCCATTTGGAGTT +
Preference number: 6 (lower is better)
Translates to: EKEVGKISDVIR*HKVWLIEPFGV
Trigger: AACTCCAAATGGCTCAATGAGCCAAACTTTGTGTCATCTTATGACATCGGAAATTTTACCTACTTCTTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382496.10
ENST00000513968.4
ENST00000514923.4
ENST00000652226.1
CDS TCA 72 bp CTTGAGGAACTGGGGATTTACAAGAAGCCAAAAACATaGAAGCTGTTAGTACTCATCATAATTATTGAGATC +
Preference number: 6 (lower is better)
Translates to: LEELGIYKKPKT*KLLVLIIIIEI
Trigger: GATCTCAATAATTATGATGAGTACTAACAGCTTTCATGTTTTTGGCTTCTTGTAAATCCCCAGTTCCTCAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382496.10
ENST00000652226.1