RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEMA4F (Homo sapiens)

Ensembl gene IDs: ENSG00000135622

Ensembl transcript IDs: ENST00000339773.9, ENST00000357877.7, ENST00000416236.5, ENST00000420077.5, ENST00000434486.5, ENST00000446927.5, ENST00000453930.5, ENST00000458114.5, ENST00000473350.1, ENST00000611975.4

Found 894 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCCCGCCCCCACTGTGTGGGCCCGGCTCGGAGCATCTCGCTGGCTaGCCCATACCAAGCTGTAAGCTGCTACCACATGGGCTGCCCCAC +
Preference number: 1 (lower is better)
Translates to: VPPPLCGPGSEHLAG*PIPSCKLLPHGLPH
Trigger: GTGGGGCAGCCCATGTGGTAGCAGCTTACAGCTTGGTATGGGGCAGCCAGCGAGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR GCA 90 bp ATGGGAGTCCCTGCCCCAAGCTCAGGTCGAAGCACAGCAACATCCTaGAGGACACTGGAGGCCCGGCCATGCTCAGGCCCTGGACAGAGC +
Preference number: 1 (lower is better)
Translates to: MGVPAPSSGRSTATS*RTLEARPCSGPGQS
Trigger: GCTCTGTCCAGGGCCTGAGCATGGCCGGGCCTCCAGTGTCCTGCAGGATGTTGCTGTGCTTCGACCTGAGCTTGGGGCAGGGACTCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 90 bp CCGAATGTGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTaGGAATCCACCAAAGCCACTGCCCCTCTTGGCCAGGGCCAGCGG +
Preference number: 1 (lower is better)
Translates to: PNVGWAWARIKQEGW*ESTKATAPLGQGQR
Trigger: CCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 90 bp CAGCAGGGGGTGGCCATCAGCTGGAAACACTGGCCTGTCCATGAGTaGGTGGTCCCGGATGAAGGTGAGTACGCGGTCAGGCAGGGAGAG +
Preference number: 1 (lower is better)
Translates to: QQGVAISWKHWPVHE*VVPDEGEYAVRQGE
Trigger: CTCTCCCTGCCTGACCGCGTACTCACCTTCATCCGGGACCACCCACTCATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCCCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR GCA 90 bp TCGCTGGCTGCCCCATACCAAGCTGTAAGCTGCTACCACATGGGCTaGCCCACCCTCCTGACATTCACAGGCATAAGCGCCCATGGCCCC +
Preference number: 1 (lower is better)
Translates to: SLAAPYQAVSCYHMG*PTLLTFTGISAHGP
Trigger: GGGGCCATGGGCGCTTATGCCTGTGAATGTCAGGAGGGTGGGGCAGCCCATGTGGTAGCAGCTTACAGCTTGGTATGGGGCAGCCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR GCA 90 bp TCGCCGTCGCTGCTGACGCCGACCAATCAGAATGAGAGTCAGGGATaGTGCGAGAATCCCCAAGAAGAAGCCAGCCAGTCCCGCCCCCAC +
Preference number: 1 (lower is better)
Translates to: SPSLLTPTNQNESQG*CENPQEEASQSRPH
Trigger: GTGGGGGCGGGACTGGCTGGCTTCTTCTTGGGGATTCTCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGCGTCAGCAGCGACGGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR GCA 90 bp CCGTCGCTGCTGACGCCGACCAATCAGAATGAGAGTCAGGGATGCTaGGAGAATCCCCAAGAAGAAGCCAGCCAGTCCCGCCCCCACTGT +
Preference number: 1 (lower is better)
Translates to: PSLLTPTNQNESQGC*ENPQEEASQSRPHC
Trigger: ACAGTGGGGGCGGGACTGGCTGGCTTCTTCTTGGGGATTCTCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGCGTCAGCAGCGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 90 bp AGGGGGTGGCCATCAGCTGGAAACACTGGCCTGTCCATGAGTGGGTaGTCCCGGATGAAGGTGAGTACGCGGTCAGGCAGGGAGAGAGAT +
Preference number: 1 (lower is better)
Translates to: RGWPSAGNTGLSMSG*SRMKVSTRSGRERD
Trigger: ATCTCTCTCCCTGCCTGACCGCGTACTCACCTTCATCCGGGACCACCCACTCATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 90 bp GGCTGTGGCTCTGGGAATAAGGCCAGATCTTCAAGAACGCTGAGCTaGGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCATCCTCTGTC +
Preference number: 1 (lower is better)
Translates to: GCGSGNKARSSRTLS*APIRTARWRCPSSV
Trigger: GACAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTTCTTGAAGATCTGGCCTTATTCCCAGAGCCACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 90 bp TGTATCTGTAGTGACCAGCAGGGGGTGGCCATCAGCTGGAAACACTaGCCTGTCCATGAGTGGGTGGTCCCGGATGAAGGTGAGTACGCG +
Preference number: 1 (lower is better)
Translates to: CICSDQQGVAISWKH*PVHEWVVPDEGEYA
Trigger: CGCGTACTCACCTTCATCCGGGACCACCCACTCATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCCCTGCTGGTCACTACAGATACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 90 bp CAACTGGCTGTGGCTCTGGGAATAAGGCCAGATCTTCAAGAACGCTaGGCTGAGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCATCCT +
Preference number: 1 (lower is better)
Translates to: QLAVALGIRPDLQER*AELRSALLGGGVHP
Trigger: AGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTTCTTGAAGATCTGGCCTTATTCCCAGAGCCACAGCCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 90 bp GAAGTTCCCTCTGTCGCCGTCGCTGCTGACGCCGACCAATCAGAATaGGAGTCAGGGATGCTGCGAGAATCCCCAAGAAGAAGCCAGCCA +
Preference number: 1 (lower is better)
Translates to: EVPSVAVAADADQSE*ESGMLRESPRRSQP
Trigger: TGGCTGGCTTCTTCTTGGGGATTCTCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGCGTCAGCAGCGACGGCGACAGAGGGAACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 90 bp CCCACCTTGTCTCTAGCCAGAAGTTCCCTCTGTCGCCGTCGCTGCTaGCGCCGACCAATCAGAATGAGAGTCAGGGATGCTGCGAGAATC +
Preference number: 1 (lower is better)
Translates to: PTLSLARSSLCRRRC*RRPIRMRVRDAARI
Trigger: GATTCTCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGCGTCAGCAGCGACGGCGACAGAGGGAACTTCTGGCTAGAGACAAGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 90 bp GAGATAGGCTGTATCTGTAGTGACCAGCAGGGGGTGGCCATCAGCTaGAAACACTGGCCTGTCCATGAGTGGGTGGTCCCGGATGAAGGT +
Preference number: 1 (lower is better)
Translates to: EIGCICSDQQGVAIS*KHWPVHEWVVPDEG
Trigger: ACCTTCATCCGGGACCACCCACTCATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCCCTGCTGGTCACTACAGATACAGCCTATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 90 bp CCTGGGCCAGGATGCACTCTGAGCAGCTCTGGAGACGGCCACAGTTaGTTGTATTCACTTGTGTCACCTCAGTACGGGAGCCAACCAGGA +
Preference number: 1 (lower is better)
Translates to: PGPGCTLSSSGDGHS*LYSLVSPQYGSQPG
Trigger: TCCTGGTTGGCTCCCGTACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 90 bp GTGTCCATCCTCTGTCCCCAGGTAGAGCACATCATACTCTTTCCCTaGGAGGCTGGTCACCCTGTGGGCCACGACTCTGAGATAGGCTGT +
Preference number: 1 (lower is better)
Translates to: VSILCPQVEHIILFP*EAGHPVGHDSEIGC
Trigger: ACAGCCTATCTCAGAGTCGTGGCCCACAGGGTGACCAGCCTCTCAGGGAAAGAGTATGATGTGCTCTACCTGGGGACAGAGGATGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR GCA 90 bp AACTTGAAGAATAAGCAGAACCACCCCAAGGACTCAGGGCACATTTaGCCCCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAA +
Preference number: 1 (lower is better)
Translates to: NLKNKQNHPKDSGHI*PQPPPGLFLPARLQ
Trigger: TTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGGGCAAATGTGCCCTGAGTCCTTGGGGTGGTTCTGCTTATTCTTCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
3UTR CCA 90 bp TGTCCGAATCCAGTCCTCGGCACGACCCACTGCTCTGGTGATAATTaGCTCCGTCCCCAGGTAGTTTTTCACAGTGGCAGCATAGAGGAC +
Preference number: 1 (lower is better)
Translates to: CPNPVLGTTHCSGDN*LRPQVVFHSGSIED
Trigger: GTCCTCTATGCTGCCACTGTGAAAAACTACCTGGGGACGGAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAGGACTGGATTCGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458114.5
3UTR TCA 90 bp CTCAGCCATCTTCAGGGTGGTCATCCCTCTCCCAAGAATTCCACATaGATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATC +
Preference number: 1 (lower is better)
Translates to: LSHLQGGHPSPKNST*IQGAHVAPSKGQKI
Trigger: GATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATTCATGTGGAATTCTTGGGAGAGGGATGACCACCCTGAAGATGGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR GCA 90 bp GGAAGGCAAGGTATCTGTCCGAATCCAGTCCTCGGCACGACCCACTaGTCTGGTGATAATTGGCTCCGTCCCCAGGTAGTTTTTCACAGT +
Preference number: 1 (lower is better)
Translates to: GRQGICPNPVLGTTH*SGDNWLRPQVVFHS
Trigger: ACTGTGAAAAACTACCTGGGGACGGAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAGGACTGGATTCGGACAGATACCTTGCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458114.5
3UTR CCA 90 bp GATGTTTCATCACATGTGGCTAGAGGAGCCCCAGTTAGCCGAATGTaGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAAT +
Preference number: 1 (lower is better)
Translates to: DVSSHVARGAPVSRM*AGLGQGSSRKGGEN
Trigger: ATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGGGGCTCCTCTAGCCACATGTGATGAAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 90 bp ACTAGTGGTCATTTGCCCAGCTCTAGATGGATGTTTCATCACATGTaGCTAGAGGAGCCCCAGTTAGCCGAATGTGGGCTGGGCTTGGGC +
Preference number: 1 (lower is better)
Translates to: TSGHLPSSRWMFHHM*LEEPQLAECGLGLG
Trigger: GCCCAAGCCCAGCCCACATTCGGCTAACTGGGGCTCCTCTAGCCACATGTGATGAAACATCCATCTAGAGCTGGGCAAATGACCACTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR TCA 90 bp CCCCGCACACACACGGGCCACCCGTGGGACTTTAATGCGCTCGTATaGGTCAAATGCTCGGGAAGTCTCCGTAAAGAAGAAGTAGATTTC +
Preference number: 1 (lower is better)
Translates to: PRTHTGHPWDFNALV*VKCSGSLRKEEVDF
Trigger: GAAATCTACTTCTTCTTTACGGAGACTTCCCGAGCATTTGACTCATACGAGCGCATTAAAGTCCCACGGGTGGCCCGTGTGTGTGCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR GCA 90 bp ACACAGGATGCCCATGCTGAGCTTGGAGAACATGGCAAGACCACATaGGCAGCTGTAGCCACGGGAACTTCAAACACTACTGGACGTTCT +
Preference number: 1 (lower is better)
Translates to: TQDAHAELGEHGKTT*AAVATGTSNTTGRS
Trigger: AGAACGTCCAGTAGTGTTTGAAGTTCCCGTGGCTACAGCTGCGCATGTGGTCTTGCCATGTTCTCCAAGCTCAGCATGGGCATCCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR GCA 90 bp GGCAGGATCCACAAGGAGAACAGAGTAATTGTATGTGTGAGGGACTaGGAACCGGGTGAGACAGGAGTCAGCCTCTCAGCAGAGTCTAAA +
Preference number: 1 (lower is better)
Translates to: GRIHKENRVIVCVRD*EPGETGVSLSAESK
Trigger: TTTAGACTCTGCTGAGAGGCTGACTCCTGTCTCACCCGGTTCGCAGTCCCTCACACATACAATTACTCTGTTCTCCTTGTGGATCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416236.5
3UTR TCA 90 bp TGTCCACGACAGGCAGTCCTCTGTTGCAGTCATGTTTTAGTTCTCTaGAGGGACCATTCAGCACTGTCCGAATGTCTTGTGGTCGGAAGG +
Preference number: 1 (lower is better)
Translates to: CPRQAVLCCSHVLVL*RDHSALSECLVVGR
Trigger: CCTTCCGACCACAAGACATTCGGACAGTGCTGAATGGTCCCTTCAGAGAACTAAAACATGACTGCAACAGAGGACTGCCTGTCGTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 90 bp GTGCGAGTGGTCAAGCAGGAAGAGGTCTTGACGTTTGGTAAGAGCTaGCAATGTCATCAAATACACATAGAGCTCAGCTTCCAGGGACTG +
Preference number: 1 (lower is better)
Translates to: VRVVKQEEVLTFGKS*QCHQIHIELSFQGL
Trigger: CAGTCCCTGGAAGCTGAGCTCTATGTGTATTTGATGACATTGTCAGCTCTTACCAAACGTCAAGACCTCTTCCTGCTTGACCACTCGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR TCA 90 bp CAGACATGCAACGTGCCTAATGAAGGCCTGAGGCCTCAGCCTCCCTaGCTAGACAGGTCCAATCATCCTTCTCAATCATTAATCTTCAGA +
Preference number: 1 (lower is better)
Translates to: QTCNVPNEGLRPQPP*LDRSNHPSQSLIFR
Trigger: TCTGAAGATTAATGATTGAGAAGGATGATTGGACCTGTCTAGTCAGGGAGGCTGAGGCCTCAGGCCTTCATTAGGCACGTTGCATGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CCA 90 bp CCGTCCTCACCTCGGGGAAAGCCACTTCTGCCTTCTCTCTTCTTATaGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTG +
Preference number: 1 (lower is better)
Translates to: PSSPRGKPLLPSLFL*RKELELTYQTHLSV
Trigger: CACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTCCCCGAGGTGAGGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CCA 90 bp TCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCTCTAGATaGATGTTTCATCACATGTGGCTAGAGGAGCCCCAGTTAGCCGAA +
Preference number: 1 (lower is better)
Translates to: SSDHLYTSGHLPSSR*MFHHMWLEEPQLAE
Trigger: TTCGGCTAACTGGGGCTCCTCTAGCCACATGTGATGAAACATCCATCTAGAGCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR GCA 90 bp TCCCCATCCCTCATAAATATTCCTAAGCATCGGCCCAGTCATTCATaGACATGTGGCCAGGTCTCTTATGAACACTATGTATTTACACGT +
Preference number: 1 (lower is better)
Translates to: SPSLINIPKHRPSHS*TCGQVSYEHYVFTR
Trigger: ACGTGTAAATACATAGTGTTCATAAGAGACCTGGCCACATGTGCATGAATGACTGGGCCGATGCTTAGGAATATTTATGAGGGATGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR TCA 90 bp TATGAACACTATGTATTTACACGTACTCTTTCATGGAAGGAAAACTaGGATGGGGAAGATCTCAGGGCAGAGACTCCATATTGCAACATG +
Preference number: 1 (lower is better)
Translates to: YEHYVFTRTLSWKEN*DGEDLRAETPYCNM
Trigger: CATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTCCCCATCTCAGTTTTCCTTCCATGAAAGAGTACGTGTAAATACATAGTGTTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp CCAGCCAGTCCCGCCCCCACTGTGTGGGCCCGGCTCGGAGCATCTCGCTGGCTGGCTCCAGGCACAGACTaGGTCCTGGGCCAGGATGCA +
Preference number: 2 (lower is better)
Translates to: PASPAPTVWARLGASRWLAPGTD*VLGQDA
Trigger: TGCATCCTGGCCCAGGACCCAGTCTGTGCCTGGAGC...CAGCCAGCGAGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGGACTGGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp GAAGCCAGCCAGTCCCGCCCCCACTGTGTGGGCCCGGCTCGGAGCATCTCGCTGGGTCCTGGGCCAGGATaGACTCTGAGCAGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: EASQSRPHCVGPARSISLGPGPG*TLSSSG
Trigger: TCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGGACC...CAGCGAGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGGACTGGCTGGCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp CTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGAGGGTCCGGTGCTCCCCGGCATaGGCCACACACTCATCCAGC +
Preference number: 2 (lower is better)
Translates to: LGQGQRQPLIFRRGGGRVRCSPA*ATHSSS
Trigger: GCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCG...GACCCTCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR TCA 90 bp CAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGCTCCAGGCCAGGATGCACTCTaGGCAGCTCTGGAGACGGCC +
Preference number: 2 (lower is better)
Translates to: QPSVLPGMGHTLIQPEAPGQDAL*AALETA
Trigger: GGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCC...TGGAGCTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp CAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGCTCCATGGACCAACCCTCGGTaGTCCCCGGCATGGGCCACA +
Preference number: 2 (lower is better)
Translates to: QPSVLPGMGHTLIQPEAPWTNPR*SPAWAT
Trigger: TGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCA...TGGAGCTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp CTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGAGGGTCAACGTCGTCCATCTCTaGTGGAGGGTCTTCCGGCCC +
Preference number: 2 (lower is better)
Translates to: LGQGQRQPLIFRRGGGRVNVVHL*WRVFRP
Trigger: GGGCCGGAAGACCCTCCAGCAGAGATGGACGACGTT...GACCCTCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp CCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGCTCCAGGCAGGTCCTGGGCCAGGATaGACTCTGAGCAGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: PRCSPAWATHSSSRKLQAGPGPG*TLSSSG
Trigger: TCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGGACC...TGCCTGGAGCTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp TGGACCAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGAGCTCCGATCCGCACTaGTCGGTGGAGGTGTCCATC +
Preference number: 2 (lower is better)
Translates to: WTNPRCSPAWATHSSSRKSSDPH*SVEVSI
Trigger: GATGGACACCTCCACCGAGCAGTGCGGATCGGAGCT...CTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp GATGCTGCGAGAATCCCCAAGAAGAAGCCAGCCAGTCCCGCCCCCACTGTGTGGGTCGTCCATCTCTGCTaGAGGGTCTTCCGGCCCCCG +
Preference number: 2 (lower is better)
Translates to: DAARIPKKKPASPAPTVWVVHLC*RVFRPP
Trigger: CGGGGGCCGGAAGACCCTCCAGCAGAGATGGACGAC...CCACACAGTGGGGGCGGGACTGGCTGGCTTCTTCTTGGGGATTCTCGCAGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp AGGGAGGGTCTTGGCTGTAGCTTGTGGTCCCAGAAGGTGGAGCCCCCAGGTCCAGTCGTCCATCTCTGCTaGAGGGTCTTCCGGCCCCCG +
Preference number: 2 (lower is better)
Translates to: REGLGCSLWSQKVEPPGPVVHLC*RVFRPP
Trigger: CGGGGGCCGGAAGACCCTCCAGCAGAGATGGACGAC...TGGACCTGGGGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAGACCCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp CAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGCTCCATGGCCTGTCCATGAGTaGGTGGTCCCGGATGAAGGT +
Preference number: 2 (lower is better)
Translates to: QPSVLPGMGHTLIQPEAPWPVHE*VVPDEG
Trigger: ACCTTCATCCGGGACCACCCACTCATGGACAGGCCA...TGGAGCTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR TCA 90 bp CCAGCCAGTCCCGCCCCCACTGTGTGGGCCCGGCTCGGAGCATCTCGCTGGCTGCATGTTTTAGTTCTCTaGAGGGACCATTCAGCACTG +
Preference number: 2 (lower is better)
Translates to: PASPAPTVWARLGASRWLHVLVL*RDHSAL
Trigger: CAGTGCTGAATGGTCCCTTCAGAGAACTAAAACATG...CAGCCAGCGAGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGGACTGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR TCA 90 bp CCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGCTCCAGGCAGCTTCATGTTGTTGGTaGTGCACTCTCCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: PRCSPAWATHSSSRKLQAASCCW*CTLQVW
Trigger: CCAGACCTGGAGAGTGCATCACCAACAACATGAAGC...TGCCTGGAGCTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp AGGGAGGGTCTTGGCTGTAGCTTGTGGTCCCAGAAGGTGGAGCCCCCAGGTCCAGACTCAGGGCACATTTaGCCCCAACCACCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: REGLGCSLWSQKVEPPGPDSGHI*PQPPPG
Trigger: CCCTGGAGGTGGTTGGGGGCAAATGTGCCCTGAGTC...TGGACCTGGGGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAGACCCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR GCA 90 bp CCCCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGCTCAAGGCCACGGCTaGGACAAAGGCTGGGGCGTT +
Preference number: 2 (lower is better)
Translates to: PQPPPGLFLPARLQPESKAQGHG*DKGWGV
Trigger: AACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGC...TTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR CCA 90 bp AGGGGGTGGCCATCAGCTGGAAACACTGGCCTGTCCATGAGTGGGTGGTCCCGGGTGACCAGCAGGGGGTaGCCATCAGCTGGAAACACT +
Preference number: 2 (lower is better)
Translates to: RGWPSAGNTGLSMSGWSRVTSRG*PSAGNT
Trigger: AGTGTTTCCAGCTGATGGCCACCCCCTGCTGGTCAC...CCGGGACCACCCACTCATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR TCA 90 bp TTCACAGGCATAAGCGCCCATGGCCCCTGGGGTCACCACCACCTCCAGTCCATCAGGCAGGGAGAGAGATaGGCCAAAGTGCCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: FTGISAHGPWGHHHLQSIRQGER*AKVPEL
Trigger: AAGCTCCGGCACTTTGGCTCATCTCTCTCCCTGCCT...GATGGACTGGAGGTGGTGGTGACCCCAGGGGCCATGGGCGCTTATGCCTGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp GATGCTGCGAGAATCCCCAAGAAGAAGCCAGCCAGTCCCGCCCCCACTGTGTGGCATGGCAAGACCACATaGGCAGCTGTAGCCACGGGA +
Preference number: 2 (lower is better)
Translates to: DAARIPKKKPASPAPTVWHGKTT*AAVATG
Trigger: TCCCGTGGCTACAGCTGCGCATGTGGTCTTGCCATG...CCACACAGTGGGGGCGGGACTGGCTGGCTTCTTCTTGGGGATTCTCGCAGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp GTCCCAGAAGGTGGAGCCCCCAGGTCCAGGCCCACCTTGTCTCTAGCCAGAAGTGGGGTGGCCATCAGCTaGAAACACTGGCCTGTCCAT +
Preference number: 2 (lower is better)
Translates to: VPEGGAPRSRPTLSLARSGVAIS*KHWPVH
Trigger: ATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCC...ACTTCTGGCTAGAGACAAGGTGGGCCTGGACCTGGGGGCTCCACCTTCTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp CCACCAAAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCACACTCTGAGCAGCTCTaGAGACGGCCACAGTTGGTT +
Preference number: 2 (lower is better)
Translates to: PPKPLPLLARASGNRSSSHSEQL*RRPQLV
Trigger: AACCAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTG...TGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR TCA 90 bp CCCCAGGTCCAGGCCCACCTTGTCTCTAGCCAGAAGTTCCCTCTGTCGCCGTCGATCATACTCTTTCCCTaGGAGGCTGGTCACCCTGTG +
Preference number: 2 (lower is better)
Translates to: PQVQAHLVSSQKFPLSPSIILFP*EAGHPV
Trigger: CACAGGGTGACCAGCCTCTCAGGGAAAGAGTATGAT...CGACGGCGACAGAGGGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR TCA 90 bp AGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCATCCTCTGTCCCCAGGTAGAGGATCTTCAAGAACGCTaGGCTGAGCTCCGATCCGCA +
Preference number: 2 (lower is better)
Translates to: SSDPHCSVEVSILCPQVEDLQER*AELRSA
Trigger: TGCGGATCGGAGCTCAGCTCAGCGTTCTTGAAGATC...CTCTACCTGGGGACAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp GATGCTGCGAGAATCCCCAAGAAGAAGCCAGCCAGTCCCGCCCCCACTGTGTGGTACCAAGCTGTAAGCTaGTACCACATGGGCTGCCCC +
Preference number: 2 (lower is better)
Translates to: DAARIPKKKPASPAPTVWYQAVS*YHMGCP
Trigger: GGGGCAGCCCATGTGGTAGCAGCTTACAGCTTGGTA...CCACACAGTGGGGGCGGGACTGGCTGGCTTCTTCTTGGGGATTCTCGCAGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp GAAGGTGGAGCCCCCAGGTCCAGGCCCACCTTGTCTCTAGCCAGAAGTTCCCTCGAGCATCTCGCTGGCTaGCCCATACCAAGCTGTAAG +
Preference number: 2 (lower is better)
Translates to: EGGAPRSRPTLSLARSSLEHLAG*PIPSCK
Trigger: CTTACAGCTTGGTATGGGGCAGCCAGCGAGATGCTC...GAGGGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCTGGGGGCTCCACCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp AACGCTGAGCTGAGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCATCCTCTGTTCTCCAGGTCTGGGCTaGGGCACATCATTGTCCACG +
Preference number: 2 (lower is better)
Translates to: NAELSSDPHCSVEVSILCSPGLG*GTSLST
Trigger: CGTGGACAATGATGTGCCCCAGCCCAGACCTGGAGA...ACAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp AGGGAGGGTCTTGGCTGTAGCTTGTGGTCCCAGAAGGTGGAGCCCCCAGGTCCACTGTCCATGAGTGGGTaGTCCCGGATGAAGGTGAGT +
Preference number: 2 (lower is better)
Translates to: REGLGCSLWSQKVEPPGPLSMSG*SRMKVS
Trigger: ACTCACCTTCATCCGGGACCACCCACTCATGGACAG...TGGACCTGGGGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAGACCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp GCCGAATGTGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAATCGCACAGACTGGGTCCTaGGCCAGGATGCACTCTGAG +
Preference number: 2 (lower is better)
Translates to: AECGLGLGKDQAGRVVRIAQTGS*ARMHSE
Trigger: CTCAGAGTGCATCCTGGCCCAGGACCCAGTCTGTGC...GATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp AGGGAGGGTCTTGGCTGTAGCTTGTGGTCCCAGAAGGTGGAGCCCCCAGGTCCAGCTGACTCTATGTCTTaGACCAACCCTCGGTGCTCC +
Preference number: 2 (lower is better)
Translates to: REGLGCSLWSQKVEPPGPADSMS*TNPRCS
Trigger: GGAGCACCGAGGGTTGGTCCAAGACATAGAGTCAGC...TGGACCTGGGGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAGACCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CAA 90 bp GGGCCAGGATGCACTCTGAGCAGCTCTGGAGACGGCCACAGTTGGTaGTATTCACTTGTGTCACCTCAGTACGGGAGCCAACCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: GPGCTLSSSGDGHSW*YSLVSPQYGSQPGA
Trigger: GGCTCCTGGTTGGCTCCCGTACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR TCA 90 bp GATGCTGCGAGAATCCCCAAGAAGAAGCCAGCCAGTCCCGCCCCCACTGTGTGGGTTAGGGGGAAGCCCTaGTTTGCTGCAGAAAGCAGT +
Preference number: 2 (lower is better)
Translates to: DAARIPKKKPASPAPTVWVRGKP*FAAESS
Trigger: ACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAAC...CCACACAGTGGGGGCGGGACTGGCTGGCTTCTTCTTGGGGATTCTCGCAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR TCA 90 bp CCCCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAAGAGCTGCCACAGAGTaGTGCCATCCTAACTTGGCC +
Preference number: 2 (lower is better)
Translates to: PQPPPGLFLPARLQPESKRAATE*CHPNLA
Trigger: GGCCAAGTTAGGATGGCATCACTCTGTGGCAGCTCT...TTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR GCA 90 bp AAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGCGAGTGGTCAAGCAGGGACTCAGGGCACATTTaGCCCCAACCACCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: KTRTQQEKPRAMCEWSSRDSGHI*PQPPPG
Trigger: CCCTGGAGGTGGTTGGGGGCAAATGTGCCCTGAGTC...CCTGCTTGACCACTCGCACATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR GCA 90 bp CCCCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAACGGCCCAGTCATTCATaGACATGTGGCCAGGTCTCT +
Preference number: 2 (lower is better)
Translates to: PQPPPGLFLPARLQPESKRPSHS*TCGQVS
Trigger: AGAGACCTGGCCACATGTGCATGAATGACTGGGCCG...TTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR GCA 90 bp TCGCTGCTGACGCCGACCAATCAGAATGAGAGTCAGGGATGCTGCGAGAATCCCAACGTCGTCCATCTCTaGTGGAGGGTCTTCCGGCCC +
Preference number: 2 (lower is better)
Translates to: SLLTPTNQNESQGCCENPNVVHL*WRVFRP
Trigger: GGGCCGGAAGACCCTCCAGCAGAGATGGACGACGTT...GGGATTCTCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGCGTCAGCAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp CCACCAAAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCATGCTCTGGTGATAATTaGCTCCGTCCCCAGGTAGTT +
Preference number: 2 (lower is better)
Translates to: PPKPLPLLARASGNRSSSCSGDN*LRPQVV
Trigger: AACTACCTGGGGACGGAGCCAATTATCACCAGAGCA...TGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp TATGTCTTGGACCAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCTGTCCATGAGTGGGTaGTCCCGGATGAAGGTGAGT +
Preference number: 2 (lower is better)
Translates to: YVLDQPSVLPGMGHTLIQLSMSG*SRMKVS
Trigger: ACTCACCTTCATCCGGGACCACCCACTCATGGACAG...CTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCAAGACATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp GCCGAATGTGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAATCCACACGGGCCACCCGTaGGACTTTAATGCGCTCGTA +
Preference number: 2 (lower is better)
Translates to: AECGLGLGKDQAGRVVRIHTGHP*DFNALV
Trigger: TACGAGCGCATTAAAGTCCCACGGGTGGCCCGTGTG...GATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR CAA 90 bp TCCTGGGCCAGGATGCACTCTGAGCAGCTCTGGAGACGGCCACAGTaGGTTGTATTCACTTGTGTCACCTCAGTACGGGAGCCAACCAGG +
Preference number: 2 (lower is better)
Translates to: SWARMHSEQLWRRPQ*VVFTCVTSVREPTR
Trigger: CCTGGTTGGCTCCCGTACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CAA 90 bp CACATGTGGCTAGAGGAGCCCCAGTTAGCCGAATGTGGGCTGGGCTaGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAATCCACCAAAGC +
Preference number: 2 (lower is better)
Translates to: HMWLEEPQLAECGLG*GKDQAGRVVRIHQS
Trigger: GCTTTGGTGGATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGGGGCTCCTCTAGCCACATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp AAACTCCCATCCCCGTCCTCACCTCGGGGAAAGCCACTTCTGCCTTCTCTCTTCGGTCATGTGTACTGCTaGCCTTCCCACCCGGAAGGT +
Preference number: 2 (lower is better)
Translates to: KLPSPSSPRGKPLLPSLFGHVYC*PSHPEG
Trigger: ACCTTCCGGGTGGGAAGGGCAGCAGTACACATGACC...GAAGAGAGAAGGCAGAAGTGGCTTTCCCCGAGGTGAGGACGGGGATGGGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAGAGAACTCAGAGGCTaGGATGGTCTTCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: APGMNEAHSQAKTRTQQERELRG*DGLPGP
Trigger: TGGGCCTGGAAGACCATCCCAGCCTCTGAGTTCTCT...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp TGGAGCCCCCAGGTCCAGGCCCACCTTGTCTCTAGCCAGAAGTTCCCTCTGTCGAGATGCCATAAAAGATaGGAGTCCCTGCCCCAAGCT +
Preference number: 2 (lower is better)
Translates to: WSPQVQAHLVSSQKFPLSRCHKR*ESLPQA
Trigger: AGCTTGGGGCAGGGACTCCCATCTTTTATGGCATCT...CGACAGAGGGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCTGGGGGCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp CATGAGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCAGGCAGGGAGAGAGATGTCCGAATGTCTTGTaGTCGGAAGGCACAGACAGC +
Preference number: 2 (lower is better)
Translates to: HEWVVPDEGEYAVRQGERCPNVL*SEGTDS
Trigger: GCTGTCTGTGCCTTCCGACCACAAGACATTCGGACA...TCTCTCTCCCTGCCTGACCGCGTACTCACCTTCATCCGGGACCACCCACTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp GGGGGTGAGTGCAGTCACTCCACTGGGCTGGTGCCACACACAGGATGCCCATGCGGAGACGGCCACAGTTaGTTGTATTCACTTGTGTCA +
Preference number: 2 (lower is better)
Translates to: GGECSHSTGLVPHTGCPCGDGHS*LYSLVS
Trigger: TGACACAAGTGAATACAACCAACTGTGGCCGTCTCC...GCATGGGCATCCTGTGTGTGGCACCAGCCCAGTGGAGTGACTGCACTCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR TCA 90 bp GGACTGGAGAAACAAGAAGGCCTCCAGCAGCTACCAGTCCAGGGACTGGCCACAGTTAGGGGGAAGCCCTaGTTTGCTGCAGAAAGCAGT +
Preference number: 2 (lower is better)
Translates to: GLEKQEGLQQLPVQGLATVRGKP*FAAESS
Trigger: ACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAAC...TGTGGCCAGTCCCTGGACTGGTAGCTGCTGGAGGCCTTCTTGTTTCTCCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp CCCCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAAGCAGGAAGAGGTCTTaGCGTTTGGTAAGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: PQPPPGLFLPARLQPESKSRKRS*RLVRAD
Trigger: GTCAGCTCTTACCAAACGTCAAGACCTCTTCCTGCT...TTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp GAAGGTGGAGCCCCCAGGTCCAGGCCCACCTTGTCTCTAGCCAGAAGTTCCCTCAGAGGAGACATCTGCTaGCTCTATGTCTTGGACCAA +
Preference number: 2 (lower is better)
Translates to: EGGAPRSRPTLSLARSSLRGDIC*LYVLDQ
Trigger: TTGGTCCAAGACATAGAGTCAGCAGATGTCTCCTCT...GAGGGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCTGGGGGCTCCACCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp GGAGCCCCAGTTAGCCGAATGTGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGCAACATGGGGATCATaGACTCCCCACAGATTCAGA +
Preference number: 2 (lower is better)
Translates to: GAPVSRMWAGLGQGSSRKATWGS*TPHRFR
Trigger: TCTGAATCTGTGGGGAGTGCATGATCCCCATGTTGC...CTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGGGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR GCA 90 bp GGGATAAAGCGAAGATGGTGTCCCGGGCGCCAACATAAAGTGTGTGGGAGGCAGGTATGTGTGAGGGACTaGGAACCGGGTGAGACAGGA +
Preference number: 2 (lower is better)
Translates to: GIKRRWCPGRQHKVCGRQVCVRD*EPGETG
Trigger: TCCTGTCTCACCCGGTTCGCAGTCCCTCACACATAC...CTGCCTCCCACACACTTTATGTTGGCGCCCGGGACACCATCTTCGCTTTATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416236.5
3UTR-3UTR GCA 90 bp TGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAATCCACCAAAGCTCGGCACGACCCACTaGTCTGGTGATAATTGGCTC +
Preference number: 2 (lower is better)
Translates to: WAGLGQGSSRKGGENPPKLGTTH*SGDNWL
Trigger: GAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAG...CTTTGGTGGATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp GTGGCTAGAGGAGCCCCAGTTAGCCGAATGTGGGCTGGGCTTGGGCAAGGATCAGAGAGTCAGGGATGCTaGGAGAATCCCCAAGAAGAA +
Preference number: 2 (lower is better)
Translates to: VARGAPVSRMWAGLGQGSESQGC*ENPQEE
Trigger: TTCTTCTTGGGGATTCTCGCAGCATCCCTGACTCTC...TGATCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGGGGCTCCTCTAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp TCGCTGCTGACGCCGACCAATCAGAATGAGAGTCAGGGATGCTGCGAGAATCCCCCCCCAGCATCTCAGTaGTCACTCCGTTCCAGTGAT +
Preference number: 2 (lower is better)
Translates to: SLLTPTNQNESQGCCENPPPASQ*SLRSSD
Trigger: ATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG...GGGATTCTCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGCGTCAGCAGCGA
57% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR CCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGAGAGAACTCAGAGGCTaGGATGGTCTTCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMRELRG*DGLPGP
Trigger: TGGGCCTGGAAGACCATCCCAGCCTCTGAGTTCTCT...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp ACTGGGTCCTGGGCCAGGATGCACTCTGAGCAGCTCTGGAGACGGCCACAGTTGGAAGGAAAACTGAGATaGGGAAGATCTCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: TGSWARMHSEQLWRRPQLEGKLR*GRSQGR
Trigger: TCTGCCCTGAGATCTTCCCCATCTCAGTTTTCCTTC...CAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGGACCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR CCA 90 bp TCATCCAAGCCCATACAGAGGGTGAGCAGCTCCCTCCTTCCACACCAAGCATGGTACCAGTCCAGGGACTaGCCACAGTCAGTCAGACTC +
Preference number: 2 (lower is better)
Translates to: SSKPIQRVSSSLLPHQAWYQSRD*PQSVRL
Trigger: GAGTCTGACTGACTGTGGCCAGTCCCTGGACTGGTA...CCATGCTTGGTGTGGAAGGAGGGAGCTGCTCACCCTCTGTATGGGCTTGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAGAGCCATGTGCGAGTaGTCAAGCAGGAAGAGGTCT +
Preference number: 2 (lower is better)
Translates to: APGMNEAHSQAKTRTQQERAMCE*SSRKRS
Trigger: AGACCTCTTCCTGCTTGACCACTCGCACATGGCTCT...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp AACGCTGAGCTGAGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCATCCTCTGTTGCTCTGGTGATAATTaGCTCCGTCCCCAGGTAGTT +
Preference number: 2 (lower is better)
Translates to: NAELSSDPHCSVEVSILCCSGDN*LRPQVV
Trigger: AACTACCTGGGGACGGAGCCAATTATCACCAGAGCA...ACAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp TGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGAGGGTCTTAACTTCAAACACTACTaGACGTTCTCCAGGCTCTTT +
Preference number: 2 (lower is better)
Translates to: WPGPAATAHLQERGREGLNFKHY*TFSRLF
Trigger: AAAGAGCCTGGAGAACGTCCAGTAGTGTTTGAAGTT...AAGACCCTCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR TCA 90 bp AAACTCCCATCCCCGTCCTCACCTCGGGGAAAGCCACTTCTGCCTTCTCTCTTCCCAAGGGGACTCTTTTaGGTAGTTCACAGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: KLPSPSSPRGKPLLPSLFPRGLF*VVHRLL
Trigger: CAGCAGCCTGTGAACTACTCAAAAGAGTCCCCTTGG...GAAGAGAGAAGGCAGAAGTGGCTTTCCCCGAGGTGAGGACGGGGATGGGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp CACACACGGGCCACCCGTGGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGCTACAGTTCTGTCTGTaGGCCTCAGGAACCATCCAG +
Preference number: 2 (lower is better)
Translates to: HTRATRGTLMRSYESNARLQFCL*ASGTIQ
Trigger: CTGGATGGTTCCTGAGGCTCACAGACAGAACTGTAG...CCGAGCATTTGACTCATACGAGCGCATTAAAGTCCCACGGGTGGCCCGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458114.5
3UTR-3UTR TCA 90 bp TGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAATCCACCAAAGATCATACTCTTTCCCTaGGAGGCTGGTCACCCTGTG +
Preference number: 2 (lower is better)
Translates to: WAGLGQGSSRKGGENPPKIILFP*EAGHPV
Trigger: CACAGGGTGACCAGCCTCTCAGGGAAAGAGTATGAT...CTTTGGTGGATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR TCA 90 bp TCGCTGCTGACGCCGACCAATCAGAATGAGAGTCAGGGATGCTGCGAGAATCCCACAGGATGCCCATGCTaGGCTTGGAGAACATGGCAA +
Preference number: 2 (lower is better)
Translates to: SLLTPTNQNESQGCCENPTGCPC*AWRTWQ
Trigger: TTGCCATGTTCTCCAAGCTCAGCATGGGCATCCTGT...GGGATTCTCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGCGTCAGCAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGCTAACTTGGCCTCAGTaGAGTAACCTCAGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQLTWPQ*SNLRAV
Trigger: CACTGCCCTGAGGTTACTGCACTGAGGCCAAGTTAG...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR GCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAGCACAGCAACATCCTaGAGGACACTGGAGGCCCGG +
Preference number: 2 (lower is better)
Translates to: QRSGPKPIQAQREQILKSSTATS*RTLEAR
Trigger: CCGGGCCTCCAGTGTCCTGCAGGATGTTGCTGTGCT...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR GCA 90 bp GGAGCCCCAGTTAGCCGAATGTGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGAGAGATGAGCCAAAGTaGCGGAGCTTCATGTTGTTG +
Preference number: 2 (lower is better)
Translates to: GAPVSRMWAGLGQGSSRKRDEPK*RSFMLL
Trigger: CAACAACATGAAGCTCCGGCACTTTGGCTCATCTCT...CTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAACTCAGAGGCTGGGATaGTCTTCCAGGCCCAGTGAC +
Preference number: 2 (lower is better)
Translates to: IRQRSGPKPIQAQREQILTQRLG*SSRPSD
Trigger: GTCACTGGGCCTGGAAGACCATCCCAGCCTCTGAGT...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
3UTR-3UTR CCA 90 bp GCTCAGGCCCTGGACAGAGCAGGTCAGCTTTCAAAAACGTCGTCCATCTCTGCTAGAGAACTCAGAGGCTaGGATGGTCTTCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: AQALDRAGQLSKTSSISARELRG*DGLPGP
Trigger: TGGGCCTGGAAGACCATCCCAGCCTCTGAGTTCTCT...AGCAGAGATGGACGACGTTTTTGAAAGCTGACCTGCTCTGTCCAGGGCCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR CCA 90 bp TCTGGAGACGGCCACAGTTGGTTGTATTCACTTGTGTCACCTCAGTACGGGAGCAATCAGGCAAAGGTCTaGCCCCAAGCCCATCCAGGC +
Preference number: 2 (lower is better)
Translates to: SGDGHSWLYSLVSPQYGSNQAKV*PQAHPG
Trigger: GCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT...GCTCCCGTACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR CCA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTGCTGTGACATGGCAGTaGTGGCAGCCAGGGGGTAAA +
Preference number: 2 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLAVTWQ*WQPGGK
Trigger: TTTACCCCCTGGCTGCCACCACTGCCATGTCACAGC...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGTGGGAGCCAAGGAAATaGGGTACAGCCTACACTCCA +
Preference number: 2 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQWEPRK*GTAYTP
Trigger: TGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCCA...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp TCTGGAGACGGCCACAGTTGGTTGTATTCACTTGTGTCACCTCAGTACGGGAGCGGGGTGGCCATCAGCTaGAAACACTGGCCTGTCCAT +
Preference number: 2 (lower is better)
Translates to: SGDGHSWLYSLVSPQYGSGVAIS*KHWPVH
Trigger: ATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCC...GCTCCCGTACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp GAGCCAACCAGGAGCCAGCTGTGGTACAATTTCATGTTCTCAACTGGCTGTGGCATCCGCACTGCTCGGTaGAGGTGTCCATCCTCTGTC +
Preference number: 2 (lower is better)
Translates to: EPTRSQLWYNFMFSTGCGIRTAR*RCPSSV
Trigger: GACAGAGGATGGACACCTCCACCGAGCAGTGCGGAT...GCCACAGCCAGTTGAGAACATGAAATTGTACCACAGCTGGCTCCTGGTTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp GGAGCCCCAGTTAGCCGAATGTGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGAGACGGCCACAGTTaGTTGTATTCACTTGTGTCA +
Preference number: 2 (lower is better)
Translates to: GAPVSRMWAGLGQGSSRKGDGHS*LYSLVS
Trigger: TGACACAAGTGAATACAACCAACTGTGGCCGTCTCC...CTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR TCA 90 bp AGATGGATGTTTCATCACATGTGGCTAGAGGAGCCCCAGTTAGCCGAATGTGGGAGGCAGGGAGAGAGATaGGCCAAAGTGCCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: RWMFHHMWLEEPQLAECGRQGER*AKVPEL
Trigger: AAGCTCCGGCACTTTGGCTCATCTCTCTCCCTGCCT...CCCACATTCGGCTAACTGGGGCTCCTCTAGCCACATGTGATGAAACATCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp AAACTCCCATCCCCGTCCTCACCTCGGGGAAAGCCACTTCTGCCTTCTCTCTTCGCAACATGGGGATCATaGACTCCCCACAGATTCAGA +
Preference number: 2 (lower is better)
Translates to: KLPSPSSPRGKPLLPSLFATWGS*TPHRFR
Trigger: TCTGAATCTGTGGGGAGTGCATGATCCCCATGTTGC...GAAGAGAGAAGGCAGAAGTGGCTTTCCCCGAGGTGAGGACGGGGATGGGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR GCA 90 bp GAGCCAACCAGGAGCCAGCTGTGGTACAATTTCATGTTCTCAACTGGCTGTGGCAAAGATGGGAGTCCCTaGCCCAAGCTCAGGTCGAAG +
Preference number: 2 (lower is better)
Translates to: EPTRSQLWYNFMFSTGCGKDGSP*PKLRSK
Trigger: CTTCGACCTGAGCTTGGGGCAGGGACTCCCATCTTT...GCCACAGCCAGTTGAGAACATGAAATTGTACCACAGCTGGCTCCTGGTTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp CTTCATGTTGTTGGTGATGCACTCTCCAGGTCTGGGCTGGGGCACATCATTGTCAAAGATGGGAGTCCCTaGCCCAAGCTCAGGTCGAAG +
Preference number: 2 (lower is better)
Translates to: LHVVGDALSRSGLGHIIVKDGSP*PKLRSK
Trigger: CTTCGACCTGAGCTTGGGGCAGGGACTCCCATCTTT...GACAATGATGTGCCCCAGCCCAGACCTGGAGAGTGCATCACCAACAACATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAACCCCCAGCATCTCAGTaGTCACTCCGTTCCAGTGAT +
Preference number: 2 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKPPASQ*SLRSSD
Trigger: ATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
3UTR-3UTR CCA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCAAATCAGGCAAAGGTCTaGCCCCAAGCCCATCCAGGC +
Preference number: 2 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPNQAKV*PQAHPG
Trigger: GCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
3UTR-3UTR CCA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGCTCCATATTGCAACATaGGGATCATGCACTCCCCAC +
Preference number: 2 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQLHIAT*GSCTPH
Trigger: GTGGGGAGTGCATGATCCCCATGTTGCAATATGGAG...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCAGCTGTGACATGGCAGTaGTGGCAGCCAGGGGGTAAA +
Preference number: 2 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPAVTWQ*WQPGGK
Trigger: TTTACCCCCTGGCTGCCACCACTGCCATGTCACAGC...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp CCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGCGAGTGGTCAAGCAGGAAGAGATGCCATCCTAACTTaGCCTCAGTGCAGTAACCTC +
Preference number: 2 (lower is better)
Translates to: PGLSRRSLEPCASGQAGRDAILT*PQCSNL
Trigger: GAGGTTACTGCACTGAGGCCAAGTTAGGATGGCATC...TCTTCCTGCTTGACCACTCGCACATGGCTCTAGGCTTCTCCTGCTGAGTCCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp TCTGTCTGTGAGCCTCAGGAACCATCCAGTCAATCCTGCGGGGTCTCTCCCCTGGCAGAGTCTAAAATGTaGATCGCCCCAATGATCACT +
Preference number: 2 (lower is better)
Translates to: SVCEPQEPSSQSCGVSPLAESKM*IAPMIT
Trigger: AGTGATCATTGGGGCGATTCACATTTTAGACTCTGC...CAGGGGAGAGACCCCGCAGGATTGACTGGATGGTTCCTGAGGCTCACAGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000416236.5
3UTR-3UTR GCA 90 bp AAACTCCCATCCCCGTCCTCACCTCGGGGAAAGCCACTTCTGCCTTCTCTCTTCGCAGAGACTCCATATTaGAACATGGGGATCATGCAC +
Preference number: 2 (lower is better)
Translates to: KLPSPSSPRGKPLLPSLFAETPY*NMGIMH
Trigger: GTGCATGATCCCCATGTTGCAATATGGAGTCTCTGC...GAAGAGAGAAGGCAGAAGTGGCTTTCCCCGAGGTGAGGACGGGGATGGGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR GCA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTCTAACTTGGCCTCAGTaGAGTAACCTCAGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLLTWPQ*SNLRAV
Trigger: CACTGCCCTGAGGTTACTGCACTGAGGCCAAGTTAG...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR GCA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTAAGCCTAGAGCCATGTaGGAGTGGTCAAGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLKPRAM*EWSSRK
Trigger: CTTCCTGCTTGACCACTCGCACATGGCTCTAGGCTT...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR GCA 90 bp ACCCGTGGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGGAAGTCTCCGTACTCGGCACGACCCACTaGTCTGGTGATAATTGGCTC +
Preference number: 2 (lower is better)
Translates to: TRGTLMRSYESNAREVSVLGTTH*SGDNWL
Trigger: GAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAG...TACGGAGACTTCCCGAGCATTTGACTCATACGAGCGCATTAAAGTCCCACGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446927.5
ENST00000458114.5
3UTR-3UTR CCA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAAGAGAACTCAGAGGCTaGGATGGTCTTCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: RQRSGPKPIQAQREQILKRELRG*DGLPGP
Trigger: TGGGCCTGGAAGACCATCCCAGCCTCTGAGTTCTCT...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
3UTR-3UTR CCA 90 bp TGGGGCACATCATTGTCCACGACAGGCAGTCCTCTGTTGCAGTCATGTTTTAGTGCCATGCTCAGGCCCTaGACAGAGCAGGTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: WGTSLSTTGSPLLQSCFSAMLRP*TEQVSF
Trigger: AAAGCTGACCTGCTCTGTCCAGGGCCTGAGCATGGC...ACTAAAACATGACTGCAACAGAGGACTGCCTGTCGTGGACAATGATGTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CCA 90 bp AGATGGATGTTTCATCACATGTGGCTAGAGGAGCCCCAGTTAGCCGAATGTGGGGCTGACTCTATGTCTTaGACCAACCCTCGGTGCTCC +
Preference number: 2 (lower is better)
Translates to: RWMFHHMWLEEPQLAECGADSMS*TNPRCS
Trigger: GGAGCACCGAGGGTTGGTCCAAGACATAGAGTCAGC...CCCACATTCGGCTAACTGGGGCTCCTCTAGCCACATGTGATGAAACATCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CAA 90 bp ATGGCTACAGGGTCTAAAGTTCTGCAGGCAACGCCCCCATTCCAATaGTCTCCCTCCCCATCCCTCATAAATATTCCTAAGCATCGGCCC +
Preference number: 2 (lower is better)
Translates to: MATGSKVLQATPPFQ*SPSPSLINIPKHRP
Trigger: GGGCCGATGCTTAGGAATATTTATGAGGGATGGGGAGGGAGACAATTGGAATGGGGGCGTTGCCTGCAGAACTTTAGACCCTGTAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCATAGGGGGCCAGGGATaGAGGTTTACAGGAGTTCAG +
Preference number: 2 (lower is better)
Translates to: QRSGPKPIQAQREQILKSIGGQG*RFTGVQ
Trigger: CTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTAT...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
3UTR-3UTR TCA 90 bp CATAAAGTGTGTGGGAGGCAGGATCCACAAGGAGAACAGAGTAATTGTATGTGTGGACTGCGAACCGGGTaGGACAGGAGTCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: HKVCGRQDPQGEQSNCMCGLRTG*DRSQPL
Trigger: GAGAGGCTGACTCCTGTCTCACCCGGTTCGCAGTCC...ACACATACAATTACTCTGTTCTCCTTGTGGATCCTGCCTCCCACACACTTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416236.5
3UTR-3UTR TCA 90 bp CTCAGTACGGGAGCCAACCAGGAGCCAGCTGTGGTACAATTTCATGTTCTCAACGCTTCATGTTGTTGGTaGTGCACTCTCCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: LSTGANQEPAVVQFHVLNASCCW*CTLQVW
Trigger: CCAGACCTGGAGAGTGCATCACCAACAACATGAAGC...GTTGAGAACATGAAATTGTACCACAGCTGGCTCCTGGTTGGCTCCCGTACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp CACACACAGGATGCCCATGCTGAGCTTGGAGAACATGGCAAGACCACATGCGCAGCAGAGACTCCATATTaGAACATGGGGATCATGCAC +
Preference number: 2 (lower is better)
Translates to: HTQDAHAELGEHGKTTCAAETPY*NMGIMH
Trigger: GTGCATGATCCCCATGTTGCAATATGGAGTCTCTGC...TGCGCATGTGGTCTTGCCATGTTCTCCAAGCTCAGCATGGGCATCCTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR GCA 90 bp TCAGCCATCTTCAGGGTGGTCATCCCTCTCCCAAGAATTCCACATGAATCCAGGAAGCCTAGAGCCATGTaGGAGTGGTCAAGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: SAIFRVVIPLPRIPHESRKPRAM*EWSSRK
Trigger: CTTCCTGCTTGACCACTCGCACATGGCTCTAGGCTT...CCTGGATTCATGTGGAATTCTTGGGAGAGGGATGACCACCCTGAAGATGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp TCAGCCATCTTCAGGGTGGTCATCCCTCTCCCAAGAATTCCACATGAATCCAGGTCAGCTTCCAGGGACTaGAGAAACAAGAAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: SAIFRVVIPLPRIPHESRSASRD*RNKKAS
Trigger: GGAGGCCTTCTTGTTTCTCCAGTCCCTGGAAGCTGA...CCTGGATTCATGTGGAATTCTTGGGAGAGGGATGACCACCCTGAAGATGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp GGTCATTTGCCCAGCTCTAGATGGATGTTTCATCACATGTGGCTAGAGGAGCCCATCAGCTGGAAACACTaGCCTGTCCATGAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: GHLPSSRWMFHHMWLEEPISWKH*PVHEWV
Trigger: CACCCACTCATGGACAGGCCAGTGTTTCCAGCTGAT...GGGCTCCTCTAGCCACATGTGATGAAACATCCATCTAGAGCTGGGCAAATGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR CCA 90 bp GGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGGAAGTCTCCGTAAAGAAGCACACGGGCCACCCGTaGGACTTTAATGCGCTCGTA +
Preference number: 2 (lower is better)
Translates to: GTLMRSYESNAREVSVKKHTGHP*DFNALV
Trigger: TACGAGCGCATTAAAGTCCCACGGGTGGCCCGTGTG...CTTCTTTACGGAGACTTCCCGAGCATTTGACTCATACGAGCGCATTAAAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446927.5
ENST00000458114.5
3UTR-3UTR TCA 90 bp GCCACCCGTGGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGGAAGTCTCCTTTAATGCGCTCGTATaGGTCAAATGCTCGGGAAGT +
Preference number: 2 (lower is better)
Translates to: ATRGTLMRSYESNAREVSFNALV*VKCSGS
Trigger: ACTTCCCGAGCATTTGACTCATACGAGCGCATTAAA...GGAGACTTCCCGAGCATTTGACTCATACGAGCGCATTAAAGTCCCACGGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446927.5
ENST00000458114.5
3UTR-3UTR GCA 90 bp ACAAAGAAAAGGATGGGGTCATGTGTACTGCTGCCCTTCCCACCCGGAAGGTCAGCAGAGACTCCATATTaGAACATGGGGATCATGCAC +
Preference number: 2 (lower is better)
Translates to: TKKRMGSCVLLPFPPGRSAETPY*NMGIMH
Trigger: GTGCATGATCCCCATGTTGCAATATGGAGTCTCTGC...TGACCTTCCGGGTGGGAAGGGCAGCAGTACACATGACCCCATCCTTTTCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR GCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTCAGGGTCTAAAGTTCTaGAGGCAACGCCCCCATTCC +
Preference number: 2 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVIQGLKF*RQRPHS
Trigger: GGAATGGGGGCGTTGCCTGCAGAACTTTAGACCCTG...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR GCA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTTGGGGTCATGTGTACTaGTGCCCTTCCCACCCGGAA +
Preference number: 2 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRWGHVY*CPSHPE
Trigger: TTCCGGGTGGGAAGGGCAGCAGTACACATGACCCCA...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTAATCAGGCAAAGGTCTaGCCCCAAGCCCATCCAGGC +
Preference number: 2 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRNQAKV*PQAHPG
Trigger: GCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp AAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGCGAGTGGTCAAGCAGGAAACAAAGAAAAGGATaGGGTCATGTGTACTGCTGC +
Preference number: 2 (lower is better)
Translates to: KTRTQQEKPRAMCEWSSRKQRKG*GHVYCC
Trigger: GCAGCAGTACACATGACCCCATCCTTTTCTTTGTTT...CCTGCTTGACCACTCGCACATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGATGCCATCCTAACTTaGCCTCAGTGCAGTAACCTC +
Preference number: 2 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVDAILT*PQCSNL
Trigger: GAGGTTACTGCACTGAGGCCAAGTTAGGATGGCATC...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp TCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTATTCAAAGGGGAAGGACTaGATCATTGACTGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: SRGLMWLPAKGRKSSGSYSKGKD*IIDWSL
Trigger: CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGA...ATAAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTGTTAGGGGGAAGCCCTaGTTTGCTGCAGAAAGCAGT +
Preference number: 2 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVIVRGKP*FAAESS
Trigger: ACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAAC...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGACCCTGAGTAGTCACTaGTTGCAAACGTATCTTTAT +
Preference number: 2 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQTLSSH*LQTYLY
Trigger: ATAAAGATACGTTTGCAATCAGTGACTACTCAGGGT...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGACTTTGTTAAGGCCTTaGAAATCTGACAAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: APGMNEAHSQAKTRTQQETLLRP*KSDKSH
Trigger: ATGGCTTTTGTCAGATTTTCAAGGCCTTAACAAAGT...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp CATTCTATACAAAGGGATCTCAGGCCACTAAGGTCAGACAGGTCTGAGGATTACAGAGCTGCCACAGAGTaGTGCCATCCTAACTTGGCC +
Preference number: 2 (lower is better)
Translates to: HSIQRDLRPLRSDRSEDYRAATE*CHPNLA
Trigger: GGCCAAGTTAGGATGGCATCACTCTGTGGCAGCTCT...GTAATCCTCAGACCTGTCTGACCTTAGTGGCCTGAGATCCCTTTGTATAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTCCCCCAGCATCTCAGTaGTCACTCCGTTCCAGTGAT +
Preference number: 2 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRPPASQ*SLRSSD
Trigger: ATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp AGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAGTGCTGAGGATGGGTaGCACGTCCTCGTGTTTTGG +
Preference number: 2 (lower is better)
Translates to: SHFCLLSSYGGRNWSLRISAEDG*HVLVFW
Trigger: CCAAAACACGAGGACGTGCCACCCATCCTCAGCACT...GATACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp TGGGGCACATCATTGTCCACGACAGGCAGTCCTCTGTTGCAGTCATGTTTTAGTAGATGCCATAAAAGATaGGAGTCCCTGCCCCAAGCT +
Preference number: 2 (lower is better)
Translates to: WGTSLSTTGSPLLQSCFSRCHKR*ESLPQA
Trigger: AGCTTGGGGCAGGGACTCCCATCTTTTATGGCATCT...ACTAAAACATGACTGCAACAGAGGACTGCCTGTCGTGGACAATGATGTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR TCA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCATGCTCGTATATCCTATaGCTGTTCCCCTTCTGTTGT +
Preference number: 2 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPCSYIL*LFPFCC
Trigger: ACAACAGAAGGGGAACAGTCATAGGATATACGAGCA...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp AAACTCCCATCCCCGTCCTCACCTCGGGGAAAGCCACTTCTGCCTTCTCTCTTCACTTTGTTAAGGCCTTaGAAATCTGACAAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: KLPSPSSPRGKPLLPSLFTLLRP*KSDKSH
Trigger: ATGGCTTTTGTCAGATTTTCAAGGCCTTAACAAAGT...GAAGAGAGAAGGCAGAAGTGGCTTTCCCCGAGGTGAGGACGGGGATGGGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp AGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCTTCCATTGGAAGGAATaGCTGAGGCAGGGTAGGCAG +
Preference number: 2 (lower is better)
Translates to: SHFCLLSSYGGRNWSLRIFHWKE*LRQGRQ
Trigger: CTGCCTACCCTGCCTCAGTCATTCCTTCCAATGGAA...GATACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTAAGCCTCCCGAGTAGCTaGGACTACAGGCCCCCGCCA +
Preference number: 2 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVSLPSS*DYRPPP
Trigger: TGGCGGGGGCCTGTAGTCCCAGCTACTCGGGAGGCT...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp GGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGGAAGTCTCCGTAAAGAAGTGCTCTGGTGATAATTaGCTCCGTCCCCAGGTAGTT +
Preference number: 2 (lower is better)
Translates to: GTLMRSYESNAREVSVKKCSGDN*LRPQVV
Trigger: AACTACCTGGGGACGGAGCCAATTATCACCAGAGCA...CTTCTTTACGGAGACTTCCCGAGCATTTGACTCATACGAGCGCATTAAAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446927.5
ENST00000458114.5
3UTR-3UTR CCA 90 bp AGCTGTAGCCACGGGAACTTCAAACACTACTGGACGTTCTCCAGGCTCTTTAGGACCAGGAGCCAGCTGTaGTACAATTTCATGTTCTCA +
Preference number: 2 (lower is better)
Translates to: SCSHGNFKHYWTFSRLFRTRSQL*YNFMFS
Trigger: TGAGAACATGAAATTGTACCACAGCTGGCTCCTGGT...CCTAAAGAGCCTGGAGAACGTCCAGTAGTGTTTGAAGTTCCCGTGGCTACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CAA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTaGCCCAGCTCTAGATGGATGTTTCATCACATGTGGCTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: QWSLRSSDHLYTSGH*PSSRWMFHHMWLEE
Trigger: CTCCTCTAGCCACATGTGATGAAACATCCATCTAGAGCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR TCA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTGCAAGGGTGTCACCCTaGGTAGTCACTGATTGCAAA +
Preference number: 2 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRARVSP*VVTDCK
Trigger: TTTGCAATCAGTGACTACTCAGGGTGACACCCTTGC...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp AGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAGCAGGAAGAGGTCTTaGCGTTTGGTAAGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: SHFCLLSSYGGRNWSLRISRKRS*RLVRAD
Trigger: GTCAGCTCTTACCAAACGTCAAGACCTCTTCCTGCT...GATACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp TGGGGCACATCATTGTCCACGACAGGCAGTCCTCTGTTGCAGTCATGTTTTAGTCATGTTTTAGTTCTCTaGAGGGACCATTCAGCACTG +
Preference number: 2 (lower is better)
Translates to: WGTSLSTTGSPLLQSCFSHVLVL*RDHSAL
Trigger: CAGTGCTGAATGGTCCCTTCAGAGAACTAAAACATG...ACTAAAACATGACTGCAACAGAGGACTGCCTGTCGTGGACAATGATGTGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR GCA 90 bp AGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCGCAACATGGGGATCATaGACTCCCCACAGATTCAGA +
Preference number: 2 (lower is better)
Translates to: SHFCLLSSYGGRNWSLRIATWGS*TPHRFR
Trigger: TCTGAATCTGTGGGGAGTGCATGATCCCCATGTTGC...GATACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTGAAGGAAAACTGAGATaGGGAAGATCTCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVIEGKLR*GRSQGR
Trigger: TCTGCCCTGAGATCTTCCCCATCTCAGTTTTCCTTC...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp AAAGTAGAGCAGAAAACTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTTGTTTAGAGTAAGGTTGTaGGGCAATGGGGAGAGGGGC +
Preference number: 2 (lower is better)
Translates to: KVEQKTSKGKDWIIDWSLFRVRL*GNGERG
Trigger: GCCCCTCTCCCCATTGCCCCACAACCTTACTCTAAA...CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAGTTTTCTGCTCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp TCAGCCATCTTCAGGGTGGTCATCCCTCTCCCAAGAATTCCACATGAATCCAGGCCTTCTCTCTTCTTATaGAGGAAGGAATTGGAGCTT +
Preference number: 2 (lower is better)
Translates to: SAIFRVVIPLPRIPHESRPSLFL*RKELEL
Trigger: AAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGG...CCTGGATTCATGTGGAATTCTTGGGAGAGGGATGACCACCCTGAAGATGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CAA 90 bp ACTAGTGGCAAAGCCACTGATAATTCCAAACCCAAGGGGACTCTTTaGAGTAGTTCACAGGCTGCTGCCAAGGAAAGTAGAGCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: TSGKATDNSKPKGTL*SSSQAAAKESRAEN
Trigger: GTTTTCTGCTCTACTTTCCTTGGCAGCAGCCTGTGAACTACTCAAAAGAGTCCCCTTGGGTTTGGAATTATCAGTGGCTTTGCCACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCGTGCCTGGCCCTAGGTaGTTAGAGCAGGCAGATAGT +
Preference number: 2 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVVPGPR*LEQADS
Trigger: ACTATCTGCCTGCTCTAATCACCTAGGGCCAGGCAC...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp GGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGGAAGTCTCCGTAAAGAAGTTTAATGCGCTCGTATaGGTCAAATGCTCGGGAAGT +
Preference number: 2 (lower is better)
Translates to: GTLMRSYESNAREVSVKKFNALV*VKCSGS
Trigger: ACTTCCCGAGCATTTGACTCATACGAGCGCATTAAA...CTTCTTTACGGAGACTTCCCGAGCATTTGACTCATACGAGCGCATTAAAGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446927.5
ENST00000458114.5
3UTR-3UTR CCA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTACGCCATTCCCTCTATaGCTACAGGGTCTAAAGTTC +
Preference number: 2 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRTPFPL*LQGLKF
Trigger: GAACTTTAGACCCTGTAGCCATAGAGGGAATGGCGT...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTAATTTCAGCAGGCTTTaGGGTAAAGAGGCCATCCCT +
Preference number: 2 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRNFSRL*GKEAIP
Trigger: AGGGATGGCCTCTTTACCCCAAAGCCTGCTGAAATT...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp CAAATACACATAGAGCTCAGCTTCCAGGGACTGGAGAAACAAGAAGGCCTCCAGACCCTGAGTAGTCACTaGTTGCAAACGTATCTTTAT +
Preference number: 2 (lower is better)
Translates to: QIHIELSFQGLEKQEGLQTLSSH*LQTYLY
Trigger: ATAAAGATACGTTTGCAATCAGTGACTACTCAGGGT...CTGGAGGCCTTCTTGTTTCTCCAGTCCCTGGAAGCTGAGCTCTATGTGTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCTTCCATTGGAAGGAATaGCTGAGGCAGGGTAGGCAG +
Preference number: 2 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVFHWKE*LRQGRQ
Trigger: CTGCCTACCCTGCCTCAGTCATTCCTTCCAATGGAA...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR GCA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTAGGTCATGTGTACTGCTaGCCTTCCCACCCGGAAGGT +
Preference number: 2 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVGHVYC*PSHPEG
Trigger: ACCTTCCGGGTGGGAAGGGCAGCAGTACACATGACC...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp AAAGTAGAGCAGAAAACTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTTGGAAGGAAAACTGAGATaGGGAAGATCTCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: KVEQKTSKGKDWIIDWSLEGKLR*GRSQGR
Trigger: TCTGCCCTGAGATCTTCCCCATCTCAGTTTTCCTTC...CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAGTTTTCTGCTCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTAAAAGCAGCTGTGACATaGCAGTGGTGGCAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVKAAVT*QWWQPG
Trigger: CCCTGGCTGCCACCACTGCCATGTCACAGCTGCTTT...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCGACTGGATCATTGACTaGAGCTTGAGGGGCTCAAGC +
Preference number: 2 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVDWIID*SLRGSS
Trigger: GCTTGAGCCCCTCAAGCTCCAGTCAATGATCCAGTC...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTACCCCCAGCATCTCAGTaGTCACTCCGTTCCAGTGAT +
Preference number: 2 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVPPASQ*SLRSSD
Trigger: ATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp CATTCTATACAAAGGGATCTCAGGCCACTAAGGTCAGACAGGTCTGAGGATTACAAACAAAGAAAAGGATaGGGTCATGTGTACTGCTGC +
Preference number: 2 (lower is better)
Translates to: HSIQRDLRPLRSDRSEDYKQRKG*GHVYCC
Trigger: GCAGCAGTACACATGACCCCATCCTTTTCTTTGTTT...GTAATCCTCAGACCTGTCTGACCTTAGTGGCCTGAGATCCCTTTGTATAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTACGTTTGGTAAGAGCTaGCAATGTCATCAAATACAC +
Preference number: 2 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRTFGKS*QCHQIH
Trigger: GTGTATTTGATGACATTGTCAGCTCTTACCAAACGT...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTACTCCATATTGCAACATaGGGATCATGCACTCCCCAC +
Preference number: 2 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVLHIAT*GSCTPH
Trigger: GTGGGGAGTGCATGATCCCCATGTTGCAATATGGAG...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CCA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTAAGACCCAGCAACCTTTaGCATCTCAGTGGTAACTCC +
Preference number: 2 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVRPSNL*HLSGNS
Trigger: GGAGTTACCACTGAGATGCCAAAGGTTGCTGGGTCT...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTATCATGGAAGGAAAACTaGGATGGGGAAGATCTCAGG +
Preference number: 2 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVSWKEN*DGEDLR
Trigger: CCTGAGATCTTCCCCATCTCAGTTTTCCTTCCATGA...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR TCA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCTTCTCATTTAATCCTTaGAGCAACCCTGAGGTAGGT +
Preference number: 2 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVFSFNP*SNPEVG
Trigger: ACCTACCTCAGGGTTGCTTCAAGGATTAAATGAGAA...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CCA 72 bp CTCCTGACATTCACAGGCATAAGCGCCCATGGCCCCTaGGGTCACCACCACCTCCAGTCCATCCCGCCGGGG +
Preference number: 3 (lower is better)
Translates to: LLTFTGISAHGP*GHHHLQSIPPG
Trigger: CCCCGGCGGGATGGACTGGAGGTGGTGGTGACCCCAGGGGCCATGGGCGCTTATGCCTGTGAATGTCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR GCA 72 bp CCTGCCCCAAGCTCAGGTCGAAGCACAGCAACATCCTaGAGGACACTGGAGGCCCGGCCATGCTCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: PAPSSGRSTATS*RTLEARPCSGP
Trigger: AGGGCCTGAGCATGGCCGGGCCTCCAGTGTCCTGCAGGATGTTGCTGTGCTTCGACCTGAGCTTGGGGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CAA 90 bp CCCCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAAAGCCACTGCCCCTCTaGGCCAGGGCCAGCGGCAAC +
Preference number: 3 (lower is better)
Translates to: PQPPPGLFLPARLQPESKKPLPL*ARASGN
Trigger: GTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTT...TTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR GCA 72 bp CCACTGTGTGGGCCCGGCTCGGAGCATCTCGCTGGCTaGCCCATACCAAGCTGTAAGCTGCTACCACATGGG +
Preference number: 3 (lower is better)
Translates to: PLCGPGSEHLAG*PIPSCKLLPHG
Trigger: CCCATGTGGTAGCAGCTTACAGCTTGGTATGGGGCAGCCAGCGAGATGCTCCGAGCCGGGCCCACACAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CAA 90 bp CCCTGTTCCAGGCAGGGCAAGTCCAGGGAGAGCTGCCACAGAGTGATGCCATCCACGCCCCCATTCCAATaGTCTCCCTCCCCATCCCTC +
Preference number: 3 (lower is better)
Translates to: PCSRQGKSRESCHRVMPSTPPFQ*SPSPSL
Trigger: GAGGGATGGGGAGGGAGACAATTGGAATGGGGGCGT...GGATGGCATCACTCTGTGGCAGCTCTCCCTGGACTTGCCCTGCCTGGAACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CCA 72 bp TCTATGTCTTGGACCAACCCTCGGTGCTCCCCGGCATaGGCCACACACTCATCCAGCCGGAAGCTCCAGGCA +
Preference number: 3 (lower is better)
Translates to: SMSWTNPRCSPA*ATHSSSRKLQA
Trigger: TGCCTGGAGCTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCAAGACATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 72 bp AGGGTGGTGAGAATCCACCAAAGCCACTGCCCCTCTTaGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAG +
Preference number: 3 (lower is better)
Translates to: RVVRIHQSHCPS*PGPAATAHLQE
Trigger: CTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGATTCTCACCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CAA 90 bp CTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGAGGGTCGACGGCCACAGTTGGTaGTATTCACTTGTGTCACCT +
Preference number: 3 (lower is better)
Translates to: LGQGQRQPLIFRRGGGRVDGHSW*YSLVSP
Trigger: AGGTGACACAAGTGAATACAACCAACTGTGGCCGTC...GACCCTCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 72 bp GGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTaGGAATCCACCAAAGCCACTGCCCCTCTTGGCCAG +
Preference number: 3 (lower is better)
Translates to: GWAWARIKQEGW*ESTKATAPLGQ
Trigger: CTGGCCAAGAGGGGCAGTGGCTTTGGTGGATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 72 bp CCATCAGCTGGAAACACTGGCCTGTCCATGAGTGGGTaGTCCCGGATGAAGGTGAGTACGCGGTCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: PSAGNTGLSMSG*SRMKVSTRSGR
Trigger: CCTGCCTGACCGCGTACTCACCTTCATCCGGGACCACCCACTCATGGACAGGCCAGTGTTTCCAGCTGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 72 bp GTGGCCATCAGCTGGAAACACTGGCCTGTCCATGAGTaGGTGGTCCCGGATGAAGGTGAGTACGCGGTCAGG +
Preference number: 3 (lower is better)
Translates to: VAISWKHWPVHE*VVPDEGEYAVR
Trigger: CCTGACCGCGTACTCACCTTCATCCGGGACCACCCACTCATGGACAGGCCAGTGTTTCCAGCTGATGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 72 bp AGTGACCAGCAGGGGGTGGCCATCAGCTGGAAACACTaGCCTGTCCATGAGTGGGTGGTCCCGGATGAAGGT +
Preference number: 3 (lower is better)
Translates to: SDQQGVAISWKH*PVHEWVVPDEG
Trigger: ACCTTCATCCGGGACCACCCACTCATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCCCTGCTGGTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR GCA 72 bp AATAAGCAGAACCACCCCAAGGACTCAGGGCACATTTaGCCCCAACCACCTCCAGGGCTCTTCCTTCCGGCC +
Preference number: 3 (lower is better)
Translates to: NKQNHPKDSGHI*PQPPPGLFLPA
Trigger: GGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGGGCAAATGTGCCCTGAGTCCTTGGGGTGGTTCTGCTTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
3UTR GCA 72 bp GCCCCATACCAAGCTGTAAGCTGCTACCACATGGGCTaGCCCACCCTCCTGACATTCACAGGCATAAGCGCC +
Preference number: 3 (lower is better)
Translates to: APYQAVSCYHMG*PTLLTFTGISA
Trigger: GGCGCTTATGCCTGTGAATGTCAGGAGGGTGGGGCAGCCCATGTGGTAGCAGCTTACAGCTTGGTATGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 72 bp TGTATCTGTAGTGACCAGCAGGGGGTGGCCATCAGCTaGAAACACTGGCCTGTCCATGAGTGGGTGGTCCCG +
Preference number: 3 (lower is better)
Translates to: CICSDQQGVAIS*KHWPVHEWVVP
Trigger: CGGGACCACCCACTCATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCCCTGCTGGTCACTACAGATACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CAA 90 bp AACGCTGAGCTGAGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCATCCTCTGTGGGGGAAGCCCTGATTaGCTGCAGAAAGCAGTTCTG +
Preference number: 3 (lower is better)
Translates to: NAELSSDPHCSVEVSILCGGSPD*LQKAVL
Trigger: CAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCC...ACAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR CAA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGACGCCCCCATTCCAATaGTCTCCCTCCCCATCCCTC +
Preference number: 3 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVTPPFQ*SPSPSL
Trigger: GAGGGATGGGGAGGGAGACAATTGGAATGGGGGCGT...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR TCA 72 bp CTCTGTCCCCAGGTAGAGCACATCATACTCTTTCCCTaGGAGGCTGGTCACCCTGTGGGCCACGACTCTGAG +
Preference number: 3 (lower is better)
Translates to: LCPQVEHIILFP*EAGHPVGHDSE
Trigger: CTCAGAGTCGTGGCCCACAGGGTGACCAGCCTCTCAGGGAAAGAGTATGATGTGCTCTACCTGGGGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 72 bp GTGGCTCTGGGAATAAGGCCAGATCTTCAAGAACGCTaGGCTGAGCTCCGATCCGCACTGCTCGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: VALGIRPDLQER*AELRSALLGGG
Trigger: ACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTTCTTGAAGATCTGGCCTTATTCCCAGAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR GCA 72 bp ATCTTCAAGAACGCTGAGCTGAGCTCCGATCCGCACTaGTCGGTGGAGGTGTCCATCCTCTGTCCCCAGGTA +
Preference number: 3 (lower is better)
Translates to: IFKNAELSSDPH*SVEVSILCPQV
Trigger: TACCTGGGGACAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTTCTTGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 72 bp TCACATGTGGCTAGAGGAGCCCCAGTTAGCCGAATGTaGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGT +
Preference number: 3 (lower is better)
Translates to: SHVARGAPVSRM*AGLGQGSSRKG
Trigger: ACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGGGGCTCCTCTAGCCACATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 72 bp CCAGTCCTCGGCACGACCCACTGCTCTGGTGATAATTaGCTCCGTCCCCAGGTAGTTTTTCACAGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: PVLGTTHCSGDN*LRPQVVFHSGS
Trigger: GCTGCCACTGTGAAAAACTACCTGGGGACGGAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAGGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458114.5
3UTR TCA 72 bp TCTGGGAATAAGGCCAGATCTTCAAGAACGCTGAGCTaGGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCA +
Preference number: 3 (lower is better)
Translates to: SGNKARSSRTLS*APIRTARWRCP
Trigger: TGGACACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTTCTTGAAGATCTGGCCTTATTCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 72 bp TCTGTCGCCGTCGCTGCTGACGCCGACCAATCAGAATaGGAGTCAGGGATGCTGCGAGAATCCCCAAGAAGA +
Preference number: 3 (lower is better)
Translates to: SVAVAADADQSE*ESGMLRESPRR
Trigger: TCTTCTTGGGGATTCTCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGCGTCAGCAGCGACGGCGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 72 bp TCTCTAGCCAGAAGTTCCCTCTGTCGCCGTCGCTGCTaGCGCCGACCAATCAGAATGAGAGTCAGGGATGCT +
Preference number: 3 (lower is better)
Translates to: SLARSSLCRRRC*RRPIRMRVRDA
Trigger: AGCATCCCTGACTCTCATTCTGATTGGTCGGCGTCAGCAGCGACGGCGACAGAGGGAACTTCTGGCTAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR GCA 72 bp CTGCTGACGCCGACCAATCAGAATGAGAGTCAGGGATaGTGCGAGAATCCCCAAGAAGAAGCCAGCCAGTCC +
Preference number: 3 (lower is better)
Translates to: LLTPTNQNESQG*CENPQEEASQS
Trigger: GGACTGGCTGGCTTCTTCTTGGGGATTCTCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGCGTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 72 bp CAGAGGGTGAGCAGCTCCCTCCTTCCACACCAAGCATaGGGACCCTTTCTCACAATCCTCTATGCCACAGCT +
Preference number: 3 (lower is better)
Translates to: QRVSSSLLPHQA*GPFLTILYATA
Trigger: AGCTGTGGCATAGAGGATTGTGAGAAAGGGTCCCCATGCTTGGTGTGGAAGGAGGGAGCTGCTCACCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CCA 72 bp ACTGGGTCCTGGGCCAGGATGCACTCTGAGCAGCTCTaGAGACGGCCACAGTTGGTTGTATTCACTTGTGTC +
Preference number: 3 (lower is better)
Translates to: TGSWARMHSEQL*RRPQLVVFTCV
Trigger: GACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGGACCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CAA 90 bp CACACACAGGATGCCCATGCTGAGCTTGGAGAACATGGCAAGACCACATGCGCACACTGTCCGAATGTCTaGTGGTCGGAAGGCACAGAC +
Preference number: 3 (lower is better)
Translates to: HTQDAHAELGEHGKTTCAHCPNV*WSEGTD
Trigger: GTCTGTGCCTTCCGACCACAAGACATTCGGACAGTG...TGCGCATGTGGTCTTGCCATGTTCTCCAAGCTCAGCATGGGCATCCTGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 72 bp GAGGCCATCCCTAGTTGTCTGGTGCCTGGCCCTAGGTaGTTAGAGCAGGCAGATAGTGGCCCAGAGTATAAG +
Preference number: 3 (lower is better)
Translates to: EAIPSCLVPGPR*LEQADSGPEYK
Trigger: CTTATACTCTGGGCCACTATCTGCCTGCTCTAATCACCTAGGGCCAGGCACCAGACAACTAGGGATGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR GCA 72 bp ACGCCATTCCCTCTATGGCTACAGGGTCTAAAGTTCTaGAGGCAACGCCCCCATTCCAATTGTCTCCCTCCC +
Preference number: 3 (lower is better)
Translates to: TPFPLWLQGLKF*RQRPHSNCLPP
Trigger: GGGAGGGAGACAATTGGAATGGGGGCGTTGCCTGCAGAACTTTAGACCCTGTAGCCATAGAGGGAATGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CCA 72 bp TTCATGTTGTTGGTGATGCACTCTCCAGGTCTGGGCTaGGGCACATCATTGTCCACGACAGGCAGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: FMLLVMHSPGLG*GTSLSTTGSPL
Trigger: CAGAGGACTGCCTGTCGTGGACAATGATGTGCCCCAGCCCAGACCTGGAGAGTGCATCACCAACAACATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 72 bp GGATGCACTCTGAGCAGCTCTGGAGACGGCCACAGTTaGTTGTATTCACTTGTGTCACCTCAGTACGGGAGC +
Preference number: 3 (lower is better)
Translates to: GCTLSSSGDGHS*LYSLVSPQYGS
Trigger: GCTCCCGTACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CAA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGGCAGAGACTCCATATaGCAACATGGGGATCATGCA +
Preference number: 3 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQGRDSI*QHGDHA
Trigger: TGCATGATCCCCATGTTGCAATATGGAGTCTCTGCC...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CAA 90 bp TGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAATCCACCAAAGTGGAGACGGCCACAGTaGGTTGTATTCACTTGTGTC +
Preference number: 3 (lower is better)
Translates to: WAGLGQGSSRKGGENPPKWRRPQ*VVFTCV
Trigger: GACACAAGTGAATACAACCAACTGTGGCCGTCTCCA...CTTTGGTGGATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR-3UTR CAA 90 bp AGATGGATGTTTCATCACATGTGGCTAGAGGAGCCCCAGTTAGCCGAATGTGGGGGTCTTGGCTGTAGCTaGTGGTCCCAGAAGGTGGAG +
Preference number: 3 (lower is better)
Translates to: RWMFHHMWLEEPQLAECGGLGCS*WSQKVE
Trigger: CTCCACCTTCTGGGACCACAAGCTACAGCCAAGACC...CCCACATTCGGCTAACTGGGGCTCCTCTAGCCACATGTGATGAAACATCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 72 bp CTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTTaGGGGGCTCAAGCACCAGGGATGAACGAGGCACAT +
Preference number: 3 (lower is better)
Translates to: LQRGRTGSLTGA*GAQAPGMNEAH
Trigger: ATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR TCA 72 bp GATGAAGGTGAGTACGCGGTCAGGCAGGGAGAGAGATaGGCCAAAGTGCCGGAGCTTCATGTTGTTGGTGAT +
Preference number: 3 (lower is better)
Translates to: DEGEYAVRQGER*AKVPELHVVGD
Trigger: ATCACCAACAACATGAAGCTCCGGCACTTTGGCTCATCTCTCTCCCTGCCTGACCGCGTACTCACCTTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR GCA 72 bp GCCCATGCTGAGCTTGGAGAACATGGCAAGACCACATaGGCAGCTGTAGCCACGGGAACTTCAAACACTACT +
Preference number: 3 (lower is better)
Translates to: AHAELGEHGKTT*AAVATGTSNTT
Trigger: AGTAGTGTTTGAAGTTCCCGTGGCTACAGCTGCGCATGTGGTCTTGCCATGTTCTCCAAGCTCAGCATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 72 bp TCTGAAGGGACCATTCAGCACTGTCCGAATGTCTTGTaGTCGGAAGGCACAGACAGCAGAGATAGTAGCCCC +
Preference number: 3 (lower is better)
Translates to: SEGTIQHCPNVL*SEGTDSRDSSP
Trigger: GGGGCTACTATCTCTGCTGTCTGTGCCTTCCGACCACAAGACATTCGGACAGTGCTGAATGGTCCCTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR TCA 72 bp GCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTATaGCTGCCGCTGAGAAGCTCCTCATCCAAGCCCATA +
Preference number: 3 (lower is better)
Translates to: APSKGQKILWFL*LPLRSSSSKPI
Trigger: TATGGGCTTGGATGAGGAGCTTCTCAGCGGCAGTCATAAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR TCA 72 bp CACACGGGCCACCCGTGGGACTTTAATGCGCTCGTATaGGTCAAATGCTCGGGAAGTCTCCGTAAAGAAGAA +
Preference number: 3 (lower is better)
Translates to: HTGHPWDFNALV*VKCSGSLRKEE
Trigger: TTCTTCTTTACGGAGACTTCCCGAGCATTTGACTCATACGAGCGCATTAAAGTCCCACGGGTGGCCCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446927.5
ENST00000458114.5
3UTR CCA 72 bp CTCCCAAGAATTCCACATGAATCCAGGGGGCTCATGTaGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCT +
Preference number: 3 (lower is better)
Translates to: LPRIPHESRGLM*LPAKGRKSSGS
Trigger: AGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATTCATGTGGAATTCTTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CCA 72 bp CATTTGCCCAGCTCTAGATGGATGTTTCATCACATGTaGCTAGAGGAGCCCCAGTTAGCCGAATGTGGGCTG +
Preference number: 3 (lower is better)
Translates to: HLPSSRWMFHHM*LEEPQLAECGL
Trigger: CAGCCCACATTCGGCTAACTGGGGCTCCTCTAGCCACATGTGATGAAACATCCATCTAGAGCTGGGCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR CAA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCACCCAAGGGGACTCTTTaGAGTAGTTCACAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPPKGTL*SSSQAA
Trigger: AGCAGCCTGTGAACTACTCAAAAGAGTCCCCTTGGG...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CAA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTGAAGCCCAGTCCCCTTaGACATCTCCCCACCTTCCT +
Preference number: 3 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVIEAQSP*TSPHLP
Trigger: AGGAAGGTGGGGAGATGTCAAAGGGGACTGGGCTTC...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CAA 90 bp TCAGCCATCTTCAGGGTGGTCATCCCTCTCCCAAGAATTCCACATGAATCCAGGGCACGTCCTCGTGTTTaGGGCTGGCATAAAGTTCAG +
Preference number: 3 (lower is better)
Translates to: SAIFRVVIPLPRIPHESRARPRV*GWHKVQ
Trigger: CTGAACTTTATGCCAGCCCAAAACACGAGGACGTGC...CCTGGATTCATGTGGAATTCTTGGGAGAGGGATGACCACCCTGAAGATGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR TCA 72 bp AACACACATTCCATCCCAGCAGAGGTCTGTCACATCTaGGGAAGTGGCATGGAAGCAGGGCATAGGTCTACA +
Preference number: 3 (lower is better)
Translates to: NTHSIPAEVCHI*GSGMEAGHRST
Trigger: TGTAGACCTATGCCCTGCTTCCATGCCACTTCCTCAGATGTGACAGACCTCTGCTGGGATGGAATGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR GCA 72 bp GGGATGCAGAGGGAGCAGGGAAAACGTGGGCAAGAGTaGTTATTGTGGTTTCCATTGGAAGGAATGACTGAG +
Preference number: 3 (lower is better)
Translates to: GMQREQGKRGQE*LLWFPLEGMTE
Trigger: CTCAGTCATTCCTTCCAATGGAAACCACAATAAGCACTCTTGCCCACGTTTTCCCTGCTCCCTCTGCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CAA 90 bp CATTCTATACAAAGGGATCTCAGGCCACTAAGGTCAGACAGGTCTGAGGATTACTGCAGTGGCGTGATCTaGGCTCACTGCAAACTCCAC +
Preference number: 3 (lower is better)
Translates to: HSIQRDLRPLRSDRSEDYCSGVI*AHCKLH
Trigger: GTGGAGTTTGCAGTGAGCCAAGATCACGCCACTGCA...GTAATCCTCAGACCTGTCTGACCTTAGTGGCCTGAGATCCCTTTGTATAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CAA 90 bp TCTGGAGACGGCCACAGTTGGTTGTATTCACTTGTGTCACCTCAGTACGGGAGCACAGGCAGTCCTCTGTaGCAGTCATGTTTTAGTTCT +
Preference number: 3 (lower is better)
Translates to: SGDGHSWLYSLVSPQYGSTGSPL*QSCFSS
Trigger: AGAACTAAAACATGACTGCAACAGAGGACTGCCTGT...GCTCCCGTACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 72 bp TCCCAGCAGAGGTCTGTCACATCTGAGGAAGTGGCATaGAAGCAGGGCATAGGTCTACATCACTCAAAAGAA +
Preference number: 3 (lower is better)
Translates to: SQQRSVTSEEVA*KQGIGLHHSKE
Trigger: TTCTTTTGAGTGATGTAGACCTATGCCCTGCTTCCATGCCACTTCCTCAGATGTGACAGACCTCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR TCA 72 bp CAGGCAGTCCTCTGTTGCAGTCATGTTTTAGTTCTCTaGAGGGACCATTCAGCACTGTCCGAATGTCTTGTG +
Preference number: 3 (lower is better)
Translates to: QAVLCCSHVLVL*RDHSALSECLV
Trigger: CACAAGACATTCGGACAGTGCTGAATGGTCCCTTCAGAGAACTAAAACATGACTGCAACAGAGGACTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CCA 72 bp CACTTATACACTAGTGGTCATTTGCCCAGCTCTAGATaGATGTTTCATCACATGTGGCTAGAGGAGCCCCAG +
Preference number: 3 (lower is better)
Translates to: HLYTSGHLPSSR*MFHHMWLEEPQ
Trigger: CTGGGGCTCCTCTAGCCACATGTGATGAAACATCCATCTAGAGCTGGGCAAATGACCACTAGTGTATAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR-3UTR CAA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTAAATTTAGAGTAAGGTaGTGGGGCAATGGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRKFRVR*WGNGER
Trigger: CCTCTCCCCATTGCCCCACAACCTTACTCTAAATTT...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR TCA 72 bp AGAGCCATGTGCGAGTGGTCAAGCAGGAAGAGGTCTTaGCGTTTGGTAAGAGCTGACAATGTCATCAAATAC +
Preference number: 3 (lower is better)
Translates to: RAMCEWSSRKRS*RLVRADNVIKY
Trigger: GTATTTGATGACATTGTCAGCTCTTACCAAACGTCAAGACCTCTTCCTGCTTGACCACTCGCACATGGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR TCA 72 bp AAGCCACTGATAATTCCAAACCCAAGGGGACTCTTTTaGGTAGTTCACAGGCTGCTGCCAAGGAAAGTAGAG +
Preference number: 3 (lower is better)
Translates to: KPLIIPNPRGLF*VVHRLLPRKVE
Trigger: CTCTACTTTCCTTGGCAGCAGCCTGTGAACTACTCAAAAGAGTCCCCTTGGGTTTGGAATTATCAGTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR GCA 72 bp TCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTaGCCAGCTCTAGATGGATGTTTCATCACATGTGGC +
Preference number: 3 (lower is better)
Translates to: SVPVITYTLVVI*PALDGCFITCG
Trigger: GCCACATGTGATGAAACATCCATCTAGAGCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446927.5
3UTR TCA 72 bp GTCAAGCAGGAAGAGGTCTTGACGTTTGGTAAGAGCTaGCAATGTCATCAAATACACATAGAGCTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: VKQEEVLTFGKS*QCHQIHIELSF
Trigger: GAAGCTGAGCTCTATGTGTATTTGATGACATTGTCAGCTCTTACCAAACGTCAAGACCTCTTCCTGCTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR TCA 72 bp GCCCAGTCATTCATGCACATGTGGCCAGGTCTCTTATaGACACTATGTATTTACACGTACTCTTTCATGGAA +
Preference number: 3 (lower is better)
Translates to: AQSFMHMWPGLL*TLCIYTYSFME
Trigger: TTCCATGAAAGAGTACGTGTAAATACATAGTGTTCATAAGAGACCTGGCCACATGTGCATGAATGACTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR GCA 72 bp CTCATAAATATTCCTAAGCATCGGCCCAGTCATTCATaGACATGTGGCCAGGTCTCTTATGAACACTATGTA +
Preference number: 3 (lower is better)
Translates to: LINIPKHRPSHS*TCGQVSYEHYV
Trigger: TACATAGTGTTCATAAGAGACCTGGCCACATGTGCATGAATGACTGGGCCGATGCTTAGGAATATTTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR TCA 72 bp TATGTATTTACACGTACTCTTTCATGGAAGGAAAACTaGGATGGGGAAGATCTCAGGGCAGAGACTCCATAT +
Preference number: 3 (lower is better)
Translates to: YVFTRTLSWKEN*DGEDLRAETPY
Trigger: ATATGGAGTCTCTGCCCTGAGATCTTCCCCATCTCAGTTTTCCTTCCATGAAAGAGTACGTGTAAATACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR TCA 72 bp GAACAGGATATCTGTGAAACAATGACTGTCCTTTACTaGGTGAGGCTTAATATGATTGCGAGTGTCATGGTT +
Preference number: 3 (lower is better)
Translates to: EQDICETMTVLY*VRLNMIASVMV
Trigger: AACCATGACACTCGCAATCATATTAAGCCTCACTCAGTAAAGGACAGTCATTGTTTCACAGATATCCTGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR-3UTR CAA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTATTATTGTGGTTTCCATaGGAAGGAATGACTGAGGCA +
Preference number: 3 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVLLWFP*EGMTEA
Trigger: TGCCTCAGTCATTCCTTCCAATGGAAACCACAATAA...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CCAGCCAGTCCCGCCCCCACTGTGTGGGCCCGGCTCGGAGCATCTCGCTGGCTGGTCGTCCATCTCTGCTaGAGGGTCTTCCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PASPAPTVWARLGASRWLVVHLC*RVFRPP
Trigger: CGGGGGCCGGAAGACCCTCCAGCAGAGATGGACGAC...CAGCCAGCGAGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGGACTGGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp GAAGCCAGCCAGTCCCGCCCCCACTGTGTGGGCCCGGCTCGGAGCATCTCGCTGCGGTGCTCCCCGGCATaGGCCACACACTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: EASQSRPHCVGPARSISLRCSPA*ATHSSS
Trigger: GCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCG...CAGCGAGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGGACTGGCTGGCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp CCAGCCAGTCCCGCCCCCACTGTGTGGGCCCGGCTCGGAGCATCTCGCTGGCTGAACGTCGTCCATCTCTaGTGGAGGGTCTTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PASPAPTVWARLGASRWLNVVHL*WRVFRP
Trigger: GGGCCGGAAGACCCTCCAGCAGAGATGGACGACGTT...CAGCCAGCGAGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGGACTGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CCAGCCAGTCCCGCCCCCACTGTGTGGGCCCGGCTCGGAGCATCTCGCTGGCTGTGGCCTGTCCATGAGTaGGTGGTCCCGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: PASPAPTVWARLGASRWLWPVHE*VVPDEG
Trigger: ACCTTCATCCGGGACCACCCACTCATGGACAGGCCA...CAGCCAGCGAGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGGACTGGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp TGGACCAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGGGCCAGGATGCACTCTaGGCAGCTCTGGAGACGGCC +
Preference number: 4 (lower is better)
Translates to: WTNPRCSPAWATHSSSRKGQDAL*AALETA
Trigger: GGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCC...CTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp CCAGCCAGTCCCGCCCCCACTGTGTGGGCCCGGCTCGGAGCATCTCGCTGGCTGCTCGGCACGACCCACTaGTCTGGTGATAATTGGCTC +
Preference number: 4 (lower is better)
Translates to: PASPAPTVWARLGASRWLLGTTH*SGDNWL
Trigger: GAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAG...CAGCCAGCGAGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGGACTGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp GAATCCACCAAAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCATCTTTGGCTCCGCCTaGCCGCGGGTGCGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: ESTKATAPLGQGQRQPLIIFGSA*PRVRRK
Trigger: CTTGCGCCGCACCCGCGGCCAGGCGGAGCCAAAGAT...GATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420077.5
CDS-3UTR CCA 90 bp TTCGGCTGGGCTCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCAGGATTGGAAGCGAGGTTCTaGGCACCGAGCGGGGGACGC +
Preference number: 4 (lower is better)
Translates to: FGWAQGHGCDKGWGVQPGLEARF*APSGGR
Trigger: GCGTCCCCCGCTCGGTGCCCAGAACCTCGCTTCCAA...TCCTGGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGCCCAGCCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446927.5
ENST00000458114.5
CDS-3UTR CCA 90 bp TGGACCAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGCGGTGCTCCCCGGCATaGGCCACACACTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: WTNPRCSPAWATHSSSRKRCSPA*ATHSSS
Trigger: GCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCG...CTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp ATAAGCGCCCATGGCCCCTGGGGTCACCACCACCTCCAGTCCATCCCGCCGGGGAGGCAGGGAGAGAGATaGGCCAAAGTGCCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: ISAHGPWGHHHLQSIPPGRQGER*AKVPEL
Trigger: AAGCTCCGGCACTTTGGCTCATCTCTCTCCCTGCCT...CCCCGGCGGGATGGACTGGAGGTGGTGGTGACCCCAGGGGCCATGGGCGCTTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CCCATTCGGCTGGGCTCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCGCACAGACTGGGTCCTaGGCCAGGATGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: PIRLGSRPRLRQRLGRSAAQTGS*ARMHSE
Trigger: CTCAGAGTGCATCCTGGCCCAGGACCCAGTCTGTGC...GGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGCCCAGCCGAATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp TGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGAGGGTCTTGCTCCAGGCACAGACTaGGTCCTGGGCCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: WPGPAATAHLQERGREGLAPGTD*VLGQDA
Trigger: TGCATCCTGGCCCAGGACCCAGTCTGTGCCTGGAGC...AAGACCCTCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp ACTGGGTCCTGGGCCAGGATGCACTCTGAGCAGCTCTGGAGACGGCCACAGTTGAGCGCCCATGGCCCCTaGGGTCACCACCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: TGSWARMHSEQLWRRPQLSAHGP*GHHHLQ
Trigger: CTGGAGGTGGTGGTGACCCCAGGGGCCATGGGCGCT...CAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGGACCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp TGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGAGGGTCTTAGGCATAAGCGCCCATaGCCCCTGGGGTCACCACCA +
Preference number: 4 (lower is better)
Translates to: WPGPAATAHLQERGREGLRHKRP*PLGSPP
Trigger: TGGTGGTGACCCCAGGGGCCATGGGCGCTTATGCCT...AAGACCCTCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp TCGGCTGGGCTCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCAGGAAAGGCATAAGCGCCCATaGCCCCTGGGGTCACCACCA +
Preference number: 4 (lower is better)
Translates to: SAGLKATAATKAGAFSQERHKRP*PLGSPP
Trigger: TGGTGGTGACCCCAGGGGCCATGGGCGCTTATGCCT...TTCCTGGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGCCCAGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp CCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGACTCGGAGCATCTCGCTaGCTGCCCCATACCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PLLARASGNRSSSGEGEGLGASR*LPHTKL
Trigger: CAGCTTGGTATGGGGCAGCCAGCGAGATGCTCCGAG...TCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp AGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCAGGCAGGGAGAGAGATGAGCCCGCCCCCACTGTGTaGGCCCGGCTCGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: SGWSRMKVSTRSGRERDEPAPTV*ARLGAS
Trigger: AGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGG...CTCATCTCTCTCCCTGCCTGACCGCGTACTCACCTTCATCCGGGACCACCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CAA 72 bp GTCCCAGAAGGTGGAGCCCCCAGGTCCAGGCCCACCTaGTCTCTAGCCAGAAGTTCCCTCTGTCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: VPEGGAPRSRPT*SLARSSLCRRR
Trigger: GCGACGGCGACAGAGGGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCTGGGGGCTCCACCTTCTGGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp GAAGCCAGCCAGTCCCGCCCCCACTGTGTGGGCCCGGCTCGGAGCATCTCGCTGCTACAGTTCTGTCTGTaGGCCTCAGGAACCATCCAG +
Preference number: 4 (lower is better)
Translates to: EASQSRPHCVGPARSISLLQFCL*ASGTIQ
Trigger: CTGGATGGTTCCTGAGGCTCACAGACAGAACTGTAG...CAGCGAGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGGACTGGCTGGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp GATGCTGCGAGAATCCCCAAGAAGAAGCCAGCCAGTCCCGCCCCCACTGTGTGGGGCCAGGATGCACTCTaGGCAGCTCTGGAGACGGCC +
Preference number: 4 (lower is better)
Translates to: DAARIPKKKPASPAPTVWGQDAL*AALETA
Trigger: GGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCC...CCACACAGTGGGGGCGGGACTGGCTGGCTTCTTCTTGGGGATTCTCGCAGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp TCTATGTCTTGGACCAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCGCAAGCTACGGCCTCTaGTCAGGGCCCCGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: SMSWTNPRCSPAWATHSSASYGL*SGPRGY
Trigger: GTAGCCCCGGGGCCCTGAGCAGAGGCCGTAGCTTGC...GGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCAAGACATAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420077.5
CDS-3UTR GCA 90 bp CCAGTCCTCGGCACGACCCACTGCTCTGGTGATAATTGGCTCCGTCCCCAGGTAGCAAGCTACGGCCTCTaGTCAGGGCCCCGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: PVLGTTHCSGDNWLRPQVASYGL*SGPRGY
Trigger: GTAGCCCCGGGGCCCTGAGCAGAGGCCGTAGCTTGC...TACCTGGGGACGGAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000458114.5
CDS-3UTR GCA 90 bp CCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGACCATCCAGTCAATCCTaGGGGGTCTCTCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PLLARASGNRSSSGEGEGPSSQS*GVSPLR
Trigger: TCTCAGGGGAGAGACCCCGCAGGATTGACTGGATGG...TCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp CAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGCTCCAAGCTCCGATCCGCACTaGTCGGTGGAGGTGTCCATC +
Preference number: 4 (lower is better)
Translates to: QPSVLPGMGHTLIQPEAPSSDPH*SVEVSI
Trigger: GATGGACACCTCCACCGAGCAGTGCGGATCGGAGCT...TGGAGCTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp AGGGAGGGTCTTGGCTGTAGCTTGTGGTCCCAGAAGGTGGAGCCCCCAGGTCCATGGACCAACCCTCGGTaGTCCCCGGCATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: REGLGCSLWSQKVEPPGPWTNPR*SPAWAT
Trigger: TGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCA...TGGACCTGGGGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAGACCCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp TCTATGTCTTGGACCAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGAGGCCGGCATCTTTaGCTCCGCCTGGCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: SMSWTNPRCSPAWATHSSRGRHL*LRLAAG
Trigger: ACCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCT...GGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCAAGACATAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420077.5
CDS-3UTR CCA 90 bp AGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCATCCTCTGTCCCCAGGTAGAGTTGGAAGCGAGGTTCTaGGCACCGAGCGGGGGACGC +
Preference number: 4 (lower is better)
Translates to: SSDPHCSVEVSILCPQVELEARF*APSGGR
Trigger: GCGTCCCCCGCTCGGTGCCCAGAACCTCGCTTCCAA...CTCTACCTGGGGACAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGCTCCACTCGGAGCATCTCGCTaGCTGCCCCATACCAAGCTG +
Preference number: 4 (lower is better)
Translates to: QPSVLPGMGHTLIQPEAPLGASR*LPHTKL
Trigger: CAGCTTGGTATGGGGCAGCCAGCGAGATGCTCCGAG...TGGAGCTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp GGACTGGAGAAACAAGAAGGCCTCCAGCAGCTACCAGTCCAGGGACTGGCCACACCCGCCCCCACTGTGTaGGCCCGGCTCGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: GLEKQEGLQQLPVQGLATPAPTV*ARLGAS
Trigger: AGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGG...TGTGGCCAGTCCCTGGACTGGTAGCTGCTGGAGGCCTTCTTGTTTCTCCAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GATGCTGCGAGAATCCCCAAGAAGAAGCCAGCCAGTCCCGCCCCCACTGTGTGGGGACTGCGAACCGGGTaGGACAGGAGTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: DAARIPKKKPASPAPTVWGLRTG*DRSQPQ
Trigger: CTGAGGCTGACTCCTGTCTCACCCGGTTCGCAGTCC...CCACACAGTGGGGGCGGGACTGGCTGGCTTCTTCTTGGGGATTCTCGCAGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp GAAGGTGGAGCCCCCAGGTCCAGGCCCACCTTGTCTCTAGCCAGAAGTTCCCTCGGACTGCGAACCGGGTaGGACAGGAGTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: EGGAPRSRPTLSLARSSLGLRTG*DRSQPQ
Trigger: CTGAGGCTGACTCCTGTCTCACCCGGTTCGCAGTCC...GAGGGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCTGGGGGCTCCACCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp TGGACCAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGTCAAGAACGCTGAGCTaGGCTCCGATCCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: WTNPRCSPAWATHSSSRKSRTLS*APIRTA
Trigger: AGCAGTGCGGATCGGAGCTCAGCTCAGCGTTCTTGA...CTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp ACCATCCAGTCAATCCTGCGGGGTCTCTCCCCTGAGAAGGGCAGGGATAAAGCGGCAAGCTACGGCCTCTaGTCAGGGCCCCGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: TIQSILRGLSPEKGRDKAASYGL*SGPRGY
Trigger: GTAGCCCCGGGGCCCTGAGCAGAGGCCGTAGCTTGC...CGCTTTATCCCTGCCCTTCTCAGGGGAGAGACCCCGCAGGATTGACTGGATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000416236.5
CDS-3UTR GCA 90 bp GGGGGTGAGTGCAGTCACTCCACTGGGCTGGTGCCACACACAGGATGCCCATGCAACGTCGTCCATCTCTaGTGGAGGGTCTTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GGECSHSTGLVPHTGCPCNVVHL*WRVFRP
Trigger: GGGCCGGAAGACCCTCCAGCAGAGATGGACGACGTT...GCATGGGCATCCTGTGTGTGGCACCAGCCCAGTGGAGTGACTGCACTCACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp AGCGAAGATGGTGTCCCGGGCGCCAACATAAAGTGTGTGGGAGGCAGGATCCACATCTTTGGCTCCGCCTaGCCGCGGGTGCGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: SEDGVPGANIKCVGGRIHIFGSA*PRVRRK
Trigger: CTTGCGCCGCACCCGCGGCCAGGCGGAGCCAAAGAT...GTGGATCCTGCCTCCCACACACTTTATGTTGGCGCCCGGGACACCATCTTCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416236.5
CDS-3UTR CCA 90 bp CCCCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAATTGGAAGCGAGGTTCTaGGCACCGAGCGGGGGACGC +
Preference number: 4 (lower is better)
Translates to: PQPPPGLFLPARLQPESKLEARF*APSGGR
Trigger: GCGTCCCCCGCTCGGTGCCCAGAACCTCGCTTCCAA...TTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp TGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGAGGGTCTTTGGCCTGTCCATGAGTaGGTGGTCCCGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: WPGPAATAHLQERGREGLWPVHE*VVPDEG
Trigger: ACCTTCATCCGGGACCACCCACTCATGGACAGGCCA...AAGACCCTCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp TCGGCTGGGCTCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCAGGAAGGGGTGGCCATCAGCTaGAAACACTGGCCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SAGLKATAATKAGAFSQEGVAIS*KHWPVH
Trigger: ATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCC...TTCCTGGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGCCCAGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp TTCGGCTGGGCTCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCAGGAATCCGCACTGCTCGGTaGAGGTGTCCATCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: FGWAQGHGCDKGWGVQPGIRTAR*RCPSSV
Trigger: GACAGAGGATGGACACCTCCACCGAGCAGTGCGGAT...TCCTGGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGCCCAGCCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp AAACACTGGCCTGTCCATGAGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCAGCCACTGCCCCTCTTaGCCAGGGCCAGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: KHWPVHEWVVPDEGEYAVSHCPS*PGPAAT
Trigger: GGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCT...GACCGCGTACTCACCTTCATCCGGGACCACCCACTCATGGACAGGCCAGTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp TCGGCTGGGCTCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCAGGAAACTCAGAGGCTGGGATaGTCTTCCAGGCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SAGLKATAATKAGAFSQETQRLG*SSRPSD
Trigger: GTCACTGGGCCTGGAAGACCATCCCAGCCTCTGAGT...TTCCTGGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGCCCAGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR TCA 90 bp CCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGCTCCAGGCACTACAGTTCTGTCTGTaGGCCTCAGGAACCATCCAG +
Preference number: 4 (lower is better)
Translates to: PRCSPAWATHSSSRKLQALQFCL*ASGTIQ
Trigger: CTGGATGGTTCCTGAGGCTCACAGACAGAACTGTAG...TGCCTGGAGCTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp CCCATTCGGCTGGGCTCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCATCATACTCTTTCCCTaGGAGGCTGGTCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: PIRLGSRPRLRQRLGRSAIILFP*EAGHPV
Trigger: CACAGGGTGACCAGCCTCTCAGGGAAAGAGTATGAT...GGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGCCCAGCCGAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR TCA 90 bp CCCTGTTCCAGGCAGGGCAAGTCCAGGGAGAGCTGCCACAGAGTGATGCCATCCTGTCGCCGTCGCTGCTaGCGCCGACCAATCAGAATG +
Preference number: 4 (lower is better)
Translates to: PCSRQGKSRESCHRVMPSCRRRC*RRPIRM
Trigger: CATTCTGATTGGTCGGCGTCAGCAGCGACGGCGACA...GGATGGCATCACTCTGTGGCAGCTCTCCCTGGACTTGCCCTGCCTGGAACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGAGGGTCATAGGGGGCCAGGGATaGAGGTTTACAGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LGQGQRQPLIFRRGGGRVIGGQG*RFTGVQ
Trigger: CTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTAT...GACCCTCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR GCA 90 bp TGGACCAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGGTATGTGTGAGGGACTaGGAACCGGGTGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: WTNPRCSPAWATHSSSRKVCVRD*EPGETG
Trigger: TCCTGTCTCACCCGGTTCGCAGTCCCTCACACATAC...CTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp ACTGGGTCCTGGGCCAGGATGCACTCTGAGCAGCTCTGGAGACGGCCACAGTTGATCCACCAAAGCCACTaGCCCTCTTGGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TGSWARMHSEQLWRRPQLIHQSH*PSWPGP
Trigger: TGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGAT...CAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGGACCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp TCATCCAAGCCCATACAGAGGGTGAGCAGCTCCCTCCTTCCACACCAAGCATGGATCTTTGGCTCCGCCTaGCCGCGGGTGCGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: SSKPIQRVSSSLLPHQAWIFGSA*PRVRRK
Trigger: CTTGCGCCGCACCCGCGGCCAGGCGGAGCCAAAGAT...CCATGCTTGGTGTGGAAGGAGGGAGCTGCTCACCCTCTGTATGGGCTTGGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CGGGCCACCCGTGGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGGAAGTCATCTTTGGCTCCGCCTaGCCGCGGGTGCGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: RATRGTLMRSYESNAREVIFGSA*PRVRRK
Trigger: CTTGCGCCGCACCCGCGGCCAGGCGGAGCCAAAGAT...GACTTCCCGAGCATTTGACTCATACGAGCGCATTAAAGTCCCACGGGTGGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458114.5
CDS-3UTR CCA 90 bp CCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGCGAGTGGTCAAGCAGGAAGAAGAGGCCGGCATCTTTaGCTCCGCCTGGCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: PGLSRRSLEPCASGQAGRRGRHL*LRLAAG
Trigger: ACCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCT...TCTTCCTGCTTGACCACTCGCACATGGCTCTAGGCTTCTCCTGCTGAGTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp ACAAAGGCTGGGGCGTTCAGCCAGGAAGGCAAGGTATCTGTCCGAATCCAGTCCAGAGGCCGGCATCTTTaGCTCCGCCTGGCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: TKAGAFSQEGKVSVRIQSRGRHL*LRLAAG
Trigger: ACCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCT...GGACTGGATTCGGACAGATACCTTGCCTTCCTGGCTGAACGCCCCAGCCTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458114.5
CDS-3UTR CCA 90 bp TGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGAGGGTCTTGTCAGCCTCAGAGATTaGAAGCGAGGTTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: WPGPAATAHLQERGREGLVSLRD*KRGSGH
Trigger: GTGCCCAGAACCTCGCTTCCAATCTCTGAGGCTGAC...AAGACCCTCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp TGGACCAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGCTGTCCATGAGTGGGTaGTCCCGGATGAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: WTNPRCSPAWATHSSSRKLSMSG*SRMKVS
Trigger: ACTCACCTTCATCCGGGACCACCCACTCATGGACAG...CTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CTTGGACCAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGACACTCTGAGCAGCTCTaGAGACGGCCACAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: LGPTLGAPRHGPHTHPAGHSEQL*RRPQLV
Trigger: AACCAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTG...TCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CACACACGGGCCACCCGTGGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGAGCCACTGCCCCTCTTaGCCAGGGCCAGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: HTRATRGTLMRSYESNARSHCPS*PGPAAT
Trigger: GGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCT...CCGAGCATTTGACTCATACGAGCGCATTAAAGTCCCACGGGTGGCCCGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp AGGGGGTGGCCATCAGCTGGAAACACTGGCCTGTCCATGAGTGGGTGGTCCCGGAATCAGGCAAAGGTCTaGCCCCAAGCCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: RGWPSAGNTGLSMSGWSRNQAKV*PQAHPG
Trigger: GCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT...CCGGGACCACCCACTCATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR TCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGGGACTGCGAACCGGGTaGGACAGGAGTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: APGMNEAHSQAKTRTQQEGLRTG*DRSQPQ
Trigger: CTGAGGCTGACTCCTGTCTCACCCGGTTCGCAGTCC...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp AAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGCGAGTGGTCAAGCAGGGGCCAGGATGCACTCTaGGCAGCTCTGGAGACGGCC +
Preference number: 4 (lower is better)
Translates to: KTRTQQEKPRAMCEWSSRGQDAL*AALETA
Trigger: GGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCC...CCTGCTTGACCACTCGCACATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp TTCGGCTGGGCTCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCAGGAACAGGATGCCCATGCTaGGCTTGGAGAACATGGCAA +
Preference number: 4 (lower is better)
Translates to: FGWAQGHGCDKGWGVQPGTGCPC*AWRTWQ
Trigger: TTGCCATGTTCTCCAAGCTCAGCATGGGCATCCTGT...TCCTGGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGCCCAGCCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR GCA 90 bp AGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCAGGCAGGGAGAGAGATGAGAGCACAGCAACATCCTaGAGGACACTGGAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SGWSRMKVSTRSGRERDESTATS*RTLEAR
Trigger: CCGGGCCTCCAGTGTCCTGCAGGATGTTGCTGTGCT...CTCATCTCTCTCCCTGCCTGACCGCGTACTCACCTTCATCCGGGACCACCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp AACGCTGAGCTGAGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCATCCTCTGTGGTCCTGGGCCAGGATaGACTCTGAGCAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: NAELSSDPHCSVEVSILCGPGPG*TLSSSG
Trigger: TCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGGACC...ACAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp GAATCCACCAAAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTACCAAGCTGTAAGCTaGTACCACATGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ESTKATAPLGQGQRQPLIYQAVS*YHMGCP
Trigger: GGGGCAGCCCATGTGGTAGCAGCTTACAGCTTGGTA...GATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp AGGGGGTGGCCATCAGCTGGAAACACTGGCCTGTCCATGAGTGGGTGGTCCCGGGAGCATCTCGCTGGCTaGCCCATACCAAGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: RGWPSAGNTGLSMSGWSREHLAG*PIPSCK
Trigger: CTTACAGCTTGGTATGGGGCAGCCAGCGAGATGCTC...CCGGGACCACCCACTCATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp CCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGTGCTCAAGGCCACGGCTaGGACAAAGGCTGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: PTTSRALPSGQAPTRKQSAQGHG*DKGWGV
Trigger: AACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGC...ACTTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp TCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCAGGAAGGCAAGGTATGACTCAGGGCACATTTaGCCCCAACCACCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SRPRLRQRLGRSARKARYDSGHI*PQPPPG
Trigger: CCCTGGAGGTGGTTGGGGGCAAATGTGCCCTGAGTC...ATACCTTGCCTTCCTGGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR GCA 90 bp CCCCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGACTCAGGGCACATTTaGCCCCAACCACCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PQPPPGLFLPARLQPESKDSGHI*PQPPPG
Trigger: CCCTGGAGGTGGTTGGGGGCAAATGTGCCCTGAGTC...TTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp ATTGTATGTGTGAGGGACTGCGAACCGGGTGAGACAGGAGTCAGCCTCTCAGCAAGAGGCCGGCATCTTTaGCTCCGCCTGGCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: IVCVRDCEPGETGVSLSARGRHL*LRLAAG
Trigger: ACCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCT...TGCTGAGAGGCTGACTCCTGTCTCACCCGGTTCGCAGTCCCTCACACATACAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416236.5
CDS-3UTR CCA 90 bp AGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCATCCTCTGTCCCCAGGTAGAGGCCATGCTCAGGCCCTaGACAGAGCAGGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SSDPHCSVEVSILCPQVEAMLRP*TEQVSF
Trigger: AAAGCTGACCTGCTCTGTCCAGGGCCTGAGCATGGC...CTCTACCTGGGGACAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CCACCAAAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCATGCACTCTCCAGGTCTaGGCTGGGGCACATCATTGT +
Preference number: 4 (lower is better)
Translates to: PPKPLPLLARASGNRSSSCTLQV*AGAHHC
Trigger: ACAATGATGTGCCCCAGCCCAGACCTGGAGAGTGCA...TGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CCAGTCCTCGGCACGACCCACTGCTCTGGTGATAATTGGCTCCGTCCCCAGGTAGCACAGACTGGGTCCTaGGCCAGGATGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: PVLGTTHCSGDNWLRPQVAQTGS*ARMHSE
Trigger: CTCAGAGTGCATCCTGGCCCAGGACCCAGTCTGTGC...TACCTGGGGACGGAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp GGTATCTGTCCGAATCCAGTCCTCGGCACGACCCACTGCTCTGGTGATAATTGGAGCGCCCATGGCCCCTaGGGTCACCACCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: GICPNPVLGTTHCSGDNWSAHGP*GHHHLQ
Trigger: CTGGAGGTGGTGGTGACCCCAGGGGCCATGGGCGCT...CCAATTATCACCAGAGCAGTGGGTCGTGCCGAGGACTGGATTCGGACAGATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CTTCATGTTGTTGGTGATGCACTCTCCAGGTCTGGGCTGGGGCACATCATTGTCCCCGCCCCCACTGTGTaGGCCCGGCTCGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: LHVVGDALSRSGLGHIIVPAPTV*ARLGAS
Trigger: AGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGG...GACAATGATGTGCCCCAGCCCAGACCTGGAGAGTGCATCACCAACAACATGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CACACACGGGCCACCCGTGGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGTGTGGTCCCAGAAGGTaGAGCCCCCAGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HTRATRGTLMRSYESNARCGPRR*SPQVQA
Trigger: GGCCTGGACCTGGGGGCTCCACCTTCTGGGACCACA...CCGAGCATTTGACTCATACGAGCGCATTAAAGTCCCACGGGTGGCCCGTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp AGGGGGTGGCCATCAGCTGGAAACACTGGCCTGTCCATGAGTGGGTGGTCCCGGAGAGAACTCAGAGGCTaGGATGGTCTTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RGWPSAGNTGLSMSGWSRRELRG*DGLPGP
Trigger: TGGGCCTGGAAGACCATCCCAGCCTCTGAGTTCTCT...CCGGGACCACCCACTCATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp CCCATTCGGCTGGGCTCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCTGCTCTGGTGATAATTaGCTCCGTCCCCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: PIRLGSRPRLRQRLGRSACSGDN*LRPQVV
Trigger: AACTACCTGGGGACGGAGCCAATTATCACCAGAGCA...GGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGCCCAGCCGAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446927.5
ENST00000458114.5
CDS-3UTR CCA 90 bp CCCTGTTCCAGGCAGGGCAAGTCCAGGGAGAGCTGCCACAGAGTGATGCCATCCAAAGCAGCTGTGACATaGCAGTGGTGGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PCSRQGKSRESCHRVMPSKAAVT*QWWQPG
Trigger: CCCTGGCTGCCACCACTGCCATGTCACAGCTGCTTT...GGATGGCATCACTCTGTGGCAGCTCTCCCTGGACTTGCCCTGCCTGGAACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CAA 72 bp AAGGGTGGTGAGAATCCACCAAAGCCACTGCCCCTCTaGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KGGENPPKPLPL*ARASGNRSSSG
Trigger: TCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGATTCTCACCACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp AAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGCTTCATGTTGTTGGTaGTGCACTCTCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KPLPLLARASGNRSSSGEASCCW*CTLQVW
Trigger: CCAGACCTGGAGAGTGCATCACCAACAACATGAAGC...CTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp AGGGGGTGGCCATCAGCTGGAAACACTGGCCTGTCCATGAGTGGGTGGTCCCGGACAGGATGCCCATGCTaGGCTTGGAGAACATGGCAA +
Preference number: 4 (lower is better)
Translates to: RGWPSAGNTGLSMSGWSRTGCPC*AWRTWQ
Trigger: TTGCCATGTTCTCCAAGCTCAGCATGGGCATCCTGT...CCGGGACCACCCACTCATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp AGCCAGGAAGGCAAGGTATCTGTCCGAATCCAGTCCTCGGCACGACCCACTGCTTGTCGCCGTCGCTGCTaGCGCCGACCAATCAGAATG +
Preference number: 4 (lower is better)
Translates to: SQEGKVSVRIQSSARPTACRRRC*RRPIRM
Trigger: CATTCTGATTGGTCGGCGTCAGCAGCGACGGCGACA...AGCAGTGGGTCGTGCCGAGGACTGGATTCGGACAGATACCTTGCCTTCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp AGGGCAGGGATAAAGCGAAGATGGTGTCCCGGGCGCCAACATAAAGTGTGTGGGGGACTGCGAACCGGGTaGGACAGGAGTCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RAGIKRRWCPGRQHKVCGGLRTG*DRSQPL
Trigger: GAGAGGCTGACTCCTGTCTCACCCGGTTCGCAGTCC...CCCACACACTTTATGTTGGCGCCCGGGACACCATCTTCGCTTTATCCCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416236.5
CDS-3UTR TCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTCCTGAGGCTGAGGGATaGAACACCGCCCGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTPEAEG*NTARLR
Trigger: GCGGAGCCGGGCGGTGTTTCATCCCTCAGCCTCAGG...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611975.4
CDS-3UTR GCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAGCAAGCTACGGCCTCTaGTCAGGGCCCCGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKASYGL*SGPRGY
Trigger: GTAGCCCCGGGGCCCTGAGCAGAGGCCGTAGCTTGC...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp TCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCAGGAAGGCAAGGTATCCATCCAGTCAATCCTaGGGGGTCTCTCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SRPRLRQRLGRSARKARYPSSQS*GVSPLR
Trigger: TCTCAGGGGAGAGACCCCGCAGGATTGACTGGATGG...ATACCTTGCCTTCCTGGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR GCA 90 bp GGACTGGAGAAACAAGAAGGCCTCCAGCAGCTACCAGTCCAGGGACTGGCCACAGGTCCTGGGCCAGGATaGACTCTGAGCAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GLEKQEGLQQLPVQGLATGPGPG*TLSSSG
Trigger: TCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGGACC...TGTGGCCAGTCCCTGGACTGGTAGCTGCTGGAGGCCTTCTTGTTTCTCCAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp AGGGAGGGTCTTGGCTGTAGCTTGTGGTCCCAGAAGGTGGAGCCCCCAGGTCCAGAGCATCTCGCTGGCTaGCCCATACCAAGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: REGLGCSLWSQKVEPPGPEHLAG*PIPSCK
Trigger: CTTACAGCTTGGTATGGGGCAGCCAGCGAGATGCTC...TGGACCTGGGGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAGACCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp CCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGCTCCAGGCAAATGAGAGTCAGGGATaGTGCGAGAATCCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PRCSPAWATHSSSRKLQANESQG*CENPQE
Trigger: TTCTTGGGGATTCTCGCAGCATCCCTGACTCTCATT...TGCCTGGAGCTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGATCCACCAAAGCCACTaGCCCTCTTGGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: APGMNEAHSQAKTRTQQEIHQSH*PSWPGP
Trigger: TGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGAT...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAATCTTTGGCTCCGCCTaGCCGCGGGTGCGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILIFGSA*PRVRRK
Trigger: CTTGCGCCGCACCCGCGGCCAGGCGGAGCCAAAGAT...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp TGGAGCCCCCAGGTCCAGGCCCACCTTGTCTCTAGCCAGAAGTTCCCTCTGTCGGGGATAAAGCGAAGATaGTGTCCCGGGCGCCAACAT +
Preference number: 4 (lower is better)
Translates to: WSPQVQAHLVSSQKFPLSGIKRR*CPGRQH
Trigger: ATGTTGGCGCCCGGGACACCATCTTCGCTTTATCCC...CGACAGAGGGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCTGGGGGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp GCCATAAAAGATGGGAGTCCCTGCCCCAAGCTCAGGTCGAAGCACAGCAACATCGTCGTCCATCTCTGCTaGAGGGTCTTCCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: AIKDGSPCPKLRSKHSNIVVHLC*RVFRPP
Trigger: CGGGGGCCGGAAGACCCTCCAGCAGAGATGGACGAC...GATGTTGCTGTGCTTCGACCTGAGCTTGGGGCAGGGACTCCCATCTTTTATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp AAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGTGTCCGAATGTCTTGTaGTCGGAAGGCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: KPLPLLARASGNRSSSGECPNVL*SEGTDS
Trigger: GCTGTCTGTGCCTTCCGACCACAAGACATTCGGACA...CTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp AGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCAGGCAGGGAGAGAGATGAGATCCGCACTGCTCGGTaGAGGTGTCCATCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SGWSRMKVSTRSGRERDEIRTAR*RCPSSV
Trigger: GACAGAGGATGGACACCTCCACCGAGCAGTGCGGAT...CTCATCTCTCTCCCTGCCTGACCGCGTACTCACCTTCATCCGGGACCACCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGGCACAGACTGGGTCCTaGGCCAGGATGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: APGMNEAHSQAKTRTQQEAQTGS*ARMHSE
Trigger: CTCAGAGTGCATCCTGGCCCAGGACCCAGTCTGTGC...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AAACACTGGCCTGTCCATGAGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCGTCACTCCACTGGGCTaGTGCCACACACAGGATGCC +
Preference number: 4 (lower is better)
Translates to: KHWPVHEWVVPDEGEYAVVTPLG*CHTQDA
Trigger: GGCATCCTGTGTGTGGCACCAGCCCAGTGGAGTGAC...GACCGCGTACTCACCTTCATCCGGGACCACCCACTCATGGACAGGCCAGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp ACAAAGAAAAGGATGGGGTCATGTGTACTGCTGCCCTTCCCACCCGGAAGGTCAAGCGCCCATGGCCCCTaGGGTCACCACCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: TKKRMGSCVLLPFPPGRSSAHGP*GHHHLQ
Trigger: CTGGAGGTGGTGGTGACCCCAGGGGCCATGGGCGCT...TGACCTTCCGGGTGGGAAGGGCAGCAGTACACATGACCCCATCCTTTTCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGAGGCATAAGCGCCCATaGCCCCTGGGGTCACCACCA +
Preference number: 4 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMRHKRP*PLGSPP
Trigger: TGGTGGTGACCCCAGGGGCCATGGGCGCTTATGCCT...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCCCGCCCCCACTGTGTaGGCCCGGCTCGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: PPASQWSLRSSDHLYTSGPAPTV*ARLGAS
Trigger: AGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGG...ACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCACCCGCCCCCACTGTGTaGGCCCGGCTCGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPPAPTV*ARLGAS
Trigger: AGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGG...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp ACAAAGAAAAGGATGGGGTCATGTGTACTGCTGCCCTTCCCACCCGGAAGGTCAAGCCACTGCCCCTCTTaGCCAGGGCCAGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: TKKRMGSCVLLPFPPGRSSHCPS*PGPAAT
Trigger: GGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCT...TGACCTTCCGGGTGGGAAGGGCAGCAGTACACATGACCCCATCCTTTTCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCAGGCAGGGAGAGAGATGAGCCAGTTAGCCGAATGTaGGCTGGGCTTGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SGWSRMKVSTRSGRERDEPVSRM*AGLGQG
Trigger: TCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGG...CTCATCTCTCTCCCTGCCTGACCGCGTACTCACCTTCATCCGGGACCACCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp ATAAGCGCCCATGGCCCCTGGGGTCACCACCACCTCCAGTCCATCCCGCCGGGGGAGAGGCATTGGCAATaGCGAGAATCTGGACAAAAT +
Preference number: 4 (lower is better)
Translates to: ISAHGPWGHHHLQSIPPGERHWQ*RESGQN
Trigger: ATTTTGTCCAGATTCTCGCCATTGCCAATGCCTCTC...CCCCGGCGGGATGGACTGGAGGTGGTGGTGACCCCAGGGGCCATGGGCGCTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000420077.5
CDS-3UTR CCA 90 bp AAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGAGGTGAGAGGCATTaGCAATGGCGAGAATCTGGA +
Preference number: 4 (lower is better)
Translates to: KPLPLLARASGNRSSSGEGGERH*QWRESG
Trigger: TCCAGATTCTCGCCATTGCCAATGCCTCTCACCTCC...CTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420077.5
CDS-3UTR CCA 90 bp TCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCAGGAAGGCAAGGTATCACACGGGCCACCCGTaGGACTTTAATGCGCTCGTA +
Preference number: 4 (lower is better)
Translates to: SRPRLRQRLGRSARKARYHTGHP*DFNALV
Trigger: TACGAGCGCATTAAAGTCCCACGGGTGGCCCGTGTG...ATACCTTGCCTTCCTGGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446927.5
ENST00000458114.5
CDS-3UTR CCA 90 bp CCCTGTTCCAGGCAGGGCAAGTCCAGGGAGAGCTGCCACAGAGTGATGCCATCCAGTGCTGAGGATGGGTaGCACGTCCTCGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: PCSRQGKSRESCHRVMPSSAEDG*HVLVFW
Trigger: CCAAAACACGAGGACGTGCCACCCATCCTCAGCACT...GGATGGCATCACTCTGTGGCAGCTCTCCCTGGACTTGCCCTGCCTGGAACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GGACTGGAGAAACAAGAAGGCCTCCAGCAGCTACCAGTCCAGGGACTGGCCACAAGGCAGGGAGAGAGATaGGCCAAAGTGCCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: GLEKQEGLQQLPVQGLATRQGER*AKVPEL
Trigger: AAGCTCCGGCACTTTGGCTCATCTCTCTCCCTGCCT...TGTGGCCAGTCCCTGGACTGGTAGCTGCTGGAGGCCTTCTTGTTTCTCCAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CCCCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGATCTTCAAGAACGCTaGGCTGAGCTCCGATCCGCA +
Preference number: 4 (lower is better)
Translates to: PQPPPGLFLPARLQPESKDLQER*AELRSA
Trigger: TGCGGATCGGAGCTCAGCTCAGCGTTCTTGAAGATC...TTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGCCACAAGTGAGGAGGTaGGAGGCATTGGCAATGGCG +
Preference number: 4 (lower is better)
Translates to: APGMNEAHSQAKTRTQQEPQVRR*EALAMA
Trigger: CGCCATTGCCAATGCCTCTCACCTCCTCACTTGTGG...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357877.7
CDS-3UTR TCA 90 bp CGGCTGGGCTCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCAGGAAGTTTAATGCGCTCGTATaGGTCAAATGCTCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RLGSRPRLRQRLGRSARKFNALV*VKCSGS
Trigger: ACTTCCCGAGCATTTGACTCATACGAGCGCATTAAA...CTTCCTGGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGCCCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446927.5
ENST00000458114.5
CDS-3UTR TCA 90 bp CCCCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGTGCCTGGCCCTAGGTaGTTAGAGCAGGCAGATAGT +
Preference number: 4 (lower is better)
Translates to: PQPPPGLFLPARLQPESKVPGPR*LEQADS
Trigger: ACTATCTGCCTGCTCTAATCACCTAGGGCCAGGCAC...TTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp TCTATGTCTTGGACCAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAAAGATGGGAGTCCCTaGCCCAAGCTCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: SMSWTNPRCSPAWATHSSKDGSP*PKLRSK
Trigger: CTTCGACCTGAGCTTGGGGCAGGGACTCCCATCTTT...GGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCAAGACATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp GCTGGGGCGTTCAGCCAGGAAGGCAAGGTATCTGTCCGAATCCAGTCCTCGGCATACCAAGCTGTAAGCTaGTACCACATGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: AGAFSQEGKVSVRIQSSAYQAVS*YHMGCP
Trigger: GGGGCAGCCCATGTGGTAGCAGCTTACAGCTTGGTA...TGCCGAGGACTGGATTCGGACAGATACCTTGCCTTCCTGGCTGAACGCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR GCA 90 bp CCACCAAAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGAGAGTCAGGGATGCTaGGAGAATCCCCAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PPKPLPLLARASGNRSSSESQGC*ENPQEE
Trigger: TTCTTCTTGGGGATTCTCGCAGCATCCCTGACTCTC...TGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp TCGGCTGGGCTCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCAGGAAAATGAGAGTCAGGGATaGTGCGAGAATCCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SAGLKATAATKAGAFSQENESQG*CENPQE
Trigger: TTCTTGGGGATTCTCGCAGCATCCCTGACTCTCATT...TTCCTGGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGCCCAGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR GCA 90 bp CACACACGGGCCACCCGTGGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGATCCACCAAAGCCACTaGCCCTCTTGGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: HTRATRGTLMRSYESNARIHQSH*PSWPGP
Trigger: TGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGAT...CCGAGCATTTGACTCATACGAGCGCATTAAAGTCCCACGGGTGGCCCGTGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR GCA 90 bp CCAGTCCTCGGCACGACCCACTGCTCTGGTGATAATTGGCTCCGTCCCCAGGTACTCGGCACGACCCACTaGTCTGGTGATAATTGGCTC +
Preference number: 4 (lower is better)
Translates to: PVLGTTHCSGDNWLRPQVLGTTH*SGDNWL
Trigger: GAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAG...TACCTGGGGACGGAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420077.5
ENST00000446927.5
ENST00000458114.5
CDS-3UTR GCA 90 bp ATCTGTCCGAATCCAGTCCTCGGCACGACCCACTGCTCTGGTGATAATTGGCTCGCTCAAGGCCACGGCTaGGACAAAGGCTGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: ICPNPVLGTTHCSGDNWLAQGHG*DKGWGV
Trigger: AACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGC...GAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAGGACTGGATTCGGACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446927.5
ENST00000458114.5
CDS-3UTR CCA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGAGAGGCCGGCATCTTTaGCTCCGCCTGGCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVRGRHL*LRLAAG
Trigger: ACCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCT...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GCTGGGGCGTTCAGCCAGGAAGGCAAGGTATCTGTCCGAATCCAGTCCTCGGCAGTCAGCCTCAGAGATTaGAAGCGAGGTTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AGAFSQEGKVSVRIQSSAVSLRD*KRGSGH
Trigger: GTGCCCAGAACCTCGCTTCCAATCTCTGAGGCTGAC...TGCCGAGGACTGGATTCGGACAGATACCTTGCCTTCCTGGCTGAACGCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTGTCGTCCATCTCTGCTaGAGGGTCTTCCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTVVHLC*RVFRPP
Trigger: CGGGGGCCGGAAGACCCTCCAGCAGAGATGGACGAC...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGGCCATGCTCAGGCCCTaGACAGAGCAGGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: APGMNEAHSQAKTRTQQEAMLRP*TEQVSF
Trigger: AAAGCTGACCTGCTCTGTCCAGGGCCTGAGCATGGC...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GTCCGAATCCAGTCCTCGGCACGACCCACTGCTCTGGTGATAATTGGCTCCGTCGTGACCAGCAGGGGGTaGCCATCAGCTGGAAACACT +
Preference number: 4 (lower is better)
Translates to: VRIQSSARPTALVIIGSVVTSRG*PSAGNT
Trigger: AGTGTTTCCAGCTGATGGCCACCCCCTGCTGGTCAC...GACGGAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAGGACTGGATTCGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp TCGCTGCTGACGCCGACCAATCAGAATGAGAGTCAGGGATGCTGCGAGAATCCCGTCACTCCACTGGGCTaGTGCCACACACAGGATGCC +
Preference number: 4 (lower is better)
Translates to: SLLTPTNQNESQGCCENPVTPLG*CHTQDA
Trigger: GGCATCCTGTGTGTGGCACCAGCCCAGTGGAGTGAC...GGGATTCTCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGCGTCAGCAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGGTCACTCCACTGGGCTaGTGCCACACACAGGATGCC +
Preference number: 4 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMVTPLG*CHTQDA
Trigger: GGCATCCTGTGTGTGGCACCAGCCCAGTGGAGTGAC...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGCGAGTGGTCAAGCAGGCTCGGAGCATCTCGCTaGCTGCCCCATACCAAGCTG +
Preference number: 4 (lower is better)
Translates to: KTRTQQEKPRAMCEWSSRLGASR*LPHTKL
Trigger: CAGCTTGGTATGGGGCAGCCAGCGAGATGCTCCGAG...CCTGCTTGACCACTCGCACATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTATGTGGTCCCAGAAGGTaGAGCCCCCAGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILCGPRR*SPQVQA
Trigger: GGCCTGGACCTGGGGGCTCCACCTTCTGGGACCACA...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTTGTGGTCCCAGAAGGTaGAGCCCCCAGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLCGPRR*SPQVQA
Trigger: GGCCTGGACCTGGGGGCTCCACCTTCTGGGACCACA...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGTCACACGGGCCACCCGTaGGACTTTAATGCGCTCGTA +
Preference number: 4 (lower is better)
Translates to: PTTSRALPSGQAPTRKQSHTGHP*DFNALV
Trigger: TACGAGCGCATTAAAGTCCCACGGGTGGCCCGTGTG...ACTTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAGCCTCCCGAGTAGCTaGGACTACAGGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILSLPSS*DYRPPP
Trigger: TGGCGGGGGCCTGTAGTCCCAGCTACTCGGGAGGCT...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGAGCACCAGGGTCAGTTaGGATGCAGAGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQSTRVS*DAEGAG
Trigger: CCCTGCTCCCTCTGCATCCCAACTGACCCTGGTGCT...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGTCCAGGGGGCTCATGTaGCTCCCAGCAAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQSRGLM*LPAKGR
Trigger: TCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGA...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp AGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCAGGCAGGGAGAGAGATGAGGCTTCATGTTGTTGGTaGTGCACTCTCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SGWSRMKVSTRSGRERDEASCCW*CTLQVW
Trigger: CCAGACCTGGAGAGTGCATCACCAACAACATGAAGC...CTCATCTCTCTCCCTGCCTGACCGCGTACTCACCTTCATCCGGGACCACCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp TGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAATCCACCAAAGAGGCAGGGAGAGAGATaGGCCAAAGTGCCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: WAGLGQGSSRKGGENPPKRQGER*AKVPEL
Trigger: AAGCTCCGGCACTTTGGCTCATCTCTCTCCCTGCCT...CTTTGGTGGATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp AAACTCCCATCCCCGTCCTCACCTCGGGGAAAGCCACTTCTGCCTTCTCTCTTCTCAAGAACGCTGAGCTaGGCTCCGATCCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: KLPSPSSPRGKPLLPSLFSRTLS*APIRTA
Trigger: AGCAGTGCGGATCGGAGCTCAGCTCAGCGTTCTTGA...GAAGAGAGAAGGCAGAAGTGGCTTTCCCCGAGGTGAGGACGGGGATGGGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GCCGAATGTGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAATCGATCTTCAAGAACGCTaGGCTGAGCTCCGATCCGCA +
Preference number: 4 (lower is better)
Translates to: AECGLGLGKDQAGRVVRIDLQER*AELRSA
Trigger: TGCGGATCGGAGCTCAGCTCAGCGTTCTTGAAGATC...GATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAGGCCAGGATGCACTCTaGGCAGCTCTGGAGACGGCC +
Preference number: 4 (lower is better)
Translates to: RQRSGPKPIQAQREQILKGQDAL*AALETA
Trigger: GGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCC...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCGGCCAGGATGCACTCTaGGCAGCTCTGGAGACGGCC +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSGQDAL*AALETA
Trigger: GGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCC...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp AAACACTGGCCTGTCCATGAGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCGCCGACCAATCAGAATaGGAGTCAGGGATGCTGCGA +
Preference number: 4 (lower is better)
Translates to: KHWPVHEWVVPDEGEYAVADQSE*ESGMLR
Trigger: TCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGC...GACCGCGTACTCACCTTCATCCGGGACCACCCACTCATGGACAGGCCAGTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp GTGGCTAGAGGAGCCCCAGTTAGCCGAATGTGGGCTGGGCTTGGGCAAGGATCAAAGCAGGAAGGGTGGTaGGAATCCACCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: VARGAPVSRMWAGLGQGSKQEGW*ESTKAT
Trigger: AGTGGCTTTGGTGGATTCTCACCACCCTTCCTGCTT...TGATCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGGGGCTCCTCTAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp GGAGCCCCAGTTAGCCGAATGTGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGAAGCAGGAAGGGTGGTaGGAATCCACCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: GAPVSRMWAGLGQGSSRKKQEGW*ESTKAT
Trigger: AGTGGCTTTGGTGGATTCTCACCACCCTTCCTGCTT...CTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGGGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp ATCTGTAGTGACCAGCAGGGGGTGGCCATCAGCTGGAAACACTGGCCTGTCCATCCACAAGTGAGGAGGTaGGAGGCATTGGCAATGGCG +
Preference number: 4 (lower is better)
Translates to: ICSDQQGVAISWKHWPVHPQVRR*EALAMA
Trigger: CGCCATTGCCAATGCCTCTCACCTCCTCACTTGTGG...ATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCCCTGCTGGTCACTACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420077.5
CDS-3UTR TCA 90 bp TCGCTGCTGACGCCGACCAATCAGAATGAGAGTCAGGGATGCTGCGAGAATCCCCGAAGGTGCCACAAGTaGGGAGGTGAGAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: SLLTPTNQNESQGCCENPRRCHK*GGERHW
Trigger: CCAATGCCTCTCACCTCCTCACTTGTGGCACCTTCG...GGGATTCTCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGCGTCAGCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420077.5
CDS-3UTR TCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAGCCATTACAGCTGCTaGCCGCTGAGCTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: APGMNEAHSQAKTRTQQESHYSC*PLSWLK
Trigger: TTTGAGCCAGCTCAGCGGTCAGCAGCTGTAATGGCT...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAGGCCTCAGCCTCCCTaGCTAGACAGGTCCAATCAT +
Preference number: 4 (lower is better)
Translates to: APGMNEAHSQAKTRTQQERPQPP*LDRSNH
Trigger: ATGATTGGACCTGTCTAGTCAGGGAGGCTGAGGCCT...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp AGGGCAGGGATAAAGCGAAGATGGTGTCCCGGGCGCCAACATAAAGTGTGTGGGCCATCCAGTCAATCCTaGGGGGTCTCTCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: RAGIKRRWCPGRQHKVCGPSSQS*GVSPLR
Trigger: TCTCAGGGGAGAGACCCCGCAGGATTGACTGGATGG...CCCACACACTTTATGTTGGCGCCCGGGACACCATCTTCGCTTTATCCCTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416236.5
CDS-3UTR GCA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCATGGACCAACCCTCGGTaGTCCCCGGCATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPWTNPR*SPAWAT
Trigger: TGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCA...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGCATGGCAAGACCACATaGGCAGCTGTAGCCACGGGA +
Preference number: 4 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMHGKTT*AAVATG
Trigger: TCCCGTGGCTACAGCTGCGCATGTGGTCTTGCCATG...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGGGTCATGTGTACTGCTaGCCTTCCCACCCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMGHVYC*PSHPEG
Trigger: ACCTTCCGGGTGGGAAGGGCAGCAGTACACATGACC...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGGGGTCATGTGTACTaGTGCCCTTCCCACCCGGAA +
Preference number: 4 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMWGHVY*CPSHPE
Trigger: TTCCGGGTGGGAAGGGCAGCAGTACACATGACCCCA...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CAAATACACATAGAGCTCAGCTTCCAGGGACTGGAGAAACAAGAAGGCCTCCAGAGAGGCCGGCATCTTTaGCTCCGCCTGGCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: QIHIELSFQGLEKQEGLQRGRHL*LRLAAG
Trigger: ACCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCT...CTGGAGGCCTTCTTGTTTCTCCAGTCCCTGGAAGCTGAGCTCTATGTGTATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGTTGGAAGCGAGGTTCTaGGCACCGAGCGGGGGACGC +
Preference number: 4 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVLEARF*APSGGR
Trigger: GCGTCCCCCGCTCGGTGCCCAGAACCTCGCTTCCAA...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGGGGATAAAGCGAAGATaGTGTCCCGGGCGCCAACAT +
Preference number: 4 (lower is better)
Translates to: APGMNEAHSQAKTRTQQEGIKRR*CPGRQH
Trigger: ATGTTGGCGCCCGGGACACCATCTTCGCTTTATCCC...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCGTCCATCTCTGCTaGAGGGTCTTCCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVVVHLC*RVFRPP
Trigger: CGGGGGCCGGAAGACCCTCCAGCAGAGATGGACGAC...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAGTCGTCCATCTCTGCTaGAGGGTCTTCCGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: RQRSGPKPIQAQREQILKVVHLC*RVFRPP
Trigger: CGGGGGCCGGAAGACCCTCCAGCAGAGATGGACGAC...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGGCCATGCTCAGGCCCTaGACAGAGCAGGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVAMLRP*TEQVSF
Trigger: AAAGCTGACCTGCTCTGTCCAGGGCCTGAGCATGGC...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp TGCGACAAAGGCTGGGGCGTTCAGCCAGGAAGGCAAGGTATCTGTCCGAATCCAGCCATGCTCAGGCCCTaGACAGAGCAGGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: CDKGWGVQPGRQGICPNPAMLRP*TEQVSF
Trigger: AAAGCTGACCTGCTCTGTCCAGGGCCTGAGCATGGC...TGGATTCGGACAGATACCTTGCCTTCCTGGCTGAACGCCCCAGCCTTTGTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGGCCTGTCCATGAGTaGGTGGTCCCGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMWPVHE*VVPDEG
Trigger: ACCTTCATCCGGGACCACCCACTCATGGACAGGCCA...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCAGGCAGGGAGAGAGATGAGATCAGCTGGAAACACTaGCCTGTCCATGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SGWSRMKVSTRSGRERDEISWKH*PVHEWV
Trigger: CACCCACTCATGGACAGGCCAGTGTTTCCAGCTGAT...CTCATCTCTCTCCCTGCCTGACCGCGTACTCACCTTCATCCGGGACCACCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CGAATGTCTTGTGGTCGGAAGGCACAGACAGCAGAGATAGTAGCCCCCTCCCACGGGGTGGCCATCAGCTaGAAACACTGGCCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: RMSCGRKAQTAEIVAPSHGVAIS*KHWPVH
Trigger: ATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCC...GTGGGAGGGGGCTACTATCTCTGCTGTCTGTGCCTTCCGACCACAAGACATTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAGCTCCAGGCACAGACTaGGTCCTGGGCCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILAPGTD*VLGQDA
Trigger: TGCATCCTGGCCCAGGACCCAGTCTGTGCCTGGAGC...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp AGATGCCATAAAAGATGGGAGTCCCTGCCCCAAGCTCAGGTCGAAGCACAGCAAGCTCCAGGCACAGACTaGGTCCTGGGCCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: RCHKRWESLPQAQVEAQQAPGTD*VLGQDA
Trigger: TGCATCCTGGCCCAGGACCCAGTCTGTGCCTGGAGC...TTGCTGTGCTTCGACCTGAGCTTGGGGCAGGGACTCCCATCTTTTATGGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCCGGTGCTCCCCGGCATaGGCCACACACTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSRCSPA*ATHSSS
Trigger: GCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCG...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAGGCATAAGCGCCCATaGCCCCTGGGGTCACCACCA +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILRHKRP*PLGSPP
Trigger: TGGTGGTGACCCCAGGGGCCATGGGCGCTTATGCCT...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp AGATGGATGTTTCATCACATGTGGCTAGAGGAGCCCCAGTTAGCCGAATGTGGGTGTGGTCCCAGAAGGTaGAGCCCCCAGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RWMFHHMWLEEPQLAECGCGPRR*SPQVQA
Trigger: GGCCTGGACCTGGGGGCTCCACCTTCTGGGACCACA...CCCACATTCGGCTAACTGGGGCTCCTCTAGCCACATGTGATGAAACATCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CAAATACACATAGAGCTCAGCTTCCAGGGACTGGAGAAACAAGAAGGCCTCCAGAGCCACTGCCCCTCTTaGCCAGGGCCAGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: QIHIELSFQGLEKQEGLQSHCPS*PGPAAT
Trigger: GGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCT...CTGGAGGCCTTCTTGTTTCTCCAGTCCCTGGAAGCTGAGCTCTATGTGTATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGTAGAGAACTCAGAGGCTaGGATGGTCTTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PTTSRALPSGQAPTRKQSRELRG*DGLPGP
Trigger: TGGGCCTGGAAGACCATCCCAGCCTCTGAGTTCTCT...ACTTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGAATCAGGCAAAGGTCTaGCCCCAAGCCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQNQAKV*PQAHPG
Trigger: GCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GATGCTGCGAGAATCCCCAAGAAGAAGCCAGCCAGTCCCGCCCCCACTGTGTGGTGCTCTGGTGATAATTaGCTCCGTCCCCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: DAARIPKKKPASPAPTVWCSGDN*LRPQVV
Trigger: AACTACCTGGGGACGGAGCCAATTATCACCAGAGCA...CCACACAGTGGGGGCGGGACTGGCTGGCTTCTTCTTGGGGATTCTCGCAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGTTACCAGTCCAGGGACTaGCCACAGTCAGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: PTTSRALPSGQAPTRKQSYQSRD*PQSVRL
Trigger: GAGTCTGACTGACTGTGGCCAGTCCCTGGACTGGTA...ACTTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CAA 72 bp CTAGAGGAGCCCCAGTTAGCCGAATGTGGGCTGGGCTaGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAATC +
Preference number: 4 (lower is better)
Translates to: LEEPQLAECGLG*GKDQAGRVVRI
Trigger: GATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGGGGCTCCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp CCACCAAAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCACATGTTTTAGTTCTCTaGAGGGACCATTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PPKPLPLLARASGNRSSSHVLVL*RDHSAL
Trigger: CAGTGCTGAATGGTCCCTTCAGAGAACTAAAACATG...TGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGATCATACTCTTTCCCTaGGAGGCTGGTCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: APGMNEAHSQAKTRTQQEIILFP*EAGHPV
Trigger: CACAGGGTGACCAGCCTCTCAGGGAAAGAGTATGAT...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GGACTGGAGAAACAAGAAGGCCTCCAGCAGCTACCAGTCCAGGGACTGGCCACAATCATACTCTTTCCCTaGGAGGCTGGTCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: GLEKQEGLQQLPVQGLATIILFP*EAGHPV
Trigger: CACAGGGTGACCAGCCTCTCAGGGAAAGAGTATGAT...TGTGGCCAGTCCCTGGACTGGTAGCTGCTGGAGGCCTTCTTGTTTCTCCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GCCATAAAAGATGGGAGTCCCTGCCCCAAGCTCAGGTCGAAGCACAGCAACATCTCAAGAACGCTGAGCTaGGCTCCGATCCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: AIKDGSPCPKLRSKHSNISRTLS*APIRTA
Trigger: AGCAGTGCGGATCGGAGCTCAGCTCAGCGTTCTTGA...GATGTTGCTGTGCTTCGACCTGAGCTTGGGGCAGGGACTCCCATCTTTTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp CCCTGTTCCAGGCAGGGCAAGTCCAGGGAGAGCTGCCACAGAGTGATGCCATCCAGAGGAGACATCTGCTaGCTCTATGTCTTGGACCAA +
Preference number: 4 (lower is better)
Translates to: PCSRQGKSRESCHRVMPSRGDIC*LYVLDQ
Trigger: TTGGTCCAAGACATAGAGTCAGCAGATGTCTCCTCT...GGATGGCATCACTCTGTGGCAGCTCTCCCTGGACTTGCCCTGCCTGGAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTTGTCGCCGTCGCTGCTaGCGCCGACCAATCAGAATG +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTCRRRC*RRPIRM
Trigger: CATTCTGATTGGTCGGCGTCAGCAGCGACGGCGACA...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGTATAGGGGGCCAGGGATaGAGGTTTACAGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: PTTSRALPSGQAPTRKQSIGGQG*RFTGVQ
Trigger: CTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTAT...ACTTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CCCCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGCAAGGGTGTCACCCTaGGTAGTCACTGATTGCAAA +
Preference number: 4 (lower is better)
Translates to: PQPPPGLFLPARLQPESKARVSP*VVTDCK
Trigger: TTTGCAATCAGTGACTACTCAGGGTGACACCCTTGC...TTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGAGAGCTGCCACAGAGTaGTGCCATCCTAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVRAATE*CHPNLA
Trigger: GGCCAAGTTAGGATGGCATCACTCTGTGGCAGCTCT...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAATGCCTAATGAAGGCCTaGGGCCTCAGCCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKCLMKA*GLSLPD
Trigger: GTCAGGGAGGCTGAGGCCTCAGGCCTTCATTAGGCA...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTATGCCTAATGAAGGCCTaGGGCCTCAGCCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILCLMKA*GLSLPD
Trigger: GTCAGGGAGGCTGAGGCCTCAGGCCTTCATTAGGCA...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAACGTCGTCCATCTCTaGTGGAGGGTCTTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKNVVHL*WRVFRP
Trigger: GGGCCGGAAGACCCTCCAGCAGAGATGGACGACGTT...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp TCTGGAGACGGCCACAGTTGGTTGTATTCACTTGTGTCACCTCAGTACGGGAGCAGCACAGCAACATCCTaGAGGACACTGGAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SGDGHSWLYSLVSPQYGSSTATS*RTLEAR
Trigger: CCGGGCCTCCAGTGTCCTGCAGGATGTTGCTGTGCT...GCTCCCGTACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGAAAGATGGGAGTCCCTaGCCCAAGCTCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVKDGSP*PKLRSK
Trigger: CTTCGACCTGAGCTTGGGGCAGGGACTCCCATCTTT...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp GTCCCAGAAGGTGGAGCCCCCAGGTCCAGGCCCACCTTGTCTCTAGCCAGAAGTAGAGATGAGCCAAAGTaGCGGAGCTTCATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: VPEGGAPRSRPTLSLARSRDEPK*RSFMLL
Trigger: CAACAACATGAAGCTCCGGCACTTTGGCTCATCTCT...ACTTCTGGCTAGAGACAAGGTGGGCCTGGACCTGGGGGCTCCACCTTCTGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp ACAAAGAAAAGGATGGGGTCATGTGTACTGCTGCCCTTCCCACCCGGAAGGTCAAGCTCCGATCCGCACTaGTCGGTGGAGGTGTCCATC +
Preference number: 4 (lower is better)
Translates to: TKKRMGSCVLLPFPPGRSSSDPH*SVEVSI
Trigger: GATGGACACCTCCACCGAGCAGTGCGGATCGGAGCT...TGACCTTCCGGGTGGGAAGGGCAGCAGTACACATGACCCCATCCTTTTCTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp AGATGCCATAAAAGATGGGAGTCCCTGCCCCAAGCTCAGGTCGAAGCACAGCAAAGCTCCGATCCGCACTaGTCGGTGGAGGTGTCCATC +
Preference number: 4 (lower is better)
Translates to: RCHKRWESLPQAQVEAQQSSDPH*SVEVSI
Trigger: GATGGACACCTCCACCGAGCAGTGCGGATCGGAGCT...TTGCTGTGCTTCGACCTGAGCTTGGGGCAGGGACTCCCATCTTTTATGGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAGGTCCTGGGCCAGGATaGACTCTGAGCAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILGPGPG*TLSSSG
Trigger: TCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGGACC...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAGGTCCTGGGCCAGGATaGACTCTGAGCAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKGPGPG*TLSSSG
Trigger: TCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGGACC...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp GCCACCCGTGGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGGAAGTCTCCTGCTACCACATGGGCTaGCCCACCCTCCTGACATTC +
Preference number: 4 (lower is better)
Translates to: ATRGTLMRSYESNAREVSCYHMG*PTLLTF
Trigger: GAATGTCAGGAGGGTGGGGCAGCCCATGTGGTAGCA...GGAGACTTCCCGAGCATTTGACTCATACGAGCGCATTAAAGTCCCACGGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR GCA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGCTCGGCACGACCCACTaGTCTGGTGATAATTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVLGTTH*SGDNWL
Trigger: GAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAG...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp AGCTGTAGCCACGGGAACTTCAAACACTACTGGACGTTCTCCAGGCTCTTTAGGGCTCAAGGCCACGGCTaGGACAAAGGCTGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: SCSHGNFKHYWTFSRLFRAQGHG*DKGWGV
Trigger: AACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGC...CCTAAAGAGCCTGGAGAACGTCCAGTAGTGTTTGAAGTTCCCGTGGCTACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR GCA 90 bp TCATCCAAGCCCATACAGAGGGTGAGCAGCTCCCTCCTTCCACACCAAGCATGGCAGGGTCTAAAGTTCTaGAGGCAACGCCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: SSKPIQRVSSSLLPHQAWQGLKF*RQRPHS
Trigger: GGAATGGGGGCGTTGCCTGCAGAACTTTAGACCCTG...CCATGCTTGGTGTGGAAGGAGGGAGCTGCTCACCCTCTGTATGGGCTTGGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGTAAGCCTAGAGCCATGTaGGAGTGGTCAAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PTTSRALPSGQAPTRKQSKPRAM*EWSSRK
Trigger: CTTCCTGCTTGACCACTCGCACATGGCTCTAGGCTT...ACTTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GCCACCCGTGGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGGAAGTCTCCTCTCCAGGTCTGGGCTaGGGCACATCATTGTCCACG +
Preference number: 4 (lower is better)
Translates to: ATRGTLMRSYESNAREVSSPGLG*GTSLST
Trigger: CGTGGACAATGATGTGCCCCAGCCCAGACCTGGAGA...GGAGACTTCCCGAGCATTTGACTCATACGAGCGCATTAAAGTCCCACGGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGCACTCTGAGCAGCTCTaGAGACGGCCACAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMHSEQL*RRPQLV
Trigger: AACCAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTG...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAGCACAGACTGGGTCCTaGGCCAGGATGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKAQTGS*ARMHSE
Trigger: CTCAGAGTGCATCCTGGCCCAGGACCCAGTCTGTGC...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCGCTCCAGGCACAGACTaGGTCCTGGGCCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSAPGTD*VLGQDA
Trigger: TGCATCCTGGCCCAGGACCCAGTCTGTGCCTGGAGC...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp TCGCTGCTGACGCCGACCAATCAGAATGAGAGTCAGGGATGCTGCGAGAATCCCGCTGACTCTATGTCTTaGACCAACCCTCGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLTPTNQNESQGCCENPADSMS*TNPRCS
Trigger: GGAGCACCGAGGGTTGGTCCAAGACATAGAGTCAGC...GGGATTCTCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGCGTCAGCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAAGCGCCCATGGCCCCTaGGGTCACCACCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPSAHGP*GHHHLQ
Trigger: CTGGAGGTGGTGGTGACCCCAGGGGCCATGGGCGCT...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGAGGCATAAGCGCCCATaGCCCCTGGGGTCACCACCA +
Preference number: 4 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVRHKRP*PLGSPP
Trigger: TGGTGGTGACCCCAGGGGCCATGGGCGCTTATGCCT...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GCCATAAAAGATGGGAGTCCCTGCCCCAAGCTCAGGTCGAAGCACAGCAACATCCCAGTTAGCCGAATGTaGGCTGGGCTTGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: AIKDGSPCPKLRSKHSNIPVSRM*AGLGQG
Trigger: TCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGG...GATGTTGCTGTGCTTCGACCTGAGCTTGGGGCAGGGACTCCCATCTTTTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp TGGGCTCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCAGGAAGGCAAATGTTTCATCACATGTaGCTAGAGGAGCCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: WAQGHGCDKGWGVQPGRQMFHHM*LEEPQL
Trigger: TAACTGGGGCTCCTCTAGCCACATGTGATGAAACAT...TTGCCTTCCTGGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp ATGTCTTGTGGTCGGAAGGCACAGACAGCAGAGATAGTAGCCCCCTCCCACTGGCCCCCAGCATCTCAGTaGTCACTCCGTTCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: MSCGRKAQTAEIVAPSHWPPASQ*SLRSSD
Trigger: ATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG...CCAGTGGGAGGGGGCTACTATCTCTGCTGTCTGTGCCTTCCGACCACAAGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp AGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCAGGCAGGGAGAGAGATGAGTGCTCTGGTGATAATTaGCTCCGTCCCCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: SGWSRMKVSTRSGRERDECSGDN*LRPQVV
Trigger: AACTACCTGGGGACGGAGCCAATTATCACCAGAGCA...CTCATCTCTCTCCCTGCCTGACCGCGTACTCACCTTCATCCGGGACCACCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGTACCAGTCCAGGGACTaGCCACAGTCAGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVYQSRD*PQSVRL
Trigger: GAGTCTGACTGACTGTGGCCAGTCCCTGGACTGGTA...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CAAATACACATAGAGCTCAGCTTCCAGGGACTGGAGAAACAAGAAGGCCTCCAGAGCCTCCCGAGTAGCTaGGACTACAGGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: QIHIELSFQGLEKQEGLQSLPSS*DYRPPP
Trigger: TGGCGGGGGCCTGTAGTCCCAGCTACTCGGGAGGCT...CTGGAGGCCTTCTTGTTTCTCCAGTCCCTGGAAGCTGAGCTCTATGTGTATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTTCCAGGGGGCTCATGTaGCTCCCAGCAAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLSRGLM*LPAKGR
Trigger: TCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGA...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AGGCTGGGGCGTTCAGCCAGGAAGGCAAGGTATCTGTCCGAATCCAGTCCTCGGCAGTCAATCAGAGATTaGAAGCGAGGTTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RLGRSARKARYLSESSPRQSIRD*KRGSGH
Trigger: GTGCCCAGAACCTCGCTTCCAATCTCTGATTGACTG...CCGAGGACTGGATTCGGACAGATACCTTGCCTTCCTGGCTGAACGCCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458114.5
3UTR CAA 72 bp GCAGCTCTGGAGACGGCCACAGTTGGTTGTATTCACTaGTGTCACCTCAGTACGGGAGCCAACCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: AALETATVGCIH*CHLSTGANQEP
Trigger: TGGCTCCTGGTTGGCTCCCGTACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCGGACTGCGAACCGGGTaGGACAGGAGTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QWSLRSSDHLYTSGHLPSGLRTG*DRSQPQ
Trigger: CTGAGGCTGACTCCTGTCTCACCCGGTTCGCAGTCC...GCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGCTACAGTTCTGTCTGTaGGCCTCAGGAACCATCCAG +
Preference number: 4 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVLQFCL*ASGTIQ
Trigger: CTGGATGGTTCCTGAGGCTCACAGACAGAACTGTAG...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GGGATAAAGCGAAGATGGTGTCCCGGGCGCCAACATAAAGTGTGTGGGAGGCAGCTACAGTTCTGTCTGTaGGCCTCAGGAACCATCCAG +
Preference number: 4 (lower is better)
Translates to: GIKRRWCPGRQHKVCGRQLQFCL*ASGTIQ
Trigger: CTGGATGGTTCCTGAGGCTCACAGACAGAACTGTAG...CTGCCTCCCACACACTTTATGTTGGCGCCCGGGACACCATCTTCGCTTTATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416236.5
CDS-3UTR TCA 90 bp AAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGCGAGTGGTCAAGCAGGCTACAGTTCTGTCTGTaGGCCTCAGGAACCATCCAG +
Preference number: 4 (lower is better)
Translates to: KTRTQQEKPRAMCEWSSRLQFCL*ASGTIQ
Trigger: CTGGATGGTTCCTGAGGCTCACAGACAGAACTGTAG...CCTGCTTGACCACTCGCACATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp AACGCTGAGCTGAGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCATCCTCTGTAGAGGAGACATCTGCTaGCTCTATGTCTTGGACCAA +
Preference number: 4 (lower is better)
Translates to: NAELSSDPHCSVEVSILCRGDIC*LYVLDQ
Trigger: TTGGTCCAAGACATAGAGTCAGCAGATGTCTCCTCT...ACAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGACAGGATGCCCATGCTaGGCTTGGAGAACATGGCAA +
Preference number: 4 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQTGCPC*AWRTWQ
Trigger: TTGCCATGTTCTCCAAGCTCAGCATGGGCATCCTGT...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCATGTCGCCGTCGCTGCTaGCGCCGACCAATCAGAATG +
Preference number: 4 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPCRRRC*RRPIRM
Trigger: CATTCTGATTGGTCGGCGTCAGCAGCGACGGCGACA...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATGTCGCCGTCGCTGCTaGCGCCGACCAATCAGAATG +
Preference number: 4 (lower is better)
Translates to: RQRSGPKPIQAQREQILKCRRRC*RRPIRM
Trigger: CATTCTGATTGGTCGGCGTCAGCAGCGACGGCGACA...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGAAGCAGGAAGGGTGGTaGGAATCCACCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMKQEGW*ESTKAT
Trigger: AGTGGCTTTGGTGGATTCTCACCACCCTTCCTGCTT...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp AAACTCCCATCCCCGTCCTCACCTCGGGGAAAGCCACTTCTGCCTTCTCTCTTCAAGCAGGAAGGGTGGTaGGAATCCACCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: KLPSPSSPRGKPLLPSLFKQEGW*ESTKAT
Trigger: AGTGGCTTTGGTGGATTCTCACCACCCTTCCTGCTT...GAAGAGAGAAGGCAGAAGTGGCTTTCCCCGAGGTGAGGACGGGGATGGGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CGAATGTCTTGTGGTCGGAAGGCACAGACAGCAGAGATAGTAGCCCCCTCCCACGTTAGGGGGAAGCCCTaGTTTGCTGCAGAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: RMSCGRKAQTAEIVAPSHVRGKP*FAAESS
Trigger: ACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAAC...GTGGGAGGGGGCTACTATCTCTGCTGTCTGTGCCTTCCGACCACAAGACATTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR TCA 90 bp CCCTGTTCCAGGCAGGGCAAGTCCAGGGAGAGCTGCCACAGAGTGATGCCATCCTGCTCGTATATCCTATaGCTGTTCCCCTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PCSRQGKSRESCHRVMPSCSYIL*LFPFCC
Trigger: ACAACAGAAGGGGAACAGTCATAGGATATACGAGCA...GGATGGCATCACTCTGTGGCAGCTCTCCCTGGACTTGCCCTGCCTGGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GGACTGGAGAAACAAGAAGGCCTCCAGCAGCTACCAGTCCAGGGACTGGCCACAGCAAGGGTGTCACCCTaGGTAGTCACTGATTGCAAA +
Preference number: 4 (lower is better)
Translates to: GLEKQEGLQQLPVQGLATARVSP*VVTDCK
Trigger: TTTGCAATCAGTGACTACTCAGGGTGACACCCTTGC...TGTGGCCAGTCCCTGGACTGGTAGCTGCTGGAGGCCTTCTTGTTTCTCCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp TCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTATTCATTGACTGGAGCTTaGGGGGCTCAAGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SRGLMWLPAKGRKSSGSYSLTGA*GAQAPG
Trigger: CCCTGGTGCTTGAGCCCCTCAAGCTCCAGTCAATGA...ATAAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp TCATCCAAGCCCATACAGAGGGTGAGCAGCTCCCTCCTTCCACACCAAGCATGGATCCTCTGGTTCTTATaGCTGCCGCTGAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSKPIQRVSSSLLPHQAWILWFL*LPLRSS
Trigger: GGAGCTTCTCAGCGGCAGTCATAAGAACCAGAGGAT...CCATGCTTGGTGTGGAAGGAGGGAGCTGCTCACCCTCTGTATGGGCTTGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp TCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTATCCATCCAGTCAATCCTaGGGGGTCTCTCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SRGLMWLPAKGRKSSGSYPSSQS*GVSPLR
Trigger: TCTCAGGGGAGAGACCCCGCAGGATTGACTGGATGG...ATAAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAAGCACAGCAACATCCTaGAGGACACTGGAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RQRSGPKPIQAQREQILKSTATS*RTLEAR
Trigger: CCGGGCCTCCAGTGTCCTGCAGGATGTTGCTGTGCT...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCAAGCACAGCAACATCCTaGAGGACACTGGAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPSTATS*RTLEAR
Trigger: CCGGGCCTCCAGTGTCCTGCAGGATGTTGCTGTGCT...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAAGCTCCGATCCGCACTaGTCGGTGGAGGTGTCCATC +
Preference number: 4 (lower is better)
Translates to: RQRSGPKPIQAQREQILKSSDPH*SVEVSI
Trigger: GATGGACACCTCCACCGAGCAGTGCGGATCGGAGCT...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCATGGACCAACCCTCGGTaGTCCCCGGCATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPWTNPR*SPAWAT
Trigger: TGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCA...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp GGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGGAAGTCTCCGTAAAGAAGTGGACCAACCCTCGGTaGTCCCCGGCATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GTLMRSYESNAREVSVKKWTNPR*SPAWAT
Trigger: TGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCA...CTTCTTTACGGAGACTTCCCGAGCATTTGACTCATACGAGCGCATTAAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR GCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTACATGGCAAGACCACATaGGCAGCTGTAGCCACGGGA +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILHGKTT*AAVATG
Trigger: TCCCGTGGCTACAGCTGCGCATGTGGTCTTGCCATG...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTCATGGCAAGACCACATaGGCAGCTGTAGCCACGGGA +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTHGKTT*AAVATG
Trigger: TCCCGTGGCTACAGCTGCGCATGTGGTCTTGCCATG...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp AGATGCCATAAAAGATGGGAGTCCCTGCCCCAAGCTCAGGTCGAAGCACAGCAACATGGCAAGACCACATaGGCAGCTGTAGCCACGGGA +
Preference number: 4 (lower is better)
Translates to: RCHKRWESLPQAQVEAQQHGKTT*AAVATG
Trigger: TCCCGTGGCTACAGCTGCGCATGTGGTCTTGCCATG...TTGCTGTGCTTCGACCTGAGCTTGGGGCAGGGACTCCCATCTTTTATGGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAACATGGCAAGACCACATaGGCAGCTGTAGCCACGGGA +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKHGKTT*AAVATG
Trigger: TCCCGTGGCTACAGCTGCGCATGTGGTCTTGCCATG...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTATGCTACCACATGGGCTaGCCCACCCTCCTGACATTC +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILCYHMG*PTLLTF
Trigger: GAATGTCAGGAGGGTGGGGCAGCCCATGTGGTAGCA...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCAATCCACCAAAGCCACTaGCCCTCTTGGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPIHQSH*PSWPGP
Trigger: TGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGAT...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp CCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGTGCAACATGGGGATCATaGACTCCCCACAGATTCAGA +
Preference number: 4 (lower is better)
Translates to: PTTSRALPSGQAPTRKQSATWGS*TPHRFR
Trigger: TCTGAATCTGTGGGGAGTGCATGATCCCCATGTTGC...ACTTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGAGGCGTAAGCCACCATaGCCAGCCTACGAATGTCAT +
Preference number: 4 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVRRKPP*PAYECH
Trigger: ATGACATTCGTAGGCTGGGCATGGTGGCTTACGCCT...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CCCCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGGGGAAAGCCACTTCTaGCTTCTCTCTTCTTATGGA +
Preference number: 4 (lower is better)
Translates to: PQPPPGLFLPARLQPESKGESHF*LLSSYG
Trigger: TCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTCCCC...TTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CCGGGCGCCAACATAAAGTGTGTGGGAGGCAGGATCCACAAGGAGAACAGAGTAGGGATAAAGCGAAGATaGTGTCCCGGGCGCCAACAT +
Preference number: 4 (lower is better)
Translates to: PGANIKCVGGRIHKENRVGIKRR*CPGRQH
Trigger: ATGTTGGCGCCCGGGACACCATCTTCGCTTTATCCC...TACTCTGTTCTCCTTGTGGATCCTGCCTCCCACACACTTTATGTTGGCGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416236.5
CDS-3UTR CCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTTCTCCAGGTCTGGGCTaGGGCACATCATTGTCCACG +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTSPGLG*GTSLST
Trigger: CGTGGACAATGATGTGCCCCAGCCCAGACCTGGAGA...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp TCTGGAGACGGCCACAGTTGGTTGTATTCACTTGTGTCACCTCAGTACGGGAGCTCTCCAGGTCTGGGCTaGGGCACATCATTGTCCACG +
Preference number: 4 (lower is better)
Translates to: SGDGHSWLYSLVSPQYGSSPGLG*GTSLST
Trigger: CGTGGACAATGATGTGCCCCAGCCCAGACCTGGAGA...GCTCCCGTACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp TCATCCAAGCCCATACAGAGGGTGAGCAGCTCCCTCCTTCCACACCAAGCATGGATCAGCTGGAAACACTaGCCTGTCCATGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSKPIQRVSSSLLPHQAWISWKH*PVHEWV
Trigger: CACCCACTCATGGACAGGCCAGTGTTTCCAGCTGAT...CCATGCTTGGTGTGGAAGGAGGGAGCTGCTCACCCTCTGTATGGGCTTGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp TGGGCCCAAGATAGGGGGCCAGGGATGAAGGTTTACAGGAGTTCAGATGTTAGGGGGGTGGCCATCAGCTaGAAACACTGGCCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: WAQDRGPGMKVYRSSDVRGVAIS*KHWPVH
Trigger: ATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCC...CCTAACATCTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTATCTTGGGCCCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAGTGACCAGCAGGGGGTaGCCATCAGCTGGAAACACT +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILVTSRG*PSAGNT
Trigger: AGTGTTTCCAGCTGATGGCCACCCCCTGCTGGTCAC...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp AACGCTGAGCTGAGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCATCCTCTGTGGAGACGGCCACAGTTaGTTGTATTCACTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: NAELSSDPHCSVEVSILCGDGHS*LYSLVS
Trigger: TGACACAAGTGAATACAACCAACTGTGGCCGTCTCC...ACAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCGCACAGACTGGGTCCTaGGCCAGGATGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSAQTGS*ARMHSE
Trigger: CTCAGAGTGCATCCTGGCCCAGGACCCAGTCTGTGC...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CAAATACACATAGAGCTCAGCTTCCAGGGACTGGAGAAACAAGAAGGCCTCCAGGCTCCAGGCACAGACTaGGTCCTGGGCCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: QIHIELSFQGLEKQEGLQAPGTD*VLGQDA
Trigger: TGCATCCTGGCCCAGGACCCAGTCTGTGCCTGGAGC...CTGGAGGCCTTCTTGTTTCTCCAGTCCCTGGAAGCTGAGCTCTATGTGTATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GGTCTTGGCTGTAGCTTGTGGTCCCAGAAGGTGGAGCCCCCAGGTCCAGGCCCAAACTTCAAACACTACTaGACGTTCTCCAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: GLGCSLWSQKVEPPGPGPNFKHY*TFSRLF
Trigger: AAAGAGCCTGGAGAACGTCCAGTAGTGTTTGAAGTT...TGGGCCTGGACCTGGGGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CATTCTATACAAAGGGATCTCAGGCCACTAAGGTCAGACAGGTCTGAGGATTACAGCGCCCATGGCCCCTaGGGTCACCACCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: HSIQRDLRPLRSDRSEDYSAHGP*GHHHLQ
Trigger: CTGGAGGTGGTGGTGACCCCAGGGGCCATGGGCGCT...GTAATCCTCAGACCTGTCTGACCTTAGTGGCCTGAGATCCCTTTGTATAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAACTTGGCTGTAGCTTGTaGTCCCAGAAGGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKLGCSL*SQKVEP
Trigger: GGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAG...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp TGGGCCCAAGATAGGGGGCCAGGGATGAAGGTTTACAGGAGTTCAGATGTTAGGCTTGGCTGTAGCTTGTaGTCCCAGAAGGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: WAQDRGPGMKVYRSSDVRLGCSL*SQKVEP
Trigger: GGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAG...CCTAACATCTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTATCTTGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTAGCCACTGCCCCTCTTaGCCAGGGCCAGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITSHCPS*PGPAAT
Trigger: GGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCT...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp ACTGGGTCCTGGGCCAGGATGCACTCTGAGCAGCTCTGGAGACGGCCACAGTTGATGTTTCATCACATGTaGCTAGAGGAGCCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: TGSWARMHSEQLWRRPQLMFHHM*LEEPQL
Trigger: TAACTGGGGCTCCTCTAGCCACATGTGATGAAACAT...CAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGGACCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTACTCAGAGGCTGGGATaGTCTTCCAGGCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLTQRLG*SSRPSD
Trigger: GTCACTGGGCCTGGAAGACCATCCCAGCCTCTGAGT...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTACACACGGGCCACCCGTaGGACTTTAATGCGCTCGTA +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILHTGHP*DFNALV
Trigger: TACGAGCGCATTAAAGTCCCACGGGTGGCCCGTGTG...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp TGGGCCCAAGATAGGGGGCCAGGGATGAAGGTTTACAGGAGTTCAGATGTTAGGGCTGTGACATGGCAGTaGTGGCAGCCAGGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: WAQDRGPGMKVYRSSDVRAVTWQ*WQPGGK
Trigger: TTTACCCCCTGGCTGCCACCACTGCCATGTCACAGC...CCTAACATCTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTATCTTGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GGACTGGAGAAACAAGAAGGCCTCCAGCAGCTACCAGTCCAGGGACTGGCCACAAGACCCAGCAACCTTTaGCATCTCAGTGGTAACTCC +
Preference number: 4 (lower is better)
Translates to: GLEKQEGLQQLPVQGLATRPSNL*HLSGNS
Trigger: GGAGTTACCACTGAGATGCCAAAGGTTGCTGGGTCT...TGTGGCCAGTCCCTGGACTGGTAGCTGCTGGAGGCCTTCTTGTTTCTCCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGTCAGCTTCCAGGGACTaGAGAAACAAGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQSASRD*RNKKAS
Trigger: GGAGGCCTTCTTGTTTCTCCAGTCCCTGGAAGCTGA...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGTCAGCTTCCAGGGACTaGAGAAACAAGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVSASRD*RNKKAS
Trigger: GGAGGCCTTCTTGTTTCTCCAGTCCCTGGAAGCTGA...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGAGAGCCATGTGCGAGTaGTCAAGCAGGAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMRAMCE*SSRKRS
Trigger: AGACCTCTTCCTGCTTGACCACTCGCACATGGCTCT...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGCGAGTGGTCAAGCAGGAAGAGACTGGATCATTGACTaGAGCTTGAGGGGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: PGLSRRSLEPCASGQAGRDWIID*SLRGSS
Trigger: GCTTGAGCCCCTCAAGCTCCAGTCAATGATCCAGTC...TCTTCCTGCTTGACCACTCGCACATGGCTCTAGGCTTCTCCTGCTGAGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGAGCACCAGGGTCAGTTaGGATGCAGAGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVSTRVS*DAEGAG
Trigger: CCCTGCTCCCTCTGCATCCCAACTGACCCTGGTGCT...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp TCTGTCTGTGAGCCTCAGGAACCATCCAGTCAATCCTGCGGGGTCTCTCCCCTGTCTGAAGACAGAGATTaGAAGCGAGGTTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SVCEPQEPSSQSCGVSPLSEDRD*KRGSGH
Trigger: GTGCCCAGAACCTCGCTTCCAATCTCTGTCTTCAGA...CAGGGGAGAGACCCCGCAGGATTGACTGGATGGTTCCTGAGGCTCACAGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416236.5
CDS-3UTR TCA 90 bp ATCTGTCCGAATCCAGTCCTCGGCACGACCCACTGCTCTGGTGATAATTGGCTCCTACAGTTCTGTCTGTaGGCCTCAGGAACCATCCAG +
Preference number: 4 (lower is better)
Translates to: ICPNPVLGTTHCSGDNWLLQFCL*ASGTIQ
Trigger: CTGGATGGTTCCTGAGGCTCACAGACAGAACTGTAG...GAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAGGACTGGATTCGGACAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420077.5
ENST00000446927.5
ENST00000458114.5
CDS-3UTR TCA 90 bp AGGCTGGGGCGTTCAGCCAGGAAGGCAAGGTATCTGTCCGAATCCAGTCCTCGGCATGTTTTAGTTCTCTaGAGGGACCATTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: RLGRSARKARYLSESSPRHVLVL*RDHSAL
Trigger: CAGTGCTGAATGGTCCCTTCAGAGAACTAAAACATG...CCGAGGACTGGATTCGGACAGATACCTTGCCTTCCTGGCTGAACGCCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR TCA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGAGGCAGGGAGAGAGATaGGCCAAAGTGCCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVRQGER*AKVPEL
Trigger: AAGCTCCGGCACTTTGGCTCATCTCTCTCCCTGCCT...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCTCAAGAACGCTGAGCTaGGCTCCGATCCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSSRTLS*APIRTA
Trigger: AGCAGTGCGGATCGGAGCTCAGCTCAGCGTTCTTGA...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAGATCTTCAAGAACGCTaGGCTGAGCTCCGATCCGCA +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKDLQER*AELRSA
Trigger: TGCGGATCGGAGCTCAGCTCAGCGTTCTTGAAGATC...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTGATCTTCAAGAACGCTaGGCTGAGCTCCGATCCGCA +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTDLQER*AELRSA
Trigger: TGCGGATCGGAGCTCAGCTCAGCGTTCTTGAAGATC...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAGCCGACCAATCAGAATaGGAGTCAGGGATGCTGCGA +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILADQSE*ESGMLR
Trigger: TCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGC...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp GGACTGGAGAAACAAGAAGGCCTCCAGCAGCTACCAGTCCAGGGACTGGCCACATCATGGAAGGAAAACTaGGATGGGGAAGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: GLEKQEGLQQLPVQGLATSWKEN*DGEDLR
Trigger: CCTGAGATCTTCCCCATCTCAGTTTTCCTTCCATGA...TGTGGCCAGTCCCTGGACTGGTAGCTGCTGGAGGCCTTCTTGTTTCTCCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGAGCAGGAAGAGGTCTTaGCGTTTGGTAAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVSRKRS*RLVRAD
Trigger: GTCAGCTCTTACCAAACGTCAAGACCTCTTCCTGCT...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCATCATTGACTGGAGCTTaGGGGGCTCAAGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPSLTGA*GAQAPG
Trigger: CCCTGGTGCTTGAGCCCCTCAAGCTCCAGTCAATGA...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTGAAGGACTGGATCATTaGCTGGAGCTTGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLEGLDH*LELEGL
Trigger: GAGCCCCTCAAGCTCCAGTCAATGATCCAGTCCTTC...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CCCTGTTCCAGGCAGGGCAAGTCCAGGGAGAGCTGCCACAGAGTGATGCCATCCTTCTCATTTAATCCTTaGAGCAACCCTGAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: PCSRQGKSRESCHRVMPSFSFNP*SNPEVG
Trigger: ACCTACCTCAGGGTTGCTTCAAGGATTAAATGAGAA...GGATGGCATCACTCTGTGGCAGCTCTCCCTGGACTTGCCCTGCCTGGAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp TCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTATAGGCCTCAGCCTCCCTaGCTAGACAGGTCCAATCAT +
Preference number: 4 (lower is better)
Translates to: SRGLMWLPAKGRKSSGSYRPQPP*LDRSNH
Trigger: ATGATTGGACCTGTCTAGTCAGGGAGGCTGAGGCCT...ATAAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTGTATGTGTGAGGGACTaGGAACCGGGTGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTVCVRD*EPGETG
Trigger: TCCTGTCTCACCCGGTTCGCAGTCCCTCACACATAC...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp TGGGCCCAAGATAGGGGGCCAGGGATGAAGGTTTACAGGAGTTCAGATGTTAGGGTATGTGTGAGGGACTaGGAACCGGGTGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: WAQDRGPGMKVYRSSDVRVCVRD*EPGETG
Trigger: TCCTGTCTCACCCGGTTCGCAGTCCCTCACACATAC...CCTAACATCTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTATCTTGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp CAAATACACATAGAGCTCAGCTTCCAGGGACTGGAGAAACAAGAAGGCCTCCAGAACGTCGTCCATCTCTaGTGGAGGGTCTTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: QIHIELSFQGLEKQEGLQNVVHL*WRVFRP
Trigger: GGGCCGGAAGACCCTCCAGCAGAGATGGACGACGTT...CTGGAGGCCTTCTTGTTTCTCCAGTCCCTGGAAGCTGAGCTCTATGTGTATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCAGCACAGCAACATCCTaGAGGACACTGGAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QWSLRSSDHLYTSGHLPSSTATS*RTLEAR
Trigger: CCGGGCCTCCAGTGTCCTGCAGGATGTTGCTGTGCT...GCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCGGTCCTGGGCCAGGATaGACTCTGAGCAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QWSLRSSDHLYTSGHLPSGPGPG*TLSSSG
Trigger: TCCAGAGCTGCTCAGAGTGCATCCTGGCCCAGGACC...GCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGTGGACCAACCCTCGGTaGTCCCCGGCATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLWTNPR*SPAWAT
Trigger: TGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCA...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTTACCAAGCTGTAAGCTaGTACCACATGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTYQAVS*YHMGCP
Trigger: GGGGCAGCCCATGTGGTAGCAGCTTACAGCTTGGTA...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTCTCGGCACGACCCACTaGTCTGGTGATAATTGGCTC +
Preference number: 4 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLLGTTH*SGDNWL
Trigger: GAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAG...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp GCCGAATGTGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAATCGCAGAGACTCCATATTaGAACATGGGGATCATGCAC +
Preference number: 4 (lower is better)
Translates to: AECGLGLGKDQAGRVVRIAETPY*NMGIMH
Trigger: GTGCATGATCCCCATGTTGCAATATGGAGTCTCTGC...GATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGTTGGAAGCGAGGTTCTaGGCACCGAGCGGGGGACGC +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLLEARF*APSGGR
Trigger: GCGTCCCCCGCTCGGTGCCCAGAACCTCGCTTCCAA...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAGTCAGCCTCAGAGATTaGAAGCGAGGTTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILVSLRD*KRGSGH
Trigger: GTGCCCAGAACCTCGCTTCCAATCTCTGAGGCTGAC...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAGGGATAAAGCGAAGATaGTGTCCCGGGCGCCAACAT +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILGIKRR*CPGRQH
Trigger: ATGTTGGCGCCCGGGACACCATCTTCGCTTTATCCC...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CTTCATGTTGTTGGTGATGCACTCTCCAGGTCTGGGCTGGGGCACATCATTGTCGGGATAAAGCGAAGATaGTGTCCCGGGCGCCAACAT +
Preference number: 4 (lower is better)
Translates to: LHVVGDALSRSGLGHIIVGIKRR*CPGRQH
Trigger: ATGTTGGCGCCCGGGACACCATCTTCGCTTTATCCC...GACAATGATGTGCCCCAGCCCAGACCTGGAGAGTGCATCACCAACAACATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAGCCATGCTCAGGCCCTaGACAGAGCAGGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: RQRSGPKPIQAQREQILKAMLRP*TEQVSF
Trigger: AAAGCTGACCTGCTCTGTCCAGGGCCTGAGCATGGC...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCTGGCCTGTCCATGAGTaGGTGGTCCCGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSWPVHE*VVPDEG
Trigger: ACCTTCATCCGGGACCACCCACTCATGGACAGGCCA...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GCTCAGGCCCTGGACAGAGCAGGTCAGCTTTCAAAAACGTCGTCCATCTCTGCTATCAGCTGGAAACACTaGCCTGTCCATGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: AQALDRAGQLSKTSSISAISWKH*PVHEWV
Trigger: CACCCACTCATGGACAGGCCAGTGTTTCCAGCTGAT...AGCAGAGATGGACGACGTTTTTGAAAGCTGACCTGCTCTGTCCAGGGCCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp GAGCAGCTCTGGAGACGGCCACAGTTGGTTGTATTCACTTGTGTCACCTCAGTAGTGACCAGCAGGGGGTaGCCATCAGCTGGAAACACT +
Preference number: 4 (lower is better)
Translates to: EQLWRRPQLVVFTCVTSVVTSRG*PSAGNT
Trigger: AGTGTTTCCAGCTGATGGCCACCCCCTGCTGGTCAC...TACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGAGCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTATCCGCACTGCTCGGTaGAGGTGTCCATCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PPASQWSLRSSDHLYTSGIRTAR*RCPSSV
Trigger: GACAGAGGATGGACACCTCCACCGAGCAGTGCGGAT...ACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp AGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCCGGTGCTCCCCGGCATaGGCCACACACTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: SHFCLLSSYGGRNWSLRIRCSPA*ATHSSS
Trigger: GCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCG...GATACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAGCTGACTCTATGTCTTaGACCAACCCTCGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKADSMS*TNPRCS
Trigger: GGAGCACCGAGGGTTGGTCCAAGACATAGAGTCAGC...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCCTCGGAGCATCTCGCTaGCTGCCCCATACCAAGCTG +
Preference number: 4 (lower is better)
Translates to: QWSLRSSDHLYTSGHLPSLGASR*LPHTKL
Trigger: CAGCTTGGTATGGGGCAGCCAGCGAGATGCTCCGAG...GCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCCTTGGCTGTAGCTTGTaGTCCCAGAAGGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSLGCSL*SQKVEP
Trigger: GGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAG...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTCCCCCAGCATCTCAGTaGTCACTCCGTTCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTPPASQ*SLRSSD
Trigger: ATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGCTCTGGTGATAATTaGCTCCGTCCCCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMCSGDN*LRPQVV
Trigger: AACTACCTGGGGACGGAGCCAATTATCACCAGAGCA...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CGAATGTCTTGTGGTCGGAAGGCACAGACAGCAGAGATAGTAGCCCCCTCCCACCTCCATATTGCAACATaGGGATCATGCACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RMSCGRKAQTAEIVAPSHLHIAT*GSCTPH
Trigger: GTGGGGAGTGCATGATCCCCATGTTGCAATATGGAG...GTGGGAGGGGGCTACTATCTCTGCTGTCTGTGCCTTCCGACCACAAGACATTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGCTCCATATTGCAACATaGGGATCATGCACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMLHIAT*GSCTPH
Trigger: GTGGGGAGTGCATGATCCCCATGTTGCAATATGGAG...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AAACACTGGCCTGTCCATGAGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCGAAGGAAAACTGAGATaGGGAAGATCTCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KHWPVHEWVVPDEGEYAVEGKLR*GRSQGR
Trigger: TCTGCCCTGAGATCTTCCCCATCTCAGTTTTCCTTC...GACCGCGTACTCACCTTCATCCGGGACCACCCACTCATGGACAGGCCAGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp TCAGCCATCTTCAGGGTGGTCATCCCTCTCCCAAGAATTCCACATGAATCCAGGAAAGCAGCTGTGACATaGCAGTGGTGGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SAIFRVVIPLPRIPHESRKAAVT*QWWQPG
Trigger: CCCTGGCTGCCACCACTGCCATGTCACAGCTGCTTT...CCTGGATTCATGTGGAATTCTTGGGAGAGGGATGACCACCCTGAAGATGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGGATGCCATCCTAACTTaGCCTCAGTGCAGTAACCTC +
Preference number: 4 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVDAILT*PQCSNL
Trigger: GAGGTTACTGCACTGAGGCCAAGTTAGGATGGCATC...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GGACTGGAGAAACAAGAAGGCCTCCAGCAGCTACCAGTCCAGGGACTGGCCACAAATTTCAGCAGGCTTTaGGGTAAAGAGGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: GLEKQEGLQQLPVQGLATNFSRL*GKEAIP
Trigger: AGGGATGGCCTCTTTACCCCAAAGCCTGCTGAAATT...TGTGGCCAGTCCCTGGACTGGTAGCTGCTGGAGGCCTTCTTGTTTCTCCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGTCACGTCCTCGTGTTTTaGGCTGGCATAAAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: PTTSRALPSGQAPTRKQSHVLVF*AGIKFR
Trigger: TCTGAACTTTATGCCAGCCCAAAACACGAGGACGTG...ACTTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CAA 72 bp ACTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTaGAGGGGCTCAAGCACCAGGGATGAACGAGGCACA +
Preference number: 4 (lower is better)
Translates to: TSKGKDWIIDWS*RGSSTRDERGT
Trigger: TGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CAA 72 bp TGCACTCTGAGCAGCTCTGGAGACGGCCACAGTTGGTaGTATTCACTTGTGTCACCTCAGTACGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: CTLSSSGDGHSW*YSLVSPQYGSQ
Trigger: TTGGCTCCCGTACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
3UTR CAA 72 bp AGGATGCACTCTGAGCAGCTCTGGAGACGGCCACAGTaGGTTGTATTCACTTGTGTCACCTCAGTACGGGAG +
Preference number: 4 (lower is better)
Translates to: RMHSEQLWRRPQ*VVFTCVTSVRE
Trigger: CTCCCGTACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGGGACTGCGAACCGGGTaGGACAGGAGTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLGLRTG*DRSQPQ
Trigger: CTGAGGCTGACTCCTGTCTCACCCGGTTCGCAGTCC...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTCTACAGTTCTGTCTGTaGGCCTCAGGAACCATCCAG +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTLQFCL*ASGTIQ
Trigger: CTGGATGGTTCCTGAGGCTCACAGACAGAACTGTAG...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAATCATACTCTTTCCCTaGGAGGCTGGTCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILIILFP*EAGHPV
Trigger: CACAGGGTGACCAGCCTCTCAGGGAAAGAGTATGAT...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAGATCTTCAAGAACGCTaGGCTGAGCTCCGATCCGCA +
Preference number: 4 (lower is better)
Translates to: RQRSGPKPIQAQREQILKDLQER*AELRSA
Trigger: TGCGGATCGGAGCTCAGCTCAGCGTTCTTGAAGATC...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTAGCCATTACAGCTGCTaGCCGCTGAGCTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PPASQWSLRSSDHLYTSGSHYSC*PLSWLK
Trigger: TTTGAGCCAGCTCAGCGGTCAGCAGCTGTAATGGCT...ACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGTTTAATGCGCTCGTATaGGTCAAATGCTCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: APGMNEAHSQAKTRTQQEFNALV*VKCSGS
Trigger: ACTTCCCGAGCATTTGACTCATACGAGCGCATTAAA...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp TGGGCCCAAGATAGGGGGCCAGGGATGAAGGTTTACAGGAGTTCAGATGTTAGGGTTAGGGGGAAGCCCTaGTTTGCTGCAGAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: WAQDRGPGMKVYRSSDVRVRGKP*FAAESS
Trigger: ACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAAC...CCTAACATCTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTATCTTGGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp ACAAAGAAAAGGATGGGGTCATGTGTACTGCTGCCCTTCCCACCCGGAAGGTCAGTTAGGGGGAAGCCCTaGTTTGCTGCAGAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: TKKRMGSCVLLPFPPGRSVRGKP*FAAESS
Trigger: ACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAAC...TGACCTTCCGGGTGGGAAGGGCAGCAGTACACATGACCCCATCCTTTTCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTCCAAGGGGACTCTTTTaGGTAGTTCACAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLPRGLF*VVHRLL
Trigger: CAGCAGCCTGTGAACTACTCAAAAGAGTCCCCTTGG...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAGGCCACAACCTCAAGTaGGTGGGGTTGAAAGATAGG +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKGHNLK*VGLKDR
Trigger: CCTATCTTTCAACCCCACTCACTTGAGGTTGTGGCC...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp ACAAAGAAAAGGATGGGGTCATGTGTACTGCTGCCCTTCCCACCCGGAAGGTCATTCCATTGGAAGGAATaGCTGAGGCAGGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: TKKRMGSCVLLPFPPGRSFHWKE*LRQGRQ
Trigger: CTGCCTACCCTGCCTCAGTCATTCCTTCCAATGGAA...TGACCTTCCGGGTGGGAAGGGCAGCAGTACACATGACCCCATCCTTTTCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp TGGGCCCAAGATAGGGGGCCAGGGATGAAGGTTTACAGGAGTTCAGATGTTAGGATCCTCTGGTTCTTATaGCTGCCGCTGAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: WAQDRGPGMKVYRSSDVRILWFL*LPLRSS
Trigger: GGAGCTTCTCAGCGGCAGTCATAAGAACCAGAGGAT...CCTAACATCTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTATCTTGGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp TGGGCCCAAGATAGGGGGCCAGGGATGAAGGTTTACAGGAGTTCAGATGTTAGGCCCAAGAATTCCACATaGATCCAGGGGGCTCATGTG +
Preference number: 4 (lower is better)
Translates to: WAQDRGPGMKVYRSSDVRPKNST*IQGAHV
Trigger: CACATGAGCCCCCTGGATTCATGTGGAATTCTTGGG...CCTAACATCTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTATCTTGGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp AGCGAAGATGGTGTCCCGGGCGCCAACATAAAGTGTGTGGGAGGCAGGATCCACGCAGAGTCTAAAATGTaGATCGCCCCAATGATCACT +
Preference number: 4 (lower is better)
Translates to: SEDGVPGANIKCVGGRIHAESKM*IAPMIT
Trigger: AGTGATCATTGGGGCGATTCACATTTTAGACTCTGC...GTGGATCCTGCCTCCCACACACTTTATGTTGGCGCCCGGGACACCATCTTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416236.5
CDS-3UTR GCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCGTATGTGTGAGGGACTaGGAACCGGGTGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSVCVRD*EPGETG
Trigger: TCCTGTCTCACCCGGTTCGCAGTCCCTCACACATAC...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAAAAGATGGGAGTCCCTaGCCCAAGCTCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: RQRSGPKPIQAQREQILKKDGSP*PKLRSK
Trigger: CTTCGACCTGAGCTTGGGGCAGGGACTCCCATCTTT...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp AGCCAGGAAGGCAAGGTATCTGTCCGAATCCAGTCCTCGGCACGACCCACTGCTCAGGCAGTCCTCTGTTaGAGTCATGTTTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SQEGKVSVRIQSSARPTAQAVLC*SHVLVL
Trigger: GAGAACTAAAACATGACTGCAACAGAGGACTGCCTG...AGCAGTGGGTCGTGCCGAGGACTGGATTCGGACAGATACCTTGCCTTCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCTGCTACCACATGGGCTaGCCCACCCTCCTGACATTC +
Preference number: 4 (lower is better)
Translates to: QWSLRSSDHLYTSGHLPSCYHMG*PTLLTF
Trigger: GAATGTCAGGAGGGTGGGGCAGCCCATGTGGTAGCA...GCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp TGGGGCACATCATTGTCCACGACAGGCAGTCCTCTGTTGCAGTCATGTTTTAGTTGCTACCACATGGGCTaGCCCACCCTCCTGACATTC +
Preference number: 4 (lower is better)
Translates to: WGTSLSTTGSPLLQSCFSCYHMG*PTLLTF
Trigger: GAATGTCAGGAGGGTGGGGCAGCCCATGTGGTAGCA...ACTAAAACATGACTGCAACAGAGGACTGCCTGTCGTGGACAATGATGTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCAGAGCATCTCGCTGGCTaGCCCATACCAAGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPEHLAG*PIPSCK
Trigger: CTTACAGCTTGGTATGGGGCAGCCAGCGAGATGCTC...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGAATGAGAGTCAGGGATaGTGCGAGAATCCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQNESQG*CENPQE
Trigger: TTCTTGGGGATTCTCGCAGCATCCCTGACTCTCATT...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAATCCACCAAAGCCACTaGCCCTCTTGGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPIHQSH*PSWPGP
Trigger: TGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGAT...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp CATTCTATACAAAGGGATCTCAGGCCACTAAGGTCAGACAGGTCTGAGGATTACGCTCAAGGCCACGGCTaGGACAAAGGCTGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: HSIQRDLRPLRSDRSEDYAQGHG*DKGWGV
Trigger: AACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGC...GTAATCCTCAGACCTGTCTGACCTTAGTGGCCTGAGATCCCTTTGTATAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCGGCCCAGTCATTCATaGACATGTGGCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: PPASQWSLRSSDHLYTSGRPSHS*TCGQVS
Trigger: AGAGACCTGGCCACATGTGCATGAATGACTGGGCCG...ACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAGGCGTAAGCCACCATaGCCAGCCTACGAATGTCAT +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTRRKPP*PAYECH
Trigger: ATGACATTCGTAGGCTGGGCATGGTGGCTTACGCCT...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGTCTCACAATCCTCTATaGCACAGCTGTCTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVSHNPL*HSCLQQ
Trigger: TTGCTGGAGACAGCTGTGGCATAGAGGATTGTGAGA...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp TCATCCAAGCCCATACAGAGGGTGAGCAGCTCCCTCCTTCCACACCAAGCATGGTCTCACAATCCTCTATaGCACAGCTGTCTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: SSKPIQRVSSSLLPHQAWSHNPL*HSCLQQ
Trigger: TTGCTGGAGACAGCTGTGGCATAGAGGATTGTGAGA...CCATGCTTGGTGTGGAAGGAGGGAGCTGCTCACCCTCTGTATGGGCTTGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CAACATAAAGTGTGTGGGAGGCAGGATCCACAAGGAGAACAGAGTAATTGTATGTTGGAAGCGAGGTTCTaGGCACCGAGCGGGGGACGC +
Preference number: 4 (lower is better)
Translates to: QHKVCGRQDPQGEQSNCMLEARF*APSGGR
Trigger: GCGTCCCCCGCTCGGTGCCCAGAACCTCGCTTCCAA...CATACAATTACTCTGTTCTCCTTGTGGATCCTGCCTCCCACACACTTTATGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416236.5
CDS-3UTR CCA 90 bp TCAGCCATCTTCAGGGTGGTCATCCCTCTCCCAAGAATTCCACATGAATCCAGGGTCAGCCTCAGAGATTaGAAGCGAGGTTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SAIFRVVIPLPRIPHESRVSLRD*KRGSGH
Trigger: GTGCCCAGAACCTCGCTTCCAATCTCTGAGGCTGAC...CCTGGATTCATGTGGAATTCTTGGGAGAGGGATGACCACCCTGAAGATGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GAGCCAACCAGGAGCCAGCTGTGGTACAATTTCATGTTCTCAACTGGCTGTGGCTGTCCGAATGTCTTGTaGTCGGAAGGCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: EPTRSQLWYNFMFSTGCGCPNVL*SEGTDS
Trigger: GCTGTCTGTGCCTTCCGACCACAAGACATTCGGACA...GCCACAGCCAGTTGAGAACATGAAATTGTACCACAGCTGGCTCCTGGTTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp AGCTGTAGCCACGGGAACTTCAAACACTACTGGACGTTCTCCAGGCTCTTTAGGTGCACTCTCCAGGTCTaGGCTGGGGCACATCATTGT +
Preference number: 4 (lower is better)
Translates to: SCSHGNFKHYWTFSRLFRCTLQV*AGAHHC
Trigger: ACAATGATGTGCCCCAGCCCAGACCTGGAGAGTGCA...CCTAAAGAGCCTGGAGAACGTCCAGTAGTGTTTGAAGTTCCCGTGGCTACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCTGCACTCTCCAGGTCTaGGCTGGGGCACATCATTGT +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSCTLQV*AGAHHC
Trigger: ACAATGATGTGCCCCAGCCCAGACCTGGAGAGTGCA...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCCTGTCCATGAGTGGGTaGTCCCGGATGAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSLSMSG*SRMKVS
Trigger: ACTCACCTTCATCCGGGACCACCCACTCATGGACAG...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp AAACTCCCATCCCCGTCCTCACCTCGGGGAAAGCCACTTCTGCCTTCTCTCTTCGGAGACGGCCACAGTTaGTTGTATTCACTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: KLPSPSSPRGKPLLPSLFGDGHS*LYSLVS
Trigger: TGACACAAGTGAATACAACCAACTGTGGCCGTCTCC...GAAGAGAGAAGGCAGAAGTGGCTTTCCCCGAGGTGAGGACGGGGATGGGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGGGAGACGGCCACAGTTaGTTGTATTCACTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMGDGHS*LYSLVS
Trigger: TGACACAAGTGAATACAACCAACTGTGGCCGTCTCC...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp TCAGCCATCTTCAGGGTGGTCATCCCTCTCCCAAGAATTCCACATGAATCCAGGCACTCTGAGCAGCTCTaGAGACGGCCACAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: SAIFRVVIPLPRIPHESRHSEQL*RRPQLV
Trigger: AACCAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTG...CCTGGATTCATGTGGAATTCTTGGGAGAGGGATGACCACCCTGAAGATGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AAAGTAGAGCAGAAAACTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTTGCGGTGCTCCCCGGCATaGGCCACACACTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: KVEQKTSKGKDWIIDWSLRCSPA*ATHSSS
Trigger: GCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCG...CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAGTTTTCTGCTCTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCAGCTGACTCTATGTCTTaGACCAACCCTCGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPADSMS*TNPRCS
Trigger: GGAGCACCGAGGGTTGGTCCAAGACATAGAGTCAGC...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GGAGCCCCAGTTAGCCGAATGTGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGAACTTCAAACACTACTaGACGTTCTCCAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: GAPVSRMWAGLGQGSSRKNFKHY*TFSRLF
Trigger: AAAGAGCCTGGAGAACGTCCAGTAGTGTTTGAAGTT...CTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGGGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGTCACTCCACTGGGCTaGTGCCACACACAGGATGCC +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPVTPLG*CHTQDA
Trigger: GGCATCCTGTGTGTGGCACCAGCCCAGTGGAGTGAC...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp ATGTTCTCAACTGGCTGTGGCTCTGGGAATAAGGCCAGATCTTCAAGAACGCTGCTTGGCTGTAGCTTGTaGTCCCAGAAGGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: MFSTGCGSGNKARSSRTLLGCSL*SQKVEP
Trigger: GGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAG...CAGCGTTCTTGAAGATCTGGCCTTATTCCCAGAGCCACAGCCAGTTGAGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGATGTTTCATCACATGTaGCTAGAGGAGCCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: APGMNEAHSQAKTRTQQEMFHHM*LEEPQL
Trigger: TAACTGGGGCTCCTCTAGCCACATGTGATGAAACAT...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGTTGCCCAGCTCTAGATaGATGTTTCATCACATGTGG +
Preference number: 4 (lower is better)
Translates to: APGMNEAHSQAKTRTQQELPSSR*MFHHMW
Trigger: CCACATGTGATGAAACATCCATCTAGAGCTGGGCAA...CTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCACTCAGAGGCTGGGATaGTCTTCCAGGCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: QWSLRSSDHLYTSGHLPSTQRLG*SSRPSD
Trigger: GTCACTGGGCCTGGAAGACCATCCCAGCCTCTGAGT...GCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAGGAGGTGAGAGGCATTaGCAATGGCGAGAATCTGGA +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKGGERH*QWRESG
Trigger: TCCAGATTCTCGCCATTGCCAATGCCTCTCACCTCC...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357877.7
CDS-3UTR CCA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGCACGTCCTCGTGTTTTaGGCTGGCATAAAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQHVLVF*AGIKFR
Trigger: TCTGAACTTTATGCCAGCCCAAAACACGAGGACGTG...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CAA 72 bp CAGAGGGAGCAGGGAAAACGTGGGCAAGAGTGCTTATaGTGGTTTCCATTGGAAGGAATGACTGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QREQGKRGQECL*WFPLEGMTEAG
Trigger: CCCTGCCTCAGTCATTCCTTCCAATGGAAACCACAATAAGCACTCTTGCCCACGTTTTCCCTGCTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGCTTCATGTTGTTGGTaGTGCACTCTCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVASCCW*CTLQVW
Trigger: CCAGACCTGGAGAGTGCATCACCAACAACATGAAGC...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCACAGGATGCCCATGCTaGGCTTGGAGAACATGGCAA +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSTGCPC*AWRTWQ
Trigger: TTGCCATGTTCTCCAAGCTCAGCATGGGCATCCTGT...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGCAGGAAGGGTGGTaGGAATCCACCAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSKQEGW*ESTKAT
Trigger: AGTGGCTTTGGTGGATTCTCACCACCCTTCCTGCTT...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp TATGTCTTGGACCAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGATCTGGACAAAATTGTaGCATTCGTCCTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: YVLDQPSVLPGMGHTLIQIWTKL*HSSSFL
Trigger: CAAGAAAGAGGACGAATGTCACAATTTTGTCCAGAT...CTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCAAGACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420077.5
CDS-3UTR TCA 90 bp AAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGCGAGTGGTCAAGCAGGTGCTCGTATATCCTATaGCTGTTCCCCTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KTRTQQEKPRAMCEWSSRCSYIL*LFPFCC
Trigger: ACAACAGAAGGGGAACAGTCATAGGATATACGAGCA...CCTGCTTGACCACTCGCACATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTTTCCATTGGAAGGAATaGCTGAGGCAGGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: PPASQWSLRSSDHLYTSGFHWKE*LRQGRQ
Trigger: CTGCCTACCCTGCCTCAGTCATTCCTTCCAATGGAA...ACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCGCAAGCTACGGCCTCTaGTCAGGGCCCCGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVASYGL*SGPRGY
Trigger: GTAGCCCCGGGGCCCTGAGCAGAGGCCGTAGCTTGC...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTCCATCCAGTCAATCCTaGGGGGTCTCTCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVIPSSQS*GVSPLR
Trigger: TCTCAGGGGAGAGACCCCGCAGGATTGACTGGATGG...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAGAGAGTCAGGGATGCTaGGAGAATCCCCAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILESQGC*ENPQEE
Trigger: TTCTTCTTGGGGATTCTCGCAGCATCCCTGACTCTC...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCATGGGGTCATGTGTACTaGTGCCCTTCCCACCCGGAA +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPWGHVY*CPSHPE
Trigger: TTCCGGGTGGGAAGGGCAGCAGTACACATGACCCCA...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp GGACTGGAGAAACAAGAAGGCCTCCAGCAGCTACCAGTCCAGGGACTGGCCACAAAACGTGGGCAAGAGTaGTTATTGTGGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: GLEKQEGLQQLPVQGLATKRGQE*LLWFPL
Trigger: CAATGGAAACCACAATAAGCACTCTTGCCCACGTTT...TGTGGCCAGTCCCTGGACTGGTAGCTGCTGGAGGCCTTCTTGTTTCTCCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCGGGATAAAGCGAAGATaGTGTCCCGGGCGCCAACAT +
Preference number: 4 (lower is better)
Translates to: QWSLRSSDHLYTSGHLPSGIKRR*CPGRQH
Trigger: ATGTTGGCGCCCGGGACACCATCTTCGCTTTATCCC...GCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTAGATGCCATAAAAGATaGGAGTCCCTGCCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLRCHKR*ESLPQA
Trigger: AGCTTGGGGCAGGGACTCCCATCTTTTATGGCATCT...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CTTCATGTTGTTGGTGATGCACTCTCCAGGTCTGGGCTGGGGCACATCATTGTCAGATGCCATAAAAGATaGGAGTCCCTGCCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LHVVGDALSRSGLGHIIVRCHKR*ESLPQA
Trigger: AGCTTGGGGCAGGGACTCCCATCTTTTATGGCATCT...GACAATGATGTGCCCCAGCCCAGACCTGGAGAGTGCATCACCAACAACATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTTCTCCAGGTCTGGGCTaGGGCACATCATTGTCCACG +
Preference number: 4 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVISPGLG*GTSLST
Trigger: CGTGGACAATGATGTGCCCCAGCCCAGACCTGGAGA...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTGTGACCAGCAGGGGGTaGCCATCAGCTGGAAACACT +
Preference number: 4 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVIVTSRG*PSAGNT
Trigger: AGTGTTTCCAGCTGATGGCCACCCCCTGCTGGTCAC...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGTAACTTCAAACACTACTaGACGTTCTCCAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: PTTSRALPSGQAPTRKQSNFKHY*TFSRLF
Trigger: AAAGAGCCTGGAGAACGTCCAGTAGTGTTTGAAGTT...ACTTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTCTCGGAGCATCTCGCTaGCTGCCCCATACCAAGCTG +
Preference number: 4 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISLGASR*LPHTKL
Trigger: CAGCTTGGTATGGGGCAGCCAGCGAGATGCTCCGAG...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTCCAGTTAGCCGAATGTaGGCTGGGCTTGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVIPVSRM*AGLGQG
Trigger: TCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGG...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGCGAGTGGTCAAGCAGGGAGAGGCATTGGCAATaGCGAGAATCTGGACAAAAT +
Preference number: 4 (lower is better)
Translates to: KTRTQQEKPRAMCEWSSRERHWQ*RESGQN
Trigger: ATTTTGTCCAGATTCTCGCCATTGCCAATGCCTCTC...CCTGCTTGACCACTCGCACATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357877.7
CDS-3UTR CCA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGTTTAGAGTAAGGTTGTaGGGCAATGGGGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVFRVRL*GNGERG
Trigger: GCCCCTCTCCCCATTGCCCCACAACCTTACTCTAAA...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGTGGGAGCCAAGGAAATaGGGTACAGCCTACACTCCA +
Preference number: 4 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVWEPRK*GTAYTP
Trigger: TGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCCA...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATGGGAGCCAAGGAAATaGGGTACAGCCTACACTCCA +
Preference number: 4 (lower is better)
Translates to: RQRSGPKPIQAQREQILKWEPRK*GTAYTP
Trigger: TGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCCA...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAGAGCCATGTGCGAGTaGTCAAGCAGGAAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSRAMCE*SSRKRS
Trigger: AGACCTCTTCCTGCTTGACCACTCGCACATGGCTCT...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAATCTGAGGAAGTGGCATaGAAGCAGGGCATAGGTCTA +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKSEEVA*KQGIGL
Trigger: TAGACCTATGCCCTGCTTCCATGCCACTTCCTCAGA...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTTCTGAGGAAGTGGCATaGAAGCAGGGCATAGGTCTA +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTSEEVA*KQGIGL
Trigger: TAGACCTATGCCCTGCTTCCATGCCACTTCCTCAGA...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTAGGCAGGGAGAGAGATaGGCCAAAGTGCCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRRQGER*AKVPEL
Trigger: AAGCTCCGGCACTTTGGCTCATCTCTCTCCCTGCCT...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGTCAAGAACGCTGAGCTaGGCTCCGATCCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLSRTLS*APIRTA
Trigger: AGCAGTGCGGATCGGAGCTCAGCTCAGCGTTCTTGA...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCACAGGATGCCCATGCTaGGCTTGGAGAACATGGCAA +
Preference number: 4 (lower is better)
Translates to: QWSLRSSDHLYTSGHLPSTGCPC*AWRTWQ
Trigger: TTGCCATGTTCTCCAAGCTCAGCATGGGCATCCTGT...GCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCCGACCAATCAGAATaGGAGTCAGGGATGCTGCGA +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPADQSE*ESGMLR
Trigger: TCGCAGCATCCCTGACTCTCATTCTGATTGGTCGGC...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTCGAAGGTGCCACAAGTaGGGAGGTGAGAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITRRCHK*GGERHW
Trigger: CCAATGCCTCTCACCTCCTCACTTGTGGCACCTTCG...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357877.7
CDS-3UTR TCA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTTCATGGAAGGAAAACTaGGATGGGGAAGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLSWKEN*DGEDLR
Trigger: CCTGAGATCTTCCCCATCTCAGTTTTCCTTCCATGA...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTTCTCATTTAATCCTTaGAGCAACCCTGAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMFSFNP*SNPEVG
Trigger: ACCTACCTCAGGGTTGCTTCAAGGATTAAATGAGAA...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CCCCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAATGACTGTCCTTTACTaGGTGAGGCTTAATATGATT +
Preference number: 4 (lower is better)
Translates to: PQPPPGLFLPARLQPESKMTVLY*VRLNMI
Trigger: AATCATATTAAGCCTCACTCAGTAAAGGACAGTCAT...TTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTCCATCCAGTCAATCCTaGGGGGTCTCTCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITPSSQS*GVSPLR
Trigger: TCTCAGGGGAGAGACCCCGCAGGATTGACTGGATGG...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp AAAGTAGAGCAGAAAACTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTTGAACGTCGTCCATCTCTaGTGGAGGGTCTTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: KVEQKTSKGKDWIIDWSLNVVHL*WRVFRP
Trigger: GGGCCGGAAGACCCTCCAGCAGAGATGGACGACGTT...CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAGTTTTCTGCTCTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAAAAGATGGGAGTCCCTaGCCCAAGCTCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPKDGSP*PKLRSK
Trigger: CTTCGACCTGAGCTTGGGGCAGGGACTCCCATCTTT...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCAGAGAGTCAGGGATGCTaGGAGAATCCCCAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPESQGC*ENPQEE
Trigger: TTCTTCTTGGGGATTCTCGCAGCATCCCTGACTCTC...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAATGAGAGTCAGGGATaGTGCGAGAATCCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTNESQG*CENPQE
Trigger: TTCTTGGGGATTCTCGCAGCATCCCTGACTCTCATT...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCACTCGGCACGACCCACTaGTCTGGTGATAATTGGCTC +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPLGTTH*SGDNWL
Trigger: GAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAG...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp GAGCAGCTCTGGAGACGGCCACAGTTGGTTGTATTCACTTGTGTCACCTCAGTAGCAACATGGGGATCATaGACTCCCCACAGATTCAGA +
Preference number: 4 (lower is better)
Translates to: EQLWRRPQLVVFTCVTSVATWGS*TPHRFR
Trigger: TCTGAATCTGTGGGGAGTGCATGATCCCCATGTTGC...TACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGAGCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR GCA 90 bp TCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTATGCAGAGACTCCATATTaGAACATGGGGATCATGCAC +
Preference number: 4 (lower is better)
Translates to: SRGLMWLPAKGRKSSGSYAETPY*NMGIMH
Trigger: GTGCATGATCCCCATGTTGCAATATGGAGTCTCTGC...ATAAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGGGTCATGTGTACTGCTaGCCTTCCCACCCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLGHVYC*PSHPEG
Trigger: ACCTTCCGGGTGGGAAGGGCAGCAGTACACATGACC...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCCTAACTTGGCCTCAGTaGAGTAACCTCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QWSLRSSDHLYTSGHLPSLTWPQ*SNLRAV
Trigger: CACTGCCCTGAGGTTACTGCACTGAGGCCAAGTTAG...GCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCTGTCCGAATGTCTTGTaGTCGGAAGGCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: QWSLRSSDHLYTSGHLPSCPNVL*SEGTDS
Trigger: GCTGTCTGTGCCTTCCGACCACAAGACATTCGGACA...GCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTTCTCCAGGTCTGGGCTaGGGCACATCATTGTCCACG +
Preference number: 4 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISSPGLG*GTSLST
Trigger: CGTGGACAATGATGTGCCCCAGCCCAGACCTGGAGA...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCACTGTCCATGAGTGGGTaGTCCCGGATGAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPLSMSG*SRMKVS
Trigger: ACTCACCTTCATCCGGGACCACCCACTCATGGACAG...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGGGGGTGGCCATCAGCTaGAAACACTGGCCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLGVAIS*KHWPVH
Trigger: ATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCC...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGGTGACCAGCAGGGGGTaGCCATCAGCTGGAAACACT +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLVTSRG*PSAGNT
Trigger: AGTGTTTCCAGCTGATGGCCACCCCCTGCTGGTCAC...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGATCCGCACTGCTCGGTaGAGGTGTCCATCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLIRTAR*RCPSSV
Trigger: GACAGAGGATGGACACCTCCACCGAGCAGTGCGGAT...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CATTCTATACAAAGGGATCTCAGGCCACTAAGGTCAGACAGGTCTGAGGATTACATCCGCACTGCTCGGTaGAGGTGTCCATCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HSIQRDLRPLRSDRSEDYIRTAR*RCPSSV
Trigger: GACAGAGGATGGACACCTCCACCGAGCAGTGCGGAT...GTAATCCTCAGACCTGTCTGACCTTAGTGGCCTGAGATCCCTTTGTATAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCACACTCTGAGCAGCTCTaGAGACGGCCACAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPHSEQL*RRPQLV
Trigger: AACCAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTG...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCTTGGCTGTAGCTTGTaGTCCCAGAAGGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLLGCSL*SQKVEP
Trigger: GGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAG...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTCCAGTTAGCCGAATGTaGGCTGGGCTTGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITPVSRM*AGLGQG
Trigger: TCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGG...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CACACACAGGATGCCCATGCTGAGCTTGGAGAACATGGCAAGACCACATGCGCATTGCCCAGCTCTAGATaGATGTTTCATCACATGTGG +
Preference number: 4 (lower is better)
Translates to: HTQDAHAELGEHGKTTCALPSSR*MFHHMW
Trigger: CCACATGTGATGAAACATCCATCTAGAGCTGGGCAA...TGCGCATGTGGTCTTGCCATGTTCTCCAAGCTCAGCATGGGCATCCTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTCCCCCAGCATCTCAGTaGTCACTCCGTTCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVIPPASQ*SLRSSD
Trigger: ATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTACTCAGAGGCTGGGATaGTCTTCCAGGCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITTQRLG*SSRPSD
Trigger: GTCACTGGGCCTGGAAGACCATCCCAGCCTCTGAGT...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTAATCAGGCAAAGGTCTaGCCCCAAGCCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITNQAKV*PQAHPG
Trigger: GCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp AGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAATCAGGCAAAGGTCTaGCCCCAAGCCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: SHFCLLSSYGGRNWSLRINQAKV*PQAHPG
Trigger: GCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT...GATACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGAGTCTTTCAACCTGCTaGAACCTGGACACATCAATA +
Preference number: 4 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQSLSTC*NLDTSI
Trigger: TATTGATGTGTCCAGGTTCCAGCAGGTTGAAAGACT...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357877.7
CDS-3UTR CCA 90 bp CCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCTCCATATTGCAACATaGGGATCATGCACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PPASQWSLRSSDHLYTSGLHIAT*GSCTPH
Trigger: GTGGGGAGTGCATGATCCCCATGTTGCAATATGGAG...ACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAACGCCATTCCCTCTATaGCTACAGGGTCTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILTPFPL*LQGLKF
Trigger: GAACTTTAGACCCTGTAGCCATAGAGGGAATGGCGT...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGAAACAAAGAAAAGGATaGGGTCATGTGTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVKQRKG*GHVYCC
Trigger: GCAGCAGTACACATGACCCCATCCTTTTCTTTGTTT...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTTCAAAGGGGAAGGACTaGATCATTGACTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLSKGKD*IIDWSL
Trigger: CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGA...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp TCAGCCATCTTCAGGGTGGTCATCCCTCTCCCAAGAATTCCACATGAATCCAGGCTTCCACACCAAGCATaGGGACCCTTTCTCACAATC +
Preference number: 4 (lower is better)
Translates to: SAIFRVVIPLPRIPHESRLPHQA*GPFLTI
Trigger: GATTGTGAGAAAGGGTCCCCATGCTTGGTGTGGAAG...CCTGGATTCATGTGGAATTCTTGGGAGAGGGATGACCACCCTGAAGATGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAACATGTTTTAGTTCTCTaGAGGGACCATTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKHVLVL*RDHSAL
Trigger: CAGTGCTGAATGGTCCCTTCAGAGAACTAAAACATG...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTCATGTTTTAGTTCTCTaGAGGGACCATTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTHVLVL*RDHSAL
Trigger: CAGTGCTGAATGGTCCCTTCAGAGAACTAAAACATG...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTGCTTCATGTTGTTGGTaGTGCACTCTCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVIASCCW*CTLQVW
Trigger: CCAGACCTGGAGAGTGCATCACCAACAACATGAAGC...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGAGAGGAGACATCTGCTaGCTCTATGTCTTGGACCAA +
Preference number: 4 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVRGDIC*LYVLDQ
Trigger: TTGGTCCAAGACATAGAGTCAGCAGATGTCTCCTCT...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CTCAGTACGGGAGCCAACCAGGAGCCAGCTGTGGTACAATTTCATGTTCTCAACAGAGGAGACATCTGCTaGCTCTATGTCTTGGACCAA +
Preference number: 4 (lower is better)
Translates to: LSTGANQEPAVVQFHVLNRGDIC*LYVLDQ
Trigger: TTGGTCCAAGACATAGAGTCAGCAGATGTCTCCTCT...GTTGAGAACATGAAATTGTACCACAGCTGGCTCCTGGTTGGCTCCCGTACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR TCA 90 bp AGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAGAGCTGCCACAGAGTaGTGCCATCCTAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: SHFCLLSSYGGRNWSLRIRAATE*CHPNLA
Trigger: GGCCAAGTTAGGATGGCATCACTCTGTGGCAGCTCT...GATACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp AGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCGAAGGACTGGATCATTaGCTGGAGCTTGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SHFCLLSSYGGRNWSLRIEGLDH*LELEGL
Trigger: GAGCCCCTCAAGCTCCAGTCAATGATCCAGTCCTTC...GATACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTGTGCCTGGCCCTAGGTaGTTAGAGCAGGCAGATAGT +
Preference number: 4 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISVPGPR*LEQADS
Trigger: ACTATCTGCCTGCTCTAATCACCTAGGGCCAGGCAC...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp GCCAACATAAAGTGTGTGGGAGGCAGGATCCACAAGGAGAACAGAGTAATTGTAGTATGTGTGAGGGACTaGGAACCGGGTGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: ANIKCVGGRIHKENRVIVVCVRD*EPGETG
Trigger: TCCTGTCTCACCCGGTTCGCAGTCCCTCACACATAC...TACAATTACTCTGTTCTCCTTGTGGATCCTGCCTCCCACACACTTTATGTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416236.5
CDS-3UTR GCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTCAGGCAGTCCTCTGTTaGAGTCATGTTTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTQAVLC*SHVLVL
Trigger: GAGAACTAAAACATGACTGCAACAGAGGACTGCCTG...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp CATTCTATACAAAGGGATCTCAGGCCACTAAGGTCAGACAGGTCTGAGGATTACTACCAAGCTGTAAGCTaGTACCACATGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: HSIQRDLRPLRSDRSEDYYQAVS*YHMGCP
Trigger: GGGGCAGCCCATGTGGTAGCAGCTTACAGCTTGGTA...GTAATCCTCAGACCTGTCTGACCTTAGTGGCCTGAGATCCCTTTGTATAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTTACCAAGCTGTAAGCTaGTACCACATGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITYQAVS*YHMGCP
Trigger: GGGGCAGCCCATGTGGTAGCAGCTTACAGCTTGGTA...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGGAGCATCTCGCTGGCTaGCCCATACCAAGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLEHLAG*PIPSCK
Trigger: CTTACAGCTTGGTATGGGGCAGCCAGCGAGATGCTC...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp CCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTAATGAGAGTCAGGGATaGTGCGAGAATCCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PPASQWSLRSSDHLYTSGNESQG*CENPQE
Trigger: TTCTTGGGGATTCTCGCAGCATCCCTGACTCTCATT...ACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAGCAGAGACTCCATATTaGAACATGGGGATCATGCAC +
Preference number: 4 (lower is better)
Translates to: RQRSGPKPIQAQREQILKAETPY*NMGIMH
Trigger: GTGCATGATCCCCATGTTGCAATATGGAGTCTCTGC...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCGGCCCAGTCATTCATaGACATGTGGCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLRPSHS*TCGQVS
Trigger: AGAGACCTGGCCACATGTGCATGAATGACTGGGCCG...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTCAGGGTCTAAAGTTCTaGAGGCAACGCCCCCATTCC +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITQGLKF*RQRPHS
Trigger: GGAATGGGGGCGTTGCCTGCAGAACTTTAGACCCTG...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCATGTCCGAATGTCTTGTaGTCGGAAGGCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPCPNVL*SEGTDS
Trigger: GCTGTCTGTGCCTTCCGACCACAAGACATTCGGACA...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTTGCACTCTCCAGGTCTaGGCTGGGGCACATCATTGT +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITCTLQV*AGAHHC
Trigger: ACAATGATGTGCCCCAGCCCAGACCTGGAGAGTGCA...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp AGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCTGCACTCTCCAGGTCTaGGCTGGGGCACATCATTGT +
Preference number: 4 (lower is better)
Translates to: SHFCLLSSYGGRNWSLRICTLQV*AGAHHC
Trigger: ACAATGATGTGCCCCAGCCCAGACCTGGAGAGTGCA...GATACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTCTGTCCATGAGTGGGTaGTCCCGGATGAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISLSMSG*SRMKVS
Trigger: ACTCACCTTCATCCGGGACCACCCACTCATGGACAG...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp AAAGTAGAGCAGAAAACTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTTGTGGCCTGTCCATGAGTaGGTGGTCCCGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: KVEQKTSKGKDWIIDWSLWPVHE*VVPDEG
Trigger: ACCTTCATCCGGGACCACCCACTCATGGACAGGCCA...CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAGTTTTCTGCTCTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CAAGGTATCTGTCCGAATCCAGTCCTCGGCACGACCCACTGCTCTGGTGATAATACCAGGAGCCAGCTGTaGTACAATTTCATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: QGICPNPVLGTTHCSGDNTRSQL*YNFMFS
Trigger: TGAGAACATGAAATTGTACCACAGCTGGCTCCTGGT...ATTATCACCAGAGCAGTGGGTCGTGCCGAGGACTGGATTCGGACAGATACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTCACTCTGAGCAGCTCTaGAGACGGCCACAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISHSEQL*RRPQLV
Trigger: AACCAACTGTGGCCGTCTCCAGAGCTGCTCAGAGTG...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTGCTGACTCTATGTCTTaGACCAACCCTCGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRADSMS*TNPRCS
Trigger: GGAGCACCGAGGGTTGGTCCAAGACATAGAGTCAGC...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGGCTGACTCTATGTCTTaGACCAACCCTCGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLADSMS*TNPRCS
Trigger: GGAGCACCGAGGGTTGGTCCAAGACATAGAGTCAGC...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTATTGCCCAGCTCTAGATaGATGTTTCATCACATGTGG +
Preference number: 4 (lower is better)
Translates to: IRQRSGPKPIQAQREQILLPSSR*MFHHMW
Trigger: CCACATGTGATGAAACATCCATCTAGAGCTGGGCAA...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp TCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTATTTGCCCAGCTCTAGATaGATGTTTCATCACATGTGG +
Preference number: 4 (lower is better)
Translates to: SRGLMWLPAKGRKSSGSYLPSSR*MFHHMW
Trigger: CCACATGTGATGAAACATCCATCTAGAGCTGGGCAA...ATAAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGAGAGAACTCAGAGGCTaGGATGGTCTTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLRELRG*DGLPGP
Trigger: TGGGCCTGGAAGACCATCCCAGCCTCTGAGTTCTCT...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCATTTAGAGTAAGGTTGTaGGGCAATGGGGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPFRVRL*GNGERG
Trigger: GCCCCTCTCCCCATTGCCCCACAACCTTACTCTAAA...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCATCAAAGGGGAAGGACTaGATCATTGACTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPSKGKD*IIDWSL
Trigger: CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGA...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AAACTCCCATCCCCGTCCTCACCTCGGGGAAAGCCACTTCTGCCTTCTCTCTTCCAAGAGTGCTTATTGTaGTTTCCATTGGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: KLPSPSSPRGKPLLPSLFQECLL*FPLEGM
Trigger: CATTCCTTCCAATGGAAACCACAATAAGCACTCTTG...GAAGAGAGAAGGCAGAAGTGGCTTTCCCCGAGGTGAGGACGGGGATGGGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTCCTCGTGTTTTGGGCTaGCATAAAGTTCAGATGAAC +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTPRVLG*HKVQMN
Trigger: GTTCATCTGAACTTTATGCCAGCCCAAAACACGAGG...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGAGTGCTGAGGATGGGTaGCACGTCCTCGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLSAEDG*HVLVFW
Trigger: CCAAAACACGAGGACGTGCCACCCATCCTCAGCACT...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CAA 72 bp GGGTCTAAAGTTCTGCAGGCAACGCCCCCATTCCAATaGTCTCCCTCCCCATCCCTCATAAATATTCCTAAG +
Preference number: 4 (lower is better)
Translates to: GSKVLQATPPFQ*SPSPSLINIPK
Trigger: CTTAGGAATATTTATGAGGGATGGGGAGGGAGACAATTGGAATGGGGGCGTTGCCTGCAGAACTTTAGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGCATGTTTTAGTTCTCTaGAGGGACCATTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVHVLVL*RDHSAL
Trigger: CAGTGCTGAATGGTCCCTTCAGAGAACTAAAACATG...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTGCTTCATGTTGTTGGTaGTGCACTCTCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITASCCW*CTLQVW
Trigger: CCAGACCTGGAGAGTGCATCACCAACAACATGAAGC...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTATAGGGGGCCAGGGATaGAGGTTTACAGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITIGGQG*RFTGVQ
Trigger: CTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTAT...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAATGGCCAGGTCTCTTATaGACACTATGTATTTACACG +
Preference number: 4 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKWPGLL*TLCIYT
Trigger: CGTGTAAATACATAGTGTTCATAAGAGACCTGGCCA...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGACTTTGTTAAGGCCTTaGAAATCTGACAAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQTLLRP*KSDKSH
Trigger: ATGGCTTTTGTCAGATTTTCAAGGCCTTAACAAAGT...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCAAGGGGACTCTTTTaGGTAGTTCACAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLPRGLF*VVHRLL
Trigger: CAGCAGCCTGTGAACTACTCAAAAGAGTCCCCTTGG...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp TCATCCAAGCCCATACAGAGGGTGAGCAGCTCCCTCCTTCCACACCAAGCATGGATGACTGTCCTTTACTaGGTGAGGCTTAATATGATT +
Preference number: 4 (lower is better)
Translates to: SSKPIQRVSSSLLPHQAWMTVLY*VRLNMI
Trigger: AATCATATTAAGCCTCACTCAGTAAAGGACAGTCAT...CCATGCTTGGTGTGGAAGGAGGGAGCTGCTCACCCTCTGTATGGGCTTGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTGGCCACAACCTCAAGTaGGTGGGGTTGAAAGATAGG +
Preference number: 4 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISGHNLK*VGLKDR
Trigger: CCTATCTTTCAACCCCACTCACTTGAGGTTGTGGCC...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp AGATGGATGTTTCATCACATGTGGCTAGAGGAGCCCCAGTTAGCCGAATGTGGGCAGGCAGTCCTCTGTTaGAGTCATGTTTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: RWMFHHMWLEEPQLAECGQAVLC*SHVLVL
Trigger: GAGAACTAAAACATGACTGCAACAGAGGACTGCCTG...CCCACATTCGGCTAACTGGGGCTCCTCTAGCCACATGTGATGAAACATCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR GCA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCAGCTCCGATCCGCACTaGTCGGTGGAGGTGTCCATC +
Preference number: 4 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVSSDPH*SVEVSI
Trigger: GATGGACACCTCCACCGAGCAGTGCGGATCGGAGCT...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp AAAGTAGAGCAGAAAACTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTTGGAGCATCTCGCTGGCTaGCCCATACCAAGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: KVEQKTSKGKDWIIDWSLEHLAG*PIPSCK
Trigger: CTTACAGCTTGGTATGGGGCAGCCAGCGAGATGCTC...CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAGTTTTCTGCTCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTGAGAGTCAGGGATGCTaGGAGAATCCCCAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVIESQGC*ENPQEE
Trigger: TTCTTCTTGGGGATTCTCGCAGCATCCCTGACTCTC...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCTCAAGTCTTTCAACCTaGTGGAACCTGGACACATCA +
Preference number: 4 (lower is better)
Translates to: QRSGPKPIQAQREQILKSSSLST*WNLDTS
Trigger: TGATGTGTCCAGGTTCCAGCAGGTTGAAAGACTTGA...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357877.7
CDS-3UTR GCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCTAACTTGGCCTCAGTaGAGTAACCTCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLLTWPQ*SNLRAV
Trigger: CACTGCCCTGAGGTTACTGCACTGAGGCCAAGTTAG...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAAGATGCCATAAAAGATaGGAGTCCCTGCCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPRCHKR*ESLPQA
Trigger: AGCTTGGGGCAGGGACTCCCATCTTTTATGGCATCT...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGTGTCCGAATGTCTTGTaGTCGGAAGGCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLCPNVL*SEGTDS
Trigger: GCTGTCTGTGCCTTCCGACCACAAGACATTCGGACA...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTATCAGCTGGAAACACTaGCCTGTCCATGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITISWKH*PVHEWV
Trigger: CACCCACTCATGGACAGGCCAGTGTTTCCAGCTGAT...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAGCTGGAAACACTaGCCTGTCCATGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRISWKH*PVHEWV
Trigger: CACCCACTCATGGACAGGCCAGTGTTTCCAGCTGAT...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAACCAGGAGCCAGCTGTaGTACAATTTCATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RQRSGPKPIQAQREQILKTRSQL*YNFMFS
Trigger: TGAGAACATGAAATTGTACCACAGCTGGCTCCTGGT...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTATGTGGTCCCAGAAGGTaGAGCCCCCAGGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVCGPRR*SPQVQA
Trigger: GGCCTGGACCTGGGGGCTCCACCTTCTGGGACCACA...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAATGTTTCATCACATGTaGCTAGAGGAGCCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: RQRSGPKPIQAQREQILKMFHHM*LEEPQL
Trigger: TAACTGGGGCTCCTCTAGCCACATGTGATGAAACAT...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp AAAGTAGAGCAGAAAACTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTTGAGAGAACTCAGAGGCTaGGATGGTCTTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KVEQKTSKGKDWIIDWSLRELRG*DGLPGP
Trigger: TGGGCCTGGAAGACCATCCCAGCCTCTGAGTTCTCT...CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAGTTTTCTGCTCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTGATGCCATCCTAACTTaGCCTCAGTGCAGTAACCTC +
Preference number: 4 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVIDAILT*PQCSNL
Trigger: GAGGTTACTGCACTGAGGCCAAGTTAGGATGGCATC...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTGACTGGATCATTGACTaGAGCTTGAGGGGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISDWIID*SLRGSS
Trigger: GCTTGAGCCCCTCAAGCTCCAGTCAATGATCCAGTC...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTATCTGGACAAAATTGTaGCATTCGTCCTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTIWTKL*HSSSFL
Trigger: CAAGAAAGAGGACGAATGTCACAATTTTGTCCAGAT...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357877.7
CDS-3UTR TCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTAGCAGGAAGAGGTCTTaGCGTTTGGTAAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITSRKRS*RLVRAD
Trigger: GTCAGCTCTTACCAAACGTCAAGACCTCTTCCTGCT...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAAGAGATGAGCCAAAGTaGCGGAGCTTCATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPRDEPK*RSFMLL
Trigger: CAACAACATGAAGCTCCGGCACTTTGGCTCATCTCT...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCTGCTACCACATGGGCTaGCCCACCCTCCTGACATTC +
Preference number: 4 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVCYHMG*PTLLTF
Trigger: GAATGTCAGGAGGGTGGGGCAGCCCATGTGGTAGCA...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp AAAGTAGAGCAGAAAACTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTTGAAGCCTAGAGCCATGTaGGAGTGGTCAAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KVEQKTSKGKDWIIDWSLKPRAM*EWSSRK
Trigger: CTTCCTGCTTGACCACTCGCACATGGCTCTAGGCTT...CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAGTTTTCTGCTCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTAGATGCCATAAAAGATaGGAGTCCCTGCCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISRCHKR*ESLPQA
Trigger: AGCTTGGGGCAGGGACTCCCATCTTTTATGGCATCT...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCGGGGTGGCCATCAGCTaGAAACACTGGCCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVGVAIS*KHWPVH
Trigger: ATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCC...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp TGGGGCACATCATTGTCCACGACAGGCAGTCCTCTGTTGCAGTCATGTTTTAGTACCAGGAGCCAGCTGTaGTACAATTTCATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: WGTSLSTTGSPLLQSCFSTRSQL*YNFMFS
Trigger: TGAGAACATGAAATTGTACCACAGCTGGCTCCTGGT...ACTAAAACATGACTGCAACAGAGGACTGCCTGTCGTGGACAATGATGTGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CCA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCCCAGTTAGCCGAATGTaGGCTGGGCTTGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVPVSRM*AGLGQG
Trigger: TCCTTGCCCAAGCCCAGCCCACATTCGGCTAACTGG...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTTGCTCTGGTGATAATTaGCTCCGTCCCCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRCSGDN*LRPQVV
Trigger: AACTACCTGGGGACGGAGCCAATTATCACCAGAGCA...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTAATTTCAGCAGGCTTTaGGGTAAAGAGGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVINFSRL*GKEAIP
Trigger: AGGGATGGCCTCTTTACCCCAAAGCCTGCTGAAATT...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCTTCCACACCAAGCATaGGGACCCTTTCTCACAATC +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLLPHQA*GPFLTI
Trigger: GATTGTGAGAAAGGGTCCCCATGCTTGGTGTGGAAG...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTCAACCTGCTGGAACCTaGACACATCCTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITQPAGT*THPLSC
Trigger: GCAAGAAAGAGGATGTGTCCAGGTTCCAGCAGGTTG...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611975.4
CDS-3UTR TCA 90 bp AGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAGAGGAGACATCTGCTaGCTCTATGTCTTGGACCAA +
Preference number: 4 (lower is better)
Translates to: SHFCLLSSYGGRNWSLRIRGDIC*LYVLDQ
Trigger: TTGGTCCAAGACATAGAGTCAGCAGATGTCTCCTCT...GATACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTTCATGGAAGGAAAACTaGGATGGGGAAGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITSWKEN*DGEDLR
Trigger: CCTGAGATCTTCCCCATCTCAGTTTTCCTTCCATGA...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR TCA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGACCCTGAGTAGTCACTaGTTGCAAACGTATCTTTAT +
Preference number: 4 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVTLSSH*LQTYLY
Trigger: ATAAAGATACGTTTGCAATCAGTGACTACTCAGGGT...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp TCAGCCATCTTCAGGGTGGTCATCCCTCTCCCAAGAATTCCACATGAATCCAGGACGTTTGGTAAGAGCTaGCAATGTCATCAAATACAC +
Preference number: 4 (lower is better)
Translates to: SAIFRVVIPLPRIPHESRTFGKS*QCHQIH
Trigger: GTGTATTTGATGACATTGTCAGCTCTTACCAAACGT...CCTGGATTCATGTGGAATTCTTGGGAGAGGGATGACCACCCTGAAGATGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCGTATGTGTGAGGGACTaGGAACCGGGTGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVVCVRD*EPGETG
Trigger: TCCTGTCTCACCCGGTTCGCAGTCCCTCACACATAC...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CAAATACACATAGAGCTCAGCTTCCAGGGACTGGAGAAACAAGAAGGCCTCCAGAAACGTGGGCAAGAGTaGTTATTGTGGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: QIHIELSFQGLEKQEGLQKRGQE*LLWFPL
Trigger: CAATGGAAACCACAATAAGCACTCTTGCCCACGTTT...CTGGAGGCCTTCTTGTTTCTCCAGTCCCTGGAAGCTGAGCTCTATGTGTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp CATTCTATACAAAGGGATCTCAGGCCACTAAGGTCAGACAGGTCTGAGGATTACGGGGAAAGCCACTTCTaGCTTCTCTCTTCTTATGGA +
Preference number: 4 (lower is better)
Translates to: HSIQRDLRPLRSDRSEDYGESHF*LLSSYG
Trigger: TCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTCCCC...GTAATCCTCAGACCTGTCTGACCTTAGTGGCCTGAGATCCCTTTGTATAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGTCAAGTCTTTCAACCTaGTGGAACCTGGACACATCC +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLSSLST*WNLDTS
Trigger: GGATGTGTCCAGGTTCCAGCAGGTTGAAAGACTTGA...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611975.4
CDS-3UTR CCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTGGAGACGGCCACAGTTaGTTGTATTCACTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITGDGHS*LYSLVS
Trigger: TGACACAAGTGAATACAACCAACTGTGGCCGTCTCC...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTAGTCACTCCACTGGGCTaGTGCCACACACAGGATGCC +
Preference number: 4 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVVTPLG*CHTQDA
Trigger: GGCATCCTGTGTGTGGCACCAGCCCAGTGGAGTGAC...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCGAAGGAAAACTGAGATaGGGAAGATCTCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SHFCLLSSYGGRNWSLRIEGKLR*GRSQGR
Trigger: TCTGCCCTGAGATCTTCCCCATCTCAGTTTTCCTTC...GATACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AAAGTAGAGCAGAAAACTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTTGAGACCCAGCAACCTTTaGCATCTCAGTGGTAACTCC +
Preference number: 4 (lower is better)
Translates to: KVEQKTSKGKDWIIDWSLRPSNL*HLSGNS
Trigger: GGAGTTACCACTGAGATGCCAAAGGTTGCTGGGTCT...CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAGTTTTCTGCTCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTAGTCTTTCAACCTGCTaGAACCTGGACACATCCTCT +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITSLSTC*NLDTSS
Trigger: AGAGGATGTGTCCAGGTTCCAGCAGGTTGAAAGACT...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611975.4
CDS-3UTR TCA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTTTTAATGCGCTCGTATaGGTCAAATGCTCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISFNALV*VKCSGS
Trigger: ACTTCCCGAGCATTTGACTCATACGAGCGCATTAAA...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR GCA 90 bp AAAGTAGAGCAGAAAACTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTTGAGAGATGAGCCAAAGTaGCGGAGCTTCATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KVEQKTSKGKDWIIDWSLRDEPK*RSFMLL
Trigger: CAACAACATGAAGCTCCGGCACTTTGGCTCATCTCT...CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAGTTTTCTGCTCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTACCAGGAGCCAGCTGTaGTACAATTTCATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITTRSQL*YNFMFS
Trigger: TGAGAACATGAAATTGTACCACAGCTGGCTCCTGGT...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTACCAGGAGCCAGCTGTaGTACAATTTCATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISTRSQL*YNFMFS
Trigger: TGAGAACATGAAATTGTACCACAGCTGGCTCCTGGT...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAAACTTCAAACACTACTaGACGTTCTCCAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LSGHSVPVITYTLVVICPNFKHY*TFSRLF
Trigger: AAAGAGCCTGGAGAACGTCCAGTAGTGTTTGAAGTT...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTATGTTTCATCACATGTaGCTAGAGGAGCCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISMFHHM*LEEPQL
Trigger: TAACTGGGGCTCCTCTAGCCACATGTGATGAAACAT...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTCCTCGTGTTTTGGGCTaGCATAAAGTTCAGATGAAC +
Preference number: 4 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRPRVLG*HKVQMN
Trigger: GTTCATCTGAACTTTATGCCAGCCCAAAACACGAGG...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CAA 72 bp AAAGCCACTGATAATTCCAAACCCAAGGGGACTCTTTaGAGTAGTTCACAGGCTGCTGCCAAGGAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: KATDNSKPKGTL*SSSQAAAKESR
Trigger: TCTACTTTCCTTGGCAGCAGCCTGTGAACTACTCAAAAGAGTCCCCTTGGGTTTGGAATTATCAGTGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CAA 72 bp CTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTaGCCCAGCTCTAGATGGATGTTTCATCACATGTGG +
Preference number: 4 (lower is better)
Translates to: LRSSDHLYTSGH*PSSRWMFHHMW
Trigger: CCACATGTGATGAAACATCCATCTAGAGCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR TCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTTGGCCAGGTCTCTTATaGACACTATGTATTTACACG +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITWPGLL*TLCIYT
Trigger: CGTGTAAATACATAGTGTTCATAAGAGACCTGGCCA...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTACCCTGAGTAGTCACTaGTTGCAAACGTATCTTTAT +
Preference number: 4 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVITLSSH*LQTYLY
Trigger: ATAAAGATACGTTTGCAATCAGTGACTACTCAGGGT...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CATAAAGTGTGTGGGAGGCAGGATCCACAAGGAGAACAGAGTAATTGTATGTGTTCACTTTTAACCTTGTaGCGTCTCCTAGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HKVCGRQDPQGEQSNCMCSLLTL*RLLASS
Trigger: GGAAGAAGCTAGGAGACGTCACAAGGTTAAAAGTGA...ACACATACAATTACTCTGTTCTCCTTGTGGATCCTGCCTCCCACACACTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416236.5
CDS-3UTR GCA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCGAGAGTCAGGGATGCTaGGAGAATCCCCAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVESQGC*ENPQEE
Trigger: TTCTTCTTGGGGATTCTCGCAGCATCCCTGACTCTC...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGAACTTCAAACACTACTaGACGTTCTCCAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLNFKHY*TFSRLF
Trigger: AAAGAGCCTGGAGAACGTCCAGTAGTGTTTGAAGTT...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CCA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTCCTTCTCTCTTCTTATaGAGGAAGGAATTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRPSLFL*RKELEL
Trigger: AAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGG...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTACTTTGTTAAGGCCTTaGAAATCTGACAAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVITLLRP*KSDKSH
Trigger: ATGGCTTTTGTCAGATTTTCAAGGCCTTAACAAAGT...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTACCCAAGAATTCCACATaGATCCAGGGGGCTCATGTG +
Preference number: 4 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVPKNST*IQGAHV
Trigger: CACATGAGCCCCCTGGATTCATGTGGAATTCTTGGG...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCACGCCATTCCCTCTATaGCTACAGGGTCTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVTPFPL*LQGLKF
Trigger: GAACTTTAGACCCTGTAGCCATAGAGGGAATGGCGT...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AAAGTAGAGCAGAAAACTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTTGAAACAAAGAAAAGGATaGGGTCATGTGTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: KVEQKTSKGKDWIIDWSLKQRKG*GHVYCC
Trigger: GCAGCAGTACACATGACCCCATCCTTTTCTTTGTTT...CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAGTTTTCTGCTCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
3UTR CAA 72 bp CCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATaGGAGCTTACGTATCAAACACACTTAAGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: PLLPSLFLWRKE*ELTYQTHLSVS
Trigger: AGACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTAGAACAGGATATCTGTaGAACAATGACTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: PQAHPGSERTDTKIQVITRTGYL*NNDCPL
Trigger: TAAAGGACAGTCATTGTTTCACAGATATCCTGTTCT...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CCA 90 bp AAAGTAGAGCAGAAAACTTCAAAGGGGAAGGACTGGATCATTGACTGGAGCTTGCAAGAGTGCTTATTGTaGTTTCCATTGGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: KVEQKTSKGKDWIIDWSLQECLL*FPLEGM
Trigger: CATTCCTTCCAATGGAAACCACAATAAGCACTCTTG...CAAGCTCCAGTCAATGATCCAGTCCTTCCCCTTTGAAGTTTTCTGCTCTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTAAGAGATGAGCCAAAGTaGCGGAGCTTCATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVRDEPK*RSFMLL
Trigger: CAACAACATGAAGCTCCGGCACTTTGGCTCATCTCT...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR GCA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTACAGGCAGTCCTCTGTTaGAGTCATGTTTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVQAVLC*SHVLVL
Trigger: GAGAACTAAAACATGACTGCAACAGAGGACTGCCTG...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCAGAACAGGATATCTGTaGAACAATGACTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVRTGYL*NNDCPL
Trigger: TAAAGGACAGTCATTGTTTCACAGATATCCTGTTCT...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR TCA 90 bp TTCAGAGAATCCCTGCTGTCTTACAAATGTACCCAGGTTTGTTTTAATAAGGTAACGTTTGGTAAGAGCTaGCAATGTCATCAAATACAC +
Preference number: 4 (lower is better)
Translates to: FRESLLSYKCTQVCFNKVTFGKS*QCHQIH
Trigger: GTGTATTTGATGACATTGTCAGCTCTTACCAAACGT...TACCTTATTAAAACAAACCTGGGTACATTTGTAAGACAGCAGGGATTCTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS CCA 90 bp CCCGGGCGGGGCCGCGCAGCAGAGGCCGGCATCTTTGGCTCCGCCTaGCCGCGGGTGCGGCGCAAGCTACGGCCTCTGCTCAGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: PGRGRAAEAGIFGSA*PRVRRKLRPLLRAP
Trigger: CGGGGCCCTGAGCAGAGGCCGTAGCTTGCGCCGCACCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCTGCTGCGCGGCCCCGCCCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000416236.5
ENST00000420077.5
ENST00000434486.5
ENST00000453930.5
ENST00000458114.5
ENST00000611975.4
CDS CCA 90 bp CTGCCCGGGACCCGGGCGGGGCCGCGCAGCAGAGGCCGGCATCTTTaGCTCCGCCTGGCCGCGGGTGCGGCGCAAGCTACGGCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LPGTRAGPRSRGRHL*LRLAAGAAQATASA
Trigger: AGCAGAGGCCGTAGCTTGCGCCGCACCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCTGCTGCGCGGCCCCGCCCGGGTCCCGGGCAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000416236.5
ENST00000420077.5
ENST00000434486.5
ENST00000453930.5
ENST00000458114.5
ENST00000611975.4
CDS GCA 90 bp GCCGCGCAGCAGAGGCCGGCATCTTTGGCTCCGCCTGGCCGCGGGTaGGGCGCAAGCTACGGCCTCTGCTCAGGGCCCCGGGGCTACTGG +
Preference number: 5 (lower is better)
Translates to: AAQQRPASLAPPGRG*GASYGLCSGPRGYW
Trigger: CCAGTAGCCCCGGGGCCCTGAGCAGAGGCCGTAGCTTGCGCCGCACCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCTGCTGCGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000420077.5
ENST00000434486.5
ENST00000458114.5
ENST00000611975.4
CDS-3UTR CAA 90 bp CCCATTCGGCTGGGCTCAAGGCCACGGCTGCGACAAAGGCTGGGGCGTTCAGCCCAGAGGCCGGCATCTTaGGCTCCGCCTGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: PIRLGSRPRLRQRLGRSAQRPAS*APPGRG
Trigger: CCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCTG...GGCTGAACGCCCCAGCCTTTGTCGCAGCCGTGGCCTTGAGCCCAGCCGAATGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458114.5
CDS-3UTR CAA 90 bp TGGAGCCCCCAGGTCCAGGCCCACCTTGTCTCTAGCCAGAAGTTCCCTCTGTCGCAGAGGCCGGCATCTTaGGCTCCGCCTGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: WSPQVQAHLVSSQKFPLSQRPAS*APPGRG
Trigger: CCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCTG...CGACAGAGGGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCTGGGGGCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420077.5
CDS-3UTR CAA 90 bp GAAGCCAGCCAGTCCCGCCCCCACTGTGTGGGCCCGGCTCGGAGCATCTCGCTGGGTCTTGGCTGTAGCTaGTGGTCCCAGAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: EASQSRPHCVGPARSISLGLGCS*WSQKVE
Trigger: CTCCACCTTCTGGGACCACAAGCTACAGCCAAGACC...CAGCGAGATGCTCCGAGCCGGGCCCACACAGTGGGGGCGGGACTGGCTGGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp CCAACCACCTCCAGGGCTCTTCCTTCCGGCCAGGCTCCAACCAGAAAGCAAAGTCAGAGGCCGGCATCTTaGGCTCCGCCTGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: PTTSRALPSGQAPTRKQSQRPAS*APPGRG
Trigger: CCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCTG...ACTTTGCTTTCTGGTTGGAGCCTGGCCGGAAGGAAGAGCCCTGGAGGTGGTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp AGCGAAGATGGTGTCCCGGGCGCCAACATAAAGTGTGTGGGAGGCAGGATCCACCAGAGGCCGGCATCTTaGGCTCCGCCTGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: SEDGVPGANIKCVGGRIHQRPAS*APPGRG
Trigger: CCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCTG...GTGGATCCTGCCTCCCACACACTTTATGTTGGCGCCCGGGACACCATCTTCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416236.5
CDS-3UTR CAA 90 bp TGGAGCCCCCAGGTCCAGGCCCACCTTGTCTCTAGCCAGAAGTTCCCTCTGTCGAAGCCACTGCCCCTCTaGGCCAGGGCCAGCGGCAAC +
Preference number: 5 (lower is better)
Translates to: WSPQVQAHLVSSQKFPLSKPLPL*ARASGN
Trigger: GTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTT...CGACAGAGGGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCTGGGGGCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp CTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGAGGGTCCACTGTCCGAATGTCTaGTGGTCGGAAGGCACAGAC +
Preference number: 5 (lower is better)
Translates to: LGQGQRQPLIFRRGGGRVHCPNV*WSEGTD
Trigger: GTCTGTGCCTTCCGACCACAAGACATTCGGACAGTG...GACCCTCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTACAGAGGCCGGCATCTTaGGCTCCGCCTGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: IRQRSGPKPIQAQREQILQRPAS*APPGRG
Trigger: CCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCTG...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp ATAAGCGCCCATGGCCCCTGGGGTCACCACCACCTCCAGTCCATCCCGCCGGGGTGGAGACGGCCACAGTaGGTTGTATTCACTTGTGTC +
Preference number: 5 (lower is better)
Translates to: ISAHGPWGHHHLQSIPPGWRRPQ*VVFTCV
Trigger: GACACAAGTGAATACAACCAACTGTGGCCGTCTCCA...CCCCGGCGGGATGGACTGGAGGTGGTGGTGACCCCAGGGGCCATGGGCGCTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp CCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGCCGGAAGCTCCAGGCAATGCCCATGCTGAGCTaGGAGAACATGGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: PRCSPAWATHSSSRKLQAMPMLS*ENMARP
Trigger: TGGTCTTGCCATGTTCTCCAAGCTCAGCATGGGCAT...TGCCTGGAGCTTCCGGCTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp CCACCAAAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGTCTTGGCTGTAGCTaGTGGTCCCAGAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: PPKPLPLLARASGNRSSSGLGCS*WSQKVE
Trigger: CTCCACCTTCTGGGACCACAAGCTACAGCCAAGACC...TGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp ATCTGTCCGAATCCAGTCCTCGGCACGACCCACTGCTCTGGTGATAATTGGCTCAAGCCACTGCCCCTCTaGGCCAGGGCCAGCGGCAAC +
Preference number: 5 (lower is better)
Translates to: ICPNPVLGTTHCSGDNWLKPLPL*ARASGN
Trigger: GTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTT...GAGCCAATTATCACCAGAGCAGTGGGTCGTGCCGAGGACTGGATTCGGACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp TTCACAGGCATAAGCGCCCATGGCCCCTGGGGTCACCACCACCTCCAGTCCATCAGTCAGCCTCAGAGATaGGAAGCGAGGTTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: FTGISAHGPWGHHHLQSISQPQR*EARFWA
Trigger: TGCCCAGAACCTCGCTTCCAATCTCTGAGGCTGACT...GATGGACTGGAGGTGGTGGTGACCCCAGGGGCCATGGGCGCTTATGCCTGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp AGGGAGGGTCTTGGCTGTAGCTTGTGGTCCCAGAAGGTGGAGCCCCCAGGTCCAAGTCAGCCTCAGAGATaGGAAGCGAGGTTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: REGLGCSLWSQKVEPPGPSQPQR*EARFWA
Trigger: TGCCCAGAACCTCGCTTCCAATCTCTGAGGCTGACT...TGGACCTGGGGGCTCCACCTTCTGGGACCACAAGCTACAGCCAAGACCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp CCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGGAGAGGGGGAGGGAGTTGGTTGTATTCACTaGTGTCACCTCAGTACGGGA +
Preference number: 5 (lower is better)
Translates to: PLLARASGNRSSSGEGEGVGCIH*CHLSTG
Trigger: TCCCGTACTGAGGTGACACAAGTGAATACAACCAAC...TCCCTCCCCCTCTCCTGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp TATGTCTTGGACCAACCCTCGGTGCTCCCCGGCATGGGCCACACACTCATCCAGAGGTCCAGGCCCACCTaGTCTCTAGCCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: YVLDQPSVLPGMGHTLIQRSRPT*SLARSS
Trigger: GGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCT...CTGGATGAGTGTGTGGCCCATGCCGGGGAGCACCGAGGGTTGGTCCAAGACATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp CCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGCGAGTGGTCAAGCAGGAAGAGGACTCAGGGCACATTaGCCCCCAACCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PGLSRRSLEPCASGQAGRGLRAH*PPTTSR
Trigger: CCTGGAGGTGGTTGGGGGCAAATGTGCCCTGAGTCC...TCTTCCTGCTTGACCACTCGCACATGGCTCTAGGCTTCTCCTGCTGAGTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp GGACTGGAGAAACAAGAAGGCCTCCAGCAGCTACCAGTCCAGGGACTGGCCACAAAGCACCAGGGTCAGTaGGGATGCAGAGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: GLEKQEGLQQLPVQGLATKHQGQ*GCRGSR
Trigger: CCTGCTCCCTCTGCATCCCAACTGACCCTGGTGCTT...TGTGGCCAGTCCCTGGACTGGTAGCTGCTGGAGGCCTTCTTGTTTCTCCAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS TCA 90 bp GGCTGTGGCTCTGGGAATAAGGCCAGATCTTCAAGAACGCTGAGCTaGGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCATCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: GCGSGNKARSSRTLS*APIRTARWRCPSSL
Trigger: GAGAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTTCTTGAAGATCTGGCCTTATTCCCAGAGCCACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473350.1
CDS-3UTR CAA 90 bp GAATCCACCAAAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCGACGGCCACAGTTGGTaGTATTCACTTGTGTCACCT +
Preference number: 5 (lower is better)
Translates to: ESTKATAPLGQGQRQPLIDGHSW*YSLVSP
Trigger: AGGTGACACAAGTGAATACAACCAACTGTGGCCGTC...GATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp CAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGCCACTGCCCCTCTaGGCCAGGGCCAGCGGCAAC +
Preference number: 5 (lower is better)
Translates to: QRSGPKPIQAQREQILKSKPLPL*ARASGN
Trigger: GTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTT...GGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAAAGCCACTGCCCCTCTaGGCCAGGGCCAGCGGCAAC +
Preference number: 5 (lower is better)
Translates to: RQRSGPKPIQAQREQILKKPLPL*ARASGN
Trigger: GTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTT...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp CATGAGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCAGGCAGGGAGAGAGAGGGGGAAGCCCTGATTaGCTGCAGAAAGCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: HEWVVPDEGEYAVRQGERGGSPD*LQKAVL
Trigger: CAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCC...TCTCTCTCCCTGCCTGACCGCGTACTCACCTTCATCCGGGACCACCCACTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CAA 90 bp GCCGAATGTGGGCTGGGCTTGGGCAAGGATCAAGCAGGAAGGGTGGTGAGAATCCACTGTCCGAATGTCTaGTGGTCGGAAGGCACAGAC +
Preference number: 5 (lower is better)
Translates to: AECGLGLGKDQAGRVVRIHCPNV*WSEGTD
Trigger: GTCTGTGCCTTCCGACCACAAGACATTCGGACAGTG...GATTCTCACCACCCTTCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp CCACCAAAGCCACTGCCCCTCTTGGCCAGGGCCAGCGGCAACCGCTCATCTTCAGTTGGTTGTATTCACTaGTGTCACCTCAGTACGGGA +
Preference number: 5 (lower is better)
Translates to: PPKPLPLLARASGNRSSSVGCIH*CHLSTG
Trigger: TCCCGTACTGAGGTGACACAAGTGAATACAACCAAC...TGAAGATGAGCGGTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTTTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp TTGAGGGGCTCAAGCACCAGGGATGAACGAGGCACATTCACAGGCCAAGACCAGAGTCAGCCTCAGAGATaGGAAGCGAGGTTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LRGSSTRDERGTFTGQDQSQPQR*EARFWA
Trigger: TGCCCAGAACCTCGCTTCCAATCTCTGAGGCTGACT...CTGGTCTTGGCCTGTGAATGTGCCTCGTTCATCCCTGGTGCTTGAGCCCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp GCTCAGGCCCTGGACAGAGCAGGTCAGCTTTCAAAAACGTCGTCCATCTCTGCTGAATGTGGGCTGGGCTaGGGCAAGGATCAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: AQALDRAGQLSKTSSISAECGLG*GKDQAG
Trigger: TCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTC...AGCAGAGATGGACGACGTTTTTGAAAGCTGACCTGCTCTGTCCAGGGCCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp CCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTGGACTCAGGGCACATTaGCCCCCAACCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PPASQWSLRSSDHLYTSGGLRAH*PPTTSR
Trigger: CCTGGAGGTGGTTGGGGGCAAATGTGCCCTGAGTCC...ACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp CATGAGTGGGTGGTCCCGGATGAAGGTGAGTACGCGGTCAGGCAGGGAGAGAGAGGCAGAGACTCCATATaGCAACATGGGGATCATGCA +
Preference number: 5 (lower is better)
Translates to: HEWVVPDEGEYAVRQGERGRDSI*QHGDHA
Trigger: TGCATGATCCCCATGTTGCAATATGGAGTCTCTGCC...TCTCTCTCCCTGCCTGACCGCGTACTCACCTTCATCCGGGACCACCCACTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CAA 90 bp ACAAAGAAAAGGATGGGGTCATGTGTACTGCTGCCCTTCCCACCCGGAAGGTCAACGCCCCCATTCCAATaGTCTCCCTCCCCATCCCTC +
Preference number: 5 (lower is better)
Translates to: TKKRMGSCVLLPFPPGRSTPPFQ*SPSPSL
Trigger: GAGGGATGGGGAGGGAGACAATTGGAATGGGGGCGT...TGACCTTCCGGGTGGGAAGGGCAGCAGTACACATGACCCCATCCTTTTCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp AAACTCCCATCCCCGTCCTCACCTCGGGGAAAGCCACTTCTGCCTTCTCTCTTCATCATTGACTGGAGCTaGAGGGGCTCAAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: KLPSPSSPRGKPLLPSLFIIDWS*RGSSTR
Trigger: CCTGGTGCTTGAGCCCCTCAAGCTCCAGTCAATGAT...GAAGAGAGAAGGCAGAAGTGGCTTTCCCCGAGGTGAGGACGGGGATGGGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGTGCAGTGGCGTGATCTaGGCTCACTGCAAACTCCAC +
Preference number: 5 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVCSGVI*AHCKLH
Trigger: GTGGAGTTTGCAGTGAGCCAAGATCACGCCACTGCA...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp TCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTATAAGCACCAGGGTCAGTaGGGATGCAGAGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SRGLMWLPAKGRKSSGSYKHQGQ*GCRGSR
Trigger: CCTGCTCCCTCTGCATCCCAACTGACCCTGGTGCTT...ATAAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp GGACTGGAGAAACAAGAAGGCCTCCAGCAGCTACCAGTCCAGGGACTGGCCACAGACGGCCACAGTTGGTaGTATTCACTTGTGTCACCT +
Preference number: 5 (lower is better)
Translates to: GLEKQEGLQQLPVQGLATDGHSW*YSLVSP
Trigger: AGGTGACACAAGTGAATACAACCAACTGTGGCCGTC...TGTGGCCAGTCCCTGGACTGGTAGCTGCTGGAGGCCTTCTTGTTTCTCCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp ATGTCTTGTGGTCGGAAGGCACAGACAGCAGAGATAGTAGCCCCCTCCCACTGGATGCCCATGCTGAGCTaGGAGAACATGGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: MSCGRKAQTAEIVAPSHWMPMLS*ENMARP
Trigger: TGGTCTTGCCATGTTCTCCAAGCTCAGCATGGGCAT...CCAGTGGGAGGGGGCTACTATCTCTGCTGTCTGTGCCTTCCGACCACAAGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGAAGCCACTGCCCCTCTaGGCCAGGGCCAGCGGCAAC +
Preference number: 5 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLKPLPL*ARASGN
Trigger: GTTGCCGCTGGCCCTGGCCAAGAGGGGCAGTGGCTT...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTGAATGTGGGCTGGGCTaGGGCAAGGATCAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLECGLG*GKDQAG
Trigger: TCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTC...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAGAAGCCCAGTCCCCTTaGACATCTCCCCACCTTCCT +
Preference number: 5 (lower is better)
Translates to: IRQRSGPKPIQAQREQILEAQSP*TSPHLP
Trigger: AGGAAGGTGGGGAGATGTCAAAGGGGACTGGGCTTC...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp TCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTATGAAGCCCAGTCCCCTTaGACATCTCCCCACCTTCCT +
Preference number: 5 (lower is better)
Translates to: SRGLMWLPAKGRKSSGSYEAQSP*TSPHLP
Trigger: AGGAAGGTGGGGAGATGTCAAAGGGGACTGGGCTTC...ATAAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp CACACACGGGCCACCCGTGGGACTTTAATGCGCTCGTATGAGTCAAATGCTCGGCCAGTCAATCAGAGATaGGAAGCGAGGTTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: HTRATRGTLMRSYESNARPVNQR*EARFWA
Trigger: TGCCCAGAACCTCGCTTCCAATCTCTGATTGACTGG...CCGAGCATTTGACTCATACGAGCGCATTAAAGTCCCACGGGTGGCCCGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458114.5
CDS-3UTR CAA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAACACTGTCCGAATGTCTaGTGGTCGGAAGGCACAGAC +
Preference number: 5 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKHCPNV*WSEGTD
Trigger: GTCTGTGCCTTCCGACCACAAGACATTCGGACAGTG...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp AACGCTGAGCTGAGCTCCGATCCGCACTGCTCGGTGGAGGTGTCCATCCTCTGTACAGGCAGTCCTCTGTaGCAGTCATGTTTTAGTTCT +
Preference number: 5 (lower is better)
Translates to: NAELSSDPHCSVEVSILCTGSPL*QSCFSS
Trigger: AGAACTAAAACATGACTGCAACAGAGGACTGCCTGT...ACAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp TCATCCAAGCCCATACAGAGGGTGAGCAGCTCCCTCCTTCCACACCAAGCATGGTGGAGACGGCCACAGTaGGTTGTATTCACTTGTGTC +
Preference number: 5 (lower is better)
Translates to: SSKPIQRVSSSLLPHQAWWRRPQ*VVFTCV
Trigger: GACACAAGTGAATACAACCAACTGTGGCCGTCTCCA...CCATGCTTGGTGTGGAAGGAGGGAGCTGCTCACCCTCTGTATGGGCTTGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAAGGTCCAGGCCCACCTaGTCTCTAGCCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: RQRSGPKPIQAQREQILKRSRPT*SLARSS
Trigger: GGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCT...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCAAGGTCCAGGCCCACCTaGTCTCTAGCCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPRSRPT*SLARSS
Trigger: GGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCT...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp GAGCAGCTCTGGAGACGGCCACAGTTGGTTGTATTCACTTGTGTCACCTCAGTAAGGTCCAGGCCCACCTaGTCTCTAGCCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: EQLWRRPQLVVFTCVTSVRSRPT*SLARSS
Trigger: GGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCT...TACTGAGGTGACACAAGTGAATACAACCAACTGTGGCCGTCTCCAGAGCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp AGCTGTAGCCACGGGAACTTCAAACACTACTGGACGTTCTCCAGGCTCTTTAGGGAATGTGGGCTGGGCTaGGGCAAGGATCAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SCSHGNFKHYWTFSRLFRECGLG*GKDQAG
Trigger: TCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTC...CCTAAAGAGCCTGGAGAACGTCCAGTAGTGTTTGAAGTTCCCGTGGCTACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp TGGGCCCAAGATAGGGGGCCAGGGATGAAGGTTTACAGGAGTTCAGATGTTAGGGGGGGAAGCCCTGATTaGCTGCAGAAAGCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: WAQDRGPGMKVYRSSDVRGGSPD*LQKAVL
Trigger: CAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCC...CCTAACATCTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTATCTTGGGCCCA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp AAACTCCCATCCCCGTCCTCACCTCGGGGAAAGCCACTTCTGCCTTCTCTCTTCATTAGTGGCCCTTACTaGACAGACATGCAACGTGCC +
Preference number: 5 (lower is better)
Translates to: KLPSPSSPRGKPLLPSLFISGPY*TDMQRA
Trigger: GGCACGTTGCATGTCTGTCAAGTAAGGGCCACTAAT...GAAGAGAGAAGGCAGAAGTGGCTTTCCCCGAGGTGAGGACGGGGATGGGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp CCCTGTTCCAGGCAGGGCAAGTCCAGGGAGAGCTGCCACAGAGTGATGCCATCCCATCTGATGAGATATTaGATCTCAGCCATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PCSRQGKSRESCHRVMPSHLMRY*ISAIFR
Trigger: CCTGAAGATGGCTGAGATCAAATATCTCATCAGATG...GGATGGCATCACTCTGTGGCAGCTCTCCCTGGACTTGCCCTGCCTGGAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS GCA 90 bp GGCAGGATCCACAAGGAGAACAGAGTAATTGTATGTGTGAGGGACTaGGAACCGGGTGAGACAGGAGTCAGCCTCAGAGATTGGAAGCGA +
Preference number: 5 (lower is better)
Translates to: GRIHKENRVIVCVRD*EPGETGVSLRDWKR
Trigger: TCGCTTCCAATCTCTGAGGCTGACTCCTGTCTCACCCGGTTCGCAGTCCCTCACACATACAATTACTCTGTTCTCCTTGTGGATCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000420077.5
ENST00000434486.5
ENST00000446927.5
ENST00000453930.5
ENST00000611975.4
CDS-3UTR CAA 90 bp AAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTGCGAGTGGTCAAGCAGGGTTGGTTGTATTCACTaGTGTCACCTCAGTACGGGA +
Preference number: 5 (lower is better)
Translates to: KTRTQQEKPRAMCEWSSRVGCIH*CHLSTG
Trigger: TCCCGTACTGAGGTGACACAAGTGAATACAACCAAC...CCTGCTTGACCACTCGCACATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp TGGGCCCAAGATAGGGGGCCAGGGATGAAGGTTTACAGGAGTTCAGATGTTAGGATGCCCATGCTGAGCTaGGAGAACATGGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: WAQDRGPGMKVYRSSDVRMPMLS*ENMARP
Trigger: TGGTCTTGCCATGTTCTCCAAGCTCAGCATGGGCAT...CCTAACATCTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTATCTTGGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp CAAATACACATAGAGCTCAGCTTCCAGGGACTGGAGAAACAAGAAGGCCTCCAGAGGTCCAGGCCCACCTaGTCTCTAGCCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: QIHIELSFQGLEKQEGLQRSRPT*SLARSS
Trigger: GGAACTTCTGGCTAGAGACAAGGTGGGCCTGGACCT...CTGGAGGCCTTCTTGTTTCTCCAGTCCCTGGAAGCTGAGCTCTATGTGTATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCGGTCTTGGCTGTAGCTaGTGGTCCCAGAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: QWSLRSSDHLYTSGHLPSGLGCS*WSQKVE
Trigger: CTCCACCTTCTGGGACCACAAGCTACAGCCAAGACC...GCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCGAATGTGGGCTGGGCTaGGGCAAGGATCAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: QWSLRSSDHLYTSGHLPSECGLG*GKDQAG
Trigger: TCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTC...GCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp TCAGCCATCTTCAGGGTGGTCATCCCTCTCCCAAGAATTCCACATGAATCCAGGGGGGGAAGCCCTGATTaGCTGCAGAAAGCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: SAIFRVVIPLPRIPHESRGGSPD*LQKAVL
Trigger: CAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCC...CCTGGATTCATGTGGAATTCTTGGGAGAGGGATGACCACCCTGAAGATGGCTGA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTGGACTCAGGGCACATTaGCCCCCAACCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PQAHPGSERTDTKIQVITGLRAH*PPTTSR
Trigger: CCTGGAGGTGGTTGGGGGCAAATGTGCCCTGAGTCC...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCATGCAGTGGCGTGATCTaGGCTCACTGCAAACTCCAC +
Preference number: 5 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPCSGVI*AHCKLH
Trigger: GTGGAGTTTGCAGTGAGCCAAGATCACGCCACTGCA...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp TGGGCCCAAGATAGGGGGCCAGGGATGAAGGTTTACAGGAGTTCAGATGTTAGGGCACGTCCTCGTGTTTaGGGCTGGCATAAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: WAQDRGPGMKVYRSSDVRARPRV*GWHKVQ
Trigger: CTGAACTTTATGCCAGCCCAAAACACGAGGACGTGC...CCTAACATCTGAACTCCTGTAAACCTTCATCCCTGGCCCCCTATCTTGGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp GGGAGCCAAGGAAATGGGGTACAGCCTACACTCCAGCCAGAGAAAGCAGCTGTGACACTTAAGTGTGTCTaGAGAGTGCTGAGGATGGGT +
Preference number: 5 (lower is better)
Translates to: GSQGNGVQPTLQPEKAAVTLKCV*RVLRMG
Trigger: ACCCATCCTCAGCACTCTCAAGACACACTTAAGTGT...CACAGCTGCTTTCTCTGGCTGGAGTGTAGGCTGTACCCCATTTCCTTGGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp ATCTGTAGTGACCAGCAGGGGGTGGCCATCAGCTGGAAACACTGGCCTGTCCATACAGGCAGTCCTCTGTaGCAGTCATGTTTTAGTTCT +
Preference number: 5 (lower is better)
Translates to: ICSDQQGVAISWKHWPVHTGSPL*QSCFSS
Trigger: AGAACTAAAACATGACTGCAACAGAGGACTGCCTGT...ATGGACAGGCCAGTGTTTCCAGCTGATGGCCACCCCCTGCTGGTCACTACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAATGGAGACGGCCACAGTaGGTTGTATTCACTTGTGTC +
Preference number: 5 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKWRRPQ*VVFTCV
Trigger: GACACAAGTGAATACAACCAACTGTGGCCGTCTCCA...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAATGCCCATGCTGAGCTaGGAGAACATGGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: RQRSGPKPIQAQREQILKMPMLS*ENMARP
Trigger: TGGTCTTGCCATGTTCTCCAAGCTCAGCATGGGCAT...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp CACTGTCCGAATGTCTTGTGGTCGGAAGGCACAGACAGCAGAGATAGTAGCCCCTACACTAGTGGTCATTaGCCCAGCTCTAGATGGATG +
Preference number: 5 (lower is better)
Translates to: HCPNVLWSEGTDSRDSSPYTSGH*PSSRWM
Trigger: CATCCATCTAGAGCTGGGCAAATGACCACTAGTGTA...GGGGCTACTATCTCTGCTGTCTGTGCCTTCCGACCACAAGACATTCGGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446927.5
CDS-3UTR CAA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAGGCAGAGACTCCATATaGCAACATGGGGATCATGCA +
Preference number: 5 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKGRDSI*QHGDHA
Trigger: TGCATGATCCCCATGTTGCAATATGGAGTCTCTGCC...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTGGCAGAGACTCCATATaGCAACATGGGGATCATGCA +
Preference number: 5 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTGRDSI*QHGDHA
Trigger: TGCATGATCCCCATGTTGCAATATGGAGTCTCTGCC...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCAGCACGTCCTCGTGTTTaGGGCTGGCATAAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPARPRV*GWHKVQ
Trigger: CTGAACTTTATGCCAGCCCAAAACACGAGGACGTGC...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCACACTGTCCGAATGTCTaGTGGTCGGAAGGCACAGAC +
Preference number: 5 (lower is better)
Translates to: LSGHSVPVITYTLVVICPHCPNV*WSEGTD
Trigger: GTCTGTGCCTTCCGACCACAAGACATTCGGACAGTG...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAGTTGGTTGTATTCACTaGTGTCACCTCAGTACGGGA +
Preference number: 5 (lower is better)
Translates to: IRQRSGPKPIQAQREQILVGCIH*CHLSTG
Trigger: TCCCGTACTGAGGTGACACAAGTGAATACAACCAAC...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAGACGGCCACAGTTGGTaGTATTCACTTGTGTCACCT +
Preference number: 5 (lower is better)
Translates to: RQRSGPKPIQAQREQILKDGHSW*YSLVSP
Trigger: AGGTGACACAAGTGAATACAACCAACTGTGGCCGTC...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp GAAGATCTCAGGGCAGAGACTCCATATTGCAACATGGGGATCATGCACTCCCCAGACGGCCACAGTTGGTaGTATTCACTTGTGTCACCT +
Preference number: 5 (lower is better)
Translates to: EDLRAETPYCNMGIMHSPDGHSW*YSLVSP
Trigger: AGGTGACACAAGTGAATACAACCAACTGTGGCCGTC...TGGGGAGTGCATGATCCCCATGTTGCAATATGGAGTCTCTGCCCTGAGATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp AGATGGATGTTTCATCACATGTGGCTAGAGGAGCCCCAGTTAGCCGAATGTGGGGACGGCCACAGTTGGTaGTATTCACTTGTGTCACCT +
Preference number: 5 (lower is better)
Translates to: RWMFHHMWLEEPQLAECGDGHSW*YSLVSP
Trigger: AGGTGACACAAGTGAATACAACCAACTGTGGCCGTC...CCCACATTCGGCTAACTGGGGCTCCTCTAGCCACATGTGATGAAACATCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTGGTCTTGGCTGTAGCTaGTGGTCCCAGAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISGLGCS*WSQKVE
Trigger: CTCCACCTTCTGGGACCACAAGCTACAGCCAAGACC...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp CCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAATCCAAGTAATCACTGAATGTGGGCTGGGCTaGGGCAAGGATCAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: PQAHPGSERTDTKIQVITECGLG*GKDQAG
Trigger: TCCTGCTTGATCCTTGCCCAAGCCCAGCCCACATTC...AGTGATTACTTGGATTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp AATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTTACACTAGTGGTCATTaGCCCAGCTCTAGATGGATG +
Preference number: 5 (lower is better)
Translates to: NQAKVWPQAHPGSERTDTYTSGH*PSSRWM
Trigger: CATCCATCTAGAGCTGGGCAAATGACCACTAGTGTA...AGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp CAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAAATTTAGAGTAAGGTaGTGGGGCAATGGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: QAKVWPQAHPGSERTDTKKFRVR*WGNGER
Trigger: CCTCTCCCCATTGCCCCACAACCTTACTCTAAATTT...TTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGAGTCAGCCTCAGAGATaGGAAGCGAGGTTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLSQPQR*EARFWA
Trigger: TGCCCAGAACCTCGCTTCCAATCTCTGAGGCTGACT...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTCACTGTCCGAATGTCTaGTGGTCGGAAGGCACAGAC +
Preference number: 5 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISHCPNV*WSEGTD
Trigger: GTCTGTGCCTTCCGACCACAAGACATTCGGACAGTG...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp AATCCAGGGGGCTCATGTGGCTCCCAGCAAAGGGCAGAAAATCCTCTGGTTCTTACAGGCAGTCCTCTGTaGCAGTCATGTTTTAGTTCT +
Preference number: 5 (lower is better)
Translates to: NPGGSCGSQQRAENPLVLTGSPL*QSCFSS
Trigger: AGAACTAAAACATGACTGCAACAGAGGACTGCCTGT...AAGAACCAGAGGATTTTCTGCCCTTTGCTGGGAGCCACATGAGCCCCCTGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp CAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAGCTGGAGACGGCCACAGTaGGTTGTATTCACTTGTGTC +
Preference number: 5 (lower is better)
Translates to: QWSLRSSDHLYTSGHLPSWRRPQ*VVFTCV
Trigger: GACACAAGTGAATACAACCAACTGTGGCCGTCTCCA...GCTGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp TGGGGCACATCATTGTCCACGACAGGCAGTCCTCTGTTGCAGTCATGTTTTAGTTGGAGACGGCCACAGTaGGTTGTATTCACTTGTGTC +
Preference number: 5 (lower is better)
Translates to: WGTSLSTTGSPLLQSCFSWRRPQ*VVFTCV
Trigger: GACACAAGTGAATACAACCAACTGTGGCCGTCTCCA...ACTAAAACATGACTGCAACAGAGGACTGCCTGTCGTGGACAATGATGTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420077.5
ENST00000446927.5
CDS-3UTR CAA 90 bp GACCCCCAGCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGTACACTAGTGGTCATTaGCCCAGCTCTAGATGGATG +
Preference number: 5 (lower is better)
Translates to: DPQHLSGHSVPVITYTLVYTSGH*PSSRWM
Trigger: CATCCATCTAGAGCTGGGCAAATGACCACTAGTGTA...CACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGCTGGGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAAAATTTAGAGTAAGGTaGTGGGGCAATGGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RQRSGPKPIQAQREQILKKFRVR*WGNGER
Trigger: CCTCTCCCCATTGCCCCACAACCTTACTCTAAATTT...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGATCATTGACTGGAGCTaGAGGGGCTCAAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLIIDWS*RGSSTR
Trigger: CCTGGTGCTTGAGCCCCTCAAGCTCCAGTCAATGAT...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp AGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTAAAAACACTTAAGTGTGTCTaGAGAGTGCTGAGGATGGGT +
Preference number: 5 (lower is better)
Translates to: RQRSGPKPIQAQREQILKTLKCV*RVLRMG
Trigger: ACCCATCCTCAGCACTCTCAAGACACACTTAAGTGT...TTTTAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp GAGGCACATTCACAGGCCAAGACCAGGACTCAGCAGGAGAAGCCTAGAGCCATGTTATGGAGGAAGGAATaGGAGCTTACGTATCAAACA +
Preference number: 5 (lower is better)
Translates to: EAHSQAKTRTQQEKPRAMLWRKE*ELTYQT
Trigger: TGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAA...CATGGCTCTAGGCTTCTCCTGCTGAGTCCTGGTCTTGGCCTGTGAATGTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp CAAATACACATAGAGCTCAGCTTCCAGGGACTGGAGAAACAAGAAGGCCTCCAGGTTGGTTGTATTCACTaGTGTCACCTCAGTACGGGA +
Preference number: 5 (lower is better)
Translates to: QIHIELSFQGLEKQEGLQVGCIH*CHLSTG
Trigger: TCCCGTACTGAGGTGACACAAGTGAATACAACCAAC...CTGGAGGCCTTCTTGTTTCTCCAGTCCCTGGAAGCTGAGCTCTATGTGTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp GCATCTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGATGCCCATGCTGAGCTaGGAGAACATGGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: ASQWSLRSSDHLYTSGHLMPMLS*ENMARP
Trigger: TGGTCTTGCCATGTTCTCCAAGCTCAGCATGGGCAT...CAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp CATTCTATACAAAGGGATCTCAGGCCACTAAGGTCAGACAGGTCTGAGGATTACCCCAAGGGGACTCTTTaGAGTAGTTCACAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: HSIQRDLRPLRSDRSEDYPKGTL*SSSQAA
Trigger: AGCAGCCTGTGAACTACTCAAAAGAGTCCCCTTGGG...GTAATCCTCAGACCTGTCTGACCTTAGTGGCCTGAGATCCCTTTGTATAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTCCCAAGGGGACTCTTTaGAGTAGTTCACAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRPKGTL*SSSQAA
Trigger: AGCAGCCTGTGAACTACTCAAAAGAGTCCCCTTGGG...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp ACAAAGAAAAGGATGGGGTCATGTGTACTGCTGCCCTTCCCACCCGGAAGGTCATTATTGTGGTTTCCATaGGAAGGAATGACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: TKKRMGSCVLLPFPPGRSLLWFP*EGMTEA
Trigger: TGCCTCAGTCATTCCTTCCAATGGAAACCACAATAA...TGACCTTCCGGGTGGGAAGGGCAGCAGTACACATGACCCCATCCTTTTCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp CGTCCTCGTGTTTTGGGCTGGCATAAAGTTCAGATGAACCCATGTGAGGTGATTATTAGTGGCCCTTACTaGACAGACATGCAACGTGCC +
Preference number: 5 (lower is better)
Translates to: RPRVLGWHKVQMNPCEVIISGPY*TDMQRA
Trigger: GGCACGTTGCATGTCTGTCAAGTAAGGGCCACTAAT...AATCACCTCACATGGGTTCATCTGAACTTTATGCCAGCCCAAAACACGAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp CTTCTTATGGAGGAAGGAATTGGAGCTTACGTATCAAACACACTTAAGTGTGTCGGTCTTGGCTGTAGCTaGTGGTCCCAGAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: LLMEEGIGAYVSNTLKCVGLGCS*WSQKVE
Trigger: CTCCACCTTCTGGGACCACAAGCTACAGCCAAGACC...GACACACTTAAGTGTGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCATACACTAGTGGTCATTaGCCCAGCTCTAGATGGATG +
Preference number: 5 (lower is better)
Translates to: LSGHSVPVITYTLVVICPYTSGH*PSSRWM
Trigger: CATCCATCTAGAGCTGGGCAAATGACCACTAGTGTA...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp ATCAGGCAAAGGTCTGGCCCCAAGCCCATCCAGGCTCAGAGAGAACAGATACTATTATGGAGGAAGGAATaGGAGCTTACGTATCAAACA +
Preference number: 5 (lower is better)
Translates to: IRQRSGPKPIQAQREQILLWRKE*ELTYQT
Trigger: TGTTTGATACGTAAGCTCCAATTCCTTCCTCCATAA...TAGTATCTGTTCTCTCTGAGCCTGGATGGGCTTGGGGCCAGACCTTTGCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp CTCAGTGGTCACTCCGTTCCAGTGATCACTTATACACTAGTGGTCATTTGCCCAACAGGCAGTCCTCTGTaGCAGTCATGTTTTAGTTCT +
Preference number: 5 (lower is better)
Translates to: LSGHSVPVITYTLVVICPTGSPL*QSCFSS
Trigger: AGAACTAAAACATGACTGCAACAGAGGACTGCCTGT...TGGGCAAATGACCACTAGTGTATAAGTGATCACTGGAACGGAGTGACCACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTACAGGCAGTCCTCTGTaGCAGTCATGTTTTAGTTCT +
Preference number: 5 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISTGSPL*QSCFSS
Trigger: AGAACTAAAACATGACTGCAACAGAGGACTGCCTGT...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357877.7
ENST00000446927.5
ENST00000611975.4
CDS-3UTR CAA 90 bp GAAAGCCACTTCTGCCTTCTCTCTTCTTATGGAGGAAGGAATTGGAGCTTACGTTTATTGTGGTTTCCATaGGAAGGAATGACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: ESHFCLLSSYGGRNWSLRLLWFP*EGMTEA
Trigger: TGCCTCAGTCATTCCTTCCAATGGAAACCACAATAA...ACGTAAGCTCCAATTCCTTCCTCCATAAGAAGAGAGAAGGCAGAAGTGGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS-3UTR CAA 90 bp GTTCAGATGTTAGGGGGAAGCCCTGATTTGCTGCAGAAAGCAGTTCTGATTTCTCATCTGATGAGATATTaGATCTCAGCCATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VQMLGGSPDLLQKAVLISHLMRY*ISAIFR
Trigger: CCTGAAGATGGCTGAGATCAAATATCTCATCAGATG...AGAAATCAGAACTGCTTTCTGCAGCAAATCAGGGCTTCCCCCTAACATCTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000611975.4
CDS CAA 90 bp GCTGCCCGGGACCCGGGCGGGGCCGCGCAGCAGAGGCCGGCATCTTaGGCTCCGCCTGGCCGCGGGTGCGGCGCAAGCTACGGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: AARDPGGAAQQRPAS*APPGRGCGASYGLC
Trigger: GCAGAGGCCGTAGCTTGCGCCGCACCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCTGCTGCGCGGCCCCGCCCGGGTCCCGGGCAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000416236.5
ENST00000420077.5
ENST00000434486.5
ENST00000453930.5
ENST00000458114.5
ENST00000611975.4
CDS CCA 72 bp ACCCGGGCGGGGCCGCGCAGCAGAGGCCGGCATCTTTaGCTCCGCCTGGCCGCGGGTGCGGCGCAAGCTACG +
Preference number: 6 (lower is better)
Translates to: TRAGPRSRGRHL*LRLAAGAAQAT
Trigger: CGTAGCTTGCGCCGCACCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCTGCTGCGCGGCCCCGCCCGGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000416236.5
ENST00000420077.5
ENST00000434486.5
ENST00000453930.5
ENST00000458114.5
ENST00000611975.4
CDS GCA 72 bp CAGAGGCCGGCATCTTTGGCTCCGCCTGGCCGCGGGTaGGGCGCAAGCTACGGCCTCTGCTCAGGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: QRPASLAPPGRG*GASYGLCSGPR
Trigger: CCGGGGCCCTGAGCAGAGGCCGTAGCTTGCGCCGCACCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000416236.5
ENST00000420077.5
ENST00000434486.5
ENST00000453930.5
ENST00000458114.5
ENST00000611975.4
CDS CCA 72 bp GGCCGCGCAGCAGAGGCCGGCATCTTTGGCTCCGCCTaGCCGCGGGTGCGGCGCAAGCTACGGCCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: GRAAEAGIFGSA*PRVRRKLRPLL
Trigger: GAGCAGAGGCCGTAGCTTGCGCCGCACCCGCGGCCAGGCGGAGCCAAAGATGCCGGCCTCTGCTGCGCGGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000416236.5
ENST00000420077.5
ENST00000434486.5
ENST00000453930.5
ENST00000458114.5
ENST00000611975.4
CDS CCA 72 bp GACAGGAGTCAGCCTCAGAGATTGGAAGCGAGGTTCTaGGCACCGAGCGGGGGACGCGGCCGGATACCGGGC +
Preference number: 6 (lower is better)
Translates to: DRSQPQRLEARF*APSGGRGRIPG
Trigger: GCCCGGTATCCGGCCGCGTCCCCCGCTCGGTGCCCAGAACCTCGCTTCCAATCTCTGAGGCTGACTCCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000420077.5
ENST00000434486.5
ENST00000446927.5
ENST00000453930.5
ENST00000611975.4
CDS CCA 72 bp AACCATCCAGTCAATCAGAGATTGGAAGCGAGGTTCTaGGCACCGAGCGGGGGACGCGGCCGGATACCGGGC +
Preference number: 6 (lower is better)
Translates to: NHPVNQRLEARF*APSGGRGRIPG
Trigger: GCCCGGTATCCGGCCGCGTCCCCCGCTCGGTGCCCAGAACCTCGCTTCCAATCTCTGATTGACTGGATGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458114.5
CDS CCA 72 bp TCGGTGGAGGTGTCCATCCTCTCTCCAGGTCTGGGCTaGGGCACATCATTGTCCACGACAGGCAGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: SVEVSILSPGLG*GTSLSTTGSPL
Trigger: CAGAGGACTGCCTGTCGTGGACAATGATGTGCCCCAGCCCAGACCTGGAGAGAGGATGGACACCTCCACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473350.1
CDS GCA 72 bp ATCTTCAAGAACGCTGAGCTGAGCTCCGATCCGCACTaGTCGGTGGAGGTGTCCATCCTCTCTCCAGGTCTG +
Preference number: 6 (lower is better)
Translates to: IFKNAELSSDPH*SVEVSILSPGL
Trigger: CAGACCTGGAGAGAGGATGGACACCTCCACCGAGCAGTGCGGATCGGAGCTCAGCTCAGCGTTCTTGAAGAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473350.1
CDS TCA 72 bp CCCCGCACTTCGGATCAAAAGCGAAGGTGCCACAAGTaGGGAGGTGAGAGGCATTGGCAATGGCGAGAATCT +
Preference number: 6 (lower is better)
Translates to: PRTSDQKRRCHK*GGERHWQWRES
Trigger: AGATTCTCGCCATTGCCAATGCCTCTCACCTCCTCACTTGTGGCACCTTCGCTTTTGATCCGAAGTGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000420077.5
CDS TCA 72 bp CAGAGTAATTGTATGTGTGAGGGACTGCGAACCGGGTaGGACAGGAGTCAGCCTCAGAGATTGGAAGCGAGG +
Preference number: 6 (lower is better)
Translates to: QSNCMCEGLRTG*DRSQPQRLEAR
Trigger: CCTCGCTTCCAATCTCTGAGGCTGACTCCTGTCTCACCCGGTTCGCAGTCCCTCACACATACAATTACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339773.9
ENST00000357877.7
ENST00000420077.5
ENST00000434486.5
ENST00000446927.5
ENST00000453930.5
ENST00000611975.4
CDS GCA 72 bp GGACATTTCCCCCGGCCACTCTCAAGTCTTTCAACCTaGTGGAACCTGGACACATCAATAACCCCGCACTTC +
Preference number: 6 (lower is better)
Translates to: GHFPRPLSSLST*WNLDTSITPHF
Trigger: GAAGTGCGGGGTTATTGATGTGTCCAGGTTCCAGCAGGTTGAAAGACTTGAGAGTGGCCGGGGGAAATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357877.7
CDS GCA 72 bp GGACATTTCCCCCGGCCACTCTCAAGTCTTTCAACCTaGTGGAACCTGGACACATCCTCTTTCTTGCCTTTC +
Preference number: 6 (lower is better)
Translates to: GHFPRPLSSLST*WNLDTSSFLPF
Trigger: GAAAGGCAAGAAAGAGGATGTGTCCAGGTTCCAGCAGGTTGAAAGACTTGAGAGTGGCCGGGGGAAATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434486.5
ENST00000611975.4
CDS CCA 72 bp CATTTCCCCCGGCCACTCTCAAGTCTTTCAACCTGCTaGAACCTGGACACATCCTCTTTCTTGCCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: HFPRPLSSLSTC*NLDTSSFLPFF
Trigger: GAAGAAAGGCAAGAAAGAGGATGTGTCCAGGTTCCAGCAGGTTGAAAGACTTGAGAGTGGCCGGGGGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434486.5
ENST00000611975.4
CDS TCA 72 bp TTCGGATCAAAAGCGAAGGTGCCACAAGTGAGGAGGTaGGAGGCATTGGCAATGGCGAGAATCTGGACAAAA +
Preference number: 6 (lower is better)
Translates to: FGSKAKVPQVRR*EALAMARIWTK
Trigger: TTTTGTCCAGATTCTCGCCATTGCCAATGCCTCTCACCTCCTCACTTGTGGCACCTTCGCTTTTGATCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357877.7
ENST00000420077.5