RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEMA4D (Homo sapiens)

Ensembl gene IDs: ENSG00000187764

Ensembl transcript IDs: ENST00000339861.8, ENST00000356444.6, ENST00000418828.1, ENST00000420101.6, ENST00000420670.5, ENST00000420681.6, ENST00000420987.5, ENST00000422704.7, ENST00000429836.5, ENST00000433650.5, ENST00000438547.6, ENST00000450295.5, ENST00000455551.6, ENST00000464051.1, ENST00000469653.5, ENST00000474258.1, ENST00000475255.5, ENST00000482128.1, ENST00000486935.2, ENST00000492386.5, ENST00000537934.5, ENST00000540183.1, ENST00000540475.5, ENST00000544513.1

Found 2092 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCCTGGTCACTCAGGAAGGGCGGCAGCAAGGAGACCCTCGAGCTaGTGTCGGGCCCCGCACCCGAGGCTGGCCAGGGGGTCCAGGGAG +
Preference number: 1 (lower is better)
Translates to: VPGHSGRAAARRPSS*CRAPHPRLARGSRE
Trigger: CTCCCTGGACCCCCTGGCCAGCCTCGGGTGCGGGGCCCGACAGCAGCTCGAGGGTCTCCTTGCTGCCGCCCTTCCTGAGTGACCAGGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR CCA 90 bp CTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTaGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCC +
Preference number: 1 (lower is better)
Translates to: LQDSGRNSAVCLRVL*SQLAAPATEAQFPS
Trigger: GGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR TCA 90 bp CCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTaGGGGTGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCC +
Preference number: 1 (lower is better)
Translates to: PIHIFRTVAGTAPYA*GCCGHSSRPRPPRP
Trigger: GGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR GCA 90 bp ACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATaGTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAG +
Preference number: 1 (lower is better)
Translates to: TTHSHLQDSGRNSAV*LRVLWSQLAAPATE
Trigger: CTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR GCA 90 bp GAGCGAGCCCAGCTGTCCCGCCTGGGCCATGCAGGGGCGGGAGGCTaGACAGCCTCCGCTAAGGAATGTCTTCCCCAAATCAAGGATAGA +
Preference number: 1 (lower is better)
Translates to: ERAQLSRLGHAGAGG*TASAKECLPQIKDR
Trigger: TCTATCCTTGATTTGGGGAAGACATTCCTTAGCGGAGGCTGTGCAGCCTCCCGCCCCTGCATGGCCCAGGCGGGACAGCTGGGCTCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR CCA 90 bp CTGGCATCCTTGGCTGGATGGGCAAGCACACACCTCACAGGCAGCTaGGCCTCTCGACTTGGGGTGCGGAGGGGGAACGTGTGGAGACAA +
Preference number: 1 (lower is better)
Translates to: LASLAGWASTHLTGS*ASRLGVRRGNVWRQ
Trigger: TTGTCTCCACACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCCAGCTGCCTGTGAGGTGTGTGCTTGCCCATCCAGCCAAGGATGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR GCA 90 bp GTCACAGGCCCACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTaGCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTG +
Preference number: 1 (lower is better)
Translates to: VTGPLGFQASPLSRL*PSGGGPMAVFRAGL
Trigger: CAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTGGGCCTGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR CCA 90 bp CGAGACTCGGATACTGAACAGGAGAAACACAAAACTCTCCACGCCTaGACACGTCGCAGCCGAGGCACCAGCGGGGATGCACAGCCGGCC +
Preference number: 1 (lower is better)
Translates to: RDSDTEQEKHKTLHA*TRRSRGTSGDAQPA
Trigger: GGCCGGCTGTGCATCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTCAGTATCCGAGTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 90 bp ACAGGCAGCTGGGCCTCTCGACTTGGGGTGCGGAGGGGGAACGTGTaGAGACAACCAGGGTGTCTCCAGCATCTTCAGGACACCTGTTGT +
Preference number: 1 (lower is better)
Translates to: TGSWASRLGVRRGNV*RQPGCLQHLQDTCC
Trigger: ACAACAGGTGTCCTGAAGATGCTGGAGACACCCTGGTTGTCTCCACACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCCAGCTGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR CCA 90 bp TGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTaGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCA +
Preference number: 1 (lower is better)
Translates to: WVPGFSTVPPLPIRW*PNGCVQSRLGQDSS
Trigger: TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR CCA 90 bp ACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTaGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGT +
Preference number: 1 (lower is better)
Translates to: TWVPGFSTVPPLPIR*WPNGCVQSRLGQDS
Trigger: ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR CCA 90 bp GGGCTCCAGATTGTACCGCACTCCCATCTCAGCTCTGGGCCAGCCTaGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACC +
Preference number: 1 (lower is better)
Translates to: GLQIVPHSHLSSGPA*LHSAHPGYLPLLKT
Trigger: GGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAGAGCTGAGATGGGAGTGCGGTACAATCTGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR GCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTaGTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGA +
Preference number: 1 (lower is better)
Translates to: LGQPGSTQLIQATFP*SKPTSWMWEGPLLR
Trigger: TCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 90 bp AGGGTCTTGTTGGGGTTGAGGTCGGTGTCAGGGACTCCTTCCTGGTaGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCA +
Preference number: 1 (lower is better)
Translates to: RVLLGLRSVSGTPSW*LQGVLATAFPRLPP
Trigger: TGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCGACCTCAACCCCAACAAGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR CCA 90 bp AGCAGGGTCTTGTTGGGGTTGAGGTCGGTGTCAGGGACTCCTTCCTaGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCT +
Preference number: 1 (lower is better)
Translates to: SRVLLGLRSVSGTPS*WLQGVLATAFPRLP
Trigger: AGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCGACCTCAACCCCAACAAGACCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR CCA 90 bp TGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGACAGCTGTaGGCTCCAGATTGTACCGCACTCCCATCTCAGCTCTGGGCCAGC +
Preference number: 1 (lower is better)
Translates to: CEGSICLTGGSDRQL*APDCTALPSQLWAS
Trigger: GCTGGCCCAGAGCTGAGATGGGAGTGCGGTACAATCTGGAGCCCACAGCTGTCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR TCA 90 bp AGTGGCTTCACACTGTCTACAGTTTCCCTCGGGATGGACCCACAATaGAAGCGTGAAACGGCTCAACCCGAGGGACGCAGCCAGGACAGA +
Preference number: 1 (lower is better)
Translates to: SGFTLSTVSLGMDPQ*KRETAQPEGRSQDR
Trigger: TCTGTCCTGGCTGCGTCCCTCGGGTTGAGCCGTTTCACGCTTTCATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGTGAAGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR TCA 90 bp CACACTGTCTACAGTTTCCCTCGGGATGGACCCACAATGAAAGCGTaGAACGGCTCAACCCGAGGGACGCAGCCAGGACAGATAAGGAAG +
Preference number: 1 (lower is better)
Translates to: HTVYSFPRDGPTMKA*NGSTRGTQPGQIRK
Trigger: CTTCCTTATCTGTCCTGGCTGCGTCCCTCGGGTTGAGCCGTTTCACGCTTTCATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR GCA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTaGACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCT +
Preference number: 1 (lower is better)
Translates to: RISLQSLLPDRRGGT*THPAVLVHEQLSKP
Trigger: AGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR TCA 90 bp TCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCCGACTaGCTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCC +
Preference number: 1 (lower is better)
Translates to: SGTPCRPWAFFKYSD*LRNTRLGCNACHFS
Trigger: GGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 90 bp TGTACACTAGAAGTGGCTTCACACTGTCTACAGTTTCCCTCGGGATaGACCCACAATGAAAGCGTGAAACGGCTCAACCCGAGGGACGCA +
Preference number: 1 (lower is better)
Translates to: CTLEVASHCLQFPSG*THNESVKRLNPRDA
Trigger: TGCGTCCCTCGGGTTGAGCCGTTTCACGCTTTCATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGTGAAGCCACTTCTAGTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR CCA 90 bp GGAGTCTCACCTTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTTaGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTTGATTTGCATC +
Preference number: 1 (lower is better)
Translates to: GVSPFLVPVMHLGVP*LSLQGGEAAGLICI
Trigger: GATGCAAATCAAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAAGGTGAGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR CCA 90 bp ATTTCCATGTGGAGTCTCACCTTTTCTTGTCCCAGTCATGCATCTTaGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTT +
Preference number: 1 (lower is better)
Translates to: ISMWSLTFSCPSHAS*SSLAKSAGRRSSRL
Trigger: AAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAAGGTGAGACTCCACATGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR TCA 90 bp CCTATTTGGCTTTCTGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTaGGCATTGACGGGACAGAGGCATAAACTGCAGCGCTTGATAAAA +
Preference number: 1 (lower is better)
Translates to: PIWLSASSLVSCCRS*ALTGQRHKLQRLIK
Trigger: TTTTATCAAGCGCTGCAGTTTATGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCAGAAAGCCAAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR TCA 90 bp ATATTTTACAGGAAAACTTCAGGTTATGAGTATGTGATGGTTCCGTaGGCAAGACTGGCATCCTTGGCTGGATGGGCAAGCACACACCTC +
Preference number: 1 (lower is better)
Translates to: IFYRKTSGYEYVMVP*ARLASLAGWASTHL
Trigger: GAGGTGTGTGCTTGCCCATCCAGCCAAGGATGCCAGTCTTGCTCACGGAACCATCACATACTCATAACCTGAAGTTTTCCTGTAAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR TCA 90 bp GGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTGTTaGAATCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAAC +
Preference number: 1 (lower is better)
Translates to: GYLQSGEMECEINQC*NRTTHSHLQDSGRN
Trigger: GTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGATTTCAACACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR GCA 90 bp CTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATaGTTGTCATTTTTCCAAAAGGACAAAGAGAAACCAAGTCACAGG +
Preference number: 1 (lower is better)
Translates to: LQVLRLTSEHKTGMQ*LSFFQKDKEKPSHR
Trigger: CCTGTGACTTGGTTTCTCTTTGTCCTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR TCA 90 bp ATAAGCCTAAAGCCCATAGCATTTCACTCATCAGTTTGTAGTGGTTaGAGCCACACCCAAAGCAAGAACCACAGTGAGCTGATGGATATT +
Preference number: 1 (lower is better)
Translates to: ISLKPIAFHSSVCSG*SHTQSKNHSELMDI
Trigger: AATATCCATCAGCTCACTGTGGTTCTTGCTTTGGGTGTGGCTTCAACCACTACAAACTGATGAGTGAAATGCTATGGGCTTTAGGCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR TCA 90 bp AATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTaGCAGATGCACTCCCAGATCGCATCTCACAGTCATTCAAGGTTT +
Preference number: 1 (lower is better)
Translates to: NRAQYSEVSEENTKT*QMHSQIASHSHSRF
Trigger: AAACCTTGAATGACTGTGAGATGCGATCTGGGAGTGCATCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR TCA 90 bp TGTCATTCAACAGACAAGAAGAGACGTGTGTGTAAGATTAAAGGCTaGGTAGCTTTAGGACAAGTTCACACACACAGTGACACAGTCTTC +
Preference number: 1 (lower is better)
Translates to: CHSTDKKRRVCKIKG*VALGQVHTHSDTVF
Trigger: GAAGACTGTGTCACTGTGTGTGTGAACTTGTCCTAAAGCTACTCAGCCTTTAATCTTACACACACGTCTCTTCTTGTCTGTTGAATGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR TCA 90 bp TTTGTAGTGGTTGAAGCCACACCCAAAGCAAGAACCACAGTGAGCTaGTGGATATTTTACAGGAAAACTTCAGGTTATGAGTATGTGATG +
Preference number: 1 (lower is better)
Translates to: FVVVEATPKARTTVS*WIFYRKTSGYEYVM
Trigger: CATCACATACTCATAACCTGAAGTTTTCCTGTAAAATATCCATCAGCTCACTGTGGTTCTTGCTTTGGGTGTGGCTTCAACCACTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR TCA 90 bp TCCATCGTCAAGAAATTTAATATGGCACCAGGAGATTTGCATAATTaGCCTATTTGGCTTTCTGCATCAAGTTTGGTGTCCTGTTGCAGA +
Preference number: 1 (lower is better)
Translates to: SIVKKFNMAPGDLHN*PIWLSASSLVSCCR
Trigger: TCTGCAACAGGACACCAAACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATATTAAATTTCTTGACGATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR GCA 90 bp CTTATAAAACACAAATGTTTACACCAAAATGGTCAAATCCTATCATaGTGGAAGATAAGACTGTCCACACACGCGCACAAACATCCAGAG +
Preference number: 1 (lower is better)
Translates to: LIKHKCLHQNGQILS*WKIRLSTHAHKHPE
Trigger: CTCTGGATGTTTGTGCGCGTGTGTGGACAGTCTTATCTTCCAGCATGATAGGATTTGACCATTTTGGTGTAAACATTTGTGTTTTATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR GCA 90 bp AGACTCATTCCATCGTCAAGAAATTTAATATGGCACCAGGAGATTTaGATAATTGACCTATTTGGCTTTCTGCATCAAGTTTGGTGTCCT +
Preference number: 1 (lower is better)
Translates to: RLIPSSRNLIWHQEI*IIDLFGFLHQVWCP
Trigger: AGGACACCAAACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATATTAAATTTCTTGACGATGGAATGAGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR CCA 90 bp ATAAAACACAAATGTTTACACCAAAATGGTCAAATCCTATCATGCTaGAAGATAAGACTGTCCACACACGCGCACAAACATCCAGAGTTT +
Preference number: 1 (lower is better)
Translates to: IKHKCLHQNGQILSC*KIRLSTHAHKHPEF
Trigger: AAACTCTGGATGTTTGTGCGCGTGTGTGGACAGTCTTATCTTCCAGCATGATAGGATTTGACCATTTTGGTGTAAACATTTGTGTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 90 bp AACAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATaGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCAT +
Preference number: 1 (lower is better)
Translates to: NKTLMRLIPSSRNLI*HQEICIIDLFGFLH
Trigger: ATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR GCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGGGCTCAGGAACTCCGTaGCGCCCGTGGGCCTTCTTC +
Preference number: 2 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPGSGTP*RPWAFF
Trigger: GAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCC...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CAA 90 bp CTGGATGGGCAAGCACACACCTCACAGGCAGCTGGGCCTCTCGACTaGGGGTGCGGAGGGGGAACGTGTGGAGACAACCAGGGTGTCTCC +
Preference number: 2 (lower is better)
Translates to: LDGQAHTSQAAGPLD*GCGGGTCGDNQGVS
Trigger: GGAGACACCCTGGTTGTCTCCACACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCCAGCTGCCTGTGAGGTGTGTGCTTGCCCATCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR CAA 90 bp ACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTaGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCC +
Preference number: 2 (lower is better)
Translates to: THSHLQDSGRNSAVC*RVLWSQLAAPATEA
Trigger: GGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTCCGGGGGTGGCTGTaGTCAGTGGCAGCAGGGTCT +
Preference number: 2 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRLRGWL*SVAAGS
Trigger: AGACCCTGCTGCCACTGACCACAGCCACCCCCGGAG...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp CTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCTCCGGGGGTGGCTGTaGTCAGTGGCAGCAGGGTCT +
Preference number: 2 (lower is better)
Translates to: LHCPASAHQVVAQWLCSELRGWL*SVAAGS
Trigger: AGACCCTGCTGCCACTGACCACAGCCACCCCCGGAG...CTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp GCCCACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGGTGGCTGTGGTCAGTaGCAGCAGGGTCTTGTTGGG +
Preference number: 2 (lower is better)
Translates to: AHLGSRLLHCPASAHQVVGGCGQ*QQGLVG
Trigger: CCCAACAAGACCCTGCTGCCACTGACCACAGCCACC...CACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp CTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACCTCCGGGGGTGGCTGTaGTCAGTGGCAGCAGGGTCT +
Preference number: 2 (lower is better)
Translates to: LPIRWWPNGCVQSRLGQDLRGWL*SVAAGS
Trigger: AGACCCTGCTGCCACTGACCACAGCCACCCCCGGAG...GTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
3UTR-3UTR CCA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCGGCCTTCTCCGGGGGTaGCTGTGGTCAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: GALCQGESLGRCRISLQSGLLRG*LWSVAA
Trigger: TGCTGCCACTGACCACAGCCACCCCCGGAGAAGGCC...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp CAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACGGCCTTCTCCGGGGGTaGCTGTGGTCAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: QGESLGRCRISLQSLLPDGLLRG*LWSVAA
Trigger: TGCTGCCACTGACCACAGCCACCCCCGGAGAAGGCC...GTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCACTCCGTGCCGCCCGTaGGCCTTCTTCAAGTACTCC +
Preference number: 2 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAATPCRP*AFFKYS
Trigger: GGAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGT...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR TCA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGGGGTCTTGTTGGGGTTaGGGTCGGTGTCAGGGACTC +
Preference number: 2 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRGSCWG*GRCQGL
Trigger: GAGTCCCTGACACCGACCTCAACCCCAACAAGACCC...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGAGGACTGAGGTTGTCTaGACGATGCGGGCTAACCTA +
Preference number: 2 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPRTEVV*TMRANL
Trigger: TAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCT...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTAGGGAAGCTGAAGGGATaGTCTTCTCAGCCAACAGAG +
Preference number: 2 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVGKLKG*SSQPTE
Trigger: CTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTCCC...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp GAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGCCTTCTCCGGGGGTaGCTGTGGTCAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: ESLGRCRISLQSLLPDRRGLLRG*LWSVAA
Trigger: TGCTGCCACTGACCACAGCCACCCCCGGAGAAGGCC...TCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR TCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTAAATAGACAAGAGGACTaGGGTTGTCTGCACGATGCG +
Preference number: 2 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVNRQED*GCLHDA
Trigger: CGCATCGTGCAGACAACCTCAGTCCTCTTGTCTATT...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR TCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCAAAGGCGCCCTTGTaGAGGTTCCATCTGTCTCAC +
Preference number: 2 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAPKAPL*RFHLSH
Trigger: GTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGG...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTCCACTGTCCCGCCTCTaGCCATCAGGTGGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPPLSRL*PSGGGP
Trigger: TGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGG...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTTCAGCCTTCAGAGCCTaGTGCCTGACCGTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: GESLGRCRISLQSLLPDRSAFRA*CLTVEE
Trigger: CTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGA...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp AGAAGTTCCCCAGGGCGTGCACGTGCTGTGCCTGGTCACTCAGGAAGGGCGGCAAGGAACAGCGCCGTATaGTTGAGGGTGCTGTGGTCA +
Preference number: 2 (lower is better)
Translates to: RSSPGRARAVPGHSGRAARNSAV*LRVLWS
Trigger: TGACCACAGCACCCTCAAGCATACGGCGCTGTTCCT...TGCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGGGAACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR-3UTR GCA 90 bp CGGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCTGCATCATCCGGTCGTaGTCCCCAGCCACAGCCCTC +
Preference number: 2 (lower is better)
Translates to: RCQGLLPGGYRVSLLQLSCIIRS*SPATAL
Trigger: GAGGGCTGTGGCTGGGGAGCACGACCGGATGATGCA...GGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR-3UTR CCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTGGCCTTCTCCGGGGGTaGCTGTGGTCAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPGLLRG*LWSVAA
Trigger: TGCTGCCACTGACCACAGCCACCCCCGGAGAAGGCC...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
3UTR-3UTR CCA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGCTGCCCATCAGGTGGTaGCCCAATGGCTGTGTTCAG +
Preference number: 2 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQLPIRW*PNGCVQ
Trigger: CTGAACACAGCCATTGGGCCACCACCTGATGGGCAG...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCCTCTGCCCATCAGGTaGTGGCCCAATGGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRPLPIR*WPNGCV
Trigger: AACACAGCCATTGGGCCACCACCTGATGGGCAGAGG...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR TCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCGGGTCTTGTTGGGGTTaGGGTCGGTGTCAGGGACTC +
Preference number: 2 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCGSCWG*GRCQGL
Trigger: GAGTCCCTGACACCGACCTCAACCCCAACAAGACCC...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCCAGGCTACCTTCCCTTaGTCAAAACCCACCTCGTGG +
Preference number: 2 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARQATFP*SKPTSW
Trigger: CCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTG...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGTGCATCATCCGGTCGTaGTCCCCAGCCACAGCCCTC +
Preference number: 2 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQCIIRS*SPATAL
Trigger: GAGGGCTGTGGCTGGGGAGCACGACCGGATGATGCA...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR-3UTR CCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGAGGTGGCTGTGGTCAGTaGCAGCAGGGTCTTGTTGGG +
Preference number: 2 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARGGCGQ*QQGLVG
Trigger: CCCAACAAGACCCTGCTGCCACTGACCACAGCCACC...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
3UTR-3UTR CCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGCTCCGGGGGTGGCTGTaGTCAGTGGCAGCAGGGTCT +
Preference number: 2 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVLRGWL*SVAAGS
Trigger: AGACCCTGCTGCCACTGACCACAGCCACCCCCGGAG...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
3UTR-3UTR CCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGCCTTCTCCGGGGGTaGCTGTGGTCAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCGLLRG*LWSVAA
Trigger: TGCTGCCACTGACCACAGCCACCCCCGGAGAAGGCC...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
3UTR-3UTR CCA 90 bp GGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTACAGGTGGTGGCCCAATaGCTGTGTTCAGAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: GSHWDGVGSAFRACCLTVQVVAQ*LCSEQA
Trigger: AGCCTGCTCTGAACACAGCCATTGGGCCACCACCTG...TACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCCAGGTGGTGGCCCAATaGCTGTGTTCAGAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTQVVAQ*LCSEQA
Trigger: AGCCTGCTCTGAACACAGCCATTGGGCCACCACCTG...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp GGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTACTGCCCATCAGGTGGTaGCCCAATGGCTGTGTTCAG +
Preference number: 2 (lower is better)
Translates to: GSHWDGVGSAFRACCLTVLPIRW*PNGCVQ
Trigger: CTGAACACAGCCATTGGGCCACCACCTGATGGGCAG...TACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTCCTCTGCCCATCAGGTaGTGGCCCAATGGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPAPLPIR*WPNGCV
Trigger: AACACAGCCATTGGGCCACCACCTGATGGGCAGAGG...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGTGTCACAGGCCCACTTaGGTTCCAGGCTTCTCCACT +
Preference number: 2 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQCHRPT*VPGFST
Trigger: AGTGGAGAAGCCTGGAACCCAAGTGGGCCTGTGACA...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTTGTCACAGGCCCACTTaGGTTCCAGGCTTCTCCACT +
Preference number: 2 (lower is better)
Translates to: GESLGRCRISLQSLLPDRCHRPT*VPGFST
Trigger: AGTGGAGAAGCCTGGAACCCAAGTGGGCCTGTGACA...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCTTGGCTATTAGGGGGTaGGGGCACTCTGTCAAGGGG +
Preference number: 2 (lower is better)
Translates to: GALCQGESLGRCRISLQSLAIRG*GHSVKG
Trigger: CCCCTTGACAGAGTGCCCCCACCCCCTAATAGCCAA...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp GGGCCTCTCGACTTGGGGTGCGGAGGGGGAACGTGTGGAGACAACCAGGGTGTCCATCTTGGAGTTCCTTaGCTAAGTCTGCAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: GPLDLGCGGGTCGDNQGVHLGVP*LSLQGG
Trigger: TCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATG...GACACCCTGGTTGTCTCCACACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR CCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAAAAAACTCTCCACGCCTaGACACGTCGCAGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKKTLHA*TRRSRG
Trigger: GCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTT...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCCCCACCTCGTGGATGTaGGAAGGTCCTCTTCTTCGA +
Preference number: 2 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARPTSWM*EGPLLR
Trigger: TCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGG...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp CGGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCAGGCAGAGAGCTCTCTaGTCCACCTCTCCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: RCQGLLPGGYRVSLLQLSRQRAL*STSPGG
Trigger: CCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCT...GGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR-3UTR CCA 90 bp AGGGTCTTGTTGGGGTTGAGGTCGGTGTCAGGGACTCCTTCCTGGTGGCTACAGAGGCAGAGAGCTCTCTaGTCCACCTCTCCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: RVLLGLRSVSGTPSWWLQRQRAL*STSPGG
Trigger: CCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCT...CTGTAGCCACCAGGAAGGAGTCCCTGACACCGACCTCAACCCCAACAAGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR CAA 90 bp TCTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTaGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCG +
Preference number: 2 (lower is better)
Translates to: SGPAWLHSAHPGYLP*LKTHLVDVGRSSSS
Trigger: CGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGGAAGCTGAAGGGATaGTCTTCTCAGCCAACAGAG +
Preference number: 2 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARGKLKG*SSQPTE
Trigger: CTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTCCC...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTGCCTTCCTCCAGCTCTaGATCATCCGGTCGTGCTCC +
Preference number: 2 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPAFLQL*IIRSCS
Trigger: GGAGCACGACCGGATGATGCAGAGCTGGAGGAAGGC...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR-3UTR CCA 90 bp CGATCTGTGCTGGCCATGCTAACCCTGTTGGCTATTAGGGGGTGGGGGCACTCTCTGCCCATCAGGTGGTaGCCCAATGGCTGTGTTCAG +
Preference number: 2 (lower is better)
Translates to: RSVLAMLTLLAIRGWGHSLPIRW*PNGCVQ
Trigger: CTGAACACAGCCATTGGGCCACCACCTGATGGGCAG...AGAGTGCCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGCCAGCACAGATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp CAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACTGTCACAGGCCCACTTaGGTTCCAGGCTTCTCCACT +
Preference number: 2 (lower is better)
Translates to: QGESLGRCRISLQSLLPDCHRPT*VPGFST
Trigger: AGTGGAGAAGCCTGGAACCCAAGTGGGCCTGTGACA...GTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGAGGTTCGTGCCAATCTaGACAACAGGCGATAAGTTA +
Preference number: 2 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPRFVPI*TTGDKL
Trigger: TAACTTATCGCCTGTTGTCCAGATTGGCACGAACCT...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp CGGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCTGGTCCACCTCTCCTaGTGGGTCACTTCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: RCQGLLPGGYRVSLLQLSLVHLS*WVTSGL
Trigger: GAGACCTGAAGTGACCCACCAGGAGAGGTGGACCAG...GGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR-3UTR CCA 90 bp CTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTGGTCCACCTCTCCTaGTGGGTCACTTCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: LPGGYRVSLLQLSHAFLQLVHLS*WVTSGL
Trigger: GAGACCTGAAGTGACCCACCAGGAGAGGTGGACCAG...CTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR-3UTR CCA 90 bp CGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCTCAGGGACTCCTTCCTaGTGGCTACAGGGTGTCCTT +
Preference number: 2 (lower is better)
Translates to: RCRISLQSLLPDRRGGTCSGTPS*WLQGVL
Trigger: AAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGA...GCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429836.5
3UTR-3UTR TCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCAGGGTCTTGTTGGGGTTaGGGTCGGTGTCAGGGACTC +
Preference number: 2 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSGSCWG*GRCQGL
Trigger: GAGTCCCTGACACCGACCTCAACCCCAACAAGACCC...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
3UTR-3UTR TCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGAATAGACAAGAGGACTaGGGTTGTCTGCACGATGCG +
Preference number: 2 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLANRQED*GCLHDA
Trigger: CGCATCGTGCAGACAACCTCAGTCCTCTTGTCTATT...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR TCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCTTCAAGTACTCCGACTaGCTTCGGAACACAAGACTG +
Preference number: 2 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAFKYSD*LRNTRL
Trigger: CAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAA...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR TCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCCGACTaGCTTCGGAACACAAGACTG +
Preference number: 2 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFFKYSD*LRNTRL
Trigger: CAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAA...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAAGGTTGTCTGCACGATaGGGGCTAACCTACGCAGCA +
Preference number: 2 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPRLSAR*GLTYAA
Trigger: TGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCT...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp TGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAATGTCACAGGCCCACTTaGGTTCCAGGCTTCTCCACT +
Preference number: 2 (lower is better)
Translates to: WDGVGSAFRACCLTVEEECHRPT*VPGFST
Trigger: AGTGGAGAAGCCTGGAACCCAAGTGGGCCTGTGACA...TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGTTCGGAACACAAGACTaGGATGCAATGCTTGTCATT +
Preference number: 2 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPFGTQD*DAMLVI
Trigger: AATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAA...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCTCAAAACCCACCTCGTaGATGTGGGAAGGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARSKPTS*MWEGPL
Trigger: AAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGA...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGGGACTCCTTCCTGGTaGCTACAGGGTGTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQGTPSW*LQGVLA
Trigger: AGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCC...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR-3UTR TCA 90 bp GTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGGGTCTTGTTGGGGTTaGGGTCGGTGTCAGGGACTC +
Preference number: 2 (lower is better)
Translates to: VPVMHLGVPWLSLQGGEAGSCWG*GRCQGL
Trigger: GAGTCCCTGACACCGACCTCAACCCCAACAAGACCC...TGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp CCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTAGGTTGTCTGCACGATaGGGGCTAACCTACGCAGCA +
Preference number: 2 (lower is better)
Translates to: PGYLPLLKTHLVDVGRSSRLSAR*GLTYAA
Trigger: TGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCT...AGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAAGGGAAGCTGAAGGGATaGTCTTCTCAGCCAACAGAG +
Preference number: 2 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKGKLKG*SSQPTE
Trigger: CTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTCCC...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCAAAACTCTCCACGCCTaGACACGTCGCAGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTKTLHA*TRRSRG
Trigger: GCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTT...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp TGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCACTGTCCCGCCTCTaGCCATCAGGTGGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: CTHPAVLVHEQLSKPVSHPLSRL*PSGGGP
Trigger: TGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGG...ATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp CTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTACCCACTGTCCCGCCTCTaGCCATCAGGTGGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: LSKPVSHPGYLLVPDRTYPLSRL*PSGGGP
Trigger: TGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGG...GTAAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCCACTGTCCCGCCTCTaGCCATCAGGTGGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYPLSRL*PSGGGP
Trigger: TGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGG...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAGGAAGAAAAGGTTCGTaGCAATCTGGACAACAGGCG +
Preference number: 2 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPGRKGS*QSGQQA
Trigger: CGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCC...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp AGAAGTTCCCCAGGGCGTGCACGTGCTGTGCCTGGTCACTCAGGAAGGGCGGCAGGTCAAATCCTATCATaGTGGAAGATAAGACTGTCC +
Preference number: 2 (lower is better)
Translates to: RSSPGRARAVPGHSGRAAGQILS*WKIRLS
Trigger: GGACAGTCTTATCTTCCAGCATGATAGGATTTGACC...TGCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGGGAACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR-3UTR GCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGCTACAGGGTGTCCTTaGTACAGCTTTCCCACGCCT +
Preference number: 2 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCATGCP*YSFPTP
Trigger: AGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGC...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR-3UTR CCA 90 bp ACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGGTGGCTGTGGTCAGTaGCAGCAGGGTCTTGTTGGG +
Preference number: 2 (lower is better)
Translates to: TSSYQSLLAILVTCLCQTGGCGQ*QQGLVG
Trigger: CCCAACAAGACCCTGCTGCCACTGACCACAGCCACC...TGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp CTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTACCTCCGGGGGTGGCTGTaGTCAGTGGCAGCAGGGTCT +
Preference number: 2 (lower is better)
Translates to: LSKPVSHPGYLLVPDRTYLRGWL*SVAAGS
Trigger: AGACCCTGCTGCCACTGACCACAGCCACCCCCGGAG...GTAAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTCCGGGGGTGGCTGTaGTCAGTGGCAGCAGGGTCT +
Preference number: 2 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYLRGWL*SVAAGS
Trigger: AGACCCTGCTGCCACTGACCACAGCCACCCCCGGAG...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTGGCCTTCTCCGGGGGTaGCTGTGGTCAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: SYQSLLAILVTCLCQTELGLLRG*LWSVAA
Trigger: TGCTGCCACTGACCACAGCCACCCCCGGAGAAGGCC...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGTGTTCAGAGCAGGCTTaGGCAAGACAGTTCACAGTT +
Preference number: 2 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKCSEQA*ARQFTV
Trigger: AACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACA...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
3UTR-3UTR CCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCTTCGGAACACAAGACTaGGATGCAATGCTTGTCATT +
Preference number: 2 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAFGTQD*DAMLVI
Trigger: AATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAA...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR TCA 90 bp TCCAGCATCTTCAGGACACCTGTTGTGATGGATCCTGAAGGAATTAGCAGGCGAGGGTCTTGTTGGGGTTaGGGTCGGTGTCAGGGACTC +
Preference number: 2 (lower is better)
Translates to: SSIFRTPVVMDPEGISRRGSCWG*GRCQGL
Trigger: GAGTCCCTGACACCGACCTCAACCCCAACAAGACCC...TCGCCTGCTAATTCCTTCAGGATCCATCACAACAGGTGTCCTGAAGATGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR TCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTCCAAAGGCGCCCTTGTaGAGGTTCCATCTGTCTCAC +
Preference number: 2 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLPKAPL*RFHLSH
Trigger: GTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGG...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCATCAGCCTTCAGAGCCTaGTGCCTGACCGTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPSAFRA*CLTVEE
Trigger: CTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGA...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp GAGCAAGACTGGCATCCTTGGCTGGATGGGCAAGCACACACCTCACAGGCAGCTCAAAGACTTGACAGATaGACTCCCAGATCGCATCTC +
Preference number: 2 (lower is better)
Translates to: EQDWHPWLDGQAHTSQAAQRLDR*TPRSHL
Trigger: GAGATGCGATCTGGGAGTGCATCTGTCAAGTCTTTG...AGCTGCCTGTGAGGTGTGTGCTTGCCCATCCAGCCAAGGATGCCAGTCTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR CCA 90 bp ACCTGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCGGTGGCTGTGGTCAGTaGCAGCAGGGTCTTGTTGGG +
Preference number: 2 (lower is better)
Translates to: TCTHPAVLVHEQLSKPVSGGCGQ*QQGLVG
Trigger: CCCAACAAGACCCTGCTGCCACTGACCACAGCCACC...GCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp TCCAGCATCTTCAGGACACCTGTTGTGATGGATCCTGAAGGAATTAGCAGGCGAGGTGGCTGTGGTCAGTaGCAGCAGGGTCTTGTTGGG +
Preference number: 2 (lower is better)
Translates to: SSIFRTPVVMDPEGISRRGGCGQ*QQGLVG
Trigger: CCCAACAAGACCCTGCTGCCACTGACCACAGCCACC...TCGCCTGCTAATTCCTTCAGGATCCATCACAACAGGTGTCCTGAAGATGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR CCA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCACAGGTGGTGGCCCAATaGCTGTGTTCAGAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEAQVVAQ*LCSEQA
Trigger: AGCCTGCTCTGAACACAGCCATTGGGCCACCACCTG...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGTCAAAACCCACCTCGTaGATGTGGGAAGGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKSKPTS*MWEGPL
Trigger: AAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGA...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAATGCTTGAGGGTGCTGTaGTCACAGCTCGCGGCCCCG +
Preference number: 2 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKCLRVL*SQLAAP
Trigger: CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCA...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR TCA 90 bp ACGTGTGGAGACAACCAGGGTGTCTCCAGCATCTTCAGGACACCTGTTGTGATGCAGAGGGGTGCGGCTTaGCTTTTAACAGAGGCTTTG +
Preference number: 2 (lower is better)
Translates to: TCGDNQGVSSIFRTPVVMQRGAA*LLTEAL
Trigger: CAAAGCCTCTGTTAAAAGTCAAGCCGCACCCCTCTG...CATCACAACAGGTGTCCTGAAGATGCTGGAGACACCCTGGTTGTCTCCACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR TCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAACGAGACTCGGATACTaGACAGGAGAAACACAAAAC +
Preference number: 2 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPTRLGY*TGETQN
Trigger: GTTTTGTGTTTCTCCTGTTCAGTATCCGAGTCTCGT...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR TCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCATTCAAGTACTCCGACTaGCTTCGGAACACAAGACTG +
Preference number: 2 (lower is better)
Translates to: EAEGMLFSANRGPATFPPFKYSD*LRNTRL
Trigger: CAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAA...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGAGGACTGAGGTTGTCTaGACGATGCGGGCTAACCTA +
Preference number: 2 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLRTEVV*TMRANL
Trigger: TAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCT...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAAGGACTGAGGTTGTCTaGACGATGCGGGCTAACCTA +
Preference number: 2 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRRTEVV*TMRANL
Trigger: TAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCT...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGGGAAGCTGAAGGGATaGTCTTCTCAGCCAACAGAG +
Preference number: 2 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLGKLKG*SSQPTE
Trigger: CTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTCCC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTTGTTCAGAGCAGGCTTaGGCAAGACAGTTCACAGTT +
Preference number: 2 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVCSEQA*ARQFTV
Trigger: AACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACA...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
3UTR-3UTR CCA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCATGTCACAGGCCCACTTaGGTTCCAGGCTTCTCCACT +
Preference number: 2 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEACHRPT*VPGFST
Trigger: AGTGGAGAAGCCTGGAACCCAAGTGGGCCTGTGACA...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp TGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTTGGCCACTGTCCCGCCTCTaGCCATCAGGTGGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: WHQEICIIDLFGFLHQVWPLSRL*PSGGGP
Trigger: TGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGG...CCAAACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTGCCTTCAGAGCCTGCTaGCTGACCGTAGAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: SYQSLLAILVTCLCQTELAFRAC*LTVEEE
Trigger: TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGC...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAGGAAGAAAAGGTTCGTaGCAATCTGGACAACAGGCG +
Preference number: 2 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRGRKGS*QSGQQA
Trigger: CGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCC...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTCAGGTGGTGGCCCAATaGCTGTGTTCAGAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: SYQSLLAILVTCLCQTELQVVAQ*LCSEQA
Trigger: AGCCTGCTCTGAACACAGCCATTGGGCCACCACCTG...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp ACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTCTGCCCATCAGGTGGTaGCCCAATGGCTGTGTTCAG +
Preference number: 2 (lower is better)
Translates to: THPAVLVHEQLSKPVSHPLPIRW*PNGCVQ
Trigger: CTGAACACAGCCATTGGGCCACCACCTGATGGGCAG...AGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAAAAACTCTCCACGCCTaGACACGTCGCAGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKKTLHA*TRRSRG
Trigger: GCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTT...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTAAAACTCTCCACGCCTaGACACGTCGCAGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSKTLHA*TRRSRG
Trigger: GCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTT...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGAGGTTCGTGCCAATCTaGACAACAGGCGATAAGTTA +
Preference number: 2 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKRFVPI*TTGDKL
Trigger: TAACTTATCGCCTGTTGTCCAGATTGGCACGAACCT...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CAA 90 bp TGGAGTCTCACCTTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTaGGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTTGATTTGCAT +
Preference number: 2 (lower is better)
Translates to: WSLTFSCPSHASWSS*AKSAGRRSSRLDLH
Trigger: ATGCAAATCAAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAAGGTGAGACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR TCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACGAGACTCGGATACTaGACAGGAGAAACACAAAAC +
Preference number: 2 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLTRLGY*TGETQN
Trigger: GTTTTGTGTTTCTCCTGTTCAGTATCCGAGTCTCGT...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR TCA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAAATAGACAAGAGGACTaGGGTTGTCTGCACGATGCG +
Preference number: 2 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKNRQED*GCLHDA
Trigger: CGCATCGTGCAGACAACCTCAGTCCTCTTGTCTATT...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp ACCTGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCGCCATCCTGGTTACCTaGTTGTGCCAGACAGAACTT +
Preference number: 2 (lower is better)
Translates to: TCTHPAVLVHEQLSKPVSAILVT*LCQTEL
Trigger: AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGC...GCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCAAACCTGCACACACCCTaGTGTTTTAGTTCACGAGCA +
Preference number: 2 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEANLHTP*CFSSRA
Trigger: TGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGTT...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCATTCTTGTCCCAGTCATaGATCTTGGAGTTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEAFLSQS*ILEFLG
Trigger: GCCAAGGAACTCCAAGATGCATGACTGGGACAAGAA...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR GCA 90 bp ACACTAGAAGTGGCTTCACACTGTCTACAGTTTCCCTCGGGATGGACCCACAATGGAAGAAAAGGTTCGTaGCAATCTGGACAACAGGCG +
Preference number: 2 (lower is better)
Translates to: TLEVASHCLQFPSGWTHNGRKGS*QSGQQA
Trigger: CGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCC...ATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGTGAAGCCACTTCTAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR-3UTR CCA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTTCTGACCGACAGCTGTaGGCTCCAGATTGTACCGCA +
Preference number: 2 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSSDRQL*APDCTA
Trigger: TGCGGTACAATCTGGAGCCCACAGCTGTCGGTCAGA...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAATCTGACCGACAGCTGTaGGCTCCAGATTGTACCGCA +
Preference number: 2 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKSDRQL*APDCTA
Trigger: TGCGGTACAATCTGGAGCCCACAGCTGTCGGTCAGA...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCGTAGAGGAGGAACCTaGACACACCCTGCTGTTTTA +
Preference number: 2 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYRRGGT*THPAVL
Trigger: TAAAACAGCAGGGTGTGTGCAGGTTCCTCCTCTACG...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR TCA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAACGAGACTCGGATACTaGACAGGAGAAACACAAAAC +
Preference number: 2 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKTRLGY*TGETQN
Trigger: GTTTTGTGTTTCTCCTGTTCAGTATCCGAGTCTCGT...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR GCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCAAGGTTGTCTGCACGATaGGGGCTAACCTACGCAGCA +
Preference number: 2 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPRLSAR*GLTYAA
Trigger: TGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCT...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTTCAAAACCCACCTCGTaGATGTGGGAAGGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSSKPTS*MWEGPL
Trigger: AAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGA...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CAA 90 bp TTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTaGTGCCAGACAGAACTTACTGTCCCAGGTAAGCACCTAATTTTT +
Preference number: 2 (lower is better)
Translates to: FTSSYQSLLAILVTC*CQTELTVPGKHLIF
Trigger: AAAAATTAGGTGCTTACCTGGGACAGTAAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR CAA 90 bp AGAGAATTTGTCCAGCTCCAGAAAGAGGGGATGCAAAACAGGTCATaGTCACACTGCTGGGAAGACACTCAGTATTTGCTAGGATCACCA +
Preference number: 2 (lower is better)
Translates to: REFVQLQKEGMQNRS*SHCWEDTQYLLGSP
Trigger: TGGTGATCCTAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCCCTCTTTCTGGAGCTGGACAAATTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR GCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCTCTCTCCAAAAACAATaGTTCCCTCAAGGAATAAAG +
Preference number: 2 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTSLQKQ*FPQGIK
Trigger: CTTTATTCCTTGAGGGAAGCATTGTTTTTGGAGAGA...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTACTCCGTGCCGCCCGTaGGCCTTCTTCAAGTACTCC +
Preference number: 2 (lower is better)
Translates to: HLAKGSLSLRILSNVSRITPCRP*AFFKYS
Trigger: GGAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGT...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CAA 90 bp CAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTaGTCATTTTTCCAAAAGGACAAAGAGAAACCAAGTCACAGGCTC +
Preference number: 2 (lower is better)
Translates to: QVLRLTSEHKTGMQC*SFFQKDKEKPSHRL
Trigger: GAGCCTGTGACTTGGTTTCTCTTTGTCCTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR TCA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTACGAGACTCGGATACTaGACAGGAGAAACACAAAAC +
Preference number: 2 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSTRLGY*TGETQN
Trigger: GTTTTGTGTTTCTCCTGTTCAGTATCCGAGTCTCGT...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CCA 90 bp AAGACTCAGAAATTCATCCTCATAACTCCATTTCCCAGTAGAACACTCCACATTGCATCCTTGGCTGGATaGGCAAGCACACACCTCACA +
Preference number: 2 (lower is better)
Translates to: KTQKFILITPFPSRTLHIASLAG*ASTHLT
Trigger: TGTGAGGTGTGTGCTTGCCCATCCAGCCAAGGATGC...AATGTGGAGTGTTCTACTGGGAAATGGAGTTATGAGGATGAATTTCTGAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR CCA 90 bp ATCCTCATAACTCCATTTCCCAGTAGAACACTCCACATTACGAAAACTTCAAGTTTCCGTGAGCAAGACTaGCATCCTTGGCTGGATGGG +
Preference number: 2 (lower is better)
Translates to: ILITPFPSRTLHITKTSSFREQD*HPWLDG
Trigger: CCCATCCAGCCAAGGATGCCAGTCTTGCTCACGGAA...ACTTGAAGTTTTCGTAATGTGGAGTGTTCTACTGGGAAATGGAGTTATGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR TCA 90 bp GGGATGCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCTAGGAGATTTGCATAATTaGCCTATTTGGCTTTCTGCA +
Preference number: 2 (lower is better)
Translates to: GMQNRSLSHCWEDTQYLLGDLHN*PIWLSA
Trigger: TGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCC...TAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR GCA 90 bp ATCCTCATAACTCCATTTCCCAGTAGAACACTCCACATTACGAAAACTTCAAGTAACCTGCACACACCCTaGTGTTTTAGTTCACGAGCA +
Preference number: 2 (lower is better)
Translates to: ILITPFPSRTLHITKTSSNLHTP*CFSSRA
Trigger: TGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGTT...ACTTGAAGTTTTCGTAATGTGGAGTGTTCTACTGGGAAATGGAGTTATGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR GCA 90 bp CAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATGGCACCAGGATTCTTGTCCCAGTCATaGATCTTGGAGTTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: QNTHETHSIVKKFNMAPGFLSQS*ILEFLG
Trigger: GCCAAGGAACTCCAAGATGCATGACTGGGACAAGAA...TCCTGGTGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR CCA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGACCCAGTCATGCATCTTaGAGTTCCTTGGCTAAGTCT +
Preference number: 2 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRPSHAS*SSLAKS
Trigger: AGACTTAGCCAAGGAACTCCAAGATGCATGACTGGG...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR TCA 90 bp ATCCTCATAACTCCATTTCCCAGTAGAACACTCCACATTACGAAAACTTCAAGTGAGAAGCAGCAGGCTTaGTTTGCATCAATAAAAGCA +
Preference number: 2 (lower is better)
Translates to: ILITPFPSRTLHITKTSSEKQQA*FASIKA
Trigger: TGCTTTTATTGATGCAAATCAAGCCTGCTGCTTCTC...ACTTGAAGTTTTCGTAATGTGGAGTGTTCTACTGGGAAATGGAGTTATGAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR TCA 90 bp ATCCTCATAACTCCATTTCCCAGTAGAACACTCCACATTACGAAAACTTCAAGTAGAACCACAGTGAGCTaGTGGATATTTTACAGGAAA +
Preference number: 2 (lower is better)
Translates to: ILITPFPSRTLHITKTSSRTTVS*WIFYRK
Trigger: TTTCCTGTAAAATATCCATCAGCTCACTGTGGTTCT...ACTTGAAGTTTTCGTAATGTGGAGTGTTCTACTGGGAAATGGAGTTATGAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR TCA 90 bp CCATCGTCAAGAAATTTAATATGGCACCAGGAGATTTGCATAATTGACCTATTTGAGAAGCAGCAGGCTTaGTTTGCATCAATAAAAGCA +
Preference number: 2 (lower is better)
Translates to: PSSRNLIWHQEICIIDLFEKQQA*FASIKA
Trigger: TGCTTTTATTGATGCAAATCAAGCCTGCTGCTTCTC...AAATAGGTCAATTATGCAAATCTCCTGGTGCCATATTAAATTTCTTGACGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
3UTR GCA 72 bp CACTCAGGAAGGGCGGCAGCAAGGAGACCCTCGAGCTaGTGTCGGGCCCCGCACCCGAGGCTGGCCAGGGGG +
Preference number: 3 (lower is better)
Translates to: HSGRAAARRPSS*CRAPHPRLARG
Trigger: CCCCCTGGCCAGCCTCGGGTGCGGGGCCCGACAGCAGCTCGAGGGTCTCCTTGCTGCCGCCCTTCCTGAGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR CCA 72 bp GACCCTCGAGCTGCTGTCGGGCCCCGCACCCGAGGCTaGCCAGGGGGTCCAGGGAGAGGAAAGCCTCCTGTC +
Preference number: 3 (lower is better)
Translates to: DPRAAVGPRTRG*PGGPGRGKPPV
Trigger: GACAGGAGGCTTTCCTCTCCCTGGACCCCCTGGCCAGCCTCGGGTGCGGGGCCCGACAGCAGCTCGAGGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR CCA 72 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTaGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: SGRNSAVCLRVL*SQLAAPATEAQ
Trigger: CTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 72 bp TTGGCTGGATGGGCAAGCACACACCTCACAGGCAGCTaGGCCTCTCGACTTGGGGTGCGGAGGGGGAACGTG +
Preference number: 3 (lower is better)
Translates to: LAGWASTHLTGS*ASRLGVRRGNV
Trigger: CACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCCAGCTGCCTGTGAGGTGTGTGCTTGCCCATCCAGCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR TCA 72 bp ATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTaGGGGTGCTGTGGTCACAGCTCGCGGCCCCGGCCA +
Preference number: 3 (lower is better)
Translates to: IFRTVAGTAPYA*GCCGHSSRPRP
Trigger: TGGCCGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 72 bp CCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTaGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGG +
Preference number: 3 (lower is better)
Translates to: PGFSTVPPLPIR*WPNGCVQSRLG
Trigger: CCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CAA 90 bp GGATGGGCAAGCACACACCTCACAGGCAGCTGGGCCTCTCGACTTGGGGTGCGGAGGGTCTTGTTGGGGTaGAGGTCGGTGTCAGGGACT +
Preference number: 3 (lower is better)
Translates to: GWASTHLTGSWASRLGVRRVLLG*RSVSGT
Trigger: AGTCCCTGACACCGACCTCAACCCCAACAAGACCCT...CCGCACCCCAAGTCGAGAGGCCCAGCTGCCTGTGAGGTGTGTGCTTGCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR CAA 90 bp GCCCACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGAGGGTCTTGTTGGGGTaGAGGTCGGTGTCAGGGACT +
Preference number: 3 (lower is better)
Translates to: AHLGSRLLHCPASAHQVVRVLLG*RSVSGT
Trigger: AGTCCCTGACACCGACCTCAACCCCAACAAGACCCT...CACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CAA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGAGTGGCAGCAGGGTCTaGTTGGGGTTGAGGTCGGTG +
Preference number: 3 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRSGSRV*LGLRSV
Trigger: CACCGACCTCAACCCCAACAAGACCCTGCTGCCACT...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR GCA 72 bp TCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATaGTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCG +
Preference number: 3 (lower is better)
Translates to: SHLQDSGRNSAV*LRVLWSQLAAP
Trigger: CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR GCA 72 bp TCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCTaGATCATCCGGTCGTGCTCCCCAGCCACAGCCCTC +
Preference number: 3 (lower is better)
Translates to: SLLQLSHAFLQL*IIRSCSPATAL
Trigger: GAGGGCTGTGGCTGGGGAGCACGACCGGATGATGCAGAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR GCA 72 bp GAAGAGGTAGAAGTTCCCCAGGGCGTGCACGTGCTGTaGCTGGTCACTCAGGAAGGGCGGCAGCAAGGAGAC +
Preference number: 3 (lower is better)
Translates to: EEVEVPQGVHVL*LVTQEGRQQGD
Trigger: GTCTCCTTGCTGCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGGGAACTTCTACCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR CCA 72 bp GTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTaGGGGACCAGGCCTTCTCCGGGGGTGGCTGTGGTC +
Preference number: 3 (lower is better)
Translates to: VQSRLGQDSSQL*GTRPSPGVAVV
Trigger: GACCACAGCCACCCCCGGAGAAGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
3UTR CCA 72 bp GGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTaGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAA +
Preference number: 3 (lower is better)
Translates to: GFSTVPPLPIRW*PNGCVQSRLGQ
Trigger: TTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR CCA 72 bp TGGGCCTCTCGACTTGGGGTGCGGAGGGGGAACGTGTaGAGACAACCAGGGTGTCTCCAGCATCTTCAGGAC +
Preference number: 3 (lower is better)
Translates to: WASRLGVRRGNV*RQPGCLQHLQD
Trigger: GTCCTGAAGATGCTGGAGACACCCTGGTTGTCTCCACACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR CAA 90 bp CTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGAGGGTCTTGTTGGGGTaGAGGTCGGTGTCAGGGACT +
Preference number: 3 (lower is better)
Translates to: LHCPASAHQVVAQWLCSERVLLG*RSVSGT
Trigger: AGTCCCTGACACCGACCTCAACCCCAACAAGACCCT...CTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CAA 90 bp CCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCAGTGGCAGCAGGGTCTaGTTGGGGTTGAGGTCGGTG +
Preference number: 3 (lower is better)
Translates to: PGGYRVSLLQLSHAFLQLSGSRV*LGLRSV
Trigger: CACCGACCTCAACCCCAACAAGACCCTGCTGCCACT...GAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR-3UTR CAA 90 bp GGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCGCCATGCTAACCCTGTaGGCTATTAGGGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: GSAFRACCLTVEEEPAHTAMLTL*AIRGWG
Trigger: CCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGC...GGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR CAA 90 bp GGGCCTCTCGACTTGGGGTGCGGAGGGGGAACGTGTGGAGACAACCAGGGTGTCCCAGAGGGGTGCGGCTaGACTTTTAACAGAGGCTTT +
Preference number: 3 (lower is better)
Translates to: GPLDLGCGGGTCGDNQGVPEGCG*TFNRGF
Trigger: AAAGCCTCTGTTAAAAGTCAAGCCGCACCCCTCTGG...GACACCCTGGTTGTCTCCACACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR GCA 72 bp CCACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTaGCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGA +
Preference number: 3 (lower is better)
Translates to: PLGFQASPLSRL*PSGGGPMAVFR
Trigger: TCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR GCA 72 bp CACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTaGCTGACCGTAGAGGAGGAACCTGCACACACCCTG +
Preference number: 3 (lower is better)
Translates to: HWDGVGSAFRAC*LTVEEEPAHTL
Trigger: CAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR CCA 72 bp CAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTaGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCC +
Preference number: 3 (lower is better)
Translates to: QVVAQWLCSEQA*ARQFTVVGDQA
Trigger: GGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
3UTR-3UTR CAA 90 bp GCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCAGTGGCAGCAGGGTCTaGTTGGGGTTGAGGTCGGTG +
Preference number: 3 (lower is better)
Translates to: AVFRAGLGKTVHSCGGPGSGSRV*LGLRSV
Trigger: CACCGACCTCAACCCCAACAAGACCCTGCTGCCACT...GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
3UTR-3UTR CAA 90 bp CGGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCAGTGGCAGCAGGGTCTaGTTGGGGTTGAGGTCGGTG +
Preference number: 3 (lower is better)
Translates to: RCQGLLPGGYRVSLLQLSSGSRV*LGLRSV
Trigger: CACCGACCTCAACCCCAACAAGACCCTGCTGCCACT...GGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR-3UTR CAA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGACAAGAGGACTGAGGTaGTCTGCACGATGCGGGCTA +
Preference number: 3 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLATRGLR*SARCGL
Trigger: TAGCCCGCATCGTGCAGACAACCTCAGTCCTCTTGT...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CAA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCACAAGAGGACTGAGGTaGTCTGCACGATGCGGGCTA +
Preference number: 3 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARTRGLR*SARCGL
Trigger: TAGCCCGCATCGTGCAGACAACCTCAGTCCTCTTGT...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CAA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGGGCTACAGGGTGTCCTaGCTACAGCTTTCCCACGCC +
Preference number: 3 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRGYRVS*LQLSHA
Trigger: GGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCC...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR CCA 72 bp TGTGATGGTTCCGTGAGCAAGACTGGCATCCTTGGCTaGATGGGCAAGCACACACCTCACAGGCAGCTGGGC +
Preference number: 3 (lower is better)
Translates to: CDGSVSKTGILG*MGKHTPHRQLG
Trigger: GCCCAGCTGCCTGTGAGGTGTGTGCTTGCCCATCCAGCCAAGGATGCCAGTCTTGCTCACGGAACCATCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR CCA 72 bp ATTGTACCGCACTCCCATCTCAGCTCTGGGCCAGCCTaGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTG +
Preference number: 3 (lower is better)
Translates to: IVPHSHLSSGPA*LHSAHPGYLPL
Trigger: CAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAGAGCTGAGATGGGAGTGCGGTACAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 72 bp TTGGGGTTGAGGTCGGTGTCAGGGACTCCTTCCTGGTaGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGC +
Preference number: 3 (lower is better)
Translates to: LGLRSVSGTPSW*LQGVLATAFPR
Trigger: GCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCGACCTCAACCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR-3UTR CAA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGAGGGTCTTGTTGGGGTaGAGGTCGGTGTCAGGGACT +
Preference number: 3 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGRVLLG*RSVSGT
Trigger: AGTCCCTGACACCGACCTCAACCCCAACAAGACCCT...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
3UTR-3UTR CAA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTAACTGGGATGCAATGCTaGTCATTTTTCCAAAAGGAC +
Preference number: 3 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVTGMQC*SFFQKD
Trigger: GTCCTTTTGGAAAAATGACAAGCATTGCATCCCAGT...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR TCA 72 bp TACAGTTTCCCTCGGGATGGACCCACAATGAAAGCGTaGAACGGCTCAACCCGAGGGACGCAGCCAGGACAG +
Preference number: 3 (lower is better)
Translates to: YSFPRDGPTMKA*NGSTRGTQPGQ
Trigger: CTGTCCTGGCTGCGTCCCTCGGGTTGAGCCGTTTCACGCTTTCATTGTGGGTCCATCCCGAGGGAAACTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR GCA 72 bp CCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTaGTCAAAACCCACCTCGTGGATGTGGGAAGGTCCT +
Preference number: 3 (lower is better)
Translates to: PGSTQLIQATFP*SKPTSWMWEGP
Trigger: AGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 72 bp GATACTGAACAGGAGAAACACAAAACTCTCCACGCCTaGACACGTCGCAGCCGAGGCACCAGCGGGGATGCA +
Preference number: 3 (lower is better)
Translates to: DTEQEKHKTLHA*TRRSRGTSGDA
Trigger: TGCATCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTCAGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CAA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACGTGTTCAGAGCAGGCTaGGGCAAGACAGTTCACAGT +
Preference number: 3 (lower is better)
Translates to: RISLQSLLPDRRGGTCTHVFRAG*GKTVHS
Trigger: ACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACAC...GTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR TCA 72 bp CCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCCGACTaGCTTCGGAACACAAGACTGGGATGCAATGCTTGT +
Preference number: 3 (lower is better)
Translates to: PCRPWAFFKYSD*LRNTRLGCNAC
Trigger: ACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCCCACGGGCGGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR TCA 72 bp ACACTGTCTACAGTTTCCCTCGGGATGGACCCACAATaGAAGCGTGAAACGGCTCAACCCGAGGGACGCAGC +
Preference number: 3 (lower is better)
Translates to: TLSTVSLGMDPQ*KRETAQPEGRS
Trigger: GCTGCGTCCCTCGGGTTGAGCCGTTTCACGCTTTCATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR GCA 72 bp TTTAGTGGCTGCTACGGGGAGGGGAAGCTGAAGGGATaGTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTC +
Preference number: 3 (lower is better)
Translates to: FSGCYGEGKLKG*SSQPTEVQPPF
Trigger: GAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTCCCCTCCCCGTAGCAGCCACTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 72 bp TCCATCTGTCTCACAGGAGGTTCTGACCGACAGCTGTaGGCTCCAGATTGTACCGCACTCCCATCTCAGCTC +
Preference number: 3 (lower is better)
Translates to: SICLTGGSDRQL*APDCTALPSQL
Trigger: GAGCTGAGATGGGAGTGCGGTACAATCTGGAGCCCACAGCTGTCGGTCAGAACCTCCTGTGAGACAGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 72 bp TTGTTGGGGTTGAGGTCGGTGTCAGGGACTCCTTCCTaGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCA +
Preference number: 3 (lower is better)
Translates to: LLGLRSVSGTPS*WLQGVLATAFP
Trigger: TGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCGACCTCAACCCCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
3UTR-3UTR CAA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGCTGTGGGCTCCAGATaGTACCGCACTCCCATCTCA +
Preference number: 3 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLAVGSR*YRTPIS
Trigger: TGAGATGGGAGTGCGGTACAATCTGGAGCCCACAGC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CAA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGCAGTGGGTAAGCAATaGAAGCAAGAAGAGAAAGGA +
Preference number: 3 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARAVGKQ*KQEEKG
Trigger: TCCTTTCTCTTCTTGCTTCAATTGCTTACCCACTGC...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CAA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCAGTGGGTAAGCAATaGAAGCAAGAAGAGAAAGGA +
Preference number: 3 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAAVGKQ*KQEEKG
Trigger: TCCTTTCTCTTCTTGCTTCAATTGCTTACCCACTGC...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR GCA 72 bp CTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTaGACACACCCTGCTGTTTTAGTTCACGAGCAGCTA +
Preference number: 3 (lower is better)
Translates to: LQSLLPDRRGGT*THPAVLVHEQL
Trigger: TAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CAA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTACAAGAGGACTGAGGTaGTCTGCACGATGCGGGCTA +
Preference number: 3 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLTRGLR*SARCGL
Trigger: TAGCCCGCATCGTGCAGACAACCTCAGTCCTCTTGT...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CAA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGACTGGGATGCAATGCTaGTCATTTTTCCAAAAGGAC +
Preference number: 3 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLATGMQC*SFFQKD
Trigger: GTCCTTTTGGAAAAATGACAAGCATTGCATCCCAGT...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 72 bp GAAGTGGCTTCACACTGTCTACAGTTTCCCTCGGGATaGACCCACAATGAAAGCGTGAAACGGCTCAACCCG +
Preference number: 3 (lower is better)
Translates to: EVASHCLQFPSG*THNESVKRLNP
Trigger: CGGGTTGAGCCGTTTCACGCTTTCATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGTGAAGCCACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR-3UTR CAA 90 bp CTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTACAGTGGCAGCAGGGTCTaGTTGGGGTTGAGGTCGGTG +
Preference number: 3 (lower is better)
Translates to: LSKPVSHPGYLLVPDRTYSGSRV*LGLRSV
Trigger: CACCGACCTCAACCCCAACAAGACCCTGCTGCCACT...GTAAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR GCA 72 bp ACCCAAGAGAAAATAGACAAGAGGACTGAGGTTGTCTaGACGATGCGGGCTAACCTACGCAGCACTGCACGA +
Preference number: 3 (lower is better)
Translates to: TQEKIDKRTEVV*TMRANLRSTAR
Trigger: TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTTGTCTATTTTCTCTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 72 bp CCTTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTTaGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: PFLVPVMHLGVP*LSLQGGEAAGL
Trigger: CAAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR CCA 72 bp TTGAAATCGTACCACCCATTCACATCTTCAGGACAGTaGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTG +
Preference number: 3 (lower is better)
Translates to: LKSYHPFTSSGQ*QEQRRMLEGAV
Trigger: CACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGATTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CAA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTAGGGTCTTGTTGGGGTaGAGGTCGGTGTCAGGGACT +
Preference number: 3 (lower is better)
Translates to: SYQSLLAILVTCLCQTELRVLLG*RSVSGT
Trigger: AGTCCCTGACACCGACCTCAACCCCAACAAGACCCT...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CAA 90 bp CACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTGTGTTCAGAGCAGGCTaGGGCAAGACAGTTCACAGT +
Preference number: 3 (lower is better)
Translates to: HPAVLVHEQLSKPVSHPGVFRAG*GKTVHS
Trigger: ACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACAC...ACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CAA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTACTGGGATGCAATGCTaGTCATTTTTCCAAAAGGAC +
Preference number: 3 (lower is better)
Translates to: QQRSSHLSPTTERAQELRTGMQC*SFFQKD
Trigger: GTCCTTTTGGAAAAATGACAAGCATTGCATCCCAGT...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR TCA 72 bp CTTTCTGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTaGGCATTGACGGGACAGAGGCATAAACTGCAGCGC +
Preference number: 3 (lower is better)
Translates to: LSASSLVSCCRS*ALTGQRHKLQR
Trigger: GCGCTGCAGTTTATGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR TCA 72 bp ACCAGGGTGTCTCCAGCATCTTCAGGACACCTGTTGTaGTGGATCCTGAAGGAATTAGCAGGCGATGTATGC +
Preference number: 3 (lower is better)
Translates to: TRVSPASSGHLL*WILKELAGDVC
Trigger: GCATACATCGCCTGCTAATTCCTTCAGGATCCATCACAACAGGTGTCCTGAAGATGCTGGAGACACCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR CAA 90 bp ACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGTGTTCAGAGCAGGCTaGGGCAAGACAGTTCACAGT +
Preference number: 3 (lower is better)
Translates to: THPAVLVHEQLSKPVSHPVFRAG*GKTVHS
Trigger: ACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACAC...AGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR TCA 72 bp AGGAAAACTTCAGGTTATGAGTATGTGATGGTTCCGTaGGCAAGACTGGCATCCTTGGCTGGATGGGCAAGC +
Preference number: 3 (lower is better)
Translates to: RKTSGYEYVMVP*ARLASLAGWAS
Trigger: GCTTGCCCATCCAGCCAAGGATGCCAGTCTTGCTCACGGAACCATCACATACTCATAACCTGAAGTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR GCA 72 bp AGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTaGTTGTGCCAGACAGAACTTACTGTCCCAGGTAAG +
Preference number: 3 (lower is better)
Translates to: SSYQSLLAILVT*LCQTELTVPGK
Trigger: CTTACCTGGGACAGTAAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
3UTR-3UTR CAA 90 bp ATATGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTGCCATGCTAACCCTGTaGGCTATTAGGGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: IWHQEICIIDLFGFLHQVAMLTL*AIRGWG
Trigger: CCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGC...AACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR CAA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGAAGTGGCAGCAGGGTCTaGTTGGGGTTGAGGTCGGTG +
Preference number: 3 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRSGSRV*LGLRSV
Trigger: CACCGACCTCAACCCCAACAAGACCCTGCTGCCACT...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR CAA 90 bp TGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTTGGGTGTTCAGAGCAGGCTaGGGCAAGACAGTTCACAGT +
Preference number: 3 (lower is better)
Translates to: WHQEICIIDLFGFLHQVWVFRAG*GKTVHS
Trigger: ACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACAC...CCAAACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
3UTR-3UTR CAA 90 bp AGAGGGGATGCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTCTTTCTGCATCAAGTTaGGTGTCCTGTTGCAGAAGC +
Preference number: 3 (lower is better)
Translates to: RGDAKQVIVTLLGRHSVFLSASS*VSCCRS
Trigger: GCTTCTGCAACAGGACACCAAACTTGATGCAGAAAG...AAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR TCA 72 bp AAGCCCATAGCATTTCACTCATCAGTTTGTAGTGGTTaGAGCCACACCCAAAGCAAGAACCACAGTGAGCTG +
Preference number: 3 (lower is better)
Translates to: KPIAFHSSVCSG*SHTQSKNHSEL
Trigger: CAGCTCACTGTGGTTCTTGCTTTGGGTGTGGCTTCAACCACTACAAACTGATGAGTGAAATGCTATGGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR GCA 72 bp CAGAAAGAGGGGATGCAAAACAGGTCATTGTCACACTaGTGGGAAGACACTCAGTATTTGCTAGGATCACCA +
Preference number: 3 (lower is better)
Translates to: QKEGMQNRSLSH*WEDTQYLLGSP
Trigger: TGGTGATCCTAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCCCTCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR CCA 72 bp AAAGAGGGGATGCAAAACAGGTCATTGTCACACTGCTaGGAAGACACTCAGTATTTGCTAGGATCACCAGAG +
Preference number: 3 (lower is better)
Translates to: KEGMQNRSLSHC*EDTQYLLGSPE
Trigger: CTCTGGTGATCCTAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR CAA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTACAAGAGGACTGAGGTaGTCTGCACGATGCGGGCTA +
Preference number: 3 (lower is better)
Translates to: HLAKGSLSLRILSNVSRITRGLR*SARCGL
Trigger: TAGCCCGCATCGTGCAGACAACCTCAGTCCTCTTGT...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR TCA 72 bp GGATATTTTACAGGAAAACTTCAGGTTATGAGTATGTaGTGGTTCCGTGAGCAAGACTGGCATCCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: GYFTGKLQVMSM*WFREQDWHPWL
Trigger: CAGCCAAGGATGCCAGTCTTGCTCACGGAACCATCACATACTCATAACCTGAAGTTTTCCTGTAAAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR GCA 72 bp CTCCGACTGACTTCGGAACACAAGACTGGGATGCAATaGTTGTCATTTTTCCAAAAGGACAAAGAGAAACCA +
Preference number: 3 (lower is better)
Translates to: LRLTSEHKTGMQ*LSFFQKDKEKP
Trigger: TGGTTTCTCTTTGTCCTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 72 bp AGTCTCTTCCCGATGGGTATTTACAAAGCGGGGAGATaGAGTGTGAAATTAACCAGTGTTGAAATCGTACCA +
Preference number: 3 (lower is better)
Translates to: SLFPMGIYKAGR*SVKLTSVEIVP
Trigger: TGGTACGATTTCAACACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR TCA 72 bp ACAGACAAGAAGAGACGTGTGTGTAAGATTAAAGGCTaGGTAGCTTTAGGACAAGTTCACACACACAGTGAC +
Preference number: 3 (lower is better)
Translates to: TDKKRRVCKIKG*VALGQVHTHSD
Trigger: GTCACTGTGTGTGTGAACTTGTCCTAAAGCTACTCAGCCTTTAATCTTACACACACGTCTCTTCTTGTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR TCA 72 bp GTTGAAGCCACACCCAAAGCAAGAACCACAGTGAGCTaGTGGATATTTTACAGGAAAACTTCAGGTTATGAG +
Preference number: 3 (lower is better)
Translates to: VEATPKARTTVS*WIFYRKTSGYE
Trigger: CTCATAACCTGAAGTTTTCCTGTAAAATATCCATCAGCTCACTGTGGTTCTTGCTTTGGGTGTGGCTTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR-3UTR CAA 90 bp ATCCTCATAACTCCATTTCCCAGTAGAACACTCCACATTACGAAAACTTCAAGTAAGTTTGGTGTCCTGTaGCAGAAGCTGAGCATTGAC +
Preference number: 3 (lower is better)
Translates to: ILITPFPSRTLHITKTSSKFGVL*QKLSID
Trigger: GTCAATGCTCAGCTTCTGCAACAGGACACCAAACTT...ACTTGAAGTTTTCGTAATGTGGAGTGTTCTACTGGGAAATGGAGTTATGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR GCA 72 bp CACAAATGTTTACACCAAAATGGTCAAATCCTATCATaGTGGAAGATAAGACTGTCCACACACGCGCACAAA +
Preference number: 3 (lower is better)
Translates to: HKCLHQNGQILS*WKIRLSTHAHK
Trigger: TTTGTGCGCGTGTGTGGACAGTCTTATCTTCCAGCATGATAGGATTTGACCATTTTGGTGTAAACATTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR-3UTR CAA 90 bp CCATCGTCAAGAAATTTAATATGGCACCAGGAGATTTGCATAATTGACCTATTTCTTTCTGCATCAAGTTaGGTGTCCTGTTGCAGAAGC +
Preference number: 3 (lower is better)
Translates to: PSSRNLIWHQEICIIDLFLSASS*VSCCRS
Trigger: GCTTCTGCAACAGGACACCAAACTTGATGCAGAAAG...AAATAGGTCAATTATGCAAATCTCCTGGTGCCATATTAAATTTCTTGACGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
3UTR CCA 72 bp AAATGTTTACACCAAAATGGTCAAATCCTATCATGCTaGAAGATAAGACTGTCCACACACGCGCACAAACAT +
Preference number: 3 (lower is better)
Translates to: KCLHQNGQILSC*KIRLSTHAHKH
Trigger: ATGTTTGTGCGCGTGTGTGGACAGTCTTATCTTCCAGCATGATAGGATTTGACCATTTTGGTGTAAACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CCA 72 bp CTCATGAGACTCATTCCATCGTCAAGAAATTTAATATaGCACCAGGAGATTTGCATAATTGACCTATTTGGC +
Preference number: 3 (lower is better)
Translates to: LMRLIPSSRNLI*HQEICIIDLFG
Trigger: GCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
3UTR GCA 72 bp CCATCGTCAAGAAATTTAATATGGCACCAGGAGATTTaGATAATTGACCTATTTGGCTTTCTGCATCAAGTT +
Preference number: 3 (lower is better)
Translates to: PSSRNLIWHQEI*IIDLFGFLHQV
Trigger: AACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATATTAAATTTCTTGACGATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
CDS-3UTR CCA 90 bp AGAAAAGAGCGAGCCCAGCTGTCCCGCCTGGGCCATGCAGGGGCGGGAGGCTGCCCACGCAGGTCGCTGTaGGCGGGCTCCAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: RKERAQLSRLGHAGAGGCPRRSL*AGSRRS
Trigger: ACTGCGCCTGGAGCCCGCCCACAGCGACCTGCGTGG...GCAGCCTCCCGCCCCTGCATGGCCCAGGCGGGACAGCTGGGCTCGCTCTTTTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp AGGGCGGCAGCAAGGAGACCCTCGAGCTGCTGTCGGGCCCCGCACCCGAGGCTGTGCTTGAGGGTGCTGTaGTCACAGCTCGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: RAAARRPSSCCRAPHPRLCLRVL*SQLAAP
Trigger: CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCA...CAGCCTCGGGTGCGGGGCCCGACAGCAGCTCGAGGGTCTCCTTGCTGCCGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp AGAAAAGAGCGAGCCCAGCTGTCCCGCCTGGGCCATGCAGGGGCGGGAGGCTGCCGCAGGATGTGCCGGTaGGCGCAGGCTTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RKERAQLSRLGHAGAGGCRRMCR*AQAWEE
Trigger: TTCCTCCCAAGCCTGCGCCCACCGGCACATCCTGCG...GCAGCCTCCCGCCCCTGCATGGCCCAGGCGGGACAGCTGGGCTCGCTCTTTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR TCA 90 bp AGGGCGGCAGCAAGGAGACCCTCGAGCTGCTGTCGGGCCCCGCACCCGAGGCTGGTCTCCTCGATGATGTaGACAGCGTGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RAAARRPSSCCRAPHPRLVSSMM*TACSRL
Trigger: CAGCCTCGAGCACGCTGTTCACATCATCGAGGAGAC...CAGCCTCGGGTGCGGGGCCCGACAGCAGCTCGAGGGTCTCCTTGCTGCCGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAGTCCCGCCTGGGCCATaGAGGGGCGGGAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGVPPGP*RGGRLH
Trigger: GTGCAGCCTCCCGCCCCTGCATGGCCCAGGCGGGAC...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCCCACGCAGGTCGCTGTaGGCGGGCTCCAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFPRRSL*AGSRRS
Trigger: ACTGCGCCTGGAGCCCGCCCACAGCGACCTGCGTGG...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAACCCCGCACCCGAGGCTaGCCAGGGGGTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGSRLLHCPASAHQVVAQPRTRG*PGGPGR
Trigger: TCTCCCTGGACCCCCTGGCCAGCCTCGGGTGCGGGG...TTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGCCCCGCACCCGAGGCTaGCCAGGGGGTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQPRTRG*PGGPGR
Trigger: TCTCCCTGGACCCCCTGGCCAGCCTCGGGTGCGGGG...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGACCCAGCTGTCCCGCCTaGGCCATGCAGGGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGPSCPA*AMQGRE
Trigger: CTCCCGCCCCTGCATGGCCCAGGCGGGACAGCTGGG...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR TCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTATCCCAGTTCTCCAGGTaGGGAGGGGTCGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVSQFSR*GGVALT
Trigger: GGTGAGAGCGACCCCTCCTCACCTGGAGAACTGGGA...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGAAAAGAGCGAGCCCAGCTGTCCCGCCTGGGCCATGCAGGGGCGGGAGGCTGCGCCGTCGGGGCTGTCTaGGCTTTTTCGGATCACGTC +
Preference number: 4 (lower is better)
Translates to: RKERAQLSRLGHAGAGGCAVGAV*AFSDHV
Trigger: GACGTGATCCGAAAAAGCCCAGACAGCCCCGACGGC...GCAGCCTCCCGCCCCTGCATGGCCCAGGCGGGACAGCTGGGCTCGCTCTTTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGGTCCTCAGGCCGCCCTaGTCCCCCTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPVLRPP*SPLHTL
Trigger: AAGAGTGTGCAAGGGGGACCAGGGCGGCCTGAGGAC...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCACCACGCAGGTCGCTGTaGGCGGGCTCCAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWAPRRSL*AGSRRS
Trigger: ACTGCGCCTGGAGCCCGCCCACAGCGACCTGCGTGG...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGCCACGCAGGTCGCTGTaGGCGGGCTCCAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAPRRSL*AGSRRS
Trigger: ACTGCGCCTGGAGCCCGCCCACAGCGACCTGCGTGG...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGATGGCCCCGGAGGAGGTaGCCTGCACGGCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGWPRRR*PARLGL
Trigger: CAACCCCAGCCGTGCAGGCCACCTCCTCCGGGGCCA...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGTGGCCCCGGAGGAGGTaGCCTGCACGGCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAWPRRR*PARLGL
Trigger: CAACCCCAGCCGTGCAGGCCACCTCCTCCGGGGCCA...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGAGAGGAAGAGGGACATaGGGAGGCGGTTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPRGRGT*GGGCRW
Trigger: CCAGCGACAACCGCCTCCTCATGTCCCTCTTCCTCT...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGGTGTGCTATTGCAGATaGGGCTCAGCGCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPVCYCR*GSAPQD
Trigger: GTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACAC...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTAAGGTGCACCTCTCTGTaGTCCCAGGTGATCCGGGGT +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVRCTSL*SQVIRG
Trigger: ACCCCGGATCACCTGGGAGCACAGAGAGGTGCACCT...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTACGCCCTGGTCCCCCTTaGACACTCTTGCTATCCGTG +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVRPGPP*TLLLSV
Trigger: CACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCG...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCAGGAGACCCTCGAGCTaGTGTCGGGCCCCGCACCCG +
Preference number: 4 (lower is better)
Translates to: GALCQGESLGRCRISLQSRRPSS*CRAPHP
Trigger: CGGGTGCGGGGCCCGACAGCAGCTCGAGGGTCTCCT...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCCCCAGGGCGTGCACGTaGTGTGCCTGGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFPRACT*CAWSLR
Trigger: CCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGG...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp CACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCCCAGGGCGTGCACGTaGTGTGCCTGGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: HLGSRLLHCPASAHQVVAPRACT*CAWSLR
Trigger: CCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGG...GGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCGGCTCAGGAACTCCGTaGCGCCCGTGGGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAGSGTP*RPWAFF
Trigger: GAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCC...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGGTCCCATCCAGGGCCTaGGTCCGGTCCACCACGATC +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLVPSRA*VRSTTI
Trigger: GATCGTGGTGGACCGGACCCAGGCCCTGGATGGGAC...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCAAGGCCAGCGGGGCCTaGACCACGCCCGAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFKASGA*TTPELE
Trigger: CTCTAACTCGGGCGTGGTCCAGGCCCCGCTGGCCTT...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GCCCACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGCTCCGGGGGTGGCTGTaGTCAGTGGCAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: AHLGSRLLHCPASAHQVVLRGWL*SVAAGS
Trigger: AGACCCTGCTGCCACTGACCACAGCCACCCCCGGAG...CACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGAAAACTCTCCACGCCTaGACACGTCGCAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPKTLHA*TRRSRG
Trigger: GCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTT...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGACTCCGTGCCGCCCGTaGGCCTTCTTCAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPTPCRP*AFFKYS
Trigger: GGAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGT...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAAGGACTGCCCTGGAGGTaGCTTCCCCATGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LGSRLLHCPASAHQVVAQGLPWR*LPHGQR
Trigger: CCGCTGGCCATGGGGAAGCCACCTCCAGGGCAGTCC...TTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR TCA 90 bp TGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATTCAGGCCCGGGGACCTaGGCACGAAGACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: WVPGFSTVPPLPIRWWPNSGPGT*ARRHPA
Trigger: TGCGGGATGTCTTCGTGCTCAGGTCCCCGGGCCTGA...ATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGCGTCCTGCAGCCAGCTaGGTGCATGGGCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQRPAAS*VHGPCH
Trigger: ATGGCAGGGCCCATGCACTCAGCTGGCTGCAGGACG...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCGGGCAGGTGTGCTATTaGAGATGCGGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFGQVCY*RCGSAP
Trigger: GGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCC...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGTAGTTGGCGGCCCGTaGCTCGCTGTCGATGCACGC +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAVVGGP*LAVDAR
Trigger: GCGTGCATCGACAGCGAGGCACGGGCCGCCAACTAC...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAGTAGTTGGCGGCCCGTaGCTCGCTGTCGATGCACGC +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWAVVGGP*LAVDAR
Trigger: GCGTGCATCGACAGCGAGGCACGGGCCGCCAACTAC...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCTCCTCGCAGGTGCCGTaGTTCCCACAGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAASSQVP*FPQKAS
Trigger: GCTGGCCTTCTGTGGGAAGCACGGCACCTGCGAGGA...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AGAAGTTCCCCAGGGCGTGCACGTGCTGTGCCTGGTCACTCAGGAAGGGCGGCATCCTCGCAGGTGCCGTaGTTCCCACAGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RSSPGRARAVPGHSGRAASSQVP*FPQKAS
Trigger: GCTGGCCTTCTGTGGGAAGCACGGCACCTGCGAGGA...TGCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGGGAACTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAAAGGAGACCCTCGAGCTaGTGTCGGGCCCCGCACCCG +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKRRPSS*CRAPHP
Trigger: CGGGTGCGGGGCCCGACAGCAGCTCGAGGGTCTCCT...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCCCAGGGCGTGCACGTaGTGTGCCTGGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRPRACT*CAWSLR
Trigger: CCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGG...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCTGCAGCCAGCTGAGTaGATGGGCCCTGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: LHCPASAHQVVAQWLCSELQPAE*MGPAIG
Trigger: CCCGATGGCAGGGCCCATGCACTCAGCTGGCTGCAG...CTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAACCACTGTCCCGCCTCTaGCCATCAGGTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGSRLLHCPASAHQVVAQPLSRL*PSGGGP
Trigger: TGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGG...TTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCGGGTGCTCCCCATTCTaGTGGGAGAAGCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFGCSPF*WEKLPG
Trigger: GCCAGGGAGCTTCTCCCAGCAGAATGGGGAGCACCC...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCAGGCACCAGCGGGGATaGACAGCCGGCCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARRHQRG*TAGLSL
Trigger: GAGACTGAGGCCGGCTGTGCATCCCCGCTGGTGCCT...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGGCTCAGGAACTCCGTaGCGCCCGTGGGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAGSGTP*RPWAFF
Trigger: GAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCC...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGGTGTTAGCAGAGTCTaGAGCGCGCGTCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAGVSRV*SARPAR
Trigger: GCGGGCAGGACGCGCGCTGCAGACTCTGCTAACACC...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422704.7
CDS-3UTR CCA 90 bp AGGGCGGCAGCAAGGAGACCCTCGAGCTGCTGTCGGGCCCCGCACCCGAGGCTGGTCCTCAGAGGACTGTaGGAAGAATTTCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RAAARRPSSCCRAPHPRLVLRGL*EEFREM
Trigger: CATCTCCCGAAATTCTTCCCACAGTCCTCTGAGGAC...CAGCCTCGGGTGCGGGGCCCGACAGCAGCTCGAGGGTCTCCTTGCTGCCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCGTCCTCAGGCCGCCCTaGTCCCCCTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFVLRPP*SPLHTL
Trigger: AAGAGTGTGCAAGGGGGACCAGGGCGGCCTGAGGAC...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAAAGGCCAGCGGGGCCTaGACCACGCCCGAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGKASGA*TTPELE
Trigger: CTCTAACTCGGGCGTGGTCCAGGCCCCGCTGGCCTT...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTGGGGCTCTCGGTCTaGTGCAGAGCCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRLGLSV*CRATQV
Trigger: GACCTGCGTGGCTCTGCACCAGACCGAGAGCCCCAG...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GGGCCTCTCGACTTGGGGTGCGGAGGGGGAACGTGTGGAGACAACCAGGGTGTCCCATCGGGCAGTGCATaGGTCTGCACAGGGACACAG +
Preference number: 4 (lower is better)
Translates to: GPLDLGCGGGTCGDNQGVPSGSA*VCTGTQ
Trigger: CTGTGTCCCTGTGCAGACCCATGCACTGCCCGATGG...GACACCCTGGTTGTCTCCACACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGAGCCAGCTGAGTGCATaGGCCCTGCCATCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLSQLSA*ALPSGS
Trigger: ACTGCCCGATGGCAGGGCCCATGCACTCAGCTGGCT...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGAAAAGAGCGAGCCCAGCTGTCCCGCCTGGGCCATGCAGGGGCGGGAGGCTGCGAACAACTGACAAGGTaGGGGCCACTACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RKERAQLSRLGHAGAGGCEQLTR*GPLRAL
Trigger: CAAAGCCCGTAGTGGCCCCCACCTTGTCAGTTGTTC...GCAGCCTCCCGCCCCTGCATGGCCCAGGCGGGACAGCTGGGCTCGCTCTTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTATTCTCCGAGTGGAGCTaGGGGACCGTGTTGATGACG +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVFSEWS*GTVLMT
Trigger: CGTCATCAACACGGTCCCCCAGCTCCACTCGGAGAA...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAGCCGGTGTCCAGGGCTaGCTTGGGGTGCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGAGVQG*LGVLPI
Trigger: AATGGGGAGCACCCCAAGCCAGCCCTGGACACCGGC...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACGGCCAGCGGGAGCCTTaGCCTTGGCCCGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RISLQSLLPDRRGGTCTHGQREP*PWPVLW
Trigger: CCACAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCC...GTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
3UTR CAA 72 bp CAAGCACACACCTCACAGGCAGCTGGGCCTCTCGACTaGGGGTGCGGAGGGGGAACGTGTGGAGACAACCAG +
Preference number: 4 (lower is better)
Translates to: QAHTSQAAGPLD*GCGGGTCGDNQ
Trigger: CTGGTTGTCTCCACACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCCAGCTGCCTGTGAGGTGTGTGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCACAGCCTGGAGCTCGTaGACAGCGCGGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARTAWSS*TARSLR
Trigger: TCTCAGGGACCGCGCTGTTCACGAGCTCCAGGCTGT...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCTCTGTGCTCCCAGGTaGTCCGGGGTATGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAALCAPR*SGVWVQ
Trigger: TTGCACCCATACCCCGGATCACCTGGGAGCACAGAG...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGACTCAGCGCTTTCCCTaGTGGCGTCCTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRTQRFP*WRPAAS
Trigger: GCTGGCTGCAGGACGCCATCAGGGAAAGCGCTGAGT...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTATGGGGACTTTGCTGGTaGTGGTGTCTTGCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVWGLCW*WCLARS
Trigger: AGACCGAGCAAGACACCATCACCAGCAAAGTCCCCA...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AGAAGTTCCCCAGGGCGTGCACGTGCTGTGCCTGGTCACTCAGGAAGGGCGGCAGTGGCCGGGCAGGTGTaGTATTGCAGATGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RSSPGRARAVPGHSGRAAVAGQV*YCRCGS
Trigger: TGAGCCGCATCTGCAATAGCACACCTGCCCGGCCAC...TGCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGGGAACTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCAGGTGCACCTCTCTGTaGTCCCAGGTGATCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFRCTSL*SQVIRG
Trigger: ACCCCGGATCACCTGGGAGCACAGAGAGGTGCACCT...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCGCCCTGGTCCCCCTTaGACACTCTTGCTATCCGTG +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAARPGPP*TLLLSV
Trigger: CACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCG...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGTCCACTGTGGTGCTCTaGATGTACTTCCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPSTVVL*MYFPWE
Trigger: CTCCCACGGGAAGTACATGCAGAGCACCACAGTGGA...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCGTAGTTGGCGGCCCGTaGCTCGCTGTCGATGCACGC +
Preference number: 4 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTVVGGP*LAVDAR
Trigger: GCGTGCATCGACAGCGAGGCACGGGCCGCCAACTAC...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCGTAGTTGGCGGCCCGTaGCTCGCTGTCGATGCACGC +
Preference number: 4 (lower is better)
Translates to: GALCQGESLGRCRISLQSVVGGP*LAVDAR
Trigger: GCGTGCATCGACAGCGAGGCACGGGCCGCCAACTAC...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCTCCTCGCAGGTGCCGTaGTTCCCACAGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARSSQVP*FPQKAS
Trigger: GCTGGCCTTCTGTGGGAAGCACGGCACCTGCGAGGA...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCGGGCTCTCGGTCTGGTaGAGAGCCACGCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: GSAFRACCLTVEEEPAHTGLSVW*RATQVA
Trigger: AGCGACCTGCGTGGCTCTGCACCAGACCGAGAGCCC...GGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCCTGCCATCGGGCAGTaGATGGGTCTGCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRPAIGQ*MGLHRD
Trigger: GTCCCTGTGCAGACCCATGCACTGCCCGATGGCAGG...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCCTGCCATCGGGCAGTaGATGGGTCTGCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: LHCPASAHQVVAQWLCSEPAIGQ*MGLHRD
Trigger: GTCCCTGTGCAGACCCATGCACTGCCCGATGGCAGG...CTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCTCCCTGATGGCGTCCTaGAGCCAGCTGAGTGCATGG +
Preference number: 4 (lower is better)
Translates to: HLGSRLLHCPASAHQVVASLMAS*SQLSAW
Trigger: CCATGCACTCAGCTGGCTGCAGGACGCCATCAGGGA...GGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGAGGTTGTCTGCACGATaGGGGCTAACCTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPRLSAR*GLTYAA
Trigger: TGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCT...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATTCAGTCCCTGGGACTaGCCTGGAGGTGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LGSRLLHCPASAHQVVAQFSPWD*PGGGFP
Trigger: GGGGAAGCCACCTCCAGGGCAGTCCCAGGGACTGAA...TTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR GCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGAGCCACGTGCAGGACTaGAGACGCTCAGGAGCCGAC +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLASHVQD*RRSGAD
Trigger: GTCGGCTCCTGAGCGTCTGCAGTCCTGCACGTGGCT...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCTGGTCACAGGCCGGCTaGAATGCGTTGGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAWSQAG*NALVPH
Trigger: GTGTGGGACCAACGCATTCCAGCCGGCCTGTGACCA...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGCGCACCCACTTGGTGTaGGACTGCTCCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLRTHLV*DCSTVV
Trigger: CACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCG...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTATATAGCGCACCCACTTaGTGTGGGACTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVYSAPT*CGTAPL
Trigger: CAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATA...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCACTCCAGGCCGCGGCTTaGGTACCGGGCCATTATAGC +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWALQAAA*VPGHYS
Trigger: GCTATAATGGCCCGGTACCCAAGCCGCGGCCTGGAG...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCAGGAGCTGGTGTAGTTaGCGGCCCGTGCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARRSWCS*RPVPRC
Trigger: ACAGCGAGGCACGGGCCGCCAACTACACCAGCTCCT...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGAGGAGCTGGTGTAGTTaGCGGCCCGTGCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQRSWCS*RPVPRC
Trigger: ACAGCGAGGCACGGGCCGCCAACTACACCAGCTCCT...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGACCACGCAGGTCGCTGTaGGCGGGCTCCAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGPRRSL*AGSRRS
Trigger: ACTGCGCCTGGAGCCCGCCCACAGCGACCTGCGTGG...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGCTGGGGCTCTCGGTCTaGTGCAGAGCCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKLGLSV*CRATQV
Trigger: GACCTGCGTGGCTCTGCACCAGACCGAGAGCCCCAG...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGTGCACGTGCTGTGCCTaGTCACTCAGGAAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLACTCCA*SLRKGG
Trigger: GCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCA...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp CAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCTCCGGGGGTGGCTGTaGTCAGTGGCAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QGESLGRCRISLQSLLPDLRGWL*SVAAGS
Trigger: AGACCCTGCTGCCACTGACCACAGCCACCCCCGGAG...GTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGGGCGGCAGCAAGGAGACCCTCGAGCTGCTGTCGGGCCCCGCACCCGAGGCTGGCCAGGTTGGATTTTTaGGAGCATTTCAGTTCCGCT +
Preference number: 4 (lower is better)
Translates to: RAAARRPSSCCRAPHPRLARLDF*EHFSSA
Trigger: AGCGGAACTGAAATGCTCCCAAAAATCCAACCTGGC...CAGCCTCGGGTGCGGGGCCCGACAGCAGCTCGAGGGTCTCCTTGCTGCCGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGTCCTCTGACAGGCACTaGTACACCCCACTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPSSDRH*YTPLSP
Trigger: AGGAGACAGTGGGGTGTACCAGTGCCTGTCAGAGGA...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTACAAAGGGCTTGTCCCTaGCAGAAAGGTCGTCGATCC +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVQRACP*QKGRRS
Trigger: GGATCGACGACCTTTCTGCCAGGGACAAGCCCTTTG...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCACAGCCTGGAGCTCGTaGACAGCGCGGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GSAFRACCLTVEEEPAHTTAWSS*TARSLR
Trigger: TCTCAGGGACCGCGCTGTTCACGAGCTCCAGGCTGT...GGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCACAGCCTGGAGCTCGTaGACAGCGCGGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PGGYRVSLLQLSHAFLQLTAWSS*TARSLR
Trigger: TCTCAGGGACCGCGCTGTTCACGAGCTCCAGGCTGT...GAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR TCA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGGCCGGGAGCAGATaGGTCGGGCTTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GALCQGESLGRCRISLQSLAGSR*VGLSGR
Trigger: CCTTCCTGAAAGCCCGACTCATCTGCTCCCGGCCAG...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCTCAGGCCCGGGGACCTaGGCACGAAGACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLSGPGT*ARRHPA
Trigger: TGCGGGATGTCTTCGTGCTCAGGTCCCCGGGCCTGA...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCTCAGGCCCGGGGACCTaGGCACGAAGACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTSGPGT*ARRHPA
Trigger: TGCGGGATGTCTTCGTGCTCAGGTCCCCGGGCCTGA...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCAGGCCCGGGGACCTaGGCACGAAGACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSSGPGT*ARRHPA
Trigger: TGCGGGATGTCTTCGTGCTCAGGTCCCCGGGCCTGA...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGGCTGGGTCTCCTCGATaGTGTGAACAGCGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLAGSPR*CEQRAR
Trigger: TCGAGCACGCTGTTCACATCATCGAGGAGACCCAGC...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGATCGCCGCTCATCTCCTaGATCAAACCCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGSPLIS*IKPLLG
Trigger: CCCCAGCAGGGGTTTGATTCAGGAGATGAGCGGCGA...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AGGGTCTTGTTGGGGTTGAGGTCGGTGTCAGGGACTCCTTCCTGGTGGCTACAGCGTCCTGCAGCCAGCTaGGTGCATGGGCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RVLLGLRSVSGTPSWWLQRPAAS*VHGPCH
Trigger: ATGGCAGGGCCCATGCACTCAGCTGGCTGCAGGACG...CTGTAGCCACCAGGAAGGAGTCCCTGACACCGACCTCAACCCCAACAAGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR TCA 90 bp GGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCACTCAGCGCTTTCCCTaGTGGCGTCCTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GSAFRACCLTVEEEPAHTTQRFP*WRPAAS
Trigger: GCTGGCTGCAGGACGCCATCAGGGAAAGCGCTGAGT...GGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CTCCAGGCAGAGAGCTCTCTGGTCCACCTCTCCTGGTGGGTCACTTCAGGTCTCACTCAGCGCTTTCCCTaGTGGCGTCCTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LQAESSLVHLSWWVTSGLTQRFP*WRPAAS
Trigger: GCTGGCTGCAGGACGCCATCAGGGAAAGCGCTGAGT...GAGACCTGAAGTGACCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR TCA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTGGGTCTTGTTGGGGTTaGGGTCGGTGTCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: GESLGRCRISLQSLLPDRGSCWG*GRCQGL
Trigger: GAGTCCCTGACACCGACCTCAACCCCAACAAGACCC...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCAGCTTGGGAGGAAGGGTaGTGGCCCCGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPAWEEG*WPRRRW
Trigger: CCACCTCCTCCGGGGCCATCACCCTTCCTCCCAAGC...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGGCTTGGGAGGAAGGGTaGTGGCCCCGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKAWEEG*WPRRRW
Trigger: CCACCTCCTCCGGGGCCATCACCCTTCCTCCCAAGC...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAAGAGGAAGAGGGACATaGGGAGGCGGTTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGRGRGT*GGGCRW
Trigger: CCAGCGACAACCGCCTCCTCATGTCCCTCTTCCTCT...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGTCGTCGATCCTCTGTaGGTCCTCCCTATCCGTGGG +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAVVDPL*VLPIRG
Trigger: CCCACGGATAGGGAGGACTCACAGAGGATCGACGAC...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGACAGCGCCGTATGCTTaGGGGTGCTGTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLATAPYA*GCCGHS
Trigger: GCTGTGACCACAGCACCCTCAAGCATACGGCGCTGT...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCGATCCGGGGTATGGGTaGAAATGCCATCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: HLGSRLLHCPASAHQVVADPGYG*KCHRCP
Trigger: GGGACAGCGATGGCATTTGCACCCATACCCCGGATC...GGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCGATCCGGGGTATGGGTaGAAATGCCATCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAADPGYG*KCHRCP
Trigger: GGGACAGCGATGGCATTTGCACCCATACCCCGGATC...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCGAGGTCCATTTCTTCTaGAAGGTCCTCAGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: HLGSRLLHCPASAHQVVAEVHFF*KVLRPP
Trigger: GGGCGGCCTGAGGACCTTGCAGAAGAAATGGACCTC...GGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCGTTGTAGGCGCACACTaGCGACAGCCCCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAVVGAH*RQPHVV
Trigger: AACAACGTGGGGCTGTCGGCAGTGTGCGCCTACAAC...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACTCCTCGCAGGTGCCGTaGTTCCCACAGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPIRWWPNGCVQSRLGQDSSQVP*FPQKAS
Trigger: GCTGGCCTTCTGTGGGAAGCACGGCACCTGCGAGGA...GTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCACACAGTCCTCGCAGGTaGCGTGCTTCCCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWAHSPRR*RASHRR
Trigger: CCTTCTGTGGGAAGCACGGCACCTGCGAGGACTGTG...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAACACAGTCCTCGCAGGTaGCGTGCTTCCCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGSRLLHCPASAHQVVAQHSPRR*RASHRR
Trigger: CCTTCTGTGGGAAGCACGGCACCTGCGAGGACTGTG...TTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTGGGCTCTCGGTCTGGTaGAGAGCCACGCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSGLSVW*RATQVA
Trigger: AGCGACCTGCGTGGCTCTGCACCAGACCGAGAGCCC...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCGGGCTCTCGGTCTGGTaGAGAGCCACGCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLGLSVW*RATQVA
Trigger: AGCGACCTGCGTGGCTCTGCACCAGACCGAGAGCCC...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTATGCATCATCCGGTCGTaGTCCCCAGCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GSHWDGVGSAFRACCLTVCIIRS*SPATAL
Trigger: GAGGGCTGTGGCTGGGGAGCACGACCGGATGATGCA...TACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCACTGTCCCGCCTCTaGCCATCAGGTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRPLSRL*PSGGGP
Trigger: TGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGG...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCCTCTCGACTTGGGGTaGGGAGGGGGAACGTGTGGA +
Preference number: 4 (lower is better)
Translates to: GSAFRACCLTVEEEPAHTPLDLG*GGGTCG
Trigger: TCCACACGTTCCCCCTCCGCACCCCAAGTCGAGAGG...GGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTATTCACTTCCAGGACGTaGTTGGCGACCACTTGGAAG +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVFTSRT*LATTWK
Trigger: CTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGTGAA...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGGGGAAGCTGAAGGGATaGTCTTCTCAGCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPGKLKG*SSQPTE
Trigger: CTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTCCC...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCGGTGTTAGCAGAGTCTaGAGCGCGCGTCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LCSEQAWARQFTVVGDQAGVSRV*SARPAR
Trigger: GCGGGCAGGACGCGCGCTGCAGACTCTGCTAACACC...GGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455551.6
CDS-3UTR CCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAGGAAGTGGCGCTGAGTaGCTGCAGCACCCGGATGTA +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWAGSGAE*LQHPDV
Trigger: TACATCCGGGTGCTGCAGCCACTCAGCGCCACTTCC...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGTGGTCACAGGCCGGCTaGAATGCGTTGGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: LHCPASAHQVVAQWLCSEWSQAG*NALVPH
Trigger: GTGTGGGACCAACGCATTCCAGCCGGCCTGTGACCA...CTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCGACCAAGCCGCTGTCTaGCCGGGAGCAGATGAGTCG +
Preference number: 4 (lower is better)
Translates to: RCRISLQSLLPDRRGGTCDQAAV*PGADES
Trigger: CGACTCATCTGCTCCCGGCCAGACAGCGGCTTGGTC...GCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGTCCCATCCAGGGCCTaGGTCCGGTCCACCACGATC +
Preference number: 4 (lower is better)
Translates to: ESLGRCRISLQSLLPDRRVPSRA*VRSTTI
Trigger: GATCGTGGTGGACCGGACCCAGGCCCTGGATGGGAC...TCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTCCACGCAGGTCGCTGTaGGCGGGCTCCAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCPRRSL*AGSRRS
Trigger: ACTGCGCCTGGAGCCCGCCCACAGCGACCTGCGTGG...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACTGGGGCTCTCGGTCTaGTGCAGAGCCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPLGLSV*CRATQV
Trigger: GACCTGCGTGGCTCTGCACCAGACCGAGAGCCCCAG...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTTGCACGTGCTGTGCCTaGTCACTCAGGAAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPACTCCA*SLRKGG
Trigger: GCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCA...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTCCATCGGGCAGTGCATaGGTCTGCACAGGGACACAG +
Preference number: 4 (lower is better)
Translates to: GESLGRCRISLQSLLPDRPSGSA*VCTGTQ
Trigger: CTGTGTCCCTGTGCAGACCCATGCACTGCCCGATGG...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACAGCCAGCTGAGTGCATaGGCCCTGCCATCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: QGESLGRCRISLQSLLPDSQLSA*ALPSGS
Trigger: ACTGCCCGATGGCAGGGCCCATGCACTCAGCTGGCT...GTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTCCAGGCAGAGAGCTCTCTGGTCCACCTCTCCTGGTGGGTCACTTCAGGTCTCAGCCAGCTGAGTGCATaGGCCCTGCCATCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LQAESSLVHLSWWVTSGLSQLSA*ALPSGS
Trigger: ACTGCCCGATGGCAGGGCCCATGCACTCAGCTGGCT...GAGACCTGAAGTGACCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp GCCCACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGCTGGTCCACCTCTCCTaGTGGGTCACTTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: AHLGSRLLHCPASAHQVVLVHLS*WVTSGL
Trigger: GAGACCTGAAGTGACCCACCAGGAGAGGTGGACCAG...CACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCGGCCTTCTCCGGGGGTaGCTGTGGTCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: AVFRAGLGKTVHSCGGPGGLLRG*LWSVAA
Trigger: TGCTGCCACTGACCACAGCCACCCCCGGAGAAGGCC...GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACGGCCTTCTCCGGGGGTaGCTGTGGTCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RISLQSLLPDRRGGTCTHGLLRG*LWSVAA
Trigger: TGCTGCCACTGACCACAGCCACCCCCGGAGAAGGCC...GTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CGGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCGGCCTTCTCCGGGGGTaGCTGTGGTCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RCQGLLPGGYRVSLLQLSGLLRG*LWSVAA
Trigger: TGCTGCCACTGACCACAGCCACCCCCGGAGAAGGCC...GGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGCAGGTGGTGGCCCAATaGCTGTGTTCAGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLQVVAQ*LCSEQA
Trigger: AGCCTGCTCTGAACACAGCCATTGGGCCACCACCTG...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAGGTGGTGGCCCAATaGCTGTGTTCAGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: HLGSRLLHCPASAHQVVAQVVAQ*LCSEQA
Trigger: AGCCTGCTCTGAACACAGCCATTGGGCCACCACCTG...GGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGCCTCTGCCCATCAGGTaGTGGCCCAATGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLPLPIR*WPNGCV
Trigger: AACACAGCCATTGGGCCACCACCTGATGGGCAGAGG...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGCACCTCACAGGCAGCTaGGCCTCTCGACTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKHLTGS*ASRLGV
Trigger: CACCCCAAGTCGAGAGGCCCAGCTGCCTGTGAGGTG...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCAAAACTCTCCACGCCTaGACACGTCGCAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARKTLHA*TRRSRG
Trigger: GCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTT...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCTGCTTGAGGGTGCTGTaGTCACAGCTCGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTCLRVL*SQLAAP
Trigger: CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCA...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCATGCTTGAGGGTGCTGTaGTCACAGCTCGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPCLRVL*SQLAAP
Trigger: CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCA...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGGAGGTGGCTTCCCCATaGCCAGCGGGAGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQEVASP*PAGALA
Trigger: GGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTC...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp CGATCTGTGCTGGCCATGCTAACCCTGTTGGCTATTAGGGGGTGGGGGCACTCTTCCCTGGGACTGCCCTaGAGGTGGCTTCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: RSVLAMLTLLAIRGWGHSSLGLP*RWLPHG
Trigger: GCCATGGGGAAGCCACCTCCAGGGCAGTCCCAGGGA...AGAGTGCCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGCCAGCACAGATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGGAAACTGGGGCCTTTaGGGCAAATCTGGCCCACCG +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAGNWGL*GKSGPP
Trigger: CGGTGGGCCAGATTTGCCCCAAAGGCCCCAGTTTCC...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR TCA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCCCAGTTCTCCAGGTaGGGAGGGGTCGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSSQFSR*GGVALT
Trigger: GGTGAGAGCGACCCCTCCTCACCTGGAGAACTGGGA...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCGAACAGCGCGGTCCCTaGGAATCCACATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAEQRGP*ESTFPS
Trigger: ACTGGGAAATGTGGATTCTCAGGGACCGCGCTGTTC...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAAACAGCCTGGAGCTCGTaGACAGCGCGGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKTAWSS*TARSLR
Trigger: TCTCAGGGACCGCGCTGTTCACGAGCTCCAGGCTGT...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CGATCTGTGCTGGCCATGCTAACCCTGTTGGCTATTAGGGGGTGGGGGCACTCTACAGCCTGGAGCTCGTaGACAGCGCGGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: RSVLAMLTLLAIRGWGHSTAWSS*TARSLR
Trigger: TCTCAGGGACCGCGCTGTTCACGAGCTCCAGGCTGT...AGAGTGCCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGCCAGCACAGATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGACAGCCTGGAGCTCGTaGACAGCGCGGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: VRDSFLVATGCPCYSFPTTAWSS*TARSLR
Trigger: TCTCAGGGACCGCGCTGTTCACGAGCTCCAGGCTGT...CGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR TCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGCATCCCGCAGCACATTaGAGACCAAGCCGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAHPAAH*RPSRCL
Trigger: CAGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATG...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCCATCCCGCAGCACATTaGAGACCAAGCCGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARHPAAH*RPSRCL
Trigger: CAGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATG...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCACATCCCGCAGCACATTaGAGACCAAGCCGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWAHPAAH*RPSRCL
Trigger: CAGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATG...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGTCAGGCCCGGGGACCTaGGCACGAAGACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKSGPGT*ARRHPA
Trigger: TGCGGGATGTCTTCGTGCTCAGGTCCCCGGGCCTGA...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTCAGGCCCGGGGACCTaGGCACGAAGACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQSGPGT*ARRHPA
Trigger: TGCGGGATGTCTTCGTGCTCAGGTCCCCGGGCCTGA...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp GGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCAGCGTGCTCGAGGCTaGTGGCTTTGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: GSAFRACCLTVEEEPAHTQRARG*WLCAEL
Trigger: GAGCTCTGCACAAAGCCATCAGCCTCGAGCACGCTG...GGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCCAGCGTGCTCGAGGCTaGTGGCTTTGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: PGGYRVSLLQLSHAFLQLQRARG*WLCAEL
Trigger: GAGCTCTGCACAAAGCCATCAGCCTCGAGCACGCTG...GAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR TCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGTCTCCTCGATGATGTaGACAGCGTGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAVSSMM*TACSRL
Trigger: CAGCCTCGAGCACGCTGTTCACATCATCGAGGAGAC...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTCGTCCTGCAGCCAGCTaGGTGCATGGGCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPRPAAS*VHGPCH
Trigger: ATGGCAGGGCCCATGCACTCAGCTGGCTGCAGGACG...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCACTCAGCGCTTTCCCTaGTGGCGTCCTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCTQRFP*WRPAAS
Trigger: GCTGGCTGCAGGACGCCATCAGGGAAAGCGCTGAGT...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGCTACTACCTTCTGTCTaGACAACTGACAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPLLPSV*TTDKVG
Trigger: CCCCACCTTGTCAGTTGTTCAGACAGAAGGTAGTAG...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGACGGTCACAGAAATCTaGCTTGGGCTTCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPTVTEI*LGLLLP
Trigger: GGGAAGAAGAAGCCCAAGTCAGATTTCTGTGACCGT...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGAATAGACAAGAGGACTaGGGTTGTCTGCACGATGCG +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPNRQED*GCLHDA
Trigger: CGCATCGTGCAGACAACCTCAGTCCTCTTGTCTATT...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACGTGTGCTATTGCAGATaGGGCTCAGCGCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LPIRWWPNGCVQSRLGQDVCYCR*GSAPQD
Trigger: GTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACAC...GTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp TGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAAGGGCAGGTGTGCTATTaGAGATGCGGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: WDGVGSAFRACCLTVEEEGQVCY*RCGSAP
Trigger: GGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCC...TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACGTGGCCGGGCAGGTGTaGTATTGCAGATGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: QGESLGRCRISLQSLLPDVAGQV*YCRCGS
Trigger: TGAGCCGCATCTGCAATAGCACACCTGCCCGGCCAC...GTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAGATCCGGGGTATGGGTaGAAATGCCATCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWADPGYG*KCHRCP
Trigger: GGGACAGCGATGGCATTTGCACCCATACCCCGGATC...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAGATCCGGGGTATGGGTaGAAATGCCATCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGDPGYG*KCHRCP
Trigger: GGGACAGCGATGGCATTTGCACCCATACCCCGGATC...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCAGGTGCACCTCTCTGTaGTCCCAGGTGATCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PGGYRVSLLQLSHAFLQLRCTSL*SQVIRG
Trigger: ACCCCGGATCACCTGGGAGCACAGAGAGGTGCACCT...GAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTACAGGCCGGCTGGAATaGGTTGGTCCCACACACGTA +
Preference number: 4 (lower is better)
Translates to: GESLGRCRISLQSLLPDRTGRLE*VGPTHV
Trigger: TACGTGTGTGGGACCAACGCATTCCAGCCGGCCTGT...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTAGGATGTGTAGCTGTGTaGTGGGTCAAAGGGACATCT +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVGCVAV*WVKGTS
Trigger: AGATGTCCCTTTGACCCAGCACACAGCTACACATCC...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCCCTTGCACACTCTTaGTATCCGTGGGATCAGCAC +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAPLAHS*YPWDQH
Trigger: GTGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGG...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGCTGTGGGGTGAAGAGTaGATAGAACACAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPLWGEE*IEHRHL
Trigger: AAGGTGCCTGTGTTCTATGCACTCTTCACCCCACAG...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAGTTGTAGGCGCACACTaGCGACAGCCCCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWAVVGAH*RQPHVV
Trigger: AACAACGTGGGGCTGTCGGCAGTGTGCGCCTACAAC...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTCACTTGGTGTGGGACTaGTCCACTGTGGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GESLGRCRISLQSLLPDRHLVWD*STVVLC
Trigger: GCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTG...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGTAGTTGGCGGCCCGTaGCTCGCTGTCGATGCACGC +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRVVGGP*LAVDAR
Trigger: GCGTGCATCGACAGCGAGGCACGGGCCGCCAACTAC...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGGTAGTTGGCGGCCCGTaGCTCGCTGTCGATGCACGC +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKVVGGP*LAVDAR
Trigger: GCGTGCATCGACAGCGAGGCACGGGCCGCCAACTAC...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAAAGTTCCCCAGGGCGTaGACGTGCTGTGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GSHWDGVGSAFRACCLTVKFPRA*TCCAWS
Trigger: TGACCAGGCACAGCACGTGCACGCCCTGGGGAACTT...TACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CTCCAGGCAGAGAGCTCTCTGGTCCACCTCTCCTGGTGGGTCACTTCAGGTCTCGGCAGTGCATGGGTCTaGACAGGGACACAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LQAESSLVHLSWWVTSGLGSAWV*TGTQVS
Trigger: GGAGACCTGTGTCCCTGTGCAGACCCATGCACTGCC...GAGACCTGAAGTGACCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCCTGCCATCGGGCAGTaGATGGGTCTGCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCPAIGQ*MGLHRD
Trigger: GTCCCTGTGCAGACCCATGCACTGCCCGATGGCAGG...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GAGCAAGACTGGCATCCTTGGCTGGATGGGCAAGCACACACCTCACAGGCAGCTCCTGCCATCGGGCAGTaGATGGGTCTGCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: EQDWHPWLDGQAHTSQAAPAIGQ*MGLHRD
Trigger: GTCCCTGTGCAGACCCATGCACTGCCCGATGGCAGG...AGCTGCCTGTGAGGTGTGTGCTTGCCCATCCAGCCAAGGATGCCAGTCTTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp GGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTGCCATCGGGCAGTaGATGGGTCTGCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: GTPSWWLQGVLATAFPRLPAIGQ*MGLHRD
Trigger: GTCCCTGTGCAGACCCATGCACTGCCCGATGGCAGG...AAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp AGGGTCTTGTTGGGGTTGAGGTCGGTGTCAGGGACTCCTTCCTGGTGGCTACAGCCTGCCATCGGGCAGTaGATGGGTCTGCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: RVLLGLRSVSGTPSWWLQPAIGQ*MGLHRD
Trigger: GTCCCTGTGCAGACCCATGCACTGCCCGATGGCAGG...CTGTAGCCACCAGGAAGGAGTCCCTGACACCGACCTCAACCCCAACAAGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGCTGCAGCCAGCTGAGTaGATGGGCCCTGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQLQPAE*MGPAIG
Trigger: CCCGATGGCAGGGCCCATGCACTCAGCTGGCTGCAG...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGTCCCTGATGGCGTCCTaGAGCCAGCTGAGTGCATGG +
Preference number: 4 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKSLMAS*SQLSAW
Trigger: CCATGCACTCAGCTGGCTGCAGGACGCCATCAGGGA...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTGCATCATCCGGTCGTaGTCCCCAGCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSCIIRS*SPATAL
Trigger: GAGGGCTGTGGCTGGGGAGCACGACCGGATGATGCA...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGATGCATCATCCGGTCGTaGTCCCCAGCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARCIIRS*SPATAL
Trigger: GAGGGCTGTGGCTGGGGAGCACGACCGGATGATGCA...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGGCCTTCCTCCAGCTCTaGATCATCCGGTCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKAFLQL*IIRSCS
Trigger: GGAGCACGACCGGATGATGCAGAGCTGGAGGAAGGC...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCAGACCCTTGGGTGGATaGCACCAACACTTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAARPLGG*HQHFGG
Trigger: GCCACCAAAGTGTTGGTGGCATCCACCCAAGGGTCT...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTAGGCACCAGCGGGGATaGACAGCCGGCCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRRHQRG*TAGLSL
Trigger: GAGACTGAGGCCGGCTGTGCATCCCCGCTGGTGCCT...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAGCAGGGGCGGGAGGCTaGACAGCCTCCGCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGAGAGG*TASAKE
Trigger: TTCCTTAGCGGAGGCTGTGCAGCCTCCCGCCCCTGC...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp GGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCTGGTCACAGGCCGGCTaGAATGCGTTGGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: GSAFRACCLTVEEEPAHTWSQAG*NALVPH
Trigger: GTGTGGGACCAACGCATTCCAGCCGGCCTGTGACCA...GGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCGGGACTGCTCCACTGTaGTGCTCTGCATGTACTTCC +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFGTAPL*CSACTS
Trigger: GGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCC...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTATAGCGCACCCACTTaGTGTGGGACTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFYSAPT*CGTAPL
Trigger: CAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATA...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CGATCTGTGCTGGCCATGCTAACCCTGTTGGCTATTAGGGGGTGGGGGCACTCTCTCCAGGCCGCGGCTTaGGTACCGGGCCATTATAGC +
Preference number: 4 (lower is better)
Translates to: RSVLAMLTLLAIRGWGHSLQAAA*VPGHYS
Trigger: GCTATAATGGCCCGGTACCCAAGCCGCGGCCTGGAG...AGAGTGCCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGCCAGCACAGATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCCTCCAGGCCGCGGCTTaGGTACCGGGCCATTATAGC +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTLQAAA*VPGHYS
Trigger: GCTATAATGGCCCGGTACCCAAGCCGCGGCCTGGAG...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTCTCCAGGCCGCGGCTTaGGTACCGGGCCATTATAGC +
Preference number: 4 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSLQAAA*VPGHYS
Trigger: GCTATAATGGCCCGGTACCCAAGCCGCGGCCTGGAG...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCTCCAGGCCGCGGCTTaGGTACCGGGCCATTATAGC +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRLQAAA*VPGHYS
Trigger: GCTATAATGGCCCGGTACCCAAGCCGCGGCCTGGAG...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAAAGGAGCTGGTGTAGTTaGCGGCCCGTGCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKRSWCS*RPVPRC
Trigger: ACAGCGAGGCACGGGCCGCCAACTACACCAGCTCCT...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTAGGAGCTGGTGTAGTTaGCGGCCCGTGCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSRSWCS*RPVPRC
Trigger: ACAGCGAGGCACGGGCCGCCAACTACACCAGCTCCT...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTACTGCAGCGTCTTGTCTaGCAAATTCAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVLQRLV*QIQGAG
Trigger: ACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAG...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACAGTCCCATCCAGGGCCTaGGTCCGGTCCACCACGATC +
Preference number: 4 (lower is better)
Translates to: CRISLQSLLPDRRGGTCTVPSRA*VRSTTI
Trigger: GATCGTGGTGGACCGGACCCAGGCCCTGGATGGGAC...TGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGGTCCCATCCAGGGCCTaGGTCCGGTCCACCACGATC +
Preference number: 4 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQVPSRA*VRSTTI
Trigger: GATCGTGGTGGACCGGACCCAGGCCCTGGATGGGAC...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTGTCCCATCCAGGGCCTaGGTCCGGTCCACCACGATC +
Preference number: 4 (lower is better)
Translates to: PGYLPLLKTHLVDVGRSSVPSRA*VRSTTI
Trigger: GATCGTGGTGGACCGGACCCAGGCCCTGGATGGGAC...AGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCAAAGGCCAGCGGGGCCTaGACCACGCCCGAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPKASGA*TTPELE
Trigger: CTCTAACTCGGGCGTGGTCCAGGCCCCGCTGGCCTT...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGAAGGCCAGCGGGGCCTaGACCACGCCCGAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGKASGA*TTPELE
Trigger: CTCTAACTCGGGCGTGGTCCAGGCCCCGCTGGCCTT...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGACTGGGGCTCTCGGTCTaGTGCAGAGCCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGLGLSV*CRATQV
Trigger: GACCTGCGTGGCTCTGCACCAGACCGAGAGCCCCAG...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTCTGGGGCTCTCGGTCTaGTGCAGAGCCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRLGLSV*CRATQV
Trigger: GACCTGCGTGGCTCTGCACCAGACCGAGAGCCCCAG...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGGAATCAAACCCCTGCTaGGGCTCTCGGTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LHCPASAHQVVAQWLCSEESNPC*GSRSGA
Trigger: TGCACCAGACCGAGAGCCCCAGCAGGGGTTTGATTC...CTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGGTCCACCTCTCCTGGTaGGTCACTTCAGGTCTCATC +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLVHLSW*VTSGLI
Trigger: GATGAGACCTGAAGTGACCCACCAGGAGAGGTGGAC...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCTGGTCCACCTCTCCTaGTGGGTCACTTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LHCPASAHQVVAQWLCSELVHLS*WVTSGL
Trigger: GAGACCTGAAGTGACCCACCAGGAGAGGTGGACCAG...CTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACGGTGGCTGTGGTCAGTaGCAGCAGGGTCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: LPIRWWPNGCVQSRLGQDGGCGQ*QQGLVG
Trigger: CCCAACAAGACCCTGCTGCCACTGACCACAGCCACC...GTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGCTCCGGGGGTGGCTGTaGTCAGTGGCAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQLRGWL*SVAAGS
Trigger: AGACCCTGCTGCCACTGACCACAGCCACCCCCGGAG...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGGGCCTTCTCCGGGGGTaGCTGTGGTCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGGLLRG*LWSVAA
Trigger: TGCTGCCACTGACCACAGCCACCCCCGGAGAAGGCC...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAACCTCTGCCCATCAGGTaGTGGCCCAATGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LGSRLLHCPASAHQVVAQPLPIR*WPNGCV
Trigger: AACACAGCCATTGGGCCACCACCTGATGGGCAGAGG...TTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAGTCAAGGGGAGTCACTaGGACGGTGTAGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWAVKGSH*DGVGSA
Trigger: GGCTGATCCTACACCGTCCCAGTGACTCCCCTTGAC...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGTCAAGGGGAGTCACTaGGACGGTGTAGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: WVPGFSTVPPLPIRWWPNVKGSH*DGVGSA
Trigger: GGCTGATCCTACACCGTCCCAGTGACTCCCCTTGAC...ATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCATTGGCTATTAGGGGGTaGGGGCACTCTGTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWALAIRG*GHSVKG
Trigger: CCCCTTGACAGAGTGCCCCCACCCCCTAATAGCCAA...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGTTGGCTATTAGGGGGTaGGGGCACTCTGTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQLAIRG*GHSVKG
Trigger: CCCCTTGACAGAGTGCCCCCACCCCCTAATAGCCAA...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATTTGGCTATTAGGGGGTaGGGGCACTCTGTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: WVPGFSTVPPLPIRWWPNLAIRG*GHSVKG
Trigger: CCCCTTGACAGAGTGCCCCCACCCCCTAATAGCCAA...ATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCTGGGCCTCTCGACTTaGGGTGCGGAGGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVLGLST*GAEGER
Trigger: ACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCCAG...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp CGATCTGTGCTGGCCATGCTAACCCTGTTGGCTATTAGGGGGTGGGGGCACTCTCACCTCACAGGCAGCTaGGCCTCTCGACTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RSVLAMLTLLAIRGWGHSHLTGS*ASRLGV
Trigger: CACCCCAAGTCGAGAGGCCCAGCTGCCTGTGAGGTG...AGAGTGCCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGCCAGCACAGATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCGGCCACTACGGGCTTTaGAACCACCTTCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAGHYGL*NHLHFQ
Trigger: CTGGAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCC...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGTGGCCCCGGAGGAGGTaGCCTGCACGGCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLWPRRR*PARLGL
Trigger: CAACCCCAGCCGTGCAGGCCACCTCCTCCGGGGCCA...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGCGCAGGATGTGCCGGTaGGCGCAGGCTTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKRRMCR*AQAWEE
Trigger: TTCCTCCCAAGCCTGCGCCCACCGGCACATCCTGCG...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCCCCACCTCGTGGATGTaGGAAGGTCCTCTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFPTSWM*EGPLLR
Trigger: TCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGG...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGACCAGGGCCACAGCATaGAGAGGCCCAGAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQTRATA*RGPELG
Trigger: GCCGAGCTCTGGGCCTCTCCATGCTGTGGCCCTGGT...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGCCTTGGCCCGTCCTGTaGACTTCCTGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQPWPVL*TSCSLT
Trigger: GGTCAAAGAGCAGGAAGTCCACAGGACGGGCCAAGG...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTTTCCAATTCAGTCCCTaGGACTGCCCTGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GESLGRCRISLQSLLPDRFQFSP*DCPGGG
Trigger: GCCACCTCCAGGGCAGTCCCAGGGACTGAATTGGAA...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR TCA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGTCCCAGTTCTCCAGGTaGGGAGGGGTCGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQSQFSR*GGVALT
Trigger: GGTGAGAGCGACCCCTCCTCACCTGGAGAACTGGGA...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGTCCCAGTTCTCCAGGTaGGGAGGGGTCGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGSQFSR*GGVALT
Trigger: GGTGAGAGCGACCCCTCCTCACCTGGAGAACTGGGA...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTACAGCCTGGAGCTCGTaGACAGCGCGGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRTAWSS*TARSLR
Trigger: TCTCAGGGACCGCGCTGTTCACGAGCTCCAGGCTGT...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTCTGTGCTCCCAGGTaGTCCGGGGTATGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCLCAPR*SGVWVQ
Trigger: TTGCACCCATACCCCGGATCACCTGGGAGCACAGAG...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCTCTCTGTGCTCCCAGGTaGTCCGGGGTATGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LVATGCPCYSFPTPSSSSLCAPR*SGVWVQ
Trigger: TTGCACCCATACCCCGGATCACCTGGGAGCACAGAG...AGAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR TCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCGCTCAGCAGCAAGGCTaGGTAGTTGTAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFAQQQG*VVVDVW
Trigger: CCAGACATCTACAACTACTCAGCCTTGCTGCTGAGC...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCGCACCCGGATGTAGTTaGGGCACTCTGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAAPGCS*GTLSVL
Trigger: CAAAACAGACAGAGTGCCTCAACTACATCCGGGTGC...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCACAGACACCTCCGTaGAGAAGAAGTAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAPQTPP*RRSRPC
Trigger: ACAGGGTCTACTTCTTCTTCACGGAGGTGTCTGTGG...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCACTGGCCGGGAGCAGATaGGTCGGGCTTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPLAGSR*VGLSGR
Trigger: CCTTCCTGAAAGCCCGACTCATCTGCTCCCGGCCAG...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGCTGGCCGGGAGCAGATaGGTCGGGCTTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGLAGSR*VGLSGR
Trigger: CCTTCCTGAAAGCCCGACTCATCTGCTCCCGGCCAG...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACAGCGTGCTCGAGGCTaGTGGCTTTGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKQRARG*WLCAEL
Trigger: GAGCTCTGCACAAAGCCATCAGCCTCGAGCACGCTG...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACGTCTCCTCGATGATGTaGACAGCGTGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QGESLGRCRISLQSLLPDVSSMM*TACSRL
Trigger: CAGCCTCGAGCACGCTGTTCACATCATCGAGGAGAC...GTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACGTCCTGCAGCCAGCTaGGTGCATGGGCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSRPAAS*VHGPCH
Trigger: ATGGCAGGGCCCATGCACTCAGCTGGCTGCAGGACG...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTAGTCTTGTTCCCTGCTaGGGAGAGGACAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPASLVPC*GEDRAA
Trigger: CGCTGCTCTGTCCTCTCCTCAGCAGGGAACAAGACT...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCAGTCTTGTTCCCTGCTaGGGAGAGGACAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTSLVPC*GEDRAA
Trigger: CGCTGCTCTGTCCTCTCCTCAGCAGGGAACAAGACT...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCTGGGTCTTGTTGGGGTTaGGGTCGGTGTCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: LVATGCPCYSFPTPSSSSGSCWG*GRCQGL
Trigger: GAGTCCCTGACACCGACCTCAACCCCAACAAGACCC...AGAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR TCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGCAGAGGGGTGCGGCTTaGCTTTTAACAGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLQRGAA*LLTEAL
Trigger: CAAAGCCTCTGTTAAAAGTCAAGCCGCACCCCTCTG...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTACCCACTGTCTCCTTCTaGCAAGTTGAAGATGAGCAA +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVPTVSF*QVEDEQ
Trigger: TTGCTCATCTTCAACTTGTCAGAAGGAGACAGTGGG...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGGCTTGGGAGGAAGGGTaGTGGCCCCGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLAWEEG*WPRRRW
Trigger: CCACCTCCTCCGGGGCCATCACCCTTCCTCCCAAGC...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAAGTCGTCGATCCTCTGTaGGTCCTCCCTATCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKVVDPL*VLPIRG
Trigger: CCCACGGATAGGGAGGACTCACAGAGGATCGACGAC...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAGTCTCCATCTGCGTCTaGGTCAGCGAACTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGVSICV*VSELQL
Trigger: GAGCTGAAGTTCGCTGACTCAGACGCAGATGGAGAC...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCCCAAAGGCGCCCTTGTaGAGGTTCCATCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARPKAPL*RFHLSH
Trigger: GTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGG...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAACAGCGCCGTATGCTTaGGGGTGCTGTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPTAPYA*GCCGHS
Trigger: GCTGTGACCACAGCACCCTCAAGCATACGGCGCTGT...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGTTCAGAAATCTTTGCTaGAGCGCGCGTCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKFRNLC*SARPAR
Trigger: GCGGGCAGGACGCGCGCTGCAGCAAAGATTTCTGAA...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339861.8
CDS-3UTR GCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAGTGTGCTATTGCAGATaGGGCTCAGCGCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPVCYCR*GSAPQD
Trigger: GTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACAC...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCGTGTGCTATTGCAGATaGGGCTCAGCGCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTVCYCR*GSAPQD
Trigger: GTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACAC...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTGGGCAGGTGTGCTATTaGAGATGCGGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVGQVCY*RCGSAP
Trigger: GGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCC...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGGGCAGGTGTGCTATTaGAGATGCGGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRGQVCY*RCGSAP
Trigger: GGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCC...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGGGGCAGGTGTGCTATTaGAGATGCGGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGGQVCY*RCGSAP
Trigger: GGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCC...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGAGTGGCCGGGCAGGTGTaGTATTGCAGATGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARVAGQV*YCRCGS
Trigger: TGAGCCGCATCTGCAATAGCACACCTGCCCGGCCAC...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACGTGGCCGGGCAGGTGTaGTATTGCAGATGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RISLQSLLPDRRGGTCTHVAGQV*YCRCGS
Trigger: TGAGCCGCATCTGCAATAGCACACCTGCCCGGCCAC...GTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCAGGTGCACCTCTCTGTaGTCCCAGGTGATCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCRCTSL*SQVIRG
Trigger: ACCCCGGATCACCTGGGAGCACAGAGAGGTGCACCT...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCCTCGGAGATGTTGAGTaGGTTCACAGCGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARLGDVE*VHSEDR
Trigger: GCGGTCTTCGCTGTGAACGCACTCAACATCTCCGAG...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCACAGGCCGGCTGGAATaGGTTGGTCCCACACACGTA +
Preference number: 4 (lower is better)
Translates to: GALCQGESLGRCRISLQSTGRLE*VGPTHV
Trigger: TACGTGTGTGGGACCAACGCATTCCAGCCGGCCTGT...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACGAGGTCCATTTCTTCTaGAAGGTCCTCAGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: QGESLGRCRISLQSLLPDEVHFF*KVLRPP
Trigger: GGGCGGCCTGAGGACCTTGCAGAAGAAATGGACCTC...GTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCGTTGTAGGCGCACACTaGCGACAGCCCCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: GALCQGESLGRCRISLQSVVGAH*RQPHVV
Trigger: AACAACGTGGGGCTGTCGGCAGTGTGCGCCTACAAC...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGACTGCTCCACTGTGGTaGTCTGCATGTACTTCCCGT +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLTAPLW*SACTSR
Trigger: ACGGGAAGTACATGCAGAGCACCACAGTGGAGCAGT...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AGAAGTTCCCCAGGGCGTGCACGTGCTGTGCCTGGTCACTCAGGAAGGGCGGCAACTGCTCCACTGTGGTaGTCTGCATGTACTTCCCGT +
Preference number: 4 (lower is better)
Translates to: RSSPGRARAVPGHSGRAATAPLW*SACTSR
Trigger: ACGGGAAGTACATGCAGAGCACCACAGTGGAGCAGT...TGCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGGGAACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp CTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACCACTTGGTGTGGGACTaGTCCACTGTGGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LPIRWWPNGCVQSRLGQDHLVWD*STVVLC
Trigger: GCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTG...GTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCACAGTCCTCGCAGGTaGCGTGCTTCCCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RISLQSLLPDRRGGTCTHHSPRR*RASHRR
Trigger: CCTTCTGTGGGAAGCACGGCACCTGCGAGGACTGTG...GTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAAAGTTCCCCAGGGCGTaGACGTGCTGTGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ESLGRCRISLQSLLPDRRKFPRA*TCCAWS
Trigger: TGACCAGGCACAGCACGTGCACGCCCTGGGGAACTT...TCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCGGCAGTGCATGGGTCTaGACAGGGACACAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LCSEQAWARQFTVVGDQAGSAWV*TGTQVS
Trigger: GGAGACCTGTGTCCCTGTGCAGACCCATGCACTGCC...GGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGATCCCTGATGGCGTCCTaGAGCCAGCTGAGTGCATGG +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARSLMAS*SQLSAW
Trigger: CCATGCACTCAGCTGGCTGCAGGACGCCATCAGGGA...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTACAGGGTGTCCTTaGTACAGCTTTCCCACGCCT +
Preference number: 4 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQATGCP*YSFPTP
Trigger: AGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGC...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTCCACTGTCCCGCCTCTaGCCATCAGGTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCPLSRL*PSGGGP
Trigger: TGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGG...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCGCCTTCAGAGCCTGCTaGCTGACCGTAGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTAFRAC*LTVEEE
Trigger: TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGC...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTGCCTTCAGAGCCTGCTaGCTGACCGTAGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPAAFRAC*LTVEEE
Trigger: TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGC...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTCAGCCTTCAGAGCCTaGTGCCTGACCGTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTSAFRA*CLTVEE
Trigger: CTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGA...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACTCAGCCTTCAGAGCCTaGTGCCTGACCGTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LPIRWWPNGCVQSRLGQDSAFRA*CLTVEE
Trigger: CTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGA...GTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAAGACCCTTGGGTGGATaGCACCAACACTTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGRPLGG*HQHFGG
Trigger: GCCACCAAAGTGTTGGTGGCATCCACCCAAGGGTCT...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAAGGTTGTCTGCACGATaGGGGCTAACCTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGRLSAR*GLTYAA
Trigger: TGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCT...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAGGCTCAGGAACTCCGTaGCGCCCGTGGGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGGSGTP*RPWAFF
Trigger: GAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCC...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAAGGAAGTGGCGCTGAGTaGCTGCAGCACCCGGATGTA +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKGSGAE*LQHPDV
Trigger: TACATCCGGGTGCTGCAGCCACTCAGCGCCACTTCC...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCCCGGCTGGAATGCGTTaGTCCCACACACGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTPAGMR*SHTRKG
Trigger: CCCTTTACGTGTGTGGGACCAACGCATTCCAGCCGG...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCATGGTCACAGGCCGGCTaGAATGCGTTGGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPWSQAG*NALVPH
Trigger: GTGTGGGACCAACGCATTCCAGCCGGCCTGTGACCA...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGGGTCTTGTTGGGGTTGAGGTCGGTGTCAGGGACTCCTTCCTGGTGGCTACAGTGGTCACAGGCCGGCTaGAATGCGTTGGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: RVLLGLRSVSGTPSWWLQWSQAG*NALVPH
Trigger: GTGTGGGACCAACGCATTCCAGCCGGCCTGTGACCA...CTGTAGCCACCAGGAAGGAGTCCCTGACACCGACCTCAACCCCAACAAGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGAGCCGTCGGGGCTGTCTaGGCTTTTTCGGATCACGTC +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARAVGAV*AFSDHV
Trigger: GACGTGATCCGAAAAAGCCCAGACAGCCCCGACGGC...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGCCGTCGGGGCTGTCTaGGCTTTTTCGGATCACGTC +
Preference number: 4 (lower is better)
Translates to: ESLGRCRISLQSLLPDRRAVGAV*AFSDHV
Trigger: GACGTGATCCGAAAAAGCCCAGACAGCCCCGACGGC...TCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGGCCGTCGGGGCTGTCTaGGCTTTTTCGGATCACGTC +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRAVGAV*AFSDHV
Trigger: GACGTGATCCGAAAAAGCCCAGACAGCCCCGACGGC...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGTCCTCAGGCCGCCCTaGTCCCCCTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQVLRPP*SPLHTL
Trigger: AAGAGTGTGCAAGGGGGACCAGGGCGGCCTGAGGAC...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGGTCCTCAGGCCGCCCTaGTCCCCCTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQVLRPP*SPLHTL
Trigger: AAGAGTGTGCAAGGGGGACCAGGGCGGCCTGAGGAC...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTGTCCTCAGGCCGCCCTaGTCCCCCTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVVLRPP*SPLHTL
Trigger: AAGAGTGTGCAAGGGGGACCAGGGCGGCCTGAGGAC...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGACCAAGCCGCTGTCTaGCCGGGAGCAGATGAGTCG +
Preference number: 4 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQDQAAV*PGADES
Trigger: CGACTCATCTGCTCCCGGCCAGACAGCGGCTTGGTC...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp AAGAGGACTGAGGTTGTCTGCACGATGCGGGCTAACCTACGCAGCACTGCACGAGACCAAGCCGCTGTCTaGCCGGGAGCAGATGAGTCG +
Preference number: 4 (lower is better)
Translates to: KRTEVVCTMRANLRSTARDQAAV*PGADES
Trigger: CGACTCATCTGCTCCCGGCCAGACAGCGGCTTGGTC...TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGGACCAAGCCGCTGTCTaGCCGGGAGCAGATGAGTCG +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGDQAAV*PGADES
Trigger: CGACTCATCTGCTCCCGGCCAGACAGCGGCTTGGTC...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGTGCATGTACTTCCCGTaGGAGAAGACCTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LHCPASAHQVVAQWLCSECMYFP*EKTSSA
Trigger: AGCCGAGGAGGTCTTCTCCCACGGGAAGTACATGCA...CTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGGACTGCTCCACTGTaGTGCTCTGCATGTACTTCC +
Preference number: 4 (lower is better)
Translates to: WVPGFSTVPPLPIRWWPNGTAPL*CSACTS
Trigger: GGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCC...ATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAGGGACTGCTCCACTGTaGTGCTCTGCATGTACTTCC +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWAGTAPL*CSACTS
Trigger: GGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCC...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACGCACCCACTTGGTGTaGGACTGCTCCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPRTHLV*DCSTVV
Trigger: CACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCG...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCGCACCCACTTGGTGTaGGACTGCTCCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRRTHLV*DCSTVV
Trigger: CACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCG...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGACTCCAGGCCGCGGCTTaGGTACCGGGCCATTATAGC +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGLQAAA*VPGHYS
Trigger: GCTATAATGGCCCGGTACCCAAGCCGCGGCCTGGAG...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGGCAAATTCAAGGAGCTaGTGTAGTTGGCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRANSRS*CSWRPV
Trigger: CACGGGCCGCCAACTACACCAGCTCCTTGAATTTGC...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCAAATTCAAGGAGCTaGTGTAGTTGGCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAANSRS*CSWRPV
Trigger: CACGGGCCGCCAACTACACCAGCTCCTTGAATTTGC...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCAAATTCAAGGAGCTaGTGTAGTTGGCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQANSRS*CSWRPV
Trigger: CACGGGCCGCCAACTACACCAGCTCCTTGAATTTGC...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGCAAATTCAAGGAGCTaGTGTAGTTGGCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARANSRS*CSWRPV
Trigger: CACGGGCCGCCAACTACACCAGCTCCTTGAATTTGC...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGCAGCAGGGTCTGGACTaGCTCAAAGTCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAQQGLD*LKVLEE
Trigger: CTCTTCCAGGACTTTGAGCCAGTCCAGACCCTGCTG...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCACAGCAGGGTCTGGACTaGCTCAAAGTCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWAQQGLD*LKVLEE
Trigger: CTCTTCCAGGACTTTGAGCCAGTCCAGACCCTGCTG...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCGACAGCAGCAGGGTCTaGACTGGCTCAAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSAFRACCLTVEEEPAHTDSSRV*TGSKSW
Trigger: CCAGGACTTTGAGCCAGTCCAGACCCTGCTGCTGTC...GGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGAAGGCCAGCGGGGCCTaGACCACGCCCGAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVKASGA*TTPELE
Trigger: CTCTAACTCGGGCGTGGTCCAGGCCCCGCTGGCCTT...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTCCCCGCACCCGAGGCTaGCCAGGGGGTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: HPAVLVHEQLSKPVSHPGPRTRG*PGGPGR
Trigger: TCTCCCTGGACCCCCTGGCCAGCCTCGGGTGCGGGG...ACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTGCACGTGCTGTGCCTaGTCACTCAGGAAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQCTCCA*SLRKGG
Trigger: GCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCA...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACCTGGTCCACCTCTCCTaGTGGGTCACTTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LPIRWWPNGCVQSRLGQDLVHLS*WVTSGL
Trigger: GAGACCTGAAGTGACCCACCAGGAGAGGTGGACCAG...GTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAAGGCAGAGAGCTCTCTaGTCCACCTCTCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ESLGRCRISLQSLLPDRRRQRAL*STSPGG
Trigger: CCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCT...TCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCAGGCAGAGAGCTCTCTaGTCCACCTCTCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LCSEQAWARQFTVVGDQARQRAL*STSPGG
Trigger: CCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCT...GGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CGATCTGTGCTGGCCATGCTAACCCTGTTGGCTATTAGGGGGTGGGGGCACTCTAGGCAGAGAGCTCTCTaGTCCACCTCTCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RSVLAMLTLLAIRGWGHSRQRAL*STSPGG
Trigger: CCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCT...AGAGTGCCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGCCAGCACAGATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCTAGGCAGAGAGCTCTCTaGTCCACCTCTCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LVATGCPCYSFPTPSSSSRQRAL*STSPGG
Trigger: CCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCT...AGAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTGGGACTCCTTCCTGGTaGCTACAGGGTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPAGTPSW*LQGVLA
Trigger: AGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCC...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGTCAGGGACTCCTTCCTaGTGGCTACAGGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: LHCPASAHQVVAQWLCSESGTPS*WLQGVL
Trigger: AAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGA...CTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTGCTGGGAAGACACTCAGTATTTGCTAGGATCACCAGAGGGGTGCGGCTTGACCTGGGCCTCTCGACTTaGGGTGCGGAGGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: LLGRHSVFARITRGVRLDLGLST*GAEGER
Trigger: ACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCCAG...GTCAAGCCGCACCCCTCTGGTGATCCTAGCAAATACTGAGTGTCTTCCCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp TGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGCATCCTTGGCTGGATaGGCAAGCACACACCTCACA +
Preference number: 4 (lower is better)
Translates to: WVPGFSTVPPLPIRWWPNASLAG*ASTHLT
Trigger: TGTGAGGTGTGTGCTTGCCCATCCAGCCAAGGATGC...ATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTACCACCAACACTTTGGTaGCAATCCTACTACCTTCTG +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVPPTLW*QSYYLL
Trigger: CAGAAGGTAGTAGGATTGCCACCAAAGTGTTGGTGG...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCACTCCGTGCCGCCCGTaGGCCTTCTTCAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTTPCRP*AFFKYS
Trigger: GGAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGT...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACCAAAGCACACCTGTGTaGCCTGTGTCCCCTAGGACC +
Preference number: 4 (lower is better)
Translates to: LPIRWWPNGCVQSRLGQDQSTPV*PVSPRT
Trigger: GGTCCTAGGGGACACAGGCCACACAGGTGTGCTTTG...GTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGCACTCCTTTGCAGTGTaGGAGATCAGTCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPHSFAV*EISLKT
Trigger: TGTCTTGAGACTGATCTCCCACACTGCAAAGGAGTG...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR CAA 72 bp TCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTaGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: SGGGPMAVFRAG*GKTVHSCGGPG
Trigger: GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
3UTR CAA 72 bp GCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTaGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: AWLHSAHPGYLP*LKTHLVDVGRS
Trigger: GGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTCTCTGTGCTCCCAGGTaGTCCGGGGTATGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRLCAPR*SGVWVQ
Trigger: TTGCACCCATACCCCGGATCACCTGGGAGCACAGAG...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCTCAGCAGCAAGGCTaGGTAGTTGTAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAAQQQG*VVVDVW
Trigger: CCAGACATCTACAACTACTCAGCCTTGCTGCTGAGC...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTGCTCAGCAGCAAGGCTaGGTAGTTGTAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: GESLGRCRISLQSLLPDRAQQQG*VVVDVW
Trigger: CCAGACATCTACAACTACTCAGCCTTGCTGCTGAGC...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp TGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGCTCAGCAGCAAGGCTaGGTAGTTGTAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: WVPGFSTVPPLPIRWWPNAQQQG*VVVDVW
Trigger: CCAGACATCTACAACTACTCAGCCTTGCTGCTGAGC...ATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGCTTCTCGGAGATGTTaGGTGCGTTCACAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARASRRC*VRSQRR
Trigger: TCTTCGCTGTGAACGCACTCAACATCTCCGAGAAGC...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGCACCCGGATGTAGTTaGGGCACTCTGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARAPGCS*GTLSVL
Trigger: CAAAACAGACAGAGTGCCTCAACTACATCCGGGTGC...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCCCACAGACACCTCCGTaGAGAAGAAGTAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARPQTPP*RRSRPC
Trigger: ACAGGGTCTACTTCTTCTTCACGGAGGTGTCTGTGG...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCACCACAGACACCTCCGTaGAGAAGAAGTAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWAPQTPP*RRSRPC
Trigger: ACAGGGTCTACTTCTTCTTCACGGAGGTGTCTGTGG...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCACTGGCCGGGAGCAGATaGGTCGGGCTTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPLAGSR*VGLSGR
Trigger: CCTTCCTGAAAGCCCGACTCATCTGCTCCCGGCCAG...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCATCCCGCAGCACATTaGAGACCAAGCCGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RISLQSLLPDRRGGTCTHHPAAH*RPSRCL
Trigger: CAGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATG...GTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCATCCCGCAGCACATTaGAGACCAAGCCGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LPGGYRVSLLQLSHAFLQHPAAH*RPSRCL
Trigger: CAGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATG...CTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR TCA 90 bp GTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCATCAGGCCCGGGGACCTaGGCACGAAGACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: VPVMHLGVPWLSLQGGEASGPGT*ARRHPA
Trigger: TGCGGGATGTCTTCGTGCTCAGGTCCCCGGGCCTGA...TGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGCAGCGTGCTCGAGGCTaGTGGCTTTGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGQRARG*WLCAEL
Trigger: GAGCTCTGCACAAAGCCATCAGCCTCGAGCACGCTG...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCGTCTCCTCGATGATGTaGACAGCGTGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLVSSMM*TACSRL
Trigger: CAGCCTCGAGCACGCTGTTCACATCATCGAGGAGAC...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCTGTCTCCTCGATGATGTaGACAGCGTGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LVATGCPCYSFPTPSSSSVSSMM*TACSRL
Trigger: CAGCCTCGAGCACGCTGTTCACATCATCGAGGAGAC...AGAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR TCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCGCTGGGTCTCCTCGATaGTGTGAACAGCGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTAGSPR*CEQRAR
Trigger: TCGAGCACGCTGTTCACATCATCGAGGAGACCCAGC...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTTCGCCGCTCATCTCCTaGATCAAACCCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRSPLIS*IKPLLG
Trigger: CCCCAGCAGGGGTTTGATTCAGGAGATGAGCGGCGA...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCACGTCCTGCAGCCAGCTaGGTGCATGGGCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: VPVMHLGVPWLSLQGGEARPAAS*VHGPCH
Trigger: ATGGCAGGGCCCATGCACTCAGCTGGCTGCAGGACG...TGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp AGGGTCTTGTTGGGGTTGAGGTCGGTGTCAGGGACTCCTTCCTGGTGGCTACAGAGTCTTGTTCCCTGCTaGGGAGAGGACAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: RVLLGLRSVSGTPSWWLQSLVPC*GEDRAA
Trigger: CGCTGCTCTGTCCTCTCCTCAGCAGGGAACAAGACT...CTGTAGCCACCAGGAAGGAGTCCCTGACACCGACCTCAACCCCAACAAGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR TCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGAGTCTTGTTCCCTGCTaGGGAGAGGACAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRSLVPC*GEDRAA
Trigger: CGCTGCTCTGTCCTCTCCTCAGCAGGGAACAAGACT...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTGGGTCTTGTTGGGGTTaGGGTCGGTGTCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVGSCWG*GRCQGL
Trigger: GAGTCCCTGACACCGACCTCAACCCCAACAAGACCC...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp GGGCCTCTCGACTTGGGGTGCGGAGGGGGAACGTGTGGAGACAACCAGGGTGTCCAGGTTATGAGTATGTaGTGGTTCCGTGAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: GPLDLGCGGGTCGDNQGVQVMSM*WFREQD
Trigger: GTCTTGCTCACGGAACCATCACATACTCATAACCTG...GACACCCTGGTTGTCTCCACACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCCTGTGCCACCGTGCTTaGAAAAATGCTGCCGGTAAC +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARLCHRA*KNAAGN
Trigger: GTTACCGGCAGCATTTTTTCAAGCACGGTGGCACAG...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGTTCTGTCTGAACAACTaGCAAGGTGGGGGCCACTAC +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAFCLNN*QGGGHY
Trigger: GTAGTGGCCCCCACCTTGTCAGTTGTTCAGACAGAA...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCAATAGACAAGAGGACTaGGGTTGTCTGCACGATGCG +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFNRQED*GCLHDA
Trigger: CGCATCGTGCAGACAACCTCAGTCCTCTTGTCTATT...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTACAGCGCCGTATGCTTaGGGGTGCTGTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PGYLPLLKTHLVDVGRSSTAPYA*GCCGHS
Trigger: GCTGTGACCACAGCACCCTCAAGCATACGGCGCTGT...AGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGTGTGCTATTGCAGATaGGGCTCAGCGCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPVCYCR*GSAPQD
Trigger: GTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACAC...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGTGGCCGGGCAGGTGTaGTATTGCAGATGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRVAGQV*YCRCGS
Trigger: TGAGCCGCATCTGCAATAGCACACCTGCCCGGCCAC...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGTGGCCGGGCAGGTGTaGTATTGCAGATGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPVAGQV*YCRCGS
Trigger: TGAGCCGCATCTGCAATAGCACACCTGCCCGGCCAC...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTGTGGCCGGGCAGGTGTaGTATTGCAGATGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVVAGQV*YCRCGS
Trigger: TGAGCCGCATCTGCAATAGCACACCTGCCCGGCCAC...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCGATCCGGGGTATGGGTaGAAATGCCATCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AVFRAGLGKTVHSCGGPGDPGYG*KCHRCP
Trigger: GGGACAGCGATGGCATTTGCACCCATACCCCGGATC...GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCGATCCGGGGTATGGGTaGAAATGCCATCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GVRDSFLVATGCPCYSFPDPGYG*KCHRCP
Trigger: GGGACAGCGATGGCATTTGCACCCATACCCCGGATC...GGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGAGGTGCACCTCTCTGTaGTCCCAGGTGATCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGRCTSL*SQVIRG
Trigger: ACCCCGGATCACCTGGGAGCACAGAGAGGTGCACCT...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGCTCGGAGATGTTGAGTaGGTTCACAGCGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKLGDVE*VHSEDR
Trigger: GCGGTCTTCGCTGTGAACGCACTCAACATCTCCGAG...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCCTCGGAGATGTTGAGTaGGTTCACAGCGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: PGGYRVSLLQLSHAFLQLLGDVE*VHSEDR
Trigger: GCGGTCTTCGCTGTGAACGCACTCAACATCTCCGAG...GAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp CAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCCCCTTGCACACTCTTaGTATCCGTGGGATCAGCAC +
Preference number: 4 (lower is better)
Translates to: QGESLGRCRISLQSLLPDPLAHS*YPWDQH
Trigger: GTGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGG...GTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTGAGGTCCATTTCTTCTaGAAGGTCCTCAGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: RDSFLVATGCPCYSFPTPEVHFF*KVLRPP
Trigger: GGGCGGCCTGAGGACCTTGCAGAAGAAATGGACCTC...AGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCGTTGTAGGCGCACACTaGCGACAGCCCCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTVVGAH*RQPHVV
Trigger: AACAACGTGGGGCTGTCGGCAGTGTGCGCCTACAAC...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTTCCACTGTGGTGCTCTaGATGTACTTCCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPASTVVL*MYFPWE
Trigger: CTCCCACGGGAAGTACATGCAGAGCACCACAGTGGA...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGTGGTCTTTAACGAACTaGAGCGTCTTGTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPWSLTN*SVLSGK
Trigger: TTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCA...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACACAGTCCTCGCAGGTaGCGTGCTTCCCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPHSPRR*RASHRR
Trigger: CCTTCTGTGGGAAGCACGGCACCTGCGAGGACTGTG...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAGGGCTCTCGGTCTGGTaGAGAGCCACGCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRGLSVW*RATQVA
Trigger: AGCGACCTGCGTGGCTCTGCACCAGACCGAGAGCCC...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGGAGACCCTCGAGCTaGTGTCGGGCCCCGCACCCG +
Preference number: 4 (lower is better)
Translates to: FSCPSHASWSSLAKSAGRRRPSS*CRAPHP
Trigger: CGGGTGCGGGGCCCGACAGCAGCTCGAGGGTCTCCT...CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTAAGTTCCCCAGGGCGTaGACGTGCTGTGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVKFPRA*TCCAWS
Trigger: TGACCAGGCACAGCACGTGCACGCCCTGGGGAACTT...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGGCAGTGCATGGGTCTaGACAGGGACACAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQGSAWV*TGTQVS
Trigger: GGAGACCTGTGTCCCTGTGCAGACCCATGCACTGCC...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGGCCTTCCTCCAGCTCTaGATCATCCGGTCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGAFLQL*IIRSCS
Trigger: GGAGCACGACCGGATGATGCAGAGCTGGAGGAAGGC...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCGCTACAGGGTGTCCTTaGTACAGCTTTCCCACGCCT +
Preference number: 4 (lower is better)
Translates to: RCRISLQSLLPDRRGGTCATGCP*YSFPTP
Trigger: AGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGC...GCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGGCCATCCTGGTTACCTaGTTGTGCCAGACAGAACTT +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLAILVT*LCQTEL
Trigger: AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGC...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GAGCAAGACTGGCATCCTTGGCTGGATGGGCAAGCACACACCTCACAGGCAGCTTCAGCCTTCAGAGCCTaGTGCCTGACCGTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: EQDWHPWLDGQAHTSQAASAFRA*CLTVEE
Trigger: CTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGA...AGCTGCCTGTGAGGTGTGTGCTTGCCCATCCAGCCAAGGATGCCAGTCTTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCAGGCACCAGCGGGGATaGACAGCCGGCCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTRHQRG*TAGLSL
Trigger: GAGACTGAGGCCGGCTGTGCATCCCCGCTGGTGCCT...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AGAAGTTCCCCAGGGCGTGCACGTGCTGTGCCTGGTCACTCAGGAAGGGCGGCAGGAAGAAAAGGTTCGTaGCAATCTGGACAACAGGCG +
Preference number: 4 (lower is better)
Translates to: RSSPGRARAVPGHSGRAAGRKGS*QSGQQA
Trigger: CGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCC...TGCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGGGAACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACGCAGGGGCCAGGCCCTaGAGAATTACACTAGGACTG +
Preference number: 4 (lower is better)
Translates to: RISLQSLLPDRRGGTCTHAGARP*RITLGL
Trigger: CAGTCCTAGTGTAATTCTGCAGGGCCTGGCCCCTGC...GTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR GCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGTTGGAGGGGAGTAGATaGCACAGGCTGGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKLEGSR*HRLESS
Trigger: TGAGCTCTCCAGCCTGTGGCATCTACTCCCCTCCAA...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCGGCTGGAATGCGTTaGTCCCACACACGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPPAGMR*SHTRKG
Trigger: CCCTTTACGTGTGTGGGACCAACGCATTCCAGCCGG...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGTGGTCACAGGCCGGCTaGAATGCGTTGGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKWSQAG*NALVPH
Trigger: GTGTGGGACCAACGCATTCCAGCCGGCCTGTGACCA...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGGTCCTCAGAGGACTGTaGGAAGAATTTCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLVLRGL*EEFREM
Trigger: CATCTCCCGAAATTCTTCCCACAGTCCTCTGAGGAC...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCGTCCTCAGAGGACTGTaGGAAGAATTTCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAVLRGL*EEFREM
Trigger: CATCTCCCGAAATTCTTCCCACAGTCCTCTGAGGAC...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCCGTCGGGGCTGTCTaGGCTTTTTCGGATCACGTC +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPAVGAV*AFSDHV
Trigger: GACGTGATCCGAAAAAGCCCAGACAGCCCCGACGGC...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCAGCCGTCGGGGCTGTCTaGGCTTTTTCGGATCACGTC +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPAVGAV*AFSDHV
Trigger: GACGTGATCCGAAAAAGCCCAGACAGCCCCGACGGC...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACAGACCTCCTCGGCTGTaGACAGGTTGTAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: RISLQSLLPDRRGGTCTHRPPRL*TGCRRT
Trigger: TGTGCGCCTACAACCTGTCCACAGCCGAGGAGGTCT...GTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCAGACCTCCTCGGCTGTaGACAGGTTGTAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLRPPRL*TGCRRT
Trigger: TGTGCGCCTACAACCTGTCCACAGCCGAGGAGGTCT...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGACCTCCTCGGCTGTaGACAGGTTGTAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTRPPRL*TGCRRT
Trigger: TGTGCGCCTACAACCTGTCCACAGCCGAGGAGGTCT...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTAGACCTCCTCGGCTGTaGACAGGTTGTAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: RDSFLVATGCPCYSFPTPRPPRL*TGCRRT
Trigger: TGTGCGCCTACAACCTGTCCACAGCCGAGGAGGTCT...AGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCTGCATGTACTTCCCGTaGGAGAAGACCTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GALCQGESLGRCRISLQSCMYFP*EKTSSA
Trigger: AGCCGAGGAGGTCTTCTCCCACGGGAAGTACATGCA...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCGGGACTGCTCCACTGTaGTGCTCTGCATGTACTTCC +
Preference number: 4 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTGTAPL*CSACTS
Trigger: GGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCC...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCACGCACCCACTTGGTGTaGGACTGCTCCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPRTHLV*DCSTVV
Trigger: CACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCG...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAAGGAGCTGGTGTAGTTaGCGGCCCGTGCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPRSWCS*RPVPRC
Trigger: ACAGCGAGGCACGGGCCGCCAACTACACCAGCTCCT...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCGGGCCTGTTGTCTATTaGGGTTACCGAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAGPVVY*GYRVIH
Trigger: ATGGATGACTCGGTAACCCCAATAGACAACAGGCCC...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGTCCCATCCAGGGCCTaGGTCCGGTCCACCACGATC +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLVPSRA*VRSTTI
Trigger: GATCGTGGTGGACCGGACCCAGGCCCTGGATGGGAC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGTCCCATCCAGGGCCTaGGTCCGGTCCACCACGATC +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTVPSRA*VRSTTI
Trigger: GATCGTGGTGGACCGGACCCAGGCCCTGGATGGGAC...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAGACAGCAGCAGGGTCTaGACTGGCTCAAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPDSSRV*TGSKSW
Trigger: CCAGGACTTTGAGCCAGTCCAGACCCTGCTGCTGTC...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGACAGCAGCAGGGTCTaGACTGGCTCAAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ESLGRCRISLQSLLPDRRDSSRV*TGSKSW
Trigger: CCAGGACTTTGAGCCAGTCCAGACCCTGCTGCTGTC...TCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGAGAATCAAACCCCTGCTaGGGCTCTCGGTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARESNPC*GSRSGA
Trigger: TGCACCAGACCGAGAGCCCCAGCAGGGGTTTGATTC...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCGAATCAAACCCCTGCTaGGGCTCTCGGTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTESNPC*GSRSGA
Trigger: TGCACCAGACCGAGAGCCCCAGCAGGGGTTTGATTC...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTCTCCTGTCCCCCACATaGCCCAGACAGGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPLLSPT*PRQDRE
Trigger: TTCCCTGTCCTGTCTGGGCCATGTGGGGGACAGGAG...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCTGTCTGCAGGACCTGTaGCCTGGCAGAAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: RCRISLQSLLPDRRGGTCCLQDL*PGRRGR
Trigger: TCTACCTCTTCTGCCAGGCCACAGGTCCTGCAGACA...GCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACCATCGGGCAGTGCATaGGTCTGCACAGGGACACAG +
Preference number: 4 (lower is better)
Translates to: CRISLQSLLPDRRGGTCTPSGSA*VCTGTQ
Trigger: CTGTGTCCCTGTGCAGACCCATGCACTGCCCGATGG...TGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTCCATCGGGCAGTGCATaGGTCTGCACAGGGACACAG +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPPSGSA*VCTGTQ
Trigger: CTGTGTCCCTGTGCAGACCCATGCACTGCCCGATGG...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGAGCCAGCTGAGTGCATaGGCCCTGCCATCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVSQLSA*ALPSGS
Trigger: ACTGCCCGATGGCAGGGCCCATGCACTCAGCTGGCT...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CGATCTGTGCTGGCCATGCTAACCCTGTTGGCTATTAGGGGGTGGGGGCACTCTCTGGTCCACCTCTCCTaGTGGGTCACTTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: RSVLAMLTLLAIRGWGHSLVHLS*WVTSGL
Trigger: GAGACCTGAAGTGACCCACCAGGAGAGGTGGACCAG...AGAGTGCCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGCCAGCACAGATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGAGGCAGAGAGCTCTCTaGTCCACCTCTCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGRQRAL*STSPGG
Trigger: CCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCT...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACGGGACTCCTTCCTGGTaGCTACAGGGTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RISLQSLLPDRRGGTCTHGTPSW*LQGVLA
Trigger: AGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCC...GTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAAGGGACTCCTTCCTGGTaGCTACAGGGTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: WDGVGSAFRACCLTVEEEGTPSW*LQGVLA
Trigger: AGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCC...TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCGGGACTCCTTCCTGGTaGCTACAGGGTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCGTPSW*LQGVLA
Trigger: AGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCC...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTGGTGGCTGTGGTCAGTaGCAGCAGGGTCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPGGCGQ*QQGLVG
Trigger: CCCAACAAGACCCTGCTGCCACTGACCACAGCCACC...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGCCCATCAGGTGGTaGCCCAATGGCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCLPIRW*PNGCVQ
Trigger: CTGAACACAGCCATTGGGCCACCACCTGATGGGCAG...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGGGTCTTGTTGGGGTTGAGGTCGGTGTCAGGGACTCCTTCCTGGTGGCTACAGCTGCCCATCAGGTGGTaGCCCAATGGCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RVLLGLRSVSGTPSWWLQLPIRW*PNGCVQ
Trigger: CTGAACACAGCCATTGGGCCACCACCTGATGGGCAG...CTGTAGCCACCAGGAAGGAGTCCCTGACACCGACCTCAACCCCAACAAGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp GAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGACCTCTGCCCATCAGGTaGTGGCCCAATGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: ESLGRCRISLQSLLPDRRPLPIR*WPNGCV
Trigger: AACACAGCCATTGGGCCACCACCTGATGGGCAGAGG...TCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCCTCTGCCCATCAGGTaGTGGCCCAATGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: AVFRAGLGKTVHSCGGPGPLPIR*WPNGCV
Trigger: AACACAGCCATTGGGCCACCACCTGATGGGCAGAGG...GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTTGGCTATTAGGGGGTaGGGGCACTCTGTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSLAIRG*GHSVKG
Trigger: CCCCTTGACAGAGTGCCCCCACCCCCTAATAGCCAA...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACTGGCATCCTTGGCTaGATGGGCAAGCACACACCT +
Preference number: 4 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKTGILG*MGKHTP
Trigger: AGGTGTGTGCTTGCCCATCCAGCCAAGGATGCCAGT...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGTGCTTGGCGACCACTTaGAAGACCGTTTTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPCLATT*KTVLFL
Trigger: TAAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCA...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCCGCAGGATGTGCCGGTaGGCGCAGGCTTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTRRMCR*AQAWEE
Trigger: TTCCTCCCAAGCCTGCGCCCACCGGCACATCCTGCG...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCATTCTCCGAGTGGAGCTaGGGGACCGTGTTGATGACG +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPFSEWS*GTVLMT
Trigger: CGTCATCAACACGGTCCCCCAGCTCCACTCGGAGAA...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGCCGGTGTCCAGGGCTaGCTTGGGGTGCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTAGVQG*LGVLPI
Trigger: AATGGGGAGCACCCCAAGCCAGCCCTGGACACCGGC...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTaGGCCTTCTTCAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGTPCRP*AFFKYS
Trigger: GGAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGT...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTCAAAACCCACCTCGTaGATGTGGGAAGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFSKPTS*MWEGPL
Trigger: AAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGA...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAACATCTTCAGGACAGTaGCAGGAACAGCGCCGTATG +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGTSSGQ*QEQRRM
Trigger: CATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGT...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAACATGTGGAGGGATGTaGAGGATGCCCCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRTCGGM*RMPPPA
Trigger: GGCGGGCGGGGGCATCCTCCACATCCCTCCACATGT...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGACAGTTTCCCTCGGGATaGACCCACAATGAAAGCGTG +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGQFPSG*THNESV
Trigger: CACGCTTTCATTGTGGGTCCATCCCGAGGGAAACTG...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR TCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCATGTCAAAGCCCACTTaGTACTTCTTCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFMSKPT*YFFRAS
Trigger: TGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACAT...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTTCCCAGTTCTCCAGGTaGGGAGGGGTCGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLSQFSR*GGVALT
Trigger: GGTGAGAGCGACCCCTCCTCACCTGGAGAACTGGGA...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCGAACAGCGCGGTCCCTaGGAATCCACATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCEQRGP*ESTFPS
Trigger: ACTGGGAAATGTGGATTCTCAGGGACCGCGCTGTTC...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGGCTTCTCGGAGATGTTaGGTGCGTTCACAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKASRRC*VRSQRR
Trigger: TCTTCGCTGTGAACGCACTCAACATCTCCGAGAAGC...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp CTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACGCACCCGGATGTAGTTaGGGCACTCTGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LPIRWWPNGCVQSRLGQDAPGCS*GTLSVL
Trigger: CAAAACAGACAGAGTGCCTCAACTACATCCGGGTGC...GTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp CTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACCCACAGACACCTCCGTaGAGAAGAAGTAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: LPIRWWPNGCVQSRLGQDPQTPP*RRSRPC
Trigger: ACAGGGTCTACTTCTTCTTCACGGAGGTGTCTGTGG...GTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGACTGGCCGGGAGCAGATaGGTCGGGCTTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRLAGSR*VGLSGR
Trigger: CCTTCCTGAAAGCCCGACTCATCTGCTCCCGGCCAG...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGACATCCCGCAGCACATTaGAGACCAAGCCGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGHPAAH*RPSRCL
Trigger: CAGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATG...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGCAGCGTGCTCGAGGCTaGTGGCTTTGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVQRARG*WLCAEL
Trigger: GAGCTCTGCACAAAGCCATCAGCCTCGAGCACGCTG...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGACAGCGTGCTCGAGGCTaGTGGCTTTGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGQRARG*WLCAEL
Trigger: GAGCTCTGCACAAAGCCATCAGCCTCGAGCACGCTG...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGGTCTCCTCGATGATGTaGACAGCGTGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGVSSMM*TACSRL
Trigger: CAGCCTCGAGCACGCTGTTCACATCATCGAGGAGAC...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTTCGCCGCTCATCTCCTaGATCAAACCCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCSPLIS*IKPLLG
Trigger: CCCCAGCAGGGGTTTGATTCAGGAGATGAGCGGCGA...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGCAGAAGCTGAGCATTaGCGGGACAGAGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: GSHWDGVGSAFRACCLTVAEAEH*RDRGIN
Trigger: GTTTATGCCTCTGTCCCGTCAATGCTCAGCTTCTGC...TACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCGCTTGGGAGGAAGGGTaGTGGCCCCGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVAWEEG*WPRRRW
Trigger: CCACCTCCTCCGGGGCCATCACCCTTCCTCCCAAGC...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGTGTCCCAGTTGGACCTaGAGTGACTTGGGACAACTT +
Preference number: 4 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQCPSWT*SDLGQL
Trigger: AAGTTGTCCCAAGTCACTTCAGGTCCAACTGGGACA...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR GCA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGTGTGCTATTGCAGATaGGGCTCAGCGCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPVCYCR*GSAPQD
Trigger: GTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACAC...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTTGGGCAGGTGTGCTATTaGAGATGCGGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: HASWSSLAKSAGRRSSRLGQVCY*RCGSAP
Trigger: GGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCC...AAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AAGAGGACTGAGGTTGTCTGCACGATGCGGGCTAACCTACGCAGCACTGCACGAGATCCGGGGTATGGGTaGAAATGCCATCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KRTEVVCTMRANLRSTARDPGYG*KCHRCP
Trigger: GGGACAGCGATGGCATTTGCACCCATACCCCGGATC...TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTGATCCGGGGTATGGGTaGAAATGCCATCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPDPGYG*KCHRCP
Trigger: GGGACAGCGATGGCATTTGCACCCATACCCCGGATC...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGACAGGCCGGCTGGAATaGGTTGGTCCCACACACGTA +
Preference number: 4 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQTGRLE*VGPTHV
Trigger: TACGTGTGTGGGACCAACGCATTCCAGCCGGCCTGT...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp TTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAAGGATGTGTAGCTGTGTaGTGGGTCAAAGGGACATCT +
Preference number: 4 (lower is better)
Translates to: LGSRLLHCPASAHQVVAQGCVAV*WVKGTS
Trigger: AGATGTCCCTTTGACCCAGCACACAGCTACACATCC...TTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGGGATGTGTAGCTGTGTaGTGGGTCAAAGGGACATCT +
Preference number: 4 (lower is better)
Translates to: LHCPASAHQVVAQWLCSEGCVAV*WVKGTS
Trigger: AGATGTCCCTTTGACCCAGCACACAGCTACACATCC...CTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGGATGTGTAGCTGTGTaGTGGGTCAAAGGGACATCT +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAGCVAV*WVKGTS
Trigger: AGATGTCCCTTTGACCCAGCACACAGCTACACATCC...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GCCCACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGTTCAGCCAAGGGATTaGATATTCTGTCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: AHLGSRLLHCPASAHQVVVQPRD*IFCPQR
Trigger: CCTCTGAGGACAGAATATGCAATCCCTTGGCTGAAC...CACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTCCCCTTGCACACTCTTaGTATCCGTGGGATCAGCAC +
Preference number: 4 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSPLAHS*YPWDQH
Trigger: GTGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGG...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACCCCTTGCACACTCTTaGTATCCGTGGGATCAGCAC +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARPLAHS*YPWDQH
Trigger: GTGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGG...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CGGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCCCCTTGCACACTCTTaGTATCCGTGGGATCAGCAC +
Preference number: 4 (lower is better)
Translates to: RCQGLLPGGYRVSLLQLSPLAHS*YPWDQH
Trigger: GTGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGG...GGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACGCCCTGGTCCCCCTTaGACACTCTTGCTATCCGTG +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSRPGPP*TLLLSV
Trigger: CACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCG...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGACGCCCTGGTCCCCCTTaGACACTCTTGCTATCCGTG +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGRPGPP*TLLLSV
Trigger: CACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCG...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGAGGTCCATTTCTTCTaGAAGGTCCTCAGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPEVHFF*KVLRPP
Trigger: GGGCGGCCTGAGGACCTTGCAGAAGAAATGGACCTC...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGGAGGTCCATTTCTTCTaGAAGGTCCTCAGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGEVHFF*KVLRPP
Trigger: GGGCGGCCTGAGGACCTTGCAGAAGAAATGGACCTC...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGCTGTGGGGTGAAGAGTaGATAGAACACAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLALWGEE*IEHRHL
Trigger: AAGGTGCCTGTGTTCTATGCACTCTTCACCCCACAG...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGTTGTAGGCGCACACTaGCGACAGCCCCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQVVGAH*RQPHVV
Trigger: AACAACGTGGGGCTGTCGGCAGTGTGCGCCTACAAC...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCTCCACTGTGGTGCTCTaGATGTACTTCCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLSTVVL*MYFPWE
Trigger: CTCCCACGGGAAGTACATGCAGAGCACCACAGTGGA...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCACTGCTCCACTGTGGTaGTCTGCATGTACTTCCCGT +
Preference number: 4 (lower is better)
Translates to: GSAFRACCLTVEEEPAHTTAPLW*SACTSR
Trigger: ACGGGAAGTACATGCAGAGCACCACAGTGGAGCAGT...GGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACACTTGGTGTGGGACTaGTCCACTGTGGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPHLVWD*STVVLC
Trigger: GCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTG...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTCACTTGGTGTGGGACTaGTCCACTGTGGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPHLVWD*STVVLC
Trigger: GCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTG...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGTAGTTGGCGGCCCGTaGCTCGCTGTCGATGCACGC +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPVVGGP*LAVDAR
Trigger: GCGTGCATCGACAGCGAGGCACGGGCCGCCAACTAC...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCGGGCTCTCGGTCTGGTaGAGAGCCACGCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCGLSVW*RATQVA
Trigger: AGCGACCTGCGTGGCTCTGCACCAGACCGAGAGCCC...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTAGGAGACCCTCGAGCTaGTGTCGGGCCCCGCACCCG +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELRRPSS*CRAPHP
Trigger: CGGGTGCGGGGCCCGACAGCAGCTCGAGGGTCTCCT...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGCAGTGCATGGGTCTaGACAGGGACACAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVGSAWV*TGTQVS
Trigger: GGAGACCTGTGTCCCTGTGCAGACCCATGCACTGCC...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCACTGCAGCCAGCTGAGTaGATGGGCCCTGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPLQPAE*MGPAIG
Trigger: CCCGATGGCAGGGCCCATGCACTCAGCTGGCTGCAG...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp ACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACACTGCAGCCAGCTGAGTaGATGGGCCCTGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: TSSYQSLLAILVTCLCQTLQPAE*MGPAIG
Trigger: CCCGATGGCAGGGCCCATGCACTCAGCTGGCTGCAG...TGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GCCCACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGCTCATCACAGCAACCTaGACCTTCGAAGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: AHLGSRLLHCPASAHQVVLITAT*TFEVLF
Trigger: GAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAG...CACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGCCTTCCTCCAGCTCTaGATCATCCGGTCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPAFLQL*IIRSCS
Trigger: GGAGCACGACCGGATGATGCAGAGCTGGAGGAAGGC...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGAGCTACAGGGTGTCCTTaGTACAGCTTTCCCACGCCT +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARATGCP*YSFPTP
Trigger: AGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGC...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GAGCAAGACTGGCATCCTTGGCTGGATGGGCAAGCACACACCTCACAGGCAGCTGCTACAGGGTGTCCTTaGTACAGCTTTCCCACGCCT +
Preference number: 4 (lower is better)
Translates to: EQDWHPWLDGQAHTSQAAATGCP*YSFPTP
Trigger: AGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGC...AGCTGCCTGTGAGGTGTGTGCTTGCCCATCCAGCCAAGGATGCCAGTCTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp GGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCGCTACAGGGTGTCCTTaGTACAGCTTTCCCACGCCT +
Preference number: 4 (lower is better)
Translates to: GVRDSFLVATGCPCYSFPATGCP*YSFPTP
Trigger: AGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGC...GGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTCGTAGAGGAGGAACCTaGACACACCCTGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: GESLGRCRISLQSLLPDRRRGGT*THPAVL
Trigger: TAAAACAGCAGGGTGTGTGCAGGTTCCTCCTCTACG...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAAGACCCTTGGGTGGATaGCACCAACACTTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPRPLGG*HQHFGG
Trigger: GCCACCAAAGTGTTGGTGGCATCCACCCAAGGGTCT...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCTTGGTTCGCAGGATGTaGCGGTGGGCGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTLVRRM*RWAQAW
Trigger: CCAAGCCTGCGCCCACCGGCACATCCTGCGAACCAA...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGGGTGCTCCCCATTCTaGTGGGAGAAGCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLGCSPF*WEKLPG
Trigger: GCCAGGGAGCTTCTCCCAGCAGAATGGGGAGCACCC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAGGAAGAAAAGGTTCGTaGCAATCTGGACAACAGGCG +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGGRKGS*QSGQQA
Trigger: CGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCC...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCCAGGCTACCTTCCCTTaGTCAAAACCCACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTQATFP*SKPTSW
Trigger: CCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTG...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACAGGCTACCTTCCCTTaGTCAAAACCCACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKQATFP*SKPTSW
Trigger: CCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTG...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACAACTAGGACTGCCGAGTaGAGCACATCCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: CRISLQSLLPDRRGGTCTTRTAE*STSRMG
Trigger: GCCCATCCTGGATGTGCTGCACTCGGCAGTCCTAGT...TGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR GCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTACCCCACCATGGCCCTaGTGCCACACACATGTCCTG +
Preference number: 4 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCTPPWP*CHTHVL
Trigger: CAGGACATGTGTGTGGCAGCAGGGCCATGGTGGGGT...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGAAGTGGCGCTGAGTaGCTGCAGCACCCGGATGTA +
Preference number: 4 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPGSGAE*LQHPDV
Trigger: TACATCCGGGTGCTGCAGCCACTCAGCGCCACTTCC...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAGGAAGTGGCGCTGAGTaGCTGCAGCACCCGGATGTA +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGGSGAE*LQHPDV
Trigger: TACATCCGGGTGCTGCAGCCACTCAGCGCCACTTCC...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGCCGGCTGGAATGCGTTaGTCCCACACACGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQPAGMR*SHTRKG
Trigger: CCCTTTACGTGTGTGGGACCAACGCATTCCAGCCGG...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCCGGCTGGAATGCGTTaGTCCCACACACGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVPAGMR*SHTRKG
Trigger: CCCTTTACGTGTGTGGGACCAACGCATTCCAGCCGG...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTCCGGCTGGAATGCGTTaGTCCCACACACGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: PGYLPLLKTHLVDVGRSSPAGMR*SHTRKG
Trigger: CCCTTTACGTGTGTGGGACCAACGCATTCCAGCCGG...AGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGCCGGCTGGAATGCGTTaGTCCCACACACGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGPAGMR*SHTRKG
Trigger: CCCTTTACGTGTGTGGGACCAACGCATTCCAGCCGG...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGCCGTCGGGGCTGTCTaGGCTTTTTCGGATCACGTC +
Preference number: 4 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPAVGAV*AFSDHV
Trigger: GACGTGATCCGAAAAAGCCCAGACAGCCCCGACGGC...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTCACTCTTGCTATCCGTaGGATCAGCACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPAHSCYP*DQHPEH
Trigger: GTGTTCAGGGTGCTGATCCCACGGATAGCAAGAGTG...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTCCAGGCAGAGAGCTCTCTGGTCCACCTCTCCTGGTGGGTCACTTCAGGTCTCCACTCTTGCTATCCGTaGGATCAGCACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: LQAESSLVHLSWWVTSGLHSCYP*DQHPEH
Trigger: GTGTTCAGGGTGCTGATCCCACGGATAGCAAGAGTG...GAGACCTGAAGTGACCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAGTCCTCAGGCCGCCCTaGTCCCCCTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRVLRPP*SPLHTL
Trigger: AAGAGTGTGCAAGGGGGACCAGGGCGGCCTGAGGAC...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAGACCAAGCCGCTGTCTaGCCGGGAGCAGATGAGTCG +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRDQAAV*PGADES
Trigger: CGACTCATCTGCTCCCGGCCAGACAGCGGCTTGGTC...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGACCAAGCCGCTGTCTaGCCGGGAGCAGATGAGTCG +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLDQAAV*PGADES
Trigger: CGACTCATCTGCTCCCGGCCAGACAGCGGCTTGGTC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGACCAAGCCGCTGTCTaGCCGGGAGCAGATGAGTCG +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTDQAAV*PGADES
Trigger: CGACTCATCTGCTCCCGGCCAGACAGCGGCTTGGTC...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AAGAGGACTGAGGTTGTCTGCACGATGCGGGCTAACCTACGCAGCACTGCACGAAGACCTCCTCGGCTGTaGACAGGTTGTAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: KRTEVVCTMRANLRSTARRPPRL*TGCRRT
Trigger: TGTGCGCCTACAACCTGTCCACAGCCGAGGAGGTCT...TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAAGACCTCCTCGGCTGTaGACAGGTTGTAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPRPPRL*TGCRRT
Trigger: TGTGCGCCTACAACCTGTCCACAGCCGAGGAGGTCT...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGATGCATGTACTTCCCGTaGGAGAAGACCTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARCMYFP*EKTSSA
Trigger: AGCCGAGGAGGTCTTCTCCCACGGGAAGTACATGCA...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAATGCATGTACTTCCCGTaGGAGAAGACCTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: WDGVGSAFRACCLTVEEECMYFP*EKTSSA
Trigger: AGCCGAGGAGGTCTTCTCCCACGGGAAGTACATGCA...TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAAGGGACTGCTCCACTGTaGTGCTCTGCATGTACTTCC +
Preference number: 4 (lower is better)
Translates to: WDGVGSAFRACCLTVEEEGTAPL*CSACTS
Trigger: GGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCC...TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGCGCACCCACTTGGTGTaGGACTGCTCCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVRTHLV*DCSTVV
Trigger: CACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCG...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAATATAGCGCACCCACTTaGTGTGGGACTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKYSAPT*CGTAPL
Trigger: CAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATA...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGTATAGCGCACCCACTTaGTGTGGGACTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRYSAPT*CGTAPL
Trigger: CAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATA...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAAGGAGCTGGTGTAGTTaGCGGCCCGTGCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: VPVMHLGVPWLSLQGGEARSWCS*RPVPRC
Trigger: ACAGCGAGGCACGGGCCGCCAACTACACCAGCTCCT...TGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTGCAAATTCAAGGAGCTaGTGTAGTTGGCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: RDSFLVATGCPCYSFPTPANSRS*CSWRPV
Trigger: CACGGGCCGCCAACTACACCAGCTCCTTGAATTTGC...AGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGAGCAAATTCAAGGAGCTaGTGTAGTTGGCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARANSRS*CSWRPV
Trigger: CACGGGCCGCCAACTACACCAGCTCCTTGAATTTGC...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGACTGCAGCGTCTTGTCTaGCAAATTCAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGLQRLV*QIQGAG
Trigger: ACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAG...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAGGGCCTGTTGTCTATTaGGGTTACCGAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWAGPVVY*GYRVIH
Trigger: ATGGATGACTCGGTAACCCCAATAGACAACAGGCCC...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCAAGGCCAGCGGGGCCTaGACCACGCCCGAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCKASGA*TTPELE
Trigger: CTCTAACTCGGGCGTGGTCCAGGCCCCGCTGGCCTT...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGCTCCTGTCCCCCACATaGCCCAGACAGGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVLLSPT*PRQDRE
Trigger: TTCCCTGTCCTGTCTGGGCCATGTGGGGGACAGGAG...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAACCCCGCACCCGAGGCTaGCCAGGGGGTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKPRTRG*PGGPGR
Trigger: TCTCCCTGGACCCCCTGGCCAGCCTCGGGTGCGGGG...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp ACGTGTGGAGACAACCAGGGTGTCTCCAGCATCTTCAGGACACCTGTTGTGATGTGCACGTGCTGTGCCTaGTCACTCAGGAAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TCGDNQGVSSIFRTPVVMCTCCA*SLRKGG
Trigger: GCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCA...CATCACAACAGGTGTCCTGAAGATGCTGGAGACACCCTGGTTGTCTCCACACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp GCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCTGTCTGCAGGACCTGTaGCCTGGCAGAAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: AVFRAGLGKTVHSCGGPGCLQDL*PGRRGR
Trigger: TCTACCTCTTCTGCCAGGCCACAGGTCCTGCAGACA...GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAAGTCCACCTCTCCTGGTaGGTCACTTCAGGTCTCATC +
Preference number: 4 (lower is better)
Translates to: WDGVGSAFRACCLTVEEEVHLSW*VTSGLI
Trigger: GATGAGACCTGAAGTGACCCACCAGGAGAGGTGGAC...TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTGTCCACCTCTCCTGGTaGGTCACTTCAGGTCTCATC +
Preference number: 4 (lower is better)
Translates to: GTPSWWLQGVLATAFPRLVHLSW*VTSGLI
Trigger: GATGAGACCTGAAGTGACCCACCAGGAGAGGTGGAC...AAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTCTGGTCCACCTCTCCTaGTGGGTCACTTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPLVHLS*WVTSGL
Trigger: GAGACCTGAAGTGACCCACCAGGAGAGGTGGACCAG...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTGGGACTCCTTCCTGGTaGCTACAGGGTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVGTPSW*LQGVLA
Trigger: AGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCC...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GAGCAAGACTGGCATCCTTGGCTGGATGGGCAAGCACACACCTCACAGGCAGCTTCAGGGACTCCTTCCTaGTGGCTACAGGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: EQDWHPWLDGQAHTSQAASGTPS*WLQGVL
Trigger: AAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGA...AGCTGCCTGTGAGGTGTGTGCTTGCCCATCCAGCCAAGGATGCCAGTCTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp GCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCTCAGGGACTCCTTCCTaGTGGCTACAGGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: AVFRAGLGKTVHSCGGPGSGTPS*WLQGVL
Trigger: AAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGA...GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCAGGGACTCCTTCCTaGTGGCTACAGGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSSGTPS*WLQGVL
Trigger: AAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGA...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGTCAGGGACTCCTTCCTaGTGGCTACAGGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRSGTPS*WLQGVL
Trigger: AAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGA...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGTGGCTGTGGTCAGTaGCAGCAGGGTCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPGGCGQ*QQGLVG
Trigger: CCCAACAAGACCCTGCTGCCACTGACCACAGCCACC...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCACTCCGGGGGTGGCTGTaGTCAGTGGCAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPLRGWL*SVAAGS
Trigger: AGACCCTGCTGCCACTGACCACAGCCACCCCCGGAG...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGCAGGTGGTGGCCCAATaGCTGTGTTCAGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGQVVAQ*LCSEQA
Trigger: AGCCTGCTCTGAACACAGCCATTGGGCCACCACCTG...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTCTGCCCATCAGGTGGTaGCCCAATGGCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPLPIRW*PNGCVQ
Trigger: CTGAACACAGCCATTGGGCCACCACCTGATGGGCAG...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTCCTCTGCCCATCAGGTaGTGGCCCAATGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPPLPIR*WPNGCV
Trigger: AACACAGCCATTGGGCCACCACCTGATGGGCAGAGG...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGATGTCACAGGCCCACTTaGGTTCCAGGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARCHRPT*VPGFST
Trigger: AGTGGAGAAGCCTGGAACCCAAGTGGGCCTGTGACA...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACTGTCACAGGCCCACTTaGGTTCCAGGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: RISLQSLLPDRRGGTCTHCHRPT*VPGFST
Trigger: AGTGGAGAAGCCTGGAACCCAAGTGGGCCTGTGACA...GTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAACATCTTGGAGTTCCTTaGCTAAGTCTGCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LGSRLLHCPASAHQVVAQHLGVP*LSLQGG
Trigger: TCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATG...TTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTGCTGGGAAGACACTCAGTATTTGCTAGGATCACCAGAGGGGTGCGGCTTGACCGGAGGGGGAACGTGTaGAGACAACCAGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: LLGRHSVFARITRGVRLDRRGNV*RQPGCL
Trigger: GAGACACCCTGGTTGTCTCCACACGTTCCCCCTCCG...GTCAAGCCGCACCCCTCTGGTGATCCTAGCAAATACTGAGTGTCTTCCCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGGCATCCTTGGCTGGATaGGCAAGCACACACCTCACA +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRASLAG*ASTHLT
Trigger: TGTGAGGTGTGTGCTTGCCCATCCAGCCAAGGATGC...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAGAACAACTGACAAGGTaGGGGCCACTACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPEQLTR*GPLRAL
Trigger: CAAAGCCCGTAGTGGCCCCCACCTTGTCAGTTGTTC...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCTGGCCCCGGAGGAGGTaGCCTGCACGGCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVWPRRR*PARLGL
Trigger: CAACCCCAGCCGTGCAGGCCACCTCCTCCGGGGCCA...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTTTCTCCGAGTGGAGCTaGGGGACCGTGTTGATGACG +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRFSEWS*GTVLMT
Trigger: CGTCATCAACACGGTCCCCCAGCTCCACTCGGAGAA...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACAAAGGGCTTGTCCCTaGCAGAAAGGTCGTCGATCC +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKQRACP*QKGRRS
Trigger: GGATCGACGACCTTTCTGCCAGGGACAAGCCCTTTG...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCCAAAGGGCTTGTCCCTaGCAGAAAGGTCGTCGATCC +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTQRACP*QKGRRS
Trigger: GGATCGACGACCTTTCTGCCAGGGACAAGCCCTTTG...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTaGGAAGGTCCTCTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKPTSWM*EGPLLR
Trigger: TCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGG...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTATACAAAGCGGGGAGATaGAGTGTGAAATTAACCAGT +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVYKAGR*SVKLTS
Trigger: ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTA...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACTTGAGCATGGACTCTaGGCCCGACATTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARLEHGL*ARHWPL
Trigger: AAGTGGCCAATGTCGGGCCCAGAGTCCATGCTCAAG...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGGCAGCACATCCAGGATaGGCTTCCAGCCTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRAAHPG*ASSLEH
Trigger: ATGCTCAAGGCTGGAAGCCCATCCTGGATGTGCTGC...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp CAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACATTGAGACACTGGGGTaGGCTTGGAGGGGAGTAGAT +
Preference number: 4 (lower is better)
Translates to: QGESLGRCRISLQSLLPDIETLG*AWRGVD
Trigger: ATCTACTCCCCTCCAAGCCCACCCCAGTGTCTCAAT...GTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAGGCCCAACTCACCTGTaGCCTGGCAGAAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGGPTHL*PGRRGR
Trigger: TCTACCTCTTCTGCCAGGCCACAGGTGAGTTGGGCC...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR TCA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCATCCCAGTTCTCCAGGTaGGGAGGGGTCGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEASQFSR*GGVALT
Trigger: GGTGAGAGCGACCCCTCCTCACCTGGAGAACTGGGA...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGGAACAGCGCGGTCCCTaGGAATCCACATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQEQRGP*ESTFPS
Trigger: ACTGGGAAATGTGGATTCTCAGGGACCGCGCTGTTC...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTGAACAGCGCGGTCCCTaGGAATCCACATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPEQRGP*ESTFPS
Trigger: ACTGGGAAATGTGGATTCTCAGGGACCGCGCTGTTC...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp GGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTGCTCAGCAGCAAGGCTaGGTAGTTGTAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: GTPSWWLQGVLATAFPRLAQQQG*VVVDVW
Trigger: CCAGACATCTACAACTACTCAGCCTTGCTGCTGAGC...AAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR TCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCGCTTCTCGGAGATGTTaGGTGCGTTCACAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCASRRC*VRSQRR
Trigger: TCTTCGCTGTGAACGCACTCAACATCTCCGAGAAGC...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCGCTTCTCGGAGATGTTaGGTGCGTTCACAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: AVFRAGLGKTVHSCGGPGASRRC*VRSQRR
Trigger: TCTTCGCTGTGAACGCACTCAACATCTCCGAGAAGC...GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGGCACCCGGATGTAGTTaGGGCACTCTGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRAPGCS*GTLSVL
Trigger: CAAAACAGACAGAGTGCCTCAACTACATCCGGGTGC...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp CGGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCGCACCCGGATGTAGTTaGGGCACTCTGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: RCQGLLPGGYRVSLLQLSAPGCS*GTLSVL
Trigger: CAAAACAGACAGAGTGCCTCAACTACATCCGGGTGC...GGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR TCA 90 bp CCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCGTTCTCCATCAACCATaGCGGATGTGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PGGYRVSLLQLSHAFLQLVLHQP*RMCSCV
Trigger: CACACAGCTACACATCCGTCATGGTTGATGGAGAAC...GAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR TCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCACAGACACCTCCGTaGAGAAGAAGTAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRPQTPP*RRSRPC
Trigger: ACAGGGTCTACTTCTTCTTCACGGAGGTGTCTGTGG...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCCCACAGACACCTCCGTaGAGAAGAAGTAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTPQTPP*RRSRPC
Trigger: ACAGGGTCTACTTCTTCTTCACGGAGGTGTCTGTGG...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGCATCCCGCAGCACATTaGAGACCAAGCCGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVHPAAH*RPSRCL
Trigger: CAGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATG...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp CACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTCAGGCCCGGGGACCTaGGCACGAAGACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: HPAVLVHEQLSKPVSHPGSGPGT*ARRHPA
Trigger: TGCGGGATGTCTTCGTGCTCAGGTCCCCGGGCCTGA...ACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGTCTCCTCGATGATGTaGACAGCGTGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVVSSMM*TACSRL
Trigger: CAGCCTCGAGCACGCTGTTCACATCATCGAGGAGAC...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGCTGGGTCTCCTCGATaGTGTGAACAGCGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVAGSPR*CEQRAR
Trigger: TCGAGCACGCTGTTCACATCATCGAGGAGACCCAGC...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAACTCAGCGCTTTCCCTaGTGGCGTCCTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPTQRFP*WRPAAS
Trigger: GCTGGCTGCAGGACGCCATCAGGGAAAGCGCTGAGT...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp ATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTTGGGGTCTTGTTGGGGTTaGGGTCGGTGTCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: MHLGVPWLSLQGGEAAGLGSCWG*GRCQGL
Trigger: GAGTCCCTGACACCGACCTCAACCCCAACAAGACCC...CAAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACGCAGAAGCTGAGCATTaGCGGGACAGAGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: RISLQSLLPDRRGGTCTHAEAEH*RDRGIN
Trigger: GTTTATGCCTCTGTCCCGTCAATGCTCAGCTTCTGC...GTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCAGAGGGGTGCGGCTTaGCTTTTAACAGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCQRGAA*LLTEAL
Trigger: CAAAGCCTCTGTTAAAAGTCAAGCCGCACCCCTCTG...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp TGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACAGCAGGCGATGTATGCTaGTCCCACACAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CRISLQSLLPDRRGGTCTAGDVC*SHTKAG
Trigger: ACCAGCCTTTGTGTGGGATCAGCATACATCGCCTGC...TGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGTCTCCATCTGCGTCTaGGTCAGCGAACTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRVSICV*VSELQL
Trigger: GAGCTGAAGTTCGCTGACTCAGACGCAGATGGAGAC...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGACCAAAGGCGCCCTTGTaGAGGTTCCATCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGPKAPL*RFHLSH
Trigger: GTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGG...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTACAGCGCCGTATGCTTaGGGGTGCTGTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLTAPYA*GCCGHS
Trigger: GCTGTGACCACAGCACCCTCAAGCATACGGCGCTGT...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp ATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTTGGTGTGCTATTGCAGATaGGGCTCAGCGCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: MHLGVPWLSLQGGEAAGLVCYCR*GSAPQD
Trigger: GTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACAC...CAAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACGTGTGCTATTGCAGATaGGGCTCAGCGCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HEQLSKPVSHPGYLLVPDVCYCR*GSAPQD
Trigger: GTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACAC...GTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCGGGTATGGGTGCAAATaGCATCGCTGTCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: GALCQGESLGRCRISLQSGYGCK*HRCPKH
Trigger: ATGTTTGGGACAGCGATGGCATTTGCACCCATACCC...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGAGGTGCACCTCTCTGTaGTCCCAGGTGATCCGGGGT +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLRCTSL*SQVIRG
Trigger: ACCCCGGATCACCTGGGAGCACAGAGAGGTGCACCT...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTCTCGGAGATGTTGAGTaGGTTCACAGCGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRLGDVE*VHSEDR
Trigger: GCGGTCTTCGCTGTGAACGCACTCAACATCTCCGAG...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGACTCGGAGATGTTGAGTaGGTTCACAGCGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGLGDVE*VHSEDR
Trigger: GCGGTCTTCGCTGTGAACGCACTCAACATCTCCGAG...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCCAATACACCTCATGCTaGTTCTCGGAGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFQYTSC*FSEMLS
Trigger: ACTCAACATCTCCGAGAAGCAGCATGAGGTGTATTG...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAACAGGCCGGCTGGAATaGGTTGGTCCCACACACGTA +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGTGRLE*VGPTHV
Trigger: TACGTGTGTGGGACCAACGCATTCCAGCCGGCCTGT...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCAACAGGCCGGCTGGAATaGGTTGGTCCCACACACGTA +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSTGRLE*VGPTHV
Trigger: TACGTGTGTGGGACCAACGCATTCCAGCCGGCCTGT...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGACAGGCCGGCTGGAATaGGTTGGTCCCACACACGTA +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVTGRLE*VGPTHV
Trigger: TACGTGTGTGGGACCAACGCATTCCAGCCGGCCTGT...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAGTTCAGCCAAGGGATTaGATATTCTGTCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGVQPRD*IFCPQR
Trigger: CCTCTGAGGACAGAATATGCAATCCCTTGGCTGAAC...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTCCCCTTGCACACTCTTaGTATCCGTGGGATCAGCAC +
Preference number: 4 (lower is better)
Translates to: PGYLPLLKTHLVDVGRSSPLAHS*YPWDQH
Trigger: GTGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGG...AGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGTGGGGTGAAGAGTaGATAGAACACAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: GSAFRACCLTVEEEPAHTLWGEE*IEHRHL
Trigger: AAGGTGCCTGTGTTCTATGCACTCTTCACCCCACAG...GGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGTTGTAGGCGCACACTaGCGACAGCCCCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPVVGAH*RQPHVV
Trigger: AACAACGTGGGGCTGTCGGCAGTGTGCGCCTACAAC...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTTCCACTGTGGTGCTCTaGATGTACTTCCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVSTVVL*MYFPWE
Trigger: CTCCCACGGGAAGTACATGCAGAGCACCACAGTGGA...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTCCACTGTGGTGCTCTaGATGTACTTCCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQSTVVL*MYFPWE
Trigger: CTCCCACGGGAAGTACATGCAGAGCACCACAGTGGA...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGAACTGCTCCACTGTGGTaGTCTGCATGTACTTCCCGT +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARTAPLW*SACTSR
Trigger: ACGGGAAGTACATGCAGAGCACCACAGTGGAGCAGT...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCGTAGTTGGCGGCCCGTaGCTCGCTGTCGATGCACGC +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVVVGGP*LAVDAR
Trigger: GCGTGCATCGACAGCGAGGCACGGGCCGCCAACTAC...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGGTCTTTAACGAACTaGAGCGTCTTGTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLWSLTN*SVLSGK
Trigger: TTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCA...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAAAGTTCCCCAGGGCGTaGACGTGCTGTGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRKFPRA*TCCAWS
Trigger: TGACCAGGCACAGCACGTGCACGCCCTGGGGAACTT...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTGACAAAGCGAATGTCTaGAGGACCTGTGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPDKANV*RTCGLA
Trigger: TGCCAGGCCACAGGTCCTGCAGACATTCGCTTTGTC...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp ACCTGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCTGCAGCCAGCTGAGTaGATGGGCCCTGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: TCTHPAVLVHEQLSKPVSLQPAE*MGPAIG
Trigger: CCCGATGGCAGGGCCCATGCACTCAGCTGGCTGCAG...GCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCACTCATCACAGCAACCTaGACCTTCGAAGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWALITAT*TFEVLF
Trigger: GAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAG...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTCATCACAGCAACCTaGACCTTCGAAGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRLITAT*TFEVLF
Trigger: GAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAG...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTCCACTGTCCCGCCTCTaGCCATCAGGTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: HPAVLVHEQLSKPVSHPGPLSRL*PSGGGP
Trigger: TGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGG...ACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGGCCATCCTGGTTACCTaGTTGTGCCAGACAGAACTT +
Preference number: 4 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKAILVT*LCQTEL
Trigger: AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGC...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGCCTTCAGAGCCTGCTaGCTGACCGTAGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCAFRAC*LTVEEE
Trigger: TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGC...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGTTCTTGTCCCAGTCATaGATCTTGGAGTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRFLSQS*ILEFLG
Trigger: GCCAAGGAACTCCAAGATGCATGACTGGGACAAGAA...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCGGATCACCAGAGGGGTaGGGCTTGACTTTTAACAGA +
Preference number: 4 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTGSPEG*GLTFNR
Trigger: TCTGTTAAAAGTCAAGCCGCACCCCTCTGGTGATCC...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCTTCACTTCCAGGACGTaGTTGGCGACCACTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLFTSRT*LATTWK
Trigger: CTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGTGAA...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGGTTCGCAGGATGTaGCGGTGGGCGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCLVRRM*RWAQAW
Trigger: CCAAGCCTGCGCCCACCGGCACATCCTGCGAACCAA...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp ACACTAGAAGTGGCTTCACACTGTCTACAGTTTCCCTCGGGATGGACCCACAATAGGCACCAGCGGGGATaGACAGCCGGCCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TLEVASHCLQFPSGWTHNRHQRG*TAGLSL
Trigger: GAGACTGAGGCCGGCTGTGCATCCCCGCTGGTGCCT...ATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGTGAAGCCACTTCTAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAAGGTTGTCTGCACGATaGGGGCTAACCTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPRLSAR*GLTYAA
Trigger: TGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCT...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAAGGACTGAGGTTGTCTaGACGATGCGGGCTAACCTA +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPRTEVV*TMRANL
Trigger: TAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCT...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAGGGAAGCTGAAGGGATaGTCTTCTCAGCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPGKLKG*SSQPTE
Trigger: CTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTCCC...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAAGGAACAGCGCCGTATaGTTGAGGGTGCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPRNSAV*LRVLWS
Trigger: TGACCACAGCACCCTCAAGCATACGGCGCTGTTCCT...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCAAGGAACAGCGCCGTATaGTTGAGGGTGCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPRNSAV*LRVLWS
Trigger: TGACCACAGCACCCTCAAGCATACGGCGCTGTTCCT...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGGTCCTGTGGACTTCCTaGTCTTTGACCTTAATTGCC +
Preference number: 4 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRVLWTS*SLTLIA
Trigger: GGCAATTAAGGTCAAAGAGCAGGAAGTCCACAGGAC...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR GCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCACAGGGATCGTGGGGTaGAGTAGCAGCACCAACAAT +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLTGIVG*SSSTNN
Trigger: ATTGTTGGTGCTGCTACTGCACCCCACGATCCCTGT...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGGAAGTGGCGCTGAGTaGCTGCAGCACCCGGATGTA +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLGSGAE*LQHPDV
Trigger: TACATCCGGGTGCTGCAGCCACTCAGCGCCACTTCC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACCGGCTGGAATGCGTTaGTCCCACACACGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSPAGMR*SHTRKG
Trigger: CCCTTTACGTGTGTGGGACCAACGCATTCCAGCCGG...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCATGGTCACAGGCCGGCTaGAATGCGTTGGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: VPVMHLGVPWLSLQGGEAWSQAG*NALVPH
Trigger: GTGTGGGACCAACGCATTCCAGCCGGCCTGTGACCA...TGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTCCAGGCAGAGAGCTCTCTGGTCCACCTCTCCTGGTGGGTCACTTCAGGTCTCGATGTTAAGTTCAGGTaGTCACAGGCCGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LQAESSLVHLSWWVTSGLDVKFR*SQAGWN
Trigger: ATTCCAGCCGGCCTGTGACCACCTGAACTTAACATC...GAGACCTGAAGTGACCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp CCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCGTCCTCAGAGGACTGTaGGAAGAATTTCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: PGGYRVSLLQLSHAFLQLVLRGL*EEFREM
Trigger: CATCTCCCGAAATTCTTCCCACAGTCCTCTGAGGAC...GAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGGCCGTCGGGGCTGTCTaGGCTTTTTCGGATCACGTC +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLAVGAV*AFSDHV
Trigger: GACGTGATCCGAAAAAGCCCAGACAGCCCCGACGGC...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCAGTCCTCAGGCCGCCCTaGTCCCCCTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEAVLRPP*SPLHTL
Trigger: AAGAGTGTGCAAGGGGGACCAGGGCGGCCTGAGGAC...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAGGGACTGCTCCACTGTaGTGCTCTGCATGTACTTCC +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGGTAPL*CSACTS
Trigger: GGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCC...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCCGCACCCACTTGGTGTaGGACTGCTCCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTRTHLV*DCSTVV
Trigger: CACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCG...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCATATAGCGCACCCACTTaGTGTGGGACTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPYSAPT*CGTAPL
Trigger: CAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATA...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCCTGCAGCGTCTTGTCTaGCAAATTCAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTLQRLV*QIQGAG
Trigger: ACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAG...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGCAGCAGGGTCTGGACTaGCTCAAAGTCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQQQGLD*LKVLEE
Trigger: CTCTTCCAGGACTTTGAGCCAGTCCAGACCCTGCTG...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTCAGCAGGGTCTGGACTaGCTCAAAGTCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRQQGLD*LKVLEE
Trigger: CTCTTCCAGGACTTTGAGCCAGTCCAGACCCTGCTG...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAGACAGCAGCAGGGTCTaGACTGGCTCAAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGDSSRV*TGSKSW
Trigger: CCAGGACTTTGAGCCAGTCCAGACCCTGCTGCTGTC...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCAGACAGCAGCAGGGTCTaGACTGGCTCAAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSDSSRV*TGSKSW
Trigger: CCAGGACTTTGAGCCAGTCCAGACCCTGCTGCTGTC...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp ACCTGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCTGGGGCTCTCGGTCTaGTGCAGAGCCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: TCTHPAVLVHEQLSKPVSLGLSV*CRATQV
Trigger: GACCTGCGTGGCTCTGCACCAGACCGAGAGCCCCAG...GCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAAGCCAGCTGAGTGCATaGGCCCTGCCATCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TSSYQSLLAILVTCLCQTSQLSA*ALPSGS
Trigger: ACTGCCCGATGGCAGGGCCCATGCACTCAGCTGGCT...TGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTCTGGTCCACCTCTCCTaGTGGGTCACTTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCLVHLS*WVTSGL
Trigger: GAGACCTGAAGTGACCCACCAGGAGAGGTGGACCAG...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGGCAGAGAGCTCTCTaGTCCACCTCTCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: HEQLSKPVSHPGYLLVPDRQRAL*STSPGG
Trigger: CCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCT...GTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TCCAGCATCTTCAGGACACCTGTTGTGATGGATCCTGAAGGAATTAGCAGGCGAGGCCTTCTCCGGGGGTaGCTGTGGTCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSIFRTPVVMDPEGISRRGLLRG*LWSVAA
Trigger: TGCTGCCACTGACCACAGCCACCCCCGGAGAAGGCC...TCGCCTGCTAATTCCTTCAGGATCCATCACAACAGGTGTCCTGAAGATGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp ACCTGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCGGCCTTCTCCGGGGGTaGCTGTGGTCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TCTHPAVLVHEQLSKPVSGLLRG*LWSVAA
Trigger: TGCTGCCACTGACCACAGCCACCCCCGGAGAAGGCC...GCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTTGTTCAGAGCAGGCTTaGGCAAGACAGTTCACAGTT +
Preference number: 4 (lower is better)
Translates to: GESLGRCRISLQSLLPDRCSEQA*ARQFTV
Trigger: AACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACA...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTCAGGTGGTGGCCCAATaGCTGTGTTCAGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCQVVAQ*LCSEQA
Trigger: AGCCTGCTCTGAACACAGCCATTGGGCCACCACCTG...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCACTGCCCATCAGGTGGTaGCCCAATGGCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPLPIRW*PNGCVQ
Trigger: CTGAACACAGCCATTGGGCCACCACCTGATGGGCAG...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGTGTCACAGGCCCACTTaGGTTCCAGGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGCHRPT*VPGFST
Trigger: AGTGGAGAAGCCTGGAACCCAAGTGGGCCTGTGACA...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCAGTCAAGGGGAGTCACTaGGACGGTGTAGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSVKGSH*DGVGSA
Trigger: GGCTGATCCTACACCGTCCCAGTGACTCCCCTTGAC...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTCCCAGTCATGCATCTTaGAGTTCCTTGGCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: GESLGRCRISLQSLLPDRPSHAS*SSLAKS
Trigger: AGACTTAGCCAAGGAACTCCAAGATGCATGACTGGG...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACTGGCATCCTTGGCTaGATGGGCAAGCACACACCT +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGTGILG*MGKHTP
Trigger: AGGTGTGTGCTTGCCCATCCAGCCAAGGATGCCAGT...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCAGGTTGGATTTTTaGGAGCATTTCAGTTCCGCT +
Preference number: 4 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAARLDF*EHFSSA
Trigger: AGCGGAACTGAAATGCTCCCAAAAATCCAACCTGGC...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGATTCAACACGCCATTCTaGAACTTCCAAAAGACCCGG +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGFNTPF*NFQKTR
Trigger: CCGGGTCTTTTGGAAGTTCCAGAATGGCGTGTTGAA...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTTCCTCTGACAGGCACTaGTACACCCCACTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRSSDRH*YTPLSP
Trigger: AGGAGACAGTGGGGTGTACCAGTGCCTGTCAGAGGA...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTGCTTGGCGACCACTTaGAAGACCGTTTTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFCLATT*KTVLFL
Trigger: TAAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCA...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGGGCCACTACGGGCTTTaGAACCACCTTCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKGHYGL*NHLHFQ
Trigger: CTGGAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCC...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGGCCACTACGGGCTTTaGAACCACCTTCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRGHYGL*NHLHFQ
Trigger: CTGGAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCC...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAAGAGAAGACCCTTGGGTaGATGCCACCAACACTTTGG +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKEKTLG*MPPTLW
Trigger: CCAAAGTGTTGGTGGCATCCACCCAAGGGTCTTCTC...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCAATGGTTTTCTCCGAGTaGAGCTGGGGGACCGTGTTG +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPMVFSE*SWGTVL
Trigger: CAACACGGTCCCCCAGCTCCACTCGGAGAAAACCAT...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAATGGTTTTCTCCGAGTaGAGCTGGGGGACCGTGTTG +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGMVFSE*SWGTVL
Trigger: CAACACGGTCCCCCAGCTCCACTCGGAGAAAACCAT...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAATGGTTTTCTCCGAGTaGAGCTGGGGGACCGTGTTG +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPMVFSE*SWGTVL
Trigger: CAACACGGTCCCCCAGCTCCACTCGGAGAAAACCAT...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGAAGTTCCCCAGGGCGTGCACGTGCTGTGCCTGGTCACTCAGGAAGGGCGGCAATTTCAAGCACTGTCTaGGCAGGTATCCCTTATAGC +
Preference number: 4 (lower is better)
Translates to: RSSPGRARAVPGHSGRAAISSTV*AGIPYS
Trigger: GCTATAAGGGATACCTGCCCAGACAGTGCTTGAAAT...TGCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGGGAACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGCAAAGGGCTTGTCCCTaGCAGAAAGGTCGTCGATCC +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKQRACP*QKGRRS
Trigger: GGATCGACGACCTTTCTGCCAGGGACAAGCCCTTTG...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGAAAACTCTCCACGCCTaGACACGTCGCAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLKTLHA*TRRSRG
Trigger: GCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTT...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACCCACCTCGTGGATGTaGGAAGGTCCTCTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPPTSWM*EGPLLR
Trigger: TCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGG...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCATCTGACCGACAGCTGTaGGCTCCAGATTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPSDRQL*APDCTA
Trigger: TGCGGTACAATCTGGAGCCCACAGCTGTCGGTCAGA...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCATCTGACCGACAGCTGTaGGCTCCAGATTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPSDRQL*APDCTA
Trigger: TGCGGTACAATCTGGAGCCCACAGCTGTCGGTCAGA...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGTCTGACCGACAGCTGTaGGCTCCAGATTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKSDRQL*APDCTA
Trigger: TGCGGTACAATCTGGAGCCCACAGCTGTCGGTCAGA...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCACATCTTCAGGACAGTaGCAGGAACAGCGCCGTATG +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTTSSGQ*QEQRRM
Trigger: CATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGT...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTACAAATCCTATCATGCTaGAAGATAAGACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVQILSC*KIRLST
Trigger: TGTGGACAGTCTTATCTTCCAGCATGATAGGATTTG...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGCAAATCCTATCATGCTaGAAGATAAGACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPQILSC*KIRLST
Trigger: TGTGGACAGTCTTATCTTCCAGCATGATAGGATTTG...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACTCCAATTGAGACACTaGGGTGGGCTTGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSLQLRH*GGLGGE
Trigger: CTCCCCTCCAAGCCCACCCCAGTGTCTCAATTGGAG...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGAATGGTTCTGGGCCTTaGAACAGCATCCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQNGSGP*NSIPPH
Trigger: GTGGGGTGGGATGCTGTTCCAAGGCCCAGAACCATT...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp CTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCAATGTCTGCAGGACCTaGGGACACAGACCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LCSEQAWARQFTVVGDQANVCRT*GHRPFP
Trigger: TGGAAACGGTCTGTGTCCCCAGGTCCTGCAGACATT...GGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR TCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAGCTCAGCAGCAAGGCTaGGTAGTTGTAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGAQQQG*VVVDVW
Trigger: CCAGACATCTACAACTACTCAGCCTTGCTGCTGAGC...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGGCACCCGGATGTAGTTaGGGCACTCTGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKAPGCS*GTLSVL
Trigger: CAAAACAGACAGAGTGCCTCAACTACATCCGGGTGC...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCACCCGGATGTAGTTaGGGCACTCTGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQAPGCS*GTLSVL
Trigger: CAAAACAGACAGAGTGCCTCAACTACATCCGGGTGC...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp CGATCTGTGCTGGCCATGCTAACCCTGTTGGCTATTAGGGGGTGGGGGCACTCTGTTCTCCATCAACCATaGCGGATGTGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RSVLAMLTLLAIRGWGHSVLHQP*RMCSCV
Trigger: CACACAGCTACACATCCGTCATGGTTGATGGAGAAC...AGAGTGCCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGCCAGCACAGATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGGTTCTCCATCAACCATaGCGGATGTGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRVLHQP*RMCSCV
Trigger: CACACAGCTACACATCCGTCATGGTTGATGGAGAAC...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTGTTCTCCATCAACCATaGCGGATGTGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSVLHQP*RMCSCV
Trigger: CACACAGCTACACATCCGTCATGGTTGATGGAGAAC...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCCACAGACACCTCCGTaGAGAAGAAGTAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVPQTPP*RRSRPC
Trigger: ACAGGGTCTACTTCTTCTTCACGGAGGTGTCTGTGG...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp ACCTGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCTGGCCGGGAGCAGATaGGTCGGGCTTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TCTHPAVLVHEQLSKPVSLAGSR*VGLSGR
Trigger: CCTTCCTGAAAGCCCGACTCATCTGCTCCCGGCCAG...GCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCAGTTCACATCTTTCTTaGTTAACCTGGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: HLGSRLLHCPASAHQVVASSHLS*LTWACC
Trigger: ACAACAGGCCCAGGTTAATCAAGAAAGATGTGAACT...GGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCAGTTCACATCTTTCTTaGTTAACCTGGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFSSHLS*LTWACC
Trigger: ACAACAGGCCCAGGTTAATCAAGAAAGATGTGAACT...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAGCTGGGTCTCCTCGATaGTGTGAACAGCGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRAGSPR*CEQRAR
Trigger: TCGAGCACGCTGTTCACATCATCGAGGAGACCCAGC...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCCAGCATCTTCAGGACACCTGTTGTGATGGATCCTGAAGGAATTAGCAGGCGAACTCAGCGCTTTCCCTaGTGGCGTCCTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSIFRTPVVMDPEGISRRTQRFP*WRPAAS
Trigger: GCTGGCTGCAGGACGCCATCAGGGAAAGCGCTGAGT...TCGCCTGCTAATTCCTTCAGGATCCATCACAACAGGTGTCCTGAAGATGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp CTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGTCAGGACACCTGTTGTaGTGGATCCTGAAGGAATTA +
Preference number: 4 (lower is better)
Translates to: LHCPASAHQVVAQWLCSESGHLL*WILKEL
Trigger: TAATTCCTTCAGGATCCATCACAACAGGTGTCCTGA...CTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGTATGTGATGGTTCCGTaGGCAAGACTGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRYVMVP*ARLASL
Trigger: CAAGGATGCCAGTCTTGCTCACGGAACCATCACATA...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTCAGTTTGTAGTGGTTaGAGCCACACCCAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTSVCSG*SHTQSK
Trigger: CTTGCTTTGGGTGTGGCTTCAACCACTACAAACTGA...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTCTGTGCCACCGTGCTTaGAAAAATGCTGCCGGTAAC +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRLCHRA*KNAAGN
Trigger: GTTACCGGCAGCATTTTTTCAAGCACGGTGGCACAG...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTGTGCCACCGTGCTTaGAAAAATGCTGCCGGTAAC +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPLCHRA*KNAAGN
Trigger: GTTACCGGCAGCATTTTTTCAAGCACGGTGGCACAG...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTTCTGTCTGAACAACTaGCAAGGTGGGGGCCACTAC +
Preference number: 4 (lower is better)
Translates to: PGYLPLLKTHLVDVGRSSFCLNN*QGGGHY
Trigger: GTAGTGGCCCCCACCTTGTCAGTTGTTCAGACAGAA...AGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACTACTACCTTCTGTCTaGACAACTGACAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPLLPSV*TTDKVG
Trigger: CCCCACCTTGTCAGTTGTTCAGACAGAAGGTAGTAG...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCACGGTCACAGAAATCTaGCTTGGGCTTCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTTVTEI*LGLLLP
Trigger: GGGAAGAAGAAGCCCAAGTCAGATTTCTGTGACCGT...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGACCAAAGGCGCCCTTGTaGAGGTTCCATCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGPKAPL*RFHLSH
Trigger: GTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGG...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTCAGGAGCCGACGCTaGTCCCTCCATGATTCTATT +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPLRSRR*SLHDSI
Trigger: AATAGAATCATGGAGGGATCAGCGTCGGCTCCTGAG...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp CTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCGGGTATGGGTGCAAATaGCATCGCTGTCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: LCSEQAWARQFTVVGDQAGYGCK*HRCPKH
Trigger: ATGTTTGGGACAGCGATGGCATTTGCACCCATACCC...GGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGGGGTATGGGTGCAAATaGCATCGCTGTCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: LPGGYRVSLLQLSHAFLQGYGCK*HRCPKH
Trigger: ATGTTTGGGACAGCGATGGCATTTGCACCCATACCC...CTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGATCCGGGGTATGGGTaGAAATGCCATCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTDPGYG*KCHRCP
Trigger: GGGACAGCGATGGCATTTGCACCCATACCCCGGATC...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCAAGGTGCACCTCTCTGTaGTCCCAGGTGATCCGGGGT +
Preference number: 4 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEARCTSL*SQVIRG
Trigger: ACCCCGGATCACCTGGGAGCACAGAGAGGTGCACCT...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGCTCGGAGATGTTGAGTaGGTTCACAGCGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVLGDVE*VHSEDR
Trigger: GCGGTCTTCGCTGTGAACGCACTCAACATCTCCGAG...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACTCGGAGATGTTGAGTaGGTTCACAGCGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSLGDVE*VHSEDR
Trigger: GCGGTCTTCGCTGTGAACGCACTCAACATCTCCGAG...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTCTCGGAGATGTTGAGTaGGTTCACAGCGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCLGDVE*VHSEDR
Trigger: GCGGTCTTCGCTGTGAACGCACTCAACATCTCCGAG...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTTTCCAATACACCTCATaGTGCTTCTCGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: GESLGRCRISLQSLLPDRFQYTS*CFSEML
Trigger: CAACATCTCCGAGAAGCAGCATGAGGTGTATTGGAA...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACAGGCCGGCTGGAATaGGTTGGTCCCACACACGTA +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLTGRLE*VGPTHV
Trigger: TACGTGTGTGGGACCAACGCATTCCAGCCGGCCTGT...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGGGATGTGTAGCTGTGTaGTGGGTCAAAGGGACATCT +
Preference number: 4 (lower is better)
Translates to: VRDSFLVATGCPCYSFPTGCVAV*WVKGTS
Trigger: AGATGTCCCTTTGACCCAGCACACAGCTACACATCC...CGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCACGCCCTGGTCCCCCTTaGACACTCTTGCTATCCGTG +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPRPGPP*TLLLSV
Trigger: CACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCG...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGTCCATTTCTTCTaGAAGGTCCTCAGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLEVHFF*KVLRPP
Trigger: GGGCGGCCTGAGGACCTTGCAGAAGAAATGGACCTC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAGGTCCATTTCTTCTaGAAGGTCCTCAGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTEVHFF*KVLRPP
Trigger: GGGCGGCCTGAGGACCTTGCAGAAGAAATGGACCTC...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACTGTGGGGTGAAGAGTaGATAGAACACAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPLWGEE*IEHRHL
Trigger: AAGGTGCCTGTGTTCTATGCACTCTTCACCCCACAG...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGGTTGTAGGCGCACACTaGCGACAGCCCCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLVVGAH*RQPHVV
Trigger: AACAACGTGGGGCTGTCGGCAGTGTGCGCCTACAAC...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTTCCACTGTGGTGCTCTaGATGTACTTCCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCSTVVL*MYFPWE
Trigger: CTCCCACGGGAAGTACATGCAGAGCACCACAGTGGA...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGATCCACTGTGGTGCTCTaGATGTACTTCCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGSTVVL*MYFPWE
Trigger: CTCCCACGGGAAGTACATGCAGAGCACCACAGTGGA...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTACTGCTCCACTGTGGTaGTCTGCATGTACTTCCCGT +
Preference number: 4 (lower is better)
Translates to: PGYLPLLKTHLVDVGRSSTAPLW*SACTSR
Trigger: ACGGGAAGTACATGCAGAGCACCACAGTGGAGCAGT...AGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGACACTTGGTGTGGGACTaGTCCACTGTGGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRHLVWD*STVVLC
Trigger: GCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTG...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTTCACTTGGTGTGGGACTaGTCCACTGTGGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: HASWSSLAKSAGRRSSRLHLVWD*STVVLC
Trigger: GCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTG...AAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCTGGTCTTTAACGAACTaGAGCGTCTTGTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARWSLTN*SVLSGK
Trigger: TTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCA...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp ACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGGCTCTCGGTCTGGTaGAGAGCCACGCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: THPAVLVHEQLSKPVSHPGLSVW*RATQVA
Trigger: AGCGACCTGCGTGGCTCTGCACCAGACCGAGAGCCC...AGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCTGCAGCCAGCTGAGTaGATGGGCCCTGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: CTHPAVLVHEQLSKPVSHLQPAE*MGPAIG
Trigger: CCCGATGGCAGGGCCCATGCACTCAGCTGGCTGCAG...ATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTCTCATCACAGCAACCTaGACCTTCGAAGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPALITAT*TFEVLF
Trigger: GAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAG...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCAGCTACAGGGTGTCCTTaGTACAGCTTTCCCACGCCT +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSATGCP*YSFPTP
Trigger: AGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGC...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp ACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTCCACTGTCCCGCCTCTaGCCATCAGGTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: THPAVLVHEQLSKPVSHPPLSRL*PSGGGP
Trigger: TGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGG...AGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACGCCATCCTGGTTACCTaGTTGTGCCAGACAGAACTT +
Preference number: 4 (lower is better)
Translates to: RISLQSLLPDRRGGTCTHAILVT*LCQTEL
Trigger: AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGC...GTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAAACCTGCACACACCCTaGTGTTTTAGTTCACGAGCA +
Preference number: 4 (lower is better)
Translates to: GSHWDGVGSAFRACCLTVNLHTP*CFSSRA
Trigger: TGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGTT...TACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGTTCTTGTCCCAGTCATaGATCTTGGAGTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKFLSQS*ILEFLG
Trigger: GCCAAGGAACTCCAAGATGCATGACTGGGACAAGAA...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGACCTATTTGGCTTTCTaGATCAAGTTTGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLTYLAF*IKFGVL
Trigger: CAGGACACCAAACTTGATGCAGAAAGCCAAATAGGT...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGGCACCAGGAGATTTaGATAATTGACCTATTTGGC +
Preference number: 4 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLWHQEI*IIDLFG
Trigger: GCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCA...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AAGAGGACTGAGGTTGTCTGCACGATGCGGGCTAACCTACGCAGCACTGCACGATTCACTTCCAGGACGTaGTTGGCGACCACTTGGAAG +
Preference number: 4 (lower is better)
Translates to: KRTEVVCTMRANLRSTARFTSRT*LATTWK
Trigger: CTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGTGAA...TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTTGGTTCGCAGGATGTaGCGGTGGGCGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVLVRRM*RWAQAW
Trigger: CCAAGCCTGCGCCCACCGGCACATCCTGCGAACCAA...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTAGGACTGAGGTTGTCTaGACGATGCGGGCTAACCTA +
Preference number: 4 (lower is better)
Translates to: PGYLPLLKTHLVDVGRSSRTEVV*TMRANL
Trigger: TAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCT...AGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCGGAAGAAAAGGTTCGTaGCAATCTGGACAACAGGCG +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLGRKGS*QSGQQA
Trigger: CGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCC...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTATCTCTCCAAAAACAATaGTTCCCTCAAGGAATAAAG +
Preference number: 4 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVSLQKQ*FPQGIK
Trigger: CTTTATTCCTTGAGGGAAGCATTGTTTTTGGAGAGA...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGACAGGCTACCTTCCCTTaGTCAAAACCCACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGQATFP*SKPTSW
Trigger: CCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTG...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCGGTCAAATCCTATCATaGTGGAAGATAAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAGQILS*WKIRLS
Trigger: GGACAGTCTTATCTTCCAGCATGATAGGATTTGACC...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAAAACCAGAGCCACGTaGAGGACTGCAGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGKTRAT*RTADAQ
Trigger: CTGAGCGTCTGCAGTCCTGCACGTGGCTCTGGTTTT...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAGTAGTTGTAGATGTCTaGCTCATGAAACTGCACCAG +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGVVVDV*LMKLHQ
Trigger: CTGGTGCAGTTTCATGAGCCAGACATCTACAACTAC...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAAGTAGTTGTAGATGTCTaGCTCATGAAACTGCACCAG +
Preference number: 4 (lower is better)
Translates to: LGSRLLHCPASAHQVVAQVVVDV*LMKLHQ
Trigger: CTGGTGCAGTTTCATGAGCCAGACATCTACAACTAC...TTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCGATGTTAAGTTCAGGTaGTCACAGGCCGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTDVKFR*SQAGWN
Trigger: ATTCCAGCCGGCCTGTGACCACCTGAACTTAACATC...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAAGATGTTAAGTTCAGGTaGTCACAGGCCGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: WDGVGSAFRACCLTVEEEDVKFR*SQAGWN
Trigger: ATTCCAGCCGGCCTGTGACCACCTGAACTTAACATC...TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCTGTGTAGCTGTGTGCTaGGTCAAAGGGACATCTTCC +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLCVAVC*VKGTSS
Trigger: GGAAGATGTCCCTTTGACCCAGCACACAGCTACACA...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGTGTGTAGCTGTGTGCTaGGTCAAAGGGACATCTTCC +
Preference number: 4 (lower is better)
Translates to: VRDSFLVATGCPCYSFPTCVAVC*VKGTSS
Trigger: GGAAGATGTCCCTTTGACCCAGCACACAGCTACACA...CGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCGTCCTCAGAGGACTGTaGGAAGAATTTCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCVLRGL*EEFREM
Trigger: CATCTCCCGAAATTCTTCCCACAGTCCTCTGAGGAC...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGCCGTCGGGGCTGTCTaGGCTTTTTCGGATCACGTC +
Preference number: 4 (lower is better)
Translates to: TSSYQSLLAILVTCLCQTAVGAV*AFSDHV
Trigger: GACGTGATCCGAAAAAGCCCAGACAGCCCCGACGGC...TGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTCACTCTTGCTATCCGTaGGATCAGCACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRHSCYP*DQHPEH
Trigger: GTGTTCAGGGTGCTGATCCCACGGATAGCAAGAGTG...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACACTCTTGCTATCCGTaGGATCAGCACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPHSCYP*DQHPEH
Trigger: GTGTTCAGGGTGCTGATCCCACGGATAGCAAGAGTG...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGACACTCTTGCTATCCGTaGGATCAGCACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGHSCYP*DQHPEH
Trigger: GTGTTCAGGGTGCTGATCCCACGGATAGCAAGAGTG...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGTGCATGTACTTCCCGTaGGAGAAGACCTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVCMYFP*EKTSSA
Trigger: AGCCGAGGAGGTCTTCTCCCACGGGAAGTACATGCA...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGGACTGCTCCACTGTaGTGCTCTGCATGTACTTCC +
Preference number: 4 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPGTAPL*CSACTS
Trigger: GGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCC...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCACGCACCCACTTGGTGTaGGACTGCTCCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPRTHLV*DCSTVV
Trigger: CACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCG...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGTATAGCGCACCCACTTaGTGTGGGACTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVYSAPT*CGTAPL
Trigger: CAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATA...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCCTCCAGGCCGCGGCTTaGGTACCGGGCCATTATAGC +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVLQAAA*VPGHYS
Trigger: GCTATAATGGCCCGGTACCCAAGCCGCGGCCTGGAG...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTAGGAGCTGGTGTAGTTaGCGGCCCGTGCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: HPAVLVHEQLSKPVSHPGRSWCS*RPVPRC
Trigger: ACAGCGAGGCACGGGCCGCCAACTACACCAGCTCCT...ACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGCAAATTCAAGGAGCTaGTGTAGTTGGCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPANSRS*CSWRPV
Trigger: CACGGGCCGCCAACTACACCAGCTCCTTGAATTTGC...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGACTGCAGCGTCTTGTCTaGCAAATTCAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ESLGRCRISLQSLLPDRRLQRLV*QIQGAG
Trigger: ACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAG...TCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCCTGCAGCGTCTTGTCTaGCAAATTCAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLLQRLV*QIQGAG
Trigger: ACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAG...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAGCAAGACTGGCATCCTTGGCTGGATGGGCAAGCACACACCTCACAGGCAGCTGGGCCTGTTGTCTATTaGGGTTACCGAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: EQDWHPWLDGQAHTSQAAGPVVY*GYRVIH
Trigger: ATGGATGACTCGGTAACCCCAATAGACAACAGGCCC...AGCTGCCTGTGAGGTGTGTGCTTGCCCATCCAGCCAAGGATGCCAGTCTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTGGGCCTGTTGTCTATTaGGGTTACCGAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSGPVVY*GYRVIH
Trigger: ATGGATGACTCGGTAACCCCAATAGACAACAGGCCC...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGCAGGGTCTGGACTaGCTCAAAGTCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSQQGLD*LKVLEE
Trigger: CTCTTCCAGGACTTTGAGCCAGTCCAGACCCTGCTG...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACGACAGCAGCAGGGTCTaGACTGGCTCAAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HEQLSKPVSHPGYLLVPDDSSRV*TGSKSW
Trigger: CCAGGACTTTGAGCCAGTCCAGACCCTGCTGCTGTC...GTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGACAGCAGCAGGGTCTaGACTGGCTCAAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLDSSRV*TGSKSW
Trigger: CCAGGACTTTGAGCCAGTCCAGACCCTGCTGCTGTC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTAAGGCCAGCGGGGCCTaGACCACGCCCGAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELKASGA*TTPELE
Trigger: CTCTAACTCGGGCGTGGTCCAGGCCCCGCTGGCCTT...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACACTCCTGTCCCCCACATaGCCCAGACAGGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: TSSYQSLLAILVTCLCQTLLSPT*PRQDRE
Trigger: TTCCCTGTCCTGTCTGGGCCATGTGGGGGACAGGAG...TGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTTGGGACTCCTTCCTGGTaGCTACAGGGTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: HASWSSLAKSAGRRSSRLGTPSW*LQGVLA
Trigger: AGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCC...AAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGTTCAGAGCAGGCTTaGGCAAGACAGTTCACAGTT +
Preference number: 4 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTCSEQA*ARQFTV
Trigger: AACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACA...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCATGTCACAGGCCCACTTaGGTTCCAGGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSCHRPT*VPGFST
Trigger: AGTGGAGAAGCCTGGAACCCAAGTGGGCCTGTGACA...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACGTCAAGGGGAGTCACTaGGACGGTGTAGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: HEQLSKPVSHPGYLLVPDVKGSH*DGVGSA
Trigger: GGCTGATCCTACACCGTCCCAGTGACTCCCCTTGAC...GTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCATTCCGTGAGCAAGACTaGCATCCTTGGCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSFREQD*HPWLDG
Trigger: CCCATCCAGCCAAGGATGCCAGTCTTGCTCACGGAA...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAAGACCCGGGCCAGGTTaGATTTTTGGGAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPRPGPG*IFGSIS
Trigger: TGAAATGCTCCCAAAAATCCAACCTGGCCCGGGTCT...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCTGCTTGGCGACCACTTaGAAGACCGTTTTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARCLATT*KTVLFL
Trigger: TAAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCA...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGCTTCCAGGACGTGCTTaGCGACCACTTGGAAGACCG +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLLPGRA*RPLGRP
Trigger: CGGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAG...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGAGAAGACCCTTGGGTaGATGCCACCAACACTTTGG +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPEKTLG*MPPTLW
Trigger: CCAAAGTGTTGGTGGCATCCACCCAAGGGTCTTCTC...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCGCCGGTGTCCAGGGCTaGCTTGGGGTGCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVAGVQG*LGVLPI
Trigger: AATGGGGAGCACCCCAAGCCAGCCCTGGACACCGGC...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCATCAAAACCCACCTCGTaGATGTGGGAAGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPSKPTS*MWEGPL
Trigger: AAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGA...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTTACAGAATGGTTCTaGGCCTTGGAACAGCATCCC +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCLTEWF*ALEQHP
Trigger: GGGATGCTGTTCCAAGGCCCAGAACCATTCTGTAAG...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp TGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCGGGAGCCTTGGCCTTaGCCCGTCCTGTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: CTHPAVLVHEQLSKPVSHREPWP*PVLWTS
Trigger: GGAAGTCCACAGGACGGGCCAAGGCCAAGGCTCCCG...ATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGATCTTCCTTTATTTTTaGATGGCTGGTTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPIFLYF*MAGFQP
Trigger: TGGCTGAAAACCAGCCATCCAAAAATAAAGGAAGAT...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR TCA 90 bp GGGCCTCTCGACTTGGGGTGCGGAGGGGGAACGTGTGGAGACAACCAGGGTGTCGTATCTTATGCCTCTTaGAACTTTCCAGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: GPLDLGCGGGTCGDNQGVVSYAS*NFPVIS
Trigger: AGAAATGACTGGAAAGTTTCAAGAGGCATAAGATAC...GACACCCTGGTTGTCTCCACACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp CTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCATGTCAAAGCCCACTTaGTACTTCTTCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LCSEQAWARQFTVVGDQAMSKPT*YFFRAS
Trigger: TGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACAT...GGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp TGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATTCCCAGTTCTCCAGGTaGGGAGGGGTCGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: CTHPAVLVHEQLSKPVSHSQFSR*GGVALT
Trigger: GGTGAGAGCGACCCCTCCTCACCTGGAGAACTGGGA...ATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAACAGCGCGGTCCCTaGGAATCCACATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTEQRGP*ESTFPS
Trigger: ACTGGGAAATGTGGATTCTCAGGGACCGCGCTGTTC...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGGAACAGCGCGGTCCCTaGGAATCCACATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLEQRGP*ESTFPS
Trigger: ACTGGGAAATGTGGATTCTCAGGGACCGCGCTGTTC...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCACAGCCTGGAGCTCGTaGACAGCGCGGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVTAWSS*TARSLR
Trigger: TCTCAGGGACCGCGCTGTTCACGAGCTCCAGGCTGT...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCCAGCATCTTCAGGACACCTGTTGTGATGGATCCTGAAGGAATTAGCAGGCGACTCTGTGCTCCCAGGTaGTCCGGGGTATGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: SSIFRTPVVMDPEGISRRLCAPR*SGVWVQ
Trigger: TTGCACCCATACCCCGGATCACCTGGGAGCACAGAG...TCGCCTGCTAATTCCTTCAGGATCCATCACAACAGGTGTCCTGAAGATGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGCACCCGGATGTAGTTaGGGCACTCTGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCAPGCS*GTLSVL
Trigger: CAAAACAGACAGAGTGCCTCAACTACATCCGGGTGC...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGTTCTCCATCAACCATaGCGGATGTGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQVLHQP*RMCSCV
Trigger: CACACAGCTACACATCCGTCATGGTTGATGGAGAAC...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp AAGAGGACTGAGGTTGTCTGCACGATGCGGGCTAACCTACGCAGCACTGCACGAGTTCTCCATCAACCATaGCGGATGTGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: KRTEVVCTMRANLRSTARVLHQP*RMCSCV
Trigger: CACACAGCTACACATCCGTCATGGTTGATGGAGAAC...TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTACCTGGCCGGGAGCAGATaGGTCGGGCTTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSKPVSHPGYLLVPDRTYLAGSR*VGLSGR
Trigger: CCTTCCTGAAAGCCCGACTCATCTGCTCCCGGCCAG...GTAAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GACTATGGCTGGTTTTACAATACAACAGCAGAGCTTAGTGGCTGTGACACAGCCCTGGCCGGGAGCAGATaGGTCGGGCTTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: DYGWFYNTTAELSGCDTALAGSR*VGLSGR
Trigger: CCTTCCTGAAAGCCCGACTCATCTGCTCCCGGCCAG...GGCTGTGTCACAGCCACTAAGCTCTGCTGTTGTATTGTAAAACCAGCCATAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR TCA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGAGTTCACATCTTTCTTaGTTAACCTGGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRSSHLS*LTWACC
Trigger: ACAACAGGCCCAGGTTAATCAAGAAAGATGTGAACT...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGCTGGGTCTCCTCGATaGTGTGAACAGCGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPAGSPR*CEQRAR
Trigger: TCGAGCACGCTGTTCACATCATCGAGGAGACCCAGC...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp TTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGTCGCCGCTCATCTCCTaGATCAAACCCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FSCPSHASWSSLAKSAGRSPLIS*IKPLLG
Trigger: CCCCAGCAGGGGTTTGATTCAGGAGATGAGCGGCGA...CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCTAGGATCCGTCCTGCAGCCAGCTaGGTGCATGGGCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: AKQVIVTLLGRHSVFARIRPAAS*VHGPCH
Trigger: ATGGCAGGGCCCATGCACTCAGCTGGCTGCAGGACG...GATCCTAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp TTCCTGTCACAGGCCCACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCGAGAAGCAGCAGGCTTaGTTTGCATCAATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: FLSQAHLGSRLLHCPASAEKQQA*FASIKA
Trigger: TGCTTTTATTGATGCAAATCAAGCCTGCTGCTTCTC...GGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTGGGCCTGTGACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGAGAAGCAGCAGGCTTaGTTTGCATCAATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQEKQQA*FASIKA
Trigger: TGCTTTTATTGATGCAAATCAAGCCTGCTGCTTCTC...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GAGCAAGACTGGCATCCTTGGCTGGATGGGCAAGCACACACCTCACAGGCAGCTCAGGTTATGAGTATGTaGTGGTTCCGTGAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: EQDWHPWLDGQAHTSQAAQVMSM*WFREQD
Trigger: GTCTTGCTCACGGAACCATCACATACTCATAACCTG...AGCTGCCTGTGAGGTGTGTGCTTGCCCATCCAGCCAAGGATGCCAGTCTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTCTACTACCTTCTGTCTaGACAACTGACAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRLLPSV*TTDKVG
Trigger: CCCCACCTTGTCAGTTGTTCAGACAGAAGGTAGTAG...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTTGGGGACTTTGCTGGTaGTGGTGTCTTGCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLWGLCW*WCLARS
Trigger: AGACCGAGCAAGACACCATCACCAGCAAAGTCCCCA...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGATGGGGACTTTGCTGGTaGTGGTGTCTTGCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRWGLCW*WCLARS
Trigger: AGACCGAGCAAGACACCATCACCAGCAAAGTCCCCA...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAACTTCAGCTCACACTTaGCGTCAAAGGGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGTSAHT*RQRACP
Trigger: GGGACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGT...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGTCTCCATCTGCGTCTaGGTCAGCGAACTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTVSICV*VSELQL
Trigger: GAGCTGAAGTTCGCTGACTCAGACGCAGATGGAGAC...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCTTCAAGTACTCCGACTaGCTTCGGAACACAAGACTG +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLFKYSD*LRNTRL
Trigger: CAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAA...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTACGGGCAGGTGTGCTATTaGAGATGCGGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: LSKPVSHPGYLLVPDRTYGQVCY*RCGSAP
Trigger: GGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCC...GTAAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCGGGCAGGTGTGCTATTaGAGATGCGGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVGQVCY*RCGSAP
Trigger: GGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCC...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAGTGGCCGGGCAGGTGTaGTATTGCAGATGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKVAGQV*YCRCGS
Trigger: TGAGCCGCATCTGCAATAGCACACCTGCCCGGCCAC...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGGGTATGGGTGCAAATaGCATCGCTGTCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPGYGCK*HRCPKH
Trigger: ATGTTTGGGACAGCGATGGCATTTGCACCCATACCC...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTGGGTATGGGTGCAAATaGCATCGCTGTCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVGYGCK*HRCPKH
Trigger: ATGTTTGGGACAGCGATGGCATTTGCACCCATACCC...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp TTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGGTGCACCTCTCTGTaGTCCCAGGTGATCCGGGGT +
Preference number: 4 (lower is better)
Translates to: FSCPSHASWSSLAKSAGRRCTSL*SQVIRG
Trigger: ACCCCGGATCACCTGGGAGCACAGAGAGGTGCACCT...CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAAGGTGCACCTCTCTGTaGTCCCAGGTGATCCGGGGT +
Preference number: 4 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKRCTSL*SQVIRG
Trigger: ACCCCGGATCACCTGGGAGCACAGAGAGGTGCACCT...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCAATACACCTCATGCTaGTTCTCGGAGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: GALCQGESLGRCRISLQSQYTSC*FSEMLS
Trigger: ACTCAACATCTCCGAGAAGCAGCATGAGGTGTATTG...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGGGATGTGTAGCTGTGTaGTGGGTCAAAGGGACATCT +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKGCVAV*WVKGTS
Trigger: AGATGTCCCTTTGACCCAGCACACAGCTACACATCC...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGGGATGTGTAGCTGTGTaGTGGGTCAAAGGGACATCT +
Preference number: 4 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQGCVAV*WVKGTS
Trigger: AGATGTCCCTTTGACCCAGCACACAGCTACACATCC...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTGTTCAGCCAAGGGATTaGATATTCTGTCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSVQPRD*IFCPQR
Trigger: CCTCTGAGGACAGAATATGCAATCCCTTGGCTGAAC...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCCCCCTTGCACACTCTTaGTATCCGTGGGATCAGCAC +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTPLAHS*YPWDQH
Trigger: GTGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGG...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGCGCCCTGGTCCCCCTTaGACACTCTTGCTATCCGTG +
Preference number: 4 (lower is better)
Translates to: FSCPSHASWSSLAKSAGRRPGPP*TLLLSV
Trigger: CACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCG...CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTCTGTGGGGTGAAGAGTaGATAGAACACAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPLWGEE*IEHRHL
Trigger: AAGGTGCCTGTGTTCTATGCACTCTTCACCCCACAG...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCAACTGCTCCACTGTGGTaGTCTGCATGTACTTCCCGT +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSTAPLW*SACTSR
Trigger: ACGGGAAGTACATGCAGAGCACCACAGTGGAGCAGT...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTTCCTCGCAGGTGCCGTaGTTCCCACAGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELSSQVP*FPQKAS
Trigger: GCTGGCCTTCTGTGGGAAGCACGGCACCTGCGAGGA...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATTCCTCGCAGGTGCCGTaGTTCCCACAGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CTHPAVLVHEQLSKPVSHSSQVP*FPQKAS
Trigger: GCTGGCCTTCTGTGGGAAGCACGGCACCTGCGAGGA...ATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCCACAGTCCTCGCAGGTaGCGTGCTTCCCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVHSPRR*RASHRR
Trigger: CCTTCTGTGGGAAGCACGGCACCTGCGAGGACTGTG...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTGGCAGTGCATGGGTCTaGACAGGGACACAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HPAVLVHEQLSKPVSHPGGSAWV*TGTQVS
Trigger: GGAGACCTGTGTCCCTGTGCAGACCCATGCACTGCC...ACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGTCCCTGATGGCGTCCTaGAGCCAGCTGAGTGCATGG +
Preference number: 4 (lower is better)
Translates to: FSCPSHASWSSLAKSAGRSLMAS*SQLSAW
Trigger: CCATGCACTCAGCTGGCTGCAGGACGCCATCAGGGA...CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACTGCATCATCCGGTCGTaGTCCCCAGCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYCIIRS*SPATAL
Trigger: GAGGGCTGTGGCTGGGGAGCACGACCGGATGATGCA...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGGCCTTCCTCCAGCTCTaGATCATCCGGTCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: FSCPSHASWSSLAKSAGRAFLQL*IIRSCS
Trigger: GGAGCACGACCGGATGATGCAGAGCTGGAGGAAGGC...CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCAACCTGCACACACCCTaGTGTTTTAGTTCACGAGCA +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCNLHTP*CFSSRA
Trigger: TGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGTT...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGAAACCTGCACACACCCTaGTGTTTTAGTTCACGAGCA +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARNLHTP*CFSSRA
Trigger: TGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGTT...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAAGACCCTTGGGTGGATaGCACCAACACTTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRRPLGG*HQHFGG
Trigger: GCCACCAAAGTGTTGGTGGCATCCACCCAAGGGTCT...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTAGGAACAGCGCCGTATaGTTGAGGGTGCTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLRNSAV*LRVLWS
Trigger: TGACCACAGCACCCTCAAGCATACGGCGCTGTTCCT...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAGGTCAAATCCTATCATaGTGGAAGATAAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGGQILS*WKIRLS
Trigger: GGACAGTCTTATCTTCCAGCATGATAGGATTTGACC...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGGACATTGGCCACTTCTaGCGCAAACCTCTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRDIGHF*RKPLLF
Trigger: AAACAACAGAGGTTTGCGGCAGAAGTGGCCAATGTC...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR GCA 90 bp CCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCGACAAAGCGAATGTCTaGAGGACCTTCTTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: PGGYRVSLLQLSHAFLQLDKANV*RTFFED
Trigger: GTCTTCAAAGAAGGTCCTGCAGACATTCGCTTTGTC...GAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTTGGCTGTCACTCCTTTaGAGTGTGGGAGATCAGTCT +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRWLSLL*SVGDQS
Trigger: AGACTGATCTCCCACACTGCAAAGGAGTGACAGCCA...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp CACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTGGAAGTGGCGCTGAGTaGCTGCAGCACCCGGATGTA +
Preference number: 4 (lower is better)
Translates to: HPAVLVHEQLSKPVSHPGGSGAE*LQHPDV
Trigger: TACATCCGGGTGCTGCAGCCACTCAGCGCCACTTCC...ACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCGGAAGTGGCGCTGAGTaGCTGCAGCACCCGGATGTA +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVGSGAE*LQHPDV
Trigger: TACATCCGGGTGCTGCAGCCACTCAGCGCCACTTCC...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCCCGGCTGGAATGCGTTaGTCCCACACACGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCPAGMR*SHTRKG
Trigger: CCCTTTACGTGTGTGGGACCAACGCATTCCAGCCGG...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTGATGTTAAGTTCAGGTaGTCACAGGCCGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPDVKFR*SQAGWN
Trigger: ATTCCAGCCGGCCTGTGACCACCTGAACTTAACATC...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGTGTGTAGCTGTGTGCTaGGTCAAAGGGACATCTTCC +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGCVAVC*VKGTSS
Trigger: GGAAGATGTCCCTTTGACCCAGCACACAGCTACACA...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGATGTGTAGCTGTGTGCTaGGTCAAAGGGACATCTTCC +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGCVAVC*VKGTSS
Trigger: GGAAGATGTCCCTTTGACCCAGCACACAGCTACACA...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTGTCCTCAGAGGACTGTaGGAAGAATTTCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVVLRGL*EEFREM
Trigger: CATCTCCCGAAATTCTTCCCACAGTCCTCTGAGGAC...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGCACTCTTGCTATCCGTaGGATCAGCACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVHSCYP*DQHPEH
Trigger: GTGTTCAGGGTGCTGATCCCACGGATAGCAAGAGTG...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTACGTCCTCAGGCCGCCCTaGTCCCCCTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: LSKPVSHPGYLLVPDRTYVLRPP*SPLHTL
Trigger: AAGAGTGTGCAAGGGGGACCAGGGCGGCCTGAGGAC...GTAAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGGGACTGCTCCACTGTaGTGCTCTGCATGTACTTCC +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLGTAPL*CSACTS
Trigger: GGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGGGGACTGCTCCACTGTaGTGCTCTGCATGTACTTCC +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLGTAPL*CSACTS
Trigger: GGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCC...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCAGGAGCTGGTGTAGTTaGCGGCCCGTGCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVRSWCS*RPVPRC
Trigger: ACAGCGAGGCACGGGCCGCCAACTACACCAGCTCCT...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGGCAAATTCAAGGAGCTaGTGTAGTTGGCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLANSRS*CSWRPV
Trigger: CACGGGCCGCCAACTACACCAGCTCCTTGAATTTGC...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGCAAATTCAAGGAGCTaGTGTAGTTGGCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLANSRS*CSWRPV
Trigger: CACGGGCCGCCAACTACACCAGCTCCTTGAATTTGC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AAGAGGACTGAGGTTGTCTGCACGATGCGGGCTAACCTACGCAGCACTGCACGACTGCAGCGTCTTGTCTaGCAAATTCAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KRTEVVCTMRANLRSTARLQRLV*QIQGAG
Trigger: ACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAG...TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGCTGCAGCGTCTTGTCTaGCAAATTCAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGLQRLV*QIQGAG
Trigger: ACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAG...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTTCATCCATCAAAGGGTaGTCTTTAACGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPASSIKG*SLTNCS
Trigger: GCTGCAGTTCGTTAAAGACCACCCTTTGATGGATGA...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAGGGCCTGTTGTCTATTaGGGTTACCGAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGGPVVY*GYRVIH
Trigger: ATGGATGACTCGGTAACCCCAATAGACAACAGGCCC...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AAGAGGACTGAGGTTGTCTGCACGATGCGGGCTAACCTACGCAGCACTGCACGAGGGCCTGTTGTCTATTaGGGTTACCGAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: KRTEVVCTMRANLRSTARGPVVY*GYRVIH
Trigger: ATGGATGACTCGGTAACCCCAATAGACAACAGGCCC...TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTGGGCCTGTTGTCTATTaGGGTTACCGAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: PGYLPLLKTHLVDVGRSSGPVVY*GYRVIH
Trigger: ATGGATGACTCGGTAACCCCAATAGACAACAGGCCC...AGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGCAGCAGGGTCTGGACTaGCTCAAAGTCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLQQGLD*LKVLEE
Trigger: CTCTTCCAGGACTTTGAGCCAGTCCAGACCCTGCTG...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTTCAGCAGGGTCTGGACTaGCTCAAAGTCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: HASWSSLAKSAGRRSSRLQQGLD*LKVLEE
Trigger: CTCTTCCAGGACTTTGAGCCAGTCCAGACCCTGCTG...AAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTTGGCCACGCAGGTCGCTGTaGGCGGGCTCCAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: WHQEICIIDLFGFLHQVWPRRSL*AGSRRS
Trigger: ACTGCGCCTGGAGCCCGCCCACAGCGACCTGCGTGG...CCAAACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAACTCCTGTCCCCCACATaGCCCAGACAGGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKLLSPT*PRQDRE
Trigger: TTCCCTGTCCTGTCTGGGCCATGTGGGGGACAGGAG...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCTGTTCAGAGCAGGCTTaGGCAAGACAGTTCACAGTT +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCCSEQA*ARQFTV
Trigger: AACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACA...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCTGTTCAGAGCAGGCTTaGGCAAGACAGTTCACAGTT +
Preference number: 4 (lower is better)
Translates to: AVFRAGLGKTVHSCGGPGCSEQA*ARQFTV
Trigger: AACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACA...GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp ACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACACAGGTGGTGGCCCAATaGCTGTGTTCAGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TSSYQSLLAILVTCLCQTQVVAQ*LCSEQA
Trigger: AGCCTGCTCTGAACACAGCCATTGGGCCACCACCTG...TGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCACAGGTGGTGGCCCAATaGCTGTGTTCAGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPQVVAQ*LCSEQA
Trigger: AGCCTGCTCTGAACACAGCCATTGGGCCACCACCTG...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCACCTCTGCCCATCAGGTaGTGGCCCAATGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEAPLPIR*WPNGCV
Trigger: AACACAGCCATTGGGCCACCACCTGATGGGCAGAGG...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCCCAGTCATGCATCTTaGAGTTCCTTGGCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCPSHAS*SSLAKS
Trigger: AGACTTAGCCAAGGAACTCCAAGATGCATGACTGGG...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATTTTCTGCATCAAGTTTaGTGTCCTGTTGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: WVPGFSTVPPLPIRWWPNFLHQV*CPVAEA
Trigger: AGCTTCTGCAACAGGACACCAAACTTGATGCAGAAA...ATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATTTCTGCATCAAGTTTaGTGTCCTGTTGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LGSRLLHCPASAHQVVAQFLHQV*CPVAEA
Trigger: AGCTTCTGCAACAGGACACCAAACTTGATGCAGAAA...TTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AAGAGGACTGAGGTTGTCTGCACGATGCGGGCTAACCTACGCAGCACTGCACGAAGACCCGGGCCAGGTTaGATTTTTGGGAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: KRTEVVCTMRANLRSTARRPGPG*IFGSIS
Trigger: TGAAATGCTCCCAAAAATCCAACCTGGCCCGGGTCT...TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCTCCTCTGACAGGCACTaGTACACCCCACTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTSSDRH*YTPLSP
Trigger: AGGAGACAGTGGGGTGTACCAGTGCCTGTCAGAGGA...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGAACAACTGACAAGGTaGGGGCCACTACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLEQLTR*GPLRAL
Trigger: CAAAGCCCGTAGTGGCCCCCACCTTGTCAGTTGTTC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGGTTGATGACGATCTTTaGTTCGCAGGATGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKVDDDL*FAGCAG
Trigger: ACCGGCACATCCTGCGAACCAAAGATCGTCATCAAC...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCAAAACCCACCTCGTaGATGTGGGAAGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PGYLPLLKTHLVDVGRSSSKPTS*MWEGPL
Trigger: AAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGA...AGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGATGTTTACACCAAAATaGTCAAATCCTATCATGCTG +
Preference number: 4 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPMFTPK*SNPIML
Trigger: CAGCATGATAGGATTTGACCATTTTGGTGTAAACAT...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCAACACTGGGGTGGGCTTaGAGGGGAGTAGATGCCACA +
Preference number: 4 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEATLGWA*RGVDAT
Trigger: TGTGGCATCTACTCCCCTCCAAGCCCACCCCAGTGT...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR TCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCAATGTCAAAGCCCACTTaGTACTTCTTCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPMSKPT*YFFRAS
Trigger: TGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACAT...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTATGTCAAAGCCCACTTaGTACTTCTTCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVMSKPT*YFFRAS
Trigger: TGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACAT...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAATCCCAGTTCTCCAGGTaGGGAGGGGTCGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKSQFSR*GGVALT
Trigger: GGTGAGAGCGACCCCTCCTCACCTGGAGAACTGGGA...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGAACAGCGCGGTCCCTaGGAATCCACATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPEQRGP*ESTFPS
Trigger: ACTGGGAAATGTGGATTCTCAGGGACCGCGCTGTTC...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTCTGTGCTCCCAGGTaGTCCGGGGTATGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYLCAPR*SGVWVQ
Trigger: TTGCACCCATACCCCGGATCACCTGGGAGCACAGAG...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCTTCTCGGAGATGTTaGGTGCGTTCACAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: VPVMHLGVPWLSLQGGEAASRRC*VRSQRR
Trigger: TCTTCGCTGTGAACGCACTCAACATCTCCGAGAAGC...TGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGCTTCTCGGAGATGTTaGGTGCGTTCACAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLASRRC*VRSQRR
Trigger: TCTTCGCTGTGAACGCACTCAACATCTCCGAGAAGC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTCTGGCCGGGAGCAGATaGGTCGGGCTTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSLAGSR*VGLSGR
Trigger: CCTTCCTGAAAGCCCGACTCATCTGCTCCCGGCCAG...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGTCAGGCCCGGGGACCTaGGCACGAAGACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKSGPGT*ARRHPA
Trigger: TGCGGGATGTCTTCGTGCTCAGGTCCCCGGGCCTGA...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCAGTTCACATCTTTCTTaGTTAACCTGGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RCRISLQSLLPDRRGGTCSSHLS*LTWACC
Trigger: ACAACAGGCCCAGGTTAATCAAGAAAGATGTGAACT...GCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGAGTTCACATCTTTCTTaGTTAACCTGGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKSSHLS*LTWACC
Trigger: ACAACAGGCCCAGGTTAATCAAGAAAGATGTGAACT...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp TGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCAGCGTGCTCGAGGCTaGTGGCTTTGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: CTHPAVLVHEQLSKPVSHQRARG*WLCAEL
Trigger: GAGCTCTGCACAAAGCCATCAGCCTCGAGCACGCTG...ATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp TCCAGCATCTTCAGGACACCTGTTGTGATGGATCCTGAAGGAATTAGCAGGCGAGTCTCCTCGATGATGTaGACAGCGTGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSIFRTPVVMDPEGISRRVSSMM*TACSRL
Trigger: CAGCCTCGAGCACGCTGTTCACATCATCGAGGAGAC...TCGCCTGCTAATTCCTTCAGGATCCATCACAACAGGTGTCCTGAAGATGCTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp ACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGGTCTTGTTGGGGTTaGGGTCGGTGTCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: THPAVLVHEQLSKPVSHPGSCWG*GRCQGL
Trigger: GAGTCCCTGACACCGACCTCAACCCCAACAAGACCC...AGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCGAGAAGCAGCAGGCTTaGTTTGCATCAATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: GALCQGESLGRCRISLQSEKQQA*FASIKA
Trigger: TGCTTTTATTGATGCAAATCAAGCCTGCTGCTTCTC...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCAGAAGCTGAGCATTaGCGGGACAGAGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: VPVMHLGVPWLSLQGGEAAEAEH*RDRGIN
Trigger: GTTTATGCCTCTGTCCCGTCAATGCTCAGCTTCTGC...TGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTGGAGATTTGCATAATTaGCCTATTTGGCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GESLGRCRISLQSLLPDRGDLHN*PIWLSA
Trigger: TGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCC...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAGGAGATTTGCATAATTaGCCTATTTGGCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: ASAHQVVAQWLCSEQAWAGDLHN*PIWLSA
Trigger: TGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCC...TGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGATCAGGACACCTGTTGTaGTGGATCCTGAAGGAATTA +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARSGHLL*WILKEL
Trigger: TAATTCCTTCAGGATCCATCACAACAGGTGTCCTGA...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTCTGTGCCACCGTGCTTaGAAAAATGCTGCCGGTAAC +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLLCHRA*KNAAGN
Trigger: GTTACCGGCAGCATTTTTTCAAGCACGGTGGCACAG...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCACCCACTGTCTCCTTCTaGCAAGTTGAAGATGAGCAA +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPPTVSF*QVEDEQ
Trigger: TTGCTCATCTTCAACTTGTCAGAAGGAGACAGTGGG...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTCCCACTGTCTCCTTCTaGCAAGTTGAAGATGAGCAA +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRPTVSF*QVEDEQ
Trigger: TTGCTCATCTTCAACTTGTCAGAAGGAGACAGTGGG...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTCCAGAGTGGGGACCATaGGGGCCTGTCTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: HPAVLVHEQLSKPVSHPGPEWGP*GPVSPI
Trigger: AATTGGAGAGACAGGCCCTCATGGTCCCCACTCTGG...ACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR TCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTCACACACATGTCCTGTaGCCACATGGACAGAGACAT +
Preference number: 4 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCHTHVL*PHGQRH
Trigger: ATGTCTCTGTCCATGTGGTCACAGGACATGTGTGTG...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR TCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAGGGATGGACCCACAATaGAAGCGTGAAACGGCTCAA +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRGMDPQ*KRETAQ
Trigger: TTGAGCCGTTTCACGCTTTCATTGTGGGTCCATCCC...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAGGGCAGGTGTGCTATTaGAGATGCGGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKGQVCY*RCGSAP
Trigger: GGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCC...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAGGGTATGGGTGCAAATaGCATCGCTGTCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGGYGCK*HRCPKH
Trigger: ATGTTTGGGACAGCGATGGCATTTGCACCCATACCC...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCAATACACCTCATGCTaGTTCTCGGAGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: LPGGYRVSLLQLSHAFLQQYTSC*FSEMLS
Trigger: ACTCAACATCTCCGAGAAGCAGCATGAGGTGTATTG...CTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCATTCCAATACACCTCATaGTGCTTCTCGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPFQYTS*CFSEML
Trigger: CAACATCTCCGAGAAGCAGCATGAGGTGTATTGGAA...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCTTCCAATACACCTCATaGTGCTTCTCGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLFQYTS*CFSEML
Trigger: CAACATCTCCGAGAAGCAGCATGAGGTGTATTGGAA...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAATTCCAATACACCTCATaGTGCTTCTCGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: WDGVGSAFRACCLTVEEEFQYTS*CFSEML
Trigger: CAACATCTCCGAGAAGCAGCATGAGGTGTATTGGAA...TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGTTCAGCCAAGGGATTaGATATTCTGTCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPVQPRD*IFCPQR
Trigger: CCTCTGAGGACAGAATATGCAATCCCTTGGCTGAAC...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGGTTCAGCCAAGGGATTaGATATTCTGTCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQVQPRD*IFCPQR
Trigger: CCTCTGAGGACAGAATATGCAATCCCTTGGCTGAAC...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp ACCTGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCGAGGTCCATTTCTTCTaGAAGGTCCTCAGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: TCTHPAVLVHEQLSKPVSEVHFF*KVLRPP
Trigger: GGGCGGCCTGAGGACCTTGCAGAAGAAATGGACCTC...GCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCGTTGTAGGCGCACACTaGCGACAGCCCCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVVVGAH*RQPHVV
Trigger: AACAACGTGGGGCTGTCGGCAGTGTGCGCCTACAAC...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCCACTTGGTGTGGGACTaGTCCACTGTGGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVHLVWD*STVVLC
Trigger: GCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTG...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAATGGTCTTTAACGAACTaGAGCGTCTTGTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKWSLTN*SVLSGK
Trigger: TTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCA...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTGGTCTTTAACGAACTaGAGCGTCTTGTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSWSLTN*SVLSGK
Trigger: TTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCA...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTTCCCTGATGGCGTCCTaGAGCCAGCTGAGTGCATGG +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELSLMAS*SQLSAW
Trigger: CCATGCACTCAGCTGGCTGCAGGACGCCATCAGGGA...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTGCCTTCCTCCAGCTCTaGATCATCCGGTCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELAFLQL*IIRSCS
Trigger: GGAGCACGACCGGATGATGCAGAGCTGGAGGAAGGC...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CTGCTGGGAAGACACTCAGTATTTGCTAGGATCACCAGAGGGGTGCGGCTTGACGCCATCCTGGTTACCTaGTTGTGCCAGACAGAACTT +
Preference number: 4 (lower is better)
Translates to: LLGRHSVFARITRGVRLDAILVT*LCQTEL
Trigger: AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGC...GTCAAGCCGCACCCCTCTGGTGATCCTAGCAAATACTGAGTGTCTTCCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCACGTAGAGGAGGAACCTaGACACACCCTGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPRRGGT*THPAVL
Trigger: TAAAACAGCAGGGTGTGTGCAGGTTCCTCCTCTACG...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGCAAAGACTTGACAGATaGACTCCCAGATCGCATCTC +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGQRLDR*TPRSHL
Trigger: GAGATGCGATCTGGGAGTGCATCTGTCAAGTCTTTG...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGCAAAGACTTGACAGATaGACTCCCAGATCGCATCTC +
Preference number: 4 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQQRLDR*TPRSHL
Trigger: GAGATGCGATCTGGGAGTGCATCTGTCAAGTCTTTG...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTGGGTGCTCCCCATTCTaGTGGGAGAAGCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSGCSPF*WEKLPG
Trigger: GCCAGGGAGCTTCTCCCAGCAGAATGGGGAGCACCC...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGATTTCTTGCAGCGCTGTaGTGGTTTCTTACAGAATGG +
Preference number: 4 (lower is better)
Translates to: ESLGRCRISLQSLLPDRRFLAAL*WFLTEW
Trigger: CCATTCTGTAAGAAACCAGCACAGCGCTGCAAGAAA...TCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR GCA 90 bp TTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAAGTCTTCAGAAATCTTTaGAAACCATCAGTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: LGSRLLHCPASAHQVVAQVFRNL*KPSVSS
Trigger: TGACGACACTGATGGTTTGCAAAGATTTCTGAAGAC...TTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGGACAAAGCGAATGTCTaGAGGACCTTCTTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: VRDSFLVATGCPCYSFPTDKANV*RTFFED
Trigger: GTCTTCAAAGAAGGTCCTGCAGACATTCGCTTTGTC...CGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR GCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAGGGCCTCAGAAGAAATaGAAACCATCAGTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGGPQKK*KPSVSS
Trigger: TGACGACACTGATGGTTTGCATTTCTTCTGAGGCCC...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422704.7
CDS-3UTR CCA 90 bp GCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCGTAGTTGTAGATGTCTaGCTCATGAAACTGCACCAG +
Preference number: 4 (lower is better)
Translates to: AVFRAGLGKTVHSCGGPGVVVDV*LMKLHQ
Trigger: CTGGTGCAGTTTCATGAGCCAGACATCTACAACTAC...GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACGGAAGTGGCGCTGAGTaGCTGCAGCACCCGGATGTA +
Preference number: 4 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYGSGAE*LQHPDV
Trigger: TACATCCGGGTGCTGCAGCCACTCAGCGCCACTTCC...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGAAGTGGCGCTGAGTaGCTGCAGCACCCGGATGTA +
Preference number: 4 (lower is better)
Translates to: THPAVLVHEQLSKPVSHPGSGAE*LQHPDV
Trigger: TACATCCGGGTGCTGCAGCCACTCAGCGCCACTTCC...AGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACTGGTCACAGGCCGGCTaGAATGCGTTGGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYWSQAG*NALVPH
Trigger: GTGTGGGACCAACGCATTCCAGCCGGCCTGTGACCA...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAGTCCTCAGGCCGCCCTaGTCCCCCTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKVLRPP*SPLHTL
Trigger: AAGAGTGTGCAAGGGGGACCAGGGCGGCCTGAGGAC...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ACCTGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCAGACCTCCTCGGCTGTaGACAGGTTGTAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: TCTHPAVLVHEQLSKPVSRPPRL*TGCRRT
Trigger: TGTGCGCCTACAACCTGTCCACAGCCGAGGAGGTCT...GCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAAGGAGCTGGTGTAGTTaGCGGCCCGTGCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKRSWCS*RPVPRC
Trigger: ACAGCGAGGCACGGGCCGCCAACTACACCAGCTCCT...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGCTGCAGCGTCTTGTCTaGCAAATTCAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVLQRLV*QIQGAG
Trigger: ACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAG...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCTCATCCATCAAAGGGTaGTCTTTAACGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTSSIKG*SLTNCS
Trigger: GCTGCAGTTCGTTAAAGACCACCCTTTGATGGATGA...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGTCATCCATCAAAGGGTaGTCTTTAACGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VRDSFLVATGCPCYSFPTSSIKG*SLTNCS
Trigger: GCTGCAGTTCGTTAAAGACCACCCTTTGATGGATGA...CGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTCCATCGGGCAGTGCATaGGTCTGCACAGGGACACAG +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELPSGSA*VCTGTQ
Trigger: CTGTGTCCCTGTGCAGACCCATGCACTGCCCGATGG...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGTGTTCAGAGCAGGCTTaGGCAAGACAGTTCACAGTT +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGCSEQA*ARQFTV
Trigger: AACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACA...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp ACCTGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCTGCCCATCAGGTGGTaGCCCAATGGCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: TCTHPAVLVHEQLSKPVSLPIRW*PNGCVQ
Trigger: CTGAACACAGCCATTGGGCCACCACCTGATGGGCAG...GCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCATGTCACAGGCCCACTTaGGTTCCAGGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPCHRPT*VPGFST
Trigger: AGTGGAGAAGCCTGGAACCCAAGTGGGCCTGTGACA...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACATCTTGGAGTTCCTTaGCTAAGTCTGCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSHLGVP*LSLQGG
Trigger: TCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATG...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTTTTCTGCATCAAGTTTaGTGTCCTGTTGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPAFLHQV*CPVAEA
Trigger: AGCTTCTGCAACAGGACACCAAACTTGATGCAGAAA...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTCGGAGGGGGAACGTGTaGAGACAACCAGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELRRGNV*RQPGCL
Trigger: GAGACACCCTGGTTGTCTCCACACGTTCCCCCTCCG...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTTTCAACACGCCATTCTaGAACTTCCAAAAGACCCGG +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRFNTPF*NFQKTR
Trigger: CCGGGTCTTTTGGAAGTTCCAGAATGGCGTGTTGAA...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAACTTCCAGGACGTGCTTaGCGACCACTTGGAAGACCG +
Preference number: 4 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKLPGRA*RPLGRP
Trigger: CGGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAG...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGACCACCAACACTTTGGTaGCAATCCTACTACCTTCTG +
Preference number: 4 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGPPTLW*QSYYLL
Trigger: CAGAAGGTAGTAGGATTGCCACCAAAGTGTTGGTGG...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGCCACCAACACTTTGGTaGCAATCCTACTACCTTCTG +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKPPTLW*QSYYLL
Trigger: CAGAAGGTAGTAGGATTGCCACCAAAGTGTTGGTGG...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTCCACCAACACTTTGGTaGCAATCCTACTACCTTCTG +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRPPTLW*QSYYLL
Trigger: CAGAAGGTAGTAGGATTGCCACCAAAGTGTTGGTGG...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAATGCCACCAACACTTTaGTGGCAATCCTACTACCTT +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPMPPTL*WQSYYL
Trigger: AAGGTAGTAGGATTGCCACCAAAGTGTTGGTGGCAT...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGGAGAAGACCCTTGGGTaGATGCCACCAACACTTTGG +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLEKTLG*MPPTLW
Trigger: CCAAAGTGTTGGTGGCATCCACCCAAGGGTCTTCTC...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCGGGGGAGAAGACCCTTaGGTGGATGCCACCAACACT +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVGGEDP*VDATNT
Trigger: AGTGTTGGTGGCATCCACCCAAGGGTCTTCTCCCCC...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCAGGTTCGTGCCAATCTaGACAACAGGCGATAAGTTA +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLRFVPI*TTGDKL
Trigger: TAACTTATCGCCTGTTGTCCAGATTGGCACGAACCT...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGGTTCGTGCCAATCTaGACAACAGGCGATAAGTTA +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTRFVPI*TTGDKL
Trigger: TAACTTATCGCCTGTTGTCCAGATTGGCACGAACCT...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCAAAGTCTCTTCCCGATaGGTATTTACAAAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLKVSSR*VFTKRG
Trigger: TCCCCGCTTTGTAAATACCCATCGGGAAGAGACTTT...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTACCTCTGGGCCCGACATTaGCCACTTCTGCCGCAAACC +
Preference number: 4 (lower is better)
Translates to: LSKPVSHPGYLLVPDRTYLWARH*PLLPQT
Trigger: GGTTTGCGGCAGAAGTGGCCAATGTCGGGCCCAGAG...GTAAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTCTTGCAGCGCTGTGCTaGTTTCTTACAGAATGGTTC +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPLAALC*FLTEWF
Trigger: GAACCATTCTGTAAGAAACCAGCACAGCGCTGCAAG...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp AGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACGGACCTGAAGTGACTTaGGACAACTTCCAATTCAGT +
Preference number: 4 (lower is better)
Translates to: RISLQSLLPDRRGGTCTHGPEVT*DNFQFS
Trigger: ACTGAATTGGAAGTTGTCCCAAGTCACTTCAGGTCC...GTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTCAAGGTTCCATAGCATaGCTGTCACTCCTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRQGSIA*LSLLCS
Trigger: ACTGCAAAGGAGTGACAGCCATGCTATGGAACCTTG...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR TCA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAGTATCTTATGCCTCTTaGAACTTTCCAGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGVSYAS*NFPVIS
Trigger: AGAAATGACTGGAAAGTTTCAAGAGGCATAAGATAC...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGTCCCAGTTCTCCAGGTaGGGAGGGGTCGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKSQFSR*GGVALT
Trigger: GGTGAGAGCGACCCCTCCTCACCTGGAGAACTGGGA...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGCTCAGCAGCAAGGCTaGGTAGTTGTAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: TSSYQSLLAILVTCLCQTAQQQG*VVVDVW
Trigger: CCAGACATCTACAACTACTCAGCCTTGCTGCTGAGC...TGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp ACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGCTTCTCGGAGATGTTaGGTGCGTTCACAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: TSSYQSLLAILVTCLCQTASRRC*VRSQRR
Trigger: TCTTCGCTGTGAACGCACTCAACATCTCCGAGAAGC...TGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGTTCTCCATCAACCATaGCGGATGTGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTVLHQP*RMCSCV
Trigger: CACACAGCTACACATCCGTCATGGTTGATGGAGAAC...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCACCACAGACACCTCCGTaGAGAAGAAGTAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPPQTPP*RRSRPC
Trigger: ACAGGGTCTACTTCTTCTTCACGGAGGTGTCTGTGG...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTCATCCCGCAGCACATTaGAGACCAAGCCGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELHPAAH*RPSRCL
Trigger: CAGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATG...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAAGTTCACATCTTTCTTaGTTAACCTGGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPSSHLS*LTWACC
Trigger: ACAACAGGCCCAGGTTAATCAAGAAAGATGTGAACT...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCAGTTCACATCTTTCTTaGTTAACCTGGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: AVFRAGLGKTVHSCGGPGSSHLS*LTWACC
Trigger: ACAACAGGCCCAGGTTAATCAAGAAAGATGTGAACT...GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR TCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCGCTGGGTCTCCTCGATaGTGTGAACAGCGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVAGSPR*CEQRAR
Trigger: TCGAGCACGCTGTTCACATCATCGAGGAGACCCAGC...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCTAGGATCTCGCCGCTCATCTCCTaGATCAAACCCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AKQVIVTLLGRHSVFARISPLIS*IKPLLG
Trigger: CCCCAGCAGGGGTTTGATTCAGGAGATGAGCGGCGA...GATCCTAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp GCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCTAGGATCGGGTCTTGTTGGGGTTaGGGTCGGTGTCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: AKQVIVTLLGRHSVFARIGSCWG*GRCQGL
Trigger: GAGTCCCTGACACCGACCTCAACCCCAACAAGACCC...GATCCTAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGGGAGATTTGCATAATTaGCCTATTTGGCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKGDLHN*PIWLSA
Trigger: TGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCC...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp TGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACAAGTTCACACACACAGTaGCACAGTCTTCAGAGATAC +
Preference number: 4 (lower is better)
Translates to: CRISLQSLLPDRRGGTCTSSHTQ*HSLQRY
Trigger: GTATCTCTGAAGACTGTGTCACTGTGTGTGTGAACT...TGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp ATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTTGTATGTGATGGTTCCGTaGGCAAGACTGGCATCCTTG +
Preference number: 4 (lower is better)
Translates to: MHLGVPWLSLQGGEAAGLYVMVP*ARLASL
Trigger: CAAGGATGCCAGTCTTGCTCACGGAACCATCACATA...CAAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTAGAGGAAGAGGGACATaGGGAGGCGGTTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSRGRGT*GGGCRW
Trigger: CCAGCGACAACCGCCTCCTCATGTCCCTCTTCCTCT...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCACGGTCACAGAAATCTaGCTTGGGCTTCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTTVTEI*LGLLLP
Trigger: GGGAAGAAGAAGCCCAAGTCAGATTTCTGTGACCGT...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAGTCGTCGATCCTCTGTaGGTCCTCCCTATCCGTGGG +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKVVDPL*VLPIRG
Trigger: CCCACGGATAGGGAGGACTCACAGAGGATCGACGAC...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCACTTCAGCTCACACTTaGCGTCAAAGGGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCTSAHT*RQRACP
Trigger: GGGACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGT...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGACGAGACTCGGATACTaGACAGGAGAAACACAAAAC +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKTRLGY*TGETQN
Trigger: GTTTTGTGTTTCTCCTGTTCAGTATCCGAGTCTCGT...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGATTCAAGTACTCCGACTaGCTTCGGAACACAAGACTG +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGFKYSD*LRNTRL
Trigger: CAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAA...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ACACTAGAAGTGGCTTCACACTGTCTACAGTTTCCCTCGGGATGGACCCACAATCCAAAGGCGCCCTTGTaGAGGTTCCATCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: TLEVASHCLQFPSGWTHNPKAPL*RFHLSH
Trigger: GTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGG...ATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGTGAAGCCACTTCTAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR TCA 90 bp ACACTAGAAGTGGCTTCACACTGTCTACAGTTTCCCTCGGGATGGACCCACAATGAAAAGAGAGGGCACTaGGGAAGAAGTCGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TLEVASHCLQFPSGWTHNEKRGH*GRSRQE
Trigger: CTCCTGGCGACTTCTTCCTCAGTGCCCTCTCTTTTC...ATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGTGAAGCCACTTCTAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp ACGTGTGGAGACAACCAGGGTGTCTCCAGCATCTTCAGGACACCTGTTGTGATGGGGTATGGGTGCAAATaGCATCGCTGTCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: TCGDNQGVSSIFRTPVVMGYGCK*HRCPKH
Trigger: ATGTTTGGGACAGCGATGGCATTTGCACCCATACCC...CATCACAACAGGTGTCCTGAAGATGCTGGAGACACCCTGGTTGTCTCCACACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTCAATACACCTCATGCTaGTTCTCGGAGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRQYTSC*FSEMLS
Trigger: ACTCAACATCTCCGAGAAGCAGCATGAGGTGTATTG...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTCAATACACCTCATGCTaGTTCTCGGAGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPQYTSC*FSEMLS
Trigger: ACTCAACATCTCCGAGAAGCAGCATGAGGTGTATTG...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTTTCCAATACACCTCATaGTGCTTCTCGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVFQYTS*CFSEML
Trigger: CAACATCTCCGAGAAGCAGCATGAGGTGTATTGGAA...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTCCCCTTGCACACTCTTaGTATCCGTGGGATCAGCAC +
Preference number: 4 (lower is better)
Translates to: HPAVLVHEQLSKPVSHPGPLAHS*YPWDQH
Trigger: GTGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGG...ACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCGAGGTCCATTTCTTCTaGAAGGTCCTCAGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVEVHFF*KVLRPP
Trigger: GGGCGGCCTGAGGACCTTGCAGAAGAAATGGACCTC...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp ATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTTGCTGTGGGGTGAAGAGTaGATAGAACACAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: MHLGVPWLSLQGGEAAGLLWGEE*IEHRHL
Trigger: AAGGTGCCTGTGTTCTATGCACTCTTCACCCCACAG...CAAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GACTATGGCTGGTTTTACAATACAACAGCAGAGCTTAGTGGCTGTGACACAGCCCACTTGGTGTGGGACTaGTCCACTGTGGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: DYGWFYNTTAELSGCDTAHLVWD*STVVLC
Trigger: GCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTG...GGCTGTGTCACAGCCACTAAGCTCTGCTGTTGTATTGTAAAACCAGCCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGTGGTCTTTAACGAACTaGAGCGTCTTGTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGWSLTN*SVLSGK
Trigger: TTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCA...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCATGGTCTTTAACGAACTaGAGCGTCTTGTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPWSLTN*SVLSGK
Trigger: TTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCA...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGGACAAAGCGAATGTCTaGAGGACCTGTGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: FSCPSHASWSSLAKSAGRDKANV*RTCGLA
Trigger: TGCCAGGCCACAGGTCCTGCAGACATTCGCTTTGTC...CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AATTTGTCCAGCTCCAGAAAGAGGGGATGCAAAACAGGTCATTGTCACACTGCTGGCAGTGCATGGGTCTaGACAGGGACACAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: NLSSSRKRGCKTGHCHTAGSAWV*TGTQVS
Trigger: GGAGACCTGTGTCCCTGTGCAGACCCATGCACTGCC...AGCAGTGTGACAATGACCTGTTTTGCATCCCCTCTTTCTGGAGCTGGACAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTCTCATCACAGCAACCTaGACCTTCGAAGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCLITAT*TFEVLF
Trigger: GAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAG...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCCCAGGTGTACTTTCTTaGACAATAAGCCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLPGVLS*TISHSS
Trigger: ACTGGAATGGCTTATTGTGCAAGAAAGTACACCTGG...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACCAGGTGTACTTTCTTaGACAATAAGCCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARPGVLS*TISHSS
Trigger: ACTGGAATGGCTTATTGTGCAAGAAAGTACACCTGG...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420987.5
ENST00000537934.5
CDS-3UTR GCA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTCACTTCCAGGACGTaGTTGGCGACCACTTGGAAG +
Preference number: 4 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCFTSRT*LATTWK
Trigger: CTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGTGAA...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTGTAGTTGTAGATGTCTaGCTCATGAAACTGCACCAG +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPVVVDV*LMKLHQ
Trigger: CTGGTGCAGTTTCATGAGCCAGACATCTACAACTAC...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGATGTTAAGTTCAGGTaGTCACAGGCCGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLDVKFR*SQAGWN
Trigger: ATTCCAGCCGGCCTGTGACCACCTGAACTTAACATC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGGATGTTAAGTTCAGGTaGTCACAGGCCGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLDVKFR*SQAGWN
Trigger: ATTCCAGCCGGCCTGTGACCACCTGAACTTAACATC...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ACGTGTGGAGACAACCAGGGTGTCTCCAGCATCTTCAGGACACCTGTTGTGATGTGTGTAGCTGTGTGCTaGGTCAAAGGGACATCTTCC +
Preference number: 4 (lower is better)
Translates to: TCGDNQGVSSIFRTPVVMCVAVC*VKGTSS
Trigger: GGAAGATGTCCCTTTGACCCAGCACACAGCTACACA...CATCACAACAGGTGTCCTGAAGATGCTGGAGACACCCTGGTTGTCTCCACACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGTCCTCAGAGGACTGTaGGAAGAATTTCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTVLRGL*EEFREM
Trigger: CATCTCCCGAAATTCTTCCCACAGTCCTCTGAGGAC...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACACACTCTTGCTATCCGTaGGATCAGCACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: TSSYQSLLAILVTCLCQTHSCYP*DQHPEH
Trigger: GTGTTCAGGGTGCTGATCCCACGGATAGCAAGAGTG...TGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTAGACCTCCTCGGCTGTaGACAGGTTGTAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELRPPRL*TGCRRT
Trigger: TGTGCGCCTACAACCTGTCCACAGCCGAGGAGGTCT...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAATGCATGTACTTCCCGTaGGAGAAGACCTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKCMYFP*EKTSSA
Trigger: AGCCGAGGAGGTCTTCTCCCACGGGAAGTACATGCA...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GGGATGCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCTACGCACCCACTTGGTGTaGGACTGCTCCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GMQNRSLSHCWEDTQYLLRTHLV*DCSTVV
Trigger: CACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCG...TAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp CACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTATAGCGCACCCACTTaGTGTGGGACTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: HPAVLVHEQLSKPVSHPGYSAPT*CGTAPL
Trigger: CAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATA...ACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ACCTGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCTATAGCGCACCCACTTaGTGTGGGACTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: TCTHPAVLVHEQLSKPVSYSAPT*CGTAPL
Trigger: CAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATA...GCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGTCATCCATCAAAGGGTaGTCTTTAACGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKSSIKG*SLTNCS
Trigger: GCTGCAGTTCGTTAAAGACCACCCTTTGATGGATGA...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCATCATCCATCAAAGGGTaGTCTTTAACGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPSSIKG*SLTNCS
Trigger: GCTGCAGTTCGTTAAAGACCACCCTTTGATGGATGA...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCATCCATCAAAGGGTaGTCTTTAACGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGYLPLLKTHLVDVGRSSSSIKG*SLTNCS
Trigger: GCTGCAGTTCGTTAAAGACCACCCTTTGATGGATGA...AGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTACGAATCAAACCCCTGCTaGGGCTCTCGGTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LSKPVSHPGYLLVPDRTYESNPC*GSRSGA
Trigger: TGCACCAGACCGAGAGCCCCAGCAGGGGTTTGATTC...GTAAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCTGCCCATCAGGTGGTaGCCCAATGGCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: CTHPAVLVHEQLSKPVSHLPIRW*PNGCVQ
Trigger: CTGAACACAGCCATTGGGCCACCACCTGATGGGCAG...ATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACGTCAAGGGGAGTCACTaGGACGGTGTAGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYVKGSH*DGVGSA
Trigger: GGCTGATCCTACACCGTCCCAGTGACTCCCCTTGAC...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAAAAACATTTCAGCACATaGTTTCTTTCCACTATCTGG +
Preference number: 4 (lower is better)
Translates to: LGSRLLHCPASAHQVVAQKHFST*FLSTIW
Trigger: CCAGATAGTGGAAAGAAACCATGTGCTGAAATGTTT...TTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGAAACATTTCAGCACATaGTTTCTTTCCACTATCTGG +
Preference number: 4 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQKHFST*FLSTIW
Trigger: CCAGATAGTGGAAAGAAACCATGTGCTGAAATGTTT...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ACACTAGAAGTGGCTTCACACTGTCTACAGTTTCCCTCGGGATGGACCCACAATTCCTCTGACAGGCACTaGTACACCCCACTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TLEVASHCLQFPSGWTHNSSDRH*YTPLSP
Trigger: AGGAGACAGTGGGGTGTACCAGTGCCTGTCAGAGGA...ATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGTGAAGCCACTTCTAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCGGGGGAGAAGACCCTTaGGTGGATGCCACCAACACT +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVGGEDP*VDATNT
Trigger: AGTGTTGGTGGCATCCACCCAAGGGTCTTCTCCCCC...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGGTTGATGACGATCTTTaGTTCGCAGGATGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLVDDDL*FAGCAG
Trigger: ACCGGCACATCCTGCGAACCAAAGATCGTCATCAAC...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTACTCCGTGCCGCCCGTaGGCCTTCTTCAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSTPCRP*AFFKYS
Trigger: GGAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGT...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCAAGGTTCGTGCCAATCTaGACAACAGGCGATAAGTTA +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPRFVPI*TTGDKL
Trigger: TAACTTATCGCCTGTTGTCCAGATTGGCACGAACCT...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAATCTGACCGACAGCTGTaGGCTCCAGATTGTACCGCA +
Preference number: 4 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKSDRQL*APDCTA
Trigger: TGCGGTACAATCTGGAGCCCACAGCTGTCGGTCAGA...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCACATCTTCAGGACAGTaGCAGGAACAGCGCCGTATG +
Preference number: 4 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCTSSGQ*QEQRRM
Trigger: CATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGT...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAATACAAAGCGGGGAGATaGAGTGTGAAATTAACCAGT +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKYKAGR*SVKLTS
Trigger: ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTA...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGAACAGCGCGGTCCCTaGGAATCCACATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: THPAVLVHEQLSKPVSHPEQRGP*ESTFPS
Trigger: ACTGGGAAATGTGGATTCTCAGGGACCGCGCTGTTC...AGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp TGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTTGGACAGCCTGGAGCTCGTaGACAGCGCGGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: WHQEICIIDLFGFLHQVWTAWSS*TARSLR
Trigger: TCTCAGGGACCGCGCTGTTCACGAGCTCCAGGCTGT...CCAAACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGCTCTGTGCTCCCAGGTaGTCCGGGGTATGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKLCAPR*SGVWVQ
Trigger: TTGCACCCATACCCCGGATCACCTGGGAGCACAGAG...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAGCTCAGCAGCAAGGCTaGGTAGTTGTAGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKAQQQG*VVVDVW
Trigger: CCAGACATCTACAACTACTCAGCCTTGCTGCTGAGC...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAACATCCCGCAGCACATTaGAGACCAAGCCGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKHPAAH*RPSRCL
Trigger: CAGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATG...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTAGTTCACATCTTTCTTaGTTAACCTGGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRSSHLS*LTWACC
Trigger: ACAACAGGCCCAGGTTAATCAAGAAAGATGTGAACT...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTGCTGGGTCTCCTCGATaGTGTGAACAGCGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSAGSPR*CEQRAR
Trigger: TCGAGCACGCTGTTCACATCATCGAGGAGACCCAGC...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCTAGGATCAGTCTTGTTCCCTGCTaGGGAGAGGACAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: AKQVIVTLLGRHSVFARISLVPC*GEDRAA
Trigger: CGCTGCTCTGTCCTCTCCTCAGCAGGGAACAAGACT...GATCCTAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTGAAAACTTCAGGTTATaGGTATGTGATGGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPENFRL*VCDGSV
Trigger: CACGGAACCATCACATACTCATAACCTGAAGTTTTC...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp GAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAAGAACCACAGTGAGCTaGTGGATATTTTACAGGAAA +
Preference number: 4 (lower is better)
Translates to: ESLGRCRISLQSLLPDRRRTTVS*WIFYRK
Trigger: TTTCCTGTAAAATATCCATCAGCTCACTGTGGTTCT...TCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp GCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCAGAACCACAGTGAGCTaGTGGATATTTTACAGGAAA +
Preference number: 4 (lower is better)
Translates to: AVFRAGLGKTVHSCGGPGRTTVS*WIFYRK
Trigger: TTTCCTGTAAAATATCCATCAGCTCACTGTGGTTCT...GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp ACACTAGAAGTGGCTTCACACTGTCTACAGTTTCCCTCGGGATGGACCCACAATTTCTGTCTGAACAACTaGCAAGGTGGGGGCCACTAC +
Preference number: 4 (lower is better)
Translates to: TLEVASHCLQFPSGWTHNFCLNN*QGGGHY
Trigger: GTAGTGGCCCCCACCTTGTCAGTTGTTCAGACAGAA...ATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGTGAAGCCACTTCTAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR TCA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCCTACTACCTTCTGTCTaGACAACTGACAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCLLPSV*TTDKVG
Trigger: CCCCACCTTGTCAGTTGTTCAGACAGAAGGTAGTAG...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTTTCAAGTACTCCGACTaGCTTCGGAACACAAGACTG +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLFKYSD*LRNTRL
Trigger: CAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAA...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAACCCACAATGAAAGCGTaGAACGGCTCAACCCGAGGG +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKPTMKA*NGSTRG
Trigger: CCCTCGGGTTGAGCCGTTTCACGCTTTCATTGTGGG...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGAAATGCTGTATCTTATaGCTCTTGAAACTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQKCCIL*LLKLSS
Trigger: ACTGGAAAGTTTCAAGAGGCATAAGATACAGCATTT...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGACAATACACCTCATGCTaGTTCTCGGAGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGQYTSC*FSEMLS
Trigger: ACTCAACATCTCCGAGAAGCAGCATGAGGTGTATTG...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCATTCCAATACACCTCATaGTGCTTCTCGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSFQYTS*CFSEML
Trigger: CAACATCTCCGAGAAGCAGCATGAGGTGTATTGGAA...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp ACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGGATGTGTAGCTGTGTaGTGGGTCAAAGGGACATCT +
Preference number: 4 (lower is better)
Translates to: TSSYQSLLAILVTCLCQTGCVAV*WVKGTS
Trigger: AGATGTCCCTTTGACCCAGCACACAGCTACACATCC...TGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACGTTCAGCCAAGGGATTaGATATTCTGTCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: HEQLSKPVSHPGYLLVPDVQPRD*IFCPQR
Trigger: CCTCTGAGGACAGAATATGCAATCCCTTGGCTGAAC...GTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAACTGCTCCACTGTGGTaGTCTGCATGTACTTCCCGT +
Preference number: 4 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKTAPLW*SACTSR
Trigger: ACGGGAAGTACATGCAGAGCACCACAGTGGAGCAGT...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTTGGTCTTTAACGAACTaGAGCGTCTTGTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCWSLTN*SVLSGK
Trigger: TTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCA...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR GCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGCACAGTCCTCGCAGGTaGCGTGCTTCCCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKHSPRR*RASHRR
Trigger: CCTTCTGTGGGAAGCACGGCACCTGCGAGGACTGTG...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCTAGGATCGCCTTCAGAGCCTGCTaGCTGACCGTAGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: AKQVIVTLLGRHSVFARIAFRAC*LTVEEE
Trigger: TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGC...GATCCTAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp AGAGGGGATGCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTTCAGCCTTCAGAGCCTaGTGCCTGACCGTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RGDAKQVIVTLLGRHSVFSAFRA*CLTVEE
Trigger: CTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGA...AAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTTGGCACCAGGAGATTTaGATAATTGACCTATTTGGC +
Preference number: 4 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPWHQEI*IIDLFG
Trigger: GCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCA...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGGATCACCAGAGGGGTaGGGCTTGACTTTTAACAGA +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPGSPEG*GLTFNR
Trigger: TCTGTTAAAAGTCAAGCCGCACCCCTCTGGTGATCC...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACCAGGTGTACTTTCTTaGACAATAAGCCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: EAEGMLFSANRGPATFPPPGVLS*TISHSS
Trigger: ACTGGAATGGCTTATTGTGCAAGAAAGTACACCTGG...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCAGGACTGAGGTTGTCTaGACGATGCGGGCTAACCTA +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVRTEVV*TMRANL
Trigger: TAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCT...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCTGCATGTACTTCCCGTaGGAGAAGACCTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVCMYFP*EKTSSA
Trigger: AGCCGAGGAGGTCTTCTCCCACGGGAAGTACATGCA...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGCGCACCCACTTGGTGTaGGACTGCTCCACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKRTHLV*DCSTVV
Trigger: CACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCG...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCACTGCAGCGTCTTGTCTaGCAAATTCAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPLQRLV*QIQGAG
Trigger: ACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAG...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CTGCTGGGAAGACACTCAGTATTTGCTAGGATCACCAGAGGGGTGCGGCTTGACTCATCCATCAAAGGGTaGTCTTTAACGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: LLGRHSVFARITRGVRLDSSIKG*SLTNCS
Trigger: GCTGCAGTTCGTTAAAGACCACCCTTTGATGGATGA...GTCAAGCCGCACCCCTCTGGTGATCCTAGCAAATACTGAGTGTCTTCCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCCAGCAGGGTCTGGACTaGCTCAAAGTCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVQQGLD*LKVLEE
Trigger: CTCTTCCAGGACTTTGAGCCAGTCCAGACCCTGCTG...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AATTTGTCCAGCTCCAGAAAGAGGGGATGCAAAACAGGTCATTGTCACACTGCTGACAGCAGCAGGGTCTaGACTGGCTCAAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: NLSSSRKRGCKTGHCHTADSSRV*TGSKSW
Trigger: CCAGGACTTTGAGCCAGTCCAGACCCTGCTGCTGTC...AGCAGTGTGACAATGACCTGTTTTGCATCCCCTCTTTCTGGAGCTGGACAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAGACAGCAGCAGGGTCTaGACTGGCTCAAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKDSSRV*TGSKSW
Trigger: CCAGGACTTTGAGCCAGTCCAGACCCTGCTGCTGTC...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTGAATCAAACCCCTGCTaGGGCTCTCGGTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSESNPC*GSRSGA
Trigger: TGCACCAGACCGAGAGCCCCAGCAGGGGTTTGATTC...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTGTCCACCTCTCCTGGTaGGTCACTTCAGGTCTCATC +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELVHLSW*VTSGLI
Trigger: GATGAGACCTGAAGTGACCCACCAGGAGAGGTGGAC...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATGTCCACCTCTCCTGGTaGGTCACTTCAGGTCTCATC +
Preference number: 4 (lower is better)
Translates to: CTHPAVLVHEQLSKPVSHVHLSW*VTSGLI
Trigger: GATGAGACCTGAAGTGACCCACCAGGAGAGGTGGAC...ATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACTTCCGTGAGCAAGACTaGCATCCTTGGCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYFREQD*HPWLDG
Trigger: CCCATCCAGCCAAGGATGCCAGTCTTGCTCACGGAA...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCAGACCCGGGCCAGGTTaGATTTTTGGGAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCRPGPG*IFGSIS
Trigger: TGAAATGCTCCCAAAAATCCAACCTGGCCCGGGTCT...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAACTTCCAGGACGTGCTTaGCGACCACTTGGAAGACCG +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKLPGRA*RPLGRP
Trigger: CGGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAG...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAATGCCACCAACACTTTaGTGGCAATCCTACTACCTT +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGMPPTL*WQSYYL
Trigger: AAGGTAGTAGGATTGCCACCAAAGTGTTGGTGGCAT...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACACAGAAATCTGACTTaGGCTTCTTCTTCCCAATTA +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKHRNLT*ASSSQL
Trigger: TAATTGGGAAGAAGAAGCCCAAGTCAGATTTCTGTG...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTTCGGAACACAAGACTaGGATGCAATGCTTGTCATT +
Preference number: 4 (lower is better)
Translates to: PGYLPLLKTHLVDVGRSSFGTQD*DAMLVI
Trigger: AATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAA...AGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTTTCGGAACACAAGACTaGGATGCAATGCTTGTCATT +
Preference number: 4 (lower is better)
Translates to: QQRSSHLSPTTERAQELRFGTQD*DAMLVI
Trigger: AATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAA...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTTCGTGCCAATCTaGACAACAGGCGATAAGTTA +
Preference number: 4 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGRFVPI*TTGDKL
Trigger: TAACTTATCGCCTGTTGTCCAGATTGGCACGAACCT...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGCCTTTGGGGCAAATCTaGCCCACCGTGCATTTTTAT +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLPLGQI*PTVHFY
Trigger: ATAAAAATGCACGGTGGGCCAGATTTGCCCCAAAGG...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR TCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAAGTATCTTATGCCTCTTaGAACTTTCCAGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKVSYAS*NFPVIS
Trigger: AGAAATGACTGGAAAGTTTCAAGAGGCATAAGATAC...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCACTCTGTGCTCCCAGGTaGTCCGGGGTATGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPLCAPR*SGVWVQ
Trigger: TTGCACCCATACCCCGGATCACCTGGGAGCACAGAG...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCACAGCGTGCTCGAGGCTaGTGGCTTTGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPQRARG*WLCAEL
Trigger: GAGCTCTGCACAAAGCCATCAGCCTCGAGCACGCTG...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGGTCTCCTCGATGATGTaGACAGCGTGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKVSSMM*TACSRL
Trigger: CAGCCTCGAGCACGCTGTTCACATCATCGAGGAGAC...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCTGTAAGATTAAAGGCTaGGTAGCTTTAGGACAAGTT +
Preference number: 4 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCCKIKG*VALGQV
Trigger: AACTTGTCCTAAAGCTACTCAGCCTTTAATCTTACA...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCACGGTCACAGAAATCTaGCTTGGGCTTCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVTVTEI*LGLLLP
Trigger: GGGAAGAAGAAGCCCAAGTCAGATTTCTGTGACCGT...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTACGAGACTCGGATACTaGACAGGAGAAACACAAAAC +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLTRLGY*TGETQN
Trigger: GTTTTGTGTTTCTCCTGTTCAGTATCCGAGTCTCGT...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCACGAGACTCGGATACTaGACAGGAGAAACACAAAAC +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTTRLGY*TGETQN
Trigger: GTTTTGTGTTTCTCCTGTTCAGTATCCGAGTCTCGT...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCAATAGACAAGAGGACTaGGGTTGTCTGCACGATGCG +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVNRQED*GCLHDA
Trigger: CGCATCGTGCAGACAACCTCAGTCCTCTTGTCTATT...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCGGGTATGGGTGCAAATaGCATCGCTGTCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVGYGCK*HRCPKH
Trigger: ATGTTTGGGACAGCGATGGCATTTGCACCCATACCC...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAACTCGGAGATGTTGAGTaGGTTCACAGCGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKLGDVE*VHSEDR
Trigger: GCGGTCTTCGCTGTGAACGCACTCAACATCTCCGAG...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACCAATACACCTCATGCTaGTTCTCGGAGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: HEQLSKPVSHPGYLLVPDQYTSC*FSEMLS
Trigger: ACTCAACATCTCCGAGAAGCAGCATGAGGTGTATTG...GTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCTTCCAATACACCTCATaGTGCTTCTCGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTFQYTS*CFSEML
Trigger: CAACATCTCCGAGAAGCAGCATGAGGTGTATTGGAA...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAACCCCTTGCACACTCTTaGTATCCGTGGGATCAGCAC +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKPLAHS*YPWDQH
Trigger: GTGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGG...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp ACCTGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCTGTGGGGTGAAGAGTaGATAGAACACAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: TCTHPAVLVHEQLSKPVSLWGEE*IEHRHL
Trigger: AAGGTGCCTGTGTTCTATGCACTCTTCACCCCACAG...GCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGGATGCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCTATCCACTGTGGTGCTCTaGATGTACTTCCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GMQNRSLSHCWEDTQYLLSTVVL*MYFPWE
Trigger: CTCCCACGGGAAGTACATGCAGAGCACCACAGTGGA...TAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTTCCACTGTGGTGCTCTaGATGTACTTCCCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSSTVVL*MYFPWE
Trigger: CTCCCACGGGAAGTACATGCAGAGCACCACAGTGGA...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCACACAGTCCTCGCAGGTaGCGTGCTTCCCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPHSPRR*RASHRR
Trigger: CCTTCTGTGGGAAGCACGGCACCTGCGAGGACTGTG...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp ATATGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTCCCAGGGCGTGCACGTaGTGTGCCTGGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: IWHQEICIIDLFGFLHQVPRACT*CAWSLR
Trigger: CCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGG...AACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GGGATGCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCTAGACAAAGCGAATGTCTaGAGGACCTGTGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GMQNRSLSHCWEDTQYLLDKANV*RTCGLA
Trigger: TGCCAGGCCACAGGTCCTGCAGACATTCGCTTTGTC...TAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCACTCATCACAGCAACCTaGACCTTCGAAGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPLITAT*TFEVLF
Trigger: GAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAG...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCACAAAGACTTGACAGATaGACTCCCAGATCGCATCTC +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPQRLDR*TPRSHL
Trigger: GAGATGCGATCTGGGAGTGCATCTGTCAAGTCTTTG...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACCAGGTGTACTTTCTTaGACAATAAGCCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSPGVLS*TISHSS
Trigger: ACTGGAATGGCTTATTGTGCAAGAAAGTACACCTGG...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420987.5
ENST00000537934.5
CDS-3UTR GCA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAATCTCTCCAAAAACAATaGTTCCCTCAAGGAATAAAG +
Preference number: 4 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKSLQKQ*FPQGIK
Trigger: CTTTATTCCTTGAGGGAAGCATTGTTTTTGGAGAGA...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTGTCTTCAGAAATCTTTaGAAACCATCAGTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVVFRNL*KPSVSS
Trigger: TGACGACACTGATGGTTTGCAAAGATTTCTGAAGAC...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGTAGTTGTAGATGTCTaGCTCATGAAACTGCACCAG +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTVVVDV*LMKLHQ
Trigger: CTGGTGCAGTTTCATGAGCCAGACATCTACAACTAC...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGCCGGCTGGAATGCGTTaGTCCCACACACGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKPAGMR*SHTRKG
Trigger: CCCTTTACGTGTGTGGGACCAACGCATTCCAGCCGG...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAGATGTTAAGTTCAGGTaGTCACAGGCCGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKDVKFR*SQAGWN
Trigger: ATTCCAGCCGGCCTGTGACCACCTGAACTTAACATC...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAATGTGTAGCTGTGTGCTaGGTCAAAGGGACATCTTCC +
Preference number: 4 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKCVAVC*VKGTSS
Trigger: GGAAGATGTCCCTTTGACCCAGCACACAGCTACACA...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCTAGGATCTGTCTGCAGGACCTGTaGCCTGGCAGAAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: AKQVIVTLLGRHSVFARICLQDL*PGRRGR
Trigger: TCTACCTCTTCTGCCAGGCCACAGGTCCTGCAGACA...GATCCTAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp AGAGGGGATGCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGTCCACCTCTCCTGGTaGGTCACTTCAGGTCTCATC +
Preference number: 4 (lower is better)
Translates to: RGDAKQVIVTLLGRHSVFVHLSW*VTSGLI
Trigger: GATGAGACCTGAAGTGACCCACCAGGAGAGGTGGAC...AAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp CACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTCATCTTGGAGTTCCTTaGCTAAGTCTGCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HPAVLVHEQLSKPVSHPGHLGVP*LSLQGG
Trigger: TCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATG...ACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCACCCAGTCATGCATCTTaGAGTTCCTTGGCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEAPSHAS*SSLAKS
Trigger: AGACTTAGCCAAGGAACTCCAAGATGCATGACTGGG...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAAAACATTTCAGCACATaGTTTCTTTCCACTATCTGG +
Preference number: 4 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPKHFST*FLSTIW
Trigger: CCAGATAGTGGAAAGAAACCATGTGCTGAAATGTTT...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
CDS-3UTR CCA 90 bp AGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTAAACATTTCAGCACATaGTTTCTTTCCACTATCTGG +
Preference number: 4 (lower is better)
Translates to: RDSFLVATGCPCYSFPTPKHFST*FLSTIW
Trigger: CCAGATAGTGGAAAGAAACCATGTGCTGAAATGTTT...AGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CCA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTCAACACGCCATTCTaGAACTTCCAAAAGACCCGG +
Preference number: 4 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCFNTPF*NFQKTR
Trigger: CCGGGTCTTTTGGAAGTTCCAGAATGGCGTGTTGAA...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCTGCTTGGCGACCACTTaGAAGACCGTTTTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTCLATT*KTVLFL
Trigger: TAAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCA...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGTTCTCCGAGTGGAGCTaGGGGACCGTGTTGATGACG +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKFSEWS*GTVLMT
Trigger: CGTCATCAACACGGTCCCCCAGCTCCACTCGGAGAA...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAATTTCAAGCACTGTCTaGGCAGGTATCCCTTATAGC +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRISSTV*AGIPYS
Trigger: GCTATAAGGGATACCTGCCCAGACAGTGCTTGAAAT...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTATTTCAAGCACTGTCTaGGCAGGTATCCCTTATAGC +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLISSTV*AGIPYS
Trigger: GCTATAAGGGATACCTGCCCAGACAGTGCTTGAAAT...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCACAAATCCTATCATGCTaGAAGATAAGACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPQILSC*KIRLST
Trigger: TGTGGACAGTCTTATCTTCCAGCATGATAGGATTTG...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAGTGTCCACCGTGGTGTaGCAAGGTTCCATAGCATGG +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKVSTVV*QGSIAW
Trigger: CCATGCTATGGAACCTTGCCACACCACGGTGGACAC...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCTTATTTTTGGATGGCTaGTTTTCAGCCAAACAGAAC +
Preference number: 4 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTLFLDG*FSAKQN
Trigger: GTTCTGTTTGGCTGAAAACCAGCCATCCAAAAATAA...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450295.5
3UTR CAA 72 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTaGTGCCAGACAGAACTTACTGTCCCAGGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTC*CQTELTVPGKH
Trigger: GTGCTTACCTGGGACAGTAAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCATGTCAAAGCCCACTTaGTACTTCTTCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVMSKPT*YFFRAS
Trigger: TGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACAT...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAGCTTCTCGGAGATGTTaGGTGCGTTCACAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKASRRC*VRSQRR
Trigger: TCTTCGCTGTGAACGCACTCAACATCTCCGAGAAGC...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAGCACCCGGATGTAGTTaGGGCACTCTGTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKAPGCS*GTLSVL
Trigger: CAAAACAGACAGAGTGCCTCAACTACATCCGGGTGC...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAAGTTCACATCTTTCTTaGTTAACCTGGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRSSHLS*LTWACC
Trigger: ACAACAGGCCCAGGTTAATCAAGAAAGATGTGAACT...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp GACTATGGCTGGTTTTACAATACAACAGCAGAGCTTAGTGGCTGTGACACAGCCGGGTATGGGTGCAAATaGCATCGCTGTCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: DYGWFYNTTAELSGCDTAGYGCK*HRCPKH
Trigger: ATGTTTGGGACAGCGATGGCATTTGCACCCATACCC...GGCTGTGTCACAGCCACTAAGCTCTGCTGTTGTATTGTAAAACCAGCCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCAACAGGCCGGCTGGAATaGGTTGGTCCCACACACGTA +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPTGRLE*VGPTHV
Trigger: TACGTGTGTGGGACCAACGCATTCCAGCCGGCCTGT...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCGGATGTGTAGCTGTGTaGTGGGTCAAAGGGACATCT +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVGCVAV*WVKGTS
Trigger: AGATGTCCCTTTGACCCAGCACACAGCTACACATCC...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCCTGTGGGGTGAAGAGTaGATAGAACACAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVLWGEE*IEHRHL
Trigger: AAGGTGCCTGTGTTCTATGCACTCTTCACCCCACAG...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTTGGGTTGTAGGCGCACACTaGCGACAGCCCCACGTTGTT +
Preference number: 4 (lower is better)
Translates to: WHQEICIIDLFGFLHQVWVVGAH*RQPHVV
Trigger: AACAACGTGGGGCTGTCGGCAGTGTGCGCCTACAAC...CCAAACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGAGTAGTTGGCGGCCCGTaGCTCGCTGTCGATGCACGC +
Preference number: 4 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRVVGGP*LAVDAR
Trigger: GCGTGCATCGACAGCGAGGCACGGGCCGCCAACTAC...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACGCCATCCTGGTTACCTaGTTGTGCCAGACAGAACTT +
Preference number: 4 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYAILVT*LCQTEL
Trigger: AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGC...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp ACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTCGTAGAGGAGGAACCTaGACACACCCTGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: THPAVLVHEQLSKPVSHPRRGGT*THPAVL
Trigger: TAAAACAGCAGGGTGTGTGCAGGTTCCTCCTCTACG...AGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTCGTAGAGGAGGAACCTaGACACACCCTGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELRRGGT*THPAVL
Trigger: TAAAACAGCAGGGTGTGTGCAGGTTCCTCCTCTACG...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp TTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGTTCTTGTCCCAGTCATaGATCTTGGAGTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FSCPSHASWSSLAKSAGRFLSQS*ILEFLG
Trigger: GCCAAGGAACTCCAAGATGCATGACTGGGACAAGAA...CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACACCTATTTGGCTTTCTaGATCAAGTTTGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HEQLSKPVSHPGYLLVPDTYLAF*IKFGVL
Trigger: CAGGACACCAAACTTGATGCAGAAAGCCAAATAGGT...GTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCCCAGGTGTACTTTCTTaGACAATAAGCCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTPGVLS*TISHSS
Trigger: ACTGGAATGGCTTATTGTGCAAGAAAGTACACCTGG...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCGGAAGAAAAGGTTCGTaGCAATCTGGACAACAGGCG +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVGRKGS*QSGQQA
Trigger: CGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCC...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTGATGTTAAGTTCAGGTaGTCACAGGCCGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELDVKFR*SQAGWN
Trigger: ATTCCAGCCGGCCTGTGACCACCTGAACTTAACATC...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTTGTGTAGCTGTGTGCTaGGTCAAAGGGACATCTTCC +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELCVAVC*VKGTSS
Trigger: GGAAGATGTCCCTTTGACCCAGCACACAGCTACACA...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACGTCCTCAGAGGACTGTaGGAAGAATTTCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYVLRGL*EEFREM
Trigger: CATCTCCCGAAATTCTTCCCACAGTCCTCTGAGGAC...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCTAGGATCCACTCTTGCTATCCGTaGGATCAGCACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: AKQVIVTLLGRHSVFARIHSCYP*DQHPEH
Trigger: GTGTTCAGGGTGCTGATCCCACGGATAGCAAGAGTG...GATCCTAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGTGCATGTACTTCCCGTaGGAGAAGACCTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKCMYFP*EKTSSA
Trigger: AGCCGAGGAGGTCTTCTCCCACGGGAAGTACATGCA...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTGGGCCTGTTGTCTATTaGGGTTACCGAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELGPVVY*GYRVIH
Trigger: ATGGATGACTCGGTAACCCCAATAGACAACAGGCCC...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTCTGGGGCTCTCGGTCTaGTGCAGAGCCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: HLAKGSLSLRILSNVSRILGLSV*CRATQV
Trigger: GACCTGCGTGGCTCTGCACCAGACCGAGAGCCCCAG...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCAGAATCAAACCCCTGCTaGGGCTCTCGGTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPESNPC*GSRSGA
Trigger: TGCACCAGACCGAGAGCCCCAGCAGGGGTTTGATTC...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ATATGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTAGCCAGCTGAGTGCATaGGCCCTGCCATCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: IWHQEICIIDLFGFLHQVSQLSA*ALPSGS
Trigger: ACTGCCCGATGGCAGGGCCCATGCACTCAGCTGGCT...AACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTCATCTTGGAGTTCCTTaGCTAAGTCTGCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SYQSLLAILVTCLCQTELHLGVP*LSLQGG
Trigger: TCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATG...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCACTTCCAGGACGTGCTTaGCGACCACTTGGAAGACCG +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPLPGRA*RPLGRP
Trigger: CGGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAG...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGGGCCACTACGGGCTTTaGAACCACCTTCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKGHYGL*NHLHFQ
Trigger: CTGGAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCC...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCAGGGGGAGAAGACCCTTaGGTGGATGCCACCAACACT +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPGGEDP*VDATNT
Trigger: AGTGTTGGTGGCATCCACCCAAGGGTCTTCTCCCCC...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTCGCAGGATGTGCCGGTaGGCGCAGGCTTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: HLAKGSLSLRILSNVSRIRRMCR*AQAWEE
Trigger: TTCCTCCCAAGCCTGCGCCCACCGGCACATCCTGCG...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCGTTGATGACGATCTTTaGTTCGCAGGATGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVVDDDL*FAGCAG
Trigger: ACCGGCACATCCTGCGAACCAAAGATCGTCATCAAC...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTGCCGGTGTCCAGGGCTaGCTTGGGGTGCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: HLAKGSLSLRILSNVSRIAGVQG*LGVLPI
Trigger: AATGGGGAGCACCCCAAGCCAGCCCTGGACACCGGC...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCTACAAAGCGGGGAGATaGAGTGTGAAATTAACCAGT +
Preference number: 4 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTYKAGR*SVKLTS
Trigger: ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTA...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
3UTR CAA 72 bp GTCCAGCTCCAGAAAGAGGGGATGCAAAACAGGTCATaGTCACACTGCTGGGAAGACACTCAGTATTTGCTA +
Preference number: 4 (lower is better)
Translates to: VQLQKEGMQNRS*SHCWEDTQYLL
Trigger: TAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCCCTCTTTCTGGAGCTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACATGTCAAAGCCCACTTaGTACTTCTTCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYMSKPT*YFFRAS
Trigger: TGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACAT...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATGTCAAAGCCCACTTaGTACTTCTTCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVMSKPT*YFFRAS
Trigger: TGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACAT...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ATATGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTCTCTGTGCTCCCAGGTaGTCCGGGGTATGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: IWHQEICIIDLFGFLHQVLCAPR*SGVWVQ
Trigger: TTGCACCCATACCCCGGATCACCTGGGAGCACAGAG...AACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACGGAGATTTGCATAATTaGCCTATTTGGCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HEQLSKPVSHPGYLLVPDGDLHN*PIWLSA
Trigger: TGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCC...GTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCATGGGGACTTTGCTGGTaGTGGTGTCTTGCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPWGLCW*WCLARS
Trigger: AGACCGAGCAAGACACCATCACCAGCAAAGTCCCCA...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATGGCACCAGGAGTGGCCGGGCAGGTGTaGTATTGCAGATGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: QNTHETHSIVKKFNMAPGVAGQV*YCRCGS
Trigger: TGAGCCGCATCTGCAATAGCACACCTGCCCGGCCAC...TCCTGGTGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp GCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCTAGGATCCTGTGGGGTGAAGAGTaGATAGAACACAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: AKQVIVTLLGRHSVFARILWGEE*IEHRHL
Trigger: AAGGTGCCTGTGTTCTATGCACTCTTCACCCCACAG...GATCCTAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp TGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATAACCTGCACACACCCTaGTGTTTTAGTTCACGAGCA +
Preference number: 4 (lower is better)
Translates to: CTHPAVLVHEQLSKPVSHNLHTP*CFSSRA
Trigger: TGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGTT...ATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AATTTGTCCAGCTCCAGAAAGAGGGGATGCAAAACAGGTCATTGTCACACTGCTCGTAGAGGAGGAACCTaGACACACCCTGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: NLSSSRKRGCKTGHCHTARRGGT*THPAVL
Trigger: TAAAACAGCAGGGTGTGTGCAGGTTCCTCCTCTACG...AGCAGTGTGACAATGACCTGTTTTGCATCCCCTCTTTCTGGAGCTGGACAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp ACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAACCTATTTGGCTTTCTaGATCAAGTTTGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TSSYQSLLAILVTCLCQTTYLAF*IKFGVL
Trigger: CAGGACACCAAACTTGATGCAGAAAGCCAAATAGGT...TGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGACCTCTCGACTTGGGGTaGGGAGGGGGAACGTGTGGA +
Preference number: 4 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRPLDLG*GGGTCG
Trigger: TCCACACGTTCCCCCTCCGCACCCCAAGTCGAGAGG...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCAGGCTGTGACACAGCCTaGAGCCCACAAGGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPGCDTA*SPQGLN
Trigger: ATTTAGGCCTTGTGGGCTGCAGGCTGTGTCACAGCC...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CCA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGAGACCAAGCCGCTGTCTaGCCGGGAGCAGATGAGTCG +
Preference number: 4 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRDQAAV*PGADES
Trigger: CGACTCATCTGCTCCCGGCCAGACAGCGGCTTGGTC...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCATGCATGTACTTCCCGTaGGAGAAGACCTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPCMYFP*EKTSSA
Trigger: AGCCGAGGAGGTCTTCTCCCACGGGAAGTACATGCA...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTTGGTATAGCGCACCCACTTaGTGTGGGACTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: WHQEICIIDLFGFLHQVWYSAPT*CGTAPL
Trigger: CAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATA...CCAAACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGACTCCAGGCCGCGGCTTaGGTACCGGGCCATTATAGC +
Preference number: 4 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRLQAAA*VPGHYS
Trigger: GCTATAATGGCCCGGTACCCAAGCCGCGGCCTGGAG...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGAAACATTTCAGCACATaGTTTCTTTCCACTATCTGG +
Preference number: 4 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVKHFST*FLSTIW
Trigger: CCAGATAGTGGAAAGAAACCATGTGCTGAAATGTTT...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCGCCAGGTTGGATTTTTaGGAGCATTTCAGTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVARLDF*EHFSSA
Trigger: AGCGGAACTGAAATGCTCCCAAAAATCCAACCTGGC...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCATGCCACCAACACTTTaGTGGCAATCCTACTACCTT +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVMPPTL*WQSYYL
Trigger: AAGGTAGTAGGATTGCCACCAAAGTGTTGGTGGCAT...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAATGCCACCAACACTTTaGTGGCAATCCTACTACCTT +
Preference number: 4 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKMPPTL*WQSYYL
Trigger: AAGGTAGTAGGATTGCCACCAAAGTGTTGGTGGCAT...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAGTTGATGACGATCTTTaGTTCGCAGGATGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKVDDDL*FAGCAG
Trigger: ACCGGCACATCCTGCGAACCAAAGATCGTCATCAAC...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCATTTCAAGCACTGTCTaGGCAGGTATCCCTTATAGC +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVISSTV*AGIPYS
Trigger: GCTATAAGGGATACCTGCCCAGACAGTGCTTGAAAT...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTCACAGAAATCTGACTTaGGCTTCTTCTTCCCAATTA +
Preference number: 4 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLHRNLT*ASSSQL
Trigger: TAATTGGGAAGAAGAAGCCCAAGTCAGATTTCTGTG...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGCACAGAAATCTGACTTaGGCTTCTTCTTCCCAATTA +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLHRNLT*ASSSQL
Trigger: TAATTGGGAAGAAGAAGCCCAAGTCAGATTTCTGTG...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGACATCTTCAGGACAGTaGCAGGAACAGCGCCGTATG +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKTSSGQ*QEQRRM
Trigger: CATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGT...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTACAAAGCGGGGAGATaGAGTGTGAAATTAACCAGT +
Preference number: 4 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCYKAGR*SVKLTS
Trigger: ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTA...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCAAAGTCTCTTCCCGATaGGTATTTACAAAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVKVSSR*VFTKRG
Trigger: TCCCCGCTTTGTAAATACCCATCGGGAAGAGACTTT...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGATGTTTACACCAAAATaGTCAAATCCTATCATGCTG +
Preference number: 4 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKMFTPK*SNPIML
Trigger: CAGCATGATAGGATTTGACCATTTTGGTGTAAACAT...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGGTTCTCCATCAACCATaGCGGATGTGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKVLHQP*RMCSCV
Trigger: CACACAGCTACACATCCGTCATGGTTGATGGAGAAC...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCACCACAGACACCTCCGTaGAGAAGAAGTAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPPQTPP*RRSRPC
Trigger: ACAGGGTCTACTTCTTCTTCACGGAGGTGTCTGTGG...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ATATGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTGCTGGGTCTCCTCGATaGTGTGAACAGCGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: IWHQEICIIDLFGFLHQVAGSPR*CEQRAR
Trigger: TCGAGCACGCTGTTCACATCATCGAGGAGACCCAGC...AACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTTCGCCGCTCATCTCCTaGATCAAACCCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HLAKGSLSLRILSNVSRISPLIS*IKPLLG
Trigger: CCCCAGCAGGGGTTTGATTCAGGAGATGAGCGGCGA...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAACCCACTGTCTCCTTCTaGCAAGTTGAAGATGAGCAA +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKPTVSF*QVEDEQ
Trigger: TTGCTCATCTTCAACTTGTCAGAAGGAGACAGTGGG...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCATTCTGTCTGAACAACTaGCAAGGTGGGGGCCACTAC +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPFCLNN*QGGGHY
Trigger: GTAGTGGCCCCCACCTTGTCAGTTGTTCAGACAGAA...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCAACTTCAGCTCACACTTaGCGTCAAAGGGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPTSAHT*RQRACP
Trigger: GGGACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGT...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AATTTGTCCAGCTCCAGAAAGAGGGGATGCAAAACAGGTCATTGTCACACTGCTGTTCAGCCAAGGGATTaGATATTCTGTCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: NLSSSRKRGCKTGHCHTAVQPRD*IFCPQR
Trigger: CCTCTGAGGACAGAATATGCAATCCCTTGGCTGAAC...AGCAGTGTGACAATGACCTGTTTTGCATCCCCTCTTTCTGGAGCTGGACAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTCGCCCTGGTCCCCCTTaGACACTCTTGCTATCCGTG +
Preference number: 4 (lower is better)
Translates to: HLAKGSLSLRILSNVSRIRPGPP*TLLLSV
Trigger: CACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCG...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGACGCCCTGGTCCCCCTTaGACACTCTTGCTATCCGTG +
Preference number: 4 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRRPGPP*TLLLSV
Trigger: CACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCG...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCAACTGCTCCACTGTGGTaGTCTGCATGTACTTCCCGT +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPTAPLW*SACTSR
Trigger: ACGGGAAGTACATGCAGAGCACCACAGTGGAGCAGT...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTTGGTCACAGGCCGGCTaGAATGCGTTGGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: HLAKGSLSLRILSNVSRIWSQAG*NALVPH
Trigger: GTGTGGGACCAACGCATTCCAGCCGGCCTGTGACCA...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGGTCCTCAGAGGACTGTaGGAAGAATTTCGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKVLRGL*EEFREM
Trigger: CATCTCCCGAAATTCTTCCCACAGTCCTCTGAGGAC...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCACACTCTTGCTATCCGTaGGATCAGCACCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPHSCYP*DQHPEH
Trigger: GTGTTCAGGGTGCTGATCCCACGGATAGCAAGAGTG...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp GTAGAACAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATGGCAGACCAAGCCGCTGTCTaGCCGGGAGCAGATGAGTCG +
Preference number: 4 (lower is better)
Translates to: VEQNTHETHSIVKKFNMADQAAV*PGADES
Trigger: CGACTCATCTGCTCCCGGCCAGACAGCGGCTTGGTC...TGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTGTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp ACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTTCATCCATCAAAGGGTaGTCTTTAACGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: THPAVLVHEQLSKPVSHPSSIKG*SLTNCS
Trigger: GCTGCAGTTCGTTAAAGACCACCCTTTGATGGATGA...AGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACTCATCCATCAAAGGGTaGTCTTTAACGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYSSIKG*SLTNCS
Trigger: GCTGCAGTTCGTTAAAGACCACCCTTTGATGGATGA...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGACCATCGGGCAGTGCATaGGTCTGCACAGGGACACAG +
Preference number: 4 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRPSGSA*VCTGTQ
Trigger: CTGTGTCCCTGTGCAGACCCATGCACTGCCCGATGG...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AATTTGTCCAGCTCCAGAAAGAGGGGATGCAAAACAGGTCATTGTCACACTGCTCCCAGTCATGCATCTTaGAGTTCCTTGGCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: NLSSSRKRGCKTGHCHTAPSHAS*SSLAKS
Trigger: AGACTTAGCCAAGGAACTCCAAGATGCATGACTGGG...AGCAGTGTGACAATGACCTGTTTTGCATCCCCTCTTTCTGGAGCTGGACAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp TTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGTTTCTGCATCAAGTTTaGTGTCCTGTTGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: FSCPSHASWSSLAKSAGRFLHQV*CPVAEA
Trigger: AGCTTCTGCAACAGGACACCAAACTTGATGCAGAAA...CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGAAACATTTCAGCACATaGTTTCTTTCCACTATCTGG +
Preference number: 4 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLKHFST*FLSTIW
Trigger: CCAGATAGTGGAAAGAAACCATGTGCTGAAATGTTT...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
CDS-3UTR CCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAAAACATTTCAGCACATaGTTTCTTTCCACTATCTGG +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRKHFST*FLSTIW
Trigger: CCAGATAGTGGAAAGAAACCATGTGCTGAAATGTTT...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
3UTR CAA 72 bp ATGTATGCTGATCCCACACAAAGGCTGGTAGAGAATTaGTCCAGCTCCAGAAAGAGGGGATGCAAAACAGGT +
Preference number: 4 (lower is better)
Translates to: MYADPTQRLVEN*SSSRKRGCKTG
Trigger: ACCTGTTTTGCATCCCCTCTTTCTGGAGCTGGACAAATTCTCTACCAGCCTTTGTGTGGGATCAGCATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGTATCTTATGCCTCTTaGAACTTTCCAGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPVSYAS*NFPVIS
Trigger: AGAAATGACTGGAAAGTTTCAAGAGGCATAAGATAC...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR TCA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGAAGTCTTGTTCCCTGCTaGGGAGAGGACAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRSLVPC*GEDRAA
Trigger: CGCTGCTCTGTCCTCTCCTCAGCAGGGAACAAGACT...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp AATTTGTCCAGCTCCAGAAAGAGGGGATGCAAAACAGGTCATTGTCACACTGCTAGTTCACACACACAGTaGCACAGTCTTCAGAGATAC +
Preference number: 4 (lower is better)
Translates to: NLSSSRKRGCKTGHCHTASSHTQ*HSLQRY
Trigger: GTATCTCTGAAGACTGTGTCACTGTGTGTGTGAACT...AGCAGTGTGACAATGACCTGTTTTGCATCCCCTCTTTCTGGAGCTGGACAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp CAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATGGCACCAGGAGCAGGCGATGTATGCTaGTCCCACACAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QNTHETHSIVKKFNMAPGAGDVC*SHTKAG
Trigger: ACCAGCCTTTGTGTGGGATCAGCATACATCGCCTGC...TCCTGGTGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGAGCCTGTCTCTCCAATTaGGACACTGGGGTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRACLSN*DTGVGL
Trigger: CAAGCCCACCCCAGTGTCTCAATTGGAGAGACAGGC...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR GCA 90 bp AGAGGGGATGCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTTTCCAATACACCTCATaGTGCTTCTCGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: RGDAKQVIVTLLGRHSVFFQYTS*CFSEML
Trigger: CAACATCTCCGAGAAGCAGCATGAGGTGTATTGGAA...AAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp TGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATTGGCACCAGGAGATTTaGATAATTGACCTATTTGGC +
Preference number: 4 (lower is better)
Translates to: CTHPAVLVHEQLSKPVSHWHQEI*IIDLFG
Trigger: GCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCA...ATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp GCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCTAGGATCAGGTCATTGTCACACTaGTGGGAAGACACTCAGTAT +
Preference number: 4 (lower is better)
Translates to: AKQVIVTLLGRHSVFARIRSLSH*WEDTQY
Trigger: ATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCT...GATCCTAGCAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCATGTGTAGCTGTGTGCTaGGTCAAAGGGACATCTTCC +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPCVAVC*VKGTSS
Trigger: GGAAGATGTCCCTTTGACCCAGCACACAGCTACACA...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTTGGGGGCCTGTTGTCTATTaGGGTTACCGAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: WHQEICIIDLFGFLHQVWGPVVY*GYRVIH
Trigger: ATGGATGACTCGGTAACCCCAATAGACAACAGGCCC...CCAAACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AAGACTCAGAAATTCATCCTCATAACTCCATTTCCCAGTAGAACACTCCACATTCAGCAGGGTCTGGACTaGCTCAAAGTCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KTQKFILITPFPSRTLHIQQGLD*LKVLEE
Trigger: CTCTTCCAGGACTTTGAGCCAGTCCAGACCCTGCTG...AATGTGGAGTGTTCTACTGGGAAATGGAGTTATGAGGATGAATTTCTGAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCAAGACCCGGGCCAGGTTaGATTTTTGGGAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPRPGPG*IFGSIS
Trigger: TGAAATGCTCCCAAAAATCCAACCTGGCCCGGGTCT...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGTTCAACACGCCATTCTaGAACTTCCAAAAGACCCGG +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKFNTPF*NFQKTR
Trigger: CCGGGTCTTTTGGAAGTTCCAGAATGGCGTGTTGAA...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCATCAAAACCCACCTCGTaGATGTGGGAAGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPSKPTS*MWEGPL
Trigger: AAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGA...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTAAAGTCTCTTCCCGATaGGTATTTACAAAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSKVSSR*VFTKRG
Trigger: TCCCCGCTTTGTAAATACCCATCGGGAAGAGACTTT...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAATGTTTACACCAAAATaGTCAAATCCTATCATGCTG +
Preference number: 4 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRMFTPK*SNPIML
Trigger: CAGCATGATAGGATTTGACCATTTTGGTGTAAACAT...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTTGGATGTCAAAGCCCACTTaGTACTTCTTCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: WHQEICIIDLFGFLHQVWMSKPT*YFFRAS
Trigger: TGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACAT...CCAAACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATGGCACCAGGAGCAGAAGCTGAGCATTaGCGGGACAGAGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: QNTHETHSIVKKFNMAPGAEAEH*RDRGIN
Trigger: GTTTATGCCTCTGTCCCGTCAATGCTCAGCTTCTGC...TCCTGGTGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACAGAACAAAACACTCATaGGACTCATTCCATCGTCAA +
Preference number: 4 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYRTKHS*DSFHRQ
Trigger: TTGACGATGGAATGAGTCTCATGAGTGTTTTGTTCT...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTGTCTCCATCTGCGTCTaGGTCAGCGAACTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: HLAKGSLSLRILSNVSRIVSICV*VSELQL
Trigger: GAGCTGAAGTTCGCTGACTCAGACGCAGATGGAGAC...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CCATCGTCAAGAAATTTAATATGGCACCAGGAGATTTGCATAATTGACCTATTTCACTTGGTGTGGGACTaGTCCACTGTGGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSSRNLIWHQEICIIDLFHLVWD*STVVLC
Trigger: GCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTG...AAATAGGTCAATTATGCAAATCTCCTGGTGCCATATTAAATTTCTTGACGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp AATTTGTCCAGCTCCAGAAAGAGGGGATGCAAAACAGGTCATTGTCACACTGCTACCTATTTGGCTTTCTaGATCAAGTTTGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: NLSSSRKRGCKTGHCHTATYLAF*IKFGVL
Trigger: CAGGACACCAAACTTGATGCAGAAAGCCAAATAGGT...AGCAGTGTGACAATGACCTGTTTTGCATCCCCTCTTTCTGGAGCTGGACAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp ACACTAGAAGTGGCTTCACACTGTCTACAGTTTCCCTCGGGATGGACCCACAATTCTCTCCAAAAACAATaGTTCCCTCAAGGAATAAAG +
Preference number: 4 (lower is better)
Translates to: TLEVASHCLQFPSGWTHNSLQKQ*FPQGIK
Trigger: CTTTATTCCTTGAGGGAAGCATTGTTTTTGGAGAGA...ATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGTGAAGCCACTTCTAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR GCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTCAGGCTACCTTCCCTTaGTCAAAACCCACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: HLAKGSLSLRILSNVSRIQATFP*SKPTSW
Trigger: CCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTG...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp AGAGGGGATGCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTTCATTGTCACACTGCTaGGAAGACACTCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: RGDAKQVIVTLLGRHSVFSLSHC*EDTQYL
Trigger: CAAATACTGAGTGTCTTCCCAGCAGTGTGACAATGA...AAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTATGGTTTTCTCCGAGTaGAGCTGGGGGACCGTGTTG +
Preference number: 4 (lower is better)
Translates to: HLAKGSLSLRILSNVSRIMVFSE*SWGTVL
Trigger: CAACACGGTCCCCCAGCTCCACTCGGAGAAAACCAT...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAATTCGGAACACAAGACTaGGATGCAATGCTTGTCATT +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKFGTQD*DAMLVI
Trigger: AATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAA...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCCAAATCCTATCATGCTaGAAGATAAGACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVQILSC*KIRLST
Trigger: TGTGGACAGTCTTATCTTCCAGCATGATAGGATTTG...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ACACTAGAAGTGGCTTCACACTGTCTACAGTTTCCCTCGGGATGGACCCACAATTCCTTTATTTTTGGATaGCTGGTTTTCAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: TLEVASHCLQFPSGWTHNSFIFG*LVFSQT
Trigger: TGTTTGGCTGAAAACCAGCCATCCAAAAATAAAGGA...ATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGTGAAGCCACTTCTAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR TCA 90 bp AGAGGGGATGCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTAGAACAAAACACTCATaGGACTCATTCCATCGTCAA +
Preference number: 4 (lower is better)
Translates to: RGDAKQVIVTLLGRHSVFRTKHS*DSFHRQ
Trigger: TTGACGATGGAATGAGTCTCATGAGTGTTTTGTTCT...AAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp TCCAGCATCTTCAGGACACCTGTTGTGATGGATCCTGAAGGAATTAGCAGGCGAAAATGCTGTATCTTATaGCTCTTGAAACTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SSIFRTPVVMDPEGISRRKCCIL*LLKLSS
Trigger: ACTGGAAAGTTTCAAGAGGCATAAGATACAGCATTT...TCGCCTGCTAATTCCTTCAGGATCCATCACAACAGGTGTCCTGAAGATGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCATTCCAATACACCTCATaGTGCTTCTCGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPFQYTS*CFSEML
Trigger: CAACATCTCCGAGAAGCAGCATGAGGTGTATTGGAA...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp ACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTCTCTTTGACCTTAATTaGCATTTTTCAAAGCACACC +
Preference number: 4 (lower is better)
Translates to: THPAVLVHEQLSKPVSHPLFDLN*HFSKHT
Trigger: GGTGTGCTTTGAAAAATGGCAATTAAGGTCAAAGAG...AGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCAAAAGTCTCTTCCCGATaGGTATTTACAAAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPKVSSR*VFTKRG
Trigger: TCCCCGCTTTGTAAATACCCATCGGGAAGAGACTTT...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTGTTCTCCATCAACCATaGCGGATGTGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: HLAKGSLSLRILSNVSRIVLHQP*RMCSCV
Trigger: CACACAGCTACACATCCGTCATGGTTGATGGAGAAC...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp TGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTTGGGAAAACTTCAGGTTATaGGTATGTGATGGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: WHQEICIIDLFGFLHQVWENFRL*VCDGSV
Trigger: CACGGAACCATCACATACTCATAACCTGAAGTTTTC...CCAAACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp CAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATGGCACCAGGATCAGTTTGTAGTGGTTaGAGCCACACCCAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: QNTHETHSIVKKFNMAPGSVCSG*SHTQSK
Trigger: CTTGCTTTGGGTGTGGCTTCAACCACTACAAACTGA...TCCTGGTGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp ATATGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTTTCTTGTCCCAGTCATaGATCTTGGAGTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: IWHQEICIIDLFGFLHQVFLSQS*ILEFLG
Trigger: GCCAAGGAACTCCAAGATGCATGACTGGGACAAGAA...AACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CCA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGATGTGTAGCTGTGTGCTaGGTCAAAGGGACATCTTCC +
Preference number: 4 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRCVAVC*VKGTSS
Trigger: GGAAGATGTCCCTTTGACCCAGCACACAGCTACACA...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTAAATGCTGTATCTTATaGCTCTTGAAACTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSKCCIL*LLKLSS
Trigger: ACTGGAAAGTTTCAAGAGGCATAAGATACAGCATTT...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGTCTCTCCAAAAACAATaGTTCCCTCAAGGAATAAAG +
Preference number: 4 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKSLQKQ*FPQGIK
Trigger: CTTTATTCCTTGAGGGAAGCATTGTTTTTGGAGAGA...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCACACAGAAATCTGACTTaGGCTTCTTCTTCCCAATTA +
Preference number: 4 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPHRNLT*ASSSQL
Trigger: TAATTGGGAAGAAGAAGCCCAAGTCAGATTTCTGTG...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CCA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAATGTTTACACCAAAATaGTCAAATCCTATCATGCTG +
Preference number: 4 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKMFTPK*SNPIML
Trigger: CAGCATGATAGGATTTGACCATTTTGGTGTAAACAT...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp GTAGAACAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATGGCAATGTCAAAGCCCACTTaGTACTTCTTCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VEQNTHETHSIVKKFNMAMSKPT*YFFRAS
Trigger: TGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACAT...TGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTGTTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp ATATGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTGAGAAGCAGCAGGCTTaGTTTGCATCAATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: IWHQEICIIDLFGFLHQVEKQQA*FASIKA
Trigger: TGCTTTTATTGATGCAAATCAAGCCTGCTGCTTCTC...AACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR TCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTACGAGACTCGGATACTaGACAGGAGAAACACAAAAC +
Preference number: 4 (lower is better)
Translates to: HLAKGSLSLRILSNVSRITRLGY*TGETQN
Trigger: GTTTTGTGTTTCTCCTGTTCAGTATCCGAGTCTCGT...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp CCATCGTCAAGAAATTTAATATGGCACCAGGAGATTTGCATAATTGACCTATTTCAGTTGGACCTGAAGTaGCTTGGGACAACTTCCAAT +
Preference number: 4 (lower is better)
Translates to: PSSRNLIWHQEICIIDLFQLDLK*LGTTSN
Trigger: ATTGGAAGTTGTCCCAAGTCACTTCAGGTCCAACTG...AAATAGGTCAATTATGCAAATCTCCTGGTGCCATATTAAATTTCTTGACGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR GCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTCAATACACCTCATGCTaGTTCTCGGAGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: HLAKGSLSLRILSNVSRIQYTSC*FSEMLS
Trigger: ACTCAACATCTCCGAGAAGCAGCATGAGGTGTATTG...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR GCA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGATGGTCTTTAACGAACTaGAGCGTCTTGTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRWSLTN*SVLSGK
Trigger: TTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCA...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATGGCACCAGGATGGCACCAGGAGATTTaGATAATTGACCTATTTGGC +
Preference number: 4 (lower is better)
Translates to: QNTHETHSIVKKFNMAPGWHQEI*IIDLFG
Trigger: GCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCA...TCCTGGTGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CCA 90 bp CCATCGTCAAGAAATTTAATATGGCACCAGGAGATTTGCATAATTGACCTATTTTGTTCAGAGCAGGCTTaGGCAAGACAGTTCACAGTT +
Preference number: 4 (lower is better)
Translates to: PSSRNLIWHQEICIIDLFCSEQA*ARQFTV
Trigger: AACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACA...AAATAGGTCAATTATGCAAATCTCCTGGTGCCATATTAAATTTCTTGACGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
CDS-3UTR GCA 90 bp CCATCGTCAAGAAATTTAATATGGCACCAGGAGATTTGCATAATTGACCTATTTCAATACACCTCATGCTaGTTCTCGGAGATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: PSSRNLIWHQEICIIDLFQYTSC*FSEMLS
Trigger: ACTCAACATCTCCGAGAAGCAGCATGAGGTGTATTG...AAATAGGTCAATTATGCAAATCTCCTGGTGCCATATTAAATTTCTTGACGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp GTAGAACAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATGGCAAGGTCATTGTCACACTaGTGGGAAGACACTCAGTAT +
Preference number: 4 (lower is better)
Translates to: VEQNTHETHSIVKKFNMARSLSH*WEDTQY
Trigger: ATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCT...TGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTGTTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR GCA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTGGTCAAATCCTATCATaGTGGAAGATAAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: HLAKGSLSLRILSNVSRIGQILS*WKIRLS
Trigger: GGACAGTCTTATCTTCCAGCATGATAGGATTTGACC...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR TCA 90 bp AAGACTCAGAAATTCATCCTCATAACTCCATTTCCCAGTAGAACACTCCACATTTGTAAGATTAAAGGCTaGGTAGCTTTAGGACAAGTT +
Preference number: 4 (lower is better)
Translates to: KTQKFILITPFPSRTLHICKIKG*VALGQV
Trigger: AACTTGTCCTAAAGCTACTCAGCCTTTAATCTTACA...AATGTGGAGTGTTCTACTGGGAAATGGAGTTATGAGGATGAATTTCTGAGTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR TCA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGAGTATCTTATGCCTCTTaGAACTTTCCAGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRVSYAS*NFPVIS
Trigger: AGAAATGACTGGAAAGTTTCAAGAGGCATAAGATAC...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR GCA 90 bp CAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATGGCACCAGGAAAATGCTGTATCTTATaGCTCTTGAAACTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: QNTHETHSIVKKFNMAPGKCCIL*LLKLSS
Trigger: ACTGGAAAGTTTCAAGAGGCATAAGATACAGCATTT...TCCTGGTGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp AGAAAAGAGCGAGCCCAGCTGTCCCGCCTGGGCCATGCAGGGGCGGGAGGCTGCCCGGTGGGCGCAGGCTaGGGAGGAAGGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: RKERAQLSRLGHAGAGGCPVGAG*GGRVMA
Trigger: GGCCATCACCCTTCCTCCCAAGCCTGCGCCCACCGG...GCAGCCTCCCGCCCCTGCATGGCCCAGGCGGGACAGCTGGGCTCGCTCTTTTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS GCA 90 bp GCTTGTCCCTGCCTGTACCCGCTGCCCGGGCCTCACCCGGACACCTaGTCCCAGCCTCTTTTCCCGAGGATCCCACTGCTTCCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: ACPCLYPLPGPHPDT*SQPLFPRIPLLPWP
Trigger: GGGCCAGGGAAGCAGTGGGATCCTCGGGAAAAGAGGCTGGGAGCAGGTGTCCGGGTGAGGCCCGGGCAGCGGGTACAGGCAGGGACAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 90 bp AGCAGCAAAGGCTCACGGCAGCAGGTGGCCGGGCAGGTGTGCTATTaGAGATGCGGCTCAGCGCCCCAGGACCAGGGCCAGCAGCACAGC +
Preference number: 5 (lower is better)
Translates to: SSKGSRQQVAGQVCY*RCGSAPQDQGQQHS
Trigger: GCTGTGCTGCTGGCCCTGGTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCGGCCACCTGCTGCCGTGAGCCTTTGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000418828.1
ENST00000420670.5
ENST00000420681.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000433650.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
ENST00000540475.5
CDS GCA 90 bp GGCTTCAGCAGCAAAGGCTCACGGCAGCAGGTGGCCGGGCAGGTGTaGTATTGCAGATGCGGCTCAGCGCCCCAGGACCAGGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: GFSSKGSRQQVAGQV*YCRCGSAPQDQGQQ
Trigger: CTGCTGGCCCTGGTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCGGCCACCTGCTGCCGTGAGCCTTTGCTGCTGAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000418828.1
ENST00000420670.5
ENST00000420681.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000433650.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
ENST00000540475.5
CDS GCA 90 bp GGCCACCCCATCAGCACCGCACCCTCAGCGGGACAGGGCAGCAGGTaGAAACCCACGTATGTCCCACGGAGGACTGCTGGGGAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: GHPISTAPSAGQGSR*KPTYVPRRTAGELL
Trigger: CAGGAGCTCCCCAGCAGTCCTCCGTGGGACATACGTGGGTTTGCACCTGCTGCCCTGTCCCGCTGAGGGTGCGGTGCTGATGGGGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS-3UTR CAA 90 bp AGAAAAGAGCGAGCCCAGCTGTCCCGCCTGGGCCATGCAGGGGCGGGAGGCTGCGGGAAACTGGGGCCTTaGGGGCAAATCTGGCCCACC +
Preference number: 5 (lower is better)
Translates to: RKERAQLSRLGHAGAGGCGKLGP*GQIWPT
Trigger: GGTGGGCCAGATTTGCCCCAAAGGCCCCAGTTTCCC...GCAGCCTCCCGCCCCTGCATGGCCCAGGCGGGACAGCTGGGCTCGCTCTTTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS GCA 90 bp CCGCTGGCCATCATGTCTTCCATGATGGGACTCCTGGCTTGTCCCTaGCTGTACCCGCTGCCCGGGCCTCACCCGGACACCTGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: PLAIMSSMMGLLACP*LYPLPGPHPDTCSQ
Trigger: CTGGGAGCAGGTGTCCGGGTGAGGCCCGGGCAGCGGGTACAGGCAGGGACAAGCCAGGAGTCCCATCATGGAAGACATGATGGCCAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 90 bp CTGCCATCTCCTGCAGCACTCCTCTGTGTCCTCCCGGCATCCCCATaGATGTGGCCCACTCTGACCTCAGGGCTGGCTGCCTCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LPSPAALLCVLPASP*MWPTLTSGLAASGP
Trigger: TGGCCCCGAGGCAGCCAGCCCTGAGGTCAGAGTGGGCCACATGCATGGGGATGCCGGGAGGACACAGAGGAGTGCTGCAGGAGATGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 90 bp TCTCCTGCAGCACTCCTCTGTGTCCTCCCGGCATCCCCATGCATGTaGCCCACTCTGACCTCAGGGCTGGCTGCCTCGGGGCCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: SPAALLCVLPASPCM*PTLTSGLAASGPAH
Trigger: ATGGGCTGGCCCCGAGGCAGCCAGCCCTGAGGTCAGAGTGGGCCACATGCATGGGGATGCCGGGAGGACACAGAGGAGTGCTGCAGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 90 bp GGAGCCTGGCTGGCCTCAGCTTGTCTGATGGAGAGATCAGGAGGGTaGGCGAGGCAGAGACGTTCCCCTGTGGCCCAGGCTGCCTCGCCT +
Preference number: 5 (lower is better)
Translates to: GAWLASACLMERSGG*ARQRRSPVAQAASP
Trigger: AGGCGAGGCAGCCTGGGCCACAGGGGAACGTCTCTGCCTCGCCCACCCTCCTGATCTCTCCATCAGACAAGCTGAGGCCAGCCAGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS-3UTR CAA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGCCGGTGGGCGCAGGCTaGGGAGGAAGGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAPVGAG*GGRVMA
Trigger: GGCCATCACCCTTCCTCCCAAGCCTGCGCCCACCGG...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS GCA 90 bp AAGCTCCTGCTTGTGGTGGGGCTGGGGAGGCCGGCCAGCCTACTCTaGTGCTTCTGTCTCCCTCAGGCACAGCCTGCATCAGGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: KLLLVVGLGRPASLL*CFCLPQAQPASGQA
Trigger: TGCCTGGCCTGATGCAGGCTGTGCCTGAGGGAGACAGAAGCAGCAGAGTAGGCTGGCCGGCCTCCCCAGCCCCACCACAAGCAGGAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CCA 90 bp TGGACAGAGACATCCCAAGGCTCTGCCATCACCAGGGCCACAGCATaGAGAGGCCCAGAGCTCGGCCAGCTGTGTGCAGAGGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: WTETSQGSAITRATA*RGPELGQLCAEGAG
Trigger: CCCAGCCCCCTCTGCACACAGCTGGCCGAGCTCTGGGCCTCTCCATGCTGTGGCCCTGGTGATGGCAGAGCCTTGGGATGTCTCTGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS-3UTR CAA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTATCGAGGCTGATGGCTTaGTGCAGAGCTCCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVSRLMA*CRAPRS
Trigger: AGACCGGGGAGCTCTGCACAAAGCCATCAGCCTCGA...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCGCTGGGCCTCTCGACTaGGGGTGCGGAGGGGGAACG +
Preference number: 5 (lower is better)
Translates to: GSAFRACCLTVEEEPAHTAGPLD*GCGGGT
Trigger: CGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCCAGC...GGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTGCGGGAGCCTTGGCCTaGGCCCGTCCTGTGGACTTC +
Preference number: 5 (lower is better)
Translates to: GESLGRCRISLQSLLPDRAGALA*ARPVDF
Trigger: GAAGTCCACAGGACGGGCCAAGGCCAAGGCTCCCGC...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS TCA 90 bp CTCGCCCTGAGGAAGGCCTGGAGGGGTGGTGAGACATCCACCCAGTaGCTGAGTTGCTCGGGCCCATCCTGGAAAGTGCCCCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: LALRKAWRGGETSTQ*LSCSGPSWKVPPLP
Trigger: TGGCAGTGGGGGCACTTTCCAGGATGGGCCCGAGCAACTCAGTCACTGGGTGGATGTCTCACCACCCCTCCAGGCCTTCCTCAGGGCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 90 bp GCGATACTCAGCGCTTTCCCTGATGGCGTCCTGCAGCCAGCTGAGTaGATGGGCCCTGCCATCGGGCAGTGCATGGGTCTGCACAGGGAC +
Preference number: 5 (lower is better)
Translates to: AILSAFPDGVLQPAE*MGPAIGQCMGLHRD
Trigger: GTCCCTGTGCAGACCCATGCACTGCCCGATGGCAGGGCCCATGCACTCAGCTGGCTGCAGGACGCCATCAGGGAAAGCGCTGAGTATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000469653.5
ENST00000475255.5
ENST00000492386.5
ENST00000537934.5
CDS GCA 90 bp AACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGATaGACAGCCGGCCTCAGTCTCCATCTGCGTCTGAGTCAGCGAACT +
Preference number: 5 (lower is better)
Translates to: NSPRLDTSQPRHQRG*TAGLSLHLRLSQRT
Trigger: AGTTCGCTGACTCAGACGCAGATGGAGACTGAGGCCGGCTGTGCATCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 90 bp CTTGGGAGGAAGGGTGATGGCCCCGGAGGAGGTGGCCTGCACGGCTaGGGTTGGGGGAGAAGACCCTTGGGTGGATGCCACCAACACTTT +
Preference number: 5 (lower is better)
Translates to: LGRKGDGPGGGGLHG*GWGRRPLGGCHQHF
Trigger: AAAGTGTTGGTGGCATCCACCCAAGGGTCTTCTCCCCCAACCCCAGCCGTGCAGGCCACCTCCTCCGGGGCCATCACCCTTCCTCCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 90 bp GACTTGGGACAACTTCCAATTCAGTCCCTGGGACTGCCCTGGAGGTaGCTTCCCCATGGCCAGCGGGAGCCTTGGCCTTGGCCCGTCCTG +
Preference number: 5 (lower is better)
Translates to: DLGQLPIQSLGLPWR*LPHGQREPWPWPVL
Trigger: CAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGGCAGTCCCAGGGACTGAATTGGAAGTTGTCCCAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 90 bp GGTCTGATGCTGTGGGGCTCAGCAGCCACCAACCTGGATGTGCCTTaGCTCTTCCCAGTGGCGAGCCAGGTGACACTGGTCGCGCCCTCA +
Preference number: 5 (lower is better)
Translates to: GLMLWGSAATNLDVP*LFPVASQVTLVAPS
Trigger: TGAGGGCGCGACCAGTGTCACCTGGCTCGCCACTGGGAAGAGCCAAGGCACATCCAGGTTGGTGGCTGCTGAGCCCCACAGCATCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS-3UTR CAA 90 bp AGGGCGGCAGCAAGGAGACCCTCGAGCTGCTGTCGGGCCCCGCACCCGAGGCTGCGTTCAGCCAAGGGATaGCATATTCTGTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RAAARRPSSCCRAPHPRLRSAKG*HILSSE
Trigger: CTCTGAGGACAGAATATGCAATCCCTTGGCTGAACG...CAGCCTCGGGTGCGGGGCCCGACAGCAGCTCGAGGGTCTCCTTGCTGCCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CAA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCGCCGACAGCCCCACGTaGTTCAGCTGTGGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFADSPT*FSCGVK
Trigger: CTTCACCCCACAGCTGAACAACGTGGGGCTGTCGGC...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGAAGTTCCCCAGGGCGTGCACGTGCTGTGCCTGGTCACTCAGGAAGGGCGGCAGCCGACAGCCCCACGTaGTTCAGCTGTGGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: RSSPGRARAVPGHSGRAAADSPT*FSCGVK
Trigger: CTTCACCCCACAGCTGAACAACGTGGGGCTGTCGGC...TGCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGGGAACTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CAA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTACCCATAAGACCGTACTaGGGGCTCTCGGCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVPIRPY*GLSAFN
Trigger: GTTGAAGGCCGAGAGCCCCAAGTACGGTCTTATGGG...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGGCTGTGGGCTCCAGATaGTACCGCACTCCCATCTCA +
Preference number: 5 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPAVGSR*YRTPIS
Trigger: TGAGATGGGAGTGCGGTACAATCTGGAGCCCACAGC...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAGCAGCGCGTCTGGAGTaGTTCGTTCCTCCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGAARLE*FVPPGG
Trigger: CCCACCGGGAGGAACGAACAACTCCAGACGCGCTGC...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438547.6
CDS TCA 90 bp CCATTCTCTGCACACAGTGCTGGCCGCTGGCCATCATGTCTTCCATaGTGGGACTCCTGGCTTGTCCCTGCCTGTACCCGCTGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: PFSAHSAGRWPSCLP*WDSWLVPACTRCPG
Trigger: GCCCGGGCAGCGGGTACAGGCAGGGACAAGCCAGGAGTCCCATCATGGAAGACATGATGGCCAGCGGCCAGCACTGTGTGCAGAGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 90 bp GAGAGGACAGAGCAGCGATACTCAGCGCTTTCCCTGATGGCGTCCTaGAGCCAGCTGAGTGCATGGGCCCTGCCATCGGGCAGTGCATGG +
Preference number: 5 (lower is better)
Translates to: ERTEQRYSALSLMAS*SQLSAWALPSGSAW
Trigger: CCATGCACTGCCCGATGGCAGGGCCCATGCACTCAGCTGGCTGCAGGACGCCATCAGGGAAAGCGCTGAGTATCGCTGCTCTGTCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000469653.5
ENST00000475255.5
ENST00000492386.5
ENST00000537934.5
CDS GCA 90 bp AGCCAGTGGGGAGGCTGTTCAGTCCCCACCTCCAGATCTCCTCCCTaGAGCAGAGGATGCATGAGCCTGGCACTCCCGGTCATCTTCCCG +
Preference number: 5 (lower is better)
Translates to: SQWGGCSVPTSRSPP*SRGCMSLALPVIFP
Trigger: CGGGAAGATGACCGGGAGTGCCAGGCTCATGCATCCTCTGCTGCAGGGAGGAGATCTGGAGGTGGGGACTGAACAGCCTCCCCACTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS CCA 90 bp CGAACTGCAGCGTCTTGTCTGGCAAATTCAAGGAGCTGGTGTAGTTaGCGGCCCGTGCCTCGCTGTCGATGCACGCTCCAGGCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: RTAASCLANSRSWCS*RPVPRCRCTLQAAA
Trigger: AGCCGCGGCCTGGAGCGTGCATCGACAGCGAGGCACGGGCCGCCAACTACACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000474258.1
ENST00000537934.5
CDS CCA 90 bp ACAGGGCAGCAGGTGCAAACCCACGTATGTCCCACGGAGGACTGCTaGGGAGCTCCTGGAATCCTAGGCCCCCAGTGGGGAGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: TGQQVQTHVCPTEDC*GAPGILGPQWGAVF
Trigger: GAAGACAGCTCCCCACTGGGGGCCTAGGATTCCAGGAGCTCCCCAGCAGTCCTCCGTGGGACATACGTGGGTTTGCACCTGCTGCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS-3UTR CAA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTCGGGCAGGTGTGCTATaGCAGATGCGGCTCAGCGCC +
Preference number: 5 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPARAGVL*QMRLSA
Trigger: GGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCG...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACCGGTGGGCGCAGGCTaGGGAGGAAGGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: EAEGMLFSANRGPATFPPPVGAG*GGRVMA
Trigger: GGCCATCACCCTTCCTCCCAAGCCTGCGCCCACCGG...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCGCAGCGCGTCTGGAGTaGTTCGTTCCTCCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: GSAFRACCLTVEEEPAHTAARLE*FVPPGG
Trigger: CCCACCGGGAGGAACGAACAACTCCAGACGCGCTGC...GGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429836.5
CDS TCA 90 bp GGAGGCCAGCCTCATCCCAGGGCAAGAAGTCTGCGCGGCCAACCCTaGGGGCTACTCCTAGACACTATTTGTTCCAGGTGGCTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GGQPHPRARSLRGQP*GLLLDTICSRWLGW
Trigger: CCACCCCAGCCACCTGGAACAAATAGTGTCTAGGAGTAGCCCTCAGGGTTGGCCGCGCAGACTTCTTGCCCTGGGATGAGGCTGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS GCA 90 bp GATGCCACAGGCTGGAGAGCTCAGACCCTGGCAGGGGCCAGGCCCTaGAGAATTACACTAGGACTGCCGAGTGCAGCACATCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: DATGWRAQTLAGARP*RITLGLPSAAHPGW
Trigger: CCATCCTGGATGTGCTGCACTCGGCAGTCCTAGTGTAATTCTGCAGGGCCTGGCCCCTGCCAGGGTCTGAGCTCTCCAGCCTGTGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS GCA 90 bp ATTTCAGCACATGGTTTCTTTCCACTATCTGGTGTTAGCAGAGTCTaGAGCGCGCGTCCTGCCCGCGGCGGCTCCCGGCCGGGCGAGTTC +
Preference number: 5 (lower is better)
Translates to: ISAHGFFPLSGVSRV*SARPARGGSRPGEF
Trigger: GAACTCGCCCGGCCGGGAGCCGCCGCGGGCAGGACGCGCGCTGCAGACTCTGCTAACACCAGATAGTGGAAAGAAACCATGTGCTGAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422704.7
ENST00000455551.6
CDS CCA 90 bp CTCCAGGCCGCGGCTTGGGTACCGGGCCATTATAGCGCACCCACTTaGTGTGGGACTGCTCCACTGTGGTGCTCTGCATGTACTTCCCGT +
Preference number: 5 (lower is better)
Translates to: LQAAAWVPGHYSAPT*CGTAPLWCSACTSR
Trigger: ACGGGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATAATGGCCCGGTACCCAAGCCGCGGCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CCA 90 bp CTGGGACTGCCCTGGAGGTGGCTTCCCCATGGCCAGCGGGAGCCTTaGCCTTGGCCCGTCCTGTGGACTTCCTGCTCTTTGACCTTAATT +
Preference number: 5 (lower is better)
Translates to: LGLPWRWLPHGQREP*PWPVLWTSCSLTLI
Trigger: AATTAAGGTCAAAGAGCAGGAAGTCCACAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGGCAGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 90 bp GGCAGCGGGCACATCCCCAGAGGGGCCATTCTCTGCACACAGTGCTaGCCGCTGGCCATCATGTCTTCCATGATGGGACTCCTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: GSGHIPRGAILCTQC*PLAIMSSMMGLLAC
Trigger: ACAAGCCAGGAGTCCCATCATGGAAGACATGATGGCCAGCGGCCAGCACTGTGTGCAGAGAATGGCCCCTCTGGGGATGTGCCCGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS-3UTR CAA 90 bp CTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCCGGGCAGGTGTGCTATaGCAGATGCGGCTCAGCGCC +
Preference number: 5 (lower is better)
Translates to: LCSEQAWARQFTVVGDQARAGVL*QMRLSA
Trigger: GGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCG...GGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTATGCTTCTCGGAGATGTaGAGTGCGTTCACAGCGAAG +
Preference number: 5 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVCFSEM*SAFTAK
Trigger: CTTCGCTGTGAACGCACTCAACATCTCCGAGAAGCA...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCCCCCTTGCACACTCTaGCTATCCGTGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: HLGSRLLHCPASAHQVVAPPCTL*LSVGSA
Trigger: TGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGGG...GGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTCCGCCCTGGTCCCCCTaGCACACTCTTGCTATCCGT +
Preference number: 5 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPAPPWSP*HTLAIR
Trigger: ACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCGG...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCGCCGACAGCCCCACGTaGTTCAGCTGTGGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: GALCQGESLGRCRISLQSADSPT*FSCGVK
Trigger: CTTCACCCCACAGCTGAACAACGTGGGGCTGTCGGC...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGGGCTACAGGGTGTCCTaGCTACAGCTTTCCCACGCC +
Preference number: 5 (lower is better)
Translates to: LHCPASAHQVVAQWLCSEGYRVS*LQLSHA
Trigger: GGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCC...CTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAAGCCATGCTAACCCTGTaGGCTATTAGGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LGSRLLHCPASAHQVVAQAMLTL*AIRGWG
Trigger: CCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGC...TTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCCCGAAGACCCGGGCCAGGTaGGATTTTTGGGAGCATTTC +
Preference number: 5 (lower is better)
Translates to: GRNSAVCLRVLWSQLAAPKTRAR*DFWEHF
Trigger: GAAATGCTCCCAAAAATCCAACCTGGCCCGGGTCTT...CGGGGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCTGGGGGAGAAGACCCTaGGGTGGATGCCACCAACAC +
Preference number: 5 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARWGRRP*GGCHQH
Trigger: GTGTTGGTGGCATCCACCCAAGGGTCTTCTCCCCCA...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGAAAAGAGCGAGCCCAGCTGTCCCGCCTGGGCCATGCAGGGGCGGGAGGCTGCAACTTCAGCTCACACTaGACGTCAAAGGGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RKERAQLSRLGHAGAGGCNFSSH*TSKGLS
Trigger: GGACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGTT...GCAGCCTCCCGCCCCTGCATGGCCCAGGCGGGACAGCTGGGCTCGCTCTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CAA 90 bp AGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTGCAGCGCGTCTGGAGTaGTTCGTTCCTCCCGGTGGG +
Preference number: 5 (lower is better)
Translates to: RDSFLVATGCPCYSFPTPAARLE*FVPPGG
Trigger: CCCACCGGGAGGAACGAACAACTCCAGACGCGCTGC...AGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS GCA 90 bp GGACCTGAAGTGACTTGGGACAACTTCCAATTCAGTCCCTGGGACTaGCCTGGAGGTGGCTTCCCCATGGCCAGCGGGAGCCTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: GPEVTWDNFQFSPWD*PGGGFPMASGSLGL
Trigger: AAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGGCAGTCCCAGGGACTGAATTGGAAGTTGTCCCAAGTCACTTCAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS GCA 90 bp CATCCTCACGCAGGGCCTCTGCTCGCCTGGGACGTCTGTCCTGACTaGAGGGGTTTCAAGGGCTCTGTTATTAGTTGGGGCTCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: HPHAGPLLAWDVCPD*RGFKGSVISWGSGQ
Trigger: CTGGCCTGAGCCCCAACTAATAACAGAGCCCTTGAAACCCCTGCAGTCAGGACAGACGTCCCAGGCGAGCAGAGGCCCTGCGTGAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482128.1
CDS CCA 90 bp CCGGGCCATTATAGCGCACCCACTTGGTGTGGGACTGCTCCACTGTaGTGCTCTGCATGTACTTCCCGTGGGAGAAGACCTCCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: PGHYSAPTWCGTAPL*CSACTSRGRRPPRL
Trigger: CAGCCGAGGAGGTCTTCTCCCACGGGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATAATGGCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CCA 90 bp GGTTTTCTCCGAGTGGAGCTGGGGGACCGTGTTGATGACGATCTTTaGTTCGCAGGATGTGCCGGTGGGCGCAGGCTTGGGAGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: GFLRVELGDRVDDDL*FAGCAGGRRLGRKG
Trigger: ACCCTTCCTCCCAAGCCTGCGCCCACCGGCACATCCTGCGAACCAAAGATCGTCATCAACACGGTCCCCCAGCTCCACTCGGAGAAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 90 bp CTGCCCTGGAGGTGGCTTCCCCATGGCCAGCGGGAGCCTTGGCCTTaGCCCGTCCTGTGGACTTCCTGCTCTTTGACCTTAATTGCCATT +
Preference number: 5 (lower is better)
Translates to: LPWRWLPHGQREPWP*PVLWTSCSLTLIAI
Trigger: AATGGCAATTAAGGTCAAAGAGCAGGAAGTCCACAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 90 bp CCAGCCACAGCCCTCCAGGCAGAGAGCTCTCTGGTCCACCTCTCCTaGTGGGTCACTTCTGGAAAACAAGCAGGGTCCCCAGGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: PATALQAESSLVHLS*WVTSGKQAGSPGQS
Trigger: GCTTTGACCTGGGGACCCTGCTTGTTTTCCAGAAGTGACCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCTGGAGGGCTGTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CCA 90 bp CCAGTTAGCAGAGTCTTTCCAGGGGCCATGCTCCTGACCCCACGCTaGTCAGCGTGTCCTCAGCCACCAGGGAGGATGGATACTCAGGAC +
Preference number: 5 (lower is better)
Translates to: PVSRVFPGAMLLTPR*SACPQPPGRMDTQD
Trigger: GTCCTGAGTATCCATCCTCCCTGGTGGCTGAGGACACGCTGACCAGCGTGGGGTCAGGAGCATGGCCCCTGGAAAGACTCTGCTAACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482128.1
CDS-3UTR CAA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTCGGGCAGGTGTGCTATaGCAGATGCGGCTCAGCGCC +
Preference number: 5 (lower is better)
Translates to: QQRSSHLSPTTERAQELRRAGVL*QMRLSA
Trigger: GGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCG...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTCGGGCAGGTGTGCTATaGCAGATGCGGCTCAGCGCC +
Preference number: 5 (lower is better)
Translates to: PGYLPLLKTHLVDVGRSSRAGVL*QMRLSA
Trigger: GGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCG...AGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGCCCCCTTGCACACTCTaGCTATCCGTGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAPPCTL*LSVGSA
Trigger: TGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGGG...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CGATCTGTGCTGGCCATGCTAACCCTGTTGGCTATTAGGGGGTGGGGGCACTCTGCCGACAGCCCCACGTaGTTCAGCTGTGGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: RSVLAMLTLLAIRGWGHSADSPT*FSCGVK
Trigger: CTTCACCCCACAGCTGAACAACGTGGGGCTGTCGGC...AGAGTGCCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGCCAGCACAGATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTGCCGACAGCCCCACGTaGTTCAGCTGTGGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: RDSFLVATGCPCYSFPTPADSPT*FSCGVK
Trigger: CTTCACCCCACAGCTGAACAACGTGGGGCTGTCGGC...AGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CAA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAAGCCGACAGCCCCACGTaGTTCAGCTGTGGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKADSPT*FSCGVK
Trigger: CTTCACCCCACAGCTGAACAACGTGGGGCTGTCGGC...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGGGTCTTGTTGGGGTTGAGGTCGGTGTCAGGGACTCCTTCCTGGTGGCTACAGGCCGACAGCCCCACGTaGTTCAGCTGTGGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: RVLLGLRSVSGTPSWWLQADSPT*FSCGVK
Trigger: CTTCACCCCACAGCTGAACAACGTGGGGCTGTCGGC...CTGTAGCCACCAGGAAGGAGTCCCTGACACCGACCTCAACCCCAACAAGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CAA 90 bp GGGCCTCTCGACTTGGGGTGCGGAGGGGGAACGTGTGGAGACAACCAGGGTGTCACCTGTTGCCCTTCTTaGAAGACAGCAGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: GPLDLGCGGGTCGDNQGVTCCPS*KTAAGS
Trigger: AGACCCTGCTGCTGTCTTCAAAGAAGGGCAACAGGT...GACACCCTGGTTGTCTCCACACGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCGGCTACAGGGTGTCCTaGCTACAGCTTTCCCACGCC +
Preference number: 5 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTGYRVS*LQLSHA
Trigger: GGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCC...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAAGTGGCAGCAGGGTCTaGTTGGGGTTGAGGTCGGTG +
Preference number: 5 (lower is better)
Translates to: GSHWDGVGSAFRACCLTVSGSRV*LGLRSV
Trigger: CACCGACCTCAACCCCAACAAGACCCTGCTGCCACT...TACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGGGCCACTACGGGCTTaGGAACCACCTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: DSGRNSAVCLRVLWSQLAGPLRA*EPPSLP
Trigger: TGGAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCCC...CGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTCCGGTGGGCGCAGGCTaGGGAGGAAGGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLPVGAG*GGRVMA
Trigger: GGCCATCACCCTTCCTCCCAAGCCTGCGCCCACCGG...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGAAGTTCCCCAGGGCGTGCACGTGCTGTGCCTGGTCACTCAGGAAGGGCGGCAAGCTGGGGGACCGTGTaGATGACGATCTTTGGTTCG +
Preference number: 5 (lower is better)
Translates to: RSSPGRARAVPGHSGRAASWGTV*MTIFGS
Trigger: CGAACCAAAGATCGTCATCAACACGGTCCCCCAGCT...TGCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGGGAACTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CAA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGACCAGGCTACCTTCCCTaGCTCAAAACCCACCTCGTG +
Preference number: 5 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGPGYLP*LKTHLV
Trigger: CACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 90 bp CGTCGATCCTCTGTGAGTCCTCCCTATCCGTGGGGACTTTGCTGGTaGTGGTGTCTTGCTCGGTCTCATAGCCGGTGTCCAGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: RRSSVSPPYPWGLCW*WCLARSHSRCPGLA
Trigger: AGCCAGCCCTGGACACCGGCTATGAGACCGAGCAAGACACCATCACCAGCAAAGTCCCCACGGATAGGGAGGACTCACAGAGGATCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 90 bp GGCACCAGCGGGGATGCACAGCCGGCCTCAGTCTCCATCTGCGTCTaGGTCAGCGAACTTCAGCTCACACTTGACGTCAAAGGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: GTSGDAQPASVSICV*VSELQLTLDVKGLV
Trigger: GACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGTTCGCTGACTCAGACGCAGATGGAGACTGAGGCCGGCTGTGCATCCCCGCTGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 90 bp ACTAGGACTGCCGAGTGCAGCACATCCAGGATGGGCTTCCAGCCTTaGGCATGGACTCTGGGCCCGACATTGGCCACTTCTGCCGCAAAC +
Preference number: 5 (lower is better)
Translates to: TRTAECSTSRMGFQP*AWTLGPTLATSAAN
Trigger: GTTTGCGGCAGAAGTGGCCAATGTCGGGCCCAGAGTCCATGCTCAAGGCTGGAAGCCCATCCTGGATGTGCTGCACTCGGCAGTCCTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS GCA 90 bp GTGGGAGAAGACCTCCTCGGCTGTGGACAGGTTGTAGGCGCACACTaGCGACAGCCCCACGTTGTTCAGCTGTGGGGTGAAGAGTGCATA +
Preference number: 5 (lower is better)
Translates to: VGEDLLGCGQVVGAH*RQPHVVQLWGEECI
Trigger: TATGCACTCTTCACCCCACAGCTGAACAACGTGGGGCTGTCGGCAGTGTGCGCCTACAACCTGTCCACAGCCGAGGAGGTCTTCTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS GCA 90 bp GGCCATTATAGCGCACCCACTTGGTGTGGGACTGCTCCACTGTGGTaGTCTGCATGTACTTCCCGTGGGAGAAGACCTCCTCGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: GHYSAPTWCGTAPLW*SACTSRGRRPPRLW
Trigger: CCACAGCCGAGGAGGTCTTCTCCCACGGGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATAATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS GCA 90 bp TCCAGAGCCCTGGGCCCCTCAAAGAGGACCAAGGGCGCCTTCTGCTaGTGCCCTCTGATCCCAGTGGTTCCAAGGGCTCTGATTTCTAAC +
Preference number: 5 (lower is better)
Translates to: SRALGPSKRTKGAFC*CPLIPVVPRALISN
Trigger: GTTAGAAATCAGAGCCCTTGGAACCACTGGGATCAGAGGGCAGCAGCAGAAGGCGCCCTTGGTCCTCTTTGAGGGGCCCAGGGCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 90 bp CTCCCGGCCTTCCTTGCTCGTGAAGTCTGTTGGCCCTCCAGGGGCTaGTGGCCATGTTGGGACAGGCTCAACTCCCTGTTCTTACTGAAG +
Preference number: 5 (lower is better)
Translates to: LPAFLAREVCWPSRG*WPCWDRLNSLFLLK
Trigger: CTTCAGTAAGAACAGGGAGTTGAGCCTGTCCCAACATGGCCAGCAGCCCCTGGAGGGCCAACAGACTTCACGAGCAAGGAAGGCCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CCA 90 bp TGGTGCTCTGCATGTACTTCCCGTGGGAGAAGACCTCCTCGGCTGTaGACAGGTTGTAGGCGCACACTGCCGACAGCCCCACGTTGTTCA +
Preference number: 5 (lower is better)
Translates to: WCSACTSRGRRPPRL*TGCRRTLPTAPRCS
Trigger: TGAACAACGTGGGGCTGTCGGCAGTGTGCGCCTACAACCTGTCCACAGCCGAGGAGGTCTTCTCCCACGGGAAGTACATGCAGAGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CCA 90 bp CCAGTTGGACCTGAAGTGACTTGGGACAACTTCCAATTCAGTCCCTaGGACTGCCCTGGAGGTGGCTTCCCCATGGCCAGCGGGAGCCTT +
Preference number: 5 (lower is better)
Translates to: PVGPEVTWDNFQFSP*DCPGGGFPMASGSL
Trigger: AAGGCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGGCAGTCCCAGGGACTGAATTGGAAGTTGTCCCAAGTCACTTCAGGTCCAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 90 bp GTATGCTCTAGACCACTCAGGGCACTGGACCAGCCCCAGCGCTTCTaGAATGCACCTGTTCATGCCTGCCACTTACTGGCCAAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: VCSRPLRALDQPQRF*NAPVHACHLLAKPP
Trigger: AGGCGGCTTGGCCAGTAAGTGGCAGGCATGAACAGGTGCATTCCAGAAGCGCTGGGGCTGGTCCAGTGCCCTGAGTGGTCTAGAGCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 90 bp ATCTCCCTGACAGTCACCAGGCCGACGCAGCCTAACGTTTCACTCTaGTATGCTCTAGACCACTCAGGGCACTGGACCAGCCCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: ISLTVTRPTQPNVSL*YALDHSGHWTSPSA
Trigger: AGCGCTGGGGCTGGTCCAGTGCCCTGAGTGGTCTAGAGCATACCAGAGTGAAACGTTAGGCTGCGTCGGCCTGGTGACTGTCAGGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 90 bp GGTTTATTACATCAACTCAGGAGTCTGGGGAGGCTGTTGGCAGCCTaGGCTCCAGCACTCAGCCTGTCACTGGGGCACCTCCCACCTGCT +
Preference number: 5 (lower is better)
Translates to: GLLHQLRSLGRLLAA*APALSLSLGHLPPA
Trigger: AGCAGGTGGGAGGTGCCCCAGTGACAGGCTGAGTGCTGGAGCCCAGGCTGCCAACAGCCTCCCCAGACTCCTGAGTTGATGTAATAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 90 bp TCACACACACTCAGACCATCTGTTGCAACCTGCCAGGGTGGAGCCTaGCTGGCCTCAGCTTGTCTGATGGAGAGATCAGGAGGGTGGGCG +
Preference number: 5 (lower is better)
Translates to: SHTLRPSVATCQGGA*LASACLMERSGGWA
Trigger: CGCCCACCCTCCTGATCTCTCCATCAGACAAGCTGAGGCCAGCCAGGCTCCACCCTGGCAGGTTGCAACAGATGGTCTGAGTGTGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CCA 90 bp GCCACAGCCCTCCAGGCAGAGAGCTCTCTGGTCCACCTCTCCTGGTaGGTCACTTCTGGAAAACAAGCAGGGTCCCCAGGTCAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: ATALQAESSLVHLSW*VTSGKQAGSPGQSS
Trigger: AGAGCTTTGACCTGGGGACCCTGCTTGTTTTCCAGAAGTGACCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCTGGAGGGCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CCA 90 bp TGCCCTCCAGCAAAGCGCTTCTCTGCACGTGTTTCTCTTAGCCAGTaGGGAGGCTGTTCAGTCCCCACCTCCAGATCTCCTCCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CPPAKRFSARVSLSQ*GGCSVPTSRSPPCS
Trigger: GCTGCAGGGAGGAGATCTGGAGGTGGGGACTGAACAGCCTCCCCACTGGCTAAGAGAAACACGTGCAGAGAAGCGCTTTGCTGGAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS-3UTR CAA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCACGGGCAGGTGTGCTATaGCAGATGCGGCTCAGCGCC +
Preference number: 5 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPRAGVL*QMRLSA
Trigger: GGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCG...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACGGGCAGGTGTGCTATaGCAGATGCGGCTCAGCGCC +
Preference number: 5 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSRAGVL*QMRLSA
Trigger: GGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCG...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGCGGGCAGGTGTGCTATaGCAGATGCGGCTCAGCGCC +
Preference number: 5 (lower is better)
Translates to: VAQWLCSEQAWARQFTVVRAGVL*QMRLSA
Trigger: GGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCG...CACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GCCCACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGATGTACAAGGTGTCCTaGTCCTCGCTCAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: AHLGSRLLHCPASAHQVVMYKVS*SSLSSK
Trigger: CTTGCTGCTGAGCGAGGACAAGGACACCTTGTACAT...CACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCCCCCCTTGCACACTCTaGCTATCCGTGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTPPCTL*LSVGSA
Trigger: TGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGGG...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTCCCCCTTGCACACTCTaGCTATCCGTGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPAPPCTL*LSVGSA
Trigger: TGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGGG...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AAGAGGACTGAGGTTGTCTGCACGATGCGGGCTAACCTACGCAGCACTGCACGACCGCCCTGGTCCCCCTaGCACACTCTTGCTATCCGT +
Preference number: 5 (lower is better)
Translates to: KRTEVVCTMRANLRSTARPPWSP*HTLAIR
Trigger: ACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCGG...TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGCCGCCCTGGTCCCCCTaGCACACTCTTGCTATCCGT +
Preference number: 5 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQPPWSP*HTLAIR
Trigger: ACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCGG...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCACATCCCGCAGCACATaGAAGACCAAGCCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARTSRST*KTKPLS
Trigger: AGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATGT...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCAGCCGACAGCCCCACGTaGTTCAGCTGTGGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: EAEGMLFSANRGPATFPPADSPT*FSCGVK
Trigger: CTTCACCCCACAGCTGAACAACGTGGGGCTGTCGGC...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GAGCAAGACTGGCATCCTTGGCTGGATGGGCAAGCACACACCTCACAGGCAGCTTCGAGGCTGATGGCTTaGTGCAGAGCTCCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: EQDWHPWLDGQAHTSQAASRLMA*CRAPRS
Trigger: AGACCGGGGAGCTCTGCACAAAGCCATCAGCCTCGA...AGCTGCCTGTGAGGTGTGTGCTTGCCCATCCAGCCAAGGATGCCAGTCTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp CTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTCCTCCAGCTCTTCGAGGCTGATGGCTTaGTGCAGAGCTCCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: LVATGCPCYSFPTPSSSSSRLMA*CRAPRS
Trigger: AGACCGGGGAGCTCTGCACAAAGCCATCAGCCTCGA...AGAGCTGGAGGAAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CAA 90 bp GCCCACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGACCTGTTGCCCTTCTTaGAAGACAGCAGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: AHLGSRLLHCPASAHQVVTCCPS*KTAAGS
Trigger: AGACCCTGCTGCTGTCTTCAAAGAAGGGCAACAGGT...CACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGTGCACCTTCGAAGTCTaGTTCCCTGCTGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRCTFEV*FPAEER
Trigger: CCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCA...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CGATCTGTGCTGGCCATGCTAACCCTGTTGGCTATTAGGGGGTGGGGGCACTCTGGCTACAGGGTGTCCTaGCTACAGCTTTCCCACGCC +
Preference number: 5 (lower is better)
Translates to: RSVLAMLTLLAIRGWGHSGYRVS*LQLSHA
Trigger: GGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCC...AGAGTGCCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGCCAGCACAGATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTGGCTACAGGGTGTCCTaGCTACAGCTTTCCCACGCC +
Preference number: 5 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSGYRVS*LQLSHA
Trigger: GGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCC...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCACGCCTTGGCTACAGGGTGTCCTaGCTACAGCTTTCCCACGCC +
Preference number: 5 (lower is better)
Translates to: GTPSWWLQGVLATAFPRLGYRVS*LQLSHA
Trigger: GGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCC...AAGGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CAA 90 bp CTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGGGTCTTGTTGGGGTaGAGGTCGGTGTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: LPIRWWPNGCVQSRLGQDRVLLG*RSVSGT
Trigger: AGTCCCTGACACCGACCTCAACCCCAACAAGACCCT...GTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp TCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCAGTGGCAGCAGGGTCTaGTTGGGGTTGAGGTCGGTG +
Preference number: 5 (lower is better)
Translates to: SVKGSHWDGVGSAFRACCSGSRV*LGLRSV
Trigger: CACCGACCTCAACCCCAACAAGACCCTGCTGCCACT...GCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGAAGTGGCAGCAGGGTCTaGTTGGGGTTGAGGTCGGTG +
Preference number: 5 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARSGSRV*LGLRSV
Trigger: CACCGACCTCAACCCCAACAAGACCCTGCTGCCACT...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGCCATGCTAACCCTGTaGGCTATTAGGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: ESLGRCRISLQSLLPDRRAMLTL*AIRGWG
Trigger: CCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGC...TCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCATCTTGGAGTTCCTaGGCTAAGTCTGCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQASWSS*AKSAGR
Trigger: CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGC...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GCCCACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGCCAGAGGGGTGCGGCTaGACTTTTAACAGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: AHLGSRLLHCPASAHQVVPEGCG*TFNRGF
Trigger: AAAGCCTCTGTTAAAAGTCAAGCCGCACCCCTCTGG...CACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCAAGACCCGGGCCAGGTaGGATTTTTGGGAGCATTTC +
Preference number: 5 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAKTRAR*DFWEHF
Trigger: GAAATGCTCCCAAAAATCCAACCTGGCCCGGGTCTT...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCCTATCCGTGGGGACTTaGCTGGTGATGGTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARLSVGT*LVMVSC
Trigger: GCAAGACACCATCACCAGCAAAGTCCCCACGGATAG...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCTTGACGTCAAAGGGCTaGTCCCTGGCAGAAAGGTCG +
Preference number: 5 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARLTSKG*SLAERS
Trigger: CGACCTTTCTGCCAGGGACAAGCCCTTTGACGTCAA...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGAACAAGAGGACTGAGGTaGTCTGCACGATGCGGGCTA +
Preference number: 5 (lower is better)
Translates to: ETQNSPRLDTSQPRHQRGTRGLR*SARCGL
Trigger: TAGCCCGCATCGTGCAGACAACCTCAGTCCTCTTGT...TCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACATGGCCAGCGGGAGCCTaGGCCTTGGCCCGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: TSSYQSLLAILVTCLCQTWPAGA*ALARPV
Trigger: CACAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCCA...TGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS TCA 90 bp TGGACTGGCTCAAAGTCCTGGAAGAGCTGGGTCTCCTCGATGATGTaGACAGCGTGCTCGAGGCTGATGGCTTTGTGCAGAGCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: WTGSKSWKSWVSSMM*TACSRLMALCRAPR
Trigger: CCGGGGAGCTCTGCACAAAGCCATCAGCCTCGAGCACGCTGTTCACATCATCGAGGAGACCCAGCTCTTCCAGGACTTTGAGCCAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
ENST00000544513.1
CDS TCA 90 bp CCACCAACCTGGATGTGCCTTGGCTCTTCCCAGTGGCGAGCCAGGTaGCACTGGTCGCGCCCTCAAAGAAGGGAAGTTGTTGTGGCTTAC +
Preference number: 5 (lower is better)
Translates to: PPTWMCLGSSQWRAR*HWSRPQRREVVVAY
Trigger: GTAAGCCACAACAACTTCCCTTCTTTGAGGGCGCGACCAGTGTCACCTGGCTCGCCACTGGGAAGAGCCAAGGCACATCCAGGTTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 90 bp AGAGCCCTGGGCCCCTCAAAGAGGACCAAGGGCGCCTTCTGCTGCTaGCCTCTGATCCCAGTGGTTCCAAGGGCTCTGATTTCTAACACT +
Preference number: 5 (lower is better)
Translates to: RALGPSKRTKGAFCC*PLIPVVPRALISNT
Trigger: AGTGTTAGAAATCAGAGCCCTTGGAACCACTGGGATCAGAGGGCAGCAGCAGAAGGCGCCCTTGGTCCTCTTTGAGGGGCCCAGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 90 bp GCACTGGACCAGCCCCAGCGCTTCTGGAATGCACCTGTTCATGCCTaGCACTTACTGGCCAAGCCGCCTTATCAATGTGGGCAGGAATCC +
Preference number: 5 (lower is better)
Translates to: ALDQPQRFWNAPVHA*HLLAKPPYQCGQES
Trigger: GGATTCCTGCCCACATTGATAAGGCGGCTTGGCCAGTAAGTGGCAGGCATGAACAGGTGCATTCCAGAAGCGCTGGGGCTGGTCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 90 bp AGGGGTTTCAAGGGCTCTGTTATTAGTTGGGGCTCAGGCCAGGACTaGTCCAGCCACAACAAGGCACCCTTCAGCGCAGGGACAAGGTCC +
Preference number: 5 (lower is better)
Translates to: RGFKGSVISWGSGQD*SSHNKAPFSAGTRS
Trigger: GGACCTTGTCCCTGCGCTGAAGGGTGCCTTGTTGTGGCTGGAGCAGTCCTGGCCTGAGCCCCAACTAATAACAGAGCCCTTGAAACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482128.1
CDS CCA 90 bp CCCTGCAGAATTACACTAGGACTGCCGAGTGCAGCACATCCAGGATaGGCTTCCAGCCTTGAGCATGGACTCTGGGCCCGACATTGGCCA +
Preference number: 5 (lower is better)
Translates to: PCRITLGLPSAAHPG*ASSLEHGLWARHWP
Trigger: TGGCCAATGTCGGGCCCAGAGTCCATGCTCAAGGCTGGAAGCCCATCCTGGATGTGCTGCACTCGGCAGTCCTAGTGTAATTCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 90 bp GAGCACAGGGAGTTGATAGCACCACCTTGTCCTGTCCAGCAAGGGTaGCCCAACACACAAGGTCAACTAATTCCCACGACGGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: EHRELIAPPCPVQQG*PNTQGQLIPTTAVA
Trigger: GGCCACGGCCGTCGTGGGAATTAGTTGACCTTGTGTGTTGGGCCACCCTTGCTGGACAGGACAAGGTGGTGCTATCAACTCCCTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 90 bp GTCTGTGACCTTCCTGCAGAATCCACGTGCTATGTCAGGGCTCACTaGGCCTTAGGTCCAAATCCCTCTCTCCCCTGTCTGGGCACCCAC +
Preference number: 5 (lower is better)
Translates to: VCDLPAESTCYVRAH*ALGPNPSLPCLGTH
Trigger: GTGGGTGCCCAGACAGGGGAGAGAGGGATTTGGACCTAAGGCCCAGTGAGCCCTGACATAGCACGTGGATTCTGCAGGAAGGTCACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS-3UTR CAA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTCGGGCAGGTGTGCTATaGCAGATGCGGCTCAGCGCC +
Preference number: 5 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLRAGVL*QMRLSA
Trigger: GGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCG...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCCCCCCTTGCACACTCTaGCTATCCGTGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: LCSEQAWARQFTVVGDQAPPCTL*LSVGSA
Trigger: TGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGGG...GGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp CGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACATCCCGCAGCACATaGAAGACCAAGCCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: RCRISLQSLLPDRRGGTCTSRST*KTKPLS
Trigger: AGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATGT...GCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCACGAACTGCAGCGTCTaGTCTGGCAAATTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAATNCSV*SGKFKE
Trigger: CTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCGT...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TTCCTGTCACAGGCCCACTTGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCTGGGCCTGTTGTCTATaGGGGTTACCGAGTCATCCA +
Preference number: 5 (lower is better)
Translates to: FLSQAHLGSRLLHCPASAWACCL*GLPSHP
Trigger: TGGATGACTCGGTAACCCCAATAGACAACAGGCCCA...GGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCAAGTGGGCCTGTGACAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATTGGGCCTGTTGTCTATaGGGGTTACCGAGTCATCCA +
Preference number: 5 (lower is better)
Translates to: WVPGFSTVPPLPIRWWPNWACCL*GLPSHP
Trigger: TGGATGACTCGGTAACCCCAATAGACAACAGGCCCA...ATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTTCGAGGCTGATGGCTTaGTGCAGAGCTCCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVSRLMA*CRAPRS
Trigger: AGACCGGGGAGCTCTGCACAAAGCCATCAGCCTCGA...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGTCGAGGCTGATGGCTTaGTGCAGAGCTCCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKSRLMA*CRAPRS
Trigger: AGACCGGGGAGCTCTGCACAAAGCCATCAGCCTCGA...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACATCGAGGCTGATGGCTTaGTGCAGAGCTCCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: CRISLQSLLPDRRGGTCTSRLMA*CRAPRS
Trigger: AGACCGGGGAGCTCTGCACAAAGCCATCAGCCTCGA...TGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCTGCACCTTCGAAGTCTaGTTCCCTGCTGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RCRISLQSLLPDRRGGTCCTFEV*FPAEER
Trigger: CCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCA...GCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTTGCACCTTCGAAGTCTaGTTCCCTGCTGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPACTFEV*FPAEER
Trigger: CCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCA...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCAGGGTCTTGTTGGGGTaGAGGTCGGTGTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: AVFRAGLGKTVHSCGGPGRVLLG*RSVSGT
Trigger: AGTCCCTGACACCGACCTCAACCCCAACAAGACCCT...GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCAGGGTCTTGTTGGGGTaGAGGTCGGTGTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: GVRDSFLVATGCPCYSFPRVLLG*RSVSGT
Trigger: AGTCCCTGACACCGACCTCAACCCCAACAAGACCCT...GGGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CAA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGAGGGTCTTGTTGGGGTaGAGGTCGGTGTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRRVLLG*RSVSGT
Trigger: AGTCCCTGACACCGACCTCAACCCCAACAAGACCCT...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGTGTTCAGAGCAGGCTaGGGCAAGACAGTTCACAGT +
Preference number: 5 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQVFRAG*GKTVHS
Trigger: ACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACAC...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCGCATCTTGGAGTTCCTaGGCTAAGTCTGCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: GALCQGESLGRCRISLQSASWSS*AKSAGR
Trigger: CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGC...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp ACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCCAGAGGGGTGCGGCTaGACTTTTAACAGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: TVPPLPIRWWPNGCVQSRPEGCG*TFNRGF
Trigger: AAAGCCTCTGTTAAAAGTCAAGCCGCACCCCTCTGG...CCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAAACTTCCAGGACGTGCTaGGCGACCACTTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKTSRTC*ATTWKT
Trigger: GGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGT...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGACATGAGGAGGCGGTaGTCGCTGGACTTAAGATAC +
Preference number: 5 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARDMRRR*SLDLRY
Trigger: GTATCTTAAGTCCAGCGACAACCGCCTCCTCATGTC...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCAGGCTACCTTCCCTaGCTCAAAACCCACCTCGTG +
Preference number: 5 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKPGYLP*LKTHLV
Trigger: CACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAAGCTGTGGGCTCCAGATaGTACCGCACTCCCATCTCA +
Preference number: 5 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKAVGSR*YRTPIS
Trigger: TGAGATGGGAGTGCGGTACAATCTGGAGCCCACAGC...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS GCA 90 bp CCTGTGTGGCCTGTGTCCCCTAGGACCCCCTTTCTTGCAGCGCTGTaGTGGTTTCTTACAGAATGGTTCTGGGCCTTGGAACAGCATCCC +
Preference number: 5 (lower is better)
Translates to: PVWPVSPRTPFLAAL*WFLTEWFWALEQHP
Trigger: GGGATGCTGTTCCAAGGCCCAGAACCATTCTGTAAGAAACCAGCACAGCGCTGCAAGAAAGGGGGTCCTAGGGGACACAGGCCACACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS GCA 90 bp GAAACAAAGGGAAATGTCACAGAGCAGCTGGAACACACACATGCGTaGCAACAGGCCACTGTGGCTGCTAGGAACGGGGGCCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: ETKGNVTEQLEHTHA*QQATVAARNGGPLQ
Trigger: CTGGAGAGGGCCCCCGTTCCTAGCAGCCACAGTGGCCTGTTGGCACGCATGTGTGTGTTCCAGCTGCTCTGTGACATTTCCCTTTGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 90 bp ACTAGCATCAGGCAAGCAGGCATCCAGGAGCATGGCCTCTGCTTCTaGACCAGTGTGTGGGAAGCAGCCAGAGTGTACCTTCAGGGGACA +
Preference number: 5 (lower is better)
Translates to: TSIRQAGIQEHGLCF*TSVWEAARVYLQGT
Trigger: TGTCCCCTGAAGGTACACTCTGGCTGCTTCCCACACACTGGTGCAGAAGCAGAGGCCATGCTCCTGGATGCCTGCTTGCCTGATGCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS CCA 90 bp GTGTGGCCTGTGTCCCCTAGGACCCCCTTTCTTGCAGCGCTGTGCTaGTTTCTTACAGAATGGTTCTGGGCCTTGGAACAGCATCCCACC +
Preference number: 5 (lower is better)
Translates to: VWPVSPRTPFLAALC*FLTEWFWALEQHPT
Trigger: GGTGGGATGCTGTTCCAAGGCCCAGAACCATTCTGTAAGAAACCAGCACAGCGCTGCAAGAAAGGGGGTCCTAGGGGACACAGGCCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 90 bp TTCAGAAATCTTTGCTTTCCAGGGGCCATGCTCCTGACCCCACGCTaGTCAGCGTGTCCTCAGCCACCAGGGAGGATGGATACTCAGGAC +
Preference number: 5 (lower is better)
Translates to: FRNLCFPGAMLLTPR*SACPQPPGRMDTQD
Trigger: GTCCTGAGTATCCATCCTCCCTGGTGGCTGAGGACACGCTGACCAGCGTGGGGTCAGGAGCATGGCCCCTGGAAAGCAAAGATTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420681.6
CDS CCA 90 bp CAGCCTAACGTTTCACTCTGGTATGCTCTAGACCACTCAGGGCACTaGACCAGCCCCAGCGCTTCTGGAATGCACCTGTTCATGCCTGCC +
Preference number: 5 (lower is better)
Translates to: QPNVSLWYALDHSGH*TSPSASGMHLFMPA
Trigger: GGCAGGCATGAACAGGTGCATTCCAGAAGCGCTGGGGCTGGTCCAGTGCCCTGAGTGGTCTAGAGCATACCAGAGTGAAACGTTAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 90 bp CCAGGCAGAGAGCTCTCTGGTCCACCTCTCCTGGTGGGTCACTTCTaGAAAACAAGCAGGGTCCCCAGGTCAAAGCTCTGTGGGCCTTTA +
Preference number: 5 (lower is better)
Translates to: PGRELSGPPLLVGHF*KTSRVPRSKLCGPL
Trigger: TAAAGGCCCACAGAGCTTTGACCTGGGGACCCTGCTTGTTTTCCAGAAGTGACCCACCAGGAGAGGTGGACCAGAGAGCTCTCTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CCA 90 bp GACGTCTGTCCTGACTGCAGGGGTTTCAAGGGCTCTGTTATTAGTTaGGGCTCAGGCCAGGACTGCTCCAGCCACAACAAGGCACCCTTC +
Preference number: 5 (lower is better)
Translates to: DVCPDCRGFKGSVIS*GSGQDCSSHNKAPF
Trigger: GAAGGGTGCCTTGTTGTGGCTGGAGCAGTCCTGGCCTGAGCCCCAACTAATAACAGAGCCCTTGAAACCCCTGCAGTCAGGACAGACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482128.1
CDS-3UTR CAA 90 bp CCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: PFPHYRKGSGTPCRPWAFNVKAH*ILLQGL
Trigger: GAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATT...GAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGATGTACAAGGTGTCCTaGTCCTCGCTCAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKMYKVS*SSLSSK
Trigger: CTTGCTGCTGAGCGAGGACAAGGACACCTTGTACAT...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTATGCTTCTCGGAGATGTaGAGTGCGTTCACAGCGAAG +
Preference number: 5 (lower is better)
Translates to: GSHWDGVGSAFRACCLTVCFSEM*SAFTAK
Trigger: CTTCGCTGTGAACGCACTCAACATCTCCGAGAAGCA...TACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCTGCTTCTCGGAGATGTaGAGTGCGTTCACAGCGAAG +
Preference number: 5 (lower is better)
Translates to: GALCQGESLGRCRISLQSCFSEM*SAFTAK
Trigger: CTTCGCTGTGAACGCACTCAACATCTCCGAGAAGCA...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCGGCACTCTGTCTGTTTaGATTTCCCCTTTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAGTLSV*ISPFLH
Trigger: GTGCAGAAAAGGGGAAATCAAAACAGACAGAGTGCC...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGGGCACTCTGTCTGTTTaGATTTCCCCTTTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: SRLLHCPASAHQVVAQWLGTLSV*ISPFLH
Trigger: GTGCAGAAAAGGGGAAATCAAAACAGACAGAGTGCC...CAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGACCCCCTTGCACACTCTaGCTATCCGTGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGPPCTL*LSVGSA
Trigger: TGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGGG...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGCCGCCCTGGTCCCCCTaGCACACTCTTGCTATCCGT +
Preference number: 5 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLPPWSP*HTLAIR
Trigger: ACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCGG...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGACATCCCGCAGCACATaGAAGACCAAGCCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRTSRST*KTKPLS
Trigger: AGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATGT...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp TGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATATTAACCTGGGCCTGTaGTCTATTGGGGTTACCGAG +
Preference number: 5 (lower is better)
Translates to: WVPGFSTVPPLPIRWWPNINLGL*SIGVTE
Trigger: CTCGGTAACCCCAATAGACAACAGGCCCAGGTTAAT...ATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACCTGTTGCCCTTCTTaGAAGACAGCAGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: LCPSGGGPMAVFRAGLGKTCCPS*KTAAGS
Trigger: AGACCCTGCTGCTGTCTTCAAAGAAGGGCAACAGGT...CTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGTGCACCTTCGAAGTCTaGTTCCCTGCTGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRCTFEV*FPAEER
Trigger: CCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCA...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCTGCACCTTCGAAGTCTaGTTCCCTGCTGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: AVFRAGLGKTVHSCGGPGCTFEV*FPAEER
Trigger: CCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCA...GCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTGTGTTCAGAGCAGGCTaGGGCAAGACAGTTCACAGT +
Preference number: 5 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPAVFRAG*GKTVHS
Trigger: ACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACAC...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGATGGGGGAGAAGACCCTaGGGTGGATGCCACCAACAC +
Preference number: 5 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGWGRRP*GGCHQH
Trigger: GTGTTGGTGGCATCCACCCAAGGGTCTTCTCCCCCA...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AAGAGGACTGAGGTTGTCTGCACGATGCGGGCTAACCTACGCAGCACTGCACGAGCTGGTGATGGTGTCTaGCTCGGTCTCATAGCCGGT +
Preference number: 5 (lower is better)
Translates to: KRTEVVCTMRANLRSTARAGDGV*LGLIAG
Trigger: ACCGGCTATGAGACCGAGCAAGACACCATCACCAGC...TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CTGGGCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACTATCCGTGGGGACTTaGCTGGTGATGGTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: LGQPGSTQLIQATFPCSKLSVGT*LVMVSC
Trigger: GCAAGACACCATCACCAGCAAAGTCCCCACGGATAG...TTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCACCAGGCTACCTTCCCTaGCTCAAAACCCACCTCGTG +
Preference number: 5 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPPGYLP*LKTHLV
Trigger: CACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 90 bp GACGTCAAAGGGCTTGTCCCTGGCAGAAAGGTCGTCGATCCTCTGTaGGTCCTCCCTATCCGTGGGGACTTTGCTGGTGATGGTGTCTTG +
Preference number: 5 (lower is better)
Translates to: DVKGLVPGRKVVDPL*VLPIRGDFAGDGVL
Trigger: CAAGACACCATCACCAGCAAAGTCCCCACGGATAGGGAGGACTCACAGAGGATCGACGACCTTTCTGCCAGGGACAAGCCCTTTGACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS GCA 90 bp GTGGGGGCCACTACGGGCTTTGGAACCACCTTCACTTCCAGGACGTaGTTGGCGACCACTTGGAAGACCGTTTTGTTCTTAACCCTCTCC +
Preference number: 5 (lower is better)
Translates to: VGATTGFGTTFTSRT*LATTWKTVLFLTLS
Trigger: GGAGAGGGTTAAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS GCA 90 bp GGTCTCCAGAGCTCGCCCATTCTTCTCCCAGACAAAGCGAATGTCTaGAGGACCTGGGGACACAGACCGTTTCCACCTCTGAGTCCACAT +
Preference number: 5 (lower is better)
Translates to: GLQSSPILLPDKANV*RTWGHRPFPPLSPH
Trigger: ATGTGGACTCAGAGGTGGAAACGGTCTGTGTCCCCAGGTCCTGCAGACATTCGCTTTGTCTGGGAGAAGAATGGGCGAGCTCTGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS GCA 90 bp TCCACCGTGGTGTGGCAAGGTTCCATAGCATGGCTGTCACTCCTTTaGAGTGTGGGAGATCAGTCTCAAGACAGGGATCGTGGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: STVVWQGSIAWLSLL*SVGDQSQDRDRGVQ
Trigger: CTGCACCCCACGATCCCTGTCTTGAGACTGATCTCCCACACTGCAAAGGAGTGACAGCCATGCTATGGAACCTTGCCACACCACGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS GCA 90 bp GTGATTACAAAATATGGAGCTGATTCTACTCTGCGACAAACCAGGTaGCCTCTGGGCAGTGGCCTCGCCCTGAGGAAGGCCTGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: VITKYGADSTLRQTR*PLGSGLALRKAWRG
Trigger: ACCCCTCCAGGCCTTCCTCAGGGCGAGGCCACTGCCCAGAGGGCACCTGGTTTGTCGCAGAGTAGAATCAGCTCCATATTTTGTAATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 90 bp GAGAGGCCAGTTACTTCACACACACTCAGACCATCTGTTGCAACCTaGCAGGGTGGAGCCTGGCTGGCCTCAGCTTGTCTGATGGAGAGA +
Preference number: 5 (lower is better)
Translates to: ERPVTSHTLRPSVAT*QGGAWLASACLMER
Trigger: TCTCTCCATCAGACAAGCTGAGGCCAGCCAGGCTCCACCCTGGCAGGTTGCAACAGATGGTCTGAGTGTGTGTGAAGTAACTGGCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS-3UTR CAA 90 bp CTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: LHCPASAHQVVAQWLCSENVKAH*ILLQGL
Trigger: GAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATT...CTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCATGTACAAGGTGTCCTaGTCCTCGCTCAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLMYKVS*SSLSSK
Trigger: CTTGCTGCTGAGCGAGGACAAGGACACCTTGTACAT...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCATGTACAAGGTGTCCTaGTCCTCGCTCAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTMYKVS*SSLSSK
Trigger: CTTGCTGCTGAGCGAGGACAAGGACACCTTGTACAT...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTATGTACAAGGTGTCCTaGTCCTCGCTCAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: PIRWWPNGCVQSRLGQDSMYKVS*SSLSSK
Trigger: CTTGCTGCTGAGCGAGGACAAGGACACCTTGTACAT...ACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGTGCTTCTCGGAGATGTaGAGTGCGTTCACAGCGAAG +
Preference number: 5 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRCFSEM*SAFTAK
Trigger: CTTCGCTGTGAACGCACTCAACATCTCCGAGAAGCA...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp TGCTGTGGTCACAGCTCGCGGCCCCGGCCACCGAGGCCCAGTTCCCTTCCAGTAGCACATTTTGCTTTTTaGTCTTCTGAGACCTTCCAA +
Preference number: 5 (lower is better)
Translates to: CCGHSSRPRPPRPSSLPVAHFAF*SSETFQ
Trigger: TTGGAAGGTCTCAGAAGACAAAAAAGCAAAATGTGC...TACTGGAAGGGAACTGGGCCTCGGTGGCCGGGGCCGCGAGCTGTGACCACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCAAGGGACATCTTCCTTaGCCATCTTCATTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAAKGHLP*PSSFFP
Trigger: GGGGAAAAATGAAGATGGCAAAGGAAGATGTCCCTT...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAACATCCCGCAGCACATaGAAGACCAAGCCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPTSRST*KTKPLS
Trigger: AGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATGT...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGACATCCCGCAGCACATaGAAGACCAAGCCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQTSRST*KTKPLS
Trigger: AGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATGT...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACATCCCGCAGCACATaGAAGACCAAGCCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGTSRST*KTKPLS
Trigger: AGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATGT...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCAGCCGACAGCCCCACGTaGTTCAGCTGTGGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEAADSPT*FSCGVK
Trigger: CTTCACCCCACAGCTGAACAACGTGGGGCTGTCGGC...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCTGGGCCTGTTGTCTATaGGGGTTACCGAGTCATCCA +
Preference number: 5 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTWACCL*GLPSHP
Trigger: TGGATGACTCGGTAACCCCAATAGACAACAGGCCCA...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGTGGGCCTGTTGTCTATaGGGGTTACCGAGTCATCCA +
Preference number: 5 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRWACCL*GLPSHP
Trigger: TGGATGACTCGGTAACCCCAATAGACAACAGGCCCA...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp CGGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCGTGTTCAGAGCAGGCTaGGGCAAGACAGTTCACAGT +
Preference number: 5 (lower is better)
Translates to: RCQGLLPGGYRVSLLQLSVFRAG*GKTVHS
Trigger: ACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACAC...GGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CAA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGGCATCTTGGAGTTCCTaGGCTAAGTCTGCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQASWSS*AKSAGR
Trigger: CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGC...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTGCATCTTGGAGTTCCTaGGCTAAGTCTGCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPASWSS*AKSAGR
Trigger: CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGC...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCGAAGACACTCAGTATTaGCTAGGATCACCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: GRCRISLQSLLPDRRGGTEDTQY*LGSPEG
Trigger: CCCCTCTGGTGATCCTAGCAAATACTGAGTGTCTTC...GGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp AGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCGGCCACTTGGAAGACCGTTTaGTTCTTAACCCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SGRNSAVCLRVLWSQLAATWKTV*FLTLSS
Trigger: AGAGGAGAGGGTTAAGAACAAAACGGTCTTCCAAGT...GGCCGCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGATGGGGGAGAAGACCCTaGGGTGGATGCCACCAACAC +
Preference number: 5 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRWGRRP*GGCHQH
Trigger: GTGTTGGTGGCATCCACCCAAGGGTCTTCTCCCCCA...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAACAAGAGGACTGAGGTaGTCTGCACGATGCGGGCTA +
Preference number: 5 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPTRGLR*SARCGL
Trigger: TAGCCCGCATCGTGCAGACAACCTCAGTCCTCTTGT...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACACTCTGGGCCCGACATaGGCCACTTCTGCCGCAAAC +
Preference number: 5 (lower is better)
Translates to: HEQLSKPVSHPGYLLVPDTLGPT*ATSAAN
Trigger: GTTTGCGGCAGAAGTGGCCAATGTCGGGCCCAGAGT...GTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS TCA 90 bp AGGTCTCATCACAGCAACCTGCACCTTCGAAGTCTTGTTCCCTGCTaGGGAGAGGACAGAGCAGCGATACTCAGCGCTTTCCCTGATGGC +
Preference number: 5 (lower is better)
Translates to: RSHHSNLHLRSLVPC*GEDRAAILSAFPDG
Trigger: GCCATCAGGGAAAGCGCTGAGTATCGCTGCTCTGTCCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000469653.5
ENST00000475255.5
ENST00000492386.5
ENST00000537934.5
CDS TCA 90 bp AAGGAGGAGAGGTACTCAGAACCAGAGGCAAACAAGGCAGGTCTGTaGCCTTCCTGCAGAATCCACGTGCTATGTCAGGGCTCACTGGGC +
Preference number: 5 (lower is better)
Translates to: KEERYSEPEANKAGL*PSCRIHVLCQGSLG
Trigger: GCCCAGTGAGCCCTGACATAGCACGTGGATTCTGCAGGAAGGTCACAGACCTGCCTTGTTTGCCTCTGGTTCTGAGTACCTCTCCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS GCA 90 bp CAGAGGCAAACAAGGCAGGTCTGTGACCTTCCTGCAGAATCCACGTaGTATGTCAGGGCTCACTGGGCCTTAGGTCCAAATCCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QRQTRQVCDLPAEST*YVRAHWALGPNPSL
Trigger: GAGAGAGGGATTTGGACCTAAGGCCCAGTGAGCCCTGACATAGCACGTGGATTCTGCAGGAAGGTCACAGACCTGCCTTGTTTGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS GCA 90 bp AGAAGAACTAGCATCAGGCAAGCAGGCATCCAGGAGCATGGCCTCTaGTTCTGCACCAGTGTGTGGGAAGCAGCCAGAGTGTACCTTCAG +
Preference number: 5 (lower is better)
Translates to: RRTSIRQAGIQEHGL*FCTSVWEAARVYLQ
Trigger: CTGAAGGTACACTCTGGCTGCTTCCCACACACTGGTGCAGAAGCAGAGGCCATGCTCCTGGATGCCTGCTTGCCTGATGCTAGTTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS CCA 90 bp GGGTTGGGGGAGAAGACCCTTGGGTGGATGCCACCAACACTTTGGTaGCAATCCTACTACCTTCTGTCTGAACAACTGACAAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: GLGEKTLGWMPPTLW*QSYYLLSEQLTRWG
Trigger: CCCCCACCTTGTCAGTTGTTCAGACAGAAGGTAGTAGGATTGCCACCAAAGTGTTGGTGGCATCCACCCAAGGGTCTTCTCCCCCAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 90 bp AGTGCAGCACATCCAGGATGGGCTTCCAGCCTTGAGCATGGACTCTaGGCCCGACATTGGCCACTTCTGCCGCAAACCTCTGTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: SAAHPGWASSLEHGL*ARHWPLLPQTSVVF
Trigger: AAAAACAACAGAGGTTTGCGGCAGAAGTGGCCAATGTCGGGCCCAGAGTCCATGCTCAAGGCTGGAAGCCCATCCTGGATGTGCTGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 90 bp TGGCTTCCCCATGGCCAGCGGGAGCCTTGGCCTTGGCCCGTCCTGTaGACTTCCTGCTCTTTGACCTTAATTGCCATTTTTCAAAGCACA +
Preference number: 5 (lower is better)
Translates to: WLPHGQREPWPWPVL*TSCSLTLIAIFQST
Trigger: TGTGCTTTGAAAAATGGCAATTAAGGTCAAAGAGCAGGAAGTCCACAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 90 bp AGCTCGCCCATTCTTCTCCCAGACAAAGCGAATGTCTGCAGGACCTaGGGACACAGACCGTTTCCACCTCTGAGTCCACATTTAGGACCC +
Preference number: 5 (lower is better)
Translates to: SSPILLPDKANVCRT*GHRPFPPLSPHLGP
Trigger: GGGTCCTAAATGTGGACTCAGAGGTGGAAACGGTCTGTGTCCCCAGGTCCTGCAGACATTCGCTTTGTCTGGGAGAAGAATGGGCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 90 bp AGCCCCAGCGCTTCTGGAATGCACCTGTTCATGCCTGCCACTTACTaGCCAAGCCGCCTTATCAATGTGGGCAGGAATCCTGAACCTCTT +
Preference number: 5 (lower is better)
Translates to: SPSASGMHLFMPATY*PSRLINVGRNPEPL
Trigger: AAGAGGTTCAGGATTCCTGCCCACATTGATAAGGCGGCTTGGCCAGTAAGTGGCAGGCATGAACAGGTGCATTCCAGAAGCGCTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 90 bp GGGTCACTTCTGGAAAACAAGCAGGGTCCCCAGGTCAAAGCTCTGTaGGCCTTTATGGCACCCTTGATGCCCACTGGCCACCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: GSLLENKQGPQVKAL*AFMAPLMPTGHLSQ
Trigger: TTGAGAAAGGTGGCCAGTGGGCATCAAGGGTGCCATAAAGGCCCACAGAGCTTTGACCTGGGGACCCTGCTTGTTTTCCAGAAGTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS-3UTR CAA 90 bp GGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: GSAFRACCLTVEEEPAHTNVKAH*ILLQGL
Trigger: GAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATT...GGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: GALCQGESLGRCRISLQSNVKAH*ILLQGL
Trigger: GAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATT...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGATGTACAAGGTGTCCTaGTCCTCGCTCAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQMYKVS*SSLSSK
Trigger: CTTGCTGCTGAGCGAGGACAAGGACACCTTGTACAT...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCATGCTTCTCGGAGATGTaGAGTGCGTTCACAGCGAAG +
Preference number: 5 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPCFSEM*SAFTAK
Trigger: CTTCGCTGTGAACGCACTCAACATCTCCGAGAAGCA...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTGCTTCTCGGAGATGTaGAGTGCGTTCACAGCGAAG +
Preference number: 5 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQCFSEM*SAFTAK
Trigger: CTTCGCTGTGAACGCACTCAACATCTCCGAGAAGCA...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GGACAGTGGCAGGAACAGCGCCGTATGCTTGAGGGTGCTGTGGTCACAGCTCGCAAGGGACATCTTCCTTaGCCATCTTCATTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: GQWQEQRRMLEGAVVTARKGHLP*PSSFFP
Trigger: GGGGAAAAATGAAGATGGCAAAGGAAGATGTCCCTT...GCGAGCTGTGACCACAGCACCCTCAAGCATACGGCGCTGTTCCTGCCACTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAAGGGACATCTTCCTTaGCCATCTTCATTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: GESLGRCRISLQSLLPDRKGHLP*PSSFFP
Trigger: GGGGAAAAATGAAGATGGCAAAGGAAGATGTCCCTT...ACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCGTTCAGCCAAGGGATaGCATATTCTGTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRRSAKG*HILSSE
Trigger: CTCTGAGGACAGAATATGCAATCCCTTGGCTGAACG...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp CGGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCCGTTCAGCCAAGGGATaGCATATTCTGTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RCQGLLPGGYRVSLLQLSRSAKG*HILSSE
Trigger: CTCTGAGGACAGAATATGCAATCCCTTGGCTGAACG...GGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CAA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCCCCCCTTGCACACTCTaGCTATCCGTGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTPPCTL*LSVGSA
Trigger: TGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGGG...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTCCCCCTTGCACACTCTaGCTATCCGTGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLPPCTL*LSVGSA
Trigger: TGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGGG...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCCCGCCCTGGTCCCCCTaGCACACTCTTGCTATCCGT +
Preference number: 5 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVPPWSP*HTLAIR
Trigger: ACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCGG...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCACGAACTGCAGCGTCTaGTCTGGCAAATTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: LCSEQAWARQFTVVGDQATNCSV*SGKFKE
Trigger: CTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCGT...GGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp CGGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCACGAACTGCAGCGTCTaGTCTGGCAAATTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: RCQGLLPGGYRVSLLQLSTNCSV*SGKFKE
Trigger: CTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCGT...GGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CAA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCACGAACTGCAGCGTCTaGTCTGGCAAATTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTTNCSV*SGKFKE
Trigger: CTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCGT...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGACGAACTGCAGCGTCTaGTCTGGCAAATTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRTNCSV*SGKFKE
Trigger: CTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCGT...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTTGGGCCTGTTGTCTATaGGGGTTACCGAGTCATCCA +
Preference number: 5 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPWACCL*GLPSHP
Trigger: TGGATGACTCGGTAACCCCAATAGACAACAGGCCCA...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp TCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGAATTAACCTGGGCCTGTaGTCTATTGGGGTTACCGAG +
Preference number: 5 (lower is better)
Translates to: SAHQVVAQWLCSEQAWARINLGL*SIGVTE
Trigger: CTCGGTAACCCCAATAGACAACAGGCCCAGGTTAAT...TCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp CATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTTAGGGTCTTGTTGGGGTaGAGGTCGGTGTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: HASWSSLAKSAGRRSSRLRVLLG*RSVSGT
Trigger: AGTCCCTGACACCGACCTCAACCCCAACAAGACCCT...AAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGGAGAAGCAGCAGGCTaGATTTGCATCAATAAAAGC +
Preference number: 5 (lower is better)
Translates to: HCPASAHQVVAQWLCSEQGEAAG*ICINKS
Trigger: GCTTTTATTGATGCAAATCAAGCCTGCTGCTTCTCC...CTGCTCTGAACACAGCCATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACACACCCTGCTCTTTCTGCATCAAGTTaGGTGTCCTGTTGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: SLQSLLPDRRGGTCTHPALSASS*VSCCRS
Trigger: GCTTCTGCAACAGGACACCAAACTTGATGCAGAAAG...AGCAGGGTGTGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCCCCATAAGACCGTACTaGGGGCTCTCGGCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTPIRPY*GLSAFN
Trigger: GTTGAAGGCCGAGAGCCCCAAGTACGGTCTTATGGG...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GAACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCGTGCTTGGCGACCACTaGGAAGACCGTTTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: EQEKHKTLHAWTRRSRGTVLGDH*EDRFVL
Trigger: AAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCAC...GGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAACTTCCAGGACGTGCTaGGCGACCACTTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRTSRTC*ATTWKT
Trigger: GGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGT...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTACTTCCAGGACGTGCTaGGCGACCACTTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLTSRTC*ATTWKT
Trigger: GGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGT...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGGGCCACTACGGGCTTaGGAACCACCTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLGPLRA*EPPSLP
Trigger: TGGAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCCC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTGGGGGAGAAGACCCTaGGGTGGATGCCACCAACAC +
Preference number: 5 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCWGRRP*GGCHQH
Trigger: GTGTTGGTGGCATCCACCCAAGGGTCTTCTCCCCCA...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCAGACATGAGGAGGCGGTaGTCGCTGGACTTAAGATAC +
Preference number: 5 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPDMRRR*SLDLRY
Trigger: GTATCTTAAGTCCAGCGACAACCGCCTCCTCATGTC...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AAGAGGACTGAGGTTGTCTGCACGATGCGGGCTAACCTACGCAGCACTGCACGAGACATGAGGAGGCGGTaGTCGCTGGACTTAAGATAC +
Preference number: 5 (lower is better)
Translates to: KRTEVVCTMRANLRSTARDMRRR*SLDLRY
Trigger: GTATCTTAAGTCCAGCGACAACCGCCTCCTCATGTC...TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGCTGGTGATGGTGTCTaGCTCGGTCTCATAGCCGGT +
Preference number: 5 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTAGDGV*LGLIAG
Trigger: ACCGGCTATGAGACCGAGCAAGACACCATCACCAGC...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGGCTGTGGGCTCCAGATaGTACCGCACTCCCATCTCA +
Preference number: 5 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLAVGSR*YRTPIS
Trigger: TGAGATGGGAGTGCGGTACAATCTGGAGCCCACAGC...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCAGGCTTGGGCCTGTCTCTCCAATaGAGACACTGGGGTGGGCTT +
Preference number: 5 (lower is better)
Translates to: MHLGVPWLSLQGGEAAGLGLSLQ*RHWGGL
Trigger: AAGCCCACCCCAGTGTCTCAATTGGAGAGACAGGCC...CAAGCCTGCTGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS-3UTR CAA 90 bp TGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATCGTCTTCAGAAATCTTaGCAAACCATCAGTGTCGTC +
Preference number: 5 (lower is better)
Translates to: WVPGFSTVPPLPIRWWPNRLQKS*QTISVV
Trigger: GACGACACTGATGGTTTGCAAAGATTTCTGAAGACG...ATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAATGGCTGTCACTCCTTaGCAGTGTGGGAGATCAGTC +
Preference number: 5 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGMAVTP*QCGRSV
Trigger: GACTGATCTCCCACACTGCAAAGGAGTGACAGCCAT...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS TCA 90 bp CTTCTGAGACCTTCCAATACACCTCATGCTGCTTCTCGGAGATGTTaGGTGCGTTCACAGCGAAGACCGCCTCCCGGGCACCTATGTACA +
Preference number: 5 (lower is better)
Translates to: LLRPSNTPHAASRRC*VRSQRRPPPGHLCT
Trigger: TGTACATAGGTGCCCGGGAGGCGGTCTTCGCTGTGAACGCACTCAACATCTCCGAGAAGCAGCATGAGGTGTATTGGAAGGTCTCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420681.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS TCA 90 bp GTGGATGCCACCAACACTTTGGTGGCAATCCTACTACCTTCTGTCTaGACAACTGACAAGGTGGGGGCCACTACGGGCTTTGGAACCACC +
Preference number: 5 (lower is better)
Translates to: VDATNTLVAILLPSV*TTDKVGATTGFGTT
Trigger: GGTGGTTCCAAAGCCCGTAGTGGCCCCCACCTTGTCAGTTGTTCAGACAGAAGGTAGTAGGATTGCCACCAAAGTGTTGGTGGCATCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 90 bp CTCAGTCTCCATCTGCGTCTGAGTCAGCGAACTTCAGCTCACACTTaGCGTCAAAGGGCTTGTCCCTGGCAGAAAGGTCGTCGATCCTCT +
Preference number: 5 (lower is better)
Translates to: LSLHLRLSQRTSAHT*RQRACPWQKGRRSS
Trigger: AGAGGATCGACGACCTTTCTGCCAGGGACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGTTCGCTGACTCAGACGCAGATGGAGACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 90 bp AGCAGGGTCCCCAGGTCAAAGCTCTGTGGGCCTTTATGGCACCCTTaGTGCCCACTGGCCACCTTTCTCAATGGAAAGCCAATAAAACCC +
Preference number: 5 (lower is better)
Translates to: SRVPRSKLCGPLWHP*CPLATFLNGKPIKP
Trigger: GGGTTTTATTGGCTTTCCATTGAGAAAGGTGGCCAGTGGGCATCAAGGGTGCCATAAAGGCCCACAGAGCTTTGACCTGGGGACCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS TCA 90 bp GCCCGAGTTAGAGCCAGCATAGACAAACCTGTTGCCCTGCGTGTATaGGACAGAGAAGAACTAGCATCAGGCAAGCAGGCATCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: ARVRASIDKPVALRV*DREELASGKQASRS
Trigger: GCTCCTGGATGCCTGCTTGCCTGATGCTAGTTCTTCTCTGTCTCATACACGCAGGGCAACAGGTTTGTCTATGCTGGCTCTAACTCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS GCA 90 bp GAAAGTAGAGAGGCCAGTTACTTCACACACACTCAGACCATCTGTTaGAACCTGCCAGGGTGGAGCCTGGCTGGCCTCAGCTTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: ESREASYFTHTQTIC*NLPGWSLAGLSLSD
Trigger: ATCAGACAAGCTGAGGCCAGCCAGGCTCCACCCTGGCAGGTTGCAACAGATGGTCTGAGTGTGTGTGAAGTAACTGGCCTCTCTACTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS GCA 90 bp GCACCAGTGTGTGGGAAGCAGCCAGAGTGTACCTTCAGGGGACATTaGAGTAAGGAGGAGAGGTACTCAGAACCAGAGGCAAACAAGGCA +
Preference number: 5 (lower is better)
Translates to: APVCGKQPECTFRGH*SKEERYSEPEANKA
Trigger: TGCCTTGTTTGCCTCTGGTTCTGAGTACCTCTCCTCCTTACTGCAATGTCCCCTGAAGGTACACTCTGGCTGCTTCCCACACACTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS CCA 90 bp GTCATCCATCAAAGGGTGGTCTTTAACGAACTGCAGCGTCTTGTCTaGCAAATTCAAGGAGCTGGTGTAGTTGGCGGCCCGTGCCTCGCT +
Preference number: 5 (lower is better)
Translates to: VIHQRVVFNELQRLV*QIQGAGVVGGPCLA
Trigger: AGCGAGGCACGGGCCGCCAACTACACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCACCCTTTGATGGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000474258.1
ENST00000537934.5
CDS CCA 90 bp GGCTTTGGAACCACCTTCACTTCCAGGACGTGCTTGGCGACCACTTaGAAGACCGTTTTGTTCTTAACCCTCTCCTCTGACAGGCACTGG +
Preference number: 5 (lower is better)
Translates to: GFGTTFTSRTCLATT*KTVLFLTLSSDRHW
Trigger: CCAGTGCCTGTCAGAGGAGAGGGTTAAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGTGAAGGTGGTTCCAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 90 bp CTGGGGTTGGGGGAGAAGACCCTTGGGTGGATGCCACCAACACTTTaGTGGCAATCCTACTACCTTCTGTCTGAACAACTGACAAGGTGG +
Preference number: 5 (lower is better)
Translates to: LGLGEKTLGWMPPTL*WQSYYLLSEQLTRW
Trigger: CCACCTTGTCAGTTGTTCAGACAGAAGGTAGTAGGATTGCCACCAAAGTGTTGGTGGCATCCACCCAAGGGTCTTCTCCCCCAACCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 90 bp CGGTTGTCGCTGGACTTAAGATACATGGTTTTCTCCGAGTGGAGCTaGGGGACCGTGTTGATGACGATCTTTGGTTCGCAGGATGTGCCG +
Preference number: 5 (lower is better)
Translates to: RLSLDLRYMVFSEWS*GTVLMTIFGSQDVP
Trigger: CGGCACATCCTGCGAACCAAAGATCGTCATCAACACGGTCCCCCAGCTCCACTCGGAGAAAACCATGTATCTTAAGTCCAGCGACAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 90 bp AGATGTGTTCAGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTCGCTaGCTCGGGAGTGAAGCTGCAGACCTTCACGGTGAGTGTTACAGC +
Preference number: 5 (lower is better)
Translates to: RCVQSFFLLVGSWSR*LGSEAADLHGECYS
Trigger: GCTGTAACACTCACCGTGAAGGTCTGCAGCTTCACTCCCGAGCCAGCGAGACCACGAACCCACCAGAAGGAAGAAACTCTGAACACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429836.5
ENST00000438547.6
ENST00000537934.5
ENST00000540475.5
CDS CCA 90 bp CTGATGTTCAGATGTGTTCAGAGTTTCTTCCTTCTGGTGGGTTCGTaGTCTCGCTGGCTCGGGAGTGAAGCTGCAGACCTTCACGGTGAG +
Preference number: 5 (lower is better)
Translates to: LMFRCVQSFFLLVGS*SRWLGSEAADLHGE
Trigger: CTCACCGTGAAGGTCTGCAGCTTCACTCCCGAGCCAGCGAGACCACGAACCCACCAGAAGGAAGAAACTCTGAACACATCTGAACATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429836.5
ENST00000438547.6
ENST00000537934.5
ENST00000540475.5
CDS CCA 90 bp CCAAACAGAACGGTGTCCACCGTGGTGTGGCAAGGTTCCATAGCATaGCTGTCACTCCTTTGCAGTGTGGGAGATCAGTCTCAAGACAGG +
Preference number: 5 (lower is better)
Translates to: PNRTVSTVVWQGSIA*LSLLCSVGDQSQDR
Trigger: CCTGTCTTGAGACTGATCTCCCACACTGCAAAGGAGTGACAGCCATGCTATGGAACCTTGCCACACCACGGTGGACACCGTTCTGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS CCA 90 bp TGGATGGCTGGTTTTCAGCCAAACAGAACGGTGTCCACCGTGGTGTaGCAAGGTTCCATAGCATGGCTGTCACTCCTTTGCAGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: WMAGFQPNRTVSTVV*QGSIAWLSLLCSVG
Trigger: TCCCACACTGCAAAGGAGTGACAGCCATGCTATGGAACCTTGCCACACCACGGTGGACACCGTTCTGTTTGGCTGAAAACCAGCCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS CCA 90 bp CTTGCTCGTGAAGTCTGTTGGCCCTCCAGGGGCTGCTGGCCATGTTaGGACAGGCTCAACTCCCTGTTCTTACTGAAGGAAAAACAAGCA +
Preference number: 5 (lower is better)
Translates to: LAREVCWPSRGCWPC*DRLNSLFLLKEKQA
Trigger: TGCTTGTTTTTCCTTCAGTAAGAACAGGGAGTTGAGCCTGTCCCAACATGGCCAGCAGCCCCTGGAGGGCCAACAGACTTCACGAGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS-3UTR CAA 90 bp GGATGGGCAAGCACACACCTCACAGGCAGCTGGGCCTCTCGACTTGGGGTGCGGTGTATCTTATGCCTCTaGAAACTTTCCAGTCATTTC +
Preference number: 5 (lower is better)
Translates to: GWASTHLTGSWASRLGVRCILCL*KLSSHF
Trigger: GAAATGACTGGAAAGTTTCAAGAGGCATAAGATACA...CCGCACCCCAAGTCGAGAGGCCCAGCTGCCTGTGAGGTGTGTGCTTGCCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp CGGTGTCAGGGACTCCTTCCTGGTGGCTACAGGGTGTCCTTGCTACAGCTTTCCAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: RCQGLLPGGYRVSLLQLSNVKAH*ILLQGL
Trigger: GAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATT...GGAAAGCTGTAGCAAGGACACCCTGTAGCCACCAGGAAGGAGTCCCTGACACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CAA 90 bp GGGGCACTCTGTCAAGGGGAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCAAGGGACATCTTCCTTaGCCATCTTCATTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: GALCQGESLGRCRISLQSKGHLP*PSSFFP
Trigger: GGGGAAAAATGAAGATGGCAAAGGAAGATGTCCCTT...GCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTCCCCTTGACAGAGTGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AAGAGGACTGAGGTTGTCTGCACGATGCGGGCTAACCTACGCAGCACTGCACGACGTTCAGCCAAGGGATaGCATATTCTGTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: KRTEVVCTMRANLRSTARRSAKG*HILSSE
Trigger: CTCTGAGGACAGAATATGCAATCCCTTGGCTGAACG...TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AACAGGAGAAACACAAAACTCTCCACGCCTGGACACGTCGCAGCCGAGGCACCACGTTCAGCCAAGGGATaGCATATTCTGTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: NRRNTKLSTPGHVAAEAPRSAKG*HILSSE
Trigger: CTCTGAGGACAGAATATGCAATCCCTTGGCTGAACG...TGGTGCCTCGGCTGCGACGTGTCCAGGCGTGGAGAGTTTTGTGTTTCTCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCGCCCTGGTCCCCCTaGCACACTCTTGCTATCCGT +
Preference number: 5 (lower is better)
Translates to: CTHPAVLVHEQLSKPVSHPPWSP*HTLAIR
Trigger: ACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCGG...ATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTACCCGCCCTGGTCCCCCTaGCACACTCTTGCTATCCGT +
Preference number: 5 (lower is better)
Translates to: LSKPVSHPGYLLVPDRTYPPWSP*HTLAIR
Trigger: ACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCGG...GTAAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTACGAACTGCAGCGTCTaGTCTGGCAAATTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: QQRSSHLSPTTERAQELRTNCSV*SGKFKE
Trigger: CTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCGT...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCAACGAACTGCAGCGTCTaGTCTGGCAAATTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: EAEGMLFSANRGPATFPPTNCSV*SGKFKE
Trigger: CTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCGT...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TCCAGCATCTTCAGGACACCTGTTGTGATGGATCCTGAAGGAATTAGCAGGCGAAGTGGCAGCAGGGTCTaGTTGGGGTTGAGGTCGGTG +
Preference number: 5 (lower is better)
Translates to: SSIFRTPVVMDPEGISRRSGSRV*LGLRSV
Trigger: CACCGACCTCAACCCCAACAAGACCCTGCTGCCACT...TCGCCTGCTAATTCCTTCAGGATCCATCACAACAGGTGTCCTGAAGATGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGTGTTCAGAGCAGGCTaGGGCAAGACAGTTCACAGT +
Preference number: 5 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCVFRAG*GKTVHS
Trigger: ACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACAC...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp CACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTGCCATGCTAACCCTGTaGGCTATTAGGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: HPAVLVHEQLSKPVSHPGAMLTL*AIRGWG
Trigger: CCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGC...ACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGGCCATGCTAACCCTGTaGGCTATTAGGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: FSCPSHASWSSLAKSAGRAMLTL*AIRGWG
Trigger: CCCCCACCCCCTAATAGCCAACAGGGTTAGCATGGC...CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTCCGTGTGCTTGGCGACCACTaGGAAGACCGTTTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: QQRSSHLSPTTERAQELRVLGDH*EDRFVL
Trigger: AAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCAC...ACGGAGTTCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGAGCTGGGGGACCGTGTaGATGACGATCTTTGGTTCG +
Preference number: 5 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLSWGTV*MTIFGS
Trigger: CGAACCAAAGATCGTCATCAACACGGTCCCCCAGCT...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAAGCTGGGGGACCGTGTaGATGACGATCTTTGGTTCG +
Preference number: 5 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRSWGTV*MTIFGS
Trigger: CGAACCAAAGATCGTCATCAACACGGTCCCCCAGCT...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCGCTGGTGATGGTGTCTaGCTCGGTCTCATAGCCGGT +
Preference number: 5 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCAGDGV*LGLIAG
Trigger: ACCGGCTATGAGACCGAGCAAGACACCATCACCAGC...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGTTGACGTCAAAGGGCTaGTCCCTGGCAGAAAGGTCG +
Preference number: 5 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLLTSKG*SLAERS
Trigger: CGACCTTTCTGCCAGGGACAAGCCCTTTGACGTCAA...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCAAACTTCAGCTCACACTaGACGTCAAAGGGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: EAEGMLFSANRGPATFPPNFSSH*TSKGLS
Trigger: GGACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGTT...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCACAAGAGGACTGAGGTaGTCTGCACGATGCGGGCTA +
Preference number: 5 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTTRGLR*SARCGL
Trigger: TAGCCCGCATCGTGCAGACAACCTCAGTCCTCTTGT...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCAGAATGGTTCTGGGCCTaGGAACAGCATCCCACCCCA +
Preference number: 5 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEAEWFWA*EQHPTP
Trigger: TGGGGTGGGATGCTGTTCCAAGGCCCAGAACCATTC...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS GCA 90 bp AACAGTGGGCATGGGAATCACTTACCAGGTCTCATCACAGCAACCTaGACCTTCGAAGTCTTGTTCCCTGCTGAGGAGAGGACAGAGCAG +
Preference number: 5 (lower is better)
Translates to: NSGHGNHLPGLITAT*TFEVLFPAEERTEQ
Trigger: CTGCTCTGTCCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAGACCTGGTAAGTGATTCCCATGCCCACTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CCA 90 bp CTTTGGTGGCAATCCTACTACCTTCTGTCTGAACAACTGACAAGGTaGGGGCCACTACGGGCTTTGGAACCACCTTCACTTCCAGGACGT +
Preference number: 5 (lower is better)
Translates to: LWWQSYYLLSEQLTR*GPLRALEPPSLPGR
Trigger: ACGTCCTGGAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCCCCCACCTTGTCAGTTGTTCAGACAGAAGGTAGTAGGATTGCCACCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 90 bp AGGAGGCGGTTGTCGCTGGACTTAAGATACATGGTTTTCTCCGAGTaGAGCTGGGGGACCGTGTTGATGACGATCTTTGGTTCGCAGGAT +
Preference number: 5 (lower is better)
Translates to: RRRLSLDLRYMVFSE*SWGTVLMTIFGSQD
Trigger: ATCCTGCGAACCAAAGATCGTCATCAACACGGTCCCCCAGCTCCACTCGGAGAAAACCATGTATCTTAAGTCCAGCGACAACCGCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 90 bp AAAGCGAATGTCTGCAGGACCTTCTTTGAAGACAGCAGCAGGGTCTaGACTGGCTCAAAGTCCTGGAAGAGCTGGGTCTCCTCGATGATG +
Preference number: 5 (lower is better)
Translates to: KANVCRTFFEDSSRV*TGSKSWKSWVSSMM
Trigger: CATCATCGAGGAGACCCAGCTCTTCCAGGACTTTGAGCCAGTCCAGACCCTGCTGCTGTCTTCAAAGAAGGTCCTGCAGACATTCGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000537934.5
CDS-3UTR CAA 90 bp GTAGTGGGCAGCTCAGTGAGGCTGGATAGAAAGTCTGGGCAGGCAGTGGGTAAGAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: VVGSSVRLDRKSGQAVGKNVKAH*ILLQGL
Trigger: GAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATT...CTTACCCACTGCCTGCCCAGACTTTCTATCCAGCCTCACTGAGCTGCCCACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCTGCTTCTCGGAGATGTaGAGTGCGTTCACAGCGAAG +
Preference number: 5 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTCFSEM*SAFTAK
Trigger: CTTCGCTGTGAACGCACTCAACATCTCCGAGAAGCA...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGATGCTTCTCGGAGATGTaGAGTGCGTTCACAGCGAAG +
Preference number: 5 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRCFSEM*SAFTAK
Trigger: CTTCGCTGTGAACGCACTCAACATCTCCGAGAAGCA...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AAGAGGACTGAGGTTGTCTGCACGATGCGGGCTAACCTACGCAGCACTGCACGAGGCACTCTGTCTGTTTaGATTTCCCCTTTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: KRTEVVCTMRANLRSTARGTLSV*ISPFLH
Trigger: GTGCAGAAAAGGGGAAATCAAAACAGACAGAGTGCC...TCGTGCAGTGCTGCGTAGGTTAGCCCGCATCGTGCAGACAACCTCAGTCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGGGCACTCTGTCTGTTTaGATTTCCCCTTTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQGTLSV*ISPFLH
Trigger: GTGCAGAAAAGGGGAAATCAAAACAGACAGAGTGCC...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGGGCACTCTGTCTGTTTaGATTTCCCCTTTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGGTLSV*ISPFLH
Trigger: GTGCAGAAAAGGGGAAATCAAAACAGACAGAGTGCC...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTCGTTCAGCCAAGGGATaGCATATTCTGTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCRSAKG*HILSSE
Trigger: CTCTGAGGACAGAATATGCAATCCCTTGGCTGAACG...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCACATCCCGCAGCACATaGAAGACCAAGCCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCTSRST*KTKPLS
Trigger: AGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATGT...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGATGGGCCTGTTGTCTATaGGGGTTACCGAGTCATCCA +
Preference number: 5 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRWACCL*GLPSHP
Trigger: TGGATGACTCGGTAACCCCAATAGACAACAGGCCCA...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAACCTGTTGCCCTTCTTaGAAGACAGCAGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRTCCPS*KTAAGS
Trigger: AGACCCTGCTGCTGTCTTCAAAGAAGGGCAACAGGT...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTAGTGGCAGCAGGGTCTaGTTGGGGTTGAGGTCGGTG +
Preference number: 5 (lower is better)
Translates to: THPAVLVHEQLSKPVSHPSGSRV*LGLRSV
Trigger: CACCGACCTCAACCCCAACAAGACCCTGCTGCCACT...AGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGCTTTCTGCATCAAGTTaGGTGTCCTGTTGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: PNGCVQSRLGQDSSQLWGLSASS*VSCCRS
Trigger: GCTTCTGCAACAGGACACCAAACTTGATGCAGAAAG...CCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGCCTATGCAAAACAGGTCATaGTCACACTGCTGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: CVQSRLGQDSSQLWGTRPMQNRS*SHCWED
Trigger: GTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCAT...AGGCCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGACCAGGTGTACTTTCTaGCACAATAAGCCATTCCAG +
Preference number: 5 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRTRCTF*HNKPFQ
Trigger: CTGGAATGGCTTATTGTGCAAGAAAGTACACCTGGT...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420987.5
ENST00000537934.5
CDS-3UTR CAA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAACTTGGAAGACCGTTTaGTTCTTAACCCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPTWKTV*FLTLSS
Trigger: AGAGGAGAGGGTTAAGAACAAAACGGTCTTCCAAGT...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCGGGCCACTACGGGCTTaGGAACCACCTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVGPLRA*EPPSLP
Trigger: TGGAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCCC...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCGCAGTGGGTAAGCAATaGAAGCAAGAAGAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLAVGKQ*KQEEKG
Trigger: TCCTTTCTCTTCTTGCTTCAATTGCTTACCCACTGC...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 90 bp CCTGGGTCCGGTCCACCACGATCTGGGTGTAGTTCACATCTTTCTTaGTTAACCTGGGCCTGTTGTCTATTGGGGTTACCGAGTCATCCA +
Preference number: 5 (lower is better)
Translates to: PGSGPPRSGCSSHLS*LTWACCLLGLPSHP
Trigger: TGGATGACTCGGTAACCCCAATAGACAACAGGCCCAGGTTAATCAAGAAAGATGTGAACTACACCCAGATCGTGGTGGACCGGACCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000474258.1
ENST00000537934.5
CDS TCA 90 bp CACCAACACTTTGGTGGCAATCCTACTACCTTCTGTCTGAACAACTaGCAAGGTGGGGGCCACTACGGGCTTTGGAACCACCTTCACTTC +
Preference number: 5 (lower is better)
Translates to: HQHFGGNPTTFCLNN*QGGGHYGLWNHLHF
Trigger: GAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCCCCCACCTTGTCAGTTGTTCAGACAGAAGGTAGTAGGATTGCCACCAAAGTGTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS GCA 90 bp TGCTGGGAGAAGCTCCCTGGCTCTACTAACGTCTCCTTCAGGCTCTaGTCACGGTCACAGAAATCTGACTTGGGCTTCTTCTTCCCAATT +
Preference number: 5 (lower is better)
Translates to: CWEKLPGSTNVSFRL*SRSQKSDLGFFFPI
Trigger: AATTGGGAAGAAGAAGCCCAAGTCAGATTTCTGTGACCGTGAGCAGAGCCTGAAGGAGACGTTAGTAGAGCCAGGGAGCTTCTCCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 90 bp ACCTGTTCATGCCTGCCACTTACTGGCCAAGCCGCCTTATCAATGTaGGCAGGAATCCTGAACCTCTTCTCTGCAAAGGGACCTGAGAAA +
Preference number: 5 (lower is better)
Translates to: TCSCLPLTGQAALSM*AGILNLFSAKGPEK
Trigger: TTTCTCAGGTCCCTTTGCAGAGAAGAGGTTCAGGATTCCTGCCCACATTGATAAGGCGGCTTGGCCAGTAAGTGGCAGGCATGAACAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS-3UTR CAA 90 bp TGGGTTCCAGGCTTCTCCACTGTCCCGCCTCTGCCCATCAGGTGGTGGCCCAATTGTATCTTATGCCTCTaGAAACTTTCCAGTCATTTC +
Preference number: 5 (lower is better)
Translates to: WVPGFSTVPPLPIRWWPNCILCL*KLSSHF
Trigger: GAAATGACTGGAAAGTTTCAAGAGGCATAAGATACA...ATTGGGCCACCACCTGATGGGCAGAGGCGGGACAGTGGAGAAGCCTGGAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCACGGGCAGGTGTGCTATaGCAGATGCGGCTCAGCGCC +
Preference number: 5 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPRAGVL*QMRLSA
Trigger: GGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCG...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCATGCTTCTCGGAGATGTaGAGTGCGTTCACAGCGAAG +
Preference number: 5 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEACFSEM*SAFTAK
Trigger: CTTCGCTGTGAACGCACTCAACATCTCCGAGAAGCA...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAAAGGGACATCTTCCTTaGCCATCTTCATTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGKGHLP*PSSFFP
Trigger: GGGGAAAAATGAAGATGGCAAAGGAAGATGTCCCTT...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTAAGGGACATCTTCCTTaGCCATCTTCATTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVKGHLP*PSSFFP
Trigger: GGGGAAAAATGAAGATGGCAAAGGAAGATGTCCCTT...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGAAGGGACATCTTCCTTaGCCATCTTCATTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQKGHLP*PSSFFP
Trigger: GGGGAAAAATGAAGATGGCAAAGGAAGATGTCCCTT...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp CACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACCGTTCAGCCAAGGGATaGCATATTCTGTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: HEQLSKPVSHPGYLLVPDRSAKG*HILSSE
Trigger: CTCTGAGGACAGAATATGCAATCCCTTGGCTGAACG...GTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCCCCCTTGCACACTCTaGCTATCCGTGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: PAVLVHEQLSKPVSHPGYPPCTL*LSVGSA
Trigger: TGCTGATCCCACGGATAGCAAGAGTGTGCAAGGGGG...GTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGCCGCCCTGGTCCCCCTaGCACACTCTTGCTATCCGT +
Preference number: 5 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKPPWSP*HTLAIR
Trigger: ACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCGG...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAATTAACCTGGGCCTGTaGTCTATTGGGGTTACCGAG +
Preference number: 5 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRINLGL*SIGVTE
Trigger: CTCGGTAACCCCAATAGACAACAGGCCCAGGTTAAT...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCACCTGTTGCCCTTCTTaGAAGACAGCAGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCTCCPS*KTAAGS
Trigger: AGACCCTGCTGCTGTCTTCAAAGAAGGGCAACAGGT...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGGGAGAAGCAGCAGGCTaGATTTGCATCAATAAAAGC +
Preference number: 5 (lower is better)
Translates to: RWWPNGCVQSRLGQDSSQGEAAG*ICINKS
Trigger: GCTTTTATTGATGCAAATCAAGCCTGCTGCTTCTCC...CTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCAAAGTTTGGTGTCCTGTaGCAGAAGCTGAGCATTGAC +
Preference number: 5 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSKFGVL*QKLSID
Trigger: GTCAATGCTCAGCTTCTGCAACAGGACACCAAACTT...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACTTTCTGCATCAAGTTaGGTGTCCTGTTGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSLSASS*VSCCRS
Trigger: GCTTCTGCAACAGGACACCAAACTTGATGCAGAAAG...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp ATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCACTTTCTGCATCAAGTTaGGTGTCCTGTTGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: MAVFRAGLGKTVHSCGGPLSASS*VSCCRS
Trigger: GCTTCTGCAACAGGACACCAAACTTGATGCAGAAAG...TGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp ATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCAATGCAAAACAGGTCATaGTCACACTGCTGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: IRWWPNGCVQSRLGQDSSMQNRS*SHCWED
Trigger: GTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCAT...TGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp ATATGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTGCTGGGCCTCTCGACTaGGGGTGCGGAGGGGGAACG +
Preference number: 5 (lower is better)
Translates to: IWHQEICIIDLFGFLHQVAGPLD*GCGGGT
Trigger: CGTTCCCCCTCCGCACCCCAAGTCGAGAGGCCCAGC...AACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGACGTCTTCAGAAATCTTaGCTGGTGCTAGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGRLQKS*LVLEMS
Trigger: GCTCATCTCTAGCACCAGCAAAGATTTCTGAAGACG...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTCGTCTTCAGAAATCTTaGCTGGTGCTAGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCRLQKS*LVLEMS
Trigger: GCTCATCTCTAGCACCAGCAAAGATTTCTGAAGACG...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420987.5
ENST00000537934.5
CDS-3UTR CAA 90 bp GAAGCTGAAGGGATGCTCTTCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCAACTTGGAAGACCGTTTaGTTCTTAACCCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: EAEGMLFSANRGPATFPPTWKTV*FLTLSS
Trigger: AGAGGAGAGGGTTAAGAACAAAACGGTCTTCCAAGT...TGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGAAGAGCATCCCTTCAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAGTGCTTGGCGACCACTaGGAAGACCGTTTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRVLGDH*EDRFVL
Trigger: AAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCAC...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GCCAGCCTGGCTCCACTCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCAACTGGGATGCAATGCTaGTCATTTTTCCAAAAGGAC +
Preference number: 5 (lower is better)
Translates to: ASLAPLSSSRLPSLAQNPTGMQC*SFFQKD
Trigger: GTCCTTTTGGAAAAATGACAAGCATTGCATCCCAGT...TGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGAGTGGAGCCAGGCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GACTATGGCTGGTTTTACAATACAACAGCAGAGCTTAGTGGCTGTGACACAGCCCCAGGCTACCTTCCCTaGCTCAAAACCCACCTCGTG +
Preference number: 5 (lower is better)
Translates to: DYGWFYNTTAELSGCDTAPGYLP*LKTHLV
Trigger: CACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGG...GGCTGTGTCACAGCCACTAAGCTCTGCTGTTGTATTGTAAAACCAGCCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CAA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCCCTATATACCACAGGTaGGGAAACTGGGGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCPIYHR*GNWGLW
Trigger: CCAAAGGCCCCAGTTTCCCAACCTGTGGTATATAGG...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS TCA 90 bp ACCATGGCTTCAGAGCTTCGTGGATGTGATTACAAAATATGGAGCTaGTTCTACTCTGCGACAAACCAGGTGCCCTCTGGGCAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: TMASELRGCDYKIWS*FYSATNQVPSGQWP
Trigger: AGGCCACTGCCCAGAGGGCACCTGGTTTGTCGCAGAGTAGAATCAGCTCCATATTTTGTAATCACATCCACGAAGCTCTGAAGCCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS TCA 90 bp GCCAGCTGGTGCCAGGACCACCATGGCTTCAGAGCTTCGTGGATGTaGTTACAAAATATGGAGCTGATTCTACTCTGCGACAAACCAGGT +
Preference number: 5 (lower is better)
Translates to: ASWCQDHHGFRASWM*LQNMELILLCDKPG
Trigger: ACCTGGTTTGTCGCAGAGTAGAATCAGCTCCATATTTTGTAATCACATCCACGAAGCTCTGAAGCCATGGTGGTCCTGGCACCAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 90 bp AAGAATAATTGGATTTCCCAGTTTTCCTACCAGAGGACACAGATGTaGTGTCACTGTCAAGCCTGCCAAGCCCTCGGAACCCACCTGTGC +
Preference number: 5 (lower is better)
Translates to: KNNWISQFSYQRTQM*CHCQACQALGTHLC
Trigger: GCACAGGTGGGTTCCGAGGGCTTGGCAGGCTTGACAGTGACAGCACATCTGTGTCCTCTGGTAGGAAAACTGGGAAATCCAATTATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474258.1
CDS CCA 90 bp ACAAGTACCTCCAGTAGCCTGGTGGTCCCAGATCTGAAAGCCACCTaGTGTGGTGACTTCTCAGAAATCTTCTTACGCTCCCACAAACCT +
Preference number: 5 (lower is better)
Translates to: TSTSSSLVVPDLKAT*CGDFSEIFLRSHKP
Trigger: AGGTTTGTGGGAGCGTAAGAAGATTTCTGAGAAGTCACCACACCAGGTGGCTTTCAGATCTGGGACCACCAGGCTACTGGAGGTACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474258.1
CDS-3UTR CAA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRNVKAH*ILLQGL
Trigger: GAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATT...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAATGTACAAGGTGTCCTaGTCCTCGCTCAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKMYKVS*SSLSSK
Trigger: CTTGCTGCTGAGCGAGGACAAGGACACCTTGTACAT...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GAGTCACTGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGCACATTTTGCTTTTTaGTCTTCTGAGACCTTCCAA +
Preference number: 5 (lower is better)
Translates to: ESLGRCRISLQSLLPDRRAHFAF*SSETFQ
Trigger: TTGGAAGGTCTCAGAAGACAAAAAAGCAAAATGTGC...TCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCAGTGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TGGGACGGTGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAAGCACATTTTGCTTTTTaGTCTTCTGAGACCTTCCAA +
Preference number: 5 (lower is better)
Translates to: WDGVGSAFRACCLTVEEEAHFAF*SSETFQ
Trigger: TTGGAAGGTCTCAGAAGACAAAAAAGCAAAATGTGC...TTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACACCGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGGGCACATTTTGCTTTTTaGTCTTCTGAGACCTTCCAA +
Preference number: 5 (lower is better)
Translates to: GCVQSRLGQDSSQLWGTRAHFAF*SSETFQ
Trigger: TTGGAAGGTCTCAGAAGACAAAAAAGCAAAATGTGC...CCTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAATGGGCCTGTTGTCTATaGGGGTTACCGAGTCATCCA +
Preference number: 5 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKWACCL*GLPSHP
Trigger: TGGATGACTCGGTAACCCCAATAGACAACAGGCCCA...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCAATTAACCTGGGCCTGTaGTCTATTGGGGTTACCGAG +
Preference number: 5 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEAINLGL*SIGVTE
Trigger: CTCGGTAACCCCAATAGACAACAGGCCCAGGTTAAT...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCATTAACCTGGGCCTGTaGTCTATTGGGGTTACCGAG +
Preference number: 5 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCINLGL*SIGVTE
Trigger: CTCGGTAACCCCAATAGACAACAGGCCCAGGTTAAT...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGTCGAGGCTGATGGCTTaGTGCAGAGCTCCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKSRLMA*CRAPRS
Trigger: AGACCGGGGAGCTCTGCACAAAGCCATCAGCCTCGA...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAACCTGTTGCCCTTCTTaGAAGACAGCAGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKTCCPS*KTAAGS
Trigger: AGACCCTGCTGCTGTCTTCAAAGAAGGGCAACAGGT...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTACTGCACCTTCGAAGTCTaGTTCCCTGCTGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LSKPVSHPGYLLVPDRTYCTFEV*FPAEER
Trigger: CCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCA...GTAAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TGTAGGATCAGCCTTCAGAGCCTGCTGCCTGACCGTAGAGGAGGAACCTGCACAAGAAAACACAAAGACTaGACAGATGCACTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: CRISLQSLLPDRRGGTCTRKHKD*TDALPD
Trigger: ATCTGGGAGTGCATCTGTCAAGTCTTTGTGTTTTCT...TGTGCAGGTTCCTCCTCTACGGTCAGGCAGCAGGCTCTGAAGGCTGATCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AGAGGGGATGCAAAACAGGTCATTGTCACACTGCTGGGAAGACACTCAGTATTTGCAAGACTGGCATCCTaGGCTGGATGGGCAAGCACA +
Preference number: 5 (lower is better)
Translates to: RGDAKQVIVTLLGRHSVFARLAS*AGWAST
Trigger: TGTGCTTGCCCATCCAGCCAAGGATGCCAGTCTTGC...AAATACTGAGTGTCTTCCCAGCAGTGTGACAATGACCTGTTTTGCATCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGCGTCTTCAGAAATCTTaGCTGGTGCTAGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLRLQKS*LVLEMS
Trigger: GCTCATCTCTAGCACCAGCAAAGATTTCTGAAGACG...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTCCCATAAGACCGTACTaGGGGCTCTCGGCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSPIRPY*GLSAFN
Trigger: GTTGAAGGCCGAGAGCCCCAAGTACGGTCTTATGGG...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCGTGCTTGGCGACCACTaGGAAGACCGTTTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCVLGDH*EDRFVL
Trigger: AAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCAC...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAACTTCCAGGACGTGCTaGGCGACCACTTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKTSRTC*ATTWKT
Trigger: GGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGT...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAGACATGAGGAGGCGGTaGTCGCTGGACTTAAGATAC +
Preference number: 5 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKDMRRR*SLDLRY
Trigger: GTATCTTAAGTCCAGCGACAACCGCCTCCTCATGTC...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAGCTGGTGATGGTGTCTaGCTCGGTCTCATAGCCGGT +
Preference number: 5 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKAGDGV*LGLIAG
Trigger: ACCGGCTATGAGACCGAGCAAGACACCATCACCAGC...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGCCTTCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCAACTTCAGCTCACACTaGACGTCAAAGGGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: GLLQVLRLTSEHKTGMQCNFSSH*TSKGLS
Trigger: GGACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGTT...GCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TCTCAGCCAACAGAGGTCCAGCCACCTTTCCCCCACTACAGAAAGGGCTCAGGAACTGGGATGCAATGCTaGTCATTTTTCCAAAAGGAC +
Preference number: 5 (lower is better)
Translates to: SQPTEVQPPFPHYRKGSGTGMQC*SFFQKD
Trigger: GTCCTTTTGGAAAAATGACAAGCATTGCATCCCAGT...TCCTGAGCCCTTTCTGTAGTGGGGGAAAGGTGGCTGGACCTCTGTTGGCTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAGCTGTGGGCTCCAGATaGTACCGCACTCCCATCTCA +
Preference number: 5 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKAVGSR*YRTPIS
Trigger: TGAGATGGGAGTGCGGTACAATCTGGAGCCCACAGC...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp GGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTCGTCTTCAGAAATCTTaGCAAACCATCAGTGTCGTC +
Preference number: 5 (lower is better)
Translates to: GGPMAVFRAGLGKTVHSCRLQKS*QTISVV
Trigger: GACGACACTGATGGTTTGCAAAGATTTCTGAAGACG...ACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429836.5
ENST00000455551.6
CDS TCA 90 bp ACAAGGTCAACTAATTCCCACGACGGCCGTGGCCTTTCAAGAGTCTaGAACAAAGGGAAATGTCACAGAGCAGCTGGAACACACACATGC +
Preference number: 5 (lower is better)
Translates to: TRSTNSHDGRGLSRV*NKGKCHRAAGTHTC
Trigger: GCATGTGTGTGTTCCAGCTGCTCTGTGACATTTCCCTTTGTTTCAGACTCTTGAAAGGCCACGGCCGTCGTGGGAATTAGTTGACCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 90 bp CTGGGCCTGTTGTCTATTGGGGTTACCGAGTCATCCATCAAAGGGTaGTCTTTAACGAACTGCAGCGTCTTGTCTGGCAAATTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: LGLLSIGVTESSIKG*SLTNCSVLSGKFKE
Trigger: CTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCACCCTTTGATGGATGACTCGGTAACCCCAATAGACAACAGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000474258.1
ENST00000537934.5
CDS-3UTR CAA 90 bp CTACAGAAAGGGCTCAGGAACTCCGTGCCGCCCGTGGGCCTTCTTCAAGTACTCTGTATCTTATGCCTCTaGAAACTTTCCAGTCATTTC +
Preference number: 5 (lower is better)
Translates to: LQKGLRNSVPPVGLLQVLCILCL*KLSSHF
Trigger: GAAATGACTGGAAAGTTTCAAGAGGCATAAGATACA...GAGTACTTGAAGAAGGCCCACGGGCGGCACGGAGTTCCTGAGCCCTTTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATGTACAAGGTGTCCTaGTCCTCGCTCAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVMYKVS*SSLSSK
Trigger: CTTGCTGCTGAGCGAGGACAAGGACACCTTGTACAT...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CCATCAGGTGGTGGCCCAATGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTGCACATTTTGCTTTTTaGTCTTCTGAGACCTTCCAA +
Preference number: 5 (lower is better)
Translates to: PSGGGPMAVFRAGLGKTVAHFAF*SSETFQ
Trigger: TTGGAAGGTCTCAGAAGACAAAAAAGCAAAATGTGC...AACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCATTGGGCCACCACCTGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GTTCACGAGCAGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGGCACTCTGTCTGTTTaGATTTCCCCTTTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: VHEQLSKPVSHPGYLLVPGTLSV*ISPFLH
Trigger: GTGCAGAAAAGGGGAAATCAAAACAGACAGAGTGCC...TGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCTGCTCGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCATTAACCTGGGCCTGTaGTCTATTGGGGTTACCGAG +
Preference number: 5 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVINLGL*SIGVTE
Trigger: CTCGGTAACCCCAATAGACAACAGGCCCAGGTTAAT...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAATTAACCTGGGCCTGTaGTCTATTGGGGTTACCGAG +
Preference number: 5 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKINLGL*SIGVTE
Trigger: CTCGGTAACCCCAATAGACAACAGGCCCAGGTTAAT...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCATCGAGGCTGATGGCTTaGTGCAGAGCTCCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPSRLMA*CRAPRS
Trigger: AGACCGGGGAGCTCTGCACAAAGCCATCAGCCTCGA...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTGTGTTCAGAGCAGGCTaGGGCAAGACAGTTCACAGT +
Preference number: 5 (lower is better)
Translates to: SYQSLLAILVTCLCQTELVFRAG*GKTVHS
Trigger: ACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACAC...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCAGGTGTACTTTCTaGCACAATAAGCCATTCCAG +
Preference number: 5 (lower is better)
Translates to: QRTKGALVKVPSVSQEVLTRCTF*HNKPFQ
Trigger: CTGGAATGGCTTATTGTGCAAGAAAGTACACCTGGT...CAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTACCAGGTGTACTTTCTaGCACAATAAGCCATTCCAG +
Preference number: 5 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLTRCTF*HNKPFQ
Trigger: CTGGAATGGCTTATTGTGCAAGAAAGTACACCTGGT...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGCCCATAAGACCGTACTaGGGGCTCTCGGCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKPIRPY*GLSAFN
Trigger: GTTGAAGGCCGAGAGCCCCAAGTACGGTCTTATGGG...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTCTATCCGTGGGGACTTaGCTGGTGATGGTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSLSVGT*LVMVSC
Trigger: GCAAGACACCATCACCAGCAAAGTCCCCACGGATAG...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TCAGCTCATCCAGGCTACCTTCCCTTGCTCAAAACCCACCTCGTGGATGTGGGAACTGGGATGCAATGCTaGTCATTTTTCCAAAAGGAC +
Preference number: 5 (lower is better)
Translates to: SAHPGYLPLLKTHLVDVGTGMQC*SFFQKD
Trigger: GTCCTTTTGGAAAAATGACAAGCATTGCATCCCAGT...TCCCACATCCACGAGGTGGGTTTTGAGCAAGGGAAGGTAGCCTGGATGAGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TCGTACCACCCATTCACATCTTCAGGACAGTGGCAGGAACAGCGCCGTATGCTTGCAGTGGGTAAGCAATaGAAGCAAGAAGAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: SYHPFTSSGQWQEQRRMLAVGKQ*KQEEKG
Trigger: TCCTTTCTCTTCTTGCTTCAATTGCTTACCCACTGC...AAGCATACGGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 90 bp ACTTGGAAGACCGTTTTGTTCTTAACCCTCTCCTCTGACAGGCACTaGTACACCCCACTGTCTCCTTCTGACAAGTTGAAGATGAGCAAG +
Preference number: 5 (lower is better)
Translates to: TWKTVLFLTLSSDRH*YTPLSPSDKLKMSK
Trigger: CTTGCTCATCTTCAACTTGTCAGAAGGAGACAGTGGGGTGTACCAGTGCCTGTCAGAGGAGAGGGTTAAGAACAAAACGGTCTTCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
ENST00000486935.2
CDS CCA 90 bp GTCACTCCTTTGCAGTGTGGGAGATCAGTCTCAAGACAGGGATCGTaGGGTGCAGTAGCAGCACCAACAATTAGATCAAGAGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: VTPLQCGRSVSRQGS*GAVAAPTIRSRESE
Trigger: TTCTGATTCTCTTGATCTAATTGTTGGTGCTGCTACTGCACCCCACGATCCCTGTCTTGAGACTGATCTCCCACACTGCAAAGGAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS CCA 90 bp AGTGCCGGCCATGGCCTCTGCTTGACCATGACACCTCGTAAGAATTaGTCTTTAGAAGTTAGATTTGCCCTAGATGTCCATCAACCTCAC +
Preference number: 5 (lower is better)
Translates to: SAGHGLCLTMTPRKN*SLEVRFALDVHQPH
Trigger: GTGAGGTTGATGGACATCTAGGGCAAATCTAACTTCTAAAGACCAATTCTTACGAGGTGTCATGGTCAAGCAGAGGCCATGGCCGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS-3UTR CAA 90 bp TGGCTGTGTTCAGAGCAGGCTTGGGCAAGACAGTTCACAGTTGTGGGGGACCAGTGTATCTTATGCCTCTaGAAACTTTCCAGTCATTTC +
Preference number: 5 (lower is better)
Translates to: WLCSEQAWARQFTVVGDQCILCL*KLSSHF
Trigger: GAAATGACTGGAAAGTTTCAAGAGGCATAAGATACA...CTGGTCCCCCACAACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACACAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCCGTTCAGCCAAGGGATaGCATATTCTGTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVRSAKG*HILSSE
Trigger: CTCTGAGGACAGAATATGCAATCCCTTGGCTGAACG...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ATCCTCATAACTCCATTTCCCAGTAGAACACTCCACATTACGAAAACTTCAAGTCCGCCCTGGTCCCCCTaGCACACTCTTGCTATCCGT +
Preference number: 5 (lower is better)
Translates to: ILITPFPSRTLHITKTSSPPWSP*HTLAIR
Trigger: ACGGATAGCAAGAGTGTGCAAGGGGGACCAGGGCGG...ACTTGAAGTTTTCGTAATGTGGAGTGTTCTACTGGGAAATGGAGTTATGAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAATGGGCCTGTTGTCTATaGGGGTTACCGAGTCATCCA +
Preference number: 5 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKWACCL*GLPSHP
Trigger: TGGATGACTCGGTAACCCCAATAGACAACAGGCCCA...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATATTAACCTGGGCCTGTaGTCTATTGGGGTTACCGAG +
Preference number: 5 (lower is better)
Translates to: CTHPAVLVHEQLSKPVSHINLGL*SIGVTE
Trigger: CTCGGTAACCCCAATAGACAACAGGCCCAGGTTAAT...ATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TGCATCAAGTTTGGTGTCCTGTTGCAGAAGCTGAGCATTGACGGGACAGAGGCAGGAGAAGCAGCAGGCTaGATTTGCATCAATAAAAGC +
Preference number: 5 (lower is better)
Translates to: CIKFGVLLQKLSIDGTEAGEAAG*ICINKS
Trigger: GCTTTTATTGATGCAAATCAAGCCTGCTGCTTCTCC...TGCCTCTGTCCCGTCAATGCTCAGCTTCTGCAACAGGACACCAAACTTGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAAGAAAACACAAAGACTaGACAGATGCACTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: VPVMHLGVPWLSLQGGEARKHKD*TDALPD
Trigger: ATCTGGGAGTGCATCTGTCAAGTCTTTGTGTTTTCT...TGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp ACCTGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCAAGTTTGGTGTCCTGTaGCAGAAGCTGAGCATTGAC +
Preference number: 5 (lower is better)
Translates to: TCTHPAVLVHEQLSKPVSKFGVL*QKLSID
Trigger: GTCAATGCTCAGCTTCTGCAACAGGACACCAAACTT...GCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAAAGACCCGGGCCAGGTaGGATTTTTGGGAGCATTTC +
Preference number: 5 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKKTRAR*DFWEHF
Trigger: GAAATGCTCCCAAAAATCCAACCTGGCCCGGGTCTT...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTAAGACCCGGGCCAGGTaGGATTTTTGGGAGCATTTC +
Preference number: 5 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSKTRAR*DFWEHF
Trigger: GAAATGCTCCCAAAAATCCAACCTGGCCCGGGTCTT...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCAGGGCCACTACGGGCTTaGGAACCACCTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPGPLRA*EPPSLP
Trigger: TGGAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCCC...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCACTGGGATGCAATGCTaGTCATTTTTCCAAAAGGAC +
Preference number: 5 (lower is better)
Translates to: RTKGALVKVPSVSQEVLTTGMQC*SFFQKD
Trigger: GTCCTTTTGGAAAAATGACAAGCATTGCATCCCAGT...GGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS GCA 90 bp CCCCGAATAAAGTTCTCCATCAACCATGACGGATGTGTAGCTGTGTaGTGGGTCAAAGGGACATCTTCCTTTGCCATCTTCATTTTTCCC +
Preference number: 5 (lower is better)
Translates to: PRIKFSINHDGCVAV*WVKGTSSFAIFIFP
Trigger: GGGAAAAATGAAGATGGCAAAGGAAGATGTCCCTTTGACCCAGCACACAGCTACACATCCGTCATGGTTGATGGAGAACTTTATTCGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CCA 90 bp TCTTCTTCCCAATTAGTAGGGCCGAGCGGAATTTCAAGCACTGTCTaGGCAGGTATCCCTTATAGCAGTTGTAGAAAAAGAGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: SSSQLVGPSGISSTV*AGIPYSSCRKRGRG
Trigger: TCCTCTGCCTCTTTTTCTACAACTGCTATAAGGGATACCTGCCCAGACAGTGCTTGAAATTCCGCTCGGCCCTACTAATTGGGAAGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 90 bp ATGGTTTCTTTCCACTATCTGGTGTTAGCAGAGTGGTGGCGCGTCTaGAGTCTGTCCCTTCTGATGTTCAGATGTGTTCAGAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: MVSFHYLVLAEWWRV*SLSLLMFRCVQSFF
Trigger: GAAGAAACTCTGAACACATCTGAACATCAGAAGGGACAGACTCCAGACGCGCCACCACTCTGCTAACACCAGATAGTGGAAAGAAACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429836.5
ENST00000438547.6
ENST00000537934.5
ENST00000540475.5
CDS CCA 90 bp ACATTTCAGCACATGGTTTCTTTCCACTATCTGGTGTTAGCAGAGTaGTGGCGCGTCTGGAGTCTGTCCCTTCTGATGTTCAGATGTGTT +
Preference number: 5 (lower is better)
Translates to: TFQHMVSFHYLVLAE*WRVWSLSLLMFRCV
Trigger: AACACATCTGAACATCAGAAGGGACAGACTCCAGACGCGCCACCACTCTGCTAACACCAGATAGTGGAAAGAAACCATGTGCTGAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429836.5
ENST00000438547.6
ENST00000537934.5
ENST00000540475.5
CDS CCA 90 bp AGGTCACCTCGAGGGAGGCAATGGAACTACTCACGAAAGAATAATTaGATTTCCCAGTTTTCCTACCAGAGGACACAGATGTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: RSPRGRQWNYSRKNN*ISQFSYQRTQMCCH
Trigger: GTGACAGCACATCTGTGTCCTCTGGTAGGAAAACTGGGAAATCCAATTATTCTTTCGTGAGTAGTTCCATTGCCTCCCTCGAGGTGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474258.1
CDS-3UTR CAA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SYQSLLAILVTCLCQTELNVKAH*ILLQGL
Trigger: GAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATT...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
CDS-3UTR CAA 90 bp GTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGAGAAGCAGCACATTTTGCTTTTTaGTCTTCTGAGACCTTCCAA +
Preference number: 5 (lower is better)
Translates to: VPVMHLGVPWLSLQGGEAAHFAF*SSETFQ
Trigger: TTGGAAGGTCTCAGAAGACAAAAAAGCAAAATGTGC...TGCTTCTCCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGGAGGTTCTGACCGAGCACATTTTGCTTTTTaGTCTTCTGAGACCTTCCAA +
Preference number: 5 (lower is better)
Translates to: NQRRPCEGSICLTGGSDRAHFAF*SSETFQ
Trigger: TTGGAAGGTCTCAGAAGACAAAAAAGCAAAATGTGC...TCGGTCAGAACCTCCTGTGAGACAGATGGAACCTTCACAAGGGCGCCTTTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCAACATCCCGCAGCACATaGAAGACCAAGCCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPTSRST*KTKPLS
Trigger: AGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATGT...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGACCTGTTGCCCTTCTTaGAAGACAGCAGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKTCCPS*KTAAGS
Trigger: AGACCCTGCTGCTGTCTTCAAAGAAGGGCAACAGGT...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ACCTGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCGGAGAAGCAGCAGGCTaGATTTGCATCAATAAAAGC +
Preference number: 5 (lower is better)
Translates to: TCTHPAVLVHEQLSKPVSGEAAG*ICINKS
Trigger: GCTTTTATTGATGCAAATCAAGCCTGCTGCTTCTCC...GCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AGCTATCAAAGCCTGTTAGCCATCCTGGTTACCTGCTTGTGCCAGACAGAACTTAAGTTTGGTGTCCTGTaGCAGAAGCTGAGCATTGAC +
Preference number: 5 (lower is better)
Translates to: SYQSLLAILVTCLCQTELKFGVL*QKLSID
Trigger: GTCAATGCTCAGCTTCTGCAACAGGACACCAAACTT...AAGTTCTGTCTGGCACAAGCAGGTAACCAGGATGGCTAACAGGCTTTGATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAACCAGGTGTACTTTCTaGCACAATAAGCCATTCCAG +
Preference number: 5 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKTRCTF*HNKPFQ
Trigger: CTGGAATGGCTTATTGTGCAAGAAAGTACACCTGGT...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCATTGACGTCAAAGGGCTaGTCCCTGGCAGAAAGGTCG +
Preference number: 5 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPLTSKG*SLAERS
Trigger: CGACCTTTCTGCCAGGGACAAGCCCTTTGACGTCAA...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CTCTTCCCGATGGGTATTTACAAAGCGGGGAGATGGAGTGTGAAATTAACCAGTAACTTCAGCTCACACTaGACGTCAAAGGGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: LFPMGIYKAGRWSVKLTSNFSSH*TSKGLS
Trigger: GGACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGTT...ACTGGTTAATTTCACACTCCATCTCCCCGCTTTGTAAATACCCATCGGGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCAACAAGAGGACTGAGGTaGTCTGCACGATGCGGGCTA +
Preference number: 5 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPTRGLR*SARCGL
Trigger: TAGCCCGCATCGTGCAGACAACCTCAGTCCTCTTGT...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TGCTCAAAACCCACCTCGTGGATGTGGGAAGGTCCTCTTCTTCGAGAGAGTAAAGCAGTGGGTAAGCAATaGAAGCAAGAAGAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: CSKPTSWMWEGPLLRESKAVGKQ*KQEEKG
Trigger: TCCTTTCTCTTCTTGCTTCAATTGCTTACCCACTGC...TTTACTCTCTCGAAGAAGAGGACCTTCCCACATCCACGAGGTGGGTTTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 90 bp CGAATAAAGTTCTCCATCAACCATGACGGATGTGTAGCTGTGTGCTaGGTCAAAGGGACATCTTCCTTTGCCATCTTCATTTTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: RIKFSINHDGCVAVC*VKGTSSFAIFIFPQ
Trigger: CTGGGGAAAAATGAAGATGGCAAAGGAAGATGTCCCTTTGACCCAGCACACAGCTACACATCCGTCATGGTTGATGGAGAACTTTATTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS-3UTR CAA 90 bp GACTATGGCTGGTTTTACAATACAACAGCAGAGCTTAGTGGCTGTGACACAGCCAAGGGACATCTTCCTTaGCCATCTTCATTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: DYGWFYNTTAELSGCDTAKGHLP*PSSFFP
Trigger: GGGGAAAAATGAAGATGGCAAAGGAAGATGTCCCTT...GGCTGTGTCACAGCCACTAAGCTCTGCTGTTGTATTGTAAAACCAGCCATAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CAA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGAGGCTACAGGGTGTCCTaGCTACAGCTTTCCCACGCC +
Preference number: 5 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRGYRVS*LQLSHA
Trigger: GGCGTGGGAAAGCTGTAGCAAGGACACCCTGTAGCC...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AAGACTCAGAAATTCATCCTCATAACTCCATTTCCCAGTAGAACACTCCACATTGCAAGACTGGCATCCTaGGCTGGATGGGCAAGCACA +
Preference number: 5 (lower is better)
Translates to: KTQKFILITPFPSRTLHIARLAS*AGWAST
Trigger: TGTGCTTGCCCATCCAGCCAAGGATGCCAGTCTTGC...AATGTGGAGTGTTCTACTGGGAAATGGAGTTATGAGGATGAATTTCTGAGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp TGCACACACCCTGCTGTTTTAGTTCACGAGCAGCTATCAAAGCCTGTTAGCCATACCAGGTGTACTTTCTaGCACAATAAGCCATTCCAG +
Preference number: 5 (lower is better)
Translates to: CTHPAVLVHEQLSKPVSHTRCTF*HNKPFQ
Trigger: CTGGAATGGCTTATTGTGCAAGAAAGTACACCTGGT...ATGGCTAACAGGCTTTGATAGCTGCTCGTGAACTAAAACAGCAGGGTGTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420987.5
CDS-3UTR CAA 90 bp GAGAAAGGAGATGTTCAGAGAACCAAAGGCGCCCTTGTGAAGGTTCCATCTGTCTCACAGAAATCTGACTaGGGCTTCTTCTTCCCAATT +
Preference number: 5 (lower is better)
Translates to: EKGDVQRTKGALVKVPSVSQKSD*GFFFPI
Trigger: AATTGGGAAGAAGAAGCCCAAGTCAGATTTCTGTGA...GACAGATGGAACCTTCACAAGGGCGCCTTTGGTTCTCTGAACATCTCCTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AAGACTCAGAAATTCATCCTCATAACTCCATTTCCCAGTAGAACACTCCACATTACATCCCGCAGCACATaGAAGACCAAGCCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: KTQKFILITPFPSRTLHITSRST*KTKPLS
Trigger: AGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATGT...AATGTGGAGTGTTCTACTGGGAAATGGAGTTATGAGGATGAATTTCTGAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAACTTGGAAGACCGTTTaGTTCTTAACCCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKTWKTV*FLTLSS
Trigger: AGAGGAGAGGGTTAAGAACAAAACGGTCTTCCAAGT...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TCTTCAAGTACTCCGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCTCACAGAAATCTGACTaGGGCTTCTTCTTCCCAATT +
Preference number: 5 (lower is better)
Translates to: SSSTPTDFGTQDWDAMLVSQKSD*GFFFPI
Trigger: AATTGGGAAGAAGAAGCCCAAGTCAGATTTCTGTGA...GACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCGGAGTACTTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp TTTTCTTGTCCCAGTCATGCATCTTGGAGTTCCTTGGCTAAGTCTGCAGGGAGGTGGACTTCCTGCTCTTaGACCTTAATTGCCATTTTT +
Preference number: 5 (lower is better)
Translates to: FSCPSHASWSSLAKSAGRWTSCS*TLIAIF
Trigger: AAAAATGGCAATTAAGGTCAAAGAGCAGGAAGTCCA...CCTCCCTGCAGACTTAGCCAAGGAACTCCAAGATGCATGACTGGGACAAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420101.6
CDS CCA 90 bp GGCATAATTACAAGCACTAAAGAGCTGTTCATCTTCCTTTATTTTTaGATGGCTGGTTTTCAGCCAAACAGAACGGTGTCCACCGTGGTG +
Preference number: 5 (lower is better)
Translates to: GIITSTKELFIFLYF*MAGFQPNRTVSTVV
Trigger: CACCACGGTGGACACCGTTCTGTTTGGCTGAAAACCAGCCATCCAAAAATAAAGGAAGATGAACAGCTCTTTAGTGCTTGTAATTATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS-3UTR CAA 90 bp AAGACTCAGAAATTCATCCTCATAACTCCATTTCCCAGTAGAACACTCCACATTATGTACAAGGTGTCCTaGTCCTCGCTCAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: KTQKFILITPFPSRTLHIMYKVS*SSLSSK
Trigger: CTTGCTGCTGAGCGAGGACAAGGACACCTTGTACAT...AATGTGGAGTGTTCTACTGGGAAATGGAGTTATGAGGATGAATTTCTGAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp ATCCTCATAACTCCATTTCCCAGTAGAACACTCCACATTACGAAAACTTCAAGTTGGGCCTGTTGTCTATaGGGGTTACCGAGTCATCCA +
Preference number: 5 (lower is better)
Translates to: ILITPFPSRTLHITKTSSWACCL*GLPSHP
Trigger: TGGATGACTCGGTAACCCCAATAGACAACAGGCCCA...ACTTGAAGTTTTCGTAATGTGGAGTGTTCTACTGGGAAATGGAGTTATGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp ATATGGCACCAGGAGATTTGCATAATTGACCTATTTGGCTTTCTGCATCAAGTTGTGTTCAGAGCAGGCTaGGGCAAGACAGTTCACAGT +
Preference number: 5 (lower is better)
Translates to: IWHQEICIIDLFGFLHQVVFRAG*GKTVHS
Trigger: ACTGTGAACTGTCTTGCCCAAGCCTGCTCTGAACAC...AACTTGATGCAGAAAGCCAAATAGGTCAATTATGCAAATCTCCTGGTGCCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AATTTGTCCAGCTCCAGAAAGAGGGGATGCAAAACAGGTCATTGTCACACTGCTAGAAAACACAAAGACTaGACAGATGCACTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: NLSSSRKRGCKTGHCHTARKHKD*TDALPD
Trigger: ATCTGGGAGTGCATCTGTCAAGTCTTTGTGTTTTCT...AGCAGTGTGACAATGACCTGTTTTGCATCCCCTCTTTCTGGAGCTGGACAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTAGCTGGGGGACCGTGTaGATGACGATCTTTGGTTCG +
Preference number: 5 (lower is better)
Translates to: HLAKGSLSLRILSNVSRISWGTV*MTIFGS
Trigger: CGAACCAAAGATCGTCATCAACACGGTCCCCCAGCT...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTTTGACGTCAAAGGGCTaGTCCCTGGCAGAAAGGTCG +
Preference number: 5 (lower is better)
Translates to: HLAKGSLSLRILSNVSRILTSKG*SLAERS
Trigger: CGACCTTTCTGCCAGGGACAAGCCCTTTGACGTCAA...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ACTGTCCACACACGCGCACAAACATCCAGAGTTTATTGCTCTTCACCATGGAAAGCACATTTTGCTTTTTaGTCTTCTGAGACCTTCCAA +
Preference number: 5 (lower is better)
Translates to: TVHTRAQTSRVYCSSPWKAHFAF*SSETFQ
Trigger: TTGGAAGGTCTCAGAAGACAAAAAAGCAAAATGTGC...TTTCCATGGTGAAGAGCAATAAACTCTGGATGTTTGTGCGCGTGTGTGGACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATGGCACCAGGAATTAACCTGGGCCTGTaGTCTATTGGGGTTACCGAG +
Preference number: 5 (lower is better)
Translates to: QNTHETHSIVKKFNMAPGINLGL*SIGVTE
Trigger: CTCGGTAACCCCAATAGACAACAGGCCCAGGTTAAT...TCCTGGTGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGACGTTCAGCCAAGGGATaGCATATTCTGTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRRSAKG*HILSSE
Trigger: CTCTGAGGACAGAATATGCAATCCCTTGGCTGAACG...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGAACGAACTGCAGCGTCTaGTCTGGCAAATTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRTNCSV*SGKFKE
Trigger: CTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCGT...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CGACTGACTTCGGAACACAAGACTGGGATGCAATGCTTGTCATTTTTCCAAAAGTGTATCTTATGCCTCTaGAAACTTTCCAGTCATTTC +
Preference number: 5 (lower is better)
Translates to: RLTSEHKTGMQCLSFFQKCILCL*KLSSHF
Trigger: GAAATGACTGGAAAGTTTCAAGAGGCATAAGATACA...CTTTTGGAAAAATGACAAGCATTGCATCCCAGTCTTGTGTTCCGAAGTCAGTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356444.6
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: HLAKGSLSLRILSNVSRINVKAH*ILLQGL
Trigger: GAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATT...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp ATTAAGTGGAAGAAAAGGTTCGTGCCAATCTGGACAACAGGCGATAAGTTACCAGCACATTTTGCTTTTTaGTCTTCTGAGACCTTCCAA +
Preference number: 5 (lower is better)
Translates to: IKWKKRFVPIWTTGDKLPAHFAF*SSETFQ
Trigger: TTGGAAGGTCTCAGAAGACAAAAAAGCAAAATGTGC...TGGTAACTTATCGCCTGTTGTCCAGATTGGCACGAACCTTTTCTTCCACTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGAGGCACTCTGTCTGTTTaGATTTCCCCTTTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRGTLSV*ISPFLH
Trigger: GTGCAGAAAAGGGGAAATCAAAACAGACAGAGTGCC...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTGGCACTCTGTCTGTTTaGATTTCCCCTTTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: HLAKGSLSLRILSNVSRIGTLSV*ISPFLH
Trigger: GTGCAGAAAAGGGGAAATCAAAACAGACAGAGTGCC...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS-3UTR CAA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGAAAGTTTGGTGTCCTGTaGCAGAAGCTGAGCATTGAC +
Preference number: 5 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRKFGVL*QKLSID
Trigger: GTCAATGCTCAGCTTCTGCAACAGGACACCAAACTT...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CCATCGTCAAGAAATTTAATATGGCACCAGGAGATTTGCATAATTGACCTATTTGAAGACACTCAGTATTaGCTAGGATCACCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: PSSRNLIWHQEICIIDLFEDTQY*LGSPEG
Trigger: CCCCTCTGGTGATCCTAGCAAATACTGAGTGTCTTC...AAATAGGTCAATTATGCAAATCTCCTGGTGCCATATTAAATTTCTTGACGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp AAAATAGAGCCCAGTATTCTGAGGTTAGTGAAGAAAACACAAAGACTTGACAGAAAGGGACATCTTCCTTaGCCATCTTCATTTTTCCCC +
Preference number: 5 (lower is better)
Translates to: KIEPSILRLVKKTQRLDRKGHLP*PSSFFP
Trigger: GGGGAAAAATGAAGATGGCAAAGGAAGATGTCCCTT...TCTGTCAAGTCTTTGTGTTTTCTTCACTAACCTCAGAATACTGGGCTCTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339861.8
ENST00000420987.5
ENST00000455551.6
CDS-3UTR CAA 90 bp CAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATGGCACCAGGAAGAAAACACAAAGACTaGACAGATGCACTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: QNTHETHSIVKKFNMAPGRKHKD*TDALPD
Trigger: ATCTGGGAGTGCATCTGTCAAGTCTTTGTGTTTTCT...TCCTGGTGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339861.8
ENST00000420987.5
CDS-3UTR CAA 90 bp GTAGAACAAAACACTCATGAGACTCATTCCATCGTCAAGAAATTTAATATGGCACGTCTTCAGAAATCTTaGCTGGTGCTAGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: VEQNTHETHSIVKKFNMARLQKS*LVLEMS
Trigger: GCTCATCTCTAGCACCAGCAAAGATTTCTGAAGACG...TGCCATATTAAATTTCTTGACGATGGAATGAGTCTCATGAGTGTTTTGTTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420987.5
CDS-3UTR CAA 90 bp CATTTAGCAAAAGGAAGTTTATCCCTGAGAATCTTAAGCAACGTAAGCCGTATTCATCTTCCTTTATTTTaGGATGGCTGGTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: HLAKGSLSLRILSNVSRIHLPLF*DGWFSA
Trigger: GGCTGAAAACCAGCCATCCAAAAATAAAGGAAGATG...AATACGGCTTACGTTGCTTAAGATTCTCAGGGATAAACTTCCTTTTGCTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS GCA 72 bp GGGTCCCGCGCCAGCACACAGTCCTCGCAGGTGCCGTaGTTCCCACAGAAGGCCAGCGGGGCCTGGACCACG +
Preference number: 6 (lower is better)
Translates to: GSRASTQSSQVP*FPQKASGAWTT
Trigger: CGTGGTCCAGGCCCCGCTGGCCTTCTGTGGGAAGCACGGCACCTGCGAGGACTGTGTGCTGGCGCGGGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000486935.2
ENST00000544513.1
CDS GCA 72 bp CGGCAGCAGGTGGCCGGGCAGGTGTGCTATTGCAGATaGGGCTCAGCGCCCCAGGACCAGGGCCAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: RQQVAGQVCYCR*GSAPQDQGQQH
Trigger: GTGCTGCTGGCCCTGGTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCGGCCACCTGCTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000418828.1
ENST00000420670.5
ENST00000420681.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000433650.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
ENST00000540475.5
CDS GCA 72 bp GGCTCACGGCAGCAGGTGGCCGGGCAGGTGTGCTATTaGAGATGCGGCTCAGCGCCCCAGGACCAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: GSRQQVAGQVCY*RCGSAPQDQGQ
Trigger: CTGGCCCTGGTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCGGCCACCTGCTGCCGTGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000418828.1
ENST00000420670.5
ENST00000420681.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000433650.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
ENST00000540475.5
CDS CCA 72 bp TCAGTCCCTGGGACTGCCCTGGAGGTGGCTTCCCCATaGCCAGCGGGAGCCTTGGCCTTGGCCCGTCCTGTG +
Preference number: 6 (lower is better)
Translates to: SVPGTALEVASP*PAGALALARPV
Trigger: CACAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGGCAGTCCCAGGGACTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CAA 90 bp CAGCAGCAAAGGCTCACGGCAGCAGGTGGCCGGGCAGGTGTGCTATaGCAGATGCGGCTCAGCGCCCCAGGACCAGGGCCAGCAGCACAG +
Preference number: 6 (lower is better)
Translates to: QQQRLTAAGGRAGVL*QMRLSAPGPGPAAQ
Trigger: CTGTGCTGCTGGCCCTGGTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCGGCCACCTGCTGCCGTGAGCCTTTGCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000418828.1
ENST00000420670.5
ENST00000420681.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000433650.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
ENST00000540475.5
CDS GCA 72 bp CGCCTGGACACGTCGCAGCCGAGGCACCAGCGGGGATaGACAGCCGGCCTCAGTCTCCATCTGCGTCTGAGT +
Preference number: 6 (lower is better)
Translates to: RLDTSQPRHQRG*TAGLSLHLRLS
Trigger: ACTCAGACGCAGATGGAGACTGAGGCCGGCTGTGCATCCCCGCTGGTGCCTCGGCTGCGACGTGTCCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 72 bp GACAAACCAGGTGCCCTCTGGGCAGTGGCCTCGCCCTaGGGAAGGCCTGGAGGGGTGGTGAGACATCCACCC +
Preference number: 6 (lower is better)
Translates to: DKPGALWAVASP*GRPGGVVRHPP
Trigger: GGGTGGATGTCTCACCACCCCTCCAGGCCTTCCTCAGGGCGAGGCCACTGCCCAGAGGGCACCTGGTTTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp AGCAAAGGCTCACGGCAGCAGGTGGCCGGGCAGGTGTaGTATTGCAGATGCGGCTCAGCGCCCCAGGACCAG +
Preference number: 6 (lower is better)
Translates to: SKGSRQQVAGQV*YCRCGSAPQDQ
Trigger: CTGGTCCTGGGGCGCTGAGCCGCATCTGCAATAGCACACCTGCCCGGCCACCTGCTGCCGTGAGCCTTTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000418828.1
ENST00000420670.5
ENST00000420681.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000433650.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
ENST00000540475.5
CDS GCA 72 bp TGCCTGTACCCGCTGCCCGGGCCTCACCCGGACACCTaGTCCCAGCCTCTTTTCCCGAGGATCCCACTGCTT +
Preference number: 6 (lower is better)
Translates to: CLYPLPGPHPDT*SQPLFPRIPLL
Trigger: AAGCAGTGGGATCCTCGGGAAAAGAGGCTGGGAGCAGGTGTCCGGGTGAGGCCCGGGCAGCGGGTACAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp CCTGCAGCACTCCTCTGTGTCCTCCCGGCATCCCCATaGATGTGGCCCACTCTGACCTCAGGGCTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: PAALLCVLPASP*MWPTLTSGLAA
Trigger: GGCAGCCAGCCCTGAGGTCAGAGTGGGCCACATGCATGGGGATGCCGGGAGGACACAGAGGAGTGCTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 72 bp CCCTGGAGGTGGCTTCCCCATGGCCAGCGGGAGCCTTaGCCTTGGCCCGTCCTGTGGACTTCCTGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: PWRWLPHGQREP*PWPVLWTSCSL
Trigger: CAAAGAGCAGGAAGTCCACAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CAA 72 bp ATCTTTGGTTCGCAGGATGTGCCGGTGGGCGCAGGCTaGGGAGGAAGGGTGATGGCCCCGGAGGAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: IFGSQDVPVGAG*GGRVMAPEEVA
Trigger: GGCCACCTCCTCCGGGGCCATCACCCTTCCTCCCAAGCCTGCGCCCACCGGCACATCCTGCGAACCAAAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 72 bp GCCCTGGAGGTGGCTTCCCCATGGCCAGCGGGAGCCTaGGCCTTGGCCCGTCCTGTGGACTTCCTGCTCTTT +
Preference number: 6 (lower is better)
Translates to: ALEVASPWPAGA*ALARPVDFLLF
Trigger: AAAGAGCAGGAAGTCCACAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS TCA 72 bp CTGGTCAGCAGGTCACCTCCCGGCCTTCCTTGCTCGTaGAGTCTGTTGGCCCTCCAGGGGCTGCTGGCCATG +
Preference number: 6 (lower is better)
Translates to: LVSRSPPGLPCS*SLLALQGLLAM
Trigger: CATGGCCAGCAGCCCCTGGAGGGCCAACAGACTTCACGAGCAAGGAAGGCCGGGAGGTGACCTGCTGACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS GCA 72 bp GAGCAGCGATACTCAGCGCTTTCCCTGATGGCGTCCTaGAGCCAGCTGAGTGCATGGGCCCTGCCATCGGGC +
Preference number: 6 (lower is better)
Translates to: EQRYSALSLMAS*SQLSAWALPSG
Trigger: GCCCGATGGCAGGGCCCATGCACTCAGCTGGCTGCAGGACGCCATCAGGGAAAGCGCTGAGTATCGCTGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000469653.5
ENST00000475255.5
ENST00000492386.5
ENST00000537934.5
CDS GCA 72 bp CATGGTTTCTTTCCACTATCTGGTGTTAGCAGAGTCTaGAGCGCGCGTCCTGCCCGCGGCGGCTCCCGGCCG +
Preference number: 6 (lower is better)
Translates to: HGFFPLSGVSRV*SARPARGGSRP
Trigger: CGGCCGGGAGCCGCCGCGGGCAGGACGCGCGCTGCAGACTCTGCTAACACCAGATAGTGGAAAGAAACCATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422704.7
ENST00000455551.6
CDS GCA 72 bp GCCCTGGGCCCCTCAAAGAGGACCAAGGGCGCCTTCTaGTGCTGCCCTCTGATCCCAGTGGTTCCAAGGGCT +
Preference number: 6 (lower is better)
Translates to: ALGPSKRTKGAF*CCPLIPVVPRA
Trigger: AGCCCTTGGAACCACTGGGATCAGAGGGCAGCAGCAGAAGGCGCCCTTGGTCCTCTTTGAGGGGCCCAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp ATCAGCACCGCACCCTCAGCGGGACAGGGCAGCAGGTaGAAACCCACGTATGTCCCACGGAGGACTGCTGGG +
Preference number: 6 (lower is better)
Translates to: ISTAPSAGQGSR*KPTYVPRRTAG
Trigger: CCCAGCAGTCCTCCGTGGGACATACGTGGGTTTGCACCTGCTGCCCTGTCCCGCTGAGGGTGCGGTGCTGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp GTCCCCACCTCCAGATCTCCTCCCTGCAGCAGAGGATaGATGAGCCTGGCACTCCCGGTCATCTTCCCGGCC +
Preference number: 6 (lower is better)
Translates to: VPTSRSPPCSRG*MSLALPVIFPA
Trigger: GGCCGGGAAGATGACCGGGAGTGCCAGGCTCATGCATCCTCTGCTGCAGGGAGGAGATCTGGAGGTGGGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS CCA 72 bp GTGCCTCGCTGTCGATGCACGCTCCAGGCCGCGGCTTaGGTACCGGGCCATTATAGCGCACCCACTTGGTGT +
Preference number: 6 (lower is better)
Translates to: VPRCRCTLQAAA*VPGHYSAPTWC
Trigger: ACACCAAGTGGGTGCGCTATAATGGCCCGGTACCCAAGCCGCGGCCTGGAGCGTGCATCGACAGCGAGGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000474258.1
ENST00000537934.5
CDS CAA 90 bp TTGATGACGATCTTTGGTTCGCAGGATGTGCCGGTGGGCGCAGGCTaGGGAGGAAGGGTGATGGCCCCGGAGGAGGTGGCCTGCACGGCT +
Preference number: 6 (lower is better)
Translates to: LMTIFGSQDVPVGAG*GGRVMAPEEVACTA
Trigger: AGCCGTGCAGGCCACCTCCTCCGGGGCCATCACCCTTCCTCCCAAGCCTGCGCCCACCGGCACATCCTGCGAACCAAAGATCGTCATCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 90 bp TGGTCTGATGCTGTGGGGCTCAGCAGCCACCAACCTGGATGTGCCTaGGCTCTTCCCAGTGGCGAGCCAGGTGACACTGGTCGCGCCCTC +
Preference number: 6 (lower is better)
Translates to: WSDAVGLSSHQPGCA*ALPSGEPGDTGRAL
Trigger: GAGGGCGCGACCAGTGTCACCTGGCTCGCCACTGGGAAGAGCCAAGGCACATCCAGGTTGGTGGCTGCTGAGCCCCACAGCATCAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp TGGCAAATTCAAGGAGCTGGTGTAGTTGGCGGCCCGTaGCTCGCTGTCGATGCACGCTCCAGGCCGCGGCTT +
Preference number: 6 (lower is better)
Translates to: WQIQGAGVVGGP*LAVDARSRPRL
Trigger: AAGCCGCGGCCTGGAGCGTGCATCGACAGCGAGGCACGGGCCGCCAACTACACCAGCTCCTTGAATTTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000474258.1
ENST00000537934.5
CDS GCA 72 bp CTGGGCCCCTCAAAGAGGACCAAGGGCGCCTTCTGCTaGTGCCCTCTGATCCCAGTGGTTCCAAGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: LGPSKRTKGAFC*CPLIPVVPRAL
Trigger: CAGAGCCCTTGGAACCACTGGGATCAGAGGGCAGCAGCAGAAGGCGCCCTTGGTCCTCTTTGAGGGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp ATCATGTCTTCCATGATGGGACTCCTGGCTTGTCCCTaGCTGTACCCGCTGCCCGGGCCTCACCCGGACACC +
Preference number: 6 (lower is better)
Translates to: IMSSMMGLLACP*LYPLPGPHPDT
Trigger: GGTGTCCGGGTGAGGCCCGGGCAGCGGGTACAGGCAGGGACAAGCCAGGAGTCCCATCATGGAAGACATGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp CAACCCTGTTACCTCAAGAGAGCGGCCAGGCTGGGGTaGTACTCCCAGATCACCCCCTTGGCCTCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: QPCYLKRAARLG*YSQITPLASVG
Trigger: CCCCACAGAGGCCAAGGGGGTGATCTGGGAGTAGCACCCCAGCCTGGCCGCTCTCTTGAGGTAACAGGGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp AAGGCCCCCAAATGGGCCATGGGCCACCTAGACCAGTaGCGGCCATGGCCTCTGCTTGACCATGACACCTCG +
Preference number: 6 (lower is better)
Translates to: KAPKWAMGHLDQ*RPWPLLDHDTS
Trigger: CGAGGTGTCATGGTCAAGCAGAGGCCATGGCCGGCACTGGTCTAGGTGGCCCATGGCCCATTTGGGGGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CCA 72 bp CGAGTGGAGCTGGGGGACCGTGTTGATGACGATCTTTaGTTCGCAGGATGTGCCGGTGGGCGCAGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: RVELGDRVDDDL*FAGCAGGRRLG
Trigger: CCCAAGCCTGCGCCCACCGGCACATCCTGCGAACCAAAGATCGTCATCAACACGGTCCCCCAGCTCCACTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 72 bp CTTGCTCGGTCTCATAGCCGGTGTCCAGGGCTGGCTTaGGGTGCTCCCCATTCTGCTGGGAGAAGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: LARSHSRCPGLA*GAPHSAGRSSL
Trigger: CAGGGAGCTTCTCCCAGCAGAATGGGGAGCACCCCAAGCCAGCCCTGGACACCGGCTATGAGACCGAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 72 bp CAACTTCCAATTCAGTCCCTGGGACTGCCCTGGAGGTaGCTTCCCCATGGCCAGCGGGAGCCTTGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: QLPIQSLGLPWR*LPHGQREPWPW
Trigger: CCAAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGGCAGTCCCAGGGACTGAATTGGAAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 72 bp AGCTGGAACACACACATGCGTGCCAACAGGCCACTGTaGCTGCTAGGAACGGGGGCCCTCTCCAGAGCCCTG +
Preference number: 6 (lower is better)
Translates to: SWNTHMRANRPL*LLGTGALSRAL
Trigger: CAGGGCTCTGGAGAGGGCCCCCGTTCCTAGCAGCCACAGTGGCCTGTTGGCACGCATGTGTGTGTTCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 72 bp CTGGCCTCAGCTTGTCTGATGGAGAGATCAGGAGGGTaGGCGAGGCAGAGACGTTCCCCTGTGGCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: LASACLMERSGG*ARQRRSPVAQA
Trigger: AGCCTGGGCCACAGGGGAACGTCTCTGCCTCGCCCACCCTCCTGATCTCTCCATCAGACAAGCTGAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CAA 72 bp CCCGGGGACCTGAGCACGAAGACATCCCGCAGCACATaGAAGACCAAGCCGCTGTCTGGCCGGGAGCAGATG +
Preference number: 6 (lower is better)
Translates to: PGDLSTKTSRST*KTKPLSGREQM
Trigger: CATCTGCTCCCGGCCAGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATGTCTTCGTGCTCAGGTCCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CAA 72 bp GAGGTGGCTTCCCCATGGCCAGCGGGAGCCTTGGCCTaGGCCCGTCCTGTGGACTTCCTGCTCTTTGACCTT +
Preference number: 6 (lower is better)
Translates to: EVASPWPAGALA*ARPVDFLLFDL
Trigger: AAGGTCAAAGAGCAGGAAGTCCACAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CAA 90 bp ACCTTCAGGCCCGGGGACCTGAGCACGAAGACATCCCGCAGCACATaGAAGACCAAGCCGCTGTCTGGCCGGGAGCAGATGAGTCGGGCT +
Preference number: 6 (lower is better)
Translates to: TFRPGDLSTKTSRST*KTKPLSGREQMSRA
Trigger: AGCCCGACTCATCTGCTCCCGGCCAGACAGCGGCTTGGTCTTCAATGTGCTGCGGGATGTCTTCGTGCTCAGGTCCCCGGGCCTGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CAA 90 bp CCTGGGACTGCCCTGGAGGTGGCTTCCCCATGGCCAGCGGGAGCCTaGGCCTTGGCCCGTCCTGTGGACTTCCTGCTCTTTGACCTTAAT +
Preference number: 6 (lower is better)
Translates to: PGTALEVASPWPAGA*ALARPVDFLLFDLN
Trigger: ATTAAGGTCAAAGAGCAGGAAGTCCACAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGGCAGTCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS TCA 72 bp GCACACAGTGCTGGCCGCTGGCCATCATGTCTTCCATaGTGGGACTCCTGGCTTGTCCCTGCCTGTACCCGC +
Preference number: 6 (lower is better)
Translates to: AHSAGRWPSCLP*WDSWLVPACTR
Trigger: GCGGGTACAGGCAGGGACAAGCCAGGAGTCCCATCATGGAAGACATGATGGCCAGCGGCCAGCACTGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS TCA 72 bp AGGAAGGCCTGGAGGGGTGGTGAGACATCCACCCAGTaGCTGAGTTGCTCGGGCCCATCCTGGAAAGTGCCC +
Preference number: 6 (lower is better)
Translates to: RKAWRGGETSTQ*LSCSGPSWKVP
Trigger: GGGCACTTTCCAGGATGGGCCCGAGCAACTCAGTCACTGGGTGGATGTCTCACCACCCCTCCAGGCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp GACCTCCTCGGCTGTGGACAGGTTGTAGGCGCACACTaGCGACAGCCCCACGTTGTTCAGCTGTGGGGTGAA +
Preference number: 6 (lower is better)
Translates to: DLLGCGQVVGAH*RQPHVVQLWGE
Trigger: TTCACCCCACAGCTGAACAACGTGGGGCTGTCGGCAGTGTGCGCCTACAACCTGTCCACAGCCGAGGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS GCA 72 bp GTGACTTGGGACAACTTCCAATTCAGTCCCTGGGACTaGCCTGGAGGTGGCTTCCCCATGGCCAGCGGGAGC +
Preference number: 6 (lower is better)
Translates to: VTWDNFQFSPWD*PGGGFPMASGS
Trigger: GCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGGCAGTCCCAGGGACTGAATTGGAAGTTGTCCCAAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 72 bp GCATGTACTTCCCGTGGGAGAAGACCTCCTCGGCTGTaGACAGGTTGTAGGCGCACACTGCCGACAGCCCCA +
Preference number: 6 (lower is better)
Translates to: ACTSRGRRPPRL*TGCRRTLPTAP
Trigger: TGGGGCTGTCGGCAGTGTGCGCCTACAACCTGTCCACAGCCGAGGAGGTCTTCTCCCACGGGAAGTACATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CCA 72 bp GGTGTCTTGCTCGGTCTCATAGCCGGTGTCCAGGGCTaGCTTGGGGTGCTCCCCATTCTGCTGGGAGAAGCT +
Preference number: 6 (lower is better)
Translates to: GVLLGLIAGVQG*LGVLPILLGEA
Trigger: AGCTTCTCCCAGCAGAATGGGGAGCACCCCAAGCCAGCCCTGGACACCGGCTATGAGACCGAGCAAGACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 72 bp AGGTGGCTTCCCCATGGCCAGCGGGAGCCTTGGCCTTaGCCCGTCCTGTGGACTTCCTGCTCTTTGACCTTA +
Preference number: 6 (lower is better)
Translates to: RWLPHGQREPWP*PVLWTSCSLTL
Trigger: TAAGGTCAAAGAGCAGGAAGTCCACAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 72 bp TTGGGACAACTTCCAATTCAGTCCCTGGGACTGCCCTaGAGGTGGCTTCCCCATGGCCAGCGGGAGCCTTGG +
Preference number: 6 (lower is better)
Translates to: LGQLPIQSLGLP*RWLPHGQREPW
Trigger: CCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGGCAGTCCCAGGGACTGAATTGGAAGTTGTCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 72 bp TGCTCACTCCCACCCCAAGCCTCTAACGGAGCCAGCTaGTGCCAGGACCACCATGGCTTCAGAGCTTCGTGG +
Preference number: 6 (lower is better)
Translates to: CSLPPQASNGAS*CQDHHGFRASW
Trigger: CCACGAAGCTCTGAAGCCATGGTGGTCCTGGCACCAGCTGGCTCCGTTAGAGGCTTGGGGTGGGAGTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CAA 90 bp ACTGCCCTGGAGGTGGCTTCCCCATGGCCAGCGGGAGCCTTGGCCTaGGCCCGTCCTGTGGACTTCCTGCTCTTTGACCTTAATTGCCAT +
Preference number: 6 (lower is better)
Translates to: TALEVASPWPAGALA*ARPVDFLLFDLNCH
Trigger: ATGGCAATTAAGGTCAAAGAGCAGGAAGTCCACAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS GCA 72 bp ACTCAGGGCACTGGACCAGCCCCAGCGCTTCTGGAATaGACCTGTTCATGCCTGCCACTTACTGGCCAAGCC +
Preference number: 6 (lower is better)
Translates to: TQGTGPAPALLE*TCSCLPLTGQA
Trigger: GGCTTGGCCAGTAAGTGGCAGGCATGAACAGGTGCATTCCAGAAGCGCTGGGGCTGGTCCAGTGCCCTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp TCACTCCCACCCCAAGCCTCTAACGGAGCCAGCTGGTaGCAGGACCACCATGGCTTCAGAGCTTCGTGGATG +
Preference number: 6 (lower is better)
Translates to: SLPPQASNGASW*QDHHGFRASWM
Trigger: CATCCACGAAGCTCTGAAGCCATGGTGGTCCTGGCACCAGCTGGCTCCGTTAGAGGCTTGGGGTGGGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp GCAGGGCCTCTGCTCGCCTGGGACGTCTGTCCTGACTaGAGGGGTTTCAAGGGCTCTGTTATTAGTTGGGGC +
Preference number: 6 (lower is better)
Translates to: AGPLLAWDVCPD*RGFKGSVISWG
Trigger: GCCCCAACTAATAACAGAGCCCTTGAAACCCCTGCAGTCAGGACAGACGTCCCAGGCGAGCAGAGGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482128.1
CDS GCA 72 bp ATCCCTCTCTCCCCTGTCTGGGCACCCACAGGTGCCTaGCCTCCAGCAAAGCGCTTCTCTGCACGTGTTTCT +
Preference number: 6 (lower is better)
Translates to: IPLSPVWAPTGA*PPAKRFSARVS
Trigger: AGAAACACGTGCAGAGAAGCGCTTTGCTGGAGGGCAGGCACCTGTGGGTGCCCAGACAGGGGAGAGAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS CCA 72 bp GCGGCTTGGGTACCGGGCCATTATAGCGCACCCACTTaGTGTGGGACTGCTCCACTGTGGTGCTCTGCATGT +
Preference number: 6 (lower is better)
Translates to: AAWVPGHYSAPT*CGTAPLWCSAC
Trigger: ACATGCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATAATGGCCCGGTACCCAAGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000474258.1
ENST00000537934.5
CDS CCA 72 bp GCGTCTTGTCTGGCAAATTCAAGGAGCTGGTGTAGTTaGCGGCCCGTGCCTCGCTGTCGATGCACGCTCCAG +
Preference number: 6 (lower is better)
Translates to: ASCLANSRSWCS*RPVPRCRCTLQ
Trigger: CTGGAGCGTGCATCGACAGCGAGGCACGGGCCGCCAACTACACCAGCTCCTTGAATTTGCCAGACAAGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000474258.1
ENST00000537934.5
CDS CCA 72 bp GTGTCCAGGGCTGGCTTGGGGTGCTCCCCATTCTGCTaGGAGAAGCTCCCTGGCTCTACTAACGTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: VSRAGLGCSPFC*EKLPGSTNVSF
Trigger: GAAGGAGACGTTAGTAGAGCCAGGGAGCTTCTCCCAGCAGAATGGGGAGCACCCCAAGCCAGCCCTGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 72 bp AGACCACTCAGGGCACTGGACCAGCCCCAGCGCTTCTaGAATGCACCTGTTCATGCCTGCCACTTACTGGCC +
Preference number: 6 (lower is better)
Translates to: RPLRALDQPQRF*NAPVHACHLLA
Trigger: GGCCAGTAAGTGGCAGGCATGAACAGGTGCATTCCAGAAGCGCTGGGGCTGGTCCAGTGCCCTGAGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CAA 90 bp ACCTTCACGGTGAGTGTTACAGCTCTTAAGGCAGCGCGTCTGGAGTaGTTCGTTCCTCCCGGTGGGCTCGTGGTCTCGCTGGGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: TFTVSVTALKAARLE*FVPPGGLVVSLGSG
Trigger: TCCTGAGCCCAGCGAGACCACGAGCCCACCGGGAGGAACGAACAACTCCAGACGCGCTGCCTTAAGAGCTGTAACACTCACCGTGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429836.5
ENST00000438547.6
ENST00000537934.5
ENST00000540475.5
CDS GCA 72 bp AGCGCACCCACTTGGTGTGGGACTGCTCCACTGTGGTaGTCTGCATGTACTTCCCGTGGGAGAAGACCTCCT +
Preference number: 6 (lower is better)
Translates to: SAPTWCGTAPLW*SACTSRGRRPP
Trigger: AGGAGGTCTTCTCCCACGGGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS GCA 72 bp GGAAATGTCACAGAGCAGCTGGAACACACACATGCGTaGCAACAGGCCACTGTGGCTGCTAGGAACGGGGGC +
Preference number: 6 (lower is better)
Translates to: GNVTEQLEHTHA*QQATVAARNGG
Trigger: GCCCCCGTTCCTAGCAGCCACAGTGGCCTGTTGGCACGCATGTGTGTGTTCCAGCTGCTCTGTGACATTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp GAGGCCAGTTACTTCACACACACTCAGACCATCTGTTaGAACCTGCCAGGGTGGAGCCTGGCTGGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: EASYFTHTQTIC*NLPGWSLAGLS
Trigger: GCTGAGGCCAGCCAGGCTCCACCCTGGCAGGTTGCAACAGATGGTCTGAGTGTGTGTGAAGTAACTGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS GCA 72 bp AAGGGCTCTGTTATTAGTTGGGGCTCAGGCCAGGACTaGTCCAGCCACAACAAGGCACCCTTCAGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: KGSVISWGSGQD*SSHNKAPFSAG
Trigger: CCCTGCGCTGAAGGGTGCCTTGTTGTGGCTGGAGCAGTCCTGGCCTGAGCCCCAACTAATAACAGAGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482128.1
CDS CCA 72 bp CGAACTGCAGCGTCTTGTCTGGCAAATTCAAGGAGCTaGTGTAGTTGGCGGCCCGTGCCTCGCTGTCGATGC +
Preference number: 6 (lower is better)
Translates to: RTAASCLANSRS*CSWRPVPRCRC
Trigger: GCATCGACAGCGAGGCACGGGCCGCCAACTACACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000474258.1
ENST00000537934.5
CDS CCA 72 bp CATCCAGGATGGGCTTCCAGCCTTGAGCATGGACTCTaGGCCCGACATTGGCCACTTCTGCCGCAAACCTCT +
Preference number: 6 (lower is better)
Translates to: HPGWASSLEHGL*ARHWPLLPQTS
Trigger: AGAGGTTTGCGGCAGAAGTGGCCAATGTCGGGCCCAGAGTCCATGCTCAAGGCTGGAAGCCCATCCTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CAA 72 bp CTCCCTATCCGTGGGGACTTTGCTGGTGATGGTGTCTaGCTCGGTCTCATAGCCGGTGTCCAGGGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: LPIRGDFAGDGV*LGLIAGVQGWL
Trigger: AAGCCAGCCCTGGACACCGGCTATGAGACCGAGCAAGACACCATCACCAGCAAAGTCCCCACGGATAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 72 bp GTGAGTGTTACAGCTCTTAAGGCAGCGCGTCTGGAGTaGTTCGTTCCTCCCGGTGGGCTCGTGGTCTCGCTG +
Preference number: 6 (lower is better)
Translates to: VSVTALKAARLE*FVPPGGLVVSL
Trigger: CAGCGAGACCACGAGCCCACCGGGAGGAACGAACAACTCCAGACGCGCTGCCTTAAGAGCTGTAACACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429836.5
ENST00000438547.6
ENST00000537934.5
ENST00000540475.5
CDS TCA 72 bp CCTTCCAATACACCTCATGCTGCTTCTCGGAGATGTTaGGTGCGTTCACAGCGAAGACCGCCTCCCGGGCAC +
Preference number: 6 (lower is better)
Translates to: PSNTPHAASRRC*VRSQRRPPPGH
Trigger: GTGCCCGGGAGGCGGTCTTCGCTGTGAACGCACTCAACATCTCCGAGAAGCAGCATGAGGTGTATTGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420681.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS TCA 72 bp GGGCTTGTCCCTGGCAGAAAGGTCGTCGATCCTCTGTaGGTCCTCCCTATCCGTGGGGACTTTGCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: GLVPGRKVVDPL*VLPIRGDFAGD
Trigger: ATCACCAGCAAAGTCCCCACGGATAGGGAGGACTCACAGAGGATCGACGACCTTTCTGCCAGGGACAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 72 bp CCACGTGCAGGACTGCAGACGCTCAGGAGCCGACGCTaGTCCCTCCATGATTCTATTAACACAGGAGCCACG +
Preference number: 6 (lower is better)
Translates to: PRAGLQTLRSRR*SLHDSINTGAT
Trigger: CGTGGCTCCTGTGTTAATAGAATCATGGAGGGATCAGCGTCGGCTCCTGAGCGTCTGCAGTCCTGCACGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS TCA 72 bp TGGATGTGCCTTGGCTCTTCCCAGTGGCGAGCCAGGTaGCACTGGTCGCGCCCTCAAAGAAGGGAAGTTGTT +
Preference number: 6 (lower is better)
Translates to: WMCLGSSQWRAR*HWSRPQRREVV
Trigger: AACAACTTCCCTTCTTTGAGGGCGCGACCAGTGTCACCTGGCTCGCCACTGGGAAGAGCCAAGGCACATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp CACGGCTGGGGTTGGGGGAGAAGACCCTTGGGTGGATaGCACCAACACTTTGGTGGCAATCCTACTACCTTC +
Preference number: 6 (lower is better)
Translates to: HGWGWGRRPLGG*HQHFGGNPTTF
Trigger: GAAGGTAGTAGGATTGCCACCAAAGTGTTGGTGGCATCCACCCAAGGGTCTTCTCCCCCAACCCCAGCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS GCA 72 bp AAATATGGAGCTGATTCTACTCTGCGACAAACCAGGTaGCCTCTGGGCAGTGGCCTCGCCCTGAGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: KYGADSTLRQTR*PLGSGLALRKA
Trigger: GGCCTTCCTCAGGGCGAGGCCACTGCCCAGAGGGCACCTGGTTTGTCGCAGAGTAGAATCAGCTCCATATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp AGGCAAGCAGGCATCCAGGAGCATGGCCTCTGCTTCTaGACCAGTGTGTGGGAAGCAGCCAGAGTGTACCTT +
Preference number: 6 (lower is better)
Translates to: RQAGIQEHGLCF*TSVWEAARVYL
Trigger: AAGGTACACTCTGGCTGCTTCCCACACACTGGTGCAGAAGCAGAGGCCATGCTCCTGGATGCCTGCTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS CCA 72 bp GTTGGTCCCACACACGTAAAGGGAAGTGGCGCTGAGTaGCTGCAGCACCCGGATGTAGTTGAGGCACTCTGT +
Preference number: 6 (lower is better)
Translates to: VGPTHVKGSGAE*LQHPDVVEALC
Trigger: ACAGAGTGCCTCAACTACATCCGGGTGCTGCAGCCACTCAGCGCCACTTCCCTTTACGTGTGTGGGACCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420681.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CCA 72 bp CAGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTCGCTaGCTCGGGAGTGAAGCTGCAGACCTTCACGGTGAG +
Preference number: 6 (lower is better)
Translates to: QSFFLLVGSWSR*LGSEAADLHGE
Trigger: CTCACCGTGAAGGTCTGCAGCTTCACTCCCGAGCCAGCGAGACCACGAACCCACCAGAAGGAAGAAACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429836.5
ENST00000438547.6
ENST00000537934.5
ENST00000540475.5
CDS CCA 72 bp ACAGTCACCAGGCCGACGCAGCCTAACGTTTCACTCTaGTATGCTCTAGACCACTCAGGGCACTGGACCAGC +
Preference number: 6 (lower is better)
Translates to: TVTRPTQPNVSL*YALDHSGHWTS
Trigger: GCTGGTCCAGTGCCCTGAGTGGTCTAGAGCATACCAGAGTGAAACGTTAGGCTGCGTCGGCCTGGTGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 72 bp CTCAGACCATCTGTTGCAACCTGCCAGGGTGGAGCCTaGCTGGCCTCAGCTTGTCTGATGGAGAGATCAGGA +
Preference number: 6 (lower is better)
Translates to: LRPSVATCQGGA*LASACLMERSG
Trigger: TCCTGATCTCTCCATCAGACAAGCTGAGGCCAGCCAGGCTCCACCCTGGCAGGTTGCAACAGATGGTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CAA 90 bp GACTTAAGATACATGGTTTTCTCCGAGTGGAGCTGGGGGACCGTGTaGATGACGATCTTTGGTTCGCAGGATGTGCCGGTGGGCGCAGGC +
Preference number: 6 (lower is better)
Translates to: DLRYMVFSEWSWGTV*MTIFGSQDVPVGAG
Trigger: GCCTGCGCCCACCGGCACATCCTGCGAACCAAAGATCGTCATCAACACGGTCCCCCAGCTCCACTCGGAGAAAACCATGTATCTTAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 90 bp CAGGTGAGGAGGGGTCGCTCTCACCACCGCAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTCAGAAGAAATGCCGGGTCCATCTGC +
Preference number: 6 (lower is better)
Translates to: QVRRGRSHHRNVKAH*ILLQGLRRNAGSIC
Trigger: GCAGATGGACCCGGCATTTCTTCTGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATTGCGGTGGTGAGAGCGACCCCTCCTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433650.5
CDS CAA 90 bp GTCCACCGTGGTGTGGCAAGGTTCCATAGCATGGCTGTCACTCCTTaGCAGTGTGGGAGATCAGTCTCAAGACAGGGATCGTGGGGTGCA +
Preference number: 6 (lower is better)
Translates to: VHRGVARFHSMAVTP*QCGRSVSRQGSWGA
Trigger: TGCACCCCACGATCCCTGTCTTGAGACTGATCTCCCACACTGCAAAGGAGTGACAGCCATGCTATGGAACCTTGCCACACCACGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS TCA 72 bp CGGTCCCTGAGAATCCACATTTCCCAGTTCTCCAGGTaGGGAGGGGTCGCTCTCACCACCGCAATGTCAAAG +
Preference number: 6 (lower is better)
Translates to: RSLRIHISQFSR*GGVALTTAMSK
Trigger: CTTTGACATTGCGGTGGTGAGAGCGACCCCTCCTCACCTGGAGAACTGGGAAATGTGGATTCTCAGGGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000418828.1
ENST00000420670.5
ENST00000420681.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000433650.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000464051.1
ENST00000537934.5
ENST00000540475.5
CDS TCA 72 bp TCTGTGAGTCCTCCCTATCCGTGGGGACTTTGCTGGTaGTGGTGTCTTGCTCGGTCTCATAGCCGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: SVSPPYPWGLCW*WCLARSHSRCP
Trigger: TGGACACCGGCTATGAGACCGAGCAAGACACCATCACCAGCAAAGTCCCCACGGATAGGGAGGACTCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 72 bp GGGGATGCACAGCCGGCCTCAGTCTCCATCTGCGTCTaGGTCAGCGAACTTCAGCTCACACTTGACGTCAAA +
Preference number: 6 (lower is better)
Translates to: GDAQPASVSICV*VSELQLTLDVK
Trigger: TTTGACGTCAAGTGTGAGCTGAAGTTCGCTGACTCAGACGCAGATGGAGACTGAGGCCGGCTGTGCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 72 bp ACCTCTTCTCTGCAAAGGGACCTGAGAAAGTACCACTaGGGCATCTGTAGGCATCGCCTGGCTCCATGGGGG +
Preference number: 6 (lower is better)
Translates to: TSSLQRDLRKYH*GICRHRLAPWG
Trigger: CCCCCATGGAGCCAGGCGATGCCTACAGATGCCTCAGTGGTACTTTCTCAGGTCCCTTTGCAGAGAAGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS TCA 72 bp TCTGGGGACAAGGACAGTGCAGCTGGGGGTATGCCCTaGGGCCTTGTTGGTCATCCTTTCTGTCCTCTGTTG +
Preference number: 6 (lower is better)
Translates to: SGDKDSAAGGMP*GLVGHPFCPLL
Trigger: CAACAGAGGACAGAAAGGATGACCAACAAGGCCTCAGGGCATACCCCCAGCTGCACTGTCCTTGTCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp CACCTCTCTGTGCTCCCAGGTGATCCGGGGTATGGGTaGAAATGCCATCGCTGTCCCAAACATCACTGCAAG +
Preference number: 6 (lower is better)
Translates to: HLSVLPGDPGYG*KCHRCPKHHCK
Trigger: CTTGCAGTGATGTTTGGGACAGCGATGGCATTTGCACCCATACCCCGGATCACCTGGGAGCACAGAGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000418828.1
ENST00000420681.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000433650.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
ENST00000540475.5
CDS GCA 72 bp CCAATACACCTCATGCTGCTTCTCGGAGATGTTGAGTaGGTTCACAGCGAAGACCGCCTCCCGGGCACCTAT +
Preference number: 6 (lower is better)
Translates to: PIHLMLLLGDVE*VHSEDRLPGTY
Trigger: ATAGGTGCCCGGGAGGCGGTCTTCGCTGTGAACGCACTCAACATCTCCGAGAAGCAGCATGAGGTGTATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420681.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CCA 72 bp TATAGCGCACCCACTTGGTGTGGGACTGCTCCACTGTaGTGCTCTGCATGTACTTCCCGTGGGAGAAGACCT +
Preference number: 6 (lower is better)
Translates to: YSAPTWCGTAPL*CSACTSRGRRP
Trigger: AGGTCTTCTCCCACGGGAAGTACATGCAGAGCACCACAGTGGAGCAGTCCCACACCAAGTGGGTGCGCTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CCA 72 bp GTTTCACTCTGGTATGCTCTAGACCACTCAGGGCACTaGACCAGCCCCAGCGCTTCTGGAATGCACCTGTTC +
Preference number: 6 (lower is better)
Translates to: VSLWYALDHSGH*TSPSASGMHLF
Trigger: GAACAGGTGCATTCCAGAAGCGCTGGGGCTGGTCCAGTGCCCTGAGTGGTCTAGAGCATACCAGAGTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 72 bp GCAAAGCGCTTCTCTGCACGTGTTTCTCTTAGCCAGTaGGGAGGCTGTTCAGTCCCCACCTCCAGATCTCCT +
Preference number: 6 (lower is better)
Translates to: AKRFSARVSLSQ*GGCSVPTSRSP
Trigger: AGGAGATCTGGAGGTGGGGACTGAACAGCCTCCCCACTGGCTAAGAGAAACACGTGCAGAGAAGCGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS CCA 72 bp CTTCCTGCAGAATCCACGTGCTATGTCAGGGCTCACTaGGCCTTAGGTCCAAATCCCTCTCTCCCCTGTCTG +
Preference number: 6 (lower is better)
Translates to: LPAESTCYVRAH*ALGPNPSLPCL
Trigger: CAGACAGGGGAGAGAGGGATTTGGACCTAAGGCCCAGTGAGCCCTGACATAGCACGTGGATTCTGCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS CAA 72 bp ACCTTCCAATACACCTCATGCTGCTTCTCGGAGATGTaGAGTGCGTTCACAGCGAAGACCGCCTCCCGGGCA +
Preference number: 6 (lower is better)
Translates to: TFQYTSCCFSEM*SAFTAKTASRA
Trigger: TGCCCGGGAGGCGGTCTTCGCTGTGAACGCACTCAACATCTCCGAGAAGCAGCATGAGGTGTATTGGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420681.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CAA 72 bp TCTGAACAACTGACAAGGTGGGGGCCACTACGGGCTTaGGAACCACCTTCACTTCCAGGACGTGCTTGGCGA +
Preference number: 6 (lower is better)
Translates to: SEQLTRWGPLRA*EPPSLPGRAWR
Trigger: TCGCCAAGCACGTCCTGGAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCCCCCACCTTGTCAGTTGTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 72 bp CCCCAGGTCAAAGCTCTGTGGGCCTTTATGGCACCCTaGATGCCCACTGGCCACCTTTCTCAATGGAAAGCC +
Preference number: 6 (lower is better)
Translates to: PQVKALWAFMAP*MPTGHLSQWKA
Trigger: GGCTTTCCATTGAGAAAGGTGGCCAGTGGGCATCAAGGGTGCCATAAAGGCCCACAGAGCTTTGACCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CAA 90 bp GGGGCCACTACGGGCTTTGGAACCACCTTCACTTCCAGGACGTGCTaGGCGACCACTTGGAAGACCGTTTTGTTCTTAACCCTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: GATTGFGTTFTSRTC*ATTWKTVLFLTLSS
Trigger: AGAGGAGAGGGTTAAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 90 bp TACCTTCTGTCTGAACAACTGACAAGGTGGGGGCCACTACGGGCTTaGGAACCACCTTCACTTCCAGGACGTGCTTGGCGACCACTTGGA +
Preference number: 6 (lower is better)
Translates to: YLLSEQLTRWGPLRA*EPPSLPGRAWRPLG
Trigger: TCCAAGTGGTCGCCAAGCACGTCCTGGAAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCCCCCACCTTGTCAGTTGTTCAGACAGAAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 90 bp GCGTCTGAGTCAGCGAACTTCAGCTCACACTTGACGTCAAAGGGCTaGTCCCTGGCAGAAAGGTCGTCGATCCTCTGTGAGTCCTCCCTA +
Preference number: 6 (lower is better)
Translates to: ASESANFSSHLTSKG*SLAERSSILCESSL
Trigger: TAGGGAGGACTCACAGAGGATCGACGACCTTTCTGCCAGGGACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGTTCGCTGACTCAGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 90 bp CCTCAGTCTCCATCTGCGTCTGAGTCAGCGAACTTCAGCTCACACTaGACGTCAAAGGGCTTGTCCCTGGCAGAAAGGTCGTCGATCCTC +
Preference number: 6 (lower is better)
Translates to: PQSPSASESANFSSH*TSKGLSLAERSSIL
Trigger: GAGGATCGACGACCTTTCTGCCAGGGACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGTTCGCTGACTCAGACGCAGATGGAGACTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 90 bp CAGGTGAGGAGGGGTCGCTCTCACCACCGCAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTCAGAAGAAATGCTTTCCAGGGGCCA +
Preference number: 6 (lower is better)
Translates to: QVRRGRSHHRNVKAH*ILLQGLRRNAFQGP
Trigger: TGGCCCCTGGAAAGCATTTCTTCTGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATTGCGGTGGTGAGAGCGACCCCTCCTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418828.1
CDS CAA 90 bp GAAGCTGCCTCATCTAACATGCGAAGGACCTCAGAGCACAGGGAGTaGATAGCACCACCTTGTCCTGTCCAGCAAGGGTGGCCCAACACA +
Preference number: 6 (lower is better)
Translates to: EAASSNMRRTSEHRE*IAPPCPVQQGWPNT
Trigger: TGTGTTGGGCCACCCTTGCTGGACAGGACAAGGTGGTGCTATCAACTCCCTGTGCTCTGAGGTCCTTCGCATGTTAGATGAGGCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS TCA 72 bp GGGGTCGCTCTCACCACCGCAATGTCAAAGCCCACTTaGTACTTCTTCAGGGCCTCAGAAGAAATGCCGGGT +
Preference number: 6 (lower is better)
Translates to: GVALTTAMSKPT*YFFRASEEMPG
Trigger: ACCCGGCATTTCTTCTGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATTGCGGTGGTGAGAGCGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433650.5
CDS TCA 72 bp CCCAGGTCAAAGCTCTGTGGGCCTTTATGGCACCCTTaGTGCCCACTGGCCACCTTTCTCAATGGAAAGCCA +
Preference number: 6 (lower is better)
Translates to: PRSKLCGPLWHP*CPLATFLNGKP
Trigger: TGGCTTTCCATTGAGAAAGGTGGCCAGTGGGCATCAAGGGTGCCATAAAGGCCCACAGAGCTTTGACCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS GCA 72 bp TCCCAGCAGGGCCTCCTGAAAACACCACTGTTTTCTTaGTTGGGCCAGTGCTCCAAGCTCCCTAACCATCCA +
Preference number: 6 (lower is better)
Translates to: SQQGLLKTPLFS*LGQCSKLPNHP
Trigger: TGGATGGTTAGGGAGCTTGGAGCACTGGCCCAAGCAAGAAAACAGTGGTGTTTTCAGGAGGCCCTGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 72 bp GAAGTAGACCCTGTCATCCTCGCCGTCGGGGCTGTCTaGGCTTTTTCGGATCACGTCAGCAAACACGAAACT +
Preference number: 6 (lower is better)
Translates to: EVDPVILAVGAV*AFSDHVSKHET
Trigger: AGTTTCGTGTTTGCTGACGTGATCCGAAAAAGCCCAGACAGCCCCGACGGCGAGGATGACAGGGTCTACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CCA 72 bp CCGTACTTGGGGCTCTCGGCCTTCAACACGCCATTCTaGAACTTCCAAAAGACCCGGGCCAGGTTGGATTTT +
Preference number: 6 (lower is better)
Translates to: PYLGLSAFNTPF*NFQKTRARLDF
Trigger: AAAATCCAACCTGGCCCGGGTCTTTTGGAAGTTCCAGAATGGCGTGTTGAAGGCCGAGAGCCCCAAGTACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
ENST00000486935.2
CDS CCA 72 bp GTGTCCCCTAGGACCCCCTTTCTTGCAGCGCTGTGCTaGTTTCTTACAGAATGGTTCTGGGCCTTGGAACAG +
Preference number: 6 (lower is better)
Translates to: VSPRTPFLAALC*FLTEWFWALEQ
Trigger: CTGTTCCAAGGCCCAGAACCATTCTGTAAGAAACCAGCACAGCGCTGCAAGAAAGGGGGTCCTAGGGGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CCA 72 bp ACGGTGTCCACCGTGGTGTGGCAAGGTTCCATAGCATaGCTGTCACTCCTTTGCAGTGTGGGAGATCAGTCT +
Preference number: 6 (lower is better)
Translates to: TVSTVVWQGSIA*LSLLCSVGDQS
Trigger: AGACTGATCTCCCACACTGCAAAGGAGTGACAGCCATGCTATGGAACCTTGCCACACCACGGTGGACACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS CCA 72 bp GGACAGTGCAGCTGGGGGTATGCCCTGAGGCCTTGTTaGTCATCCTTTCTGTCCTCTGTTGAAGTCACAGAG +
Preference number: 6 (lower is better)
Translates to: GQCSWGYALRPC*SSFLSSVEVTE
Trigger: CTCTGTGACTTCAACAGAGGACAGAAAGGATGACCAACAAGGCCTCAGGGCATACCCCCAGCTGCACTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CAA 72 bp TACATGGTTTTCTCCGAGTGGAGCTGGGGGACCGTGTaGATGACGATCTTTGGTTCGCAGGATGTGCCGGTG +
Preference number: 6 (lower is better)
Translates to: YMVFSEWSWGTV*MTIFGSQDVPV
Trigger: CACCGGCACATCCTGCGAACCAAAGATCGTCATCAACACGGTCCCCCAGCTCCACTCGGAGAAAACCATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 72 bp CCATCTGCGTCTGAGTCAGCGAACTTCAGCTCACACTaGACGTCAAAGGGCTTGTCCCTGGCAGAAAGGTCG +
Preference number: 6 (lower is better)
Translates to: PSASESANFSSH*TSKGLSLAERS
Trigger: CGACCTTTCTGCCAGGGACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGTTCGCTGACTCAGACGCAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 72 bp CACCTGTGTGGCCTGTGTCCCCTAGGACCCCCTTTCTaGCAGCGCTGTGCTGGTTTCTTACAGAATGGTTCT +
Preference number: 6 (lower is better)
Translates to: HLCGLCPLGPPF*QRCAGFLQNGS
Trigger: AGAACCATTCTGTAAGAAACCAGCACAGCGCTGCAAGAAAGGGGGTCCTAGGGGACACAGGCCACACAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CAA 72 bp AGGGGTCGCTCTCACCACCGCAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTCAGAAGAAATGCCGGG +
Preference number: 6 (lower is better)
Translates to: RGRSHHRNVKAH*ILLQGLRRNAG
Trigger: CCCGGCATTTCTTCTGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATTGCGGTGGTGAGAGCGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433650.5
CDS CAA 72 bp CCAGGTCTCATCACAGCAACCTGCACCTTCGAAGTCTaGTTCCCTGCTGAGGAGAGGACAGAGCAGCGATAC +
Preference number: 6 (lower is better)
Translates to: PGLITATCTFEV*FPAEERTEQRY
Trigger: GTATCGCTGCTCTGTCCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CAA 90 bp TGGGTCACTTCAGGTCTCATCACAGCAACCTGCACCTTCGAAGTCTaGTTCCCTGCTGAGGAGAGGACAGAGCAGCGATACTCAGCGCTT +
Preference number: 6 (lower is better)
Translates to: WVTSGLITATCTFEV*FPAEERTEQRYSAL
Trigger: AAGCGCTGAGTATCGCTGCTCTGTCCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAGACCTGAAGTGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000469653.5
ENST00000492386.5
ENST00000537934.5
CDS CAA 90 bp GCCTTCAACACGCCATTCTGGAACTTCCAAAAGACCCGGGCCAGGTaGGATTTTTGGGAGCATTTCAGTTCCGCTGTGCCACCGTGCTTG +
Preference number: 6 (lower is better)
Translates to: AFNTPFWNFQKTRAR*DFWEHFSSAVPPCL
Trigger: CAAGCACGGTGGCACAGCGGAACTGAAATGCTCCCAAAAATCCAACCTGGCCCGGGTCTTTTGGAAGTTCCAGAATGGCGTGTTGAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
ENST00000486935.2
CDS CAA 90 bp ACCTTCACTTCCAGGACGTGCTTGGCGACCACTTGGAAGACCGTTTaGTTCTTAACCCTCTCCTCTGACAGGCACTGGTACACCCCACTG +
Preference number: 6 (lower is better)
Translates to: TFTSRTCLATTWKTV*FLTLSSDRHWYTPL
Trigger: CAGTGGGGTGTACCAGTGCCTGTCAGAGGAGAGGGTTAAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGTGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 90 bp GCTGGTGCTAGAGATGAGCCCCAGGACCCGACCAGGTGTACTTTCTaGCACAATAAGCCATTCCAGTTAGCAGAGTCTTTCCAGGGGCCA +
Preference number: 6 (lower is better)
Translates to: AGARDEPQDPTRCTF*HNKPFQLAESFQGP
Trigger: TGGCCCCTGGAAAGACTCTGCTAACTGGAATGGCTTATTGTGCAAGAAAGTACACCTGGTCGGGTCCTGGGGCTCATCTCTAGCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482128.1
CDS TCA 72 bp TCAAAGTCCTGGAAGAGCTGGGTCTCCTCGATGATGTaGACAGCGTGCTCGAGGCTGATGGCTTTGTGCAGA +
Preference number: 6 (lower is better)
Translates to: SKSWKSWVSSMM*TACSRLMALCR
Trigger: TCTGCACAAAGCCATCAGCCTCGAGCACGCTGTTCACATCATCGAGGAGACCCAGCTCTTCCAGGACTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
ENST00000544513.1
CDS TCA 72 bp CATCTGCGTCTGAGTCAGCGAACTTCAGCTCACACTTaGCGTCAAAGGGCTTGTCCCTGGCAGAAAGGTCGT +
Preference number: 6 (lower is better)
Translates to: HLRLSQRTSAHT*RQRACPWQKGR
Trigger: ACGACCTTTCTGCCAGGGACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGTTCGCTGACTCAGACGCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 72 bp AGGTACTCAGAACCAGAGGCAAACAAGGCAGGTCTGTaGCCTTCCTGCAGAATCCACGTGCTATGTCAGGGC +
Preference number: 6 (lower is better)
Translates to: RYSEPEANKAGL*PSCRIHVLCQG
Trigger: GCCCTGACATAGCACGTGGATTCTGCAGGAAGGTCACAGACCTGCCTTGTTTGCCTCTGGTTCTGAGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS GCA 72 bp TGGATTTCCCAGTTTTCCTACCAGAGGACACAGATGTaGTGTCACTGTCAAGCCTGCCAAGCCCTCGGAACC +
Preference number: 6 (lower is better)
Translates to: WISQFSYQRTQM*CHCQACQALGT
Trigger: GGTTCCGAGGGCTTGGCAGGCTTGACAGTGACAGCACATCTGTGTCCTCTGGTAGGAAAACTGGGAAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474258.1
CDS GCA 72 bp ACAAGGCAGGTCTGTGACCTTCCTGCAGAATCCACGTaGTATGTCAGGGCTCACTGGGCCTTAGGTCCAAAT +
Preference number: 6 (lower is better)
Translates to: TRQVCDLPAEST*YVRAHWALGPN
Trigger: ATTTGGACCTAAGGCCCAGTGAGCCCTGACATAGCACGTGGATTCTGCAGGAAGGTCACAGACCTGCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS CCA 72 bp CAAAGGGTGGTCTTTAACGAACTGCAGCGTCTTGTCTaGCAAATTCAAGGAGCTGGTGTAGTTGGCGGCCCG +
Preference number: 6 (lower is better)
Translates to: QRVVFNELQRLV*QIQGAGVVGGP
Trigger: CGGGCCGCCAACTACACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCACCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000474258.1
ENST00000537934.5
CDS CCA 72 bp CGCCATTCTGGAACTTCCAAAAGACCCGGGCCAGGTTaGATTTTTGGGAGCATTTCAGTTCCGCTGTGCCAC +
Preference number: 6 (lower is better)
Translates to: RHSGTSKRPGPG*IFGSISVPLCH
Trigger: GTGGCACAGCGGAACTGAAATGCTCCCAAAAATCCAACCTGGCCCGGGTCTTTTGGAAGTTCCAGAATGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
ENST00000486935.2
CDS CCA 72 bp CCTTCAGGCTCTGCTCACGGTCACAGAAATCTGACTTaGGCTTCTTCTTCCCAATTAGTAGGGCCGAGCGGA +
Preference number: 6 (lower is better)
Translates to: PSGSAHGHRNLT*ASSSQLVGPSG
Trigger: TCCGCTCGGCCCTACTAATTGGGAAGAAGAAGCCCAAGTCAGATTTCTGTGACCGTGAGCAGAGCCTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 72 bp AGATGTGTTCAGAGTTTCTTCCTTCTGGTGGGTTCGTaGTCTCGCTGGCTCGGGAGTGAAGCTGCAGACCTT +
Preference number: 6 (lower is better)
Translates to: RCVQSFFLLVGS*SRWLGSEAADL
Trigger: AAGGTCTGCAGCTTCACTCCCGAGCCAGCGAGACCACGAACCCACCAGAAGGAAGAAACTCTGAACACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429836.5
ENST00000438547.6
ENST00000537934.5
ENST00000540475.5
CDS CCA 72 bp GGTTTTCAGCCAAACAGAACGGTGTCCACCGTGGTGTaGCAAGGTTCCATAGCATGGCTGTCACTCCTTTGC +
Preference number: 6 (lower is better)
Translates to: GFQPNRTVSTVV*QGSIAWLSLLC
Trigger: GCAAAGGAGTGACAGCCATGCTATGGAACCTTGCCACACCACGGTGGACACCGTTCTGTTTGGCTGAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS CCA 72 bp GAGTTGATAGCACCACCTTGTCCTGTCCAGCAAGGGTaGCCCAACACACAAGGTCAACTAATTCCCACGACG +
Preference number: 6 (lower is better)
Translates to: ELIAPPCPVQQG*PNTQGQLIPTT
Trigger: CGTCGTGGGAATTAGTTGACCTTGTGTGTTGGGCCACCCTTGCTGGACAGGACAAGGTGGTGCTATCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 72 bp GCTTCTGGAATGCACCTGTTCATGCCTGCCACTTACTaGCCAAGCCGCCTTATCAATGTGGGCAGGAATCCT +
Preference number: 6 (lower is better)
Translates to: ASGMHLFMPATY*PSRLINVGRNP
Trigger: AGGATTCCTGCCCACATTGATAAGGCGGCTTGGCCAGTAAGTGGCAGGCATGAACAGGTGCATTCCAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CAA 72 bp TCAGGTCTCATCACAGCAACCTGCACCTTCGAAGTCTaGTTCCCTGCTGAGGAGAGGACAGAGCAGCGATAC +
Preference number: 6 (lower is better)
Translates to: SGLITATCTFEV*FPAEERTEQRY
Trigger: GTATCGCTGCTCTGTCCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAGACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339861.8
ENST00000420101.6
ENST00000420987.5
ENST00000429836.5
ENST00000455551.6
ENST00000469653.5
ENST00000492386.5
ENST00000537934.5
CDS CAA 72 bp TCCAGGACGTGCTTGGCGACCACTTGGAAGACCGTTTaGTTCTTAACCCTCTCCTCTGACAGGCACTGGTAC +
Preference number: 6 (lower is better)
Translates to: SRTCLATTWKTV*FLTLSSDRHWY
Trigger: GTACCAGTGCCTGTCAGAGGAGAGGGTTAAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 72 bp TCAGCGAACTTCAGCTCACACTTGACGTCAAAGGGCTaGTCCCTGGCAGAAAGGTCGTCGATCCTCTGTGAG +
Preference number: 6 (lower is better)
Translates to: SANFSSHLTSKG*SLAERSSILCE
Trigger: CTCACAGAGGATCGACGACCTTTCTGCCAGGGACAAGCCCTTTGACGTCAAGTGTGAGCTGAAGTTCGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 72 bp GGTGTGGCAAGGTTCCATAGCATGGCTGTCACTCCTTaGCAGTGTGGGAGATCAGTCTCAAGACAGGGATCG +
Preference number: 6 (lower is better)
Translates to: GVARFHSMAVTP*QCGRSVSRQGS
Trigger: CGATCCCTGTCTTGAGACTGATCTCCCACACTGCAAAGGAGTGACAGCCATGCTATGGAACCTTGCCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS CAA 90 bp AAGCAGGGTCCCCAGGTCAAAGCTCTGTGGGCCTTTATGGCACCCTaGATGCCCACTGGCCACCTTTCTCAATGGAAAGCCAATAAAACC +
Preference number: 6 (lower is better)
Translates to: KQGPQVKALWAFMAP*MPTGHLSQWKANKT
Trigger: GGTTTTATTGGCTTTCCATTGAGAAAGGTGGCCAGTGGGCATCAAGGGTGCCATAAAGGCCCACAGAGCTTTGACCTGGGGACCCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS TCA 72 bp TTTGGTGGCAATCCTACTACCTTCTGTCTGAACAACTaGCAAGGTGGGGGCCACTACGGGCTTTGGAACCAC +
Preference number: 6 (lower is better)
Translates to: FGGNPTTFCLNN*QGGGHYGLWNH
Trigger: GTGGTTCCAAAGCCCGTAGTGGCCCCCACCTTGTCAGTTGTTCAGACAGAAGGTAGTAGGATTGCCACCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 72 bp GGGGTCGCTCTCACCACCGCAATGTCAAAGCCCACTTaGTACTTCTTCAGGGCCTCAGAAGAAATGCAAACC +
Preference number: 6 (lower is better)
Translates to: GVALTTAMSKPT*YFFRASEEMQT
Trigger: GGTTTGCATTTCTTCTGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATTGCGGTGGTGAGAGCGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422704.7
ENST00000540475.5
CDS TCA 72 bp CTGGCCAAGCCGCCTTATCAATGTGGGCAGGAATCCTaGACCTCTTCTCTGCAAAGGGACCTGAGAAAGTAC +
Preference number: 6 (lower is better)
Translates to: LAKPPYQCGQES*TSSLQRDLRKY
Trigger: GTACTTTCTCAGGTCCCTTTGCAGAGAAGAGGTTCAGGATTCCTGCCCACATTGATAAGGCGGCTTGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp GTGTGGCAAGGTTCCATAGCATGGCTGTCACTCCTTTaGAGTGTGGGAGATCAGTCTCAAGACAGGGATCGT +
Preference number: 6 (lower is better)
Translates to: VWQGSIAWLSLL*SVGDQSQDRDR
Trigger: ACGATCCCTGTCTTGAGACTGATCTCCCACACTGCAAAGGAGTGACAGCCATGCTATGGAACCTTGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS GCA 72 bp CATGGGAATCACTTACCAGGTCTCATCACAGCAACCTaGACCTTCGAAGTCTTGTTCCCTGCTGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: HGNHLPGLITAT*TFEVLFPAEER
Trigger: CCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAGACCTGGTAAGTGATTCCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS GCA 72 bp CAGAAGCATCGCCGCTCATCTCCTGAATCAAACCCCTaGAAAACAACCGGCACGTGTTATTCACCCACACAC +
Preference number: 6 (lower is better)
Translates to: QKHRRSSPESNP*KTTGTCYSPTH
Trigger: GTGTGTGGGTGAATAACACGTGCCGGTTGTTTTGCAGGGGTTTGATTCAGGAGATGAGCGGCGATGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540183.1
CDS CCA 72 bp ACCACCTTCACTTCCAGGACGTGCTTGGCGACCACTTaGAAGACCGTTTTGTTCTTAACCCTCTCCTCTGAC +
Preference number: 6 (lower is better)
Translates to: TTFTSRTCLATT*KTVLFLTLSSD
Trigger: GTCAGAGGAGAGGGTTAAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGTGAAGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 72 bp ATTCTTCTCCCAGACAAAGCGAATGTCTGCAGGACCTaGGGACACAGACCGTTTCCACCTCTGAGTCCACAT +
Preference number: 6 (lower is better)
Translates to: ILLPDKANVCRT*GHRPFPPLSPH
Trigger: ATGTGGACTCAGAGGTGGAAACGGTCTGTGTCCCCAGGTCCTGCAGACATTCGCTTTGTCTGGGAGAAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420101.6
ENST00000475255.5
CDS CAA 72 bp ACGCCATTCTGGAACTTCCAAAAGACCCGGGCCAGGTaGGATTTTTGGGAGCATTTCAGTTCCGCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: TPFWNFQKTRAR*DFWEHFSSAVP
Trigger: TGGCACAGCGGAACTGAAATGCTCCCAAAAATCCAACCTGGCCCGGGTCTTTTGGAAGTTCCAGAATGGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
ENST00000486935.2
CDS CAA 72 bp ACGGGCTTTGGAACCACCTTCACTTCCAGGACGTGCTaGGCGACCACTTGGAAGACCGTTTTGTTCTTAACC +
Preference number: 6 (lower is better)
Translates to: TGFGTTFTSRTC*ATTWKTVLFLT
Trigger: GGTTAAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGTGAAGGTGGTTCCAAAGCCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 90 bp CAGGTGAGGAGGGGTCGCTCTCACCACCGCAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTCAGAAGAAATGCTGTATCTTATGCC +
Preference number: 6 (lower is better)
Translates to: QVRRGRSHHRNVKAH*ILLQGLRRNAVSYA
Trigger: GGCATAAGATACAGCATTTCTTCTGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATTGCGGTGGTGAGAGCGACCCCTCCTCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420670.5
ENST00000420681.6
ENST00000420987.5
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000464051.1
ENST00000482128.1
ENST00000537934.5
CDS CAA 90 bp CAGGTGAGGAGGGGTCGCTCTCACCACCGCAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTCAGAAGAAATGCAAACCATCAGTGT +
Preference number: 6 (lower is better)
Translates to: QVRRGRSHHRNVKAH*ILLQGLRRNANHQC
Trigger: ACACTGATGGTTTGCATTTCTTCTGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATTGCGGTGGTGAGAGCGACCCCTCCTCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422704.7
ENST00000540475.5
CDS CAA 90 bp AATCACTTACCAGGTCTCATCACAGCAACCTGCACCTTCGAAGTCTaGTTCCCTGCTGAGGAGAGGACAGAGCAGCGATACTCAGCGCTT +
Preference number: 6 (lower is better)
Translates to: NHLPGLITATCTFEV*FPAEERTEQRYSAL
Trigger: AAGCGCTGAGTATCGCTGCTCTGTCCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAGACCTGGTAAGTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CAA 90 bp GCTGGTGCTAGAGATGAGCCCCAGGACCCGACCAGGTGTACTTTCTaGCACAATAAGCCATTCCAGTTAGCAGAGTCAAACCATCAGTGT +
Preference number: 6 (lower is better)
Translates to: AGARDEPQDPTRCTF*HNKPFQLAESNHQC
Trigger: ACACTGATGGTTTGACTCTGCTAACTGGAATGGCTTATTGTGCAAGAAAGTACACCTGGTCGGGTCCTGGGGCTCATCTCTAGCACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000420987.5
ENST00000438547.6
ENST00000537934.5
CDS TCA 72 bp GGGGTCGCTCTCACCACCGCAATGTCAAAGCCCACTTaGTACTTCTTCAGGGCCTCAGAAGAAATGCTGTAT +
Preference number: 6 (lower is better)
Translates to: GVALTTAMSKPT*YFFRASEEMLY
Trigger: ATACAGCATTTCTTCTGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATTGCGGTGGTGAGAGCGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420670.5
ENST00000420681.6
ENST00000420987.5
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000464051.1
ENST00000482128.1
ENST00000537934.5
CDS TCA 72 bp ACCAACACTTTGGTGGCAATCCTACTACCTTCTGTCTaGACAACTGACAAGGTGGGGGCCACTACGGGCTTT +
Preference number: 6 (lower is better)
Translates to: TNTLVAILLPSV*TTDKVGATTGF
Trigger: AAAGCCCGTAGTGGCCCCCACCTTGTCAGTTGTTCAGACAGAAGGTAGTAGGATTGCCACCAAAGTGTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS TCA 72 bp AGAGCCAGCATAGACAAACCTGTTGCCCTGCGTGTATaGGACAGAGAAGAACTAGCATCAGGCAAGCAGGCA +
Preference number: 6 (lower is better)
Translates to: RASIDKPVALRV*DREELASGKQA
Trigger: TGCCTGCTTGCCTGATGCTAGTTCTTCTCTGTCTCATACACGCAGGGCAACAGGTTTGTCTATGCTGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486935.2
CDS GCA 72 bp ACTACGGGCTTTGGAACCACCTTCACTTCCAGGACGTaGTTGGCGACCACTTGGAAGACCGTTTTGTTCTTA +
Preference number: 6 (lower is better)
Translates to: TTGFGTTFTSRT*LATTWKTVLFL
Trigger: TAAGAACAAAACGGTCTTCCAAGTGGTCGCCAAGCACGTCCTGGAAGTGAAGGTGGTTCCAAAGCCCGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 72 bp CAATCCTACTACCTTCTGTCTGAACAACTGACAAGGTaGGGGCCACTACGGGCTTTGGAACCACCTTCACTT +
Preference number: 6 (lower is better)
Translates to: QSYYLLSEQLTR*GPLRALEPPSL
Trigger: AAGTGAAGGTGGTTCCAAAGCCCGTAGTGGCCCCCACCTTGTCAGTTGTTCAGACAGAAGGTAGTAGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 72 bp CTGGACTTAAGATACATGGTTTTCTCCGAGTGGAGCTaGGGGACCGTGTTGATGACGATCTTTGGTTCGCAG +
Preference number: 6 (lower is better)
Translates to: LDLRYMVFSEWS*GTVLMTIFGSQ
Trigger: CTGCGAACCAAAGATCGTCATCAACACGGTCCCCCAGCTCCACTCGGAGAAAACCATGTATCTTAAGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 72 bp TTCCACTATCTGGTGTTAGCAGAGTGGTGGCGCGTCTaGAGTCTGTCCCTTCTGATGTTCAGATGTGTTCAG +
Preference number: 6 (lower is better)
Translates to: FHYLVLAEWWRV*SLSLLMFRCVQ
Trigger: CTGAACACATCTGAACATCAGAAGGGACAGACTCCAGACGCGCCACCACTCTGCTAACACCAGATAGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429836.5
ENST00000438547.6
ENST00000537934.5
ENST00000540475.5
CDS CCA 72 bp CACATGGTTTCTTTCCACTATCTGGTGTTAGCAGAGTaGTGGCGCGTCTGGAGTCTGTCCCTTCTGATGTTC +
Preference number: 6 (lower is better)
Translates to: HMVSFHYLVLAE*WRVWSLSLLMF
Trigger: GAACATCAGAAGGGACAGACTCCAGACGCGCCACCACTCTGCTAACACCAGATAGTGGAAAGAAACCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429836.5
ENST00000438547.6
ENST00000537934.5
ENST00000540475.5
CDS CAA 72 bp AGGGGTCGCTCTCACCACCGCAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTCAGAAGAAATGCTGTA +
Preference number: 6 (lower is better)
Translates to: RGRSHHRNVKAH*ILLQGLRRNAV
Trigger: TACAGCATTTCTTCTGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATTGCGGTGGTGAGAGCGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420670.5
ENST00000420681.6
ENST00000420987.5
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000464051.1
ENST00000482128.1
ENST00000537934.5
CDS CAA 72 bp AGGGGTCGCTCTCACCACCGCAATGTCAAAGCCCACTaGATACTTCTTCAGGGCCTCAGAAGAAATGCAAAC +
Preference number: 6 (lower is better)
Translates to: RGRSHHRNVKAH*ILLQGLRRNAN
Trigger: GTTTGCATTTCTTCTGAGGCCCTGAAGAAGTATCAAGTGGGCTTTGACATTGCGGTGGTGAGAGCGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422704.7
ENST00000540475.5
CDS CAA 72 bp AGAGATGAGCCCCAGGACCCGACCAGGTGTACTTTCTaGCACAATAAGCCATTCCAGTTAGCAGAGTCTGTG +
Preference number: 6 (lower is better)
Translates to: RDEPQDPTRCTF*HNKPFQLAESV
Trigger: CACAGACTCTGCTAACTGGAATGGCTTATTGTGCAAGAAAGTACACCTGGTCGGGTCCTGGGGCTCATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS CAA 90 bp ACTAACGTCTCCTTCAGGCTCTGCTCACGGTCACAGAAATCTGACTaGGGCTTCTTCTTCCCAATTAGTAGGGCCGAGCGGAATTTCAAG +
Preference number: 6 (lower is better)
Translates to: TNVSFRLCSRSQKSD*GFFFPISRAERNFK
Trigger: CTTGAAATTCCGCTCGGCCCTACTAATTGGGAAGAAGAAGCCCAAGTCAGATTTCTGTGACCGTGAGCAGAGCCTGAAGGAGACGTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CAA 90 bp GCTGGTGCTAGAGATGAGCCCCAGGACCCGACCAGGTGTACTTTCTaGCACAATAAGCCATTCCAGTTAGCAGAGTCTGTGAACCAAAAA +
Preference number: 6 (lower is better)
Translates to: AGARDEPQDPTRCTF*HNKPFQLAESVNQK
Trigger: TTTTTGGTTCACAGACTCTGCTAACTGGAATGGCTTATTGTGCAAGAAAGTACACCTGGTCGGGTCCTGGGGCTCATCTCTAGCACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS TCA 72 bp GGTCCACCACGATCTGGGTGTAGTTCACATCTTTCTTaGTTAACCTGGGCCTGTTGTCTATTGGGGTTACCG +
Preference number: 6 (lower is better)
Translates to: GPPRSGCSSHLS*LTWACCLLGLP
Trigger: CGGTAACCCCAATAGACAACAGGCCCAGGTTAATCAAGAAAGATGTGAACTACACCCAGATCGTGGTGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000474258.1
ENST00000537934.5
CDS TCA 72 bp ACTAATTCCCACGACGGCCGTGGCCTTTCAAGAGTCTaGAACAAAGGGAAATGTCACAGAGCAGCTGGAACA +
Preference number: 6 (lower is better)
Translates to: TNSHDGRGLSRV*NKGKCHRAAGT
Trigger: TGTTCCAGCTGCTCTGTGACATTTCCCTTTGTTTCAGACTCTTGAAAGGCCACGGCCGTCGTGGGAATTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp ACCGAGTCATCCATCAAAGGGTGGTCTTTAACGAACTaGAGCGTCTTGTCTGGCAAATTCAAGGAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: TESSIKGWSLTN*SVLSGKFKELV
Trigger: CACCAGCTCCTTGAATTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCACCCTTTGATGGATGACTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000474258.1
ENST00000537934.5
CDS CCA 72 bp AGCCAAGGGATTGCATATTCTGTCCTCAGAGGACTGTaGGAAGAATTTCGGGAGATGATGGGTTCACTTCCC +
Preference number: 6 (lower is better)
Translates to: SQGIAYSVLRGL*EEFREMMGSLP
Trigger: GGGAAGTGAACCCATCATCTCCCGAAATTCTTCCCACAGTCCTCTGAGGACAGAATATGCAATCCCTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CCA 72 bp GAGAAGACCCTTGGGTGGATGCCACCAACACTTTGGTaGCAATCCTACTACCTTCTGTCTGAACAACTGACA +
Preference number: 6 (lower is better)
Translates to: EKTLGWMPPTLW*QSYYLLSEQLT
Trigger: TGTCAGTTGTTCAGACAGAAGGTAGTAGGATTGCCACCAAAGTGTTGGTGGCATCCACCCAAGGGTCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 72 bp TTGTCGCTGGACTTAAGATACATGGTTTTCTCCGAGTaGAGCTGGGGGACCGTGTTGATGACGATCTTTGGT +
Preference number: 6 (lower is better)
Translates to: LSLDLRYMVFSE*SWGTVLMTIFG
Trigger: ACCAAAGATCGTCATCAACACGGTCCCCCAGCTCCACTCGGAGAAAACCATGTATCTTAAGTCCAGCGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 72 bp TTGCAGTGTGGGAGATCAGTCTCAAGACAGGGATCGTaGGGTGCAGTAGCAGCACCAACAATTAGATCAAGA +
Preference number: 6 (lower is better)
Translates to: LQCGRSVSRQGS*GAVAAPTIRSR
Trigger: TCTTGATCTAATTGTTGGTGCTGCTACTGCACCCCACGATCCCTGTCTTGAGACTGATCTCCCACACTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450295.5
CDS CCA 72 bp TCCCACAAACCTCCCAGGTCACCTCGAGGGAGGCAATaGAACTACTCACGAAAGAATAATTGGATTTCCCAG +
Preference number: 6 (lower is better)
Translates to: SHKPPRSPRGRQ*NYSRKNNWISQ
Trigger: CTGGGAAATCCAATTATTCTTTCGTGAGTAGTTCCATTGCCTCCCTCGAGGTGACCTGGGAGGTTTGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474258.1
CDS CAA 72 bp AGAGATGAGCCCCAGGACCCGACCAGGTGTACTTTCTaGCACAATAAGCCATTCCAGTTAGCAGAGTCAAAC +
Preference number: 6 (lower is better)
Translates to: RDEPQDPTRCTF*HNKPFQLAESN
Trigger: GTTTGACTCTGCTAACTGGAATGGCTTATTGTGCAAGAAAGTACACCTGGTCGGGTCCTGGGGCTCATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000420987.5
ENST00000438547.6
ENST00000537934.5
CDS CAA 72 bp AGAGATGAGCCCCAGGACCCGACCAGGTGTACTTTCTaGCACAATAAGCCATTCCAGTTAGCAGAGTCTTTC +
Preference number: 6 (lower is better)
Translates to: RDEPQDPTRCTF*HNKPFQLAESF
Trigger: GAAAGACTCTGCTAACTGGAATGGCTTATTGTGCAAGAAAGTACACCTGGTCGGGTCCTGGGGCTCATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482128.1
CDS TCA 72 bp TCAGAGCTTCGTGGATGTGATTACAAAATATGGAGCTaGTTCTACTCTGCGACAAACCAGGTGCCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: SELRGCDYKIWS*FYSATNQVPSG
Trigger: CCCAGAGGGCACCTGGTTTGTCGCAGAGTAGAATCAGCTCCATATTTTGTAATCACATCCACGAAGCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS TCA 72 bp TGCCAGGACCACCATGGCTTCAGAGCTTCGTGGATGTaGTTACAAAATATGGAGCTGATTCTACTCTGCGAC +
Preference number: 6 (lower is better)
Translates to: CQDHHGFRASWM*LQNMELILLCD
Trigger: GTCGCAGAGTAGAATCAGCTCCATATTTTGTAATCACATCCACGAAGCTCTGAAGCCATGGTGGTCCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS CCA 72 bp ATTAGCTTTGAAAATGACACGGGTCTAAACTTGACATaGAAGATAGTCCTGGCAGAGGTGAAGGCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: ISFENDTGLNLT*KIVLAEVKAGP
Trigger: GGGCCCTGCCTTCACCTCTGCCAGGACTATCTTCCATGTCAAGTTTAGACCCGTGTCATTTTCAAAGCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp AGCAAACACGAAACTAGGCTCGTTCAGCCAAGGGATTaGATATTCTGTCCTCAGAGGACTGTGGGAAGAATT +
Preference number: 6 (lower is better)
Translates to: SKHETRLVQPRD*IFCPQRTVGRI
Trigger: AATTCTTCCCACAGTCCTCTGAGGACAGAATATGCAATCCCTTGGCTGAACGAGCCTAGTTTCGTGTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CCA 72 bp TTCTCCATCAACCATGACGGATGTGTAGCTGTGTGCTaGGTCAAAGGGACATCTTCCTTTGCCATCTTCATT +
Preference number: 6 (lower is better)
Translates to: FSINHDGCVAVC*VKGTSSFAIFI
Trigger: AATGAAGATGGCAAAGGAAGATGTCCCTTTGACCCAGCACACAGCTACACATCCGTCATGGTTGATGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000537934.5
CDS CCA 72 bp TTGTCTATTGGGGTTACCGAGTCATCCATCAAAGGGTaGTCTTTAACGAACTGCAGCGTCTTGTCTGGCAAA +
Preference number: 6 (lower is better)
Translates to: LSIGVTESSIKG*SLTNCSVLSGK
Trigger: TTTGCCAGACAAGACGCTGCAGTTCGTTAAAGACCACCCTTTGATGGATGACTCGGTAACCCCAATAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339861.8
ENST00000356444.6
ENST00000420987.5
ENST00000422704.7
ENST00000429836.5
ENST00000438547.6
ENST00000450295.5
ENST00000455551.6
ENST00000474258.1
ENST00000537934.5
CDS CCA 72 bp CAATTAGTAGGGCCGAGCGGAATTTCAAGCACTGTCTaGGCAGGTATCCCTTATAGCAGTTGTAGAAAAAGA +
Preference number: 6 (lower is better)
Translates to: QLVGPSGISSTV*AGIPYSSCRKR
Trigger: TCTTTTTCTACAACTGCTATAAGGGATACCTGCCCAGACAGTGCTTGAAATTCCGCTCGGCCCTACTAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
CDS CCA 72 bp CGAGGGAGGCAATGGAACTACTCACGAAAGAATAATTaGATTTCCCAGTTTTCCTACCAGAGGACACAGATG +
Preference number: 6 (lower is better)
Translates to: RGRQWNYSRKNN*ISQFSYQRTQM
Trigger: CATCTGTGTCCTCTGGTAGGAAAACTGGGAAATCCAATTATTCTTTCGTGAGTAGTTCCATTGCCTCCCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474258.1
CDS TCA 72 bp TTTGGGAGCATTTCAGTTCCGCTGTGCCACCGTGCTTaGAAAAATGCTGCCGGTAACTTCCTTTACTTTTAT +
Preference number: 6 (lower is better)
Translates to: FGSISVPLCHRA*KNAAGNFLYFY
Trigger: ATAAAAGTAAAGGAAGTTACCGGCAGCATTTTTTCAAGCACGGTGGCACAGCGGAACTGAAATGCTCCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356444.6
ENST00000422704.7
ENST00000438547.6
ENST00000450295.5
ENST00000486935.2
CDS CCA 72 bp AGGCACGTGGAATTATCCCAGATAACAGAAGAGACATaGATAGTTTCTGGTGAAGCTGCCTCATCTAACATG +
Preference number: 6 (lower is better)
Translates to: RHVELSQITEET*IVSGEAASSNM
Trigger: CATGTTAGATGAGGCAGCTTCACCAGAAACTATCCATGTCTCTTCTGTTATCTGGGATAATTCCACGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS TCA 72 bp CTGTTCTTACTGAAGGAAAAACAAGCACATCCATTTTaGTCTGCTTCGCACACTGGCTTCCACTCAAATGCA +
Preference number: 6 (lower is better)
Translates to: LFLLKEKQAHPF*SASHTGFHSNA
Trigger: TGCATTTGAGTGGAAGCCAGTGTGCGAAGCAGATCAAAATGGATGTGCTTGTTTTTCCTTCAGTAAGAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS GCA 72 bp CTTACTGAAGGAAAAACAAGCACATCCATTTTGATCTaGTTCGCACACTGGCTTCCACTCAAATGCAGAAAG +
Preference number: 6 (lower is better)
Translates to: LTEGKTSTSILI*FAHWLPLKCRK
Trigger: CTTTCTGCATTTGAGTGGAAGCCAGTGTGCGAAGCAGATCAAAATGGATGTGCTTGTTTTTCCTTCAGTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475255.5
CDS CAA 72 bp ACCATTATTAGCTTTGAAAATGACACGGGTCTAAACTaGACATGGAAGATAGTCCTGGCAGAGGTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: TIISFENDTGLN*TWKIVLAEVKA
Trigger: TGCCTTCACCTCTGCCAGGACTATCTTCCATGTCAAGTTTAGACCCGTGTCATTTTCAAAGCTAATAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469653.5
CDS GCA 72 bp AAACATAAAAGGCCATCCCAAATCCAAATATCTAAATaGTGCCTAAAGTATGGGGGAACCATTATTAGCTTT +
Preference number: 6 (lower is better)
Translates to: KHKRPSQIQISK*CLKYGGTIISF
Trigger: AAAGCTAATAATGGTTCCCCCATACTTTAGGCAGCATTTAGATATTTGGATTTGGGATGGCCTTTTATGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469653.5