RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEMA3F (Homo sapiens)

Ensembl gene IDs: ENSG00000001617

Ensembl transcript IDs: ENST00000002829.8, ENST00000413852.5, ENST00000414301.5, ENST00000420831.1, ENST00000426511.5, ENST00000434342.5, ENST00000450338.5, ENST00000470737.1, ENST00000493743.1

Found 517 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCAGCAGGTAGACTTCCAGCTGAGTCTGGGGACTGTGTGGTCCTaGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTG +
Preference number: 1 (lower is better)
Translates to: VQQVDFQLSLGTVWS*PGPTNWLGLVRQAL
Trigger: CAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGACCACACAGTCCCCAGACTCAGCTGGAAGTCTACCTGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR CCA 90 bp GAGGCTGTCCAGCAGGTAGACTTCCAGCTGAGTCTGGGGACTGTGTaGTCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAG +
Preference number: 1 (lower is better)
Translates to: EAVQQVDFQLSLGTV*SWPGPTNWLGLVRQ
Trigger: CTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGACCACACAGTCCCCAGACTCAGCTGGAAGTCTACCTGCTGGACAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR CCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTaGAGGATGCTGCCACTGAGGCAGGCTATATTCAACCCACCAATA +
Preference number: 1 (lower is better)
Translates to: QALFSAVSDQHGSKF*RMLPLRQAIFNPPI
Trigger: TATTGGTGGGTTGAATATAGCCTGCCTCAGTGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR GCA 90 bp GCCACTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTaGAGGGGCAGGGTGTGTATAGAATATAGATATTTTATATATATA +
Preference number: 1 (lower is better)
Translates to: ATEAGYIQPTNKYCL*RGRVCIEYRYFIYI
Trigger: TATATATATAAAATATCTATATTCTATACACACCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAGTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTACCCTCCCCTCAGAGCTaGGGCCTCCCGTCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: EVVDIREPWGASTGPRPLPSPQS*GLPSAL
Trigger: CAGAGCTGACGGGAGGCCCCAGCTCTGAGGGGAGGG...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAGGACAAGGGCTAGGCTaGCCCATGGCAGGCACAGGC +
Preference number: 2 (lower is better)
Translates to: EVVDIREPWGASTGPRPLGQGLG*PMAGTG
Trigger: GCCTGTGCCTGCCATGGGCCAGCCTAGCCCTTGTCC...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAGGGACTGTGTGGTCCTaGCCTGGCCCCACCAACTGG +
Preference number: 2 (lower is better)
Translates to: EVVDIREPWGASTGPRPLGTVWS*PGPTNW
Trigger: CCAGTTGGTGGGGCCAGGCCAGGACCACACAGTCCC...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAAGTCTGGGGACTGTGTaGTCCTGGCCTGGCCCCACC +
Preference number: 2 (lower is better)
Translates to: EVVDIREPWGASTGPRPLSLGTV*SWPGPT
Trigger: GGTGGGGCCAGGCCAGGACCACACAGTCCCCAGACT...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTACCCGTCAGCTCTGCCTaGGCCTGGCCCCTCTGCTAT +
Preference number: 2 (lower is better)
Translates to: EVVDIREPWGASTGPRPLPVSSA*AWPLCY
Trigger: ATAGCAGAGGGGCCAGGCCCAGGCAGAGCTGACGGG...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGATGTGTGGTCCTGGCCTaGCCCCACCAACTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRCVVLA*PHQLAG
Trigger: CCCAGCCAGTTGGTGGGGCCAGGCCAGGACCACACA...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTGGCCCCACCAACTaGCTGGGCCTGGTTAGGCAG +
Preference number: 2 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLPGPTN*LGLVRQ
Trigger: CTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGG...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGGGACTGTGTGGTCCTaGCCTGGCCCCACCAACTGG +
Preference number: 2 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLGTVWS*PGPTNW
Trigger: CCAGTTGGTGGGGCCAGGCCAGGACCACACAGTCCC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAGGACAAGGGCTAGGCTaGCCCATGGCAGGCACAGGC +
Preference number: 2 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPGQGLG*PMAGTG
Trigger: GCCTGTGCCTGCCATGGGCCAGCCTAGCCCTTGTCC...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAGCCCCACCAACTGGCTaGGCCTGGTTAGGCAGGCTC +
Preference number: 2 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPAPPTG*AWLGRL
Trigger: GAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGC...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCACCTGGCCCCACCAACTaGCTGGGCCTGGTTAGGCAG +
Preference number: 2 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPPGPTN*LGLVRQ
Trigger: CTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGG...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTGTGGTCCTGGCCTaGCCCCACCAACTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPCVVLA*PHQLAG
Trigger: CCCAGCCAGTTGGTGGGGCCAGGCCAGGACCACACA...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAAGTCTGGGGACTGTGTaGTCCTGGCCTGGCCCCACC +
Preference number: 2 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPSLGTV*SWPGPT
Trigger: GGTGGGGCCAGGCCAGGACCACACAGTCCCCAGACT...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTATTGTCCTGTAGATCTTaGCGGAGGCTGTCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: EVVDIREPWGASTGPRPLLSCRS*RRLSSR
Trigger: CCTGCTGGACAGCCTCCGCCAAGATCTACAGGACAA...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR TCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGGAGGATGCTGCCACTaGGGCAGGCTATATTCAACC +
Preference number: 2 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSGGCCH*GRLYST
Trigger: GGTTGAATATAGCCTGCCTCAGTGGCAGCATCCTCC...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR TCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCGGAGGATGCTGCCACTaGGGCAGGCTATATTCAACC +
Preference number: 2 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSGGCCH*GRLYST
Trigger: GGTTGAATATAGCCTGCCTCAGTGGCAGCATCCTCC...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACAGTCTGGGGACTGTGTaGTCCTGGCCTGGCCCCACC +
Preference number: 2 (lower is better)
Translates to: SLQSGPRIHVYATAQADNSLGTV*SWPGPT
Trigger: GGTGGGGCCAGGCCAGGACCACACAGTCCCCAGACT...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR GCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAAAGGTGGACAGTCCGTaGCCCATCCGAGTAGGGCTT +
Preference number: 2 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPKVDSP*PIRVGL
Trigger: AAGCCCTACTCGGATGGGGCACGGACTGTCCACCTT...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTCATGGGTCTAAGTTTTaGAGGATGCTGCCACTGAGG +
Preference number: 2 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSHGSKF*RMLPLR
Trigger: CCTCAGTGGCAGCATCCTCCAAAACTTAGACCCATG...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGGGACAAGGGCTAGGCTaGCCCATGGCAGGCACAGGC +
Preference number: 2 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGGQGLG*PMAGTG
Trigger: GCCTGTGCCTGCCATGGGCCAGCCTAGCCCTTGTCC...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACCCAACTGGCTGGGCCTaGTTAGGCAGGCTCTGTTTT +
Preference number: 2 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHPTGWA*LGRLCF
Trigger: AAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGCCCCACCAACTGGCTaGGCCTGGTTAGGCAGGCTC +
Preference number: 2 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKAPPTG*AWLGRL
Trigger: GAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGC...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAACCTGGCCCCACCAACTaGCTGGGCCTGGTTAGGCAG +
Preference number: 2 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKPGPTN*LGLVRQ
Trigger: CTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGG...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAGGGACTGTGTGGTCCTaGCCTGGCCCCACCAACTGG +
Preference number: 2 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGGTVWS*PGPTNW
Trigger: CCAGTTGGTGGGGCCAGGCCAGGACCACACAGTCCC...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR GCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAAATAAATACTGTCTTTaGAGGGGCAGGGTGTGTATA +
Preference number: 2 (lower is better)
Translates to: EVVDIREPWGASTGPRPLNKYCL*RGRVCI
Trigger: TATACACACCCTGCCCCTGCAAAGACAGTATTTATT...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR GCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTAATAAATACTGTCTTTaGAGGGGCAGGGTGTGTATA +
Preference number: 2 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSNKYCL*RGRVCI
Trigger: TATACACACCCTGCCCCTGCAAAGACAGTATTTATT...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR TCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGAGGATGCTGCCACTaGGGCAGGCTATATTCAACC +
Preference number: 2 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKGGCCH*GRLYST
Trigger: GGTTGAATATAGCCTGCCTCAGTGGCAGCATCCTCC...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR GCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAACATCCGAGTAGGGCTTaGTCCCTCCCTTTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKHPSRA*SLPLSC
Trigger: ACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATG...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR GCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGACATCCGAGTAGGGCTTaGTCCCTCCCTTTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGHPSRA*SLPLSC
Trigger: ACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATG...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR-3UTR CCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGATTGTCCTGTAGATCTTaGCGGAGGCTGTCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGLSCRS*RRLSSR
Trigger: CCTGCTGGACAGCCTCCGCCAAGATCTACAGGACAA...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR CCA 72 bp CACCCATCCCCTGAAGTGGTGGACATAAGGGAGCCCTaGGGAGCCTCTACCGGCCCCAGGCCTCTACCACGG +
Preference number: 3 (lower is better)
Translates to: HPSPEVVDIREP*GASTGPRPLPR
Trigger: CCGTGGTAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTCAGGGGATGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR CCA 72 bp CAGCAGGTAGACTTCCAGCTGAGTCTGGGGACTGTGTaGTCCTGGCCTGGCCCCACCAACTGGCTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: QQVDFQLSLGTV*SWPGPTNWLGL
Trigger: CAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGACCACACAGTCCCCAGACTCAGCTGGAAGTCTACCTGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR CCA 72 bp TGTGGTCCTGGCCTGGCCCCACCAACTGGCTGGGCCTaGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACC +
Preference number: 3 (lower is better)
Translates to: CGPGLAPPTGWA*LGRLCFLPSLT
Trigger: GGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR CCA 72 bp GTAGACTTCCAGCTGAGTCTGGGGACTGTGTGGTCCTaGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGG +
Preference number: 3 (lower is better)
Translates to: VDFQLSLGTVWS*PGPTNWLGLVR
Trigger: CCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGACCACACAGTCCCCAGACTCAGCTGGAAGTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
3UTR CCA 72 bp CTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTaGTCCTCGCATCCATGTCTATGCCACAGCACAGGC +
Preference number: 3 (lower is better)
Translates to: LCVLLRPPQSPK*SSHPCLCHSTG
Trigger: GCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTATACACCGCGGGGCTCTaGGGCGCCTCTGCCGACCGC +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLYTAGL*GASADR
Trigger: GCGGTCGGCAGAGGCGCCGCAGAGCCCCGCGGTGTA...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCTCCCGTCAGCTCTaGCTGGGCCTGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSASRQL*LGLAPL
Trigger: CAGAGGGGCCAGGCCCAGGCAGAGCTGACGGGAGGC...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTCTGGTAAGGAGGCGTTaGGGGGCCTGCGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSLVRRR*GACAWG
Trigger: CCCCCAGGCGCAGGCCCCCCAACGCCTCCTTACCAG...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCACCAGGGGCCGCCGCTaGAGAGGGTACACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSTRGRR*RGYTAW
Trigger: CCAGGCCGTGTACCCTCTGCAGCGGCGGCCCCTGGT...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCAGAGTGGGGTGGCCCTaGCCTGGCCAGGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLRVGWP*PGQAGR
Trigger: CCTCCCCGCCTGGCCAGGGCAGGGCCACCCCACTCT...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTGGCGTGGGGCTGTaGGCATCGGGCGGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLPGVGL*ASGGGH
Trigger: GTGCCCTCCGCCCGATGCCCACAGCCCCACGCCAGG...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGACTGGTAAGGAGGCGTTaGGGGGCCTGCGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRLVRRR*GACAWG
Trigger: CCCCCAGGCGCAGGCCCCCCAACGCCTCCTTACCAG...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCGAGCCTCCCTGGGGCTaGGGGGCACATGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSEPPWG*GAHGAS
Trigger: ACTGGCGCCATGTGCCCCCCAGCCCCAGGGAGGCTC...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTACCTGGCCCCACCAACTaGCTGGGCCTGGTTAGGCAG +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLPGPTN*LGLVRQ
Trigger: CTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGG...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCACGCATTCCTCGATaGGCTGTGGGGAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSARIPR*AVGRLP
Trigger: GGGCAGCCTCCCCACAGCGCATCGAGGAATGCGTGC...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATACACCGCGGGGCTCTaGGGCGCCTCTGCCGACCGC +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPYTAGL*GASADR
Trigger: GCGGTCGGCAGAGGCGCCGCAGAGCCCCGCGGTGTA...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCGGTAGGGAGCACCTGTaGGGACTACCAGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSGREHL*GLPGAA
Trigger: GGCGGCCCCTGGTAGTCCGCACAGGTGCTCCCTACC...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAGTGTCCGGAGGGTGGTaGCGGCGGTTCCGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRVSGGW*RRFRGF
Trigger: AAAGCCCCGGAACCGCCGGCACCACCCTCCGGACAC...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAAGAGTGGGGTGGCCCTaGCCTGGCCAGGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPRVGWP*PGQAGR
Trigger: CCTCCCCGCCTGGCCAGGGCAGGGCCACCCCACTCT...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGAGTGGGGTGGCCCTaGCCTGGCCAGGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHRVGWP*PGQAGR
Trigger: CCTCCCCGCCTGGCCAGGGCAGGGCCACCCCACTCT...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGATGGGGCGAGCGGGGCTaGCACTCAAGGAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRWGERG*HSRKAA
Trigger: CGCAGCCTTCCTTGAGTGCCAGCCCCGCTCGCCCCA...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACGCCTGCGCCTGGGGGTaGCGGGGCGCTCATGGACAG +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHACAWG*RGAHGQ
Trigger: CTGTCCATGAGCGCCCCGCCACCCCCAGGCGCAGGC...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGAGCCTCCCTGGGGCTaGGGGGCACATGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLEPPWG*GAHGAS
Trigger: ACTGGCGCCATGTGCCCCCCAGCCCCAGGGAGGCTC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGGACAAGGGCTAGGCTaGCCCATGGCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSGQGLG*PMAGTG
Trigger: GCCTGTGCCTGCCATGGGCCAGCCTAGCCCTTGTCC...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTTGTGTGGTCCTGGCCTaGCCCCACCAACTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSCVVLA*PHQLAG
Trigger: CCCAGCCAGTTGGTGGGGCCAGGCCAGGACCACACA...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTAGTCTGGGGACTGTGTaGTCCTGGCCTGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSSLGTV*SWPGPT
Trigger: GGTGGGGCCAGGCCAGGACCACACAGTCCCCAGACT...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAAACCCAGGCAGGGGCTaGCATCCTGTGATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLNPGRG*HPVMAP
Trigger: AGGGGCCATCACAGGATGCCAGCCCCTGCCTGGGTT...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTTACCCAGGAAGGGGCTaGTCGTGGCTGAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSYPGRG*SWLSAP
Trigger: GGGGGCACTCAGCCACGACCAGCCCCTTCCTGGGTA...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTACTTCAGCTCTTTGAATaGGAGCCGGACCCGGGGCGT +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLLQLFE*EPDPGR
Trigger: ACGCCCCGGGTCCGGCTCTCATTCAAAGAGCTGAAG...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGACGGCCTCTGACCGCCTaGGTCTGGGTCCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRRPLTA*VWVHGV
Trigger: CACACCATGGACCCAGACTCAGGCGGTCAGAGGCCG...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS-3UTR TCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACTGCTGCCGCGGCCTCTaGCCGCCTGAGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHCCRGL*PPESGS
Trigger: GGACCCAGACTCAGGCGGTCAGAGGCCGCGGCAGCA...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS-3UTR TCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAACCCACGGCACTGCCTaGTGGGGTTTCCGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRTHGTA*WGFRAG
Trigger: TCCGGCACGGAAACCCCATCAGGCAGTGCCGTGGGT...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCACCCACGGCACTGCCTaGTGGGGTTTCCGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSTHGTA*WGFRAG
Trigger: TCCGGCACGGAAACCCCATCAGGCAGTGCCGTGGGT...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCGCTCTGCGGCGCCTCTaGCGACCGCTCACGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSALRRL*RPLTEE
Trigger: TTCTTCCGTGAGCGGTCGGCAGAGGCGCCGCAGAGC...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTATACGCCTGGCAGCGGTaGAGGCTCAGGTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLYAWQR*RLRCVT
Trigger: TGTCACACACCTGAGCCTGCACCGCTGCCAGGCGTA...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTACCGCCTCTTGGAGGATaGTGTATAGCGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLPPLGG*CIAGAG
Trigger: GCCTGCTCCCGCTATACAGCATCCTCCAAGAGGCGG...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAGATAGGGTGCATCCCTaGCTGCTCCAGCCACAGGTC +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLDRVHP*LLQPQV
Trigger: GACCTGTGGCTGGAGCAGGCAGGGATGCACCCTATC...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGCCGGGAGGTGGTCCTaGGTGGGGAAGGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLAGRWS*VGKDGQ
Trigger: CTGGCCATCCTTCCCCACCCAGGACCACCTCCCGGC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000002829.8
ENST00000434342.5
CDS-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCTGGGGCGAGCGGGGCTaGCACTCAAGGAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLWGERG*HSRKAA
Trigger: CGCAGCCTTCCTTGAGTGCCAGCCCCGCTCGCCCCA...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCGCAGGCACAGGCAGCTaGCCTCATGTGTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSAGTGS*PHVSGG
Trigger: CCCTCCGGACACATGAGGCCAGCTGCCTGTGCCTGC...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAGGACAAGGGCTAGGCTaGCCCATGGCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRGQGLG*PMAGTG
Trigger: GCCTGTGCCTGCCATGGGCCAGCCTAGCCCTTGTCC...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAGCCCCACCAACTGGCTaGGCCTGGTTAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRAPPTG*AWLGRL
Trigger: GAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGC...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCGGGACTGTGTGGTCCTaGCCTGGCCCCACCAACTGG +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSGTVWS*PGPTNW
Trigger: CCAGTTGGTGGGGCCAGGCCAGGACCACACAGTCCC...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTAACCCAGGCAGGGGCTaGCATCCTGTGATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSNPGRG*HPVMAP
Trigger: AGGGGCCATCACAGGATGCCAGCCCCTGCCTGGGTT...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTATCCCACACTCGCCGTTaGCATCCTTGCCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLSHTRR*HPCLRA
Trigger: TGCTCTCAGGCAAGGATGTCAACGGCGAGTGTGGGA...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTCACCGGGAGTTGTACTaGTCCGTGCGCATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSHRELY*SVRMAV
Trigger: GACAGCCATGCGCACGGATCAGTACAACTCCCGGTG...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTCCACCTCCTCCAGCATaGGCTCCTCCAACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSPPPPA*APPTPG
Trigger: ACCAGGAGTTGGAGGAGCTCATGCTGGAGGAGGTGG...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCGGCAGTACTGGTGGATaGGGCCCACTTCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSGSTGG*GPLLAG
Trigger: CCCAGCCAGAAGTGGGCCTCATCCACCAGTACTGCC...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAGGCAGTACTGGTGGATaGGGCCCACTTCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRGSTGG*GPLLAG
Trigger: CCCAGCCAGAAGTGGGCCTCATCCACCAGTACTGCC...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCGGGGCTGGCATCCTGTaGTGGCCCCTTCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSGAGIL*WPLLPF
Trigger: GAAGGGAAGAAGGGGCCATCACAGGATGCCAGCCCC...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTTGCTGCCCACGTACATaGGGTCGTGGTCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSCCPRT*GRGPRP
Trigger: AGGACGAGGACCACGACCGCATGTACGTGGGCAGCA...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTACATCGTTCAGGCAAATaGGCCCGATGCGGGCGTACA +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLHRSGK*ARCGRT
Trigger: TGTACGCCCGCATCGGGCGCATTTGCCTGAACGATG...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACCAGGGGCCGCCGCTaGAGAGGGTACACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTTRGRR*RGYTAW
Trigger: CCAGGCCGTGTACCCTCTGCAGCGGCGGCCCCTGGT...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTATTGAACCCACGGCACTaGCTGATGGGGTTTCCGTGC +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLLNPRH*LMGFPC
Trigger: GCACGGAAACCCCATCAGGCAGTGCCGTGGGTTCAA...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCCAGGAAGCGGTCCTCTaGACGAATCTCTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSQEAVL*TNLSAP
Trigger: CGGCGCCGAGAGATTCGTGCAGAGGACCGCTTCCTG...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGACGGAGCAACAAGCCCTaGTCTGTGCGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRRSNKP*SVRRKR
Trigger: CCGCTTCCTGCGCACAGAGCAGGGCTTGTTGCTCCG...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTACCACGATCGCTGAGCTaGAGTGCACGGAGCAACAAG +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLPRSLS*SARSNK
Trigger: CTTGTTGCTCCGTGCACTGCAGCTCAGCGATCGTGG...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACCTGGTCGTGGCTGAGTaGCCCCAACCCAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHLVVAE*PQPRQG
Trigger: CCCCTGCCTGGGTTGGGGGCACTCAGCCACGACCAG...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAGCCTCCCGTCAGCTCTaGCTGGGCCTGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTASRQL*LGLAPL
Trigger: CAGAGGGGCCAGGCCCAGGCAGAGCTGACGGGAGGC...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAGCCGGGAGGTGGTCCTaGGTGGGGAAGGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPAGRWS*VGKDGQ
Trigger: CTGGCCATCCTTCCCCACCCAGGACCACCTCCCGGC...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000002829.8
ENST00000434342.5
CDS-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACGGCGTGGCCGGGAGGTaGTCCTGGGTGGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHGVAGR*SWVGKD
Trigger: ATCCTTCCCCACCCAGGACCACCTCCCGGCCACGCC...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000002829.8
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAGGAGGGCACCATCCGTaGCTCTGCTGCCGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTGGHHP*LCCRGL
Trigger: GAGGCCGCGGCAGCAGAGCCACGGATGGTGCCCTCC...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAGATGTAATCCTGGCGTaGGGCTGTGGGCATCGGGCG +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRDVILA*GCGHRA
Trigger: CGCCCGATGCCCACAGCCCCACGCCAGGATTACATC...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGACACTTAACAGTGGCTTaGGGCGAGCGGGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRHLTVA*GERGWH
Trigger: GTGCCAGCCCCGCTCGCCCCAAGCCACTGTTAAGTG...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAGGGAAGAGGGCAGCATaGACGGCGTCCCGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPGKRAA*TASRPS
Trigger: ACTGGGCCGGGACGCCGTCCATGCTGCCCTCTTCCC...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGTGGCGGGGCGCTCATaGACAGTGGTGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLVAGRS*TVVGRG
Trigger: CCCTCTTCCCACCACTGTCCATGAGCGCCCCGCCAC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTCCCTGGCAGTACTGGTaGATGAGGCCCACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSPWQYW*MRPTSG
Trigger: GCCAGAAGTGGGCCTCATCCACCAGTACTGCCAGGG...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGACTTCAGCTCTTTGAATaGGAGCCGGACCCGGGGCGT +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRLQLFE*EPDPGR
Trigger: ACGCCCCGGGTCCGGCTCTCATTCAAAGAGCTGAAG...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTCGTGGTCCTCGTCCTTaGGCAAGATTCGGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSRGPRP*ARFGSR
Trigger: CCGACTACCGAATCTTGCTCAAGGACGAGGACCACG...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACGGGGCTGGTCGTGGCTaGGTGCCCCCAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNGAGRG*VPPTQA
Trigger: TGCCTGGGTTGGGGGCACTCAGCCACGACCAGCCCC...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAGATCGTACGGACACTTaGCCTTCCCTGACTCGAGTC +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLDRTDT*PSLTRV
Trigger: GACTCGAGTCAGGGAAGGGCAAGTGTCCGTACGATC...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGTACACCGCGGGGCTCTaGGGCGCCTCTGCCGACCGC +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMYTAGL*GASADR
Trigger: GCGGTCGGCAGAGGCGCCGCAGAGCCCCGCGGTGTA...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACGGCAAATGCGCCCGATaGGGGCGTACACCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNGKCAR*GRTPRG
Trigger: GCCCCGCGGTGTACGCCCGCATCGGGCGCATTTGCC...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTCTCACGTCCTGGGTCTaGTGGACAAACACGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSLTSWV*WTNTSW
Trigger: CCAGGACGTGTTTGTCCAGCAGACCCAGGACGTGAG...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCTACGCCTGGCAGCGGTaGAGGCTCAGGTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSYAWQR*RLRCVT
Trigger: TGTCACACACCTGAGCCTGCACCGCTGCCAGGCGTA...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCCCGCCTCTTGGAGGATaGTGTATAGCGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSPPLGG*CIAGAG
Trigger: GCCTGCTCCCGCTATACAGCATCCTCCAAGAGGCGG...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCCGTGCCGGACGTCCTaGCGGCGGCTCCGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMPCRTS*RRLRLL
Trigger: CAAGAGGCGGAGCCGCCGGCAGGACGTCCGGCACGG...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCACCGTGCCGGACGTCCTaGCGGCGGCTCCGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPPCRTS*RRLRLL
Trigger: CAAGAGGCGGAGCCGCCGGCAGGACGTCCGGCACGG...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCAAGGAAGGCTGCGCTaGCGGCCACGCCATACTGCA +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLQGRLR*RPRHTA
Trigger: TGCAGTATGGCGTGGCCGGCAGCGCAGCCTTCCTTG...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCAGGAAGCGGTCCTCTaGACGAATCTCTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLQEAVL*TNLSAP
Trigger: CGGCGCCGAGAGATTCGTGCAGAGGACCGCTTCCTG...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAACAAGCCCTGCTCTGTaGGCAGGAAGCGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRTSPAL*AGSGPL
Trigger: CAGAGGACCGCTTCCTGCGCACAGAGCAGGGCTTGT...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAGGGTGCATCCCTGCCTaGTCCAGCCACAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRGCIPA*SSHRSS
Trigger: AGAAGACCTGTGGCTGGAGCAGGCAGGGATGCACCC...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS-3UTR GCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAGGGGAACAGATAGGGTaGATCCCTGCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRGEQIG*IPACSS
Trigger: GCTGGAGCAGGCAGGGATGCACCCTATCTGTTCCCC...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS-3UTR CCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACGTCCATGGTGTGGCCTaGGCGCGGCGTCCGCGGTTC +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNVHGVA*ARRPRF
Trigger: GAACCGCGGACGCCGCGCCCAGGCCACACCATGGAC...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS-3UTR CCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAAGCTCCTCCAACTCCTaGTCATCCTTGGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLSSSNS*SSLGST
Trigger: TGTGCTGCCCAAGGATGACCAGGAGTTGGAGGAGCT...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGGCGGCTCCGCCTCTTaGAGGATGCTGTATAGCGGG +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLGGSAS*RMLYSG
Trigger: CCCGCTATACAGCATCCTCCAAGAGGCGGAGCCGCC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAGGCGCTCATGGACAGTaGTGGGAAGAGGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRGAHGQ*WEEGSM
Trigger: CATGCTGCCCTCTTCCCACCACTGTCCATGAGCGCC...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAGTGGCGGGGCGCTCATaGACAGTGGTGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPVAGRS*TVVGRG
Trigger: CCCTCTTCCCACCACTGTCCATGAGCGCCCCGCCAC...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAGCCTGCGCCTGGGGGTaGCGGGGCGCTCATGGACAG +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPACAWG*RGAHGQ
Trigger: CTGTCCATGAGCGCCCCGCCACCCCCAGGCGCAGGC...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACCATGTGTCCGGAGGGTaGTGCCGGCGGTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNHVSGG*CRRFRG
Trigger: GCCCCGGAACCGCCGGCACCACCCTCCGGACACATG...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACGCAGGCACAGGCAGCTaGCCTCATGTGTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHAGTGS*PHVSGG
Trigger: CCCTCCGGACACATGAGGCCAGCTGCCTGTGCCTGC...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACGGGACTGTGTGGTCCTaGCCTGGCCCCACCAACTGG +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHGTVWS*PGPTNW
Trigger: CCAGTTGGTGGGGCCAGGCCAGGACCACACAGTCCC...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACACCCTCCCCTCAGAGCTaGGGCCTCCCGTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTPSPQS*GLPSAL
Trigger: CAGAGCTGACGGGAGGCCCCAGCTCTGAGGGGAGGG...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACGACATAAGGGAGCCCTaGGGAGCCTCTACCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHDIREP*GASTGP
Trigger: GGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTC...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCCGTGGTCCTCGTCCTTaGGCAAGATTCGGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSRGPRP*ARFGSR
Trigger: CCGACTACCGAATCTTGCTCAAGGACGAGGACCACG...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAGTTGACATCCTTGCCTaGGAGCACGCATTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLVDILA*EHAFLD
Trigger: ATCGAGGAATGCGTGCTCTCAGGCAAGGATGTCAAC...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCACCTCCTCCAGCATaGGCTCCTCCAACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLPPPPA*APPTPG
Trigger: ACCAGGAGTTGGAGGAGCTCATGCTGGAGGAGGTGG...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCGGGTGCTGGATCCTTaGAGACCTCCACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLRVLDP*RPPPPP
Trigger: TGGAGGAGGTGGAGGTCTTCAAGGATCCAGCACCCG...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCTGCTGCCCACGTACATaGGGTCGTGGTCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLCCPRT*GRGPRP
Trigger: AGGACGAGGACCACGACCGCATGTACGTGGGCAGCA...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTCGCGGTTCACATAGGTaGACATGGGGTTGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSRGSHR*TWGCRH
Trigger: GTGCCTACAACCCCATGTGCACCTATGTGAACCGCG...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAGCTCTGCGGCGCCTCTaGCGACCGCTCACGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTALRRL*RPLTEE
Trigger: TTCTTCCGTGAGCGGTCGGCAGAGGCGCCGCAGAGC...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTCAAAGTGAGTCTCAATaGCATCCTCGCCCGGGACAG +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSQSESQ*HPRPGQ
Trigger: CTGTCCCGGGCGAGGATGGCATTGAGACTCACTTTG...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCCTCACGTCCTGGGTCTaGTGGACAAACACGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSLTSWV*WTNTSW
Trigger: CCAGGACGTGTTTGTCCAGCAGACCCAGGACGTGAG...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTACATGGTCTTGACGGGTaGTGGATCCTTGAAGACCTC +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLHGLDG*WILEDL
Trigger: GAGGTCTTCAAGGATCCAGCACCCGTCAAGACCATG...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAACCGTGCCGGACGTCCTaGCGGCGGCTCCGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKPCRTS*RRLRLL
Trigger: CAAGAGGCGGAGCCGCCGGCAGGACGTCCGGCACGG...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACCAGGAAGCGGTCCTCTaGACGAATCTCTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHQEAVL*TNLSAP
Trigger: CGGCGCCGAGAGATTCGTGCAGAGGACCGCTTCCTG...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACCGGAGCAACAAGCCCTaGTCTGTGCGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHRSNKP*SVRRKR
Trigger: CCGCTTCCTGCGCACAGAGCAGGGCTTGTTGCTCCG...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACGTGTCCGGAGGGTGGTaGCGGCGGTTCCGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNVSGGW*RRFRGF
Trigger: AAAGCCCCGGAACCGCCGGCACCACCCTCCGGACAC...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAGCCTCCCGTCAGCTCTaGCTGGGCCTGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPASRQL*LGLAPL
Trigger: CAGAGGGGCCAGGCCCAGGCAGAGCTGACGGGAGGC...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTACGTACATGCGGTCGTaGTCCTCGTCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSTYMRS*SSSLSK
Trigger: CTTGCTCAAGGACGAGGACCACGACCGCATGTACGT...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCTTCCTCGATGCGCTGTaGGGAGGCTGCCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSFLDAL*GGCPVY
Trigger: ATACACTGGGCAGCCTCCCCACAGCGCATCGAGGAA...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGATTCCTCGATGCGCTGTaGGGAGGCTGCCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRFLDAL*GGCPVY
Trigger: ATACACTGGGCAGCCTCCCCACAGCGCATCGAGGAA...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGTCTGGGTCCATGGTGTaGCCTGGGCGCGGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMSGSMV*PGRGVR
Trigger: GCGGACGCCGCGCCCAGGCCACACCATGGACCCAGA...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS-3UTR CCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAGGAATGAGCTCAGCATaGATGAACGACGGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLGMSSA*MNDGSF
Trigger: GAACGACCCGTCGTTCATCCATGCTGAGCTCATTCC...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGGCCTGGTACATGAGTaGGTGGCTGCGCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSGLVHE*VAAHEV
Trigger: AACTTCATGCGCAGCCACCCACTCATGTACCAGGCC...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAAGAGGGTACACGGCCTaGTACATGAGTGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRRGYTA*YMSGWL
Trigger: CAGCCACCCACTCATGTACCAGGCCGTGTACCCTCT...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACGCAGCCCCATACGCCTaGCAGCGGTGCAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNAAPYA*QRCRLR
Trigger: CCTGAGCCTGCACCGCTGCCAGGCGTATGGGGCTGC...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACGGCGGCTCCGCCTCTTaGAGGATGCTGTATAGCGGG +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHGGSAS*RMLYSG
Trigger: CCCGCTATACAGCATCCTCCAAGAGGCGGAGCCGCC...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGGCGCTCATGGACAGTaGTGGGAAGAGGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLGAHGQ*WEEGSM
Trigger: CATGCTGCCCTCTTCCCACCACTGTCCATGAGCGCC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAGTGGCGGGGCGCTCATaGACAGTGGTGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTVAGRS*TVVGRG
Trigger: CCCTCTTCCCACCACTGTCCATGAGCGCCCCGCCAC...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGGCCTGCGCCTGGGGGTaGCGGGGCGCTCATGGACAG +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGACAWG*RGAHGQ
Trigger: CTGTCCATGAGCGCCCCGCCACCCCCAGGCGCAGGC...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAAGTCTGGGGACTGTGTaGTCCTGGCCTGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTSLGTV*SWPGPT
Trigger: GGTGGGGCCAGGCCAGGACCACACAGTCCCCAGACT...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACACCCGTCAGCTCTGCCTaGGCCTGGCCCCTCTGCTAT +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTPVSSA*AWPLCY
Trigger: ATAGCAGAGGGGCCAGGCCCAGGCAGAGCTGACGGG...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGGCCTTCAGCTCTTTaGATGAGAGCCGGACCCGGG +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPWPSAL*MRAGPG
Trigger: CCCGGGTCCGGCTCTCATTCAAAGAGCTGAAGGCCA...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAGGGCAAAGGGCCCGTTaGAGACCATGCGAATATCAG +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRGQRAR*RPCEYQ
Trigger: CTGATATTCGCATGGTCTTCAACGGGCCCTTTGCCC...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACCGGGTGCTGGATCCTTaGAGACCTCCACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHRVLDP*RPPPPP
Trigger: TGGAGGAGGTGGAGGTCTTCAAGGATCCAGCACCCG...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACGCAGGCTCAGGTGTGTaGCACCCACGGCTGACGCCA +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNAGSGV*HPRLTP
Trigger: TGGCGTCAGCCGTGGGTGTCACACACCTGAGCCTGC...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACCCACGGCACTGCCTaGTGGGGTTTCCGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNTHGTA*WGFRAG
Trigger: TCCGGCACGGAAACCCCATCAGGCAGTGCCGTGGGT...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGGGCTGGTCGTGGCTaGGTGCCCCCAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKGAGRG*VPPTQA
Trigger: TGCCTGGGTTGGGGGCACTCAGCCACGACCAGCCCC...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCTCCACACCCATCCCCTaGAGTGGTGGACATAAGGGA +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSSTPIP*SGGHKG
Trigger: TCCCTTATGTCCACCACTTCAGGGGATGGGTGTGGA...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGATCCACACCCATCCCCTaGAGTGGTGGACATAAGGGA +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRSTPIP*SGGHKG
Trigger: TCCCTTATGTCCACCACTTCAGGGGATGGGTGTGGA...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACGCACGCATTCCTCGATaGGCTGTGGGGAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNARIPR*AVGRLP
Trigger: GGGCAGCCTCCCCACAGCGCATCGAGGAATGCGTGC...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCCGCGGTTCACATAGGTaGACATGGGGTTGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSRGSHR*TWGCRH
Trigger: GTGCCTACAACCCCATGTGCACCTATGTGAACCGCG...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGGGCAAATGCGCCCGATaGGGGCGTACACCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGGKCAR*GRTPRG
Trigger: GCCCCGCGGTGTACGCCCGCATCGGGCGCATTTGCC...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAGGCAAATGCGCCCGATaGGGGCGTACACCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGGKCAR*GRTPRG
Trigger: GCCCCGCGGTGTACGCCCGCATCGGGCGCATTTGCC...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGGGTAGGGAGCACCTGTaGGGACTACCAGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMGREHL*GLPGAA
Trigger: GGCGGCCCCTGGTAGTCCGCACAGGTGCTCCCTACC...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACATAGCGCCCGTCGGCTaGATCCACCTGGTCCACGGC +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNIAPVG*IHLVHG
Trigger: GCCGTGGACCAGGTGGATGCAGCCGACGGGCGCTAT...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACCCGGCCACGCCATACTaGACAGACTCCACGGCATTC +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHPATPY*TDSTAF
Trigger: GAATGCCGTGGAGTCTGTGCAGTATGGCGTGGCCGG...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAACAAGCCCTGCTCTGTaGGCAGGAAGCGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPTSPAL*AGSGPL
Trigger: CAGAGGACCGCTTCCTGCGCACAGAGCAGGGCTTGT...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGGTGTCCGGAGGGTGGTaGCGGCGGTTCCGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMVSGGW*RRFRGF
Trigger: AAAGCCCCGGAACCGCCGGCACCACCCTCCGGACAC...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAATCCCAGGTCCTGCGCTaGGCTCGGGGCTCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKSQVLR*ARGSPD
Trigger: GTCCGGAGAGCCCCGAGCGCAGCGCAGGACCTGGGA...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413852.5
CDS-3UTR CCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCGTTCGGTTCCAGGGCTaGATGAGCCTGACGAAGTTC +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSVRFQG*MSLTKF
Trigger: GAACTTCGTCAGGCTCATCCAGCCCTGGAACCGAAC...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTTCACATAGGTGCACATaGGGTTGTAGGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSSHRCT*GCRHLS
Trigger: GGACAGGTGCCTACAACCCCATGTGCACCTATGTGA...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTATGCTGTGTCCAGCTTaGGATCGTACGGACACTTGC +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSMLCPA*DRTDTC
Trigger: GCAAGTGTCCGTACGATCCCAAGCTGGACACAGCAT...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGGGTTCCTCACGTCCTaGGTCTGCTGGACAAACACG +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLGFLTS*VCWTNT
Trigger: CGTGTTTGTCCAGCAGACCCAGGACGTGAGGAACCC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCGGCCTGGTACATGAGTaGGTGGCTGCGCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSGLVHE*VAAHEV
Trigger: AACTTCATGCGCAGCCACCCACTCATGTACCAGGCC...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGGCAGCCCCATACGCCTaGCAGCGGTGCAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMAAPYA*QRCRLR
Trigger: CCTGAGCCTGCACCGCTGCCAGGCGTATGGGGCTGC...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAGGCGGCTCCGCCTCTTaGAGGATGCTGTATAGCGGG +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTGGSAS*RMLYSG
Trigger: CCCGCTATACAGCATCCTCCAAGAGGCGGAGCCGCC...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGGGGAAGAGGGCAGCATaGACGGCGTCCCGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMGKRAA*TASRPS
Trigger: ACTGGGCCGGGACGCCGTCCATGCTGCCCTCTTCCC...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAACTGGTAAGGAGGCGTTaGGGGGCCTGCGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKLVRRR*GACAWG
Trigger: CCCCCAGGCGCAGGCCCCCCAACGCCTCCTTACCAG...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGGAGCCTCCCTGGGGCTaGGGGGCACATGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGEPPWG*GAHGAS
Trigger: ACTGGCGCCATGTGCCCCCCAGCCCCAGGGAGGCTC...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACGGCTTTTTCTGGTCCTaGGGCTCAGGAGACCGGGGT +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHGFFWS*GSGDRG
Trigger: ACCCCGGTCTCCTGAGCCCCAGGACCAGAAAAAGCC...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGCATGTGTCCGGAGGGTaGTGCCGGCGGTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGHVSGG*CRRFRG
Trigger: GCCCCGGAACCGCCGGCACCACCCTCCGGACACATG...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCTTGTCCTGTAGATCTTaGCGGAGGCTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSLSCRS*RRLSSR
Trigger: CCTGCTGGACAGCCTCCGCCAAGATCTACAGGACAA...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTACACATCAGAAAAGGTaGACAGTCCGTGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSTHQKR*TVRAPS
Trigger: GGATGGGGCACGGACTGTCCACCTTTTCTGATGTGT...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACGACATAAGGGAGCCCTaGGGAGCCTCTACCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNDIREP*GASTGP
Trigger: GGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTC...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACACTTCAGCTCTTTGAATaGGAGCCGGACCCGGGGCGT +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTLQLFE*EPDPGR
Trigger: ACGCCCCGGGTCCGGCTCTCATTCAAAGAGCTGAAG...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACATGGCCTTCAGCTCTTTaGATGAGAGCCGGACCCGGG +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTWPSAL*MRAGPG
Trigger: CCCGGGTCCGGCTCTCATTCAAAGAGCTGAAGGCCA...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACCGTGGTCCTCGTCCTTaGGCAAGATTCGGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHRGPRP*ARFGSR
Trigger: CCGACTACCGAATCTTGCTCAAGGACGAGGACCACG...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTTGGAGCTCATCAAAGTaGGTCTCAATGCCATCCTCG +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSWSSSK*VSMPSS
Trigger: CGAGGATGGCATTGAGACTCACTTTGATGAGCTCCA...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAGCAGGCTCAGGTGTGTaGCACCCACGGCTGACGCCA +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPAGSGV*HPRLTP
Trigger: TGGCGTCAGCCGTGGGTGTCACACACCTGAGCCTGC...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACGGCAGTACTGGTGGATaGGGCCCACTTCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNGSTGG*GPLLAG
Trigger: CCCAGCCAGAAGTGGGCCTCATCCACCAGTACTGCC...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGGAGGATGCTGCCACTaGGGCAGGCTATATTCAACC +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLGGCCH*GRLYST
Trigger: GGTTGAATATAGCCTGCCTCAGTGGCAGCATCCTCC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGGCACGCATTCCTCGATaGGCTGTGGGGAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMARIPR*AVGRLP
Trigger: GGGCAGCCTCCCCACAGCGCATCGAGGAATGCGTGC...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGTGCGCATGGCTGTCTaGTTTCCAAGTGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLVRMAV*FPSVRK
Trigger: CTTCCGCACACTTGGAAAGCAGACAGCCATGCGCAC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTAGTTGTACTGATCCGTaGGCATGGCTGTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSSCTDP*AWLSAF
Trigger: GAAAGCAGACAGCCATGCGCACGGATCAGTACAACT...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGATAGCGCCCGTCGGCTaGATCCACCTGGTCCACGGC +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMIAPVG*IHLVHG
Trigger: GCCGTGGACCAGGTGGATGCAGCCGACGGGCGCTAT...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCACTGTCCCGCGGTCTGTaGCCAGGAAAAGCACCTCAT +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPLSRGL*PGKAPH
Trigger: ATGAGGTGCTTTTCCTGGGCACAGACCGCGGGACAG...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCAGCACAATGACCTTCTaGACTGTCCCGCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLSTMTF*TVPRSV
Trigger: CACAGACCGCGGGACAGTGCAGAAGGTCATTGTGCT...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCACCACGATCGCTGAGCTaGAGTGCACGGAGCAACAAG +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPPRSLS*SARSNK
Trigger: CTTGTTGCTCCGTGCACTGCAGCTCAGCGATCGTGG...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGACTGGTCGTGGCTGAGTaGCCCCAACCCAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGLVVAE*PQPRQG
Trigger: CCCCTGCCTGGGTTGGGGGCACTCAGCCACGACCAG...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACCTGGCCCCTCTGCTATaGTCCCAGCCTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHLAPLL*SQPLSQ
Trigger: TTGACTCAGAGGCTGGGAGCATAGCAGAGGGGCCAG...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCAGGAAGTTGAAGAAGTaGGCGGTGCCTGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLRKLKK*AVPVAF
Trigger: GAAGGCCACAGGCACCGCCCACTTCTTCAACTTCCT...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCTCACATAGGTGCACATaGGGTTGTAGGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSSHRCT*GCRHLS
Trigger: GGACAGGTGCCTACAACCCCATGTGCACCTATGTGA...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGACTGAGTCTGGGTCCATaGTGTGGCCTGGGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGLSLGP*CGLGAA
Trigger: CGCCGCGCCCAGGCCACACCATGGACCCAGACTCAG...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAATGCTGTGTCCAGCTTaGGATCGTACGGACACTTGC +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRMLCPA*DRTDTC
Trigger: GCAAGTGTCCGTACGATCCCAAGCTGGACACAGCAT...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAGGAATGAGCTCAGCATaGATGAACGACGGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRGMSSA*MNDGSF
Trigger: GAACGACCCGTCGTTCATCCATGCTGAGCTCATTCC...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAGGGTTCCTCACGTCCTaGGTCTGCTGGACAAACACG +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPGFLTS*VCWTNT
Trigger: CGTGTTTGTCCAGCAGACCCAGGACGTGAGGAACCC...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGCATCCACTGGTAGTTaGGCCCCTCTTTGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLASTGS*APLCGQ
Trigger: TTGCCCACAAAGAGGGGCCCAACTACCAGTGGATGC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAGGTGGACTTCATAGATaGCGTGAAGGTTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRGGLHR*REGSTR
Trigger: CCTGGTGGAACCTTCACGCCATCTATGAAGTCCACC...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGAGGGTACACGGCCTaGTACATGAGTGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHRGYTA*YMSGWL
Trigger: CAGCCACCCACTCATGTACCAGGCCGTGTACCCTCT...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAGCAGCCCCATACGCCTaGCAGCGGTGCAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGAAPYA*QRCRLR
Trigger: CCTGAGCCTGCACCGCTGCCAGGCGTATGGGGCTGC...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTTCACCAGGATCTCGCTaGAACAGCCACTTAACAGTG +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSSPGSR*NSHLTV
Trigger: CACTGTTAAGTGGCTGTTCCAGCGAGATCCTGGTGA...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAGGGAAGAGGGCAGCATaGACGGCGTCCCGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGGKRAA*TASRPS
Trigger: ACTGGGCCGGGACGCCGTCCATGCTGCCCTCTTCCC...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAGGGACTGTGTGGTCCTaGCCTGGCCCCACCAACTGG +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPGTVWS*PGPTNW
Trigger: CCAGTTGGTGGGGCCAGGCCAGGACCACACAGTCCC...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCACCCGTCAGCTCTGCCTaGGCCTGGCCCCTCTGCTAT +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPPVSSA*AWPLCY
Trigger: ATAGCAGAGGGGCCAGGCCCAGGCAGAGCTGACGGG...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGCCCTCCCCTCAGAGCTaGGGCCTCCCGTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGPSPQS*GLPSAL
Trigger: CAGAGCTGACGGGAGGCCCCAGCTCTGAGGGGAGGG...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGCAGACAGCCCAAGATaGAAGAGAGGGAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLADSPR*KRGSTS
Trigger: ACTGGTGCTCCCTCTCTTCCATCTTGGGCTGTCTGC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS-3UTR TCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATTGACCAGGCAACAGTaGCCACCGTCATCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPLTRQQ*PPSSFR
Trigger: CCTGAACGATGACGGTGGTCACTGTTGCCTGGTCAA...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCATGTGCTCCACTTGTTaGCCAGGCAACAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLMCSTC*PGNSDH
Trigger: GTGGTCACTGTTGCCTGGTCAACAAGTGGAGCACAT...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACCCACCTCCTCCAGCATaGGCTCCTCCAACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNPPPPA*APPTPG
Trigger: ACCAGGAGTTGGAGGAGCTCATGCTGGAGGAGGTGG...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAGGGGCTGGCATCCTGTaGTGGCCCCTTCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPGAGIL*WPLLPF
Trigger: GAAGGGAAGAAGGGGCCATCACAGGATGCCAGCCCC...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAACAGCACGTAGTCCTTaGTGCCCACGTACATGCGGT +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPTARSP*CPRTCG
Trigger: ACCGCATGTACGTGGGCAGCAAGGACTACGTGCTGT...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACACAGCACGTAGTCCTTaGTGCCCACGTACATGCGGT +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHTARSP*CPRTCG
Trigger: ACCGCATGTACGTGGGCAGCAAGGACTACGTGCTGT...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACTCGCGGTTGATGTCGTaGAGGTCCAGGGACAGCACG +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNSRLMS*RSRDST
Trigger: CGTGCTGTCCCTGGACCTGCACGACATCAACCGCGA...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCACGCGGTTCACATAGGTaGACATGGGGTTGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPRGSHR*TWGCRH
Trigger: GTGCCTACAACCCCATGTGCACCTATGTGAACCGCG...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAGATCGTACGGACACTTaGCCTTCCCTGACTCGAGTC +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPDRTDT*PSLTRV
Trigger: GACTCGAGTCAGGGAAGGGCAAGTGTCCGTACGATC...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCATTGATGAGGGCCGATaGTGTGTCCAGCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLIDEGR*CVQLGI
Trigger: GATCCCAAGCTGGACACAGCATCGGCCCTCATCAAT...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCTCTGCTTTCCAAGTGTaGGGAAGATGGCTGCATCAG +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSSAFQV*GRWLHQ
Trigger: CTGATGCAGCCATCTTCCGCACACTTGGAAAGCAGA...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAAGTTGTACTGATCCGTaGGCATGGCTGTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRSCTDP*AWLSAF
Trigger: GAAAGCAGACAGCCATGCGCACGGATCAGTACAACT...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAAAAGCTTATCATCATTaGGCTCCGCACTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: EVVDIREPWGASTGPRPLKAYHH*APHCQE
Trigger: TTCCTGACAGTGCGGAGCGCAATGATGATAAGCTTT...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCACAAAGTGAGTCTCAATaGCATCCTCGCCCGGGACAG +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPQSESQ*HPRPGQ
Trigger: CTGTCCCGGGCGAGGATGGCATTGAGACTCACTTTG...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGATAGCGCCCGTCGGCTaGATCCACCTGGTCCACGGC +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGIAPVG*IHLVHG
Trigger: GCCGTGGACCAGGTGGATGCAGCCGACGGGCGCTAT...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCATGGTCTTGACGGGTaGTGGATCCTTGAAGACCTC +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLHGLDG*WILEDL
Trigger: GAGGTCTTCAAGGATCCAGCACCCGTCAAGACCATG...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACCCGGCCACGCCATACTaGACAGACTCCACGGCATTC +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNPATPY*TDSTAF
Trigger: GAATGCCGTGGAGTCTGTGCAGTATGGCGTGGCCGG...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACTCCCGGCCCAGTACATaGAGCTGCACTCGTGTGACG +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNSRPST*SCTRVT
Trigger: CGTCACACGAGTGCAGCTGCATGTACTGGGCCGGGA...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGACGGCGACAAGCATTGTaGGAGGGGCCTAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGRRQAL*EGPRAQ
Trigger: CTGGGCCCTAGGCCCCTCCCACAATGCTTGTCGCCG...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000002829.8
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGCGGCGACAAGCATTGTaGGAGGGGCCTAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGRRQAL*EGPRAQ
Trigger: CTGGGCCCTAGGCCCCTCCCACAATGCTTGTCGCCG...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000002829.8
ENST00000434342.5
CDS-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACACGTACATGCGGTCGTaGTCCTCGTCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHTYMRS*SSSLSK
Trigger: CTTGCTCAAGGACGAGGACCACGACCGCATGTACGT...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACGTTCGGTTCCAGGGCTaGATGAGCCTGACGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHVRFQG*MSLTKF
Trigger: GAACTTCGTCAGGCTCATCCAGCCCTGGAACCGAAC...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCACTGATCCGTGCGCATaGCTGTCTGCTTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLTDPCA*LSAFQV
Trigger: CACTTGGAAAGCAGACAGCCATGCGCACGGATCAGT...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACGTCCTGGGTCTGCTaGACAAACACGTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTTSWVC*TNTSWS
Trigger: GCTCCAGGACGTGTTTGTCCAGCAGACCCAGGACGT...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAGCATCCACTGGTAGTTaGGCCCCTCTTTGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPASTGS*APLCGQ
Trigger: TTGCCCACAAAGAGGGGCCCAACTACCAGTGGATGC...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGGTGGACTTCATAGATaGCGTGAAGGTTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLGGLHR*REGSTR
Trigger: CCTGGTGGAACCTTCACGCCATCTATGAAGTCCACC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCTGGTACATGAGTGGGTaGCTGCGCATGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSWYMSG*LRMKLI
Trigger: GATCAACTTCATGCGCAGCCACCCACTCATGTACCA...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACTCGGCTGCATCCACCTaGTCCACGGCAATAGTGGTA +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHSAAST*STAIVV
Trigger: TACCACTATTGCCGTGGACCAGGTGGATGCAGCCGA...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATCGGCTGCATCCACCTaGTCCACGGCAATAGTGGTA +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPSAAST*STAIVV
Trigger: TACCACTATTGCCGTGGACCAGGTGGATGCAGCCGA...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCACTTAACAGTGGCTTaGGGCGAGCGGGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMHLTVA*GERGWH
Trigger: GTGCCAGCCCCGCTCGCCCCAAGCCACTGTTAAGTG...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGCAGGCACAGGCAGCTaGCCTCATGTGTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKAGTGS*PHVSGG
Trigger: CCCTCCGGACACATGAGGCCAGCTGCCTGTGCCTGC...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGACAAGGGCTAGGCTaGCCCATGGCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKGQGLG*PMAGTG
Trigger: GCCTGTGCCTGCCATGGGCCAGCCTAGCCCTTGTCC...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAGCCCCACCAACTGGCTaGGCCTGGTTAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGAPPTG*AWLGRL
Trigger: GAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGC...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAATGTGTGGTCCTGGCCTaGCCCCACCAACTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKCVVLA*PHQLAG
Trigger: CCCAGCCAGTTGGTGGGGCCAGGCCAGGACCACACA...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGTGTGTGGTCCTGGCCTaGCCCCACCAACTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGCVVLA*PHQLAG
Trigger: CCCAGCCAGTTGGTGGGGCCAGGCCAGGACCACACA...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAAGTCTGGGGACTGTGTaGTCCTGGCCTGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKSLGTV*SWPGPT
Trigger: GGTGGGGCCAGGCCAGGACCACACAGTCCCCAGACT...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAAACCCAGGCAGGGGCTaGCATCCTGTGATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPNPGRG*HPVMAP
Trigger: AGGGGCCATCACAGGATGCCAGCCCCTGCCTGGGTT...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGTACCCAGGAAGGGGCTaGTCGTGGCTGAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGYPGRG*SWLSAP
Trigger: GGGGGCACTCAGCCACGACCAGCCCCTTCCTGGGTA...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAATACCCAGGAAGGGGCTaGTCGTGGCTGAGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKYPGRG*SWLSAP
Trigger: GGGGGCACTCAGCCACGACCAGCCCCTTCCTGGGTA...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGACATAAGGGAGCCCTaGGGAGCCTCTACCGGCCCC +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKDIREP*GASTGP
Trigger: GGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTC...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTTCTCCCCTGCATCTGTaGCCAATAAAGTGGGTTACT +
Preference number: 4 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSSPLHL*PIKWVT
Trigger: AGTAACCCACTTTATTGGCCACAGATGCAGGGGAGA...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS-3UTR TCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCACCGGGAGTTGTACTaGTCCGTGCGCATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMHRELY*SVRMAV
Trigger: GACAGCCATGCGCACGGATCAGTACAACTCCCGGTG...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGGGGGCTGGCATCCTGTaGTGGCCCCTTCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGGAGIL*WPLLPF
Trigger: GAAGGGAAGAAGGGGCCATCACAGGATGCCAGCCCC...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGTGCTGCCCACGTACATaGGGTCGTGGTCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMCCPRT*GRGPRP
Trigger: AGGACGAGGACCACGACCGCATGTACGTGGGCAGCA...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAGATCGTACGGACACTTaGCCTTCCCTGACTCGAGTC +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTDRTDT*PSLTRV
Trigger: GACTCGAGTCAGGGAAGGGCAAGTGTCCGTACGATC...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAGTGCGCATGGCTGTCTaGTTTCCAAGTGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTVRMAV*FPSVRK
Trigger: CTTCCGCACACTTGGAAAGCAGACAGCCATGCGCAC...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACCTCACGTCCTGGGTCTaGTGGACAAACACGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNLTSWV*WTNTSW
Trigger: CCAGGACGTGTTTGTCCAGCAGACCCAGGACGTGAG...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCATACGCCTGGCAGCGGTaGAGGCTCAGGTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPYAWQR*RLRCVT
Trigger: TGTCACACACCTGAGCCTGCACCGCTGCCAGGCGTA...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCACCGGCCACGCCATACTaGACAGACTCCACGGCATTC +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPPATPY*TDSTAF
Trigger: GAATGCCGTGGAGTCTGTGCAGTATGGCGTGGCCGG...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGCAAGGAAGGCTGCGCTaGCGGCCACGCCATACTGCA +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGQGRLR*RPRHTA
Trigger: TGCAGTATGGCGTGGCCGGCAGCGCAGCCTTCCTTG...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGACGGAGCAACAAGCCCTaGTCTGTGCGCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGRSNKP*SVRRKR
Trigger: CCGCTTCCTGCGCACAGAGCAGGGCTTGTTGCTCCG...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCATCCCGGCCCAGTACATaGAGCTGCACTCGTGTGACG +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPSRPST*SCTRVT
Trigger: CGTCACACGAGTGCAGCTGCATGTACTGGGCCGGGA...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACCCCACCCAGGCAGGATaGCTCTTCTCCTATCCCCAA +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNPTQAG*LFSYPQ
Trigger: TTGGGGATAGGAGAAGAGGCATCCTGCCTGGGTGGG...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACCTGGCCCCTCTGCTATaGTCCCAGCCTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNLAPLL*SQPLSQ
Trigger: TTGACTCAGAGGCTGGGAGCATAGCAGAGGGGCCAG...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAGTTCGGTTCCAGGGCTaGATGAGCCTGACGAAGTTC +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTVRFQG*MSLTKF
Trigger: GAACTTCGTCAGGCTCATCCAGCCCTGGAACCGAAC...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAACTGATCCGTGCGCATaGCTGTCTGCTTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPTDPCA*LSAFQV
Trigger: CACTTGGAAAGCAGACAGCCATGCGCACGGATCAGT...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAGGAATGAGCTCAGCATaGATGAACGACGGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPGMSSA*MNDGSF
Trigger: GAACGACCCGTCGTTCATCCATGCTGAGCTCATTCC...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAACACTTAACAGTGGCTTaGGGCGAGCGGGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKHLTVA*GERGWH
Trigger: GTGCCAGCCCCGCTCGCCCCAAGCCACTGTTAAGTG...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCACCCTGGCAGTACTGGTaGATGAGGCCCACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPPWQYW*MRPTSG
Trigger: GCCAGAAGTGGGCCTCATCCACCAGTACTGCCAGGG...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACATTGTCCTGTAGATCTTaGCGGAGGCTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTLSCRS*RRLSSR
Trigger: CCTGCTGGACAGCCTCCGCCAAGATCTACAGGACAA...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCACCCCAGTCTCCAAAGTaGTCCTCGCATCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPPQSPK*SSHPCL
Trigger: TAGACATGGATGCGAGGACCACTTTGGAGACTGGGG...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACCCCCAGTCTCCAAAGTaGTCCTCGCATCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHPQSPK*SSHPCL
Trigger: TAGACATGGATGCGAGGACCACTTTGGAGACTGGGG...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCATCCCACACTCGCCGTTaGCATCCTTGCCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPSHTRR*HPCLRA
Trigger: TGCTCTCAGGCAAGGATGTCAACGGCGAGTGTGGGA...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAACACCGGGAGTTGTACTaGTCCGTGCGCATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKHRELY*SVRMAV
Trigger: GACAGCCATGCGCACGGATCAGTACAACTCCCGGTG...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAATGTGCTCCACTTGTTaGCCAGGCAACAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTMCSTC*PGNSDH
Trigger: GTGGTCACTGTTGCCTGGTCAACAAGTGGAGCACAT...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACTGGAGCTCATCAAAGTaGGTCTCAATGCCATCCTCG +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHWSSSK*VSMPSS
Trigger: CGAGGATGGCATTGAGACTCACTTTGATGAGCTCCA...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAACGGGTGCTGGATCCTTaGAGACCTCCACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKRVLDP*RPPPPP
Trigger: TGGAGGAGGTGGAGGTCTTCAAGGATCCAGCACCCG...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGGAGAGAGTGGGGGAATaGGACACATGCAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMERVGE*DTCRQP
Trigger: GGGCTGTCTGCATGTGTCTCATTCCCCCACTCTCTC...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS-3UTR GCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGGCACGTAGTCCTTGCTaGCCACGTACATGCGGTCGT +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMARSPC*PRTCGR
Trigger: ACGACCGCATGTACGTGGGCAGCAAGGACTACGTGC...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGATCGCGGTTGATGTCGTaGAGGTCCAGGGACAGCACG +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGSRLMS*RSRDST
Trigger: CGTGCTGTCCCTGGACCTGCACGACATCAACCGCGA...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAATCGCGGTTGATGTCGTaGAGGTCCAGGGACAGCACG +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKSRLMS*RSRDST
Trigger: CGTGCTGTCCCTGGACCTGCACGACATCAACCGCGA...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAAGTTGTACTGATCCGTaGGCATGGCTGTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPSCTDP*AWLSAF
Trigger: GAAAGCAGACAGCCATGCGCACGGATCAGTACAACT...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCATCGTTCAGGCAAATaGGCCCGATGCGGGCGTACA +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMHRSGK*ARCGRT
Trigger: TGTACGCCCGCATCGGGCGCATTTGCCTGAACGATG...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCACTGTCCCGCGGTCTGTaGCCAGGAAAAGCACCTCAT +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPLSRGL*PGKAPH
Trigger: ATGAGGTGCTTTTCCTGGGCACAGACCGCGGGACAG...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAACCGCCTCTTGGAGGATaGTGTATAGCGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKPPLGG*CIAGAG
Trigger: GCCTGCTCCCGCTATACAGCATCCTCCAAGAGGCGG...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGTTGAACCCACGGCACTaGCTGATGGGGTTTCCGTGC +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMLNPRH*LMGFPC
Trigger: GCACGGAAACCCCATCAGGCAGTGCCGTGGGTTCAA...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGACAAGCCCTGCTCTGTaGGCAGGAAGCGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGTSPAL*AGSGPL
Trigger: CAGAGGACCGCTTCCTGCGCACAGAGCAGGGCTTGT...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCCACGATCGCTGAGCTaGAGTGCACGGAGCAACAAG +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMPRSLS*SARSNK
Trigger: CTTGTTGCTCCGTGCACTGCAGCTCAGCGATCGTGG...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAACTCGTGTGACGACGTaGTTAAAGTTGTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRTRVTT*LKLFSV
Trigger: CACTGAGAACAACTTTAAGCACGTCGTCACACGAGT...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGATCCCGGCCCAGTACATaGAGCTGCACTCGTGTGACG +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGSRPST*SCTRVT
Trigger: CGTCACACGAGTGCAGCTGCATGTACTGGGCCGGGA...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCCCACCCAGGCAGGATaGCTCTTCTCCTATCCCCAA +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMPTQAG*LFSYPQ
Trigger: TTGGGGATAGGAGAAGAGGCATCCTGCCTGGGTGGG...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCACCCACCCAGGCAGGATaGCTCTTCTCCTATCCCCAA +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPPTQAG*LFSYPQ
Trigger: TTGGGGATAGGAGAAGAGGCATCCTGCCTGGGTGGG...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCACTGGCCCCTCTGCTATaGTCCCAGCCTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPLAPLL*SQPLSQ
Trigger: TTGACTCAGAGGCTGGGAGCATAGCAGAGGGGCCAG...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAACCCATCTACCCAACTaGCCCCCAGAGCTAATTACA +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPTHLPN*PPELIT
Trigger: TGTAATTAGCTCTGGGGGGCAGTTGGGTAGATGGGT...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCATTCCTCGATGCGCTGTaGGGAGGCTGCCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPFLDAL*GGCPVY
Trigger: ATACACTGGGCAGCCTCCCCACAGCGCATCGAGGAA...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAGGGTTCCTCACGTCCTaGGTCTGCTGGACAAACACG +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPGFLTS*VCWTNT
Trigger: CGTGTTTGTCCAGCAGACCCAGGACGTGAGGAACCC...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGCGAATATCAGCCATaGAGTAGACACACACGGCAG +
Preference number: 4 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPCEYQP*SRHTRQ
Trigger: CTGCCGTGTGTGTCTACTCCATGGCTGATATTCGCA...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACTCACCAGGATCTCGCTaGAACAGCCACTTAACAGTG +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHSPGSR*NSHLTV
Trigger: CACTGTTAAGTGGCTGTTCCAGCGAGATCCTGGTGA...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGGGCGCTCATGGACAGTaGTGGGAAGAGGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGGAHGQ*WEEGSM
Trigger: CATGCTGCCCTCTTCCCACCACTGTCCATGAGCGCC...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGACCCTGGCAGTACTGGTaGATGAGGCCCACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGPWQYW*MRPTSG
Trigger: GCCAGAAGTGGGCCTCATCCACCAGTACTGCCAGGG...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGCTTTTTCTGGTCCTaGGGCTCAGGAGACCGGGGT +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKGFFWS*GSGDRG
Trigger: ACCCCGGTCTCCTGAGCCCCAGGACCAGAAAAAGCC...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGGGCTTTTTCTGGTCCTaGGGCTCAGGAGACCGGGGT +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGGFFWS*GSGDRG
Trigger: ACCCCGGTCTCCTGAGCCCCAGGACCAGAAAAAGCC...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGATGTTTATTAGCAAGATaGAACCCAAAGGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRCLLAR*NPKAAV
Trigger: CACAGCCGCCTTTGGGTTCCATCTTGCTAATAAACA...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACGTTGACATCCTTGCCTaGGAGCACGCATTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNVDILA*EHAFLD
Trigger: ATCGAGGAATGCGTGCTCTCAGGCAAGGATGTCAAC...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGATCCCACACTCGCCGTTaGCATCCTTGCCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGSHTRR*HPCLRA
Trigger: TGCTCTCAGGCAAGGATGTCAACGGCGAGTGTGGGA...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGTTGACCAGGCAACAGTaGCCACCGTCATCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMLTRQQ*PPSSFR
Trigger: CCTGAACGATGACGGTGGTCACTGTTGCCTGGTCAA...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACATGTGCTCCACTTGTTaGCCAGGCAACAGTGACCAC +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNMCSTC*PGNSDH
Trigger: GTGGTCACTGTTGCCTGGTCAACAAGTGGAGCACAT...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAGGGCAAAGGGCCCGTTaGAGACCATGCGAATATCAG +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPGQRAR*RPCEYQ
Trigger: CTGATATTCGCATGGTCTTCAACGGGCCCTTTGCCC...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAGGAGGATGCTGCCACTaGGGCAGGCTATATTCAACC +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPGGCCH*GRLYST
Trigger: GGTTGAATATAGCCTGCCTCAGTGGCAGCATCCTCC...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCATCCACACCCATCCCCTaGAGTGGTGGACATAAGGGA +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPSTPIP*SGGHKG
Trigger: TCCCTTATGTCCACCACTTCAGGGGATGGGTGTGGA...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAGCACGTAGTCCTTGCTaGCCACGTACATGCGGTCGT +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGARSPC*PRTCGR
Trigger: ACGACCGCATGTACGTGGGCAGCAAGGACTACGTGC...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACATTGATGAGGGCCGATaGTGTGTCCAGCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNIDEGR*CVQLGI
Trigger: GATCCCAAGCTGGACACAGCATCGGCCCTCATCAAT...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACTGTGCGGAAGATGGCTaGATCAGTGCCCATAAAATC +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHCAEDG*ISAHKI
Trigger: GATTTTATGGGCACTGATGCAGCCATCTTCCGCACA...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGACTGTCCCGCGGTCTGTaGCCAGGAAAAGCACCTCAT +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGLSRGL*PGKAPH
Trigger: ATGAGGTGCTTTTCCTGGGCACAGACCGCGGGACAG...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGAGCACAATGACCTTCTaGACTGTCCCGCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMSTMTF*TVPRSV
Trigger: CACAGACCGCGGGACAGTGCAGAAGGTCATTGTGCT...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGTTGAACCCACGGCACTaGCTGATGGGGTTTCCGTGC +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGLNPRH*LMGFPC
Trigger: GCACGGAAACCCCATCAGGCAGTGCCGTGGGTTCAA...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCACATCCGAGTAGGGCTTaGTCCCTCCCTTTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPHPSRA*SLPLSC
Trigger: ACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATG...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGAAGGTGGACAGTCCGTaGCCCATCCGAGTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGKVDSP*PIRVGL
Trigger: AAGCCCTACTCGGATGGGGCACGGACTGTCCACCTT...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGACGTCCTGGGTCTGCTaGACAAACACGTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGTSWVC*TNTSWS
Trigger: GCTCCAGGACGTGTTTGTCCAGCAGACCCAGGACGT...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAACGTCCTGGGTCTGCTaGACAAACACGTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGTSWVC*TNTSWS
Trigger: GCTCCAGGACGTGTTTGTCCAGCAGACCCAGGACGT...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACATGGTACATGAGTGGGTaGCTGCGCATGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTWYMSG*LRMKLI
Trigger: GATCAACTTCATGCGCAGCCACCCACTCATGTACCA...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGGGCCTGGTACATGAGTaGGTGGCTGCGCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMGLVHE*VAAHEV
Trigger: AACTTCATGCGCAGCCACCCACTCATGTACCAGGCC...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGAGAGGGTACACGGCCTaGTACATGAGTGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGRGYTA*YMSGWL
Trigger: CAGCCACCCACTCATGTACCAGGCCGTGTACCCTCT...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAGGTCTTGACGGGTGCTaGATCCTTGAAGACCTCCAC +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPGLDGC*ILEDLH
Trigger: GTGGAGGTCTTCAAGGATCCAGCACCCGTCAAGACC...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACACATGGGTCTAAGTTTTaGAGGATGCTGCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTHGSKF*RMLPLR
Trigger: CCTCAGTGGCAGCATCCTCCAAAACTTAGACCCATG...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCCAACTGGCTGGGCCTaGTTAGGCAGGCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMPTGWA*LGRLCF
Trigger: AAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCATTGTCCTGTAGATCTTaGCGGAGGCTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPLSCRS*RRLSSR
Trigger: CCTGCTGGACAGCCTCCGCCAAGATCTACAGGACAA...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAGGGCAAAGGGCCCGTTaGAGACCATGCGAATATCAG +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGGQRAR*RPCEYQ
Trigger: CTGATATTCGCATGGTCTTCAACGGGCCCTTTGCCC...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAACAGCACGTAGTCCTTaGTGCCCACGTACATGCGGT +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGTARSP*CPRTCG
Trigger: ACCGCATGTACGTGGGCAGCAAGGACTACGTGCTGT...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGGTGCGCATGGCTGTCTaGTTTCCAAGTGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGVRMAV*FPSVRK
Trigger: CTTCCGCACACTTGGAAAGCAGACAGCCATGCGCAC...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAAAGCTTATCATCATTaGGCTCCGCACTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHKAYHH*APHCQE
Trigger: TTCCTGACAGTGCGGAGCGCAATGATGATAAGCTTT...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAAGCACAATGACCTTCTaGACTGTCCCGCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGSTMTF*TVPRSV
Trigger: CACAGACCGCGGGACAGTGCAGAAGGTCATTGTGCT...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCATGTTCTCAGTGGCTGTaGAGGAGTAGAGGCCACGAT +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPCSQWL*RSRGHD
Trigger: ATCGTGGCCTCTACTCCTGCACAGCCACTGAGAACA...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGAGGAAGTTGAAGAAGTaGGCGGTGCCTGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGRKLKK*AVPVAF
Trigger: GAAGGCCACAGGCACCGCCCACTTCTTCAACTTCCT...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAAGGAAGTTGAAGAAGTaGGCGGTGCCTGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGRKLKK*AVPVAF
Trigger: GAAGGCCACAGGCACCGCCCACTTCTTCAACTTCCT...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGACGTACATGCGGTCGTaGTCCTCGTCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGTYMRS*SSSLSK
Trigger: CTTGCTCAAGGACGAGGACCACGACCGCATGTACGT...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGTCACATAGGTGCACATaGGGTTGTAGGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMSHRCT*GCRHLS
Trigger: GGACAGGTGCCTACAACCCCATGTGCACCTATGTGA...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGGGTGGACTTCATAGATaGCGTGAAGGTTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMGGLHR*REGSTR
Trigger: CCTGGTGGAACCTTCACGCCATCTATGAAGTCCACC...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAATCGGCTGCATCCACCTaGTCCACGGCAATAGTGGTA +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKSAAST*STAIVV
Trigger: TACCACTATTGCCGTGGACCAGGTGGATGCAGCCGA...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGAGCTCCTCCAACTCCTaGTCATCCTTGGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGSSSNS*SSLGST
Trigger: TGTGCTGCCCAAGGATGACCAGGAGTTGGAGGAGCT...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTCTTGACGGGTGCTaGATCCTTGAAGACCTCCAC +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKGLDGC*ILEDLH
Trigger: GTGGAGGTCTTCAAGGATCCAGCACCCGTCAAGACC...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACTCACCAGGATCTCGCTaGAACAGCCACTTAACAGTG +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNSPGSR*NSHLTV
Trigger: CACTGTTAAGTGGCTGTTCCAGCGAGATCCTGGTGA...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAACCAACTGGCTGGGCCTaGTTAGGCAGGCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKPTGWA*LGRLCF
Trigger: AAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAACACATCAGAAAAGGTaGACAGTCCGTGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPTHQKR*TVRAPS
Trigger: GGATGGGGCACGGACTGTCCACCTTTTCTGATGTGT...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGAGGCACAGGAGAGAGTaGGGGAATGAGACACATGCA +
Preference number: 4 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMRHRRE*GNETHA
Trigger: TGCATGTGTCTCATTCCCCCACTCTCTCCTGTGCCT...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS-3UTR TCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGGTTGACATCCTTGCCTaGGAGCACGCATTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGVDILA*EHAFLD
Trigger: ATCGAGGAATGCGTGCTCTCAGGCAAGGATGTCAAC...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAATTGATGAGGGCCGATaGTGTGTCCAGCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGIDEGR*CVQLGI
Trigger: GATCCCAAGCTGGACACAGCATCGGCCCTCATCAAT...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCATCTGCTTTCCAAGTGTaGGGAAGATGGCTGCATCAG +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPSAFQV*GRWLHQ
Trigger: CTGATGCAGCCATCTTCCGCACACTTGGAAAGCAGA...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAACATGGTCTTGACGGGTaGTGGATCCTTGAAGACCTC +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKHGLDG*WILEDL
Trigger: GAGGTCTTCAAGGATCCAGCACCCGTCAAGACCATG...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAATGTTCTCAGTGGCTGTaGAGGAGTAGAGGCCACGAT +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKCSQWL*RSRGHD
Trigger: ATCGTGGCCTCTACTCCTGCACAGCCACTGAGAACA...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACTCGTGTGACGACGTaGTTAAAGTTGTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTTRVTT*LKLFSV
Trigger: CACTGAGAACAACTTTAAGCACGTCGTCACACGAGT...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAACCCATCTACCCAACTaGCCCCCAGAGCTAATTACA +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPTHLPN*PPELIT
Trigger: TGTAATTAGCTCTGGGGGGCAGTTGGGTAGATGGGT...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAATGCTGTGTCCAGCTTaGGATCGTACGGACACTTGC +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKMLCPA*DRTDTC
Trigger: GCAAGTGTCCGTACGATCCCAAGCTGGACACAGCAT...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAACACATCAGAAAAGGTaGACAGTCCGTGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGTHQKR*TVRAPS
Trigger: GGATGGGGCACGGACTGTCCACCTTTTCTGATGTGT...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGACCCCAGTCTCCAAAGTaGTCCTCGCATCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGPQSPK*SSHPCL
Trigger: TAGACATGGATGCGAGGACCACTTTGGAGACTGGGG...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR TCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGTGGAGCTCATCAAAGTaGGTCTCAATGCCATCCTCG +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGWSSSK*VSMPSS
Trigger: CGAGGATGGCATTGAGACTCACTTTGATGAGCTCCA...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCATGTGCGGAAGATGGCTaGATCAGTGCCCATAAAATC +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPCAEDG*ISAHKI
Trigger: GATTTTATGGGCACTGATGCAGCCATCTTCCGCACA...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGACCCATCTACCCAACTaGCCCCCAGAGCTAATTACA +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGTHLPN*PPELIT
Trigger: TGTAATTAGCTCTGGGGGGCAGTTGGGTAGATGGGT...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGTGCGAATATCAGCCATaGAGTAGACACACACGGCAG +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGCEYQP*SRHTRQ
Trigger: CTGCCGTGTGTGTCTACTCCATGGCTGATATTCGCA...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAATGCGAATATCAGCCATaGAGTAGACACACACGGCAG +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKCEYQP*SRHTRQ
Trigger: CTGCCGTGTGTGTCTACTCCATGGCTGATATTCGCA...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGTGGTACATGAGTGGGTaGCTGCGCATGAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGWYMSG*LRMKLI
Trigger: GATCAACTTCATGCGCAGCCACCCACTCATGTACCA...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACTGTTTATTAGCAAGATaGAACCCAAAGGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SLQSGPRIHVYATAQADNCLLAR*NPKAAV
Trigger: CACAGCCGCCTTTGGGTTCCATCTTGCTAATAAACA...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAAAAGCTTATCATCATTaGGCTCCGCACTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPKAYHH*APHCQE
Trigger: TTCCTGACAGTGCGGAGCGCAATGATGATAAGCTTT...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAACTCGTGTGACGACGTaGTTAAAGTTGTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGTRVTT*LKLFSV
Trigger: CACTGAGAACAACTTTAAGCACGTCGTCACACGAGT...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CCA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAATGTTTATTAGCAAGATaGAACCCAAAGGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKCLLAR*NPKAAV
Trigger: CACAGCCGCCTTTGGGTTCCATCTTGCTAATAAACA...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR GCA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGAATAAATACTGTCTTTaGAGGGGCAGGGTGTGTATA +
Preference number: 4 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGNKYCL*RGRVCI
Trigger: TATACACACCCTGCCCCTGCAAAGACAGTATTTATT...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS CCA 90 bp CTGCGCTCGGGGCTCTCCGGACCGCCGCGGTTCGTTCGCTCGCTCTaGTCTCGCGGCCGCCGGCGGGACGGGGCGCTCAGAGCCGCGCGG +
Preference number: 5 (lower is better)
Translates to: LRSGLSGPPRFVRSL*SRGRRRDGALRAAR
Trigger: CCGCGCGGCTCTGAGCGCCCCGTCCCGCCGGCGGCCGCGAGACCAGAGCGAGCGAACGAACCGCGGCGGTCCGGAGAGCCCCGAGCGCAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414301.5
CDS GCA 90 bp GCAGTGCCGCGGGTCCCAGAGGGGTCGCGGGGTGGCCCGGCCGCCTaGCCGCTCCCTCCCGGTTCCCGCTGCACTCACCTCTTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: AVPRVPEGSRGGPAA*PLPPGSRCTHLFRS
Trigger: GCTGCGGAAGAGGTGAGTGCAGCGGGAACCGGGAGGGAGCGGGCAGGCGGCCGGGCCACCCCGCGACCCCTCTGGGACCCGCGGCACTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426511.5
CDS CCA 90 bp CGGTGGCGCGCACTCGGCTTCGAAGCGCTGCGCTCTCCTGGCTGCTaGACCCGGGCCGGGCGGCCGCGCTGGGCTGCACGGTTCCTCGCG +
Preference number: 5 (lower is better)
Translates to: RWRALGFEALRSPGC*TRAGRPRWAARFLA
Trigger: CGCGAGGAACCGTGCAGCCCAGCGCGGCCGCCCGGCCCGGGTCCAGCAGCCAGGAGAGCGCAGCGCTTCGAAGCCGAGTGCGCGCCACCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450338.5
CDS GCA 90 bp GCGGCCGCGCTGGGCTGCACGGTTCCTCGCGGCGTACCCAGGTCCTaGGCTGCGCTCGGGGCTCTCCGGACCGCCGCGGTTCGTTCGCTC +
Preference number: 5 (lower is better)
Translates to: AAALGCTVPRGVPRS*AALGALRTAAVRSL
Trigger: GAGCGAACGAACCGCGGCGGTCCGGAGAGCCCCGAGCGCAGCGCAGGACCTGGGTACGCCGCGAGGAACCGTGCAGCCCAGCGCGGCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450338.5
CDS CCA 90 bp AAGCAGGCTCCACTCTCTAGAAACCTCTTCCGCAGCGGCGGGGCCTaGGCGCCCGGGCGGCGGCGGCGGCACGGAGCGGCTCCCGTTGGG +
Preference number: 5 (lower is better)
Translates to: KQAPLSRNLFRSGGA*APGRRRRHGAAPVG
Trigger: CCCAACGGGAGCCGCTCCGTGCCGCCGCCGCCGCCCGGGCGCCCAGGCCCCGCCGCTGCGGAAGAGGTTTCTAGAGAGTGGAGCCTGCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000002829.8
ENST00000450338.5
CDS GCA 90 bp CGCGCTGGGCTGCACGGTTCCTCGCGGCGTACCCAGGTCCTGCGCTaGGCTCGGGGCTCTCCGGACCGCCGCGGTTCGTTCGCTCGCTCT +
Preference number: 5 (lower is better)
Translates to: RAGLHGSSRRTQVLR*ARGSPDRRGSFARS
Trigger: AGAGCGAGCGAACGAACCGCGGCGGTCCGGAGAGCCCCGAGCGCAGCGCAGGACCTGGGTACGCCGCGAGGAACCGTGCAGCCCAGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450338.5
CDS TCA 90 bp CGGAGGGCACCATCCGTGGCTCTGCTGCCGCGGCCTCTGACCGCCTaGGTCTGGGTCCATGGTGTGGCCTGGGCGCGGCGTCCGCGGTTC +
Preference number: 5 (lower is better)
Translates to: RRAPSVALLPRPLTA*VWVHGVAWARRPRF
Trigger: GAACCGCGGACGCCGCGCCCAGGCCACACCATGGACCCAGACTCAGGCGGTCAGAGGCCGCGGCAGCAGAGCCACGGATGGTGCCCTCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS TCA 90 bp GCATCGGGCGGAGGGCACCATCCGTGGCTCTGCTGCCGCGGCCTCTaGCCGCCTGAGTCTGGGTCCATGGTGTGGCCTGGGCGCGGCGTC +
Preference number: 5 (lower is better)
Translates to: ASGGGHHPWLCCRGL*PPESGSMVWPGRGV
Trigger: GACGCCGCGCCCAGGCCACACCATGGACCCAGACTCAGGCGGTCAGAGGCCGCGGCAGCAGAGCCACGGATGGTGCCCTCCGCCCGATGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS CCA 90 bp GGGGGTGGCGGGGCGCTCATGGACAGTGGTGGGAAGAGGGCAGCATaGACGGCGTCCCGGCCCAGTACATGCAGCTGCACTCGTGTGACG +
Preference number: 5 (lower is better)
Translates to: GGGGALMDSGGKRAA*TASRPSTCSCTRVT
Trigger: CGTCACACGAGTGCAGCTGCATGTACTGGGCCGGGACGCCGTCCATGCTGCCCTCTTCCCACCACTGTCCATGAGCGCCCCGCCACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS CCA 90 bp CGCCGGTCACCAGGATCTCGCTGGAACAGCCACTTAACAGTGGCTTaGGGCGAGCGGGGCTGGCACTCAAGGAAGGCTGCGCTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: RRSPGSRWNSHLTVA*GERGWHSRKAALPA
Trigger: GGCCGGCAGCGCAGCCTTCCTTGAGTGCCAGCCCCGCTCGCCCCAAGCCACTGTTAAGTGGCTGTTCCAGCGAGATCCTGGTGACCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS GCA 90 bp CAGTGGCTTGGGGCGAGCGGGGCTGGCACTCAAGGAAGGCTGCGCTaGCGGCCACGCCATACTGCACAGACTCCACGGCATTCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: QWLGASGAGTQGRLR*RPRHTAQTPRHSCW
Trigger: CCAACAAGAATGCCGTGGAGTCTGTGCAGTATGGCGTGGCCGGCAGCGCAGCCTTCCTTGAGTGCCAGCCCCGCTCGCCCCAAGCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS CCA 90 bp CGGTCCTCTGCACGAATCTCTCGGCGCCGGTCACCAGGATCTCGCTaGAACAGCCACTTAACAGTGGCTTGGGGCGAGCGGGGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: RSSARISRRRSPGSR*NSHLTVAWGERGWH
Trigger: GTGCCAGCCCCGCTCGCCCCAAGCCACTGTTAAGTGGCTGTTCCAGCGAGATCCTGGTGACCGGCGCCGAGAGATTCGTGCAGAGGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS GCA 90 bp GGGTCCATGGTGTGGCCTGGGCGCGGCGTCCGCGGTTCACATAGGTaGACATGGGGTTGTAGGCACCTGTCCCGCACACATACAGGTGTG +
Preference number: 5 (lower is better)
Translates to: GSMVWPGRGVRGSHR*TWGCRHLSRTHTGV
Trigger: CACACCTGTATGTGTGCGGGACAGGTGCCTACAACCCCATGTGCACCTATGTGAACCGCGGACGCCGCGCCCAGGCCACACCATGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS GCA 90 bp CCCGCGGTCTGTGCCCAGGAAAAGCACCTCATAGCGCCCGTCGGCTaGATCCACCTGGTCCACGGCAATAGTGGTAAGGCGGTAGGGAGC +
Preference number: 5 (lower is better)
Translates to: PAVCAQEKHLIAPVG*IHLVHGNSGKAVGS
Trigger: GCTCCCTACCGCCTTACCACTATTGCCGTGGACCAGGTGGATGCAGCCGACGGGCGCTATGAGGTGCTTTTCCTGGGCACAGACCGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
ENST00000470737.1
CDS-3UTR CAA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCGACCGGCGACAAGCATaGTGGGAGGGGCCTAGGGCC +
Preference number: 5 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSDRRQA*WEGPRA
Trigger: GGCCCTAGGCCCCTCCCACAATGCTTGTCGCCGGTC...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000002829.8
ENST00000434342.5
CDS-3UTR CAA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAATGAGGGGCTCGCGGTaGATGTCGTGCAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: EVVDIREPWGASTGPRPLMRGSR*MSCRSR
Trigger: CCTGGACCTGCACGACATCAACCGCGAGCCCCTCAT...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS GCA 90 bp CTCAGTGGCTGTGCAGGAGTAGAGGCCACGATCGCTGAGCTGCAGTaGACGGAGCAACAAGCCCTGCTCTGTGCGCAGGAAGCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: LSGCAGVEATIAELQ*TEQQALLCAQEAVL
Trigger: GAGGACCGCTTCCTGCGCACAGAGCAGGGCTTGTTGCTCCGTGCACTGCAGCTCAGCGATCGTGGCCTCTACTCCTGCACAGCCACTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS GCA 90 bp AGGTCCCAGGTGGCCAAATGCCACAGCCACCTCCCTGGCCTCAGGTaGCATGACCTCGTGGCAGCATTTGGCCAAGCGGACCACTCCCTT +
Preference number: 5 (lower is better)
Translates to: RSQVAKCHSHLPGLR*HDLVAAFGQADHSL
Trigger: AAGGGAGTGGTCCGCTTGGCCAAATGCTGCCACGAGGTCATGGCACCTGAGGCCAGGGAGGTGGCTGTGGCATTTGGCCACCTGGGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470737.1
CDS CCA 90 bp CGGTCAGTAGGGAAGCCCAGAGAAGAAGACCGGCGACAAGCATTGTaGGAGGGGCCTAGGGCCCAGGAAGCAGGCTCCACTCTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: RSVGKPREEDRRQAL*EGPRAQEAGSTLQV
Trigger: GACCTGGAGAGTGGAGCCTGCTTCCTGGGCCCTAGGCCCCTCCCACAATGCTTGTCGCCGGTCTTCTTCTCTGGGCTTCCCTACTGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414301.5
CDS-3UTR CAA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACGGAGCGGCTCCCGTaGGGCCGGTCCGCGCTAGCG +
Preference number: 5 (lower is better)
Translates to: SLQSGPRIHVYATAQADNTERLP*GRSALA
Trigger: CGCTAGCGCGGACCGGCCCAACGGGAGCCGCTCCGT...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS CCA 90 bp ATGGTGTGGCCTGGGCGCGGCGTCCGCGGTTCACATAGGTGCACATaGGGTTGTAGGCACCTGTCCCGCACACATACAGGTGTGTTCGGT +
Preference number: 5 (lower is better)
Translates to: MVWPGRGVRGSHRCT*GCRHLSRTHTGVFG
Trigger: ACCGAACACACCTGTATGTGTGCGGGACAGGTGCCTACAACCCCATGTGCACCTATGTGAACCGCGGACGCCGCGCCCAGGCCACACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS CCA 90 bp CCTGTGCGGACTACCAGGGGCCGCCGCTGCAGAGGGTACACGGCCTaGTACATGAGTGGGTGGCTGCGCATGAAGTTGATCACCTCATCA +
Preference number: 5 (lower is better)
Translates to: PVRTTRGRRCRGYTA*YMSGWLRMKLITSS
Trigger: TGATGAGGTGATCAACTTCATGCGCAGCCACCCACTCATGTACCAGGCCGTGTACCCTCTGCAGCGGCGGCCCCTGGTAGTCCGCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
ENST00000470737.1
CDS CCA 90 bp CTTGGTGGACTTCATAGATGGCGTGAAGGTTCCACCAGGGCACTGTaGACAGGTGGCGAGTGTCAGTCCCAGGCTGCCTGGGCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LGGLHRWREGSTRAL*TGGECQSQAAWAGQ
Trigger: CTGCCCTGCCCAGGCAGCCTGGGACTGACACTCGCCACCTGTCCACAGTGCCCTGGTGGAACCTTCACGCCATCTATGAAGTCCACCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470737.1
CDS-3UTR CAA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAGTGTTGAGCAGGAAGTaGAAGAAGTGGGCGGTGCCT +
Preference number: 5 (lower is better)
Translates to: EVVDIREPWGASTGPRPLVLSRK*KKWAVP
Trigger: AGGCACCGCCCACTTCTTCAACTTCCTGCTCAACAC...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTTCGCCGTTGACATCCTaGCCTGAGAGCACGCATTCC +
Preference number: 5 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSSPLTS*PESTHS
Trigger: GGAATGCGTGCTCTCAGGCAAGGATGTCAACGGCGA...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCACCACTTAACAGTGGCTaGGGGCGAGCGGGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPPLNSG*GRAGLA
Trigger: TGCCAGCCCCGCTCGCCCCAAGCCACTGTTAAGTGG...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTCTTCTCTGTGTGCTCTaGAGGCCACCCCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSLLCVL*RPPQSP
Trigger: TGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS GCA 90 bp GGGAAGAGGGCAGCATGGACGGCGTCCCGGCCCAGTACATGCAGCTaGACTCGTGTGACGACGTGCTTAAAGTTGTTCTCAGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GKRAAWTASRPSTCS*TRVTTCLKLFSVAV
Trigger: CACAGCCACTGAGAACAACTTTAAGCACGTCGTCACACGAGTGCAGCTGCATGTACTGGGCCGGGACGCCGTCCATGCTGCCCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCACGGGTGCTGGATCCTaGAAGACCTCCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLTGAGS*KTSTSS
Trigger: GGAGGAGGTGGAGGTCTTCAAGGATCCAGCACCCGT...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS GCA 90 bp GGTAGAAGATGTAATCCTGGGCGCGGCGTCCGCGGTTCACATAGGTaGACATGGGGTTGTAGGCACCTGTCCCGCACACATACAGGTGTG +
Preference number: 5 (lower is better)
Translates to: GRRCNPGRGVRGSHR*TWGCRHLSRTHTGV
Trigger: CACACCTGTATGTGTGCGGGACAGGTGCCTACAACCCCATGTGCACCTATGTGAACCGCGGACGCCGCGCCCAGGATTACATCTTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413852.5
ENST00000414301.5
ENST00000420831.1
ENST00000434342.5
ENST00000450338.5
CDS GCA 90 bp CCTCCCACCTGGAGGAATGGGGAACAGATAGGGTGCATCCCTGCCTaGTCCAGCCACAGGTCTTCTCCCAGTACAGAGAAACCTGGACCT +
Preference number: 5 (lower is better)
Translates to: PPTWRNGEQIGCIPA*SSHRSSPSTEKPGP
Trigger: AGGTCCAGGTTTCTCTGTACTGGGAGAAGACCTGTGGCTGGAGCAGGCAGGGATGCACCCTATCTGTTCCCCATTCCTCCAGGTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS GCA 90 bp TCTCCCTCCCACCTGGAGGAATGGGGAACAGATAGGGTGCATCCCTaGCTGCTCCAGCCACAGGTCTTCTCCCAGTACAGAGAAACCTGG +
Preference number: 5 (lower is better)
Translates to: SPSHLEEWGTDRVHP*LLQPQVFSQYRETW
Trigger: CCAGGTTTCTCTGTACTGGGAGAAGACCTGTGGCTGGAGCAGGCAGGGATGCACCCTATCTGTTCCCCATTCCTCCAGGTGGGAGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS CCA 90 bp ACGACGGGTCGTTCAGCCACCGGGAGTTGTACTGATCCGTGCGCATaGCTGTCTGCTTTCCAAGTGTGCGGAAGATGGCTGCATCAGTGC +
Preference number: 5 (lower is better)
Translates to: TTGRSATGSCTDPCA*LSAFQVCGRWLHQC
Trigger: GCACTGATGCAGCCATCTTCCGCACACTTGGAAAGCAGACAGCCATGCGCACGGATCAGTACAACTCCCGGTGGCTGAACGACCCGTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000434342.5
ENST00000450338.5
CDS CCA 90 bp AGATGTAATCCTGGGCGCGGCGTCCGCGGTTCACATAGGTGCACATaGGGTTGTAGGCACCTGTCCCGCACACATACAGGTGTGTTCGGT +
Preference number: 5 (lower is better)
Translates to: RCNPGRGVRGSHRCT*GCRHLSRTHTGVFG
Trigger: ACCGAACACACCTGTATGTGTGCGGGACAGGTGCCTACAACCCCATGTGCACCTATGTGAACCGCGGACGCCGCGCCCAGGATTACATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413852.5
ENST00000414301.5
ENST00000420831.1
ENST00000434342.5
ENST00000450338.5
CDS-3UTR CAA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGGACCGGCGACAAGCATaGTGGGAGGGGCCTAGGGCC +
Preference number: 5 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMDRRQA*WEGPRA
Trigger: GGCCCTAGGCCCCTCCCACAATGCTTGTCGCCGGTC...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000002829.8
ENST00000434342.5
CDS-3UTR CAA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCGTGTTGAGCAGGAAGTaGAAGAAGTGGGCGGTGCCT +
Preference number: 5 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSVLSRK*KKWAVP
Trigger: AGGCACCGCCCACTTCTTCAACTTCCTGCTCAACAC...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAATGAGGGGCTCGCGGTaGATGTCGTGCAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTMRGSR*MSCRSR
Trigger: CCTGGACCTGCACGACATCAACCGCGAGCCCCTCAT...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGGATCGTACGGACACTaGCCCTTCCCTGACTCGAGT +
Preference number: 5 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLGSYGH*PFPDSS
Trigger: ACTCGAGTCAGGGAAGGGCAAGTGTCCGTACGATCC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp GGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCCCTTTGTCCTGTAGAGATGCTGTGTCCAGCTaGGGATCGTACGGACACTTG +
Preference number: 5 (lower is better)
Translates to: GQSVPHPSRACSLPLSCRDAVSS*GSYGHL
Trigger: CAAGTGTCCGTACGATCCCAAGCTGGACACAGCATC...TCTACAGGACAAAGGGAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTTGGGCAAAGGGCCCGTaGAAGACCATGCGAATATCA +
Preference number: 5 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSWAKGP*KTMRIS
Trigger: TGATATTCGCATGGTCTTCAACGGGCCCTTTGCCCA...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACACGGGTGCTGGATCCTaGAAGACCTCCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHTGAGS*KTSTSS
Trigger: GGAGGAGGTGGAGGTCTTCAAGGATCCAGCACCCGT...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCATTCTTGTTGGCATaGGAGTTGAACCCACGGCAC +
Preference number: 5 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSAFLLA*ELNPRH
Trigger: GTGCCGTGGGTTCAACTCCAATGCCAACAAGAATGC...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACCCACTTAACAGTGGCTaGGGGCGAGCGGGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SLQSGPRIHVYATAQADNPLNSG*GRAGLA
Trigger: TGCCAGCCCCGCTCGCCCCAAGCCACTGTTAAGTGG...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp GAAGTGGTGGACATAAGGGAGCCCTGGGGAGCCTCTACCGGCCCCAGGCCTCTAACGACGTGCTTAAAGTaGTTCTCAGTGGCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: EVVDIREPWGASTGPRPLTTCLK*FSVAVQ
Trigger: CTGCACAGCCACTGAGAACAACTTTAAGCACGTCGT...TAGAGGCCTGGGGCCGGTAGAGGCTCCCCAGGGCTCCCTTATGTCCACCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS TCA 90 bp CGATGCTGTGTCCAGCTTGGGATCGTACGGACACTTGCCCTTCCCTaGCTCGAGTCGCTCAGGCTCCAGGTAGAAGATGTAATCCTGGCG +
Preference number: 5 (lower is better)
Translates to: RCCVQLGIVRTLALP*LESLRLQVEDVILA
Trigger: CGCCAGGATTACATCTTCTACCTGGAGCCTGAGCGACTCGAGTCAGGGAAGGGCAAGTGTCCGTACGATCCCAAGCTGGACACAGCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS TCA 90 bp CGATGCTGTGTCCAGCTTGGGATCGTACGGACACTTGCCCTTCCCTaGCTCGAGTCGCTCAGGCTCCAGGTAGAAGATGTAATCCTGGGC +
Preference number: 5 (lower is better)
Translates to: RCCVQLGIVRTLALP*LESLRLQVEDVILG
Trigger: GCCCAGGATTACATCTTCTACCTGGAGCCTGAGCGACTCGAGTCAGGGAAGGGCAAGTGTCCGTACGATCCCAAGCTGGACACAGCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000413852.5
ENST00000414301.5
ENST00000420831.1
ENST00000434342.5
ENST00000450338.5
CDS GCA 90 bp TTACTCCTTCTCCCTCCCACCTGGAGGAATGGGGAACAGATAGGGTaGATCCCTGCCTGCTCCAGCCACAGGTCTTCTCCCAGTACAGAG +
Preference number: 5 (lower is better)
Translates to: LLLLPPTWRNGEQIG*IPACSSHRSSPSTE
Trigger: CTCTGTACTGGGAGAAGACCTGTGGCTGGAGCAGGCAGGGATGCACCCTATCTGTTCCCCATTCCTCCAGGTGGGAGGGAGAAGGAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS CCA 90 bp TACCAGGGGCCGCCGCTGCAGAGGGTACACGGCCTGGTACATGAGTaGGTGGCTGCGCATGAAGTTGATCACCTCATCAGGATAATCCTT +
Preference number: 5 (lower is better)
Translates to: YQGPPLQRVHGLVHE*VAAHEVDHLIRIIL
Trigger: AAGGATTATCCTGATGAGGTGATCAACTTCATGCGCAGCCACCCACTCATGTACCAGGCCGTGTACCCTCTGCAGCGGCGGCCCCTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
ENST00000470737.1
CDS CCA 90 bp TGGCCAATAAAGTGGGTTACTCCTTCTCCCTCCCACCTGGAGGAATaGGGAACAGATAGGGTGCATCCCTGCCTGCTCCAGCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: WPIKWVTPSPSHLEE*GTDRVHPCLLQPQV
Trigger: GACCTGTGGCTGGAGCAGGCAGGGATGCACCCTATCTGTTCCCCATTCCTCCAGGTGGGAGGGAGAAGGAGTAACCCACTTTATTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS-3UTR CAA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACATGAGGGGCTCGCGGTaGATGTCGTGCAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SLQSGPRIHVYATAQADNMRGSR*MSCRSR
Trigger: CCTGGACCTGCACGACATCAACCGCGAGCCCCTCAT...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACTTCCCACACTCGCCGTaGACATCCTTGCCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHFPHSP*TSLPES
Trigger: GCTCTCAGGCAAGGATGTCAACGGCGAGTGTGGGAA...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGATGCTGTGTCCAGCTaGGGATCGTACGGACACTTG +
Preference number: 5 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLDAVSS*GSYGHL
Trigger: CAAGTGTCCGTACGATCCCAAGCTGGACACAGCATC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCGAGATGGTCATGGTCTaGACGGGTGCTGGATCCTTG +
Preference number: 5 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLEMVMV*TGAGSL
Trigger: CAAGGATCCAGCACCCGTCAAGACCATGACCATCTC...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CACATCAGAAAAGGTGGACAGTCCGTGCCCCATCCGAGTAGGGCTTGCTCCCTCTTGTTGGCATTGGAGTaGAACCCACGGCACTGCCTG +
Preference number: 5 (lower is better)
Translates to: HIRKGGQSVPHPSRACSLLLALE*NPRHCL
Trigger: CAGGCAGTGCCGTGGGTTCAACTCCAATGCCAACAA...GAGGGAGCAAGCCCTACTCGGATGGGGCACGGACTGTCCACCTTTTCTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTGCCGTCTCTGACCAGCGCATTCTTGTTGGCATaGGAGTTGAACCCACGGCAC +
Preference number: 5 (lower is better)
Translates to: PTGWAWLGRLCFLPSLTSAFLLA*ELNPRH
Trigger: GTGCCGTGGGTTCAACTCCAATGCCAACAAGAATGC...GCTGGTCAGAGACGGCAGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp TCCTGGCCTGGCCCCACCAACTGGCTGGGCCTGGTTAGGCAGGCTCTGTTTTCTACGACGTGCTTAAAGTaGTTCTCAGTGGCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: SWPGPTNWLGLVRQALFSTTCLK*FSVAVQ
Trigger: CTGCACAGCCACTGAGAACAACTTTAAGCACGTCGT...AGAAAACAGAGCCTGCCTAACCAGGCCCAGCCAGTTGGTGGGGCCAGGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCACTTCTCTGTGTGCTCTaGAGGCCACCCCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPLLCVL*RPPQSP
Trigger: TGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACCTTCTCTGTGTGCTCTaGAGGCCACCCCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHLLCVL*RPPQSP
Trigger: TGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS TCA 90 bp TCAGCATGGATGAACGACGGGTCGTTCAGCCACCGGGAGTTGTACTaGTCCGTGCGCATGGCTGTCTGCTTTCCAAGTGTGCGGAAGATG +
Preference number: 5 (lower is better)
Translates to: SAWMNDGSFSHRELY*SVRMAVCFPSVRKM
Trigger: CATCTTCCGCACACTTGGAAAGCAGACAGCCATGCGCACGGATCAGTACAACTCCCGGTGGCTGAACGACCCGTCGTTCATCCATGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000434342.5
ENST00000450338.5
CDS-3UTR CAA 90 bp CTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACGATGCTGTGTCCAGCTaGGGATCGTACGGACACTTG +
Preference number: 5 (lower is better)
Translates to: LLRPPQSPKWSSHPCLCHDAVSS*GSYGHL
Trigger: CAAGTGTCCGTACGATCCCAAGCTGGACACAGCATC...GTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACGGGTGCTGGATCCTaGAAGACCTCCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLQSGPRIHVYATAQADNTGAGS*KTSTSS
Trigger: GGAGGAGGTGGAGGTCTTCAAGGATCCAGCACCCGT...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGGTGGCCTTCAGCTCTTaGAATGAGAGCCGGACCCGG +
Preference number: 5 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMVAFSS*NESRTR
Trigger: CCGGGTCCGGCTCTCATTCAAAGAGCTGAAGGCCAC...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACTCGCCGTTGACATCCTaGCCTGAGAGCACGCATTCC +
Preference number: 5 (lower is better)
Translates to: SLQSGPRIHVYATAQADNSPLTS*PESTHS
Trigger: GGAATGCGTGCTCTCAGGCAAGGATGTCAACGGCGA...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACGGATCGTACGGACACTaGCCCTTCCCTGACTCGAGT +
Preference number: 5 (lower is better)
Translates to: SLQSGPRIHVYATAQADNGSYGH*PFPDSS
Trigger: ACTCGAGTCAGGGAAGGGCAAGTGTCCGTACGATCC...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAAACTCCTGGTCATCCTaGGGCAGCACAATGACCTTC +
Preference number: 5 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPNSWSS*GSTMTF
Trigger: GAAGGTCATTGTGCTGCCCAAGGATGACCAGGAGTT...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAGAGATGGTCATGGTCTaGACGGGTGCTGGATCCTTG +
Preference number: 5 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTEMVMV*TGAGSL
Trigger: CAAGGATCCAGCACCCGTCAAGACCATGACCATCTC...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CCAGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACATTGTTGGCATTGGAGTaGAACCCACGGCACTGCCTG +
Preference number: 5 (lower is better)
Translates to: PVSKVVLASMSMPQHRLTLLALE*NPRHCL
Trigger: CAGGCAGTGCCGTGGGTTCAACTCCAATGCCAACAA...TGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CTTCTCTGTGTGCTCTTGAGGCCACCCCAGTCTCCAAAGTGGTCCTCGCATCCAGCATTCTTGTTGGCATaGGAGTTGAACCCACGGCAC +
Preference number: 5 (lower is better)
Translates to: LLCVLLRPPQSPKWSSHPAFLLA*ELNPRH
Trigger: GTGCCGTGGGTTCAACTCCAATGCCAACAAGAATGC...TGGATGCGAGGACCACTTTGGAGACTGGGGTGGCCTCAAGAGCACACAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS CCA 90 bp CTCTCTAGAAACCCAGAACCTTGCAGGAAAAAGTTGCTTTGCACATaGGTGACCCCGCAGGCCACATCATCCACACATCCATACGCCGCC +
Preference number: 5 (lower is better)
Translates to: LSRNPEPCRKKLLCT*VTPQATSSTHPYAA
Trigger: GGCGGCGTATGGATGTGTGGATGATGTGGCCTGCGGGGTCACCCATGTGCAAAGCAACTTTTTCCTGCAAGGTTCTGGGTTTCTAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426511.5
CDS-3UTR CAA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGGTGGCCTTCAGCTCTTaGAATGAGAGCCGGACCCGG +
Preference number: 5 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGVAFSS*NESRTR
Trigger: CCGGGTCCGGCTCTCATTCAAAGAGCTGAAGGCCAC...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCATCGCCGTTGACATCCTaGCCTGAGAGCACGCATTCC +
Preference number: 5 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPSPLTS*PESTHS
Trigger: GGAATGCGTGCTCTCAGGCAAGGATGTCAACGGCGA...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGTTCCCACACTCGCCGTaGACATCCTTGCCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGFPHSP*TSLPES
Trigger: GCTCTCAGGCAAGGATGTCAACGGCGAGTGTGGGAA...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGATTCCCACACTCGCCGTaGACATCCTTGCCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGFPHSP*TSLPES
Trigger: GCTCTCAGGCAAGGATGTCAACGGCGAGTGTGGGAA...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CTGAGGCAGGCTATATTCAACCCACCAATAAATACTGTCTTTGCAGGGGCAGGGGGATCGTACGGACACTaGCCCTTCCCTGACTCGAGT +
Preference number: 5 (lower is better)
Translates to: LRQAIFNPPINTVFAGAGGSYGH*PFPDSS
Trigger: ACTCGAGTCAGGGAAGGGCAAGTGTCCGTACGATCC...CCCTGCCCCTGCAAAGACAGTATTTATTGGTGGGTTGAATATAGCCTGCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp AGTCTCCAAAGTGGTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACAACTCCTGGTCATCCTaGGGCAGCACAATGACCTTC +
Preference number: 5 (lower is better)
Translates to: SLQSGPRIHVYATAQADNNSWSS*GSTMTF
Trigger: GAAGGTCATTGTGCTGCCCAAGGATGACCAGGAGTT...GTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGACCACTTTGGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CAGGCTCTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGTTGTTGGCATTGGAGTaGAACCCACGGCACTGCCTG +
Preference number: 5 (lower is better)
Translates to: QALFSAVSDQHGSKFWRMLLALE*NPRHCL
Trigger: CAGGCAGTGCCGTGGGTTCAACTCCAATGCCAACAA...CATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS GCA 90 bp ATCCGTGCGCATGGCTGTCTGCTTTCCAAGTGTGCGGAAGATGGCTaGATCAGTGCCCATAAAATCGATGTACACACCAGCATAGAGCTC +
Preference number: 5 (lower is better)
Translates to: IRAHGCLLSKCAEDG*ISAHKIDVHTSIEL
Trigger: GAGCTCTATGCTGGTGTGTACATCGATTTTATGGGCACTGATGCAGCCATCTTCCGCACACTTGGAAAGCAGACAGCCATGCGCACGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000434342.5
ENST00000450338.5
CDS GCA 90 bp GCTCCACTCTCTAGAAACCCAGAACCTTGCAGGAAAAAGTTGCTTTaGACATGGGTGACCCCGCAGGCCACATCATCCACACATCCATAC +
Preference number: 5 (lower is better)
Translates to: APLSRNPEPCRKKLL*TWVTPQATSSTHPY
Trigger: GTATGGATGTGTGGATGATGTGGCCTGCGGGGTCACCCATGTGCAAAGCAACTTTTTCCTGCAAGGTTCTGGGTTTCTAGAGAGTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426511.5
CDS CCA 90 bp GAAGTTGATCACCTCATCAGGATAATCCTTGGTGGACTTCATAGATaGCGTGAAGGTTCCACCAGGGCACTGTGGACAGGTGGCGAGTGT +
Preference number: 5 (lower is better)
Translates to: EVDHLIRIILGGLHR*REGSTRALWTGGEC
Trigger: ACACTCGCCACCTGTCCACAGTGCCCTGGTGGAACCTTCACGCCATCTATGAAGTCCACCAAGGATTATCCTGATGAGGTGATCAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470737.1
CDS-3UTR CAA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGAGTGTTGAGCAGGAAGTaGAAGAAGTGGGCGGTGCCT +
Preference number: 5 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGVLSRK*KKWAVP
Trigger: AGGCACCGCCCACTTCTTCAACTTCCTGCTCAACAC...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp GCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAAGGTGGATGGGCAAAGGGCCCGTaGAAGACCATGCGAATATCA +
Preference number: 5 (lower is better)
Translates to: ASMSMPQHRLTTHIRKGGWAKGP*KTMRIS
Trigger: TGATATTCGCATGGTCTTCAACGGGCCCTTTGCCCA...TCCACCTTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp GTCCTCGCATCCATGTCTATGCCACAGCACAGGCTGACAACACACATCAGAAAATGGGCAAAGGGCCCGTaGAAGACCATGCGAATATCA +
Preference number: 5 (lower is better)
Translates to: VLASMSMPQHRLTTHIRKWAKGP*KTMRIS
Trigger: TGATATTCGCATGGTCTTCAACGGGCCCTTTGCCCA...TTTTCTGATGTGTGTTGTCAGCCTGTGCTGTGGCATAGACATGGATGCGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS-3UTR CAA 90 bp CTGTTTTCTGCCGTCTCTGACCAGCATGGGTCTAAGTTTTGGAGGATGCTGCCAACGACGTGCTTAAAGTaGTTCTCAGTGGCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: LFSAVSDQHGSKFWRMLPTTCLK*FSVAVQ
Trigger: CTGCACAGCCACTGAGAACAACTTTAAGCACGTCGT...TGGCAGCATCCTCCAAAACTTAGACCCATGCTGGTCAGAGACGGCAGAAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS GCA 72 bp CGGGGCGTGGCCGGGAGGTGGTCCCAGGTCCTGCGCTaGGCTCGGGGCTCTCCGGACCGCCGCGGTTCGTTC +
Preference number: 6 (lower is better)
Translates to: RGVAGRWSQVLR*ARGSPDRRGSF
Trigger: GAACGAACCGCGGCGGTCCGGAGAGCCCCGAGCGCAGCGCAGGACCTGGGACCACCTCCCGGCCACGCCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413852.5
CDS CCA 72 bp CCACTCTCTAGAAACCTCTTCCGCAGCGGCGGGGCCTaGGCGCCCGGGCGGCGGCGGCGGCACGGAGCGGCT +
Preference number: 6 (lower is better)
Translates to: PLSRNLFRSGGA*APGRRRRHGAA
Trigger: AGCCGCTCCGTGCCGCCGCCGCCGCCCGGGCGCCCAGGCCCCGCCGCTGCGGAAGAGGTTTCTAGAGAGTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000002829.8
ENST00000450338.5
CDS CCA 72 bp GGGCTCTCCGGACCGCCGCGGTTCGTTCGCTCGCTCTaGTCTCGCGGCCGCCGGCGGGACGGGGCGCTCAGA +
Preference number: 6 (lower is better)
Translates to: GLSGPPRFVRSL*SRGRRRDGALR
Trigger: TCTGAGCGCCCCGTCCCGCCGGCGGCCGCGAGACCAGAGCGAGCGAACGAACCGCGGCGGTCCGGAGAGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414301.5
CDS CCA 72 bp GCACTCGGCTTCGAAGCGCTGCGCTCTCCTGGCTGCTaGACCCGGGCCGGGCGGCCGCGCTGGGCTGCACGG +
Preference number: 6 (lower is better)
Translates to: ALGFEALRSPGC*TRAGRPRWAAR
Trigger: CCGTGCAGCCCAGCGCGGCCGCCCGGCCCGGGTCCAGCAGCCAGGAGAGCGCAGCGCTTCGAAGCCGAGTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450338.5
CDS GCA 72 bp CTGGGCTGCACGGTTCCTCGCGGCGTACCCAGGTCCTaGGCTGCGCTCGGGGCTCTCCGGACCGCCGCGGTT +
Preference number: 6 (lower is better)
Translates to: LGCTVPRGVPRS*AALGALRTAAV
Trigger: AACCGCGGCGGTCCGGAGAGCCCCGAGCGCAGCGCAGGACCTGGGTACGCCGCGAGGAACCGTGCAGCCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450338.5
CDS GCA 72 bp CTGCACGGTTCCTCGCGGCGTACCCAGGTCCTGCGCTaGGCTCGGGGCTCTCCGGACCGCCGCGGTTCGTTC +
Preference number: 6 (lower is better)
Translates to: LHGSSRRTQVLR*ARGSPDRRGSF
Trigger: GAACGAACCGCGGCGGTCCGGAGAGCCCCGAGCGCAGCGCAGGACCTGGGTACGCCGCGAGGAACCGTGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450338.5
CDS TCA 72 bp CCATCCGTGGCTCTGCTGCCGCGGCCTCTGACCGCCTaGGTCTGGGTCCATGGTGTGGCCTGGGCGCGGCGT +
Preference number: 6 (lower is better)
Translates to: PSVALLPRPLTA*VWVHGVAWARR
Trigger: ACGCCGCGCCCAGGCCACACCATGGACCCAGACTCAGGCGGTCAGAGGCCGCGGCAGCAGAGCCACGGATGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS TCA 72 bp GGAGGGCACCATCCGTGGCTCTGCTGCCGCGGCCTCTaGCCGCCTGAGTCTGGGTCCATGGTGTGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: GGHHPWLCCRGL*PPESGSMVWPG
Trigger: CCCAGGCCACACCATGGACCCAGACTCAGGCGGTCAGAGGCCGCGGCAGCAGAGCCACGGATGGTGCCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS GCA 72 bp CAAATGCGCCCGATGCGGGCGTACACCGCGGGGCTCTaGGGCGCCTCTGCCGACCGCTCACGGAAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: QMRPMRAYTAGL*GASADRSRKKK
Trigger: CTTCTTCTTCCGTGAGCGGTCGGCAGAGGCGCCGCAGAGCCCCGCGGTGTACGCCCGCATCGGGCGCATTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
ENST00000450338.5
ENST00000493743.1
CDS GCA 72 bp GGGGCGAGCGGGGCTGGCACTCAAGGAAGGCTGCGCTaGCGGCCACGCCATACTGCACAGACTCCACGGCAT +
Preference number: 6 (lower is better)
Translates to: GASGAGTQGRLR*RPRHTAQTPRH
Trigger: ATGCCGTGGAGTCTGTGCAGTATGGCGTGGCCGGCAGCGCAGCCTTCCTTGAGTGCCAGCCCCGCTCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS CCA 72 bp CAAGGGCTAGGCTGGCCCATGGCAGGCACAGGCAGCTaGCCTCATGTGTCCGGAGGGTGGTGCCGGCGGTTC +
Preference number: 6 (lower is better)
Translates to: QGLGWPMAGTGS*PHVSGGWCRRF
Trigger: GAACCGCCGGCACCACCCTCCGGACACATGAGGCCAGCTGCCTGTGCCTGCCATGGGCCAGCCTAGCCCTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS CAA 90 bp GCGCCGGTCACCAGGATCTCGCTGGAACAGCCACTTAACAGTGGCTaGGGGCGAGCGGGGCTGGCACTCAAGGAAGGCTGCGCTGCCGGC +
Preference number: 6 (lower is better)
Translates to: APVTRISLEQPLNSG*GRAGLALKEGCAAG
Trigger: GCCGGCAGCGCAGCCTTCCTTGAGTGCCAGCCCCGCTCGCCCCAAGCCACTGTTAAGTGGCTGTTCCAGCGAGATCCTGGTGACCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS GCA 72 bp AGTGACCACCGTCATCGTTCAGGCAAATGCGCCCGATaGGGGCGTACACCGCGGGGCTCTGCGGCGCCTCTG +
Preference number: 6 (lower is better)
Translates to: SDHRHRSGKCAR*GRTPRGSAAPL
Trigger: CAGAGGCGCCGCAGAGCCCCGCGGTGTACGCCCGCATCGGGCGCATTTGCCTGAACGATGACGGTGGTCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
ENST00000450338.5
ENST00000493743.1
CDS CCA 72 bp GGGGCGCTCATGGACAGTGGTGGGAAGAGGGCAGCATaGACGGCGTCCCGGCCCAGTACATGCAGCTGCACT +
Preference number: 6 (lower is better)
Translates to: GALMDSGGKRAA*TASRPSTCSCT
Trigger: AGTGCAGCTGCATGTACTGGGCCGGGACGCCGTCCATGCTGCCCTCTTCCCACCACTGTCCATGAGCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS TCA 72 bp GCCCTGGGGCCACAGGGAAGGGTTGACATCCTTGCCTaGGAGCACGCATTCCTCGATGCGCTGTGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: ALGPQGRVDILA*EHAFLDALWGG
Trigger: GCCTCCCCACAGCGCATCGAGGAATGCGTGCTCTCAGGCAAGGATGTCAACCCTTCCCTGTGGCCCCAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420831.1
CDS GCA 72 bp GTGTGGCCTGGGCGCGGCGTCCGCGGTTCACATAGGTaGACATGGGGTTGTAGGCACCTGTCCCGCACACAT +
Preference number: 6 (lower is better)
Translates to: VWPGRGVRGSHR*TWGCRHLSRTH
Trigger: ATGTGTGCGGGACAGGTGCCTACAACCCCATGTGCACCTATGTGAACCGCGGACGCCGCGCCCAGGCCACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002829.8
CDS CAA 90 bp CCCCGGTCAGTAGGGAAGCCCAGAGAAGAAGACCGGCGACAAGCATaGTGGGAGGGGCCTAGGGCCCAGGAAGCAGGCTCCACTCTCCAG +
Preference number: 6 (lower is better)
Translates to: PRSVGKPREEDRRQA*WEGPRAQEAGSTLQ
Trigger: CTGGAGAGTGGAGCCTGCTTCCTGGGCCCTAGGCCCCTCCCACAATGCTTGTCGCCGGTCTTCTTCTCTGGGCTTCCCTACTGACCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414301.5
CDS GCA 72 bp GTGGCCAAATGCCACAGCCACCTCCCTGGCCTCAGGTaGCATGACCTCGTGGCAGCATTTGGCCAAGCGGAC +
Preference number: 6 (lower is better)
Translates to: VAKCHSHLPGLR*HDLVAAFGQAD
Trigger: GTCCGCTTGGCCAAATGCTGCCACGAGGTCATGGCACCTGAGGCCAGGGAGGTGGCTGTGGCATTTGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470737.1
CDS CCA 72 bp GGGAAGCCCAGAGAAGAAGACCGGCGACAAGCATTGTaGGAGGGGCCTAGGGCCCAGGAAGCAGGCTCCACT +
Preference number: 6 (lower is better)
Translates to: GKPREEDRRQAL*EGPRAQEAGST
Trigger: AGTGGAGCCTGCTTCCTGGGCCCTAGGCCCCTCCCACAATGCTTGTCGCCGGTCTTCTTCTCTGGGCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000414301.5
ENST00000426511.5
ENST00000434342.5
ENST00000450338.5
CDS CCA 72 bp CCTGGGCGCGGCGTCCGCGGTTCACATAGGTGCACATaGGGTTGTAGGCACCTGTCCCGCACACATACAGGT +
Preference number: 6 (lower is better)
Translates to: PGRGVRGSHRCT*GCRHLSRTHTG
Trigger: ACCTGTATGTGTGCGGGACAGGTGCCTACAACCCCATGTGCACCTATGTGAACCGCGGACGCCGCGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000420831.1
ENST00000434342.5
ENST00000450338.5
CDS CCA 72 bp CCAGGATCTCGCTGGAACAGCCACTTAACAGTGGCTTaGGGCGAGCGGGGCTGGCACTCAAGGAAGGCTGCG +
Preference number: 6 (lower is better)
Translates to: PGSRWNSHLTVA*GERGWHSRKAA
Trigger: CGCAGCCTTCCTTGAGTGCCAGCCCCGCTCGCCCCAAGCCACTGTTAAGTGGCTGTTCCAGCGAGATCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS CCA 72 bp GCACGAATCTCTCGGCGCCGGTCACCAGGATCTCGCTaGAACAGCCACTTAACAGTGGCTTGGGGCGAGCGG +
Preference number: 6 (lower is better)
Translates to: ARISRRRSPGSR*NSHLTVAWGER
Trigger: CCGCTCGCCCCAAGCCACTGTTAAGTGGCTGTTCCAGCGAGATCCTGGTGACCGGCGCCGAGAGATTCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS CAA 72 bp GTAGGGAAGCCCAGAGAAGAAGACCGGCGACAAGCATaGTGGGAGGGGCCTAGGGCCCAGGAAGCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: VGKPREEDRRQA*WEGPRAQEAGS
Trigger: GGAGCCTGCTTCCTGGGCCCTAGGCCCCTCCCACAATGCTTGTCGCCGGTCTTCTTCTCTGGGCTTCCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000414301.5
ENST00000426511.5
ENST00000434342.5
ENST00000450338.5
CDS CAA 72 bp TCCCTGGCCTCAGGTGCCATGACCTCGTGGCAGCATTaGGCCAAGCGGACCACTCCCTTCCATGTCCCCCTC +
Preference number: 6 (lower is better)
Translates to: SLASGAMTSWQH*AKRTTPFHVPL
Trigger: GAGGGGGACATGGAAGGGAGTGGTCCGCTTGGCCAAATGCTGCCACGAGGTCATGGCACCTGAGGCCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470737.1
CDS TCA 72 bp CAAATGCCACAGCCACCTCCCTGGCCTCAGGTGCCATaGCCTCGTGGCAGCATTTGGCCAAGCGGACCACTC +
Preference number: 6 (lower is better)
Translates to: QMPQPPPWPQVP*PRGSIWPSGPL
Trigger: GAGTGGTCCGCTTGGCCAAATGCTGCCACGAGGTCATGGCACCTGAGGCCAGGGAGGTGGCTGTGGCATTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470737.1
CDS GCA 72 bp CGATCGCTGAGCTGCAGTGCACGGAGCAACAAGCCCTaGTCTGTGCGCAGGAAGCGGTCCTCTGCACGAATC +
Preference number: 6 (lower is better)
Translates to: RSLSCSARSNKP*SVRRKRSSARI
Trigger: GATTCGTGCAGAGGACCGCTTCCTGCGCACAGAGCAGGGCTTGTTGCTCCGTGCACTGCAGCTCAGCGATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS GCA 72 bp CTCCCTCCCACCTGGAGGAATGGGGAACAGATAGGGTaGATCCCTGCCTGCTCCAGCCACAGGTCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: LPPTWRNGEQIG*IPACSSHRSSP
Trigger: GGGAGAAGACCTGTGGCTGGAGCAGGCAGGGATGCACCCTATCTGTTCCCCATTCCTCCAGGTGGGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS CCA 72 bp ACTACCAGGGGCCGCCGCTGCAGAGGGTACACGGCCTaGTACATGAGTGGGTGGCTGCGCATGAAGTTGATC +
Preference number: 6 (lower is better)
Translates to: TTRGRRCRGYTA*YMSGWLRMKLI
Trigger: GATCAACTTCATGCGCAGCCACCCACTCATGTACCAGGCCGTGTACCCTCTGCAGCGGCGGCCCCTGGTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
ENST00000470737.1
CDS CCA 72 bp ACAGCCACCTCCCTGGCCTCAGGTGCCATGACCTCGTaGCAGCATTTGGCCAAGCGGACCACTCCCTTCCAT +
Preference number: 6 (lower is better)
Translates to: TATSLASGAMTS*QHLAKRTTPFH
Trigger: ATGGAAGGGAGTGGTCCGCTTGGCCAAATGCTGCCACGAGGTCATGGCACCTGAGGCCAGGGAGGTGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470737.1
CDS CAA 72 bp GCCGATGCTGTGTCCAGCTTGGGATCGTACGGACACTaGCCCTTCCCTGACTCGAGTCGCTCAGGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ADAVSSLGSYGH*PFPDSSRSGSR
Trigger: CCTGGAGCCTGAGCGACTCGAGTCAGGGAAGGGCAAGTGTCCGTACGATCCCAAGCTGGACACAGCATCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000420831.1
ENST00000434342.5
ENST00000450338.5
CDS CAA 72 bp ACCAGGATCTCGCTGGAACAGCCACTTAACAGTGGCTaGGGGCGAGCGGGGCTGGCACTCAAGGAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: TRISLEQPLNSG*GRAGLALKEGC
Trigger: GCAGCCTTCCTTGAGTGCCAGCCCCGCTCGCCCCAAGCCACTGTTAAGTGGCTGTTCCAGCGAGATCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS TCA 72 bp GACGAAGTTCCCACACTCGCCGTTGACATCCTTGCCTaGGAGCACGCATTCCTCGATGCGCTGTGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: DEVPTLAVDILA*EHAFLDALWGG
Trigger: GCCTCCCCACAGCGCATCGAGGAATGCGTGCTCTCAGGCAAGGATGTCAACGGCGAGTGTGGGAACTTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000434342.5
ENST00000450338.5
CDS TCA 72 bp GCTCCTCCAACTCCTGGTCATCCTTGGGCAGCACAATaGCCTTCTGCACTGTCCCGCGGTCTGTGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: APPTPGHPWAAQ*PSALSRGLCPG
Trigger: TCCTGGGCACAGACCGCGGGACAGTGCAGAAGGTCATTGTGCTGCCCAAGGATGACCAGGAGTTGGAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS GCA 72 bp CCGATGCTGTGTCCAGCTTGGGATCGTACGGACACTTaGCCTTCCCTGACTCGAGTCGCTCAGGCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: PMLCPAWDRTDT*PSLTRVAQAPG
Trigger: ACCTGGAGCCTGAGCGACTCGAGTCAGGGAAGGGCAAGTGTCCGTACGATCCCAAGCTGGACACAGCATCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000420831.1
ENST00000434342.5
ENST00000450338.5
CDS GCA 72 bp TGTGCCCAGGAAAAGCACCTCATAGCGCCCGTCGGCTaGATCCACCTGGTCCACGGCAATAGTGGTAAGGCG +
Preference number: 6 (lower is better)
Translates to: CAQEKHLIAPVG*IHLVHGNSGKA
Trigger: CGCCTTACCACTATTGCCGTGGACCAGGTGGATGCAGCCGACGGGCGCTATGAGGTGCTTTTCCTGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
ENST00000470737.1
CDS GCA 72 bp TGTAATCCTGGGCGCGGCGTCCGCGGTTCACATAGGTaGACATGGGGTTGTAGGCACCTGTCCCGCACACAT +
Preference number: 6 (lower is better)
Translates to: CNPGRGVRGSHR*TWGCRHLSRTH
Trigger: ATGTGTGCGGGACAGGTGCCTACAACCCCATGTGCACCTATGTGAACCGCGGACGCCGCGCCCAGGATTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000413852.5
ENST00000414301.5
ENST00000420831.1
ENST00000434342.5
ENST00000450338.5
CDS GCA 72 bp GGGCAGGCTGGAGCCATTAGCTTCAGAAGAGGCCGCTaGACTGTCTGTCCCCACTACCTCAACCTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: GQAGAISFRRGR*TVCPHYLNLLL
Trigger: GAGGAGCAGGTTGAGGTAGTGGGGACAGACAGTGCAGCGGCCTCTTCTGAAGCTAATGGCTCCAGCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470737.1
CDS CCA 72 bp CCGCCGCTGCAGAGGGTACACGGCCTGGTACATGAGTaGGTGGCTGCGCATGAAGTTGATCACCTCATCAGG +
Preference number: 6 (lower is better)
Translates to: PPLQRVHGLVHE*VAAHEVDHLIR
Trigger: CCTGATGAGGTGATCAACTTCATGCGCAGCCACCCACTCATGTACCAGGCCGTGTACCCTCTGCAGCGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
ENST00000470737.1
CDS CCA 72 bp GTCCCGCACACATACAGGTGTGTTCGGTTCCAGGGCTaGATGAGCCTGACGAAGTTCCCACACTCGCCCTGG +
Preference number: 6 (lower is better)
Translates to: VPHTYRCVRFQG*MSLTKFPHSPW
Trigger: CCAGGGCGAGTGTGGGAACTTCGTCAGGCTCATCCAGCCCTGGAACCGAACACACCTGTATGTGTGCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420831.1
CDS GCA 72 bp CAAACACGTCCTGGAGCTCATCAAAGTGAGTCTCAATaGCATCCTCGCCCGGGACAGAGCAGACGAGCCGCG +
Preference number: 6 (lower is better)
Translates to: QTRPGAHQSESQ*HPRPGQSRRAA
Trigger: CGCGGCTCGTCTGCTCTGTCCCGGGCGAGGATGGCATTGAGACTCACTTTGATGAGCTCCAGGACGTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
ENST00000450338.5
ENST00000493743.1
CDS GCA 72 bp CCAAGTTTCTGCCCTGCACCTGACCTCTACAGGTCCTaGTCTGGCCAAGGTCCCAGGTGGCCAAATGCCACA +
Preference number: 6 (lower is better)
Translates to: PSFCPAPDLYRS*SGQGPRWPNAT
Trigger: TGTGGCATTTGGCCACCTGGGACCTTGGCCAGAGCAGGACCTGTAGAGGTCAGGTGCAGGGCAGAAACTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470737.1
CDS CCA 72 bp GTCCCGCACACATACAGGTGTGTTCGGTTCCAGGGCTaGATGAGCCTGACGAAGTTCCCACACTCGCCGTTG +
Preference number: 6 (lower is better)
Translates to: VPHTYRCVRFQG*MSLTKFPHSPL
Trigger: CAACGGCGAGTGTGGGAACTTCGTCAGGCTCATCCAGCCCTGGAACCGAACACACCTGTATGTGTGCGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000434342.5
ENST00000450338.5
CDS GCA 72 bp ACGGGTCGTTCAGCCACCGGGAGTTGTACTGATCCGTaGGCATGGCTGTCTGCTTTCCAAGTGTGCGGAAGA +
Preference number: 6 (lower is better)
Translates to: TGRSATGSCTDP*AWLSAFQVCGR
Trigger: TCTTCCGCACACTTGGAAAGCAGACAGCCATGCGCACGGATCAGTACAACTCCCGGTGGCTGAACGACCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000434342.5
ENST00000450338.5
CDS GCA 72 bp GCAGCATGGACGGCGTCCCGGCCCAGTACATGCAGCTaGACTCGTGTGACGACGTGCTTAAAGTTGTTCTCA +
Preference number: 6 (lower is better)
Translates to: AAWTASRPSTCS*TRVTTCLKLFS
Trigger: TGAGAACAACTTTAAGCACGTCGTCACACGAGTGCAGCTGCATGTACTGGGCCGGGACGCCGTCCATGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000434342.5
CDS GCA 72 bp CACCTGGAGGAATGGGGAACAGATAGGGTGCATCCCTaGCTGCTCCAGCCACAGGTCTTCTCCCAGTACAGA +
Preference number: 6 (lower is better)
Translates to: HLEEWGTDRVHP*LLQPQVFSQYR
Trigger: TCTGTACTGGGAGAAGACCTGTGGCTGGAGCAGGCAGGGATGCACCCTATCTGTTCCCCATTCCTCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS CCA 72 bp CGTTCAGCCACCGGGAGTTGTACTGATCCGTGCGCATaGCTGTCTGCTTTCCAAGTGTGCGGAAGATGGCTG +
Preference number: 6 (lower is better)
Translates to: RSATGSCTDPCA*LSAFQVCGRWL
Trigger: CAGCCATCTTCCGCACACTTGGAAAGCAGACAGCCATGCGCACGGATCAGTACAACTCCCGGTGGCTGAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000434342.5
ENST00000450338.5
CDS CCA 72 bp TCATTGCGCTCCGCACTGTCAGGAATGAGCTCAGCATaGATGAACGACGGGTCGTTCAGCCACCGGGAGTTG +
Preference number: 6 (lower is better)
Translates to: SLRSALSGMSSA*MNDGSFSHREL
Trigger: CAACTCCCGGTGGCTGAACGACCCGTCGTTCATCCATGCTGAGCTCATTCCTGACAGTGCGGAGCGCAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000434342.5
ENST00000450338.5
CDS CAA 72 bp AGCTCCTCATTGATGAGGGCCGATGCTGTGTCCAGCTaGGGATCGTACGGACACTTGCCCTTCCCTGACTCG +
Preference number: 6 (lower is better)
Translates to: SSSLMRADAVSS*GSYGHLPFPDS
Trigger: CGAGTCAGGGAAGGGCAAGTGTCCGTACGATCCCAAGCTGGACACAGCATCGGCCCTCATCAATGAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000434342.5
ENST00000450338.5
CDS TCA 72 bp GTCCAGCTTGGGATCGTACGGACACTTGCCCTTCCCTaGCTCGAGTCGCTCAGGCTCCAGGTAGAAGATGTA +
Preference number: 6 (lower is better)
Translates to: VQLGIVRTLALP*LESLRLQVEDV
Trigger: TACATCTTCTACCTGGAGCCTGAGCGACTCGAGTCAGGGAAGGGCAAGTGTCCGTACGATCCCAAGCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000420831.1
ENST00000434342.5
ENST00000450338.5
CDS TCA 72 bp ATGAACGACGGGTCGTTCAGCCACCGGGAGTTGTACTaGTCCGTGCGCATGGCTGTCTGCTTTCCAAGTGTG +
Preference number: 6 (lower is better)
Translates to: MNDGSFSHRELY*SVRMAVCFPSV
Trigger: CACACTTGGAAAGCAGACAGCCATGCGCACGGATCAGTACAACTCCCGGTGGCTGAACGACCCGTCGTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000434342.5
ENST00000450338.5
CDS GCA 72 bp CACACCAGCATAGAGCTCCTCATTGATGAGGGCCGATaGTGTGTCCAGCTTGGGATCGTACGGACACTTGCC +
Preference number: 6 (lower is better)
Translates to: HTSIELLIDEGR*CVQLGIVRTLA
Trigger: GGCAAGTGTCCGTACGATCCCAAGCTGGACACAGCATCGGCCCTCATCAATGAGGAGCTCTATGCTGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000434342.5
ENST00000450338.5
CDS GCA 72 bp TGGAGGAATGGGGAACAGATAGGGTGCATCCCTGCCTaGTCCAGCCACAGGTCTTCTCCCAGTACAGAGAAA +
Preference number: 6 (lower is better)
Translates to: WRNGEQIGCIPA*SSHRSSPSTEK
Trigger: TTTCTCTGTACTGGGAGAAGACCTGTGGCTGGAGCAGGCAGGGATGCACCCTATCTGTTCCCCATTCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434342.5
CDS TCA 72 bp CAGAACCTTGCAGGAAAAAGTTGCTTTGCACATGGGTaGCCCCGCAGGCCACATCATCCACACATCCATACG +
Preference number: 6 (lower is better)
Translates to: QNLAGKSCFAHG*PRRPHHPHIHT
Trigger: CGTATGGATGTGTGGATGATGTGGCCTGCGGGGTCACCCATGTGCAAAGCAACTTTTTCCTGCAAGGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426511.5
CDS CCA 72 bp AACCCAGAACCTTGCAGGAAAAAGTTGCTTTGCACATaGGTGACCCCGCAGGCCACATCATCCACACATCCA +
Preference number: 6 (lower is better)
Translates to: NPEPCRKKLLCT*VTPQATSSTHP
Trigger: TGGATGTGTGGATGATGTGGCCTGCGGGGTCACCCATGTGCAAAGCAACTTTTTCCTGCAAGGTTCTGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426511.5
CDS CAA 72 bp CCACTCTCTAGAAACCCAGAACCTTGCAGGAAAAAGTaGCTTTGCACATGGGTGACCCCGCAGGCCACATCA +
Preference number: 6 (lower is better)
Translates to: PLSRNPEPCRKK*LCTWVTPQATS
Trigger: TGATGTGGCCTGCGGGGTCACCCATGTGCAAAGCAACTTTTTCCTGCAAGGTTCTGGGTTTCTAGAGAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426511.5
CDS GCA 72 bp CATGGCTGTCTGCTTTCCAAGTGTGCGGAAGATGGCTaGATCAGTGCCCATAAAATCGATGTACACACCAGC +
Preference number: 6 (lower is better)
Translates to: HGCLLSKCAEDG*ISAHKIDVHTS
Trigger: GCTGGTGTGTACATCGATTTTATGGGCACTGATGCAGCCATCTTCCGCACACTTGGAAAGCAGACAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000002829.8
ENST00000413852.5
ENST00000414301.5
ENST00000434342.5
ENST00000450338.5