Pregenerated sensors for SEMA3D (Homo sapiens)
Ensembl gene IDs: ENSG00000153993Ensembl transcript IDs: ENST00000284136.10, ENST00000284136.11, ENST00000444867.1, ENST00000463315.1, ENST00000484038.1
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAAACAGAAGAAGGCTAAGGGTTCTGTGTTACAAGAAGGAAAGGTaGGTTCTGCTTAAACAGACAGGAAACACACCATGCATATTCAGA | + |
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Preference number: 1 (lower is better) Translates to: QNRRRLRVLCYKKER*VLLKQTGNTPCIFR Trigger: TCTGAATATGCATGGTGTGTTTCCTGTCTGTTTAAGCAGAACTCACCTTTCCTTCTTGTAACACAGAACCCTTAGCCTTCTTCTGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR GCA 90 bp | GAGAGAGAATGCTCTCAACATAGAGCCACAGATCTTGCATTAAGTTaGCCTCTAATCACAGGGTTTTCTCACAGACTTTTCTTTCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: ERECSQHRATDLALS*PLITGFSHRLFFQD Trigger: ATCTTGAAAGAAAAGTCTGTGAGAAAACCCTGTGATTAGAGGGCAACTTAATGCAAGATCTGTGGCTCTATGTTGAGAGCATTCTCTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR CAA 90 bp | TGGCTCACTGAGAAAGTTCCTGTTGATAATGGGAGTTGTCTTAATTaGTGTCTGACCTCTTATTCCCTACCACAAGGTAGCTGGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: WLTEKVPVDNGSCLN*CLTSYSLPQGSWFS Trigger: TGAGAACCAGCTACCTTGTGGTAGGGAATAAGAGGTCAGACACAAATTAAGACAACTCCCATTATCAACAGGAACTTTCTCAGTGAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAGTGAATGGCTCACTGAGAAAGTTCCTGTTGATAATGGGAGTTGTCTTACTACCACAAGGTAGCTaGTTCTCAATAGGAATGATA | + |
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Preference number: 2 (lower is better) Translates to: PGVNGSLRKFLLIMGVVLLPQGS*FSIGMI Trigger: TATCATTCCTATTGAGAACCAGCTACCTTGTGGTAG...TAAGACAACTCCCATTATCAACAGGAACTTTCTCAGTGAGCCATTCACTCCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR-3UTR TCA 90 bp | TCCCATCTGCATGCCTTCCCATCAGGATGCATTATACATCATTATGTTTTCCTTGTCTTAATTTGTGTCTaGCCTCTTATTCCCTACCAC | + |
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Preference number: 2 (lower is better) Translates to: SHLHAFPSGCIIHHYVFLVLICV*PLIPYH Trigger: GTGGTAGGGAATAAGAGGTCAGACACAAATTAAGAC...AAGGAAAACATAATGATGTATAATGCATCCTGATGGGAAGGCATGCAGATGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR-3UTR GCA 90 bp | TCCCATCTGCATGCCTTCCCATCAGGATGCATTATACATCATTATGTTTTCCTTCAGATTATTGTCTTGTaGCTTAGCAAAACTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: SHLHAFPSGCIIHHYVFLQIIVL*LSKTPW Trigger: CCATGGAGTTTTGCTAAGGCACAAGACAATAATCTG...AAGGAAAACATAATGATGTATAATGCATCCTGATGGGAAGGCATGCAGATGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR-3UTR GCA 90 bp | TCCCATCTGCATGCCTTCCCATCAGGATGCATTATACATCATTATGTTTTCCTTATCAAATTCGGGGCTTaGTTAGCTCAACTATTTACA | + |
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Preference number: 2 (lower is better) Translates to: SHLHAFPSGCIIHHYVFLIKFGA*LAQLFT Trigger: TGTAAATAGTTGAGCTAAGCAAGCCCCGAATTTGAT...AAGGAAAACATAATGATGTATAATGCATCCTGATGGGAAGGCATGCAGATGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR-3UTR CCA 90 bp | TCCCATCTGCATGCCTTCCCATCAGGATGCATTATACATCATTATGTTTTCCTTCTTAGCAAAACTCCATaGGAAGCATTTATGAATTAC | + |
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Preference number: 2 (lower is better) Translates to: SHLHAFPSGCIIHHYVFLLSKTP*EAFMNY Trigger: GTAATTCATAAATGCTTCCCATGGAGTTTTGCTAAG...AAGGAAAACATAATGATGTATAATGCATCCTGATGGGAAGGCATGCAGATGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR CAA 90 bp | ACATTCGAGGGAATAAAGCACCTTATACACTATCAAATTCGGGGCTaGCTTAGCTCAACTATTTACATGACAATAAATTCCAAAACTCAA | + |
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Preference number: 2 (lower is better) Translates to: TFEGIKHLIHYQIRG*LSSTIYMTINSKTQ Trigger: TTGAGTTTTGGAATTTATTGTCATGTAAATAGTTGAGCTAAGCAAGCCCCGAATTTGATAGTGTATAAGGTGCTTTATTCCCTCGAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR CAA 90 bp | TTCCCACTTAATTGCTTTGAGCTCGCTATGAGTTCCTGGAATATTTaGTCCAAGCAAATCTATAATTACAAACACTGTTGTTACGCTATT | + |
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Preference number: 2 (lower is better) Translates to: FPLNCFELAMSSWNI*SKQIYNYKHCCYAI Trigger: AATAGCGTAACAACAGTGTTTGTAATTATAGATTTGCTTGGACAAAATATTCCAGGAACTCATAGCGAGCTCAAAGCAATTAAGTGGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR TCA 72 bp | AGAAGGCTAAGGGTTCTGTGTTACAAGAAGGAAAGGTaGGTTCTGCTTAAACAGACAGGAAACACACCATGC | + |
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Preference number: 3 (lower is better) Translates to: RRLRVLCYKKER*VLLKQTGNTPC Trigger: GCATGGTGTGTTTCCTGTCTGTTTAAGCAGAACTCACCTTTCCTTCTTGTAACACAGAACCCTTAGCCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR-3UTR CAA 90 bp | CCAGGAGTGAATGGCTCACTGAGAAAGTTCCTGTTGATAATGGGAGTTGTCTTATTGCTTGTGCAAGATTaGTTCTTGGAAAACTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: PGVNGSLRKFLLIMGVVLLLVQD*FLENWF Trigger: GAACCAGTTTTCCAAGAACAAATCTTGCACAAGCAA...TAAGACAACTCCCATTATCAACAGGAACTTTCTCAGTGAGCCATTCACTCCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR TCA 72 bp | TTCCTGTTGATAATGGGAGTTGTCTTAATTTGTGTCTaGCCTCTTATTCCCTACCACAAGGTAGCTGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: FLLIMGVVLICV*PLIPYHKVAGS Trigger: AGAACCAGCTACCTTGTGGTAGGGAATAAGAGGTCAGACACAAATTAAGACAACTCCCATTATCAACAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR-3UTR CAA 90 bp | CCAGGAGTGAATGGCTCACTGAGAAAGTTCCTGTTGATAATGGGAGTTGTCTTAATTCAGATTATTGTCTaGTGCCTTAGCAAAACTCCA | + |
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Preference number: 3 (lower is better) Translates to: PGVNGSLRKFLLIMGVVLIQIIV*CLSKTP Trigger: TGGAGTTTTGCTAAGGCACAAGACAATAATCTGAAT...TAAGACAACTCCCATTATCAACAGGAACTTTCTCAGTGAGCCATTCACTCCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR-3UTR CAA 90 bp | TCCCATCTGCATGCCTTCCCATCAGGATGCATTATACATCATTATGTTTTCCTTTATCAAATTCGGGGCTaGCTTAGCTCAACTATTTAC | + |
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Preference number: 3 (lower is better) Translates to: SHLHAFPSGCIIHHYVFLYQIRG*LSSTIY Trigger: GTAAATAGTTGAGCTAAGCAAGCCCCGAATTTGATA...AAGGAAAACATAATGATGTATAATGCATCCTGATGGGAAGGCATGCAGATGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR-3UTR CAA 90 bp | TCCCATCTGCATGCCTTCCCATCAGGATGCATTATACATCATTATGTTTTCCTTCTGAGAAAGTTCCTGTaGATAATGGGAGTTGTCTTA | + |
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Preference number: 3 (lower is better) Translates to: SHLHAFPSGCIIHHYVFLLRKFL*IMGVVL Trigger: TAAGACAACTCCCATTATCAACAGGAACTTTCTCAG...AAGGAAAACATAATGATGTATAATGCATCCTGATGGGAAGGCATGCAGATGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR CCA 72 bp | TTGTGTCTGACCTCTTATTCCCTACCACAAGGTAGCTaGTTCTCAATAGGAATGATATATCTGTTCATAAGA | + |
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Preference number: 3 (lower is better) Translates to: LCLTSYSLPQGS*FSIGMIYLFIR Trigger: TCTTATGAACAGATATATCATTCCTATTGAGAACCAGCTACCTTGTGGTAGGGAATAAGAGGTCAGACACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR TCA 72 bp | TCTTGTGCCTTAGCAAAACTCCATGGGAAGCATTTATaGATTACTATAAGGGATATACAAAACAGAAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: SCALAKLHGKHL*ITIRDIQNRRQ Trigger: TTGCCTTCTGTTTTGTATATCCCTTATAGTAATTCATAAATGCTTCCCATGGAGTTTTGCTAAGGCACAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR CCA 72 bp | TTCCCACTTAATTGCTTTGAGCTCGCTATGAGTTCCTaGAATATTTTGTCCAAGCAAATCTATAATTACAAA | + |
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Preference number: 3 (lower is better) Translates to: FPLNCFELAMSS*NILSKQIYNYK Trigger: TTTGTAATTATAGATTTGCTTGGACAAAATATTCCAGGAACTCATAGCGAGCTCAAAGCAATTAAGTGGGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| CDS-3UTR TCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAAAGCCGCAGCCCTGGCTaGGCAAGCGGAGCCGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQSRSPG*ASGAAG Trigger: GCCGGCGGCTCCGCTTGCTCAGCCAGGGCTGCGGCT...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | ATTAAGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCCGGCGCGCGTTCCTCTaGGCCGCAGCCCTGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: IKFKRYSVDEGTYSPQALRRAFL*AAALAE Trigger: CTCAGCCAGGGCTGCGGCTCAGAGGAACGCGCGCCG...GAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACTTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAAGAACGGGATGCAGGCTaGGGTCCAGCGGCGCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQERDAG*GPAARQ Trigger: TTGCCGCGCCGCTGGACCTCAGCCTGCATCCCGTTC...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CCA 90 bp | ATTAAGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCTCTGAGCCGCAGCCCTaGCTGAGCAAGCGGAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: IKFKRYSVDEGTYSPQALSEPQP*LSKRSR Trigger: GCGGCTCCGCTTGCTCAGCCAGGGCTGCGGCTCAGA...GAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CCA 90 bp | AGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGCCCTCTCTCTTTTCCTaGTGCCTTTTCAGGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SLKDILWMKALIRLRLSLPSLFS*CLFRER Trigger: CCTCTCCCTGAAAAGGCACCAGGAAAAGAGAGAGGG...CAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAAGCCCAAGGGATCGAGTaGATGCAGTATCTTTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQAQGIE*MQYLCQ Trigger: TTGGCAAAGATACTGCATTCACTCGATCCCTTGGGC...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR GCA 90 bp | AGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGCTCCCAAGAGCAGCCTaGCTCTTTCCTCATCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: SLKDILWMKALIRLRLSLLPRAA*LFPHLR Trigger: TCTTAGATGAGGAAAGAGGCAGGCTGCTCTTGGGAG...CAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAATGTAAAGACCTGCTGTaGACTCTTCTCTCCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQCKDLL*TLLSLS Trigger: AGAGAGGGAGAGAAGAGTTCACAGCAGGTCTTTACA...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | ATTAAGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCCTGCAGTTGGTAAGGTaGAGATCCAGGAGAACCAAC | + |
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Preference number: 4 (lower is better) Translates to: IKFKRYSVDEGTYSPQALLQLVR*RSRRTN Trigger: GTTGGTTCTCCTGGATCTTCACCTTACCAACTGCAG...GAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | AGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGGAAGCAAAAGGCTGCTaGGGATCGAAAGGACATTTC | + |
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Preference number: 4 (lower is better) Translates to: SLKDILWMKALIRLRLSLEAKGC*GSKGHF Trigger: GAAATGTCCTTTCGATCCTCAGCAGCCTTTTGCTTC...CAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | AGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGCTCATCTGTCATTACTaGAGCAAAAGGCTGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SLKDILWMKALIRLRLSLLICHY*SKRLLR Trigger: CCTCAGCAGCCTTTTGCTTCAGTAATGACAGATGAG...CAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR GCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAACCAAGTGTAAAGACCTaGTGTGAACTCTTCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQPSVKT*CELFSP Trigger: GGGAGAGAAGAGTTCACAGCAGGTCTTTACACTTGG...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CCA 90 bp | AGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGGTATGTTCAAAAGCCTaGCAACCAGGACAGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: SLKDILWMKALIRLRLSLVCSKA*QPGQQM Trigger: CATCTGCTGTCCTGGTTGCCAGGCTTTTGAACATAC...CAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | AGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGCTGAAATGTCAGTTCTaGTGTAGTGGTGGTCATGAG | + |
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Preference number: 4 (lower is better) Translates to: SLKDILWMKALIRLRLSLLKCQF*CSGGHE Trigger: CTCATGACCACCACTACATCAGAACTGACATTTCAG...CAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAAGCCTCAGGCTCTCATTaGTCAATATTGCCCAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQASGSH*SILPSK Trigger: TTTACTGGGCAATATTGATCAATGAGAGCCTGAGGC...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CCA 90 bp | ATTAAGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCCTGAGTAGAAAGATGTaGTCTTTGGCTCCCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: IKFKRYSVDEGTYSPQALLSRKM*SLAPKS Trigger: GCTCTTGGGAGCCAAAGACCACATCTTTCTACTCAG...GAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| 3UTR CAA 72 bp | GAGAAAGTTCCTGTTGATAATGGGAGTTGTCTTAATTaGTGTCTGACCTCTTATTCCCTACCACAAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: EKVPVDNGSCLN*CLTSYSLPQGS Trigger: GCTACCTTGTGGTAGGGAATAAGAGGTCAGACACAAATTAAGACAACTCCCATTATCAACAGGAACTTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| CDS-3UTR TCA 90 bp | ATTAAGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCTACCCACATATTGGATaGAATGCTCCAGTTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: IKFKRYSVDEGTYSPQALYPHIG*NAPVPH Trigger: GTGTGGAACTGGAGCATTTCATCCAATATGTGGGTA...GAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | ATTAAGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCGAGCCAGTAGTGCTCTaGAATGTCAGTTCTGATGTA | + |
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Preference number: 4 (lower is better) Translates to: IKFKRYSVDEGTYSPQALEPVVL*NVSSDV Trigger: TACATCAGAACTGACATTTCAGAGCACTACTGGCTC...GAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | ATTAAGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCGAGGTACTGCCTTCTTaGGATGATTCACGAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: IKFKRYSVDEGTYSPQALEVLPS*DDSRKK Trigger: CTTCTTTCGTGAATCATCTCAAGAAGGCAGTACCTC...GAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAAAAGATATTCTGTGGATaGAGGCACTTATTCGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQKIFCG*RHLFAS Trigger: TGAGGCGAATAAGTGCCTTCATCCACAGAATATCTT...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR GCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAAAAGGGATCGAGTGAATaGAGTATCTTTGCCAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQKGSSE*SIFAKE Trigger: TTCCTTGGCAAAGATACTGCATTCACTCGATCCCTT...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CCA 90 bp | ATTAAGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCCAACTCGAGAAAGGATaGTTTTATCGGAGGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: IKFKRYSVDEGTYSPQALQLEKG*FYRRYC Trigger: GCAGTACCTCCGATAAAACCATCCTTTCTCGAGTTG...GAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | ATTAAGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCAAAGCAGGAAAAAGGTaGAAATCTTGGCTTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: IKFKRYSVDEGTYSPQALKAGKR*KSWLLA Trigger: AGCCAGAAGCCAAGATTTTCACCTTTTTCCTGCTTT...GAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAATTAAGTCAACCAGACTaGGTAGAAAGATGTGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQLSQPD*VERCGL Trigger: AAGACCACATCTTTCTACTCAGTCTGGTTGACTTAA...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR GCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAAGAAACAACATGGTCATaGTTAGCATCATCAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQETTWS*LASSKQ Trigger: CTGCTTTGATGATGCTAAGCATGACCATGTTGTTTC...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR GCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAAAAGGACATTTCAGTCTaGCAGACTCCAAATTATGTG | + |
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Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQKDISV*QTPNYV Trigger: CACATAATTTGGAGTCTGGCAGACTGAAATGTCCTT...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAACTGGAAGAAACAACATaGTCATGCTTAGCATCATCA | + |
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Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQLEETT*SCLASS Trigger: TGATGATGCTAAGCATGACCATGTTGTTTCTTCCAG...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CCA 90 bp | ATTAAGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCCAAAGTGCCAGTGACTaGAAGAAACAACATGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IKFKRYSVDEGTYSPQALQSASD*KKQHGH Trigger: ATGACCATGTTGTTTCTTCCAGTCACTGGCACTTTG...GAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAACTTTGTAGGTTAGCTTaGGTCTTGGAATATTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQLCRLA*VLEYFA Trigger: AGCAAAATATTCCAAGACTCAAGCTAACCTACAAAG...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR TCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAATCTAAGAGAAGAGTTTaGAAATCCAGTCCTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQSKRRV*KSSPSD Trigger: ATCAGAAGGACTGGATTTTCAAACTCTTCTCTTAGA...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR GCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAAAGTCTTGGAATATTTTaGTTCAAAGTGCCAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQSLGIF*FKVPVT Trigger: AGTCACTGGCACTTTGAAGCAAAATATTCCAAGACT...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAATTGCACATTCTGTATTaGCATCTTTCCCAGCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQLHILY*HLSQLI Trigger: AATTAGCTGGGAAAGATGCCAATACAGAATGTGCAA...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CCA 90 bp | AGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGAATATACCCACATATTaGATGAAATGCTCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLKDILWMKALIRLRLSLNIPTY*MKCSSS Trigger: GGAACTGGAGCATTTCATCCAATATGTGGGTATATT...CAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CCA 90 bp | AGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGTGGATTGTAGGTGTCTaGTATGAAGAAAGTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLKDILWMKALIRLRLSLWIVGV*YEESSN Trigger: ATTGGAACTTTCTTCATACCAGACACCTACAATCCA...CAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CCA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAATTAAAAGATATTCTGTaGATGAAGGCACTTATTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KRYSVDEGTYSPQALIDQLKDIL*MKALIR Trigger: GCGAATAAGTGCCTTCATCCACAGAATATCTTTTAA...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| 3UTR CAA 72 bp | GGAATAAAGCACCTTATACACTATCAAATTCGGGGCTaGCTTAGCTCAACTATTTACATGACAATAAATTCC | + |
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Preference number: 4 (lower is better) Translates to: GIKHLIHYQIRG*LSSTIYMTINS Trigger: GGAATTTATTGTCATGTAAATAGTTGAGCTAAGCAAGCCCCGAATTTGATAGTGTATAAGGTGCTTTATTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| 3UTR CAA 72 bp | AATTGCTTTGAGCTCGCTATGAGTTCCTGGAATATTTaGTCCAAGCAAATCTATAATTACAAACACTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NCFELAMSSWNI*SKQIYNYKHCC Trigger: ACAACAGTGTTTGTAATTATAGATTTGCTTGGACAAAATATTCCAGGAACTCATAGCGAGCTCAAAGCAATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000284136.10 |
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| CDS TCA 90 bp | GAGGTCCAGCGGCGCGGCAACCCGGGGCACCGGCGCGCGTTCCTCTaGGCCGCAGCCCTGGCTGAGCAAGCGGAGCCGCCGGCAGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EVQRRGNPGHRRAFL*AAALAEQAEPPAAL Trigger: CAGGGCTGCCGGCGGCTCCGCTTGCTCAGCCAGGGCTGCGGCTCAGAGGAACGCGCGCCGGTGCCCCGGGTTGCCGCGCCGCTGGACCTC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000444867.1 |
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| CDS CCA 90 bp | GCGGCAACCCGGGGCACCGGCGCGCGTTCCTCTGAGCCGCAGCCCTaGCTGAGCAAGCGGAGCCGCCGGCAGCCCTGGCAGAGCCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AATRGTGARSSEPQP*LSKRSRRQPWQSRE Trigger: TTCCCGGCTCTGCCAGGGCTGCCGGCGGCTCCGCTTGCTCAGCCAGGGCTGCGGCTCAGAGGAACGCGCGCCGGTGCCCCGGGTTGCCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000444867.1 |
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| CDS TCA 90 bp | CAACCCGGGGCACCGGCGCGCGTTCCTCTGAGCCGCAGCCCTGGCTaGGCAAGCGGAGCCGCCGGCAGCCCTGGCAGAGCCGGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QPGAPARVPLSRSPG*ASGAAGSPGRAGKL Trigger: CAGCTTCCCGGCTCTGCCAGGGCTGCCGGCGGCTCCGCTTGCTCAGCCAGGGCTGCGGCTCAGAGGAACGCGCGCCGGTGCCCCGGGTTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284136.11 |
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| CDS CCA 90 bp | TCCCCCGAGAGCCGCGCTAGGACAGGCGGAGAGCAAGGCACCAGCTaGAGCTTTGGGGAGGAGAGGGTGGCGAGGAAAGGCACGCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SPESRARTGGEQGTS*SFGEERVARKGTLQ Trigger: TTGGAGCGTGCCTTTCCTCGCCACCCTCTCCTCCCCAAAGCTCCAGCTGGTGCCTTGCTCTCCGCCTGTCCTAGCGCGGCTCTCGGGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000284136.11 |
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| CDS CCA 90 bp | ACAGTGTTCACCAAATCTCCTGTACTTGCCAGCAGAGGGCACCCGTaGAATAAGGAATCCAAGATTTTCCTACCTATAGAAGGTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVFTKSPVLASRGHP*NKESKIFLPIEGGS Trigger: GGAGCCACCTTCTATAGGTAGGAAAATCTTGGATTCCTTATTCCACGGGTGCCCTCTGCTGGCAAGTACAGGAGATTTGGTGAACACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463315.1 |
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| CDS GCA 90 bp | TCTGATGTAGTGGTGGTCATGAGTAGGCCCAAGGGATCGAGTGAATaGAGTATCTTTGCCAAGGAAATCAGAAGCTGTTCCAGAGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SDVVVVMSRPKGSSE*SIFAKEIRSCSRVE Trigger: CTCTACTCTGGAACAGCTTCTGATTTCCTTGGCAAAGATACTGCATTCACTCGATCCCTTGGGCCTACTCATGACCACCACTACATCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000444867.1 |
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| CDS TCA 90 bp | GAAAACTACGTGGCTACAGCTCTAGGGAGCTCATCCAGGTCTCTGTaGTGTCTTCGATTTCGTTTCTTCTTCATTTCCTGCATGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ENYVATALGSSSRSL*CLRFRFFFISCMCF Trigger: GAAGCACATGCAGGAAATGAAGAAGAAACGAAATCGAAGACATCACAGAGACCTGGATGAGCTCCCTAGAGCTGTAGCCACGTAGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS GCA 90 bp | GTTGGTCCTCCTGCAACTGGGTATACGGACTTATACATCACAGAGTaGCGCTTTATGAAACTGATGACATCATCTGGAAAATCTCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGPPATGYTDLYITE*RFMKLMTSSGKSRV Trigger: CACCCGAGATTTTCCAGATGATGTCATCAGTTTCATAAAGCGGCACTCTGTGATGTATAAGTCCGTATACCCAGTTGCAGGAGGACCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS CCA 90 bp | GAAACTGATGACATCATCTGGAAAATCTCGGGTGGACTTAATCAGTaGGTCATAGGTTTTGCTTGGACATGTACCAGGCCGTGGATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ETDDIIWKISGGLNQ*VIGFAWTCTRPWIR Trigger: CCTTATCCACGGCCTGGTACATGTCCAAGCAAAACCTATGACCCACTGATTAAGTCCACCCGAGATTTTCCAGATGATGTCATCAGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS TCA 90 bp | TCACTTACTTTGAGGACTCTTACAAAGAGAAGAGTTACTGCATTATaGCGTGTGCCCAGACCTAGAGCACTTCCGTGTACTTTGCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLTLRTLTKRRVTAL*RVPRPRALPCTLRV Trigger: CACACGCAAAGTACACGGAAGTGCTCTAGGTCTGGGCACACGTCATAATGCAGTAACTCTTCTCTTTGTAAGAGTCCTCAAAGTAAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463315.1 |
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| CDS CCA 90 bp | AGTTTCATGACTAATGCTGTCTTCGATGTCCCAGCACTGGGTGATTaGGTCGCCATATTTTACATCTTGGCGTCTAGCTCTCCTTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFMTNAVFDVPALGD*VAIFYILASSSPFR Trigger: TCTAAAAGGAGAGCTAGACGCCAAGATGTAAAATATGGCGACCCAATCACCCAGTGCTGGGACATCGAAGACAGCATTAGTCATGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS-3UTR CAA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAAAGAAAGATGTGGTCTTaGGCTCCCAAGAGCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KRYSVDEGTYSPQALIDQRKMWS*APKSSL Trigger: CAGGCTGCTCTTGGGAGCCAAAGACCACATCTTTCT...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS TCA 90 bp | ATTCTCCCATCATACTGCACCCAACGATGGTCTGCACTTTCCTTATaGGCATATGGACCATTAAAAACTGCTCTGATGTCAGCCATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: ILPSYCTQRWSALSL*AYGPLKTALMSAML Trigger: TAGCATGGCTGACATCAGAGCAGTTTTTAATGGTCCATATGCTCATAAGGAAAGTGCAGACCATCGTTGGGTGCAGTATGATGGGAGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS TCA 90 bp | CTGCAACTCCTCCAGCACTACCTCTTCCATATTCCACTTTTCCTTTaGAATGCTGACAACTTTGAGGACAGTTCCAATGTCTGTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: LQLLQHYLFHIPLFL*NADNFEDSSNVCSK Trigger: CTTGGAACAGACATTGGAACTGTCCTCAAAGTTGTCAGCATTTCAAAGGAAAAGTGGAATATGGAAGAGGTAGTGCTGGAGGAGTTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS TCA 90 bp | TATGACGTGTGCCCAGACCTAGAGCACTTCCGTGTACTTTGCGTGTaGATTTTAGTAAGAACCACTCCTGTAAGGTTTGCTCAGGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: YDVCPDLEHFRVLCV*ILVRTTPVRFAQVK Trigger: TTTTACCTGAGCAAACCTTACAGGAGTGGTTCTTACTAAAATTCACACGCAAAGTACACGGAAGTGCTCTAGGTCTGGGCACACGTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463315.1 |
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| CDS CCA 90 bp | CACTATCTGTGTCAGTCTGTAATCCACATTGATTCTCTTGAACGTTaGTCCTCCTGCAACTGGGTATACGGACTTATACATCACAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HYLCQSVIHIDSLER*SSCNWVYGLIHHRV Trigger: CACTCTGTGATGTATAAGTCCGTATACCCAGTTGCAGGAGGACCAACGTTCAAGAGAATCAATGTGGATTACAGACTGACACAGATAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS GCA 90 bp | TCCAATGTCTGTTCCAAGAAACATTACATCGTACTGGCCATCTTCTaGAATGACATGATCCACCACTATCTGTGTCAGTCTGTAATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SNVCSKKHYIVLAIF*NDMIHHYLCQSVIH Trigger: GTGGATTACAGACTGACACAGATAGTGGTGGATCATGTCATTGCAGAAGATGGCCAGTACGATGTAATGTTTCTTGGAACAGACATTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS CCA 90 bp | CTTTCATCGGGCTTCAACTCCTCTCGATGCTCATCCCCTGACCTCTaGATATACCATTTAATAGTTGCTTGTTGGGATTTAGGTATACAT | + |
|
Preference number: 5 (lower is better) Translates to: LSSGFNSSRCSSPDL*IYHLIVACWDLGIH Trigger: ATGTATACCTAAATCCCAACAAGCAACTATTAAATGGTATATCCAGAGGTCAGGGGATGAGCATCGAGAGGAGTTGAAGCCCGATGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS-3UTR CAA 90 bp | AGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATTCCACCCGTTCCTTaGCAGCAGGCCAATAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLKDILWMKALIRLRLSLIPPVP*QQANKS Trigger: AGATTTATTGGCCTGCTGCAAAGGAACGGGTGGAAT...CAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS TCA 90 bp | ACGAAGCTCATCAAAGTAAGTATCTGCCCCATCACTTCCAGGAATTaGGCAAATCAGTCTGGCCTTAAGAAAAGTCGTCCACTTGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: TKLIKVSICPITSRN*ANQSGLKKSRPLVY Trigger: ATAAACAAGTGGACGACTTTTCTTAAGGCCAGACTGATTTGCTCAATTCCTGGAAGTGATGGGGCAGATACTTACTTTGATGAGCTTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463315.1 |
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| CDS TCA 90 bp | GGAATCCAAGATTTTCCTACCTATAGAAGGTGGCTCCTTTCAAAATaGAAGACTGCATGGAGAATGGATGAACTGTGTAGTTCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GIQDFPTYRRWLLSK*KTAWRMDELCSSRA Trigger: AGCTCTGGAACTACACAGTTCATCCATTCTCCATGCAGTCTTTCATTTTGAAAGGAGCCACCTTCTATAGGTAGGAAAATCTTGGATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463315.1 |
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| CDS CCA 90 bp | GTCCTCCTACATCATTCTTACAAACTCTTCCAACTCGAGAAAGGATaGTTTTATCGGAGGTACTGCCTTCTTGAGATGATTCACGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VLLHHSYKLFQLEKG*FYRRYCLLEMIHER Trigger: TCTTTCGTGAATCATCTCAAGAAGGCAGTACCTCCGATAAAACCATCCTTTCTCGAGTTGGAAGAGTTTGTAAGAATGATGTAGGAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284136.11 |
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| CDS CCA 90 bp | CTTATACATCACAGAGTGCCGCTTTATGAAACTGATGACATCATCTaGAAAATCTCGGGTGGACTTAATCAGTGGGTCATAGGTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LIHHRVPLYETDDII*KISGGLNQWVIGFA Trigger: AGCAAAACCTATGACCCACTGATTAAGTCCACCCGAGATTTTCCAGATGATGTCATCAGTTTCATAAAGCGGCACTCTGTGATGTATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS TCA 90 bp | TTGAAGCTCATCAAAGTAAGTATCTGCCCCATCACTTCCAGGAATTaGGCAAATCAGTCTGGCCTTAAGAAAAGTCGTCCACTTGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LKLIKVSICPITSRN*ANQSGLKKSRPLVY Trigger: ATAAACAAGTGGACGACTTTTCTTAAGGCCAGACTGATTTGCTCAATTCCTGGAAGTGATGGGGCAGATACTTACTTTGATGAGCTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000284136.11 |
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| CDS CCA 90 bp | CAAAGCACAAATTCTCCTTACAAACTCTTCCAACTCGAGAAAGGATaGTTTTATCGGAGGTACTGCCTTCTTGAGATGATTCACGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSTNSPYKLFQLEKG*FYRRYCLLEMIHER Trigger: TCTTTCGTGAATCATCTCAAGAAGGCAGTACCTCCGATAAAACCATCCTTTCTCGAGTTGGAAGAGTTTGTAAGGAGAATTTGTGCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CAA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAAGAGTCTTGGAATATTTaGCTTCAAAGTGCCAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KRYSVDEGTYSPQALIDQESWNI*LQSASD Trigger: GTCACTGGCACTTTGAAGCAAAATATTCCAAGACTC...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CAA 90 bp | AGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGAGGGAATACAGCTATTaGAAAGCAGCAAGTCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLKDILWMKALIRLRLSLREYSY*KAASLC Trigger: ACAAAGACTTGCTGCTTTCAAATAGCTGTATTCCCT...CAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CAA 90 bp | AGTTTAAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGTTTGCACATTCTGTATaGGCATCTTTCCCAGCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLKDILWMKALIRLRLSLFAHSV*ASFPAN Trigger: ATTAGCTGGGAAAGATGCCAATACAGAATGTGCAAA...CAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTTAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS-3UTR CAA 90 bp | AAAAGATATTCTGTGGATGAAGGCACTTATTCGCCTCAGGCTCTCATTGATCAACAATATACCCACATATaGGATGAAATGCTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KRYSVDEGTYSPQALIDQQYTHI*DEMLQF Trigger: GAACTGGAGCATTTCATCCAATATGTGGGTATATTG...TTGATCAATGAGAGCCTGAGGCGAATAAGTGCCTTCATCCACAGAATATCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS CCA 90 bp | TGCTCATCCCCTGACCTCTGGATATACCATTTAATAGTTGCTTGTTaGGATTTAGGTATACATTCCAGAAAGGTTGAGTTAAATTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: CSSPDLWIYHLIVAC*DLGIHSRKVELNSM Trigger: CATTGAATTTAACTCAACCTTTCTGGAATGTATACCTAAATCCCAACAAGCAACTATTAAATGGTATATCCAGAGGTCAGGGGATGAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS CCA 72 bp | CAGCCCTGGCTGAGCAAGCGGAGCCGCCGGCAGCCCTaGCAGAGCCGGGAAGCTGCGGCCGCAGGGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QPWLSKRSRRQP*QSREAAAAGAR Trigger: CCTGGCCCCTGCGGCCGCAGCTTCCCGGCTCTGCCAGGGCTGCCGGCGGCTCCGCTTGCTCAGCCAGGGCTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284136.11 |
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| CDS CCA 72 bp | CGGGGCACCGGCGCGCGTTCCTCTGAGCCGCAGCCCTaGCTGAGCAAGCGGAGCCGCCGGCAGCCCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGTGARSSEPQP*LSKRSRRQPWQ Trigger: CTGCCAGGGCTGCCGGCGGCTCCGCTTGCTCAGCCAGGGCTGCGGCTCAGAGGAACGCGCGCCGGTGCCCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000444867.1 |
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| CDS TCA 72 bp | GCACCGGCGCGCGTTCCTCTGAGCCGCAGCCCTGGCTaGGCAAGCGGAGCCGCCGGCAGCCCTGGCAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: APARVPLSRSPG*ASGAAGSPGRA Trigger: GGCTCTGCCAGGGCTGCCGGCGGCTCCGCTTGCTCAGCCAGGGCTGCGGCTCAGAGGAACGCGCGCCGGTGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000444867.1 |
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| CDS CCA 72 bp | GGCACGCTCCAAACAGGAGGGCGGCTTTTAAGTTTGTaGTGTGACCGCAGCAGCTGTCCTGGGAGAGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: GTLQTGGRLLSL*CDRSSCPGRDS Trigger: TGAGTCTCTCCCAGGACAGCTGCTGCGGTCACACCACAAACTTAAAAGCCGCCCTCCTGTTTGGAGCGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284136.11 |
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| CDS TCA 72 bp | GCTCCAAACAGGAGGGCGGCTTTTAAGTTTGTGGTGTaGCCGCAGCAGCTGTCCTGGGAGAGACTCAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: APNRRAAFKFVV*PQQLSWERLSL Trigger: AAGACTGAGTCTCTCCCAGGACAGCTGCTGCGGTCACACCACAAACTTAAAAGCCGCCCTCCTGTTTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000284136.11 |
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| CDS CCA 72 bp | CTCCGCTTCTCCCTGTGCCACATCTGTTCGCAGTACTaGTCGAGGCTGAAGTTTGGGCTGCTAAGGATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRFSLCHICSQY*SRLKFGLLRIW Trigger: CCAAATCCTTAGCAGCCCAAACTTCAGCCTCGACCAGTACTGCGAACAGATGTGGCACAGGGAGAAGCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS CAA 72 bp | AAGTCGGAGGGACAGTGTTCACCAAATCTCCTGTACTaGCCAGCAGAGGGCACCCGTGGAATAAGGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: KSEGQCSPNLLY*PAEGTRGIRNP Trigger: TGGATTCCTTATTCCACGGGTGCCCTCTGCTGGCAAGTACAGGAGATTTGGTGAACACTGTCCCTCCGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463315.1 |
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| CDS GCA 72 bp | GTGGTGGTCATGAGTAGGCCCAAGGGATCGAGTGAATaGAGTATCTTTGCCAAGGAAATCAGAAGCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: VVVMSRPKGSSE*SIFAKEIRSCS Trigger: GGAACAGCTTCTGATTTCCTTGGCAAAGATACTGCATTCACTCGATCCCTTGGGCCTACTCATGACCACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000444867.1 |
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| CDS CCA 72 bp | TGGGTCATAGGTTTTGCTTGGACATGTACCAGGCCGTaGATAAGGAATTCTCCCATCATACTGCACCCAACG | + |
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Preference number: 6 (lower is better) Translates to: WVIGFAWTCTRP*IRNSPIILHPT Trigger: CGTTGGGTGCAGTATGATGGGAGAATTCCTTATCCACGGCCTGGTACATGTCCAAGCAAAACCTATGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS CCA 72 bp | ACTAATGCTGTCTTCGATGTCCCAGCACTGGGTGATTaGGTCGCCATATTTTACATCTTGGCGTCTAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: TNAVFDVPALGD*VAIFYILASSS Trigger: AGAGCTAGACGCCAAGATGTAAAATATGGCGACCCAATCACCCAGTGCTGGGACATCGAAGACAGCATTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS CAA 90 bp | TTCATTAACAAGTCGGAGGGACAGTGTTCACCAAATCTCCTGTACTaGCCAGCAGAGGGCACCCGTGGAATAAGGAATCCAAGATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: FINKSEGQCSPNLLY*PAEGTRGIRNPRFS Trigger: GGAAAATCTTGGATTCCTTATTCCACGGGTGCCCTCTGCTGGCAAGTACAGGAGATTTGGTGAACACTGTCCCTCCGACTTGTTAATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463315.1 |
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| CDS TCA 72 bp | AGGTACTCATCTGTCATTACTGAAGCAAAAGGCTGCTaGGGATCGAAAGGACATTTCAGTCTGCCAGACTCC | + |
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Preference number: 6 (lower is better) Translates to: RYSSVITEAKGC*GSKGHFSLPDS Trigger: GGAGTCTGGCAGACTGAAATGTCCTTTCGATCCTCAGCAGCCTTTTGCTTCAGTAATGACAGATGAGTACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000444867.1 |
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| CDS GCA 72 bp | CTCTTACAAAGAGAAGAGTTACTGCATTATGACGTGTaGCCAGACCTAGAGCACTTCCGTGTACTTTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: LLQREELLHYDV*PDLEHFRVLCV Trigger: CACGCAAAGTACACGGAAGTGCTCTAGGTCTGGGCACACGTCATAATGCAGTAACTCTTCTCTTTGTAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463315.1 |
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| CDS CCA 72 bp | CCACATCTGTTCGCAGTACTGGTCGAGGCTGAAGTTTaGGCTGCTAAGGATTTGGATGTAGTCTTTGTATCT | + |
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Preference number: 6 (lower is better) Translates to: PHLFAVLVEAEV*AAKDLDVVFVS Trigger: AGATACAAAGACTACATCCAAATCCTTAGCAGCCCAAACTTCAGCCTCGACCAGTACTGCGAACAGATGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS CAA 72 bp | CCAGCACTGGGTGATTGGGTCGCCATATTTTACATCTaGGCGTCTAGCTCTCCTTTTAGAAGTAGGAGCATA | + |
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Preference number: 6 (lower is better) Translates to: PALGDWVAIFYI*ASSSPFRSRSI Trigger: TATGCTCCTACTTCTAAAAGGAGAGCTAGACGCCAAGATGTAAAATATGGCGACCCAATCACCCAGTGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS TCA 72 bp | TTCATCGGGCTTCAACTCCTCTCGATGCTCATCCCCTaGCCTCTGGATATACCATTTAATAGTTGCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: FIGLQLLSMLIP*PLDIPFNSCLL Trigger: CAACAAGCAACTATTAAATGGTATATCCAGAGGTCAGGGGATGAGCATCGAGAGGAGTTGAAGCCCGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS TCA 72 bp | TGCCCAGACCTAGAGCACTTCCGTGTACTTTGCGTGTaGATTTTAGTAAGAACCACTCCTGTAAGGTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: CPDLEHFRVLCV*ILVRTTPVRFA Trigger: AGCAAACCTTACAGGAGTGGTTCTTACTAAAATTCACACGCAAAGTACACGGAAGTGCTCTAGGTCTGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463315.1 |
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| CDS TCA 72 bp | TTGAGGACTCTTACAAAGAGAAGAGTTACTGCATTATaGCGTGTGCCCAGACCTAGAGCACTTCCGTGTACT | + |
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Preference number: 6 (lower is better) Translates to: LRTLTKRRVTAL*RVPRPRALPCT Trigger: AGTACACGGAAGTGCTCTAGGTCTGGGCACACGTCATAATGCAGTAACTCTTCTCTTTGTAAGAGTCCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463315.1 |
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| CDS CAA 90 bp | GAATCCTTCTTCTGCAAACTTCGAATCAGTAGCCCATATTCCGTTTaGATGATTCTTTCATCGGGCTTCAACTCCTCTCGATGCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: ESFFCKLRISSPYSV*MILSSGFNSSRCSS Trigger: GGATGAGCATCGAGAGGAGTTGAAGCCCGATGAAAGAATCATCAAAACGGAATATGGGCTACTGATTCGAAGTTTGCAGAAGAAGGATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS GCA 72 bp | GTAGAAAGATGTGGTCTTTGGCTCCCAAGAGCAGCCTaGCTCTTTCCTCATCTAAGAGAAGAGTTTGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: VERCGLWLPRAA*LFPHLREEFEN Trigger: ATTTTCAAACTCTTCTCTTAGATGAGGAAAGAGGCAGGCTGCTCTTGGGAGCCAAAGACCACATCTTTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000444867.1 |
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| CDS CCA 72 bp | GGCTTCAACTCCTCTCGATGCTCATCCCCTGACCTCTaGATATACCATTTAATAGTTGCTTGTTGGGATTTA | + |
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Preference number: 6 (lower is better) Translates to: GFNSSRCSSPDL*IYHLIVACWDL Trigger: TAAATCCCAACAAGCAACTATTAAATGGTATATCCAGAGGTCAGGGGATGAGCATCGAGAGGAGTTGAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS TCA 72 bp | ATCAAAGTAAGTATCTGCCCCATCACTTCCAGGAATTaGGCAAATCAGTCTGGCCTTAAGAAAAGTCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: IKVSICPITSRN*ANQSGLKKSRP Trigger: TGGACGACTTTTCTTAAGGCCAGACTGATTTGCTCAATTCCTGGAAGTGATGGGGCAGATACTTACTTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000463315.1 |
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| CDS TCA 72 bp | TCATACTGCACCCAACGATGGTCTGCACTTTCCTTATaGGCATATGGACCATTAAAAACTGCTCTGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: SYCTQRWSALSL*AYGPLKTALMS Trigger: TGACATCAGAGCAGTTTTTAATGGTCCATATGCTCATAAGGAAAGTGCAGACCATCGTTGGGTGCAGTATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS GCA 72 bp | AGGAATTCTCCCATCATACTGCACCCAACGATGGTCTaGACTTTCCTTATGAGCATATGGACCATTAAAAAC | + |
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Preference number: 6 (lower is better) Translates to: RNSPIILHPTMV*TFLMSIWTIKN Trigger: GTTTTTAATGGTCCATATGCTCATAAGGAAAGTGCAGACCATCGTTGGGTGCAGTATGATGGGAGAATTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS GCA 72 bp | CCTGCAACTGGGTATACGGACTTATACATCACAGAGTaGCGCTTTATGAAACTGATGACATCATCTGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: PATGYTDLYITE*RFMKLMTSSGK Trigger: TTTTCCAGATGATGTCATCAGTTTCATAAAGCGGCACTCTGTGATGTATAAGTCCGTATACCCAGTTGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS GCA 72 bp | TGTTCCAAGAAACATTACATCGTACTGGCCATCTTCTaGAATGACATGATCCACCACTATCTGTGTCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: CSKKHYIVLAIF*NDMIHHYLCQS Trigger: AGACTGACACAGATAGTGGTGGATCATGTCATTGCAGAAGATGGCCAGTACGATGTAATGTTTCTTGGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS CCA 72 bp | TGTCAGTCTGTAATCCACATTGATTCTCTTGAACGTTaGTCCTCCTGCAACTGGGTATACGGACTTATACAT | + |
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Preference number: 6 (lower is better) Translates to: CQSVIHIDSLER*SSCNWVYGLIH Trigger: ATGTATAAGTCCGTATACCCAGTTGCAGGAGGACCAACGTTCAAGAGAATCAATGTGGATTACAGACTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS CAA 72 bp | TTCTGCAAACTTCGAATCAGTAGCCCATATTCCGTTTaGATGATTCTTTCATCGGGCTTCAACTCCTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: FCKLRISSPYSV*MILSSGFNSSR Trigger: TCGAGAGGAGTTGAAGCCCGATGAAAGAATCATCAAAACGGAATATGGGCTACTGATTCGAAGTTTGCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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| CDS TCA 72 bp | TCCAATAAATTTTGCTCCATTGAGCCAGTAGTGCTCTaGAATGTCAGTTCTGATGTAGTGGTGGTCATGAGT | + |
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Preference number: 6 (lower is better) Translates to: SNKFCSIEPVVL*NVSSDVVVVMS Trigger: ACTCATGACCACCACTACATCAGAACTGACATTTCAGAGCACTACTGGCTCAATGGAGCAAAATTTATTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000444867.1 |
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| CDS CCA 72 bp | AATTCTCCTTACAAACTCTTCCAACTCGAGAAAGGATaGTTTTATCGGAGGTACTGCCTTCTTGAGATGATT | + |
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Preference number: 6 (lower is better) Translates to: NSPYKLFQLEKG*FYRRYCLLEMI Trigger: AATCATCTCAAGAAGGCAGTACCTCCGATAAAACCATCCTTTCTCGAGTTGGAAGAGTTTGTAAGGAGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444867.1 |
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| CDS TCA 72 bp | ATGGTCATGCTTAGCATCATCAAAGCAGGAAAAAGGTaGAAATCTTGGCTTCTGGCTTTAAGTCTTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: MVMLSIIKAGKR*KSWLLALSLSS Trigger: AGATGAAAGACTTAAAGCCAGAAGCCAAGATTTTCACCTTTTTCCTGCTTTGATGATGCTAAGCATGACCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000444867.1 |
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| CDS GCA 72 bp | CGTGTGAATTTTAGTAAGAACCACTCCTGTAAGGTTTaGTCAGGTAAAATTAATCAGGCATTTGGAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: RVNFSKNHSCKV*SGKINQAFGAK Trigger: TTTGGCTCCAAATGCCTGATTAATTTTACCTGAGCAAACCTTACAGGAGTGGTTCTTACTAAAATTCACACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463315.1 |
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| CDS CAA 72 bp | CTGTGTCTTGCTGTAGTTTTGTTTCCTTCACTTACTTaGAGGACTCTTACAAAGAGAAGAGTTACTGCATTA | + |
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Preference number: 6 (lower is better) Translates to: LCLAVVLFPSLT*RTLTKRRVTAL Trigger: TAATGCAGTAACTCTTCTCTTTGTAAGAGTCCTCAAAGTAAGTGAAGGAAACAAAACTACAGCAAGACACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463315.1 |
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| CDS TCA 72 bp | CGAGAAAGGATGGTTTTATCGGAGGTACTGCCTTCTTaGGATGATTCACGAAAGAAGAAATATATTTTATCA | + |
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Preference number: 6 (lower is better) Translates to: RERMVLSEVLPS*DDSRKKKYILS Trigger: TGATAAAATATATTTCTTCTTTCGTGAATCATCTCAAGAAGGCAGTACCTCCGATAAAACCATCCTTTCTCG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000444867.1 |
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| CDS TCA 72 bp | TGCTTGTTGGGATTTAGGTATACATTCCAGAAAGGTTaGGTTAAATTCAATGCCAAAAATCACCTTTTCATC | + |
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Preference number: 6 (lower is better) Translates to: CLLGFRYTFQKG*VKFNAKNHLFI Trigger: GATGAAAAGGTGATTTTTGGCATTGAATTTAACTCAACCTTTCTGGAATGTATACCTAAATCCCAACAAGCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000284136.11 ENST00000484038.1 |
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