RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEMA3B (Homo sapiens)

Ensembl gene IDs: ENSG00000012171

Ensembl transcript IDs: ENST00000416295.1, ENST00000418576.3, ENST00000419007.5, ENST00000433753.4, ENST00000434030.1, ENST00000439487.5, ENST00000441915.5, ENST00000456210.5, ENST00000456560.6, ENST00000611067.4, ENST00000612509.4, ENST00000616701.5, ENST00000618865.4, ENST00000619119.4, ENST00000621029.4

Found 767 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTaGATCCTGCGCCCGACCTGTGCCGCCCTCCCGGGGCTGCTACAT +
Preference number: 1 (lower is better)
Translates to: WSLLWSSASPSLPSG*ILRPTCAALPGLLH
Trigger: ATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR GCA 90 bp TGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTaGGCCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGG +
Preference number: 1 (lower is better)
Translates to: CSGARLPRPFPPAES*ARPVPPSRGCYIQG
Trigger: CCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR CCA 90 bp CACCGCGCCTGGCCGGAACCACCTTTAATCCTCACCAGGCAACCTTaGACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTGCCCA +
Preference number: 1 (lower is better)
Translates to: HRAWPEPPLILTRQP*TGETRALTPLVRCP
Trigger: TGGGCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGTCCAAGGTTGCCTGGTGAGGATTAAAGGTGGTTCCGGCCAGGCGCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
3UTR TCA 90 bp TACAGACGGGGTTTCACCGTGTTAGCCGGGATGGTTTCCATCTCCTaGCCTCGTGATCCGTCCGCCTGGGCCTCCGAAAGTGTTGGGATT +
Preference number: 1 (lower is better)
Translates to: YRRGFTVLAGMVSIS*PRDPSAWASESVGI
Trigger: AATCCCAACACTTTCGGAGGCCCAGGCGGACGGATCACGAGGTCAGGAGATGGAAACCATCCCGGCTAACACGGTGAAACCCCGTCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616701.5
3UTR GCA 90 bp CAACCTTGGACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTaGCCAAGACCACATAGCAAGGCCGAGGACTGGGGTTTTCTGCTG +
Preference number: 1 (lower is better)
Translates to: QPWTGETRALTPLVR*PRPHSKAEDWGFLL
Trigger: CAGCAGAAAACCCCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGTCCAAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616701.5
3UTR CCA 90 bp ACACCGCTAGTAAGGTGCCCAAGACCACATAGCAAGGCCGAGGACTaGGGTTTTCTGCTGGGGCCATTCCAGCTTTGGCTGATAATGCGT +
Preference number: 1 (lower is better)
Translates to: TPLVRCPRPHSKAED*GFLLGPFQLWLIMR
Trigger: ACGCATTATCAGCCAAAGCTGGAATGGCCCCAGCAGAAAACCCCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616701.5
3UTR-3UTR GCA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCTCGCCTGTCGTCTCCTaGTTGGTTCCCGGCGTGGGG +
Preference number: 2 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRSPVVS*LVPGVG
Trigger: CCCCACGCCGGGAACCAAGCAGGAGACGACAGGCGA...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR GCA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTATAAGCCCGCGCAGCTaGCCTCAGCCAGGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: GWALQAPPRPWSLLWSSAISPRS*PQPGPV
Trigger: GACAGGCCCTGGCTGAGGGCAGCTGCGCGGGCTTAT...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR CCA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTCCAGGGCCTGTCGGTTaGTGTCTCCATCGGCCGGTG +
Preference number: 2 (lower is better)
Translates to: GWALQAPPRPWSLLWSSAPGPVG*CLHRPV
Trigger: CACCGGCCGATGGAGACACCAACCGACAGGCCCTGG...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR TCA 90 bp GGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTTCCCTTCCCTCCGGCTaGATCCTGCGCCCGACCTGT +
Preference number: 2 (lower is better)
Translates to: GGHSRHLLGPGRCSGARLSLPSG*ILRPTC
Trigger: ACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGA...AAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR GCA 90 bp GGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTATAAGCCCGCGCAGCTaGCCTCAGCCAGGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: GGHSRHLLGPGRCSGARLISPRS*PQPGPV
Trigger: GACAGGCCCTGGCTGAGGGCAGCTGCGCGGGCTTAT...AAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR GCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCCGCCCTCCCGGGGCTaGTACATTCAAGGGTTATCC +
Preference number: 2 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSPPSRG*YIQGLS
Trigger: GGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGG...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR CCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCTGTCGTCTCCTGCTTaGTTCCCGGCGTGGGGACAG +
Preference number: 2 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPLSSPA*FPAWGQ
Trigger: CTGTCCCCACGCCGGGAACCAAGCAGGAGACGACAG...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR CCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCCTGTCGTCTCCTGCTTaGTTCCCGGCGTGGGGACAG +
Preference number: 2 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPLSSPA*FPAWGQ
Trigger: CTGTCCCCACGCCGGGAACCAAGCAGGAGACGACAG...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR CCA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCCTGTCGTCTCCTGCTTaGTTCCCGGCGTGGGGACAG +
Preference number: 2 (lower is better)
Translates to: VALELGFPVPSLRLNPAPLSSPA*FPAWGQ
Trigger: CTGTCCCCACGCCGGGAACCAAGCAGGAGACGACAG...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR TCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTTCCCTTCCCTCCGGCTaGATCCTGCGCCCGACCTGT +
Preference number: 2 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTASLPSG*ILRPTC
Trigger: ACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGA...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR GCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCGCCTGTCGTCTCCTaGTTGGTTCCCGGCGTGGGG +
Preference number: 2 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLSPVVS*LVPGVG
Trigger: CCCCACGCCGGGAACCAAGCAGGAGACGACAGGCGA...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR CAA 90 bp TTAATAAATAAGCCCGCGCAGCTGCCCTCAGCCAGGGCCTGTCGGTaGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAA +
Preference number: 2 (lower is better)
Translates to: LINKPAQLPSARACR*VSPSAGDPQCARPQ
Trigger: TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTGAGGGCAGCTGCGCGGGCTTATTTATTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR CCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAATTTTCAGGGTCTGTCTaGCTCCTCTCTCGCCTGTCG +
Preference number: 2 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQFSGSV*LLSRLS
Trigger: CGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAA...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR CAA 90 bp CCACCGCGCCTGGCCGGAACCACCTTTAATCCTCACCAGGCAACCTaGGACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: PPRLAGTTFNPHQAT*DRRNSGPDTASKVP
Trigger: GGGCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGTCCAAGGTTGCCTGGTGAGGATTAAAGGTGGTTCCGGCCAGGCGCGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
3UTR-3UTR GCA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCATCGCCTGTCGTCTCCTaGTTGGTTCCCGGCGTGGGG +
Preference number: 2 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPSPVVS*LVPGVG
Trigger: CCCCACGCCGGGAACCAAGCAGGAGACGACAGGCGA...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR GCA 90 bp ACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTGCCCAAGACCACATAGCCTCGGCCCTGGTCGTTaGTCTGGAGCTCGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: TGETRALTPLVRCPRPHSLGPGR*SGARLP
Trigger: GGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAG...GCTATGTGGTCTTGGGCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
3UTR-3UTR GCA 90 bp CTGACACCGCTAGTAAGGTGCCCAAGACCACATAGCAAGGCCGAGGACTGGGGTTTAGTACAGTCGGCCTaGCTCGCCCCACCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: LTPLVRCPRPHSKAEDWGLVQSA*LAPPPA
Trigger: TGCTGGAGGTGGGGCGAGGCAGGCCGACTGTACTAA...ACCCCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616701.5
3UTR TCA 72 bp CTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTaGATCCTGCGCCCGACCTGTGCCGCCCTCCCGGGG +
Preference number: 3 (lower is better)
Translates to: LWSSASPSLPSG*ILRPTCAALPG
Trigger: CCCCGGGAGGGCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR GCA 72 bp GCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTaGGCCCGACCTGTGCCGCCCTCCCGGGGCTGCTAC +
Preference number: 3 (lower is better)
Translates to: ARLPRPFPPAES*ARPVPPSRGCY
Trigger: GTAGCAGCCCCGGGAGGGCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR GCA 72 bp GGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTaGTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCG +
Preference number: 3 (lower is better)
Translates to: GGHSRHLLGPGR*SGARLPRPFPP
Trigger: CGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR CCA 72 bp AGCCCGCGCAGCTGCCCTCAGCCAGGGCCTGTCGGTTaGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCC +
Preference number: 3 (lower is better)
Translates to: SPRSCPQPGPVG*CLHRPVTPNVP
Trigger: GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTGAGGGCAGCTGCGCGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR CAA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCTGTCGTCTCCTGCTaGGTTCCCGGCGTGGGGACA +
Preference number: 3 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQPVVSC*VPGVGT
Trigger: TGTCCCCACGCCGGGAACCAAGCAGGAGACGACAGG...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR CAA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCCCTGTCGTCTCCTGCTaGGTTCCCGGCGTGGGGACA +
Preference number: 3 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLPVVSC*VPGVGT
Trigger: TGTCCCCACGCCGGGAACCAAGCAGGAGACGACAGG...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR CAA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCAGCCAGGGCCTGTCGGTaGGTGTCTCCATCGGCCGGT +
Preference number: 3 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPARACR*VSPSAG
Trigger: ACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR-3UTR CAA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCCTGTCGTCTCCTGCTaGGTTCCCGGCGTGGGGACA +
Preference number: 3 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSPVVSC*VPGVGT
Trigger: TGTCCCCACGCCGGGAACCAAGCAGGAGACGACAGG...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR CCA 72 bp CCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTaGCTCCTCTCTCGCCTGTCGTCTCCTGCTTGGTTC +
Preference number: 3 (lower is better)
Translates to: PGPNPSFFSGSV*LLSRLSSPAWF
Trigger: GAACCAAGCAGGAGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR GCA 72 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTaGTCACTGCTCACTACCCAAGGAGGTGGGGTCTGT +
Preference number: 3 (lower is better)
Translates to: PHLQQPSLFTAF*SLLTTQGGGVC
Trigger: ACAGACCCCACCTCCTTGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
3UTR TCA 72 bp GGTTTCACCGTGTTAGCCGGGATGGTTTCCATCTCCTaGCCTCGTGATCCGTCCGCCTGGGCCTCCGAAAGT +
Preference number: 3 (lower is better)
Translates to: GFTVLAGMVSIS*PRDPSAWASES
Trigger: ACTTTCGGAGGCCCAGGCGGACGGATCACGAGGTCAGGAGATGGAAACCATCCCGGCTAACACGGTGAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
3UTR GCA 72 bp ACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTaGCCAAGACCACATAGCAAGGCCGAGGACTGGGGT +
Preference number: 3 (lower is better)
Translates to: TGETRALTPLVR*PRPHSKAEDWG
Trigger: ACCCCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR GCA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCGGGCGGTGCGCTCGGTaGGCTCCTCTGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRGRCAR*APLPAP
Trigger: AGGTGCTGGCAGAGGAGCGCACCGAGCGCACCGCCC...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCGCTGCGGGCGGCACATaGGCAGGGAGTTCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPAAGGT*AGSSRC
Trigger: GCAGCGCGAACTCCCTGCGCATGTGCCGCCCGCAGC...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTACCAGTGCGTTGCGCTaGGCGGCCCCCGCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPTSALR*AAPAQR
Trigger: GCGCTGAGCGGGGGCCGCGCAGCGCAACGCACTGGT...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCACCAGTGCGTTGCGCTaGGCGGCCCCCGCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSTSALR*AAPAQR
Trigger: GCGCTGAGCGGGGGCCGCGCAGCGCAACGCACTGGT...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTGGACAGGCGTCCCAGTaGCGGCGCCGCCTCTACCGC +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPGQASQ*RRRLYR
Trigger: GCGGTAGAGGCGGCGCCGGCACTGGGACGCCTGTCC...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCCCGCGGCAGGAGGCATaGGTCAGCGGGTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPPRQEA*VSGSWP
Trigger: AGGCCAGGACCCGCTGACCCATGCCTCCTGCCGCGG...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000418576.3
ENST00000456560.6
CDS-3UTR CCA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCCGGTGCAACGCGATCTaGGCCACCGCGCTCCGCGAG +
Preference number: 4 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRRCNAI*ATALRE
Trigger: CTCGCGGAGCGCGGTGGCCCAGATCGCGTTGCACCG...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCGTGCAGACGCGGCCGTaGGCAGCGCAGCGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPVQTRP*AAQRCN
Trigger: GTTGCACCGCTGCGCTGCCCACGGCCGCGTCTGCAC...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTGGGCTGGAAGCGCGTaGACGCGACCCCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPWAGSA*TRPRPR
Trigger: CCTGGGACGGGGTCGCGTGCACGCGCTTCCAGCCCA...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTGGGCTGGAAGCGCGTaGACGCGACCCCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GWALQAPPRPWSLLWSSAWAGSA*TRPRPR
Trigger: CCTGGGACGGGGTCGCGTGCACGCGCTTCCAGCCCA...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCACTCCACGCGCGCCTaGAGCGAGCGGGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARHSTRA*SERGSH
Trigger: GTGTGAGCCCCGCTCGCTGCAGGCGCGCGTGGAGTG...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCCTCGGTGCGCTCCTCTaGCAGCACCTGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPLGALL*QHLGVG
Trigger: GCCCACACCCAGGTGCTGGCAGAGGAGCGCACCGAG...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCCTCGGTGCGCTCCTCTaGCAGCACCTGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRLGALL*QHLGVG
Trigger: GCCCACACCCAGGTGCTGGCAGAGGAGCGCACCGAG...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTGTAGTCCCCGGGCGGTaGGCTCGGTGCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPVVPGR*ARCAPL
Trigger: CAGAGGAGCGCACCGAGCGCACCGCCCGGGGACTAC...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCGCAGGGAGTTCGCGCTaGCACCTCCGCCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSAGSSR*HLRPAP
Trigger: TGGAGCCGGGCGGAGGTGGCAGCGCGAACTCCCTGC...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTGCTGCGGGCGGCACATaGGCAGGGAGTTCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GWALQAPPRPWSLLWSSAAAGGT*AGSSRC
Trigger: GCAGCGCGAACTCCCTGCGCATGTGCCGCCCGCAGC...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGGCTGCGGGCGGCACATaGGCAGGGAGTTCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARAAGGT*AGSSRC
Trigger: GCAGCGCGAACTCCCTGCGCATGTGCCGCCCGCAGC...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGTCCAGGGGCAGTGACTaGAGCGCAGGCTGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARSRGSD*SAGCGR
Trigger: CCGCCCGCAGCCTGCGCTGCAGTCACTGCCCCTGGA...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCAGGGGCAGTGACTaGAGCGCAGGCTGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: GWALQAPPRPWSLLWSSASRGSD*SAGCGR
Trigger: CCGCCCGCAGCCTGCGCTGCAGTCACTGCCCCTGGA...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCACCAGTGCGTTGCGCTaGGCGGCCCCCGCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: VALELGFPVPSLRLNPAPTSALR*AAPAQR
Trigger: GCGCTGAGCGGGGGCCGCGCAGCGCAACGCACTGGT...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGCTGGGGCACATGCCTaGCCGCGGGTAGGGGACGCG +
Preference number: 4 (lower is better)
Translates to: VALELGFPVPSLRLNPAPAGAHA*PRVGDA
Trigger: CGCGTCCCCTACCCGCGGCCAGGCATGTGCCCCAGC...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCCGGTGCAACGCGATCTaGGCCACCGCGCTCCGCGAG +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSRCNAI*ATALRE
Trigger: CTCGCGGAGCGCGGTGGCCCAGATCGCGTTGCACCG...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACGTGCAGACGCGGCCGTaGGCAGCGCAGCGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: ALELGFPVPSLRLNPAPDVQTRP*AAQRCN
Trigger: GTTGCACCGCTGCGCTGCCCACGGCCGCGTCTGCAC...GTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCTTGACCAGGCTGCGCTaGCCGCCCACGTCGTTCCGG +
Preference number: 4 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRLTRLR*PPTSFR
Trigger: CCGGAACGACGTGGGCGGCCAGCGCAGCCTGGTCAA...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACGGAGAGCCGAAGGCGTaGGGGGCTGGGGGCGGCACT +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNGEPKA*GAGGGT
Trigger: AGTGCCGCCCCCAGCCCCCCACGCCTTCGGCTCTCC...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTGGAGAGCCGAAGGCGTaGGGGGCTGGGGGCGGCACT +
Preference number: 4 (lower is better)
Translates to: GGHSRHLLGPGRCSGARLGEPKA*GAGGGT
Trigger: AGTGCCGCCCCCAGCCCCCCACGCCTTCGGCTCTCC...AAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGGCCCCTTCCCACCCTaGGGCCGCTGGGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: VALELGFPVPSLRLNPAPGPFPP*GRWGPS
Trigger: AGAGGGTCCCCAGCGGCCCCAGGGTGGGAAGGGGCC...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618865.4
3UTR CAA 72 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTaGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GWALQAPPRPWS*LWSSASPSLPS
Trigger: GGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCGTGTCCGTCAGCGGCTaGAACCCGGTCCGCGGCAAT +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPVSVSG*NPVRGN
Trigger: ATTGCCGCGGACCGGGTTGCAGCCGCTGACGGACAC...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTGGGCAGCGCAGCGGTaGAACGCGATCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GWALQAPPRPWSLLWSSAWAAQR*NAIWAT
Trigger: GGTGGCCCAGATCGCGTTGCACCGCTGCGCTGCCCA...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCCACTCCACGCGCGCCTaGAGCGAGCGGGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFHSTRA*SERGSH
Trigger: GTGTGAGCCCCGCTCGCTGCAGGCGCGCGTGGAGTG...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTGTAGTCCCCGGGCGGTaGGCTCGGTGCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GGHSRHLLGPGRCSGARLVVPGR*ARCAPL
Trigger: CAGAGGAGCGCACCGAGCGCACCGCCCGGGGACTAC...AAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGCAGGGAGTTCGCGCTaGCACCTCCGCCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SGARLPRPFPPAESCARPAGSSR*HLRPAP
Trigger: TGGAGCCGGGCGGAGGTGGCAGCGCGAACTCCCTGC...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCGCTGCGGGCGGCACATaGGCAGGGAGTTCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFAAGGT*AGSSRC
Trigger: GCAGCGCGAACTCCCTGCGCATGTGCCGCCCGCAGC...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTGCTGCGGGCGGCACATaGGCAGGGAGTTCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GGHSRHLLGPGRCSGARLAAGGT*AGSSRC
Trigger: GCAGCGCGAACTCCCTGCGCATGTGCCGCCCGCAGC...AAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACTCCAGGGGCAGTGACTaGAGCGCAGGCTGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNSRGSD*SAGCGR
Trigger: CCGCCCGCAGCCTGCGCTGCAGTCACTGCCCCTGGA...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTTGGTCACCAGTGCGTTaGGCTGCGCGGCCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SGARLPRPFPPAESCARPWSPVR*AARPPL
Trigger: GAGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCA...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTCAGTCTGGTCACCAGTaGGTTGCGCTGCGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPQSGHQ*VALRGP
Trigger: GGGGCCGCGCAGCGCAACGCACTGGTGACCAGACTG...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCAGTCTGGTCACCAGTaGGTTGCGCTGCGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSQSGHQ*VALRGP
Trigger: GGGGCCGCGCAGCGCAACGCACTGGTGACCAGACTG...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCAGTCTGGTCACCAGTaGGTTGCGCTGCGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: ALELGFPVPSLRLNPAPDQSGHQ*VALRGP
Trigger: GGGGCCGCGCAGCGCAACGCACTGGTGACCAGACTG...GTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCTCGCCTGTCGTCTCCTaGTTGGTTCCCGGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPSPVVS*LVPGVG
Trigger: CCCCACGCCGGGAACCAAGCAGGAGACGACAGGCGA...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCTCCGGCTGAATCCTaGGCCCGACCTGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQPPAES*ARPVPP
Trigger: GGGCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGG...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCGAGGACGGGCTCCTCTaGCCGGTGGCCCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSEDGLL*PVAHFH
Trigger: GTGGAAGTGGGCCACCGGGCAGAGGAGCCCGTCCTC...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCCCGCGGCAGGAGGCATaGGTCAGCGGGTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VALELGFPVPSLRLNPAPPRQEA*VSGSWP
Trigger: AGGCCAGGACCCGCTGACCCATGCCTCCTGCCGCGG...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456560.6
CDS-3UTR CCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAGCAGCGGGGTCCGGTaGTCCCGCGAGGACAACAGA +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPSSGVR*SREDNR
Trigger: TCTGTTGTCCTCGCGGGACCACCGGACCCCGCTGCT...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTGCTGGGGCACATGCCTaGCCGCGGGTAGGGGACGCG +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLAGAHA*PRVGDA
Trigger: CGCGTCCCCTACCCGCGGCCAGGCATGTGCCCCAGC...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTGTGCAGACGCGGCCGTaGGCAGCGCAGCGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPVQTRP*AAQRCN
Trigger: GTTGCACCGCTGCGCTGCCCACGGCCGCGTCTGCAC...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCCGAGGCTCAGGGGCGTaGGTCCTCCGGTTACGGCCC +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPRGSGA*VLRLRP
Trigger: GGGCCGTAACCGGAGGACCCACGCCCCTGAGCCTCG...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCGAGGCTCAGGGGCGTaGGTCCTCCGGTTACGGCCC +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPRGSGA*VLRLRP
Trigger: GGGCCGTAACCGGAGGACCCACGCCCCTGAGCCTCG...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCGAGGCTCAGGGGCGTaGGTCCTCCGGTTACGGCCC +
Preference number: 4 (lower is better)
Translates to: GGHSRHLLGPGRCSGARLRGSGA*VLRLRP
Trigger: GGGCCGTAACCGGAGGACCCACGCCCCTGAGCCTCG...AAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCGAGGCTCAGGGGCGTaGGTCCTCCGGTTACGGCCC +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNRGSGA*VLRLRP
Trigger: GGGCCGTAACCGGAGGACCCACGCCCCTGAGCCTCG...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCCCAGGGCCTGTCGGTTaGTGTCTCCATCGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRPGPVG*CLHRPV
Trigger: CACCGGCCGATGGAGACACCAACCGACAGGCCCTGG...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCCCTGGCCTTGCCTCCTaGTGCGAGACCCACGCGCTG +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFPGLAS*CETHAL
Trigger: CAGCGCGTGGGTCTCGCATCAGGAGGCAAGGCCAGG...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418576.3
ENST00000456560.6
CDS-3UTR GCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTTGGGCAGCGCAGCGGTaGAACGCGATCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPWAAQR*NAIWAT
Trigger: GGTGGCCCAGATCGCGTTGCACCGCTGCGCTGCCCA...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCTCGGTGCGCTCCTCTaGCAGCACCTGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNLGALL*QHLGVG
Trigger: GCCCACACCCAGGTGCTGGCAGAGGAGCGCACCGAG...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCCTCGGTGCGCTCCTCTaGCAGCACCTGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPLGALL*QHLGVG
Trigger: GCCCACACCCAGGTGCTGGCAGAGGAGCGCACCGAG...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCGGTTGCGTAAAGCCCTaGTCGACGGCGGCGCACAAG +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPGCVKP*STAAHK
Trigger: CTTGTGCGCCGCCGTCGAGCAGGGCTTTACGCAACC...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCAGGCGACGCAGCGGTTaGGTAAAGCCCTGCTCGACG +
Preference number: 4 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRRRRSG*VKPCST
Trigger: CGTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCT...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCCCCGGCTCCACCAGCTaGAGAAAGTCCCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPPGSTS*RKSRYQ
Trigger: CTGGTACCGGGACTTTCTGCAGCTGGTGGAGCCGGG...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCACCAGTGCGTTGCGCTaGGCGGCCCCCGCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLATSALR*AAPAQR
Trigger: GCGCTGAGCGGGGGCCGCGCAGCGCAACGCACTGGT...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTACCAGTGCGTTGCGCTaGGCGGCCCCCGCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPTSALR*AAPAQR
Trigger: GCGCTGAGCGGGGGCCGCGCAGCGCAACGCACTGGT...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCTCGGCCCTGGTCGTTaGTCTGGAGCTCGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARLGPGR*SGARLP
Trigger: GGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAG...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTCTCGGCCCTGGTCGTTaGTCTGGAGCTCGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GWALQAPPRPWSLLWSSALGPGR*SGARLP
Trigger: GGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAG...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGAGGACGGGCTCCTCTaGCCGGTGGCCCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: SGARLPRPFPPAESCARPEDGLL*PVAHFH
Trigger: GTGGAAGTGGGCCACCGGGCAGAGGAGCCCGTCCTC...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTGGAGGAGCCTTGAGCTaGCCTGGACTCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GWALQAPPRPWSLLWSSAGGALS*PGLCPR
Trigger: CCTGGGGCAGAGTCCAGGGCAGCTCAAGGCTCCTCC...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCAGCAGCGGGGTCCGGTaGTCCCGCGAGGACAACAGA +
Preference number: 4 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSSSGVR*SREDNR
Trigger: TCTGTTGTCCTCGCGGGACCACCGGACCCCGCTGCT...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCGCTGGGGCACATGCCTaGCCGCGGGTAGGGGACGCG +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLAAGAHA*PRVGDA
Trigger: CGCGTCCCCTACCCGCGGCCAGGCATGTGCCCCAGC...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCTGCCAAAGGTCTTGCTaGGGCACATGCCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPCQRSC*GTCLAA
Trigger: CGCGGCCAGGCATGTGCCCCAGCAAGACCTTTGGCA...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCACCGCCTCTTGGCACTaGGCTGGAAGCGCGTGCACG +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSTASWH*AGSACT
Trigger: CGTGCACGCGCTTCCAGCCCAGTGCCAAGAGGCGGT...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAAGCCGGAACCGCCTCTTaGCACTGGGCTGGAAGCGCG +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQAGTAS*HWAGSA
Trigger: CGCGCTTCCAGCCCAGTGCCAAGAGGCGGTTCCGGC...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCGCCGGAACCGCCTCTTaGCACTGGGCTGGAAGCGCG +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFAGTAS*HWAGSA
Trigger: CGCGCTTCCAGCCCAGTGCCAAGAGGCGGTTCCGGC...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGCCGGAACCGCCTCTTaGCACTGGGCTGGAAGCGCG +
Preference number: 4 (lower is better)
Translates to: SGARLPRPFPPAESCARPAGTAS*HWAGSA
Trigger: CGCGCTTCCAGCCCAGTGCCAAGAGGCGGTTCCGGC...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCTCCTCTGCCAGCACCTaGGTGTGGGCTGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPSSAST*VWAVTP
Trigger: AGGGGTGACAGCCCACACCCAGGTGCTGGCAGAGGA...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCGCACCTCCTCGGCCCTaGTCGTTGCTCTGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSAPPRP*SLLWSS
Trigger: CGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGC...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCTTGACCAGGCTGCGCTaGCCGCCCACGTCGTTCCGG +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFLTRLR*PPTSFR
Trigger: CCGGAACGACGTGGGCGGCCAGCGCAGCCTGGTCAA...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCGGAGAGCCGAAGGCGTaGGGGGCTGGGGGCGGCACT +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLAGEPKA*GAGGGT
Trigger: AGTGCCGCCCCCAGCCCCCCACGCCTTCGGCTCTCC...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
3UTR CAA 72 bp AAGCCCGCGCAGCTGCCCTCAGCCAGGGCCTGTCGGTaGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCC +
Preference number: 4 (lower is better)
Translates to: KPAQLPSARACR*VSPSAGDPQCA
Trigger: GGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTGAGGGCAGCTGCGCGGGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp GCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACGACGCGACCCTGGTATaGCACCCACTGGTGCATGGG +
Preference number: 4 (lower is better)
Translates to: ALELGFPVPSLRLNPAPDDATLV*HPLVHG
Trigger: CCCATGCACCAGTGGGTGTCATACCAGGGTCGCGTC...GTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCGACGCGACCCTGGTATaGCACCCACTGGTGCATGGG +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSDATLV*HPLVHG
Trigger: CCCATGCACCAGTGGGTGTCATACCAGGGTCGCGTC...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAATCCCTTCCCTCCGGCTaGATCCTGCGCCCGACCTGT +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQSLPSG*ILRPTC
Trigger: ACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGA...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCTCCCTTCCCTCCGGCTaGATCCTGCGCCCGACCTGT +
Preference number: 4 (lower is better)
Translates to: TSSALVVALELGFPVPSLSLPSG*ILRPTC
Trigger: ACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGA...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTAGCGGGTCCTGGCCTTaGCTCCTGATGCGAGACCCA +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPSGSWP*LLMRDP
Trigger: TGGGTCTCGCATCAGGAGGCAAGGCCAGGACCCGCT...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456560.6
CDS-3UTR GCA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGTGTCCGTCAGCGGCTaGAACCCGGTCCGCGGCAAT +
Preference number: 4 (lower is better)
Translates to: VALELGFPVPSLRLNPAPVSVSG*NPVRGN
Trigger: ATTGCCGCGGACCGGGTTGCAGCCGCTGACGGACAC...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCCTGCGCTGGGCCTACTaGCCTTGGGGACCGAGATCA +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSLRWAY*PWGPRS
Trigger: TGATCTCGGTCCCCAAGGGCAGTAGGCCCAGCGCAG...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTCTGCGCTGGGCCTACTaGCCTTGGGGACCGAGATCA +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPLRWAY*PWGPRS
Trigger: TGATCTCGGTCCCCAAGGGCAGTAGGCCCAGCGCAG...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCAGACAGCATTCGGTaGAGACGCGGCCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGHSRHLLGPGRCSGARLPDSIR*RRGRGQ
Trigger: CTGCCCACGGCCGCGTCTGCACCGAATGCTGTCTGG...AAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTCCAGACAGCATTCGGTaGAGACGCGGCCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGARLPRPFPPAESCARPPDSIR*RRGRGQ
Trigger: CTGCCCACGGCCGCGTCTGCACCGAATGCTGTCTGG...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTTGGGCTGGAAGCGCGTaGACGCGACCCCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPWAGSA*TRPRPR
Trigger: CCTGGGACGGGGTCGCGTGCACGCGCTTCCAGCCCA...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCCACTCCACGCGCGCCTaGAGCGAGCGGGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLAHSTRA*SERGSH
Trigger: GTGTGAGCCCCGCTCGCTGCAGGCGCGCGTGGAGTG...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCGTGGGCTGTCACCCCTaGGCGCTGGAAAGTCCACTC +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSVGCHP*ALESPL
Trigger: GAGTGGACTTTCCAGCGCGCAGGGGTGACAGCCCAC...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTGTGGGCTGTCACCCCTaGGCGCTGGAAAGTCCACTC +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPVGCHP*ALESPL
Trigger: GAGTGGACTTTCCAGCGCGCAGGGGTGACAGCCCAC...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGGGTTGCGTAAAGCCCTaGTCGACGGCGGCGCACAAG +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARGCVKP*STAAHK
Trigger: CTTGTGCGCCGCCGTCGAGCAGGGCTTTACGCAACC...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCAGGCGACGCAGCGGTTaGGTAAAGCCCTGCTCGACG +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSRRRSG*VKPCST
Trigger: CGTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCT...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTAGGCGACGCAGCGGTTaGGTAAAGCCCTGCTCGACG +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPRRRSG*VKPCST
Trigger: CGTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCT...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCGCCAGTCGTTCGGCCTaGGTAGCACTCAACACGTGC +
Preference number: 4 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRASRSA*VALNTC
Trigger: GCACGTGTTGAGTGCTACGCAGGCCGAACGACTGGC...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCGCAGGGAGTTCGCGCTaGCACCTCCGCCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLAAGSSR*HLRPAP
Trigger: TGGAGCCGGGCGGAGGTGGCAGCGCGAACTCCCTGC...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCTCGCCTGTCGTCTCCTaGTTGGTTCCCGGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: VALELGFPVPSLRLNPAPSPVVS*LVPGVG
Trigger: CCCCACGCCGGGAACCAAGCAGGAGACGACAGGCGA...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTTCGCCTGTCGTCTCCTaGTTGGTTCCCGGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: SGARLPRPFPPAESCARPSPVVS*LVPGVG
Trigger: CCCCACGCCGGGAACCAAGCAGGAGACGACAGGCGA...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTATAAGCCCGCGCAGCTaGCCTCAGCCAGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SGARLPRPFPPAESCARPISPRS*PQPGPV
Trigger: GACAGGCCCTGGCTGAGGGCAGCTGCGCGGGCTTAT...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCATAAGCCCGCGCAGCTaGCCTCAGCCAGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: TSSALVVALELGFPVPSLISPRS*PQPGPV
Trigger: GACAGGCCCTGGCTGAGGGCAGCTGCGCGGGCTTAT...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTGGACAGGCGTCCCAGTaGCGGCGCCGCCTCTACCGC +
Preference number: 4 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAGQASQ*RRRLYR
Trigger: GCGGTAGAGGCGGCGCCGGCACTGGGACGCCTGTCC...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCCCTCCGGCTGAATCCTaGGCCCGACCTGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLAPPAES*ARPVPP
Trigger: GGGCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGG...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCTCGGCCCTGGTCGTTaGTCTGGAGCTCGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPLGPGR*SGARLP
Trigger: GGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAG...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCTTAGTACAGTCGGCCTaGCTCGCCCCACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRLVQSA*LAPPPA
Trigger: TGCTGGAGGTGGGGCGAGGCAGGCCGACTGTACTAA...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACAGCAGCGGGGTCCGGTaGTCCCGCGAGGACAACAGA +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNSSGVR*SREDNR
Trigger: TCTGTTGTCCTCGCGGGACCACCGGACCCCGCTGCT...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACTGCCAAAGGTCTTGCTaGGGCACATGCCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: ALELGFPVPSLRLNPAPDCQRSC*GTCLAA
Trigger: CGCGGCCAGGCATGTGCCCCAGCAAGACCTTTGGCA...GTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACACCGCCTCTTGGCACTaGGCTGGAAGCGCGTGCACG +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNTASWH*AGSACT
Trigger: CGTGCACGCGCTTCCAGCCCAGTGCCAAGAGGCGGT...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTGCCGGAACCGCCTCTTaGCACTGGGCTGGAAGCGCG +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLAGTAS*HWAGSA
Trigger: CGCGCTTCCAGCCCAGTGCCAAGAGGCGGTTCCGGC...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCGTCACCCCTGCGCGCTaGAAAGTCCACTCCACGCGC +
Preference number: 4 (lower is better)
Translates to: TSSALVVALELGFPVPSLVTPAR*KVHSTR
Trigger: GCGCGTGGAGTGGACTTTCCAGCGCGCAGGGGTGAC...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGTCCTCTGCCAGCACCTaGGTGTGGGCTGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARSSAST*VWAVTP
Trigger: AGGGGTGACAGCCCACACCCAGGTGCTGGCAGAGGA...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTGTCGTCTCCTGCTTaGTTCCCGGCGTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSLSSPA*FPAWGQ
Trigger: CTGTCCCCACGCCGGGAACCAAGCAGGAGACGACAG...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCAGGGCCTGTCGGTTaGTGTCTCCATCGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQPGPVG*CLHRPV
Trigger: CACCGGCCGATGGAGACACCAACCGACAGGCCCTGG...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCCCAGGGCCTGTCGGTTaGTGTCTCCATCGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPPGPVG*CLHRPV
Trigger: CACCGGCCGATGGAGACACCAACCGACAGGCCCTGG...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCCCCTGGTCGTTGCTCTaGAGCTCGGCTTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPPWSLL*SSASPS
Trigger: GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGG...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTCCCTGGTCGTTGCTCTaGAGCTCGGCTTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SGARLPRPFPPAESCARPPWSLL*SSASPS
Trigger: GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGG...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAAGCACCTCCTCGGCCCTaGTCGTTGCTCTGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQAPPRP*SLLWSS
Trigger: CGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGC...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTGCACCTCCTCGGCCCTaGTCGTTGCTCTGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPAPPRP*SLLWSS
Trigger: CGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGC...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTGTCTGTCTCCCAGGGTaGGCACTCCAGGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPVCLPG*ALQAPP
Trigger: AGGAGGTGCCTGGAGTGCCCACCCTGGGAGACAGAC...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGGGCTCCTCTGCCCGGTaGCCCACTTCCACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARGSSAR*PTSTKA
Trigger: TGCCTTTGTGGAAGTGGGCCACCGGGCAGAGGAGCC...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCAGCGGGTGTGTGTGTaGAGGAGCCTTGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARQRVCV*RSLELP
Trigger: GGGCAGCTCAAGGCTCCTCCACACACACACCCGCTG...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACGACAAACTTGGGCTCTaGCCGCGGCAGGAGGCATGG +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNDKLGL*PRQEAW
Trigger: CCATGCCTCCTGCCGCGGTCAGAGCCCAAGTTTGTC...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418576.3
ENST00000456560.6
CDS-3UTR TCA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCAACACATCCTGGAGCTaGTCGAAGTGGGTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRNTSWS*SKWVSP
Trigger: GGGCGACACCCACTTCGATCAGCTCCAGGATGTGTT...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCCAAACTTGGGCTCATTaGGCCAGCGGGAGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRQTWAH*ASGSRV
Trigger: CACACGACTCCCGCTGGCTCAATGAGCCCAAGTTTG...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCCTGCGCTGGGCCTACTaGCCTTGGGGACCGAGATCA +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPLRWAY*PWGPRS
Trigger: TGATCTCGGTCCCCAAGGGCAGTAGGCCCAGCGCAG...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCCAGACAGCATTCGGTaGAGACGCGGCCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLPDSIR*RRGRGQ
Trigger: CTGCCCACGGCCGCGTCTGCACCGAATGCTGTCTGG...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCCTCCGGAGCACAACGTaGTGGGGTCGCCATTCCTTA +
Preference number: 4 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRLRSTT*WGRHSL
Trigger: TAAGGAATGGCGACCCCAGCACGTTGTGCTCCGGAG...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCAGAAAGGCGCTGCTaGCCTCCACGCCGAACACCT +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNPERRC*PPRRTP
Trigger: AGGTGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGG...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTACTCCAGAAAGGCGCTaGTGCCCTCCACGCCGAACA +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPTPERR*CPPRRT
Trigger: TGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGGAGT...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGACTCCAGAAAGGCGCTaGTGCCCTCCACGCCGAACA +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARTPERR*CPPRRT
Trigger: TGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGGAGT...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACACTCCAGAAAGGCGCTaGTGCCCTCCACGCCGAACA +
Preference number: 4 (lower is better)
Translates to: ALELGFPVPSLRLNPAPDTPERR*CPPRRT
Trigger: TGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGGAGT...GTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCCACTCCACGCGCGCCTaGAGCGAGCGGGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLHSTRA*SERGSH
Trigger: GTGTGAGCCCCGCTCGCTGCAGGCGCGCGTGGAGTG...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTGTGGGCTGTCACCCCTaGGCGCTGGAAAGTCCACTC +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPVGCHP*ALESPL
Trigger: GAGTGGACTTTCCAGCGCGCAGGGGTGACAGCCCAC...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGGGCTGTCACCCCTaGGCGCTGGAAAGTCCACTC +
Preference number: 4 (lower is better)
Translates to: SGARLPRPFPPAESCARPVGCHP*ALESPL
Trigger: GAGTGGACTTTCCAGCGCGCAGGGGTGACAGCCCAC...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGTGGGCTGTCACCCCTaGGCGCTGGAAAGTCCACTC +
Preference number: 4 (lower is better)
Translates to: VALELGFPVPSLRLNPAPVGCHP*ALESPL
Trigger: GAGTGGACTTTCCAGCGCGCAGGGGTGACAGCCCAC...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCGGGCGGTGCGCTCGGTaGGCTCCTCTGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLGRCAR*APLPAP
Trigger: AGGTGCTGGCAGAGGAGCGCACCGAGCGCACCGCCC...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTGGGCGGTGCGCTCGGTaGGCTCCTCTGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAGRCAR*APLPAP
Trigger: AGGTGCTGGCAGAGGAGCGCACCGAGCGCACCGCCC...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGTTGCGTAAAGCCCTaGTCGACGGCGGCGCACAAG +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPGCVKP*STAAHK
Trigger: CTTGTGCGCCGCCGTCGAGCAGGGCTTTACGCAACC...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCAGGCGACGCAGCGGTTaGGTAAAGCCCTGCTCGACG +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPRRRSG*VKPCST
Trigger: CGTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCT...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTGTAGCACTCAACACGTaGAGCGACAGGCGACGCAGC +
Preference number: 4 (lower is better)
Translates to: GWALQAPPRPWSLLWSSAVALNT*SDRRRS
Trigger: GCTGCGTCGCCTGTCGCTGCACGTGTTGAGTGCTAC...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCGTAGCACTCAACACGTaGAGCGACAGGCGACGCAGC +
Preference number: 4 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSVALNT*SDRRRS
Trigger: GCTGCGTCGCCTGTCGCTGCACGTGTTGAGTGCTAC...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCCCCGGCTCCACCAGCTaGAGAAAGTCCCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFPGSTS*RKSRYQ
Trigger: CTGGTACCGGGACTTTCTGCAGCTGGTGGAGCCGGG...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCCGGCTCCACCAGCTaGAGAAAGTCCCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNPGSTS*RKSRYQ
Trigger: CTGGTACCGGGACTTTCTGCAGCTGGTGGAGCCGGG...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGGCTCCACCAGCTaGAGAAAGTCCCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQPGSTS*RKSRYQ
Trigger: CTGGTACCGGGACTTTCTGCAGCTGGTGGAGCCGGG...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTCCCGGCTCCACCAGCTaGAGAAAGTCCCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: SGARLPRPFPPAESCARPPGSTS*RKSRYQ
Trigger: CTGGTACCGGGACTTTCTGCAGCTGGTGGAGCCGGG...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTTGGTCACCAGTGCGTTaGGCTGCGCGGCCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAWSPVR*AARPPL
Trigger: GAGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCA...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCCAGTCTGGTCACCAGTaGGTTGCGCTGCGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLAQSGHQ*VALRGP
Trigger: GGGGCCGCGCAGCGCAACGCACTGGTGACCAGACTG...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTATAAGCCCGCGCAGCTaGCCTCAGCCAGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLISPRS*PQPGPV
Trigger: GACAGGCCCTGGCTGAGGGCAGCTGCGCGGGCTTAT...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAAGGTGGAAGGCTCCCGTaGCACAGGCCAGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQGGRLP*HRPANG
Trigger: CCCATTTGCTGGCCTGTGGCACGGGAGCCTTCCACC...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTGGTGGAAGGCTCCCGTaGCACAGGCCAGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPGGRLP*HRPANG
Trigger: CCCATTTGCTGGCCTGTGGCACGGGAGCCTTCCACC...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACGGTGGAAGGCTCCCGTaGCACAGGCCAGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNGGRLP*HRPANG
Trigger: CCCATTTGCTGGCCTGTGGCACGGGAGCCTTCCACC...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCGAGGACGGGCTCCTCTaGCCGGTGGCCCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLAEDGLL*PVAHFH
Trigger: GTGGAAGTGGGCCACCGGGCAGAGGAGCCCGTCCTC...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAAAGCTGCCCTGGACTCTaGCCCAGGATCGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQSCPGL*PRIAAS
Trigger: AGAGGCAGCGATCCTGGGGCAGAGTCCAGGGCAGCT...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618865.4
CDS-3UTR CCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCTTGACCAGGCTGCGCTaGCCGCCCACGTCGTTCTTG +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPLTRLR*PPTSFL
Trigger: CAAGAACGACGTGGGCGGCCAGCGCAGCCTGGTCAA...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418576.3
CDS-3UTR CCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCCACACCGCAGAGCCCTaGAAGATGCTGCTGGACGTG +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSHTAEP*KMLLDV
Trigger: CACGTCCAGCAGCATCTTCCAGGGCTCTGCGGTGTG...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418576.3
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCACACCCACTGGTGCATaGGCCCCTCCTTGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPTPTGA*APPCVQ
Trigger: TTGCACACAAGGAGGGGCCCATGCACCAGTGGGTGT...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCGCTGGGGCACATGCCTaGCCGCGGGTAGGGGACGCG +
Preference number: 4 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTAGAHA*PRVGDA
Trigger: CGCGTCCCCTACCCGCGGCCAGGCATGTGCCCCAGC...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCTGCCAAAGGTCTTGCTaGGGCACATGCCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPCQRSC*GTCLAA
Trigger: CGCGGCCAGGCATGTGCCCCAGCAAGACCTTTGGCA...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCTGGGCCTACTGCCCTTaGGGACCGAGATCACCTTCA +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPWAYCP*GPRSPS
Trigger: TGAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCA...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCTGGGCCTACTGCCCTTaGGGACCGAGATCACCTTCA +
Preference number: 4 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRWAYCP*GPRSPS
Trigger: TGAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCA...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGCCGGAACCGCCTCTTaGCACTGGGCTGGAAGCGCG +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPAGTAS*HWAGSA
Trigger: CGCGCTTCCAGCCCAGTGCCAAGAGGCGGTTCCGGC...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCCGGAGCACAACGTGCTaGGGTCGCCATTCCTTACGT +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPRSTTC*GRHSLR
Trigger: ACGTAAGGAATGGCGACCCCAGCACGTTGTGCTCCG...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAATCCTCTGCCAGCACCTaGGTGTGGGCTGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQSSAST*VWAVTP
Trigger: AGGGGTGACAGCCCACACCCAGGTGCTGGCAGAGGA...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCTCCTCTGCCAGCACCTaGGTGTGGGCTGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: TSSALVVALELGFPVPSLSSAST*VWAVTP
Trigger: AGGGGTGACAGCCCACACCCAGGTGCTGGCAGAGGA...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTGGCGTGGGGACAGTCTaGTCACCAGTGCGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPGVGTV*SPVRCA
Trigger: AGCGCAACGCACTGGTGACCAGACTGTCCCCACGCC...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGGCGTGGGGACAGTCTaGTCACCAGTGCGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: VALELGFPVPSLRLNPAPGVGTV*SPVRCA
Trigger: AGCGCAACGCACTGGTGACCAGACTGTCCCCACGCC...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGCTTGGTTCCCGGCGTaGGGACAGTCTGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPAWFPA*GQSGHQ
Trigger: CTGGTGACCAGACTGTCCCCACGCCGGGAACCAAGC...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTGCTTGGTTCCCGGCGTaGGGACAGTCTGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPAWFPA*GQSGHQ
Trigger: CTGGTGACCAGACTGTCCCCACGCCGGGAACCAAGC...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCCTGTCGTCTCCTGCTTaGTTCCCGGCGTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFLSSPA*FPAWGQ
Trigger: CTGTCCCCACGCCGGGAACCAAGCAGGAGACGACAG...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCTGTCGTCTCCTGCTTaGTTCCCGGCGTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: GGHSRHLLGPGRCSGARLLSSPA*FPAWGQ
Trigger: CTGTCCCCACGCCGGGAACCAAGCAGGAGACGACAG...AAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTGCACCTCCTCGGCCCTaGTCGTTGCTCTGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLAPPRP*SLLWSS
Trigger: CGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGC...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTTTGACCAGGCTGCGCTaGCCGCCCACGTCGTTCCGG +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPLTRLR*PPTSFR
Trigger: CCGGAACGACGTGGGCGGCCAGCGCAGCCTGGTCAA...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTGGCTCCTCTGCCCGGTaGCCCACTTCCACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPGSSAR*PTSTKA
Trigger: TGCCTTTGTGGAAGTGGGCCACCGGGCAGAGGAGCC...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCATCCTCTATCCTTCCTaGGTCCAGCCGGAGGACGGG +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSILYPS*VQPEDG
Trigger: CCCGTCCTCCGGCTGGACCCAGGAAGGATAGAGGAT...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTATCCTCTATCCTTCCTaGGTCCAGCCGGAGGACGGG +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPILYPS*VQPEDG
Trigger: CCCGTCCTCCGGCTGGACCCAGGAAGGATAGAGGAT...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCAGGCCTGGAGCTCTTaGAAGGAGAGCCGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: ALELGFPVPSLRLNPAPDQAWSS*KESRRR
Trigger: ACGCCTTCGGCTCTCCTTCCAAGAGCTCCAGGCCTG...GTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCCCTGGCCTTGCCTCCTaGTGCGAGACCCACGCGCTG +
Preference number: 4 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLPGLAS*CETHAL
Trigger: CAGCGCGTGGGTCTCGCATCAGGAGGCAAGGCCAGG...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418576.3
ENST00000456560.6
CDS-3UTR TCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGAACACATCCTGGAGCTaGTCGAAGTGGGTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARNTSWS*SKWVSP
Trigger: GGGCGACACCCACTTCGATCAGCTCCAGGATGTGTT...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTGACGCGACCCTGGTATaGCACCCACTGGTGCATGGG +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLDATLV*HPLVHG
Trigger: CCCATGCACCAGTGGGTGTCATACCAGGGTCGCGTC...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTTCCCTTCCCTCCGGCTaGATCCTGCGCCCGACCTGT +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPSLPSG*ILRPTC
Trigger: ACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGA...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTAGGTTCGCTCCAGGCTaGAAGTCTGGAGACCATGCC +
Preference number: 4 (lower is better)
Translates to: GWALQAPPRPWSLLWSSARFAPG*KSGDHA
Trigger: GGCATGGTCTCCAGACTTTCAGCCTGGAGCGAACCT...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTAGCGGGTCCTGGCCTTaGCTCCTGATGCGAGACCCA +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLSGSWP*LLMRDP
Trigger: TGGGTCTCGCATCAGGAGGCAAGGCCAGGACCCGCT...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418576.3
ENST00000456560.6
CDS-3UTR GCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCAGGTGCCAAAGGTCTTaGTGGGGCACATGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPRCQRS*WGTCLA
Trigger: GGCCAGGCATGTGCCCCAGCAAGACCTTTGGCACCT...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCTGCGCTGGGCCTACTaGCCTTGGGGACCGAGATCA +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLLRWAY*PWGPRS
Trigger: TGATCTCGGTCCCCAAGGGCAGTAGGCCCAGCGCAG...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTTGGGCAGCGCAGCGGTaGAACGCGATCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAWAAQR*NAIWAT
Trigger: GGTGGCCCAGATCGCGTTGCACCGCTGCGCTGCCCA...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTCCAGACAGCATTCGGTaGAGACGCGGCCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPPDSIR*RRGRGQ
Trigger: CTGCCCACGGCCGCGTCTGCACCGAATGCTGTCTGG...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCCATTCCTTACGTCTTaGCGCCGGAACCGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: ALELGFPVPSLRLNPAPDPFLTS*RRNRLL
Trigger: CAAGAGGCGGTTCCGGCGGCAAGACGTAAGGAATGG...GTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTCTCCGGAGCACAACGTaGTGGGGTCGCCATTCCTTA +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPLRSTT*WGRHSL
Trigger: TAAGGAATGGCGACCCCAGCACGTTGTGCTCCGGAG...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAAACTCCAGAAAGGCGCTaGTGCCCTCCACGCCGAACA +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQTPERR*CPPRRT
Trigger: TGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGGAGT...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGGGCGGTGCGCTCGGTaGGCTCCTCTGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLGRCAR*APLPAP
Trigger: AGGTGCTGGCAGAGGAGCGCACCGAGCGCACCGCCC...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGTAGTCCCCGGGCGGTaGGCTCGGTGCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLVVPGR*ARCAPL
Trigger: CAGAGGAGCGCACCGAGCGCACCGCCCGGGGACTAC...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCGTAGCACTCAACACGTaGAGCGACAGGCGACGCAGC +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFVALNT*SDRRRS
Trigger: GCTGCGTCGCCTGTCGCTGCACGTGTTGAGTGCTAC...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCCTGACACCGCTAGTAAGGTGCCCAAGACCACATAGCAAGGCCGAGGACTGGGCAGGGAGTTCGCGCTaGCACCTCCGCCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ALTPLVRCPRPHSKAEDWAGSSR*HLRPAP
Trigger: TGGAGCCGGGCGGAGGTGGCAGCGCGAACTCCCTGC...CCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGTCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR GCA 90 bp GCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTTCCAGGGGCAGTGACTaGAGCGCAGGCTGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: APTRPSFQGLSGSSLACRSRGSD*SAGCGR
Trigger: CCGCCCGCAGCCTGCGCTGCAGTCACTGCCCCTGGA...ACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTTGGTCACCAGTGCGTTaGGCTGCGCGGCCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: APTRPSFQGLSGSSLACRWSPVR*AARPPL
Trigger: GAGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCA...ACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGCCCTCCCGGGGCTaGTACATTCAAGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPPPSRG*YIQGLS
Trigger: GGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGG...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAATTAGTACAGTCGGCCTaGCTCGCCCCACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQLVQSA*LAPPPA
Trigger: TGCTGGAGGTGGGGCGAGGCAGGCCGACTGTACTAA...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCAGAGCCCTGGAAGATaGTGGACGTGGAGAAGACGG +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARQSPGR*WTWRRR
Trigger: CCGTCTTCTCCACGTCCAGCATCTTCCAGGGCTCTG...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433753.4
ENST00000456560.6
CDS-3UTR GCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCCTCAGCAGCTCAGGGTaGTCAGGGTTCAGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFLSSSG*SGFSGC
Trigger: ACACCCGCTGAACCCTGAGCACCCTGAGCTGCTGAG...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCCTTCCCTGCCCAGTTaGACTCCTCTCGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: ALELGFPVPSLRLNPAPDPSLPS*TPLAIP
Trigger: TGGAATGGCGAGAGGAGTGCAACTGGGCAGGGAAGG...GTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTAGCAGCGGGGTCCGGTaGTCCCGCGAGGACAACAGA +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPSSGVR*SREDNR
Trigger: TCTGTTGTCCTCGCGGGACCACCGGACCCCGCTGCT...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACACACCGCAGAGCCCTaGAAGATGCTGCTGGACGTG +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQHTAEP*KMLLDV
Trigger: CACGTCCAGCAGCATCTTCCAGGGCTCTGCGGTGTG...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418576.3
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTACACCCACTGGTGCATaGGCCCCTCCTTGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPTPTGA*APPCVQ
Trigger: TTGCACACAAGGAGGGGCCCATGCACCAGTGGGTGT...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCAGCTGGGGCACATGCCTaGCCGCGGGTAGGGGACGCG +
Preference number: 4 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPAGAHA*PRVGDA
Trigger: CGCGTCCCCTACCCGCGGCCAGGCATGTGCCCCAGC...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTGGGCCTACTGCCCTTaGGGACCGAGATCACCTTCA +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPWAYCP*GPRSPS
Trigger: TGAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCA...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCGGTGCAACGCGATCTaGGCCACCGCGCTCCGCGAG +
Preference number: 4 (lower is better)
Translates to: APTRPSFQGLSGSSLACRRCNAI*ATALRE
Trigger: CTCGCGGAGCGCGGTGGCCCAGATCGCGTTGCACCG...ACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCCGGTGCAACGCGATCTaGGCCACCGCGCTCCGCGAG +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLRCNAI*ATALRE
Trigger: CTCGCGGAGCGCGGTGGCCCAGATCGCGTTGCACCG...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCACCGCCTCTTGGCACTaGGCTGGAAGCGCGTGCACG +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLATASWH*AGSACT
Trigger: CGTGCACGCGCTTCCAGCCCAGTGCCAAGAGGCGGT...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCGGAGCACAACGTGCTaGGGTCGCCATTCCTTACGT +
Preference number: 4 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSRSTTC*GRHSLR
Trigger: ACGTAAGGAATGGCGACCCCAGCACGTTGTGCTCCG...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCGTCACCCCTGCGCGCTaGAAAGTCCACTCCACGCGC +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLAVTPAR*KVHSTR
Trigger: GCGCGTGGAGTGGACTTTCCAGCGCGCAGGGGTGAC...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCTTTTCAGGGTCTGTCTaGCTCCTCTCTCGCCTGTCG +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPFSGSV*LLSRLS
Trigger: CGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAA...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCCCCTGGTCGTTGCTCTaGAGCTCGGCTTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLAPWSLL*SSASPS
Trigger: GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGG...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCAGCACCATGTCCAGTTaGCGCTCTGCGCGGACCGAA +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFSTMSS*RSARTE
Trigger: TTCGGTCCGCGCAGAGCGCCAACTGGACATGGTGCT...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456560.6
CDS-3UTR CCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTTCGTTCCGGCAGATCTaGCCAACGCGGGACACGGAC +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLSFRQI*PTRDTD
Trigger: GTCCGTGTCCCGCGTTGGCCAGATCTGCCGGAACGA...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCACACCGCAGAGCCCTaGAAGATGCTGGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: TSSALVVALELGFPVPSLHTAEP*KMLDVE
Trigger: CTCCACGTCCAGCATCTTCCAGGGCTCTGCGGTGTG...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433753.4
ENST00000456560.6
CDS-3UTR CCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACATCCTCTATCCTTCCTaGGTCCAGCCGGAGGACGGG +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNILYPS*VQPEDG
Trigger: CCCGTCCTCCGGCTGGACCCAGGAAGGATAGAGGAT...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCAGCGGGAGTCGTGTaGCTCTGTTCGGAGACTTGG +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPPAGVV*LCSETW
Trigger: CCAAGTCTCCGAACAGAGCCACACGACTCCCGCTGG...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCAGCGGGTGTGTGTGTaGAGGAGCCTTGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLQRVCV*RSLELP
Trigger: GGGCAGCTCAAGGCTCCTCCACACACACACCCGCTG...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCAGGCCTGGAGCTCTTaGAAGGAGAGCCGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPQAWSS*KESRRR
Trigger: ACGCCTTCGGCTCTCCTTCCAAGAGCTCCAGGCCTG...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCTCACCAGGCAACCTTaGACAGGAGAAACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARLTRQP*TGETRA
Trigger: GGCCCGAGTTTCTCCTGTCCAAGGTTGCCTGGTGAG...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR TCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCCGCCCACGTCGTTCTTaGCAAACTTGGGCTCTGACC +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFRPRRS*QTWALT
Trigger: GGTCAGAGCCCAAGTTTGTCAAGAACGACGTGGGCG...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418576.3
CDS-3UTR TCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCAACACATCCTGGAGCTaGTCGAAGTGGGTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPNTSWS*SKWVSP
Trigger: GGGCGACACCCACTTCGATCAGCTCCAGGATGTGTT...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGTCCGCGCAAACTGGATaGCATCGTCTGGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARSAQTG*HRLGSP
Trigger: AGGACTTCCCAGACGATGTCATCCAGTTTGCGCGGA...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCAGAGCCCTGGAAGATaGTGCTGGACGTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARQSPGR*CWTWRR
Trigger: TCTTCTCCACGTCCAGCAGCATCTTCCAGGGCTCTG...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418576.3
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCCAGAGCCCTGGAAGATaGTGCTGGACGTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSQSPGR*CWTWRR
Trigger: TCTTCTCCACGTCCAGCAGCATCTTCCAGGGCTCTG...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418576.3
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTGGCGCACGTCGTTCATaGTGTACACGCACACCGCAG +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLGARRS*CTRTPQ
Trigger: CTGCGGTGTGCGTGTACAGCATGAACGACGTGCGCC...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTCTGCGCTGGGCCTACTaGCCTTGGGGACCGAGATCA +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPLRWAY*PWGPRS
Trigger: TGATCTCGGTCCCCAAGGGCAGTAGGCCCAGCGCAG...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTTGGGCTGGAAGCGCGTaGACGCGACCCCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSWAGSA*TRPRPR
Trigger: CCTGGGACGGGGTCGCGTGCACGCGCTTCCAGCCCA...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCATTCCTTACGTCTTaGCGCCGGAACCGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQPFLTS*RRNRLL
Trigger: CAAGAGGCGGTTCCGGCGGCAAGACGTAAGGAATGG...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCCTCCGGAGCACAACGTaGTGGGGTCGCCATTCCTTA +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPLRSTT*WGRHSL
Trigger: TAAGGAATGGCGACCCCAGCACGTTGTGCTCCGGAG...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCTCCGGAGCACAACGTaGTGGGGTCGCCATTCCTTA +
Preference number: 4 (lower is better)
Translates to: TSSALVVALELGFPVPSLLRSTT*WGRHSL
Trigger: TAAGGAATGGCGACCCCAGCACGTTGTGCTCCGGAG...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTCCAGAAAGGCGCTGCTaGCCTCCACGCCGAACACCT +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPPERRC*PPRRTP
Trigger: AGGTGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGG...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCTCGGTGCGCTCCTCTaGCAGCACCTGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTLGALL*QHLGVG
Trigger: GCCCACACCCAGGTGCTGGCAGAGGAGCGCACCGAG...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCAGGGCGGTGCGCTCGGTaGGCTCCTCTGCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPGRCAR*APLPAP
Trigger: AGGTGCTGGCAGAGGAGCGCACCGAGCGCACCGCCC...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ACCAGGCAACCTTGGACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTGCGTAGTCCCCGGGCGGTaGGCTCGGTGCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TRQPWTGETRALTPLVRCVVPGR*ARCAPL
Trigger: CAGAGGAGCGCACCGAGCGCACCGCCCGGGGACTAC...GCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGTCCAAGGTTGCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR GCA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATGTAGTCCCCGGGCGGTaGGCTCGGTGCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNVVPGR*ARCAPL
Trigger: CAGAGGAGCGCACCGAGCGCACCGCCCGGGGACTAC...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTGCAGGGAGTTCGCGCTaGCACCTCCGCCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSAGSSR*HLRPAP
Trigger: TGGAGCCGGGCGGAGGTGGCAGCGCGAACTCCCTGC...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTTCCAGGGGCAGTGACTaGAGCGCAGGCTGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSSRGSD*SAGCGR
Trigger: CCGCCCGCAGCCTGCGCTGCAGTCACTGCCCCTGGA...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTTGGTCACCAGTGCGTTaGGCTGCGCGGCCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSWSPVR*AARPPL
Trigger: GAGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCA...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTTGGTCACCAGTGCGTTaGGCTGCGCGGCCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSWSPVR*AARPPL
Trigger: GAGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCA...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCCAGTCTGGTCACCAGTaGGTTGCGCTGCGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLQSGHQ*VALRGP
Trigger: GGGGCCGCGCAGCGCAACGCACTGGTGACCAGACTG...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCATAAGCCCGCGCAGCTaGCCTCAGCCAGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLISPRS*PQPGPV
Trigger: GACAGGCCCTGGCTGAGGGCAGCTGCGCGGGCTTAT...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCACCTCCGGCTGAATCCTaGGCCCGACCTGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPPPAES*ARPVPP
Trigger: GGGCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGG...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCCTCCGGCTGAATCCTaGGCCCGACCTGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSPPAES*ARPVPP
Trigger: GGGCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGG...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACAGGCCAGCAAATGGGTaGGGTTGTAGGCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: ALELGFPVPSLRLNPAPDRPANG*GCRHAA
Trigger: TGCTGCATGCCTACAACCGCACCCATTTGCTGGCCT...GTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCTCAGCAGCTCAGGGTaGTCAGGGTTCAGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLLSSSG*SGFSGC
Trigger: ACACCCGCTGAACCCTGAGCACCCTGAGCTGCTGAG...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCCTTCCCTGCCCAGTTaGACTCCTCTCGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: TSSALVVALELGFPVPSLPSLPS*TPLAIP
Trigger: TGGAATGGCGAGAGGAGTGCAACTGGGCAGGGAAGG...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCACCAATGTCCTTCCCTaGCCAGTTGCACTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSTNVLP*PVALLS
Trigger: CGAGAGGAGTGCAACTGGGCAGGGAAGGACATTGGT...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTGGAGGAGCCTTGAGCTaGCCTGGACTCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAGGALS*PGLCPR
Trigger: CCTGGGGCAGAGTCCAGGGCAGCTCAAGGCTCCTCC...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTTGGGTCAGCGGGTCCTaGCCTTGCCTCCTGATGCGA +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPWVSGS*PCLLMR
Trigger: TCGCATCAGGAGGCAAGGCCAGGACCCGCTGACCCA...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418576.3
ENST00000456560.6
CDS-3UTR CCA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTAGCAGCGGGGTCCGGTaGTCCCGCGAGGACAACAGA +
Preference number: 4 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACSSGVR*SREDNR
Trigger: TCTGTTGTCCTCGCGGGACCACCGGACCCCGCTGCT...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCCCTGGAAGATGCTGCTaGACGTGGAGAAGACGGCAT +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSPGRCC*TWRRRH
Trigger: ATGCCGTCTTCTCCACGTCCAGCAGCATCTTCCAGG...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000418576.3
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACTGGTATGACACCCACTaGTGCATGGGCCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNWYDTH*CMGPSL
Trigger: CAAGGAGGGGCCCATGCACCAGTGGGTGTCATACCA...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTTGCCAAAGGTCTTGCTaGGGCACATGCCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPCQRSC*GTCLAA
Trigger: CGCGGCCAGGCATGTGCCCCAGCAAGACCTTTGGCA...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATGTGCAGACGCGGCCGTaGGCAGCGCAGCGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNVQTRP*AAQRCN
Trigger: GTTGCACCGCTGCGCTGCCCACGGCCGCGTCTGCAC...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTGTGCAGACGCGGCCGTaGGCAGCGCAGCGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSVQTRP*AAQRCN
Trigger: GTTGCACCGCTGCGCTGCCCACGGCCGCGTCTGCAC...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGAGCACAACGTGCTaGGGTCGCCATTCCTTACGT +
Preference number: 4 (lower is better)
Translates to: TSSALVVALELGFPVPSLRSTTC*GRHSLR
Trigger: ACGTAAGGAATGGCGACCCCAGCACGTTGTGCTCCG...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTGTCACCCCTGCGCGCTaGAAAGTCCACTCCACGCGC +
Preference number: 4 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAVTPAR*KVHSTR
Trigger: GCGCGTGGAGTGGACTTTCCAGCGCGCAGGGGTGAC...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTGTCACCCCTGCGCGCTaGAAAGTCCACTCCACGCGC +
Preference number: 4 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACVTPAR*KVHSTR
Trigger: GCGCGTGGAGTGGACTTTCCAGCGCGCAGGGGTGAC...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGAGGCTCAGGGGCGTaGGTCCTCCGGTTACGGCCC +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSRGSGA*VLRLRP
Trigger: GGGCCGTAACCGGAGGACCCACGCCCCTGAGCCTCG...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGGCGTGGGGACAGTCTaGTCACCAGTGCGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPGVGTV*SPVRCA
Trigger: AGCGCAACGCACTGGTGACCAGACTGTCCCCACGCC...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCGCTTGGTTCCCGGCGTaGGGACAGTCTGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLAAWFPA*GQSGHQ
Trigger: CTGGTGACCAGACTGTCCCCACGCCGGGAACCAAGC...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCCCAGGGCCTGTCGGTTaGTGTCTCCATCGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLPGPVG*CLHRPV
Trigger: CACCGGCCGATGGAGACACCAACCGACAGGCCCTGG...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCAGCCCTGGAAGATGCTaGACGTGGAGAAGACGGCAT +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSSPGRC*TWRRRH
Trigger: ATGCCGTCTTCTCCACGTCCAGCATCTTCCAGGGCT...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433753.4
ENST00000456560.6
CDS-3UTR CCA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCAGGCAGCCCGATGCCTaGGGTCATAAGGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: VALELGFPVPSLRLNPAPRQPDA*GHKDSS
Trigger: GGAAGAGTCCTTATGACCCCAGGCATCGGGCTGCCT...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCTTGAGGGAGGCCACATaGTTCTCGGCACCCACAAAC +
Preference number: 4 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSLREAT*FSAPTN
Trigger: GTTTGTGGGTGCCGAGAACCATGTGGCCTCCCTCAA...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCAAATTTGCATGCTGGTaGCAGCGGCCGAGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSKFACW*QRPSPQ
Trigger: TTGAGGACTCGGCCGCTGTCACCAGCATGCAAATTT...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTAAATTTGCATGCTGGTaGCAGCGGCCGAGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GWALQAPPRPWSLLWSSAKFACW*QRPSPQ
Trigger: TTGAGGACTCGGCCGCTGTCACCAGCATGCAAATTT...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCCAGAGCCCTGGAAGATaGTGCTGGACGTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPQSPGR*CWTWRR
Trigger: TCTTCTCCACGTCCAGCAGCATCTTCCAGGGCTCTG...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418576.3
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCTATGACACCCACTGGTaGATGGGCCCCTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: TSSALVVALELGFPVPSLYDTHW*MGPSLC
Trigger: ACACAAGGAGGGGCCCATGCACCAGTGGGTGTCATA...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTAGGTGCCAAAGGTCTTaGTGGGGCACATGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPRCQRS*WGTCLA
Trigger: GGCCAGGCATGTGCCCCAGCAAGACCTTTGGCACCT...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCGTGTCCGTCAGCGGCTaGAACCCGGTCCGCGGCAAT +
Preference number: 4 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTVSVSG*NPVRGN
Trigger: ATTGCCGCGGACCGGGTTGCAGCCGCTGACGGACAC...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTTGGGCAGCGCAGCGGTaGAACGCGATCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSWAAQR*NAIWAT
Trigger: GGTGGCCCAGATCGCGTTGCACCGCTGCGCTGCCCA...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCCAGACAGCATTCGGTaGAGACGCGGCCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTPDSIR*RRGRGQ
Trigger: CTGCCCACGGCCGCGTCTGCACCGAATGCTGTCTGG...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCCAGAAAGGCGCTGCTaGCCTCCACGCCGAACACCT +
Preference number: 4 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACPERRC*PPRRTP
Trigger: AGGTGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGG...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTGGTTGCGTAAAGCCCTaGTCGACGGCGGCGCACAAG +
Preference number: 4 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAGCVKP*STAAHK
Trigger: CTTGTGCGCCGCCGTCGAGCAGGGCTTTACGCAACC...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ACACCGCTAGTAAGGTGCCCAAGACCACATAGCAAGGCCGAGGACTGGGGTTTTGGACAGGCGTCCCAGTaGCGGCGCCGCCTCTACCGC +
Preference number: 4 (lower is better)
Translates to: TPLVRCPRPHSKAEDWGFGQASQ*RRRLYR
Trigger: GCGGTAGAGGCGGCGCCGGCACTGGGACGCCTGTCC...AAAACCCCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR GCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAAAGGCCAGCAAATGGGTaGGGTTGTAGGCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQRPANG*GCRHAA
Trigger: TGCTGCATGCCTACAACCGCACCCATTTGCTGGCCT...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCGGAGACTTGGACGTTaGCCTAGGCTGCGAAAGATG +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPRRLGR*PRLRKM
Trigger: CATCTTTCGCAGCCTAGGGCAACGTCCAAGTCTCCG...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCGGAGACTTGGACGTTaGCCTAGGCTGCGAAAGATG +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNRRLGR*PRLRKM
Trigger: CATCTTTCGCAGCCTAGGGCAACGTCCAAGTCTCCG...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCACCAATGTCCTTCCCTaGCCAGTTGCACTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPTNVLP*PVALLS
Trigger: CGAGAGGAGTGCAACTGGGCAGGGAAGGACATTGGT...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACACCAATGTCCTTCCCTaGCCAGTTGCACTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNTNVLP*PVALLS
Trigger: CGAGAGGAGTGCAACTGGGCAGGGAAGGACATTGGT...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCCTGCCCCAGGATCGCTaGCTCTTCTCAGGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPLPQDR*LFSGSR
Trigger: TCTAGAACCTGAGAAGAGGCAGCGATCCTGGGGCAG...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618865.4
CDS-3UTR CCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCAGATGCTGCTGGACGTaGAGAAGACGGCATAGAGCA +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSRCCWT*RRRHRA
Trigger: TGCTCTATGCCGTCTTCTCCACGTCCAGCAGCATCT...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418576.3
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTTGGTATGACACCCACTaGTGCATGGGCCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLWYDTH*CMGPSL
Trigger: CAAGGAGGGGCCCATGCACCAGTGGGTGTCATACCA...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTTGTACATGAGGGGGTaGTTCCGCGCAAACTGGATG +
Preference number: 4 (lower is better)
Translates to: GWALQAPPRPWSLLWSSALYMRG*FRANWM
Trigger: CATCCAGTTTGCGCGGAACCACCCCCTCATGTACAA...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCACCGCCTCTTGGCACTaGGCTGGAAGCGCGTGCACG +
Preference number: 4 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTTASWH*AGSACT
Trigger: CGTGCACGCGCTTCCAGCCCAGTGCCAAGAGGCGGT...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTGTCACCCCTGCGCGCTaGAAAGTCCACTCCACGCGC +
Preference number: 4 (lower is better)
Translates to: APTRPSFQGLSGSSLACRVTPAR*KVHSTR
Trigger: GCGCGTGGAGTGGACTTTCCAGCGCGCAGGGGTGAC...ACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTGATTTTGTCGTCGTCTaGGTTCTCGCTCTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPDFVVV*VLALRD
Trigger: ATCCCGGAGAGCGAGAACCCAGACGACGACAAAATC...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGGATTTTGTCGTCGTCTaGGTTCTCGCTCTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARDFVVV*VLALRD
Trigger: ATCCCGGAGAGCGAGAACCCAGACGACGACAAAATC...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTAGACCATGCCAGGCCTaGAGCTCTTGGAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLRPCQA*SSWKES
Trigger: GCTCTCCTTCCAAGAGCTCCAGGCCTGGCATGGTCT...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCTTGAGGGAGGCCACATaGTTCTCGGCACCCACAAAC +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFLREAT*FSAPTN
Trigger: GTTTGTGGGTGCCGAGAACCATGTGGCCTCCCTCAA...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCACTGGGGTTTTCTGCTaGGGCCATTCCAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFTGVFC*GHSSFG
Trigger: GCCAAAGCTGGAATGGCCCCAGCAGAAAACCCCAGT...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR CCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCGGCCTCCGAAAGTGTTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFGLRKC*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAACACTTTCGGAGGCC...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR TCA 90 bp GCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTGACAAACTTGGGCTCTaGCCGCGGCAGGAGGCATGG +
Preference number: 4 (lower is better)
Translates to: APTRPSFQGLSGSSLACRDKLGL*PRQEAW
Trigger: CCATGCCTCCTGCCGCGGTCAGAGCCCAAGTTTGTC...ACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418576.3
ENST00000456560.6
CDS-3UTR TCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTAACACATCCTGGAGCTaGTCGAAGTGGGTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPNTSWS*SKWVSP
Trigger: GGGCGACACCCACTTCGATCAGCTCCAGGATGTGTT...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCCAACGTCTGTGCCAATaGAGAGGACGTCATAGTGTC +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSQRLCQ*RGRHSV
Trigger: GACACTATGACGTCCTCTTCATTGGCACAGACGTTG...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCAACGTCTGTGCCAATaGAGAGGACGTCATAGTGTC +
Preference number: 4 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSQRLCQ*RGRHSV
Trigger: GACACTATGACGTCCTCTTCATTGGCACAGACGTTG...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCAACGTCTGTGCCAATaGAGAGGACGTCATAGTGTC +
Preference number: 4 (lower is better)
Translates to: ARACRLVSPSAGDPQCARQRLCQ*RGRHSV
Trigger: GACACTATGACGTCCTCTTCATTGGCACAGACGTTG...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCAAATTTGCATGCTGGTaGCAGCGGCCGAGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFKFACW*QRPSPQ
Trigger: TTGAGGACTCGGCCGCTGTCACCAGCATGCAAATTT...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTGGCGCACGTCGTTCATaGTGTACACGCACACCGCAG +
Preference number: 4 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACGARRS*CTRTPQ
Trigger: CTGCGGTGTGCGTGTACAGCATGAACGACGTGCGCC...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTTATGACACCCACTGGTaGATGGGCCCCTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLYDTHW*MGPSLC
Trigger: ACACAAGGAGGGGCCCATGCACCAGTGGGTGTCATA...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTGTGTCCGTCAGCGGCTaGAACCCGGTCCGCGGCAAT +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSVSVSG*NPVRGN
Trigger: ATTGCCGCGGACCGGGTTGCAGCCGCTGACGGACAC...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTCTTGGAAGAAATTTaGATGCTGGTGACAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSLLEEI*MLVTAA
Trigger: GGCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAG...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ACACCGCTAGTAAGGTGCCCAAGACCACATAGCAAGGCCGAGGACTGGGGTTTTTGGGCTGGAAGCGCGTaGACGCGACCCCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: TPLVRCPRPHSKAEDWGFWAGSA*TRPRPR
Trigger: CCTGGGACGGGGTCGCGTGCACGCGCTTCCAGCCCA...AAAACCCCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR GCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTCCATTCCTTACGTCTTaGCGCCGGAACCGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPPFLTS*RRNRLL
Trigger: CAAGAGGCGGTTCCGGCGGCAAGACGTAAGGAATGG...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCCAGAAAGGCGCTGCTaGCCTCCACGCCGAACACCT +
Preference number: 4 (lower is better)
Translates to: APTRPSFQGLSGSSLACRPERRC*PPRRTP
Trigger: AGGTGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGG...ACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGGTTGCGTAAAGCCCTaGTCGACGGCGGCGCACAAG +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLGCVKP*STAAHK
Trigger: CTTGTGCGCCGCCGTCGAGCAGGGCTTTACGCAACC...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTGCCAGTCGTTCGGCCTaGGTAGCACTCAACACGTGC +
Preference number: 4 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACASRSA*VALNTC
Trigger: GCACGTGTTGAGTGCTACGCAGGCCGAACGACTGGC...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTGCCAGTCGTTCGGCCTaGGTAGCACTCAACACGTGC +
Preference number: 4 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAASRSA*VALNTC
Trigger: GCACGTGTTGAGTGCTACGCAGGCCGAACGACTGGC...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTTCGCCTGTCGTCTCCTaGTTGGTTCCCGGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSSPVVS*LVPGVG
Trigger: CCCCACGCCGGGAACCAAGCAGGAGACGACAGGCGA...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTATAAGCCCGCGCAGCTaGCCTCAGCCAGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSISPRS*PQPGPV
Trigger: GACAGGCCCTGGCTGAGGGCAGCTGCGCGGGCTTAT...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCCGCCCTCCCGGGGCTaGTACATTCAAGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAPPSRG*YIQGLS
Trigger: GGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGG...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTCTCGGCCCTGGTCGTTaGTCTGGAGCTCGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSLGPGR*SGARLP
Trigger: GGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAG...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTCAGCTTTCTGCTCACTaGTCACTACCCAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SGARLPRPFPPAESCARPQLSAH*SLPKEV
Trigger: CACCTCCTTGGGTAGTGAGCAGTGAGCAGAAAGCTG...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCCAGCTTTCTGCTCACTaGTCACTACCCAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPQLSAH*SLPKEV
Trigger: CACCTCCTTGGGTAGTGAGCAGTGAGCAGAAAGCTG...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCCTGTTCACAGCTTTCTaGTCACTGCTCACTACCCAA +
Preference number: 4 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPLFTAF*SLLTTQ
Trigger: TTGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAG...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTTAGTACAGTCGGCCTaGCTCGCCCCACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLLVQSA*LAPPPA
Trigger: TGCTGGAGGTGGGGCGAGGCAGGCCGACTGTACTAA...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTACACCGCTAGTAAGGTaGCCAAGACCACATAGCAAG +
Preference number: 4 (lower is better)
Translates to: PGTSSALVVALELGFPVPTPLVR*PRPHSK
Trigger: CTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGT...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR CCA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTAGATGCTGCTGGACGTaGAGAAGACGGCATAGAGCA +
Preference number: 4 (lower is better)
Translates to: SGARLPRPFPPAESCARPRCCWT*RRRHRA
Trigger: TGCTCTATGCCGTCTTCTCCACGTCCAGCAGCATCT...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCAGATGCTGCTGGACGTaGAGAAGACGGCATAGAGCA +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFRCCWT*RRRHRA
Trigger: TGCTCTATGCCGTCTTCTCCACGTCCAGCAGCATCT...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418576.3
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCACACCCACTGGTGCATaGGCCCCTCCTTGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLATPTGA*APPCVQ
Trigger: TTGCACACAAGGAGGGGCCCATGCACCAGTGGGTGT...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCCTGGATGACATCGTCTaGGAAGTCCTTGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSLDDIV*EVLGGT
Trigger: AGTTCCACCAAGGACTTCCCAGACGATGTCATCCAG...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTGGATGACATCGTCTaGGAAGTCCTTGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSLDDIV*EVLGGT
Trigger: AGTTCCACCAAGGACTTCCCAGACGATGTCATCCAG...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCTGGTTCCGCGCAAACTaGATGACATCGTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFWFRAN*MTSSGK
Trigger: CTTCCCAGACGATGTCATCCAGTTTGCGCGGAACCA...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCTGGTTCCGCGCAAACTaGATGACATCGTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPWFRAN*MTSSGK
Trigger: CTTCCCAGACGATGTCATCCAGTTTGCGCGGAACCA...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTACCGCCTCTTGGCACTaGGCTGGAAGCGCGTGCACG +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSTASWH*AGSACT
Trigger: CGTGCACGCGCTTCCAGCCCAGTGCCAAGAGGCGGT...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCCGGAGCACAACGTGCTaGGGTCGCCATTCCTTACGT +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLARSTTC*GRHSLR
Trigger: ACGTAAGGAATGGCGACCCCAGCACGTTGTGCTCCG...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCTTGGTTCCCGGCGTaGGGACAGTCTGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLAWFPA*GQSGHQ
Trigger: CTGGTGACCAGACTGTCCCCACGCCGGGAACCAAGC...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTCCAGGGCCTGTCGGTTaGTGTCTCCATCGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSPGPVG*CLHRPV
Trigger: CACCGGCCGATGGAGACACCAACCGACAGGCCCTGG...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCACCCTGGTCGTTGCTCTaGAGCTCGGCTTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPPWSLL*SSASPS
Trigger: GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGG...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGTCTGTCTCCCAGGGTaGGCACTCCAGGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLVCLPG*ALQAPP
Trigger: AGGAGGTGCCTGGAGTGCCCACCCTGGGAGACAGAC...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCTCGTTCCGGCAGATCTaGCCAACGCGGGACACGGAC +
Preference number: 4 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTSFRQI*PTRDTD
Trigger: GTCCGTGTCCCGCGTTGGCCAGATCTGCCGGAACGA...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCCACACCGCAGAGCCCTaGAAGATGCTGGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLHTAEP*KMLDVE
Trigger: CTCCACGTCCAGCATCTTCCAGGGCTCTGCGGTGTG...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433753.4
ENST00000456560.6
CDS-3UTR CCA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCCAGCGGGAGTCGTGTaGCTCTGTTCGGAGACTTGG +
Preference number: 4 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACPAGVV*LCSETW
Trigger: CCAAGTCTCCGAACAGAGCCACACGACTCCCGCTGG...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCCTGACACCGCTAGTAAGGTGCCCAAGACCACATAGCAAGGCCGAGGACTGGCAGCGGGTGTGTGTGTaGAGGAGCCTTGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ALTPLVRCPRPHSKAEDWQRVCV*RSLELP
Trigger: GGGCAGCTCAAGGCTCCTCCACACACACACCCGCTG...CCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGTCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR TCA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCAGACGCGACCCTGGTATaGCACCCACTGGTGCATGGG +
Preference number: 4 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPDATLV*HPLVHG
Trigger: CCCATGCACCAGTGGGTGTCATACCAGGGTCGCGTC...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTGACGCGACCCTGGTATaGCACCCACTGGTGCATGGG +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSDATLV*HPLVHG
Trigger: CCCATGCACCAGTGGGTGTCATACCAGGGTCGCGTC...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCCCGCGGCAATTTGAGTaGAGGTGTAATTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPPRQFE*RCNWLQ
Trigger: TTGGAGCCAATTACACCTTCACTCAAATTGCCGCGG...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCCAACGTCTGTGCCAATaGAGAGGACGTCATAGTGTC +
Preference number: 4 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPQRLCQ*RGRHSV
Trigger: GACACTATGACGTCCTCTTCATTGGCACAGACGTTG...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCAAACTTGGGCTCATTaGGCCAGCGGGAGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAQTWAH*ASGSRV
Trigger: CACACGACTCCCGCTGGCTCAATGAGCCCAAGTTTG...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTAGGTTCGCTCCAGGCTaGAAGTCTGGAGACCATGCC +
Preference number: 4 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACRFAPG*KSGDHA
Trigger: GGCATGGTCTCCAGACTTTCAGCCTGGAGCGAACCT...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCGGCGCACGTCGTTCATaGTGTACACGCACACCGCAG +
Preference number: 4 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTGARRS*CTRTPQ
Trigger: CTGCGGTGTGCGTGTACAGCATGAACGACGTGCGCC...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTAGGTGCCAAAGGTCTTaGTGGGGCACATGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: APTRPSFQGLSGSSLACRRCQRS*WGTCLA
Trigger: GGCCAGGCATGTGCCCCAGCAAGACCTTTGGCACCT...ACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCTCTTGGAAGAAATTTaGATGCTGGTGACAGCGGCC +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPLLEEI*MLVTAA
Trigger: GGCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAG...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTCTCTTGGAAGAAATTTaGATGCTGGTGACAGCGGCC +
Preference number: 4 (lower is better)
Translates to: SGARLPRPFPPAESCARPLLEEI*MLVTAA
Trigger: GGCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAG...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ACACCGCTAGTAAGGTGCCCAAGACCACATAGCAAGGCCGAGGACTGGGGTTTTTGGGCAGCGCAGCGGTaGAACGCGATCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: TPLVRCPRPHSKAEDWGFWAAQR*NAIWAT
Trigger: GGTGGCCCAGATCGCGTTGCACCGCTGCGCTGCCCA...AAAACCCCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR GCA 90 bp ACCAGGCAACCTTGGACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTGCCCAGAAAGGCGCTGCTaGCCTCCACGCCGAACACCT +
Preference number: 4 (lower is better)
Translates to: TRQPWTGETRALTPLVRCPERRC*PPRRTP
Trigger: AGGTGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGG...GCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGTCCAAGGTTGCCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR GCA 90 bp GCCCTGACACCGCTAGTAAGGTGCCCAAGACCACATAGCAAGGCCGAGGACTGGACTCCAGAAAGGCGCTaGTGCCCTCCACGCCGAACA +
Preference number: 4 (lower is better)
Translates to: ALTPLVRCPRPHSKAEDWTPERR*CPPRRT
Trigger: TGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGGAGT...CCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGTCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR GCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGTAGCACTCAACACGTaGAGCGACAGGCGACGCAGC +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLVALNT*SDRRRS
Trigger: GCTGCGTCGCCTGTCGCTGCACGTGTTGAGTGCTAC...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCGTAGCACTCAACACGTaGAGCGACAGGCGACGCAGC +
Preference number: 4 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTVALNT*SDRRRS
Trigger: GCTGCGTCGCCTGTCGCTGCACGTGTTGAGTGCTAC...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCCAGGCCAACACTGGCTaGCTTCTCACACTCCACCGA +
Preference number: 4 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLQANTG*LLTLHR
Trigger: TCGGTGGAGTGTGAGAAGGCAGCCAGTGTTGGCCTG...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618865.4
CDS-3UTR GCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCAGCTGCCCTGGACTCTaGCCCAGGATCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLSCPGL*PRIWKR
Trigger: CCTCTTCCAGATCCTGGGGCAGAGTCCAGGGCAGCT...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR CCA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATTGGGTCAGCGGGTCCTaGCCTTGCCTCCTGATGCGA +
Preference number: 4 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNWVSGS*PCLLMR
Trigger: TCGCATCAGGAGGCAAGGCCAGGACCCGCTGACCCA...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456560.6
CDS-3UTR CCA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTACACCCACTGGTGCATaGGCCCCTCCTTGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACTPTGA*APPCVQ
Trigger: TTGCACACAAGGAGGGGCCCATGCACCAGTGGGTGT...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTGGTATGACACCCACTaGTGCATGGGCCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLWYDTH*CMGPSL
Trigger: CAAGGAGGGGCCCATGCACCAGTGGGTGTCATACCA...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTTGCCAAAGGTCTTGCTaGGGCACATGCCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSCQRSC*GTCLAA
Trigger: CGCGGCCAGGCATGTGCCCCAGCAAGACCTTTGGCA...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCTGGATGACATCGTCTaGGAAGTCCTTGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPLDDIV*EVLGGT
Trigger: AGTTCCACCAAGGACTTCCCAGACGATGTCATCCAG...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTTGGGCCTACTGCCCTTaGGGACCGAGATCACCTTCA +
Preference number: 4 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACWAYCP*GPRSPS
Trigger: TGAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCA...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATTCCTCTGCCAGCACCTaGGTGTGGGCTGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNSSAST*VWAVTP
Trigger: AGGGGTGACAGCCCACACCCAGGTGCTGGCAGAGGA...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTGGCGTGGGGACAGTCTaGTCACCAGTGCGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSGVGTV*SPVRCA
Trigger: AGCGCAACGCACTGGTGACCAGACTGTCCCCACGCC...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCACTGTCGTCTCCTGCTTaGTTCCCGGCGTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPLSSPA*FPAWGQ
Trigger: CTGTCCCCACGCCGGGAACCAAGCAGGAGACGACAG...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTGTCTGTCTCCCAGGGTaGGCACTCCAGGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSVCLPG*ALQAPP
Trigger: AGGAGGTGCCTGGAGTGCCCACCCTGGGAGACAGAC...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATTCGTTCCGGCAGATCTaGCCAACGCGGGACACGGAC +
Preference number: 4 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNSFRQI*PTRDTD
Trigger: GTCCGTGTCCCGCGTTGGCCAGATCTGCCGGAACGA...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTAGGCAGCCCGATGCCTaGGGTCATAAGGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTARQPDA*GHKDSS
Trigger: GGAAGAGTCCTTATGACCCCAGGCATCGGGCTGCCT...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCCCAGCGGGAGTCGTGTaGCTCTGTTCGGAGACTTGG +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLPAGVV*LCSETW
Trigger: CCAAGTCTCCGAACAGAGCCACACGACTCCCGCTGG...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCGTGAGCCACCGCGCCTaGCCGGAACCACCTTTAATC +
Preference number: 4 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTVSHRA*PEPPLI
Trigger: GATTAAAGGTGGTTCCGGCCAGGCGCGGTGGCTCAC...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR TCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTTCCGCGCAAACTGGATaGCATCGTCTGGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTASAQTG*HRLGSP
Trigger: AGGACTTCCCAGACGATGTCATCCAGTTTGCGCGGA...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTAAATTTGCATGCTGGTaGCAGCGGCCGAGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPKFACW*QRPSPQ
Trigger: TTGAGGACTCGGCCGCTGTCACCAGCATGCAAATTT...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTGGCGCACGTCGTTCATaGTGTACACGCACACCGCAG +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSGARRS*CTRTPQ
Trigger: CTGCGGTGTGCGTGTACAGCATGAACGACGTGCGCC...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCAGGCGCACGTCGTTCATaGTGTACACGCACACCGCAG +
Preference number: 4 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPGARRS*CTRTPQ
Trigger: CTGCGGTGTGCGTGTACAGCATGAACGACGTGCGCC...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTATGACACCCACTGGTaGATGGGCCCCTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLYDTHW*MGPSLC
Trigger: ACACAAGGAGGGGCCCATGCACCAGTGGGTGTCATA...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATAGGTGCCAAAGGTCTTaGTGGGGCACATGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNRCQRS*WGTCLA
Trigger: GGCCAGGCATGTGCCCCAGCAAGACCTTTGGCACCT...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTAGGTGCCAAAGGTCTTaGTGGGGCACATGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSRCQRS*WGTCLA
Trigger: GGCCAGGCATGTGCCCCAGCAAGACCTTTGGCACCT...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATGCCAGTCGTTCGGCCTaGGTAGCACTCAACACGTGC +
Preference number: 4 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNASRSA*VALNTC
Trigger: GCACGTGTTGAGTGCTACGCAGGCCGAACGACTGGC...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTCCGCCCTCCCGGGGCTaGTACATTCAAGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSPPSRG*YIQGLS
Trigger: GGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGG...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCCGCCCTCCCGGGGCTaGTACATTCAAGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSPPSRG*YIQGLS
Trigger: GGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGG...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCTGTTCACAGCTTTCTaGTCACTGCTCACTACCCAA +
Preference number: 4 (lower is better)
Translates to: GGHSRHLLGPGRCSGARLLFTAF*SLLTTQ
Trigger: TTGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAG...AAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATTTAGTACAGTCGGCCTaGCTCGCCCCACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNLVQSA*LAPPPA
Trigger: TGCTGGAGGTGGGGCGAGGCAGGCCGACTGTACTAA...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCAGAGCCCTGGAAGATaGTGGACGTGGAGAAGACGG +
Preference number: 4 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTQSPGR*WTWRRR
Trigger: CCGTCTTCTCCACGTCCAGCATCTTCCAGGGCTCTG...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433753.4
ENST00000456560.6
CDS-3UTR GCA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGGAGACTTGGACGTTaGCCTAGGCTGCGAAAGATG +
Preference number: 4 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACRRLGR*PRLRKM
Trigger: CATCTTTCGCAGCCTAGGGCAACGTCCAAGTCTCCG...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCAGTCCAGTTGGCGCTCTaGGCGGACCGAATCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPVQLAL*ADRIQR
Trigger: CCTTTGGATTCGGTCCGCGCAGAGCGCCAACTGGAC...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456560.6
CDS-3UTR CCA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCCTGGAAGATGCTGCTaGACGTGGAGAAGACGGCAT +
Preference number: 4 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACPGRCC*TWRRRH
Trigger: ATGCCGTCTTCTCCACGTCCAGCAGCATCTTCCAGG...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418576.3
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTTGGTTCCGCGCAAACTaGATGACATCGTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPWFRAN*MTSSGK
Trigger: CTTCCCAGACGATGTCATCCAGTTTGCGCGGAACCA...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTTTGTACATGAGGGGGTaGTTCCGCGCAAACTGGATG +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPLYMRG*FRANWM
Trigger: CATCCAGTTTGCGCGGAACCACCCCCTCATGTACAA...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCTGGGCCTACTGCCCTTaGGGACCGAGATCACCTTCA +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLWAYCP*GPRSPS
Trigger: TGAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCA...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACACAGCTGGTGCCTCTTaGAAGAAATTTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNTAGAS*KKFACW
Trigger: CCAGCATGCAAATTTCTTCCAAGAGGCACCAGCTGT...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCGGAGCACAACGTGCTaGGGTCGCCATTCCTTACGT +
Preference number: 4 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTRSTTC*GRHSLR
Trigger: ACGTAAGGAATGGCGACCCCAGCACGTTGTGCTCCG...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTTTTCAGGGTCTGTCTaGCTCCTCTCTCGCCTGTCG +
Preference number: 4 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLFSGSV*LLSRLS
Trigger: CGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAA...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTGGGCCATTCCAGCTTTaGCTGATAATGCGTTTATTG +
Preference number: 4 (lower is better)
Translates to: GWALQAPPRPWSLLWSSAGPFQL*LIMRLL
Trigger: CAATAAACGCATTATCAGCCAAAGCTGGAATGGCCC...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456560.6
ENST00000616701.5
CDS-3UTR CCA 90 bp ACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTGCCCAAGACCACATAGCGGCTCCTCTGCCCGGTaGCCCACTTCCACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: TGETRALTPLVRCPRPHSGSSAR*PTSTKA
Trigger: TGCCTTTGTGGAAGTGGGCCACCGGGCAGAGGAGCC...GCTATGTGGTCTTGGGCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR CCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCAGGCAGCCCGATGCCTaGGGTCATAAGGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLRQPDA*GHKDSS
Trigger: GGAAGAGTCCTTATGACCCCAGGCATCGGGCTGCCT...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCAGGCCTGGAGCTCTTaGAAGGAGAGCCGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSQAWSS*KESRRR
Trigger: ACGCCTTCGGCTCTCCTTCCAAGAGCTCCAGGCCTG...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp ACCAGGCAACCTTGGACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTGCAGCAAGGCCGAGGACTaGGGTTTTCTGCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: TRQPWTGETRALTPLVRCSKAED*GFLLGP
Trigger: TGGCCCCAGCAGAAAACCCCAGTCCTCGGCCTTGCT...GCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGTCCAAGGTTGCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR TCA 90 bp ACCAGGCAACCTTGGACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTGCAACACATCCTGGAGCTaGTCGAAGTGGGTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: TRQPWTGETRALTPLVRCNTSWS*SKWVSP
Trigger: GGGCGACACCCACTTCGATCAGCTCCAGGATGTGTT...GCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGTCCAAGGTTGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR TCA 90 bp GCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTTCCGCGCAAACTGGATaGCATCGTCTGGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: APTRPSFQGLSGSSLACRSAQTG*HRLGSP
Trigger: AGGACTTCCCAGACGATGTCATCCAGTTTGCGCGGA...ACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCCCGCGGCAATTTGAGTaGAGGTGTAATTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLAPRQFE*RCNWLQ
Trigger: TTGGAGCCAATTACACCTTCACTCAAATTGCCGCGG...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp ACCAGGCAACCTTGGACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTGCAGGTTCGCTCCAGGCTaGAAGTCTGGAGACCATGCC +
Preference number: 4 (lower is better)
Translates to: TRQPWTGETRALTPLVRCRFAPG*KSGDHA
Trigger: GGCATGGTCTCCAGACTTTCAGCCTGGAGCGAACCT...GCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGTCCAAGGTTGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR GCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCTATGACACCCACTGGTaGATGGGCCCCTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLYDTHW*MGPSLC
Trigger: ACACAAGGAGGGGCCCATGCACCAGTGGGTGTCATA...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTCCATTCCTTACGTCTTaGCGCCGGAACCGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSPFLTS*RRNRLL
Trigger: CAAGAGGCGGTTCCGGCGGCAAGACGTAAGGAATGG...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTAGGCCAGCAAATGGGTaGGGTTGTAGGCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: APTRPSFQGLSGSSLACRRPANG*GCRHAA
Trigger: TGCTGCATGCCTACAACCGCACCCATTTGCTGGCCT...ACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ACCAGGCAACCTTGGACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTGCCCTTCCCTGCCCAGTTaGACTCCTCTCGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: TRQPWTGETRALTPLVRCPSLPS*TPLAIP
Trigger: TGGAATGGCGAGAGGAGTGCAACTGGGCAGGGAAGG...GCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGTCCAAGGTTGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR CCA 90 bp ACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTGCCCAAGACCACATAGCCACACCGCAGAGCCCTaGAAGATGCTGCTGGACGTG +
Preference number: 4 (lower is better)
Translates to: TGETRALTPLVRCPRPHSHTAEP*KMLLDV
Trigger: CACGTCCAGCAGCATCTTCCAGGGCTCTGCGGTGTG...GCTATGTGGTCTTGGGCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR CCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTTGGTATGACACCCACTaGTGCATGGGCCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSWYDTH*CMGPSL
Trigger: CAAGGAGGGGCCCATGCACCAGTGGGTGTCATACCA...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTTGGTATGACACCCACTaGTGCATGGGCCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSWYDTH*CMGPSL
Trigger: CAAGGAGGGGCCCATGCACCAGTGGGTGTCATACCA...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCCTGGATGACATCGTCTaGGAAGTCCTTGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLALDDIV*EVLGGT
Trigger: AGTTCCACCAAGGACTTCCCAGACGATGTCATCCAG...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTCTGGATGACATCGTCTaGGAAGTCCTTGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPLDDIV*EVLGGT
Trigger: AGTTCCACCAAGGACTTCCCAGACGATGTCATCCAG...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTTGGTTCCGCGCAAACTaGATGACATCGTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACWFRAN*MTSSGK
Trigger: CTTCCCAGACGATGTCATCCAGTTTGCGCGGAACCA...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTACAGCTGGTGCCTCTTaGAAGAAATTTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLTAGAS*KKFACW
Trigger: CCAGCATGCAAATTTCTTCCAAGAGGCACCAGCTGT...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCTTTTCAGGGTCTGTCTaGCTCCTCTCTCGCCTGTCG +
Preference number: 4 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTFSGSV*LLSRLS
Trigger: CGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAA...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAAGGGCCATTCCAGCTTTaGCTGATAATGCGTTTATTG +
Preference number: 4 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQGPFQL*LIMRLL
Trigger: CAATAAACGCATTATCAGCCAAAGCTGGAATGGCCC...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456560.6
ENST00000616701.5
CDS-3UTR CCA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTGATTTTGTCGTCGTCTaGGTTCTCGCTCTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACDFVVV*VLALRD
Trigger: ATCCCGGAGAGCGAGAACCCAGACGACGACAAAATC...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTAGACCATGCCAGGCCTaGAGCTCTTGGAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSRPCQA*SSWKES
Trigger: GCTCTCCTTCCAAGAGCTCCAGGCCTGGCATGGTCT...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTTCCGCGCAAACTGGATaGCATCGTCTGGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSSAQTG*HRLGSP
Trigger: AGGACTTCCCAGACGATGTCATCCAGTTTGCGCGGA...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCCCGCGGCAATTTGAGTaGAGGTGTAATTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLPRQFE*RCNWLQ
Trigger: TTGGAGCCAATTACACCTTCACTCAAATTGCCGCGG...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp ACCAGGCAACCTTGGACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTGCTATGACACCCACTGGTaGATGGGCCCCTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: TRQPWTGETRALTPLVRCYDTHW*MGPSLC
Trigger: ACACAAGGAGGGGCCCATGCACCAGTGGGTGTCATA...GCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGTCCAAGGTTGCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR GCA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCTCTTGGAAGAAATTTaGATGCTGGTGACAGCGGCC +
Preference number: 4 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTALLEEI*MLVTAA
Trigger: GGCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAG...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCCTGTTCACAGCTTTCTaGTCACTGCTCACTACCCAA +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLALFTAF*SLLTTQ
Trigger: TTGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAG...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCACTTCACGAAGTTCATaGACTCAGTACCAATGTCCT +
Preference number: 4 (lower is better)
Translates to: VALELGFPVPSLRLNPAPTSRSS*TQYQCP
Trigger: AGGACATTGGTACTGAGTGCATGAACTTCGTGAAGT...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCACCTGGAAGATGCTGCTaGACGTGGAGAAGACGGCAT +
Preference number: 4 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPPGRCC*TWRRRH
Trigger: ATGCCGTCTTCTCCACGTCCAGCAGCATCTTCCAGG...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTACAGCTGGTGCCTCTTaGAAGAAATTTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPTAGAS*KKFACW
Trigger: CCAGCATGCAAATTTCTTCCAAGAGGCACCAGCTGT...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTTTTTCAGGGTCTGTCTaGCTCCTCTCTCGCCTGTCG +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSFSGSV*LLSRLS
Trigger: CGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAA...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTTTTTCAGGGTCTGTCTaGCTCCTCTCTCGCCTGTCG +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSFSGSV*LLSRLS
Trigger: CGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAA...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGATTTTGTCGTCGTCTaGGTTCTCGCTCTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLDFVVV*VLALRD
Trigger: ATCCCGGAGAGCGAGAACCCAGACGACGACAAAATC...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGGAAGATGCTGGACGTaGAGAAGACGGCATAGAGCA +
Preference number: 4 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLGRCWT*RRRHRA
Trigger: TGCTCTATGCCGTCTTCTCCACGTCCAGCATCTTCC...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433753.4
ENST00000456560.6
CDS-3UTR CCA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCGGAAGATGCTGGACGTaGAGAAGACGGCATAGAGCA +
Preference number: 4 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTGRCWT*RRRHRA
Trigger: TGCTCTATGCCGTCTTCTCCACGTCCAGCATCTTCC...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433753.4
ENST00000456560.6
CDS-3UTR CCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTTTGAGGGAGGCCACATaGTTCTCGGCACCCACAAAC +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSLREAT*FSAPTN
Trigger: GTTTGTGGGTGCCGAGAACCATGTGGCCTCCCTCAA...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTCAGCTTTCTGCTCACTaGTCACTACCCAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSQLSAH*SLPKEV
Trigger: CACCTCCTTGGGTAGTGAGCAGTGAGCAGAAAGCTG...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATCAGCTTTCTGCTCACTaGTCACTACCCAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNQLSAH*SLPKEV
Trigger: CACCTCCTTGGGTAGTGAGCAGTGAGCAGAAAGCTG...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTTGGTTCCGCGCAAACTaGATGACATCGTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSWFRAN*MTSSGK
Trigger: CTTCCCAGACGATGTCATCCAGTTTGCGCGGAACCA...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATTTGTACATGAGGGGGTaGTTCCGCGCAAACTGGATG +
Preference number: 4 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNLYMRG*FRANWM
Trigger: CATCCAGTTTGCGCGGAACCACCCCCTCATGTACAA...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CCA 90 bp CTGACACCGCTAGTAAGGTGCCCAAGACCACATAGCAAGGCCGAGGACTGGGGTTTGTACATGAGGGGGTaGTTCCGCGCAAACTGGATG +
Preference number: 4 (lower is better)
Translates to: LTPLVRCPRPHSKAEDWGLYMRG*FRANWM
Trigger: CATCCAGTTTGCGCGGAACCACCCCCTCATGTACAA...ACCCCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR CCA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCACAGCTGGTGCCTCTTaGAAGAAATTTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLTAGAS*KKFACW
Trigger: CCAGCATGCAAATTTCTTCCAAGAGGCACCAGCTGT...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR TCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCCGCGGCAATTTGAGTaGAGGTGTAATTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSPRQFE*RCNWLQ
Trigger: TTGGAGCCAATTACACCTTCACTCAAATTGCCGCGG...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTCTCTTGGAAGAAATTTaGATGCTGGTGACAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSLLEEI*MLVTAA
Trigger: GGCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAG...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCACTTCACGAAGTTCATaGACTCAGTACCAATGTCCT +
Preference number: 4 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLATSRSS*TQYQCP
Trigger: AGGACATTGGTACTGAGTGCATGAACTTCGTGAAGT...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTCTGTTCACAGCTTTCTaGTCACTGCTCACTACCCAA +
Preference number: 4 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSLFTAF*SLLTTQ
Trigger: TTGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAG...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR GCA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTACTTCACGAAGTTCATaGACTCAGTACCAATGTCCT +
Preference number: 4 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSTSRSS*TQYQCP
Trigger: AGGACATTGGTACTGAGTGCATGAACTTCGTGAAGT...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS GCA 90 bp GGCGCCGCAGCCTGCGCAGCAGTAGTCCCCGGGCGGTGCGCTCGGTaGGCTCCTCTGCCAGCACCTGCGGGCAGAGGGCAGCGTGAGGCG +
Preference number: 5 (lower is better)
Translates to: GAAACAAVVPGRCAR*APLPAPAGRGQREA
Trigger: CGCCTCACGCTGCCCTCTGCCCGCAGGTGCTGGCAGAGGAGCGCACCGAGCGCACCGCCCGGGGACTACTGCTGCGCAGGCTGCGGCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS GCA 90 bp CCGAGTCCCGGCGCCGCAGCCTGCGCAGCAGTAGTCCCCGGGCGGTaGGCTCGGTGCGCTCCTCTGCCAGCACCTGCGGGCAGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: PSPGAAACAAVVPGR*ARCAPLPAPAGRGQ
Trigger: CTGCCCTCTGCCCGCAGGTGCTGGCAGAGGAGCGCACCGAGCGCACCGCCCGGGGACTACTGCTGCGCAGGCTGCGGCGCCGGGACTCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS CCA 90 bp CTCCGCCCGGCTCCACCAGCTGCAGAAAGTCCCGGTACCAGAGTTTaGGGCCCGGCGGCGCGGCGGGCGCAGCCTCCTCGGCCCGCGCCA +
Preference number: 5 (lower is better)
Translates to: LRPAPPAAESPGTRV*GPAARRAQPPRPAP
Trigger: TGGCGCGGGCCGAGGAGGCTGCGCCCGCCGCGCCGCCGGGCCCCAAACTCTGGTACCGGGACTTTCTGCAGCTGGTGGAGCCGGGCGGAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS TCA 90 bp CGCTCGGTGCGCTCCTCTGCCAGCACCTGCGGGCAGAGGGCAGCGTaGGGCGGGGGTGTCGGGCCGGGAACAGGGCTTCCGGGCCCTAGC +
Preference number: 5 (lower is better)
Translates to: RSVRSSASTCGQRAA*GGGVGPGTGLPGPS
Trigger: GCTAGGGCCCGGAAGCCCTGTTCCCGGCCCGACACCCCCGCCTCACGCTGCCCTCTGCCCGCAGGTGCTGGCAGAGGAGCGCACCGAGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS GCA 90 bp CGACGGCGGCGCACAAGTACACGCCCGAGTCCCGGCGCCGCAGCCTaGGCAGCAGTAGTCCCCGGGCGGTGCGCTCGGTGCGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: RRRRTSTRPSPGAAA*AAVVPGRCARCAPL
Trigger: CAGAGGAGCGCACCGAGCGCACCGCCCGGGGACTACTGCTGCGCAGGCTGCGGCGCCGGGACTCGGGCGTGTACTTGTGCGCCGCCGTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 90 bp GCAGGGTCGCCGGGTGTGGCCCAGGGACTCCTCACCCGGCAGATCTaGCCAACGCGGGACACGGACAGGCGTCCCAGTGCCGGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: AGSPGVAQGLLTRQI*PTRDTDRRPSAGAA
Trigger: GGCGGCGCCGGCACTGGGACGCCTGTCCGTGTCCCGCGTTGGCCAGATCTGCCGGGTGAGGAGTCCCTGGGCCACACCCGGCGACCCTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS GCA 90 bp CCGAGTCCCGGCGCCGCAGCCTGCGCAGCAGTAGTCCCCGGGCGGTaGGCTCGGTGCGCTCCTCTGCCAGCACCTGGGTGTGGGCTGTCA +
Preference number: 5 (lower is better)
Translates to: PSPGAAACAAVVPGR*ARCAPLPAPGCGLS
Trigger: TGACAGCCCACACCCAGGTGCTGGCAGAGGAGCGCACCGAGCGCACCGCCCGGGGACTACTGCTGCGCAGGCTGCGGCGCCGGGACTCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 90 bp GGCGCGGCGGGCGCAGCCTCCTCGGCCCGCGCCAGTCGTTCGGCCTaGGTAGCACTCAACACGTGCAGCGACAGGCGACGCAGCGGTTGC +
Preference number: 5 (lower is better)
Translates to: GAAGAASSARASRSA*VALNTCSDRRRSGC
Trigger: GCAACCGCTGCGTCGCCTGTCGCTGCACGTGTTGAGTGCTACGCAGGCCGAACGACTGGCGCGGGCCGAGGAGGCTGCGCCCGCCGCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS-3UTR CAA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCTCCCGGTACCAGAGTTaGGGGCCCGGCGGCGCGGCG +
Preference number: 5 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPSRYQS*GPGGAA
Trigger: CGCCGCGCCGCCGGGCCCCAAACTCTGGTACCGGGA...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS GCA 90 bp GCGACTCCAGGGGCAGTGACTGCAGCGCAGGCTGCGGGCGGCACATaGGCAGGGAGTTCGCGCTGCCACCTCCGCCCGGCTCCACCAGCT +
Preference number: 5 (lower is better)
Translates to: ATPGAVTAAQAAGGT*AGSSRCHLRPAPPA
Trigger: AGCTGGTGGAGCCGGGCGGAGGTGGCAGCGCGAACTCCCTGCGCATGTGCCGCCCGCAGCCTGCGCTGCAGTCACTGCCCCTGGAGTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS-3UTR CAA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCTCCCGGTACCAGAGTTaGGGGCCCGGCGGCGCGGCG +
Preference number: 5 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSSRYQS*GPGGAA
Trigger: CGCCGCGCCGCCGGGCCCCAAACTCTGGTACCGGGA...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCCTGGTCACCAGTGCGTaGCGCTGCGCGGCCCCCGCT +
Preference number: 5 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPLVTSA*RCAAPA
Trigger: AGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCAG...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS GCA 90 bp CGGGGAGGGCGGAGTAAGGCTCACCTGGGTGTGGGCTGTCACCCCTaGGCGCTGGAAAGTCCACTCCACGCGCGCCTGCAGCGAGCGGGG +
Preference number: 5 (lower is better)
Translates to: RGGRSKAHLGVGCHP*ALESPLHARLQRAG
Trigger: CCCCGCTCGCTGCAGGCGCGCGTGGAGTGGACTTTCCAGCGCGCAGGGGTGACAGCCCACACCCAGGTGAGCCTTACTCCGCCCTCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS-3UTR CAA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCCGCCGGAACCGCCTCTaGGCACTGGGCTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRRRNRL*ALGWKR
Trigger: GCGCTTCCAGCCCAGTGCCAAGAGGCGGTTCCGGCG...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCCTGGTCACCAGTGCGTaGCGCTGCGCGGCCCCCGCT +
Preference number: 5 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSLVTSA*RCAAPA
Trigger: AGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCAG...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS GCA 90 bp GCCAGACAGCATTCGGTGCAGACGCGGCCGTGGGCAGCGCAGCGGTaGAACGCGATCTGGGCCACCGCGCTCCGCGAGGCTACGTACAGC +
Preference number: 5 (lower is better)
Translates to: ARQHSVQTRPWAAQR*NAIWATALREATYS
Trigger: GCTGTACGTAGCCTCGCGGAGCGCGGTGGCCCAGATCGCGTTGCACCGCTGCGCTGCCCACGGCCGCGTCTGCACCGAATGCTGTCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 90 bp TCGGTGCAGACGCGGCCGTGGGCAGCGCAGCGGTGCAACGCGATCTaGGCCACCGCGCTCCGCGAGGCTACGTACAGCTGGTGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SVQTRPWAAQRCNAI*ATALREATYSWCLL
Trigger: CAAGAGGCACCAGCTGTACGTAGCCTCGCGGAGCGCGGTGGCCCAGATCGCGTTGCACCGCTGCGCTGCCCACGGCCGCGTCTGCACCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 90 bp CGCTCCTCTGCCAGCACCTGGGTGTGGGCTGTCACCCCTGCGCGCTaGAAAGTCCACTCCACGCGCGCCTGCAGCGAGCGGGGCTCACAC +
Preference number: 5 (lower is better)
Translates to: RSSASTWVWAVTPAR*KVHSTRACSERGSH
Trigger: GTGTGAGCCCCGCTCGCTGCAGGCGCGCGTGGAGTGGACTTTCCAGCGCGCAGGGGTGACAGCCCACACCCAGGTGCTGGCAGAGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 90 bp CTCTCGCCTGTCGTCTCCTGCTTGGTTCCCGGCGTGGGGACAGTCTaGTCACCAGTGCGTTGCGCTGCGCGGCCCCCGCTCAGCGCGAGG +
Preference number: 5 (lower is better)
Translates to: LSPVVSCLVPGVGTV*SPVRCAARPPLSAR
Trigger: CCTCGCGCTGAGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCAGACTGTCCCCACGCCGGGAACCAAGCAGGAGACGACAGGCGAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 90 bp GGACAGGAGCCTGGCGGGGAGGGCGGAGTAAGGCTCACCTGGGTGTaGGCTGTCACCCCTGCGCGCTGGAAAGTCCACTCCACGCGCGCC +
Preference number: 5 (lower is better)
Translates to: GQEPGGEGGVRLTWV*AVTPARWKVHSTRA
Trigger: GGCGCGCGTGGAGTGGACTTTCCAGCGCGCAGGGGTGACAGCCCACACCCAGGTGAGCCTTACTCCGCCCTCCCCGCCAGGCTCCTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS-3UTR CAA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACTGGTCACCAGTGCGTaGCGCTGCGCGGCCCCCGCT +
Preference number: 5 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQLVTSA*RCAAPA
Trigger: AGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCAG...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCCCTCGGCCCTGGTCGTaGCTCTGGAGCTCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRPRPWS*LWSSAS
Trigger: GGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGG...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS TCA 90 bp GACCGCGGCAGGAGGCATGGGTCAGCGGGTCCTGGCCTTGCCTCCTaGTGCGAGACCCACGCGCTGCTTCCCCTTCCCGTAGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: DRGRRHGSAGPGLAS*CETHALLPLPVVRA
Trigger: TGCCCGCACTACGGGAAGGGGAAGCAGCGCGTGGGTCTCGCATCAGGAGGCAAGGCCAGGACCCGCTGACCCATGCCTCCTGCCGCGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000434030.1
ENST00000439487.5
ENST00000456210.5
ENST00000456560.6
CDS GCA 90 bp CGCGCGCCTGCAGCGAGCGGGGCTCACACTCCAGAAAGGCGCTGCTaGCCTCCACGCCGAACACCTTGTGTTCCAGCAGCGCGGGACGAG +
Preference number: 5 (lower is better)
Translates to: RAPAASGAHTPERRC*PPRRTPCVPAARDE
Trigger: CTCGTCCCGCGCTGCTGGAACACAAGGTGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGGAGTGTGAGCCCCGCTCGCTGCAGGCGCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 90 bp CCACGCGCGCCTGCAGCGAGCGGGGCTCACACTCCAGAAAGGCGCTaGTGCCCTCCACGCCGAACACCTTGTGTTCCAGCAGCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: PRAPAASGAHTPERR*CPPRRTPCVPAARD
Trigger: GTCCCGCGCTGCTGGAACACAAGGTGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGGAGTGTGAGCCCCGCTCGCTGCAGGCGCGCGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 90 bp TGGGCTGTCACCCCTGCGCGCTGGAAAGTCCACTCCACGCGCGCCTaGAGCGAGCGGGGCTCACACTCCAGAAAGGCGCTGCTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: WAVTPARWKVHSTRA*SERGSHSRKALLPS
Trigger: GGAGGGCAGCAGCGCCTTTCTGGAGTGTGAGCCCCGCTCGCTGCAGGCGCGCGTGGAGTGGACTTTCCAGCGCGCAGGGGTGACAGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 90 bp CTCAACACGTGCAGCGACAGGCGACGCAGCGGTTGCGTAAAGCCCTaGTCGACGGCGGCGCACAAGTACACGCCCGAGTCCCGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: LNTCSDRRRSGCVKP*STAAHKYTPESRRR
Trigger: GCGGCGCCGGGACTCGGGCGTGTACTTGTGCGCCGCCGTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCTGTCGCTGCACGTGTTGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 90 bp GTCCTCCGGTTACGGCCCTTTCTCCGCGACTCCAGGGGCAGTGACTaGAGCGCAGGCTGCGGGCGGCACATGCGCAGGGAGTTCGCGCTG +
Preference number: 5 (lower is better)
Translates to: VLRLRPFLRDSRGSD*SAGCGRHMRREFAL
Trigger: CAGCGCGAACTCCCTGCGCATGTGCCGCCCGCAGCCTGCGCTGCAGTCACTGCCCCTGGAGTCGCGGAGAAAGGGCCGTAACCGGAGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 90 bp GGCGGAGTAAGGCTCACCTGGGTGTGGGCTGTCACCCCTGCGCGCTaGAAAGTCCACTCCACGCGCGCCTGCAGCGAGCGGGGCTCACAC +
Preference number: 5 (lower is better)
Translates to: GGVRLTWVWAVTPAR*KVHSTRACSERGSH
Trigger: GTGTGAGCCCCGCTCGCTGCAGGCGCGCGTGGAGTGGACTTTCCAGCGCGCAGGGGTGACAGCCCACACCCAGGTGAGCCTTACTCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS-3UTR CAA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTCAGCGGGTCCTGGCCTaGCCTCCTGATGCGAGACCC +
Preference number: 5 (lower is better)
Translates to: PGTSSALVVALELGFPVPQRVLA*PPDARP
Trigger: GGGTCTCGCATCAGGAGGCAAGGCCAGGACCCGCTG...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456560.6
CDS-3UTR CAA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTCGCCGGAACCGCCTCTaGGCACTGGGCTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: SGARLPRPFPPAESCARPRRNRL*ALGWKR
Trigger: GCGCTTCCAGCCCAGTGCCAAGAGGCGGTTCCGGCG...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCTGGTCACCAGTGCGTaGCGCTGCGCGGCCCCCGCT +
Preference number: 5 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLLVTSA*RCAAPA
Trigger: AGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCAG...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCCCTGTCGTCTCCTGCTaGGTTCCCGGCGTGGGGACA +
Preference number: 5 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRPVVSC*VPGVGT
Trigger: TGTCCCCACGCCGGGAACCAAGCAGGAGACGACAGG...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCCCTGTCGTCTCCTGCTaGGTTCCCGGCGTGGGGACA +
Preference number: 5 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPPVVSC*VPGVGT
Trigger: TGTCCCCACGCCGGGAACCAAGCAGGAGACGACAGG...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTCCTCGGCCCTGGTCGTaGCTCTGGAGCTCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: PGTSSALVVALELGFPVPPRPWS*LWSSAS
Trigger: GGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGG...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS GCA 90 bp GATCACGGCGGCAGCCCCGGCCCGCCCCATCTCAGCAGCTCAGGGTaGTCAGGGTTCAGCGGGTGTGTGTGTGGAGGAGCCTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: DHGGSPGPPHLSSSG*SGFSGCVCGGALSC
Trigger: GCAGCTCAAGGCTCCTCCACACACACACCCGCTGAACCCTGAGCACCCTGAGCTGCTGAGATGGGGCGGGCCGGGGCTGCCGCCGTGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000433753.4
ENST00000612509.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
ENST00000621029.4
CDS CCA 90 bp CGAGGGTGCCCCGCCTGGCCACAATCACAGACACACCCACGCCACTaGGCACACCCTCAGGGTCACCCTGCACTGGCAAGCCCGCCTCAC +
Preference number: 5 (lower is better)
Translates to: RGCPAWPQSQTHPRH*AHPQGHPALASPPH
Trigger: GTGAGGCGGGCTTGCCAGTGCAGGGTGACCCTGAGGGTGTGCCCAGTGGCGTGGGTGTGTCTGTGATTGTGGCCAGGCGGGGCACCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619119.4
CDS-3UTR CAA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCCTGGTCACCAGTGCGTaGCGCTGCGCGGCCCCCGCT +
Preference number: 5 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLALVTSA*RCAAPA
Trigger: AGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCAG...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCGCCAGGGCCTGTCGGTaGGTGTCTCCATCGGCCGGT +
Preference number: 5 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFARACR*VSPSAG
Trigger: ACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCTCGGCCCTGGTCGTaGCTCTGGAGCTCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPPRPWS*LWSSAS
Trigger: GGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGG...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCCAGGCCTGGAGCTCTaGGAAGGAGAGCCGAAGGCG +
Preference number: 5 (lower is better)
Translates to: ALELGFPVPSLRLNPAPDPGLEL*EGEPKA
Trigger: CGCCTTCGGCTCTCCTTCCAAGAGCTCCAGGCCTGG...GTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCGCCCGCTTGCTGATGTaGTCCAGGTTGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRARLLM*SRLREA
Trigger: GGCCTCCCTCAACCTGGACAACATCAGCAAGCGGGC...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS GCA 90 bp TCCTCGGCCCGCGCCAGTCGTTCGGCCTGCGTAGCACTCAACACGTaGAGCGACAGGCGACGCAGCGGTTGCGTAAAGCCCTGCTCGACG +
Preference number: 5 (lower is better)
Translates to: SSARASRSACVALNT*SDRRRSGCVKPCST
Trigger: CGTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCTGTCGCTGCACGTGTTGAGTGCTACGCAGGCCGAACGACTGGCGCGGGCCGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 90 bp GCCGCGGGTAGGGGACGCGACCCTGGTATGACACCCACTGGTGCATaGGCCCCTCCTTGTGTGCAAAGGGTCCCAAGAAGGCCCGGCGCA +
Preference number: 5 (lower is better)
Translates to: AAGRGRDPGMTPTGA*APPCVQRVPRRPGA
Trigger: TGCGCCGGGCCTTCTTGGGACCCTTTGCACACAAGGAGGGGCCCATGCACCAGTGGGTGTCATACCAGGGTCGCGTCCCCTACCCGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000434030.1
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS-3UTR CAA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAAGGTGCCAAAGGTCTaGCTGGGGCACATGCCTGGC +
Preference number: 5 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPKVPKV*LGHMPG
Trigger: GCCAGGCATGTGCCCCAGCAAGACCTTTGGCACCTT...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCCGCCGGAACCGCCTCTaGGCACTGGGCTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLARRNRL*ALGWKR
Trigger: GCGCTTCCAGCCCAGTGCCAAGAGGCGGTTCCGGCG...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTCGCCGGAACCGCCTCTaGGCACTGGGCTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPRRNRL*ALGWKR
Trigger: GCGCTTCCAGCCCAGTGCCAAGAGGCGGTTCCGGCG...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCGCCATTCCTTACGTCTaGCCGCCGGAACCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPAIPYV*PPEPPL
Trigger: AAGAGGCGGTTCCGGCGGCAAGACGTAAGGAATGGC...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCTCCACGCCGAACACCTaGTGTTCCAGCAGCGCGGGA +
Preference number: 5 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSSTPNT*CSSSAG
Trigger: TCCCGCGCTGCTGGAACACAAGGTGTTCGGCGTGGA...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCAGGCGACGCAGCGGTaGCGTAAAGCCCTGCTCGAC +
Preference number: 5 (lower is better)
Translates to: GGHSRHLLGPGRCSGARLQATQR*RKALLD
Trigger: GTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCTG...AAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCCAGGCGACGCAGCGGTaGCGTAAAGCCCTGCTCGAC +
Preference number: 5 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPQATQR*RKALLD
Trigger: GTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCTG...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTTCCCGGTACCAGAGTTaGGGGCCCGGCGGCGCGGCG +
Preference number: 5 (lower is better)
Translates to: APTRPSFQGLSGSSLACRSRYQS*GPGGAA
Trigger: CGCCGCGCCGCCGGGCCCCAAACTCTGGTACCGGGA...ACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCTGTCGTCTCCTGCTaGGTTCCCGGCGTGGGGACA +
Preference number: 5 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNPVVSC*VPGVGT
Trigger: TGTCCCCACGCCGGGAACCAAGCAGGAGACGACAGG...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCCTGTCGTCTCCTGCTaGGTTCCCGGCGTGGGGACA +
Preference number: 5 (lower is better)
Translates to: TSSALVVALELGFPVPSLPVVSC*VPGVGT
Trigger: TGTCCCCACGCCGGGAACCAAGCAGGAGACGACAGG...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCCCAGGCCTGGAGCTCTaGGAAGGAGAGCCGAAGGCG +
Preference number: 5 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFPGLEL*EGEPKA
Trigger: CGCCTTCGGCTCTCCTTCCAAGAGCTCCAGGCCTGG...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCGGCCAGGCCAGCTTCTaGGCCCGCTTGCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSGQASF*ARLLML
Trigger: CAACATCAGCAAGCGGGCCAAGAAGCTGGCCTGGCC...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS GCA 90 bp GCCTGCGTAGCACTCAACACGTGCAGCGACAGGCGACGCAGCGGTTaGGTAAAGCCCTGCTCGACGGCGGCGCACAAGTACACGCCCGAG +
Preference number: 5 (lower is better)
Translates to: ACVALNTCSDRRRSG*VKPCSTAAHKYTPE
Trigger: CTCGGGCGTGTACTTGTGCGCCGCCGTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCTGTCGCTGCACGTGTTGAGTGCTACGCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 90 bp GCAGCTCCTCCAGGAGCAGCCCCTCTGCGCTGGGCCTACTGCCCTTaGGGACCGAGATCACCTTCAGCACCGTGCCAACGTCTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: AAPPGAAPLRWAYCP*GPRSPSAPCQRLQG
Trigger: TCCCTGCAGACGTTGGCACGGTGCTGAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCAGCGCAGAGGGGCTGCTCCTGGAGGAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS-3UTR CAA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACTGGGCCTACTGCCCTaGGGGACCGAGATCACCTTC +
Preference number: 5 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQLGLLP*GTEITF
Trigger: GAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCAG...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCCTGGGCCTACTGCCCTaGGGGACCGAGATCACCTTC +
Preference number: 5 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFLGLLP*GTEITF
Trigger: GAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCAG...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCTGGGCCTACTGCCCTaGGGGACCGAGATCACCTTC +
Preference number: 5 (lower is better)
Translates to: TSSALVVALELGFPVPSLLGLLP*GTEITF
Trigger: GAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCAG...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCCGCCGGAACCGCCTCTaGGCACTGGGCTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLRRNRL*ALGWKR
Trigger: GCGCTTCCAGCCCAGTGCCAAGAGGCGGTTCCGGCG...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCTCCACGCCGAACACCTaGTGTTCCAGCAGCGCGGGA +
Preference number: 5 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPSTPNT*CSSSAG
Trigger: TCCCGCGCTGCTGGAACACAAGGTGTTCGGCGTGGA...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCATCCCGGTACCAGAGTTaGGGGCCCGGCGGCGCGGCG +
Preference number: 5 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPSRYQS*GPGGAA
Trigger: CGCCGCGCCGCCGGGCCCCAAACTCTGGTACCGGGA...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTCCTCGGCCCTGGTCGTaGCTCTGGAGCTCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPPRPWS*LWSSAS
Trigger: GGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGG...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTGCCCGCTTGCTGATGTaGTCCAGGTTGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPARLLM*SRLREA
Trigger: GGCCTCCCTCAACCTGGACAACATCAGCAAGCGGGC...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGGCCAGGCCAGCTTCTaGGCCCGCTTGCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: VALELGFPVPSLRLNPAPGQASF*ARLLML
Trigger: CAACATCAGCAAGCGGGCCAAGAAGCTGGCCTGGCC...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS TCA 90 bp GCTACGAACCATGCCTGGCCGCGGGTAGGGGACGCGACCCTGGTATaGCACCCACTGGTGCATGGGCCCCTCCTTGTGTGCAAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: ATNHAWPRVGDATLV*HPLVHGPLLVCKGS
Trigger: GGACCCTTTGCACACAAGGAGGGGCCCATGCACCAGTGGGTGTCATACCAGGGTCGCGTCCCCTACCCGCGGCCAGGCATGGTTCGTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419007.5
ENST00000434030.1
CDS TCA 90 bp GTGGTCAGGGACCTTAATGGGAGGGTCGAGGGCGGGTCTTCTCCTTaGTTCAGGGGAGGCGGGTCGGGAGCCCCGTTGGACGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: VVRDLNGRVEGGSSP*FRGGGSGAPLDAMG
Trigger: CCCCATTGCGTCCAACGGGGCTCCCGACCCGCCTCCCCTGAATCAAGGAGAAGACCCGCCCTCGACCCTCCCATTAAGGTCCCTGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS CCA 90 bp GCAGCTCCTCCAGGAGCAGCCCCTCTGCGCTGGGCCTACTGCCCTTaGGGACCGAGATCACCTTCAGCACCGTGCCAACGTCTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: AAPPGAAPLRWAYCP*GPRSPSAPCQRLCQ
Trigger: TTGGCACAGACGTTGGCACGGTGCTGAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCAGCGCAGAGGGGCTGCTCCTGGAGGAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS-3UTR CAA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCCAGCGGGTCCTGGCCTaGCCTCCTGATGCGAGACCC +
Preference number: 5 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLQRVLA*PPDARP
Trigger: GGGTCTCGCATCAGGAGGCAAGGCCAGGACCCGCTG...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418576.3
ENST00000456560.6
CDS-3UTR CAA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCTGCATGGGCCCCTCCTaGTGTGCAAAGGGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: VALELGFPVPSLRLNPAPCMGPS*CAKGPK
Trigger: CTTGGGACCCTTTGCACACAAGGAGGGGCCCATGCA...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCAAGGTGCCAAAGGTCTaGCTGGGGCACATGCCTGGC +
Preference number: 5 (lower is better)
Translates to: TSSALVVALELGFPVPSLKVPKV*LGHMPG
Trigger: GCCAGGCATGTGCCCCAGCAAGACCTTTGGCACCTT...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTAAGGTGCCAAAGGTCTaGCTGGGGCACATGCCTGGC +
Preference number: 5 (lower is better)
Translates to: SGARLPRPFPPAESCARPKVPKV*LGHMPG
Trigger: GCCAGGCATGTGCCCCAGCAAGACCTTTGGCACCTT...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCTCGTCTGGGAAGTCCTaGGTGGAACTGAAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPSSGKS*VELKVP
Trigger: TGGCACCTTCAGTTCCACCAAGGACTTCCCAGACGA...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGGTGGGCAGGACAGAGTaGTACATGAGGGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: ARACRLVSPSAGDPQCARVGRTE*YMRGWF
Trigger: GAACCACCCCCTCATGTACAACTCTGTCCTGCCCAC...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTGCCATTCCTTACGTCTaGCCGCCGGAACCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: HLLGPGRCSGARLPRPFPAIPYV*PPEPPL
Trigger: AAGAGGCGGTTCCGGCGGCAAGACGTAAGGAATGGC...AGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTGCCAGGGCCTGTCGGTaGGTGTCTCCATCGGCCGGT +
Preference number: 5 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAARACR*VSPSAG
Trigger: ACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGCTCTGTTCGGAGACTaGGACGTTGCCCTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: SGARLPRPFPPAESCARPALFGD*DVALGC
Trigger: GCAGCCTAGGGCAACGTCCAAGTCTCCGAACAGAGC...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCGCTCTGTTCGGAGACTaGGACGTTGCCCTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: TSSALVVALELGFPVPSLALFGD*DVALGC
Trigger: GCAGCCTAGGGCAACGTCCAAGTCTCCGAACAGAGC...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAGCTTCTTGGCCCGCTaGCTGATGTTGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: GPVGWCLHRPVTPNVPGPSFLAR*LMLSRL
Trigger: CAACCTGGACAACATCAGCAAGCGGGCCAAGAAGCT...GGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCAGCTTCTTGGCCCGCTaGCTGATGTTGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRSFLAR*LMLSRL
Trigger: CAACCTGGACAACATCAGCAAGCGGGCCAAGAAGCT...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCCCTCACCAGGCAACCTaGGACAGGAGAAACTCGGGC +
Preference number: 5 (lower is better)
Translates to: VALELGFPVPSLRLNPAPPHQAT*DRRNSG
Trigger: GCCCGAGTTTCTCCTGTCCAAGGTTGCCTGGTGAGG...GGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR CAA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCGAGATCTAGGCTCATaGCAACCTCCACCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: ARACRLVSPSAGDPQCARRDLGS*QPPPPR
Trigger: CCTGGGAGGTGGAGGTTGCAATGAGCCTAGATCTCG...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS CCA 90 bp CTCCTTGATTCAGGGGAGGCGGGTCGGGAGCCCCGTTGGACGCAATaGGGCCTCAGCAGCTTGTGGAGTGCAGGTGAGGGACCAAACTGG +
Preference number: 5 (lower is better)
Translates to: LLDSGEAGREPRWTQ*GLSSLWSAGEGPNW
Trigger: CCAGTTTGGTCCCTCACCTGCACTCCACAAGCTGCTGAGGCCCCATTGCGTCCAACGGGGCTCCCGACCCGCCTCCCCTGAATCAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS CCA 90 bp CTTCGGCATCAGCCCAGGCAAGTACTAACATGGGCTACAGGGACCTaGGGGCCCTTGCTGACCAGCCCAGGCCTCACGAGGGTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: LRHQPRQVLTWATGT*GPLLTSPGLTRVGV
Trigger: GACACCCACCCTCGTGAGGCCTGGGCTGGTCAGCAAGGGCCCCCAGGTCCCTGTAGCCCATGTTAGTACTTGCCTGGGCTGATGCCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441915.5
CDS-3UTR CAA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTAAGGTGCCAAAGGTCTaGCTGGGGCACATGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLKVPKV*LGHMPG
Trigger: GCCAGGCATGTGCCCCAGCAAGACCTTTGGCACCTT...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCGTCTGGGAAGTCCTaGGTGGAACTGAAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: PGTSSALVVALELGFPVPSSGKS*VELKVP
Trigger: TGGCACCTTCAGTTCCACCAAGGACTTCCCAGACGA...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTCGTCTGGGAAGTCCTaGGTGGAACTGAAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSSSGKS*VELKVP
Trigger: TGGCACCTTCAGTTCCACCAAGGACTTCCCAGACGA...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GGGTGGGCACTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTCCGGTCCGCGGCAATTaGAGTGAAGGTGTAATTGGC +
Preference number: 5 (lower is better)
Translates to: GWALQAPPRPWSLLWSSAPVRGN*SEGVIG
Trigger: GCCAATTACACCTTCACTCAAATTGCCGCGGACCGG...AGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAGTGCCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCCAGGCGACGCAGCGGTaGCGTAAAGCCCTGCTCGAC +
Preference number: 5 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLQATQR*RKALLD
Trigger: GTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCTG...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCTGATGTTGTCCAGGTaGAGGGAGGCCACATGGTTC +
Preference number: 5 (lower is better)
Translates to: ARACRLVSPSAGDPQCARLMLSR*REATWF
Trigger: GAACCATGTGGCCTCCCTCAACCTGGACAACATCAG...CCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTTCGTTCTTGACAAACTaGGGCTCTGACCGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLSFLTN*GSDRGR
Trigger: CCTGCCGCGGTCAGAGCCCAAGTTTGTCAAGAACGA...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418576.3
CDS-3UTR CAA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGCATGGGCCCCTCCTaGTGTGCAAAGGGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLACMGPS*CAKGPK
Trigger: CTTGGGACCCTTTGCACACAAGGAGGGGCCCATGCA...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTTCGTCTGGGAAGTCCTaGGTGGAACTGAAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: SGARLPRPFPPAESCARPSSGKS*VELKVP
Trigger: TGGCACCTTCAGTTCCACCAAGGACTTCCCAGACGA...AGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTGTGGGCAGGACAGAGTaGTACATGAGGGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLVGRTE*YMRGWF
Trigger: GAACCACCCCCTCATGTACAACTCTGTCCTGCCCAC...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTCCTCTTGGAAGAAATTaGCATGCTGGTGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: PGTSSALVVALELGFPVPPLGRN*HAGDSG
Trigger: GCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAGG...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCCCTCTTGGAAGAAATTaGCATGCTGGTGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: GWCLHRPVTPNVPGPNPSPLGRN*HAGDSG
Trigger: GCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAGG...GGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCGCCATTCCTTACGTCTaGCCGCCGGAACCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLAAIPYV*PPEPPL
Trigger: AAGAGGCGGTTCCGGCGGCAAGACGTAAGGAATGGC...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATGCCAGGGCCTGTCGGTaGGTGTCTCCATCGGCCGGT +
Preference number: 5 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNARACR*VSPSAG
Trigger: ACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTGCCAGGGCCTGTCGGTaGGTGTCTCCATCGGCCGGT +
Preference number: 5 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSARACR*VSPSAG
Trigger: ACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCAATACCTTGACAAACTaGGGCTCTGACCGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPNTLTN*GSDRGR
Trigger: CCTGCCGCGGTCAGAGCCCAAGTTTGTCAAGGTATT...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456560.6
CDS-3UTR CAA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCCACAAAGGCACAGGTaGGGTGGAAGGCTCCCGTGC +
Preference number: 5 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAPQRHR*GGRLPC
Trigger: GCACGGGAGCCTTCCACCCAACCTGTGCCTTTGTGG...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTCACAAACTTGGGCTCATaGAGCCAGCGGGAGTCGTGT +
Preference number: 5 (lower is better)
Translates to: WCLHRPVTPNVPGPNPSFTNLGS*SQRESC
Trigger: ACACGACTCCCGCTGGCTCAATGAGCCCAAGTTTGT...GAAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAAACAAACTTGGGCTCATaGAGCCAGCGGGAGTCGTGT +
Preference number: 5 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQTNLGS*SQRESC
Trigger: ACACGACTCCCGCTGGCTCAATGAGCCCAAGTTTGT...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GCCCTGACACCGCTAGTAAGGTGCCCAAGACCACATAGCAAGGCCGAGGACTGGCCAGGCCTGGAGCTCTaGGAAGGAGAGCCGAAGGCG +
Preference number: 5 (lower is better)
Translates to: ALTPLVRCPRPHSKAEDWPGLEL*EGEPKA
Trigger: CGCCTTCGGCTCTCCTTCCAAGAGCTCCAGGCCTGG...CCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGTCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR CAA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAAAGCTTCTTGGCCCGCTaGCTGATGTTGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQSFLAR*LMLSRL
Trigger: CAACCTGGACAACATCAGCAAGCGGGCCAAGAAGCT...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCGGCCAGGCCAGCTTCTaGGCCCGCTTGCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLGQASF*ARLLML
Trigger: CAACATCAGCAAGCGGGCCAAGAAGCTGGCCTGGCC...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS GCA 90 bp CCTTGTGTGCAAAGGGTCCCAAGAAGGCCCGGCGCACGTCGTTCATaGTGTACACGCACACCGCAGAGCCCTGGAAGATGCTGCTGGACG +
Preference number: 5 (lower is better)
Translates to: PCVQRVPRRPGARRS*CTRTPQSPGRCCWT
Trigger: CGTCCAGCAGCATCTTCCAGGGCTCTGCGGTGTGCGTGTACAGCATGAACGACGTGCGCCGGGCCTTCTTGGGACCCTTTGCACACAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 90 bp CCTTGTGTGCAAAGGGTCCCAAGAAGGCCCGGCGCACGTCGTTCATaGTGTACACGCACACCGCAGAGCCCTGGAAGATGCTGGACGTGG +
Preference number: 5 (lower is better)
Translates to: PCVQRVPRRPGARRS*CTRTPQSPGRCWTW
Trigger: CCACGTCCAGCATCTTCCAGGGCTCTGCGGTGTGCGTGTACAGCATGAACGACGTGCGCCGGGCCTTCTTGGGACCCTTTGCACACAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000434030.1
ENST00000441915.5
ENST00000456560.6
CDS GCA 90 bp CCAGCCCAGGCCTCACGAGGGTGGGTGTCTGGGGAAGCACAGGCCTaGAAAGCCTCCCATGACTCAGAGGCACCCCAGAAGAATTACACG +
Preference number: 5 (lower is better)
Translates to: PAQASRGWVSGEAQA*KASHDSEAPQKNYT
Trigger: CGTGTAATTCTTCTGGGGTGCCTCTGAGTCATGGGAGGCTTTGCAGGCCTGTGCTTCCCCAGACACCCACCCTCGTGAGGCCTGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441915.5
CDS CCA 90 bp TTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTCCTGCTTaGTTCCCGGCGTGGGGACAGTCTGGTCACCAGTGCGTTGCGCTG +
Preference number: 5 (lower is better)
Translates to: FSGSVWLLSRLSSPA*FPAWGQSGHQCVAL
Trigger: CAGCGCAACGCACTGGTGACCAGACTGTCCCCACGCCGGGAACCAAGCAGGAGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS-3UTR CAA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCAGGAACGTCGTCCACTaGTTGACCAGGCTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLRNVVH*LTRLRW
Trigger: CCAGCGCAGCCTGGTCAACAAGTGGACGACGTTCCT...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTGCATGGGCCCCTCCTaGTGTGCAAAGGGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLCMGPS*CAKGPK
Trigger: CTTGGGACCCTTTGCACACAAGGAGGGGCCCATGCA...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTAAGGTGCCAAAGGTCTaGCTGGGGCACATGCCTGGC +
Preference number: 5 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAKVPKV*LGHMPG
Trigger: GCCAGGCATGTGCCCCAGCAAGACCTTTGGCACCTT...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTGGGCAGGACAGAGTaGTACATGAGGGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPVGRTE*YMRGWF
Trigger: GAACCACCCCCTCATGTACAACTCTGTCCTGCCCAC...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTGCCATTCCTTACGTCTaGCCGCCGGAACCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: PAPTRPSFQGLSGSSLACAIPYV*PPEPPL
Trigger: AAGAGGCGGTTCCGGCGGCAAGACGTAAGGAATGGC...ACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCTCCACGCCGAACACCTaGTGTTCCAGCAGCGCGGGA +
Preference number: 5 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLSTPNT*CSSSAG
Trigger: TCCCGCGCTGCTGGAACACAAGGTGTTCGGCGTGGA...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTCAGGCGACGCAGCGGTaGCGTAAAGCCCTGCTCGAC +
Preference number: 5 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSQATQR*RKALLD
Trigger: GTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCTG...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACCTGTGCCGCGGGGCCATTCCAGCTTaGGCTGATAATGCGTTTATT +
Preference number: 5 (lower is better)
Translates to: LGFPVPSLRLNPAPDLCRGAIPA*ADNAFI
Trigger: AATAAACGCATTATCAGCCAAAGCTGGAATGGCCCC...GCGGCACAGGTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456560.6
ENST00000616701.5
CDS-3UTR CAA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCCCACAAAGGCACAGGTaGGGTGGAAGGCTCCCGTGC +
Preference number: 5 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLPQRHR*GGRLPC
Trigger: GCACGGGAGCCTTCCACCCAACCTGTGCCTTTGTGG...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CTCCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCAATACCTTGACAAACTaGGGCTCATTGAGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: LQAPPRPWSLLWSSASPSNTLTN*GSLSQR
Trigger: CCGCTGGCTCAATGAGCCCAAGTTTGTCAAGGTATT...GGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCAGGCACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTAATACCTTGACAAACTaGGGCTCATTGAGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: PGTSSALVVALELGFPVPNTLTN*GSLSQR
Trigger: CCGCTGGCTCAATGAGCCCAAGTTTGTCAAGGTATT...AGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS TCA 90 bp GTTCTCGCTCTCCGGGATCCAAAATACCTTGACAAACTTGGGCTCTaGCCGCGGCAGGAGGCATGGGTCAGCGGGTCCTGGCCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: VLALRDPKYLDKLGL*PRQEAWVSGSWPCL
Trigger: GAGGCAAGGCCAGGACCCGCTGACCCATGCCTCCTGCCGCGGTCAGAGCCCAAGTTTGTCAAGGTATTTTGGATCCCGGAGAGCGAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434030.1
ENST00000439487.5
ENST00000456560.6
CDS GCA 90 bp CTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTCCTaGTTGGTTCCCGGCGTGGGGACAGTCTGGTCACCAGTGCGTTGC +
Preference number: 5 (lower is better)
Translates to: LLFRVCLAPLSPVVS*LVPGVGTVWSPVRC
Trigger: GCAACGCACTGGTGACCAGACTGTCCCCACGCCGGGAACCAAGCAGGAGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 90 bp GGTGGCCCACTTCCACAAAGGCACAGGTTGGGTGGAAGGCTCCCGTaGCACAGGCCAGCAAATGGGTGCGGTTGTAGGCATGCAGCAACT +
Preference number: 5 (lower is better)
Translates to: GGPLPQRHRLGGRLP*HRPANGCGCRHAAT
Trigger: AGTTGCTGCATGCCTACAACCGCACCCATTTGCTGGCCTGTGGCACGGGAGCCTTCCACCCAACCTGTGCCTTTGTGGAAGTGGGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000433753.4
ENST00000441915.5
ENST00000611067.4
ENST00000612509.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
ENST00000621029.4
CDS-3UTR CAA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCCCGCCCACGTCGTTCTaGACAAACTTGGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLPPTSF*TNLGSD
Trigger: GTCAGAGCCCAAGTTTGTCAAGAACGACGTGGGCGG...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418576.3
CDS-3UTR CAA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCTGCATGGGCCCCTCCTaGTGTGCAAAGGGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLCMGPS*CAKGPK
Trigger: CTTGGGACCCTTTGCACACAAGGAGGGGCCCATGCA...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCTGGGCCTACTGCCCTaGGGGACCGAGATCACCTTC +
Preference number: 5 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSLGLLP*GTEITF
Trigger: GAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCAG...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp ACCAGGCAACCTTGGACAGGAGAAACTCGGGCCCTGACACCGCTAGTAAGGTGCCTGGGCCTACTGCCCTaGGGGACCGAGATCACCTTC +
Preference number: 5 (lower is better)
Translates to: TRQPWTGETRALTPLVRCLGLLP*GTEITF
Trigger: GAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCAG...GCACCTTACTAGCGGTGTCAGGGCCCGAGTTTCTCCTGTCCAAGGTTGCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR CAA 90 bp GCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCGGCTGAATCCTGCGCCCGACTACAGCTGGTGCCTCTaGGAAGAAATTTGCATGCTG +
Preference number: 5 (lower is better)
Translates to: ALELGFPVPSLRLNPAPDYSWCL*EEICML
Trigger: CAGCATGCAAATTTCTTCCAAGAGGCACCAGCTGTA...GTCGGGCGCAGGATTCAGCCGGAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTTCCACGCCGAACACCTaGTGTTCCAGCAGCGCGGGA +
Preference number: 5 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSSTPNT*CSSSAG
Trigger: TCCCGCGCTGCTGGAACACAAGGTGTTCGGCGTGGA...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTTCCACGCCGAACACCTaGTGTTCCAGCAGCGCGGGA +
Preference number: 5 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSSTPNT*CSSSAG
Trigger: TCCCGCGCTGCTGGAACACAAGGTGTTCGGCGTGGA...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp ACACCGCTAGTAAGGTGCCCAAGACCACATAGCAAGGCCGAGGACTGGGGTTTTGCCAGGGCCTGTCGGTaGGTGTCTCCATCGGCCGGT +
Preference number: 5 (lower is better)
Translates to: TPLVRCPRPHSKAEDWGFARACR*VSPSAG
Trigger: ACCGGCCGATGGAGACACCAACCGACAGGCCCTGGC...AAAACCCCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS-3UTR CAA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCCACAAAGGCACAGGTaGGGTGGAAGGCTCCCGTGC +
Preference number: 5 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSPQRHR*GGRLPC
Trigger: GCACGGGAGCCTTCCACCCAACCTGTGCCTTTGTGG...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTGCTCTGTTCGGAGACTaGGACGTTGCCCTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: APTRPSFQGLSGSSLACRALFGD*DVALGC
Trigger: GCAGCCTAGGGCAACGTCCAAGTCTCCGAACAGAGC...ACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACAATACCTTGACAAACTaGGGCTCATTGAGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: PVGWCLHRPVTPNVPGPNNTLTN*GSLSQR
Trigger: CCGCTGGCTCAATGAGCCCAAGTTTGTCAAGGTATT...GTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATGCCCGCTTGCTGATGTaGTCCAGGTTGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNARLLM*SRLREA
Trigger: GGCCTCCCTCAACCTGGACAACATCAGCAAGCGGGC...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS TCA 90 bp CCTCATCCACCAGCAAGGCCTGGTAGCAGCAGGTTCGCTCCAGGCTaGAAGTCTGGAGACCATGCCAGGCCTGGAGCTCTTGGAAGGAGA +
Preference number: 5 (lower is better)
Translates to: PHPPARPGSSRFAPG*KSGDHARPGALGRR
Trigger: TCTCCTTCCAAGAGCTCCAGGCCTGGCATGGTCTCCAGACTTTCAGCCTGGAGCGAACCTGCTGCTACCAGGCCTTGCTGGTGGATGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000433753.4
ENST00000611067.4
ENST00000612509.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
ENST00000621029.4
CDS GCA 90 bp ACCGTGCCAACGTCTGCAGGGATGAGAAGGGGTAATGACCATTGGTaGTCCCGGACAGCTGGGGCTAGTGTCTCCTCGCCTTTGAGGCGT +
Preference number: 5 (lower is better)
Translates to: TVPTSAGMRRGNDHW*SRTAGASVSSPLRR
Trigger: ACGCCTCAAAGGCGAGGAGACACTAGCCCCAGCTGTCCGGGAGCACCAATGGTCATTACCCCTTCTCATCCCTGCAGACGTTGGCACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS CCA 90 bp AGCACCGTGCCAACGTCTGCAGGGATGAGAAGGGGTAATGACCATTaGTGCTCCCGGACAGCTGGGGCTAGTGTCTCCTCGCCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: STVPTSAGMRRGNDH*CSRTAGASVSSPLR
Trigger: CCTCAAAGGCGAGGAGACACTAGCCCCAGCTGTCCGGGAGCACCAATGGTCATTACCCCTTCTCATCCCTGCAGACGTTGGCACGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS CCA 90 bp TTCTTGGCCCGCTTGCTGATGTTGTCCAGGTTGAGGGAGGCCACATaGTTCTCGGCACCCACAAACAGGCGTCCACGCTCCTCATCCACC +
Preference number: 5 (lower is better)
Translates to: FLARLLMLSRLREAT*FSAPTNRRPRSSST
Trigger: GGTGGATGAGGAGCGTGGACGCCTGTTTGTGGGTGCCGAGAACCATGTGGCCTCCCTCAACCTGGACAACATCAGCAAGCGGGCCAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000433753.4
ENST00000611067.4
ENST00000612509.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
ENST00000621029.4
CDS-3UTR CAA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCGTCTGGGAAGTCCTaGGTGGAACTGAAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLSSGKS*VELKVP
Trigger: TGGCACCTTCAGTTCCACCAAGGACTTCCCAGACGA...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCGTGGGCAGGACAGAGTaGTACATGAGGGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: PHLQQPSLFTAFCSLLTTVGRTE*YMRGWF
Trigger: GAACCACCCCCTCATGTACAACTCTGTCCTGCCCAC...GGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCCGGTCCGCGGCAATTaGAGTGAAGGTGTAATTGGC +
Preference number: 5 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTAPVRGN*SEGVIG
Trigger: GCCAATTACACCTTCACTCAAATTGCCGCGGACCGG...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTCCTCTTGGAAGAAATTaGCATGCTGGTGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: ARPQPVLLFRVCLAPLSPPLGRN*HAGDSG
Trigger: GCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAGG...AGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCCCTCTTGGAAGAAATTaGCATGCTGGTGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: CPAPTRPSFQGLSGSSLAPLGRN*HAGDSG
Trigger: GCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAGG...GGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CAGCCAGGGCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCTACAGCTGGTGCCTCTaGGAAGAAATTTGCATGCTG +
Preference number: 5 (lower is better)
Translates to: QPGPVGWCLHRPVTPNVPYSWCL*EEICML
Trigger: CAGCATGCAAATTTCTTCCAAGAGGCACCAGCTGTA...GGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGCCCTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAATACAGCTGGTGCCTCTaGGAAGAAATTTGCATGCTG +
Preference number: 5 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQYSWCL*EEICML
Trigger: CAGCATGCAAATTTCTTCCAAGAGGCACCAGCTGTA...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCAGCCATTCCTTACGTCTaGCCGCCGGAACCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPAIPYV*PPEPPL
Trigger: AAGAGGCGGTTCCGGCGGCAAGACGTAAGGAATGGC...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TGCCTCGCCCCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTACAAACTTGGGCTCATaGAGCCAGCGGGAGTCGTGT +
Preference number: 5 (lower is better)
Translates to: CLAPPPAAQPVHSFLLTATNLGS*SQRESC
Trigger: ACACGACTCCCGCTGGCTCAATGAGCCCAAGTTTGT...AGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGGGGCGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS GCA 90 bp TCACGAAGTTCATGCACTCAGTACCAATGTCCTTCCCTGCCCAGTTaGACTCCTCTCGCCATTCCACAGGGGCCGGCCAGGCCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SRSSCTQYQCPSLPS*TPLAIPQGPARPAS
Trigger: AGAAGCTGGCCTGGCCGGCCCCTGTGGAATGGCGAGAGGAGTGCAACTGGGCAGGGAAGGACATTGGTACTGAGTGCATGAACTTCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433753.4
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
ENST00000621029.4
CDS GCA 90 bp GCTGCCTCTTCTCAGGTTCTAGAGGTCTTCCAGGCCAACACTGGCTaGCTTCTCACACTCCACCGAGGACTTCCGCAGCAGCATCTCTCC +
Preference number: 5 (lower is better)
Translates to: AASSQVLEVFQANTG*LLTLHRGLPQQHLS
Trigger: GGAGAGATGCTGCTGCGGAAGTCCTCGGTGGAGTGTGAGAAGGCAGCCAGTGTTGGCCTGGAAGACCTCTAGAACCTGAGAAGAGGCAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618865.4
ENST00000621029.4
CDS-3UTR CAA 90 bp GCCTGTCGGTTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAAGGGATCCAAAATACCTaGACAAACTTGGGCTCATTG +
Preference number: 5 (lower is better)
Translates to: ACRLVSPSAGDPQCARPQGIQNT*TNLGSL
Trigger: CAATGAGCCCAAGTTTGTCAAGGTATTTTGGATCCC...TTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAACCGACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp GCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTGATGTTGTCCAGGTaGAGGGAGGCCACATGGTTC +
Preference number: 5 (lower is better)
Translates to: APTRPSFQGLSGSSLACRLMLSR*REATWF
Trigger: GAACCATGTGGCCTCCCTCAACCTGGACAACATCAG...ACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS TCA 90 bp CATAGTGTCCGTCAGCGGCTGCAACCCGGTCCGCGGCAATTTGAGTaGAGGTGTAATTGGCTCCAACTTGTAGGAAAAGAGGGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: HSVRQRLQPGPRQFE*RCNWLQLVGKEGAP
Trigger: GGGGGCGCCCTCTTTTCCTACAAGTTGGAGCCAATTACACCTTCACTCAAATTGCCGCGGACCGGGTTGCAGCCGCTGACGGACACTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS TCA 90 bp ACCATTGGTGCTCCCGGACAGCTGGGGCTAGTGTCTCCTCGCCTTTaGGGCGTCTACCCTCAGCATGTTTGGGTTGTGAAGAGTGTGGAC +
Preference number: 5 (lower is better)
Translates to: TIGAPGQLGLVSPRL*GVYPQHVWVVKSVD
Trigger: GTCCACACTCTTCACAACCCAAACATGCTGAGGGTAGACGCCTCAAAGGCGAGGAGACACTAGCCCCAGCTGTCCGGGAGCACCAATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS TCA 90 bp TTTTGTCGTCGTCTGGGTTCTCGCTCTCCGGGATCCAAAATACCTTaGCAAACTTGGGCTCTGACCGCGGCAGGAGGCATGGGTCAGCGG +
Preference number: 5 (lower is better)
Translates to: FCRRLGSRSPGSKIP*QTWALTAAGGMGQR
Trigger: CCGCTGACCCATGCCTCCTGCCGCGGTCAGAGCCCAAGTTTGTCAAGGTATTTTGGATCCCGGAGAGCGAGAACCCAGACGACGACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434030.1
ENST00000439487.5
ENST00000456560.6
CDS-3UTR CAA 90 bp CCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTCCGGTCCGCGGCAATTaGAGTGAAGGTGTAATTGGC +
Preference number: 5 (lower is better)
Translates to: PNPSFFSGSVWLLSRLSSPVRGN*SEGVIG
Trigger: GCCAATTACACCTTCACTCAAATTGCCGCGGACCGG...AGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCACCGGTCCGCGGCAATTaGAGTGAAGGTGTAATTGGC +
Preference number: 5 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPPVRGN*SEGVIG
Trigger: GCCAATTACACCTTCACTCAAATTGCCGCGGACCGG...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCCCTCTTGGAAGAAATTaGCATGCTGGTGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLPLGRN*HAGDSG
Trigger: GCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAGG...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp TTGGTGTCTCCATCGGCCGGTGACCCCCAATGTGCCCGGCCCCAACCCGTCCTTGGGATCCAAAATACCTaGACAAACTTGGGCTCATTG +
Preference number: 5 (lower is better)
Translates to: LVSPSAGDPQCARPQPVLGIQNT*TNLGSL
Trigger: CAATGAGCCCAAGTTTGTCAAGGTATTTTGGATCCC...AAGGACGGGTTGGGGCCGGGCACATTGGGGGTCACCGGCCGATGGAGACACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CTGACACCGCTAGTAAGGTGCCCAAGACCACATAGCAAGGCCGAGGACTGGGGTCTGATGTTGTCCAGGTaGAGGGAGGCCACATGGTTC +
Preference number: 5 (lower is better)
Translates to: LTPLVRCPRPHSKAEDWGLMLSR*REATWF
Trigger: GAACCATGTGGCCTCCCTCAACCTGGACAACATCAG...ACCCCAGTCCTCGGCCTTGCTATGTGGTCTTGGGCACCTTACTAGCGGTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616701.5
CDS GCA 90 bp TTGAGCCAGCGGGAGTCGTGTGGCTCTGTTCGGAGACTTGGACGTTaGCCTAGGCTGCGAAAGATGGTAAAGTCTCGTCCCATGAGGTCT +
Preference number: 5 (lower is better)
Translates to: LSQRESCGSVRRLGR*PRLRKMVKSRPMRS
Trigger: AGACCTCATGGGACGAGACTTTACCATCTTTCGCAGCCTAGGGCAACGTCCAAGTCTCCGAACAGAGCCACACGACTCCCGCTGGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000433753.4
ENST00000441915.5
ENST00000611067.4
ENST00000612509.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 90 bp CAAGAAGACCCCAGGCCAAGTTCTCAAACCCTTGAGGCTTTGAAGTaGGTTGTAGCAGAAGTCCCTGGGCTACGAACCATGCCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: QEDPRPSSQTLEALK*VVAEVPGLRTMPGR
Trigger: GCGGCCAGGCATGGTTCGTAGCCCAGGGACTTCTGCTACAACCCACTTCAAAGCCTCAAGGGTTTGAGAACTTGGCCTGGGGTCTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419007.5
ENST00000434030.1
CDS-3UTR CAA 90 bp CCCAATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTACAGCTGGTGCCTCTaGGAAGAAATTTGCATGCTG +
Preference number: 5 (lower is better)
Translates to: PNVPGPNPSFFSGSVWLLYSWCL*EEICML
Trigger: CAGCATGCAAATTTCTTCCAAGAGGCACCAGCTGTA...GAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS TCA 90 bp CCCATCGGTCAGGGATCCCTTCTTCCACTCGACAGATGGGAACACTaGGGTCTTACGCCTCAGGTCACACAGTCTAACAAAGCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: PIGQGSLLPLDRWEH*GLTPQVTQSNKARA
Trigger: GGCTCTGGCTTTGTTAGACTGTGTGACCTGAGGCGTAAGACCTCAGTGTTCCCATCTGTCGAGTGGAAGAAGGGATCCCTGACCGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416295.1
ENST00000419007.5
CDS TCA 90 bp TGTCTCCTCGCCTTTGAGGCGTCTACCCTCAGCATGTTTGGGTTGTaGAGAGTGTGGACTGGAAGAGTGTGGGTTGGGCAGCATCCACAG +
Preference number: 5 (lower is better)
Translates to: CLLAFEASTLSMFGL*RVWTGRVWVGQHPQ
Trigger: CTGTGGATGCTGCCCAACCCACACTCTTCCAGTCCACACTCTTCACAACCCAAACATGCTGAGGGTAGACGCCTCAAAGGCGAGGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS TCA 90 bp CAACTTCACGAAGTTCATGCACTCAGTCTAGTAGGGTTGGAGGTGTaGGGCTTCCCCCAGGGACGTAGCCTTAAGAGGTCCCAGCTCACC +
Preference number: 5 (lower is better)
Translates to: QLHEVHALSLVGLEV*GFPQGRSLKRSQLT
Trigger: GGTGAGCTGGGACCTCTTAAGGCTACGTCCCTGGGGGAAGCCTCACACCTCCAACCCTACTAGACTGAGTGCATGAACTTCGTGAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441915.5
CDS GCA 90 bp AACGTCTGTGCCAATGAAGAGGACGTCATAGTGTCCGTCAGCGGCTaGAACCCGGTCCGCGGCAATTTGAGTGAAGGTGTAATTGGCTCC +
Preference number: 5 (lower is better)
Translates to: NVCANEEDVIVSVSG*NPVRGNLSEGVIGS
Trigger: GGAGCCAATTACACCTTCACTCAAATTGCCGCGGACCGGGTTGCAGCCGCTGACGGACACTATGACGTCCTCTTCATTGGCACAGACGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 90 bp GCAAATGGGTGCGGTTGTAGGCATGCAGCAACTTCACGAAGTTCATaGACTCAGTCTAGTAGGGTTGGAGGTGTGAGGCTTCCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: ANGCGCRHAATSRSS*TQSSRVGGVRLPPG
Trigger: CCCTGGGGGAAGCCTCACACCTCCAACCCTACTAGACTGAGTGCATGAACTTCGTGAAGTTGCTGCATGCCTACAACCGCACCCATTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441915.5
CDS-3UTR CAA 90 bp ACCTCCTCGGCCCTGGTCGTTGCTCTGGAGCTCGGCTTCCCCGTCCCTTCCCTCCTGATAATGCGTTTATaGCGTTACTTTAGTACAGTC +
Preference number: 5 (lower is better)
Translates to: TSSALVVALELGFPVPSLLIMRL*RYFSTV
Trigger: GACTGTACTAAAGTAACGCAATAAACGCATTATCAG...GAGGGAAGGGACGGGGAAGCCGAGCTCCAGAGCAACGACCAGGGCCGAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp AATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTGGGATCCAAAATACCTaGACAAACTTGGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: NVPGPNPSFFSGSVWLLSGIQNT*TNLGSD
Trigger: GTCAGAGCCCAAGTTTGTCAAGGTATTTTGGATCCC...AGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456560.6
CDS-3UTR CAA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATGGGATCCAAAATACCTaGACAAACTTGGGCTCATTG +
Preference number: 5 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNGIQNT*TNLGSL
Trigger: CAATGAGCCCAAGTTTGTCAAGGTATTTTGGATCCC...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433753.4
ENST00000616701.5
ENST00000618865.4
CDS TCA 90 bp AAACCACATTCACCAAGAAGACCCCAGGCCAAGTTCTCAAACCCTTaGGGCTTTGAAGTGGGTTGTAGCAGAAGTCCCTGGGCTACGAAC +
Preference number: 5 (lower is better)
Translates to: KPHSPRRPQAKFSNP*GFEVGCSRSPWATN
Trigger: GTTCGTAGCCCAGGGACTTCTGCTACAACCCACTTCAAAGCCTCAAGGGTTTGAGAACTTGGCCTGGGGTCTTCTTGGTGAATGTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419007.5
ENST00000434030.1
CDS-3UTR CAA 90 bp ATGTGCCCGGCCCCAACCCGTCCTTCTTTTCAGGGTCTGTCTGGCTCCTCTCTCCTGATAATGCGTTTATaGCGTTACTTTAGTACAGTC +
Preference number: 5 (lower is better)
Translates to: MCPAPTRPSFQGLSGSSLLIMRL*RYFSTV
Trigger: GACTGTACTAAAGTAACGCAATAAACGCATTATCAG...GAGAGAGGAGCCAGACAGACCCTGAAAAGAAGGACGGGTTGGGGCCGGGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCCGACCTGTGCCGCCCTCCCGGGGCTGCTACATTCAAGGGTTATCCTGTTAATCTGATAATGCGTTTATaGCGTTACTTTAGTACAGTC +
Preference number: 5 (lower is better)
Translates to: PDLCRPPGAATFKGYPVNLIMRL*RYFSTV
Trigger: GACTGTACTAAAGTAACGCAATAAACGCATTATCAG...ATTAACAGGATAACCCTTGAATGTAGCAGCCCCGGGAGGGCGGCACAGGTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS-3UTR CAA 90 bp CCACCTCCAGCAGCCCAGCCTGTTCACAGCTTTCTGCTCACTGCTCACTACCCACTGATAATGCGTTTATaGCGTTACTTTAGTACAGTC +
Preference number: 5 (lower is better)
Translates to: PPPAAQPVHSFLLTAHYPLIMRL*RYFSTV
Trigger: GACTGTACTAAAGTAACGCAATAAACGCATTATCAG...TGGGTAGTGAGCAGTGAGCAGAAAGCTGTGAACAGGCTGGGCTGCTGGAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433753.4
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
CDS GCA 72 bp GGCGCCGCAGCCTGCGCAGCAGTAGTCCCCGGGCGGTaGGCTCGGTGCGCTCCTCTGCCAGCACCTGCGGGC +
Preference number: 6 (lower is better)
Translates to: GAAACAAVVPGR*ARCAPLPAPAG
Trigger: GCCCGCAGGTGCTGGCAGAGGAGCGCACCGAGCGCACCGCCCGGGGACTACTGCTGCGCAGGCTGCGGCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS GCA 72 bp GGCGCCGCAGCCTGCGCAGCAGTAGTCCCCGGGCGGTaGGCTCGGTGCGCTCCTCTGCCAGCACCTGGGTGT +
Preference number: 6 (lower is better)
Translates to: GAAACAAVVPGR*ARCAPLPAPGC
Trigger: ACACCCAGGTGCTGGCAGAGGAGCGCACCGAGCGCACCGCCCGGGGACTACTGCTGCGCAGGCTGCGGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp CGCACAAGTACACGCCCGAGTCCCGGCGCCGCAGCCTaGGCAGCAGTAGTCCCCGGGCGGTGCGCTCGGTGC +
Preference number: 6 (lower is better)
Translates to: RTSTRPSPGAAA*AAVVPGRCARC
Trigger: GCACCGAGCGCACCGCCCGGGGACTACTGCTGCGCAGGCTGCGGCGCCGGGACTCGGGCGTGTACTTGTGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp GGGGCAGTGACTGCAGCGCAGGCTGCGGGCGGCACATaGGCAGGGAGTTCGCGCTGCCACCTCCGCCCGGCT +
Preference number: 6 (lower is better)
Translates to: GAVTAAQAAGGT*AGSSRCHLRPA
Trigger: AGCCGGGCGGAGGTGGCAGCGCGAACTCCCTGCGCATGTGCCGCCCGCAGCCTGCGCTGCAGTCACTGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp GCCTGCGCAGCAGTAGTCCCCGGGCGGTGCGCTCGGTaGGCTCCTCTGCCAGCACCTGCGGGCAGAGGGCAG +
Preference number: 6 (lower is better)
Translates to: ACAAVVPGRCAR*APLPAPAGRGQ
Trigger: CTGCCCTCTGCCCGCAGGTGCTGGCAGAGGAGCGCACCGAGCGCACCGCCCGGGGACTACTGCTGCGCAGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS CCA 72 bp CTGCGCGGCCCCCGCTCAGCGCGAGGCTCAGGGGCGTaGGTCCTCCGGTTACGGCCCTTTCTCCGCGACTCC +
Preference number: 6 (lower is better)
Translates to: LRGPRSARGSGA*VLRLRPFLRDS
Trigger: GGAGTCGCGGAGAAAGGGCCGTAACCGGAGGACCCACGCCCCTGAGCCTCGCGCTGAGCGGGGGCCGCGCAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp CATTCGGTGCAGACGCGGCCGTGGGCAGCGCAGCGGTaGAACGCGATCTGGGCCACCGCGCTCCGCGAGGCT +
Preference number: 6 (lower is better)
Translates to: HSVQTRPWAAQR*NAIWATALREA
Trigger: AGCCTCGCGGAGCGCGGTGGCCCAGATCGCGTTGCACCGCTGCGCTGCCCACGGCCGCGTCTGCACCGAATG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp GTTCCCGGCGTGGGGACAGTCTGGTCACCAGTGCGTTaGGCTGCGCGGCCCCCGCTCAGCGCGAGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: VPGVGTVWSPVR*AARPPLSARLR
Trigger: CCTGAGCCTCGCGCTGAGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCAGACTGTCCCCACGCCGGGAAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp GCTTGGTTCCCGGCGTGGGGACAGTCTGGTCACCAGTaGGTTGCGCTGCGCGGCCCCCGCTCAGCGCGAGGC +
Preference number: 6 (lower is better)
Translates to: AWFPAWGQSGHQ*VALRGPRSARG
Trigger: GCCTCGCGCTGAGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCAGACTGTCCCCACGCCGGGAACCAAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 72 bp ACGCGGCCGTGGGCAGCGCAGCGGTGCAACGCGATCTaGGCCACCGCGCTCCGCGAGGCTACGTACAGCTGG +
Preference number: 6 (lower is better)
Translates to: TRPWAAQRCNAI*ATALREATYSW
Trigger: CCAGCTGTACGTAGCCTCGCGGAGCGCGGTGGCCCAGATCGCGTTGCACCGCTGCGCTGCCCACGGCCGCGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 72 bp GCTCCACCAGCTGCAGAAAGTCCCGGTACCAGAGTTTaGGGCCCGGCGGCGCGGCGGGCGCAGCCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: APPAAESPGTRV*GPAARRAQPPR
Trigger: CCGAGGAGGCTGCGCCCGCCGCGCCGCCGGGCCCCAAACTCTGGTACCGGGACTTTCTGCAGCTGGTGGAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 72 bp GGTTCCCGGCGTGGGGACAGTCTGGTCACCAGTGCGTaGCGCTGCGCGGCCCCCGCTCAGCGCGAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: GSRRGDSLVTSA*RCAAPAQREAQ
Trigger: CTGAGCCTCGCGCTGAGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCAGACTGTCCCCACGCCGGGAACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp GCCGGAACCGCCTCTTGGCACTGGGCTGGAAGCGCGTaGACGCGACCCCGTCCCAGGCGCAGTAGGGGTCAC +
Preference number: 6 (lower is better)
Translates to: AGTASWHWAGSA*TRPRPRRSRGH
Trigger: GTGACCCCTACTGCGCCTGGGACGGGGTCGCGTGCACGCGCTTCCAGCCCAGTGCCAAGAGGCGGTTCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp GCCTGCGCAGCAGTAGTCCCCGGGCGGTGCGCTCGGTaGGCTCCTCTGCCAGCACCTGGGTGTGGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: ACAAVVPGRCAR*APLPAPGCGLS
Trigger: TGACAGCCCACACCCAGGTGCTGGCAGAGGAGCGCACCGAGCGCACCGCCCGGGGACTACTGCTGCGCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp GGCGCAGCCTCCTCGGCCCGCGCCAGTCGTTCGGCCTaGGTAGCACTCAACACGTGCAGCGACAGGCGACGC +
Preference number: 6 (lower is better)
Translates to: GAASSARASRSA*VALNTCSDRRR
Trigger: GCGTCGCCTGTCGCTGCACGTGTTGAGTGCTACGCAGGCCGAACGACTGGCGCGGGCCGAGGAGGCTGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 72 bp ACGTCTTGCCGCCGGAACCGCCTCTTGGCACTGGGCTaGAAGCGCGTGCACGCGACCCCGTCCCAGGCGCAG +
Preference number: 6 (lower is better)
Translates to: TSCRRNRLLALG*KRVHATPSQAQ
Trigger: CTGCGCCTGGGACGGGGTCGCGTGCACGCGCTTCCAGCCCAGTGCCAAGAGGCGGTTCCGGCGGCAAGACGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 72 bp GCCAGCACCTGGGTGTGGGCTGTCACCCCTGCGCGCTaGAAAGTCCACTCCACGCGCGCCTGCAGCGAGCGG +
Preference number: 6 (lower is better)
Translates to: ASTWVWAVTPAR*KVHSTRACSER
Trigger: CCGCTCGCTGCAGGCGCGCGTGGAGTGGACTTTCCAGCGCGCAGGGGTGACAGCCCACACCCAGGTGCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 72 bp CCGGGTGTGGCCCAGGGACTCCTCACCCGGCAGATCTaGCCAACGCGGGACACGGACAGGCGTCCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: PGVAQGLLTRQI*PTRDTDRRPSA
Trigger: GGCACTGGGACGCCTGTCCGTGTCCCGCGTTGGCCAGATCTGCCGGGTGAGGAGTCCCTGGGCCACACCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS GCA 72 bp CCGCGGCAGGAGGCATGGGTCAGCGGGTCCTGGCCTTaGCTCCTGATGCGAGACCCACGCGCTGCTTCCCCT +
Preference number: 6 (lower is better)
Translates to: PRQEAWVSGSWP*LLMRDPRAASP
Trigger: AGGGGAAGCAGCGCGTGGGTCTCGCATCAGGAGGCAAGGCCAGGACCCGCTGACCCATGCCTCCTGCCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000434030.1
ENST00000439487.5
ENST00000456210.5
ENST00000456560.6
CDS GCA 72 bp AGGCGCAGTAGGGGTCACGCGCCAGACAGCATTCGGTaGAGACGCGGCCGTGGGCAGCGCAGCGGTGCAACG +
Preference number: 6 (lower is better)
Translates to: RRSRGHAPDSIR*RRGRGQRSGAT
Trigger: CGTTGCACCGCTGCGCTGCCCACGGCCGCGTCTGCACCGAATGCTGTCTGGCGCGTGACCCCTACTGCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp CAGGCTGCGGGCGGCACATGCGCAGGGAGTTCGCGCTaGCACCTCCGCCCGGCTCCACCAGCTGCAGAAAGT +
Preference number: 6 (lower is better)
Translates to: QAAGGTCAGSSR*HLRPAPPAAES
Trigger: ACTTTCTGCAGCTGGTGGAGCCGGGCGGAGGTGGCAGCGCGAACTCCCTGCGCATGTGCCGCCCGCAGCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 72 bp TCACGCGCCAGACAGCATTCGGTGCAGACGCGGCCGTaGGCAGCGCAGCGGTGCAACGCGATCTGGGCCACC +
Preference number: 6 (lower is better)
Translates to: SRARQHSVQTRP*AAQRCNAIWAT
Trigger: GGTGGCCCAGATCGCGTTGCACCGCTGCGCTGCCCACGGCCGCGTCTGCACCGAATGCTGTCTGGCGCGTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 72 bp GTCGTCTCCTGCTTGGTTCCCGGCGTGGGGACAGTCTaGTCACCAGTGCGTTGCGCTGCGCGGCCCCCGCTC +
Preference number: 6 (lower is better)
Translates to: VVSCLVPGVGTV*SPVRCAARPPL
Trigger: GAGCGGGGGCCGCGCAGCGCAACGCACTGGTGACCAGACTGTCCCCACGCCGGGAACCAAGCAGGAGACGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 72 bp ACCGCGGCAGGAGGCATGGGTCAGCGGGTCCTGGCCTaGCCTCCTGATGCGAGACCCACGCGCTGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: TAAGGMGQRVLA*PPDARPTRCFP
Trigger: GGGGAAGCAGCGCGTGGGTCTCGCATCAGGAGGCAAGGCCAGGACCCGCTGACCCATGCCTCCTGCCGCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000434030.1
ENST00000439487.5
ENST00000456210.5
ENST00000456560.6
CDS GCA 72 bp ACCCCTGCGCGCTGGAAAGTCCACTCCACGCGCGCCTaGAGCGAGCGGGGCTCACACTCCAGAAAGGCGCTG +
Preference number: 6 (lower is better)
Translates to: TPARWKVHSTRA*SERGSHSRKAL
Trigger: CAGCGCCTTTCTGGAGTGTGAGCCCCGCTCGCTGCAGGCGCGCGTGGAGTGGACTTTCCAGCGCGCAGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp CTCCTCTGCCAGCACCTGGGTGTGGGCTGTCACCCCTaGGCGCTGGAAAGTCCACTCCACGCGCGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: LLCQHLGVGCHP*ALESPLHARLQ
Trigger: CTGCAGGCGCGCGTGGAGTGGACTTTCCAGCGCGCAGGGGTGACAGCCCACACCCAGGTGCTGGCAGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp TTACGGCCCTTTCTCCGCGACTCCAGGGGCAGTGACTaGAGCGCAGGCTGCGGGCGGCACATGCGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: LRPFLRDSRGSD*SAGCGRHMRRE
Trigger: CTCCCTGCGCATGTGCCGCCCGCAGCCTGCGCTGCAGTCACTGCCCCTGGAGTCGCGGAGAAAGGGCCGTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 72 bp CCTGGCGGGGAGGGCGGAGTAAGGCTCACCTGGGTGTaGGCTGTCACCCCTGCGCGCTGGAAAGTCCACTCC +
Preference number: 6 (lower is better)
Translates to: PGGEGGVRLTWV*AVTPARWKVHS
Trigger: GGAGTGGACTTTCCAGCGCGCAGGGGTGACAGCCCACACCCAGGTGAGCCTTACTCCGCCCTCCCCGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS TCA 72 bp CATGCCTGGCCGCGGGTAGGGGACGCGACCCTGGTATaGCACCCACTGGTGCATGGGCCCCTCCTTGTGTGC +
Preference number: 6 (lower is better)
Translates to: HAWPRVGDATLV*HPLVHGPLLVC
Trigger: GCACACAAGGAGGGGCCCATGCACCAGTGGGTGTCATACCAGGGTCGCGTCCCCTACCCGCGGCCAGGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000434030.1
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS TCA 72 bp TCCCCAACCCCATACCCACTCCCGCACTCACGGAGCTaGTCGAAGTGGGTGTCGCCCTCGACGCCGGGCACC +
Preference number: 6 (lower is better)
Translates to: SPTPYPLPHSRS*SKWVSPSTPGT
Trigger: GGTGCCCGGCGTCGAGGGCGACACCCACTTCGATCAGCTCCGTGAGTGCGGGAGTGGGTATGGGGTTGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000419007.5
ENST00000434030.1
ENST00000612509.4
ENST00000619119.4
CDS GCA 72 bp GCTCCTCCAGGAGCAGCCCCTCTGCGCTGGGCCTACTaGCCTTGGGGACCGAGATCACCTTCAGCACCGTGC +
Preference number: 6 (lower is better)
Translates to: APPGAAPLRWAY*PWGPRSPSAPC
Trigger: GCACGGTGCTGAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCAGCGCAGAGGGGCTGCTCCTGGAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp TGCAGCGACAGGCGACGCAGCGGTTGCGTAAAGCCCTaGTCGACGGCGGCGCACAAGTACACGCCCGAGTCC +
Preference number: 6 (lower is better)
Translates to: CSDRRRSGCVKP*STAAHKYTPES
Trigger: GGACTCGGGCGTGTACTTGTGCGCCGCCGTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCTGTCGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp GATCTGGCCAACGCGGGACACGGACAGGCGTCCCAGTaGCGGCGCCGCCTCTACCGCCGTCTCACGAAAGAA +
Preference number: 6 (lower is better)
Translates to: DLANAGHGQASQ*RRRLYRRLTKE
Trigger: TTCTTTCGTGAGACGGCGGTAGAGGCGGCGCCGGCACTGGGACGCCTGTCCGTGTCCCGCGTTGGCCAGATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000419007.5
ENST00000433753.4
ENST00000434030.1
ENST00000439487.5
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000612509.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp ACACCCACGCCACTGGGCACACCCTCAGGGTCACCCTaGACTGGCAAGCCCGCCTCACCACGTCACCCTTCC +
Preference number: 6 (lower is better)
Translates to: TPTPLGTPSGSP*TGKPASPRHPS
Trigger: GGAAGGGTGACGTGGTGAGGCGGGCTTGCCAGTGCAGGGTGACCCTGAGGGTGTGCCCAGTGGCGTGGGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619119.4
CDS CCA 72 bp TCAGGGGAGGCGGGTCGGGAGCCCCGTTGGACGCAATaGGGCCTCAGCAGCTTGTGGAGTGCAGGTGAGGGA +
Preference number: 6 (lower is better)
Translates to: SGEAGREPRWTQ*GLSSLWSAGEG
Trigger: TCCCTCACCTGCACTCCACAAGCTGCTGAGGCCCCATTGCGTCCAACGGGGCTCCCGACCCGCCTCCCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS CCA 72 bp CCACTTCCGAACCCTCCCCTCCGAGGGTGCCCCGCCTaGCCACAATCACAGACACACCCACGCCACTGGGCA +
Preference number: 6 (lower is better)
Translates to: PLPNPPLRGCPA*PQSQTHPRHWA
Trigger: TGCCCAGTGGCGTGGGTGTGTCTGTGATTGTGGCCAGGCGGGGCACCCTCGGAGGGGAGGGTTCGGAAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619119.4
CDS CAA 90 bp GGCCTGCGTAGCACTCAACACGTGCAGCGACAGGCGACGCAGCGGTaGCGTAAAGCCCTGCTCGACGGCGGCGCACAAGTACACGCCCGA +
Preference number: 6 (lower is better)
Translates to: GLRSTQHVQRQATQR*RKALLDGGAQVHAR
Trigger: TCGGGCGTGTACTTGTGCGCCGCCGTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCTGTCGCTGCACGTGTTGAGTGCTACGCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 90 bp CAGGGCTTCCGGGCCCTAGCACGCGACGGAAGAAGCAAAGAGTCATaGGGAGCCGAGGTGGAGCGGGAAAGGGGTGCCCGCAGGCGCACA +
Preference number: 6 (lower is better)
Translates to: QGFRALARDGRSKES*GAEVERERGARRRT
Trigger: TGTGCGCCTGCGGGCACCCCTTTCCCGCTCCACCTCGGCTCCCAATGACTCTTTGCTTCTTCCGTCGCGTGCTAGGGCCCGGAAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS CAA 90 bp TGCAGCTCCTCCAGGAGCAGCCCCTCTGCGCTGGGCCTACTGCCCTaGGGGACCGAGATCACCTTCAGCACCGTGCCAACGTCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: CSSSRSSPSALGLLP*GTEITFSTVPTSAG
Trigger: CCCTGCAGACGTTGGCACGGTGCTGAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCAGCGCAGAGGGGCTGCTCCTGGAGGAGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS TCA 72 bp AGGAGGCATGGGTCAGCGGGTCCTGGCCTTGCCTCCTaGTGCGAGACCCACGCGCTGCTTCCCCTTCCCGTA +
Preference number: 6 (lower is better)
Translates to: RRHGSAGPGLAS*CETHALLPLPV
Trigger: TACGGGAAGGGGAAGCAGCGCGTGGGTCTCGCATCAGGAGGCAAGGCCAGGACCCGCTGACCCATGCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000418576.3
ENST00000434030.1
ENST00000439487.5
ENST00000456210.5
ENST00000456560.6
CDS TCA 72 bp CTGGCCGCCCACGTCGTTCTTGACAAACTTGGGCTCTaGCCGCGGCAGGAGGCATGGGTCAGCGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: LAAHVVLDKLGL*PRQEAWVSGSW
Trigger: CCAGGACCCGCTGACCCATGCCTCCTGCCGCGGTCAGAGCCCAAGTTTGTCAAGAACGACGTGGGCGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418576.3
ENST00000456210.5
CDS GCA 72 bp GCAGCGCGGGACGAGACGAGTCTCCGGAGCACAACGTaGTGGGGTCGCCATTCCTTACGTCTTGCCGCCGGA +
Preference number: 6 (lower is better)
Translates to: AARDETSLRSTT*WGRHSLRLAAG
Trigger: TCCGGCGGCAAGACGTAAGGAATGGCGACCCCAGCACGTTGTGCTCCGGAGACTCGTCTCGTCCCGCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp GCAGCGAGCGGGGCTCACACTCCAGAAAGGCGCTGCTaGCCTCCACGCCGAACACCTTGTGTTCCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: AASGAHTPERRC*PPRRTPCVPAA
Trigger: CGCTGCTGGAACACAAGGTGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGGAGTGTGAGCCCCGCTCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp CGCGCCAGTCGTTCGGCCTGCGTAGCACTCAACACGTaGAGCGACAGGCGACGCAGCGGTTGCGTAAAGCCC +
Preference number: 6 (lower is better)
Translates to: RASRSACVALNT*SDRRRSGCVKP
Trigger: GGGCTTTACGCAACCGCTGCGTCGCCTGTCGCTGCACGTGTTGAGTGCTACGCAGGCCGAACGACTGGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp GGTCGCATTCCACTTCCGAACCCTCCCCTCCGAGGGTaGCCCGCCTGGCCACAATCACAGACACACCCACGC +
Preference number: 6 (lower is better)
Translates to: GRIPLPNPPLRG*PAWPQSQTHPR
Trigger: GCGTGGGTGTGTCTGTGATTGTGGCCAGGCGGGGCACCCTCGGAGGGGAGGGTTCGGAAGTGGAATGCGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619119.4
CDS CCA 72 bp GCGCGGGACGAGACGAGTCTCCGGAGCACAACGTGCTaGGGTCGCCATTCCTTACGTCTTGCCGCCGGAACC +
Preference number: 6 (lower is better)
Translates to: ARDETSLRSTTC*GRHSLRLAAGT
Trigger: GGTTCCGGCGGCAAGACGTAAGGAATGGCGACCCCAGCACGTTGTGCTCCGGAGACTCGTCTCGTCCCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 72 bp CTCTCTCGCCTGTCGTCTCCTGCTTGGTTCCCGGCGTaGGGACAGTCTGGTCACCAGTGCGTTGCGCTGCGC +
Preference number: 6 (lower is better)
Translates to: LSRLSSPAWFPA*GQSGHQCVALR
Trigger: GCGCAGCGCAACGCACTGGTGACCAGACTGTCCCCACGCCGGGAACCAAGCAGGAGACGACAGGCGAGAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CCA 72 bp GTGCAGGTGAGGGACCAAACTGGACAGGGCGGGGAGTaGGTCTGGTTGGACGGGGCTTCGTTGGGTAGGGCG +
Preference number: 6 (lower is better)
Translates to: VQVRDQTGQGGE*VWLDGASLGRA
Trigger: CGCCCTACCCAACGAAGCCCCGTCCAACCAGACCCACTCCCCGCCCTGTCCAGTTTGGTCCCTCACCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS CAA 72 bp TCCAGGAGCAGCCCCTCTGCGCTGGGCCTACTGCCCTaGGGGACCGAGATCACCTTCAGCACCGTGCCAACG +
Preference number: 6 (lower is better)
Translates to: SRSSPSALGLLP*GTEITFSTVPT
Trigger: CGTTGGCACGGTGCTGAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCAGCGCAGAGGGGCTGCTCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 72 bp CGGGCCCTAGCACGCGACGGAAGAAGCAAAGAGTCATaGGGAGCCGAGGTGGAGCGGGAAAGGGGTGCCCGC +
Preference number: 6 (lower is better)
Translates to: RALARDGRSKES*GAEVERERGAR
Trigger: GCGGGCACCCCTTTCCCGCTCCACCTCGGCTCCCAATGACTCTTTGCTTCTTCCGTCGCGTGCTAGGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS CAA 90 bp TGCAGCTCCTCCAGGAGCAGCCCCTCTGCGCTGGGCCTACTGCCCTaGGGGACCGAGATCACCTTCAGCACCGTGCCAACGTCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: CSSSRSSPSALGLLP*GTEITFSTVPTSVP
Trigger: TGGCACAGACGTTGGCACGGTGCTGAAGGTGATCTCGGTCCCCAAGGGCAGTAGGCCCAGCGCAGAGGGGCTGCTCCTGGAGGAGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 90 bp CAGCCCAGGCAAGTACTAACATGGGCTACAGGGACCTGGGGGCCCTaGCTGACCAGCCCAGGCCTCACGAGGGTGGGTGTCTGGGGAAGC +
Preference number: 6 (lower is better)
Translates to: QPRQVLTWATGTWGP*LTSPGLTRVGVWGS
Trigger: GCTTCCCCAGACACCCACCCTCGTGAGGCCTGGGCTGGTCAGCAAGGGCCCCCAGGTCCCTGTAGCCCATGTTAGTACTTGCCTGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441915.5
CDS TCA 72 bp GACCTTAATGGGAGGGTCGAGGGCGGGTCTTCTCCTTaGTTCAGGGGAGGCGGGTCGGGAGCCCCGTTGGAC +
Preference number: 6 (lower is better)
Translates to: DLNGRVEGGSSP*FRGGGSGAPLD
Trigger: GTCCAACGGGGCTCCCGACCCGCCTCCCCTGAATCAAGGAGAAGACCCGCCCTCGACCCTCCCATTAAGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS GCA 72 bp CCTGCAGCGAGCGGGGCTCACACTCCAGAAAGGCGCTaGTGCCCTCCACGCCGAACACCTTGTGTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: PAASGAHTPERR*CPPRRTPCVPA
Trigger: TGCTGGAACACAAGGTGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGGAGTGTGAGCCCCGCTCGCTGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp GCACTCAACACGTGCAGCGACAGGCGACGCAGCGGTTaGGTAAAGCCCTGCTCGACGGCGGCGCACAAGTAC +
Preference number: 6 (lower is better)
Translates to: ALNTCSDRRRSG*VKPCSTAAHKY
Trigger: GTACTTGTGCGCCGCCGTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCTGTCGCTGCACGTGTTGAGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp CTCACCACCCCCAGACCTCAGCCACCTCGACCTCCCTaGCCTCATCCCAGCCAGAACAGGCAGGCCTCTGTT +
Preference number: 6 (lower is better)
Translates to: LTTPRPQPPRPP*PHPSQNRQASV
Trigger: AACAGAGGCCTGCCTGTTCTGGCTGGGATGAGGGCAGGGAGGTCGAGGTGGCTGAGGTCTGGGGGTGGTGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441915.5
CDS CCA 72 bp GAGCCCCGTTGGACGCAATGGGGCCTCAGCAGCTTGTaGAGTGCAGGTGAGGGACCAAACTGGACAGGGCGG +
Preference number: 6 (lower is better)
Translates to: EPRWTQWGLSSL*SAGEGPNWTGR
Trigger: CCGCCCTGTCCAGTTTGGTCCCTCACCTGCACTCCACAAGCTGCTGAGGCCCCATTGCGTCCAACGGGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS CCA 72 bp CAGCCCAGGCAAGTACTAACATGGGCTACAGGGACCTaGGGGCCCTTGCTGACCAGCCCAGGCCTCACGAGG +
Preference number: 6 (lower is better)
Translates to: QPRQVLTWATGT*GPLLTSPGLTR
Trigger: CCTCGTGAGGCCTGGGCTGGTCAGCAAGGGCCCCCAGGTCCCTGTAGCCCATGTTAGTACTTGCCTGGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441915.5
CDS CAA 72 bp CCCTGGTATGACACCCACTGGTGCATGGGCCCCTCCTaGTGTGCAAAGGGTCCCAAGAAGGCCCGGCGCACG +
Preference number: 6 (lower is better)
Translates to: PWYDTHWCMGPS*CAKGPKKARRT
Trigger: CGTGCGCCGGGCCTTCTTGGGACCCTTTGCACACAAGGAGGGGCCCATGCACCAGTGGGTGTCATACCAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000434030.1
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 72 bp TCCAGAAAGGCGCTGCTGCCCTCCACGCCGAACACCTaGTGTTCCAGCAGCGCGGGACGAGACGAGTCTCCG +
Preference number: 6 (lower is better)
Translates to: SRKALLPSTPNT*CSSSAGRDESP
Trigger: CGGAGACTCGTCTCGTCCCGCGCTGCTGGAACACAAGGTGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 90 bp GGGACGCGACCCTGGTATGACACCCACTGGTGCATGGGCCCCTCCTaGTGTGCAAAGGGTCCCAAGAAGGCCCGGCGCACGTCGTTCATG +
Preference number: 6 (lower is better)
Translates to: GTRPWYDTHWCMGPS*CAKGPKKARRTSFM
Trigger: CATGAACGACGTGCGCCGGGCCTTCTTGGGACCCTTTGCACACAAGGAGGGGCCCATGCACCAGTGGGTGTCATACCAGGGTCGCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000434030.1
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 90 bp GGCTCACACTCCAGAAAGGCGCTGCTGCCCTCCACGCCGAACACCTaGTGTTCCAGCAGCGCGGGACGAGACGAGTCTCCGGAGCACAAC +
Preference number: 6 (lower is better)
Translates to: GSHSRKALLPSTPNT*CSSSAGRDESPEHN
Trigger: GTTGTGCTCCGGAGACTCGTCTCGTCCCGCGCTGCTGGAACACAAGGTGTTCGGCGTGGAGGGCAGCAGCGCCTTTCTGGAGTGTGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp GAGCACAACGTGCTGGGGTCGCCATTCCTTACGTCTTaGCGCCGGAACCGCCTCTTGGCACTGGGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: EHNVLGSPFLTS*RRNRLLALGWK
Trigger: CTTCCAGCCCAGTGCCAAGAGGCGGTTCCGGCGGCAAGACGTAAGGAATGGCGACCCCAGCACGTTGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp AGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTCCTaGTTGGTTCCCGGCGTGGGGACAGTCTGGTCACCA +
Preference number: 6 (lower is better)
Translates to: RVCLAPLSPVVS*LVPGVGTVWSP
Trigger: TGGTGACCAGACTGTCCCCACGCCGGGAACCAAGCAGGAGACGACAGGCGAGAGAGGAGCCAGACAGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp GCCTCACGAGGGTGGGTGTCTGGGGAAGCACAGGCCTaGAAAGCCTCCCATGACTCAGAGGCACCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: ASRGWVSGEAQA*KASHDSEAPQK
Trigger: CTTCTGGGGTGCCTCTGAGTCATGGGAGGCTTTGCAGGCCTGTGCTTCCCCAGACACCCACCCTCGTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441915.5
CDS CCA 72 bp CCCGGGACTGCAAACTACCAAAAGGGGCCAGAGGCTTaGGACGCGCCAGGCACAAGCTCAGTCCATCCCACC +
Preference number: 6 (lower is better)
Translates to: PGTANYQKGPEA*DAPGTSSVHPT
Trigger: GGTGGGATGGACTGAGCTTGTGCCTGGCGCGTCCCAAGCCTCTGGCCCCTTTTGGTAGTTTGCAGTCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416295.1
ENST00000419007.5
CDS CAA 72 bp GGAGCACAACGTGCTGGGGTCGCCATTCCTTACGTCTaGCCGCCGGAACCGCCTCTTGGCACTGGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: GAQRAGVAIPYV*PPEPPLGTGLE
Trigger: TTCCAGCCCAGTGCCAAGAGGCGGTTCCGGCGGCAAGACGTAAGGAATGGCGACCCCAGCACGTTGTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000416295.1
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 72 bp AGCACTCAACACGTGCAGCGACAGGCGACGCAGCGGTaGCGTAAAGCCCTGCTCGACGGCGGCGCACAAGTA +
Preference number: 6 (lower is better)
Translates to: STQHVQRQATQR*RKALLDGGAQV
Trigger: TACTTGTGCGCCGCCGTCGAGCAGGGCTTTACGCAACCGCTGCGTCGCCTGTCGCTGCACGTGTTGAGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 72 bp CAAGTACTAACATGGGCTACAGGGACCTGGGGGCCCTaGCTGACCAGCCCAGGCCTCACGAGGGTGGGTGTC +
Preference number: 6 (lower is better)
Translates to: QVLTWATGTWGP*LTSPGLTRVGV
Trigger: GACACCCACCCTCGTGAGGCCTGGGCTGGTCAGCAAGGGCCCCCAGGTCCCTGTAGCCCATGTTAGTACTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441915.5
CDS CAA 90 bp AGCTCAGGGTGCTCAGGGTTCAGCGGGTGTGTGTGTGGAGGAGCCTaGAGCTGCCCTGGACTCTGCCCCAGGATCGCTGCCTCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: SSGCSGFSGCVCGGA*SCPGLCPRIAASSQ
Trigger: CTGAGAAGAGGCAGCGATCCTGGGGCAGAGTCCAGGGCAGCTCAAGGCTCCTCCACACACACACCCGCTGAACCCTGAGCACCCTGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618865.4
ENST00000621029.4
CDS CAA 90 bp CTTTTCAGGGTCTGTCTGGCTCCTCTCTCGCCTGTCGTCTCCTGCTaGGTTCCCGGCGTGGGGACAGTCTGGTCACCAGTGCGTTGCGCT +
Preference number: 6 (lower is better)
Translates to: LFRVCLAPLSPVVSC*VPGVGTVWSPVRCA
Trigger: AGCGCAACGCACTGGTGACCAGACTGTCCCCACGCCGGGAACCAAGCAGGAGACGACAGGCGAGAGAGGAGCCAGACAGACCCTGAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp CAAAGGGTCCCAAGAAGGCCCGGCGCACGTCGTTCATaGTGTACACGCACACCGCAGAGCCCTGGAAGATGC +
Preference number: 6 (lower is better)
Translates to: QRVPRRPGARRS*CTRTPQSPGRC
Trigger: GCATCTTCCAGGGCTCTGCGGTGTGCGTGTACAGCATGAACGACGTGCGCCGGGCCTTCTTGGGACCCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000434030.1
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 72 bp ACCCGGGACTGCAAACTACCAAAAGGGGCCAGAGGCTaGGGACGCGCCAGGCACAAGCTCAGTCCATCCCAC +
Preference number: 6 (lower is better)
Translates to: TRDCKLPKGARG*GRARHKLSPSH
Trigger: GTGGGATGGACTGAGCTTGTGCCTGGCGCGTCCCAAGCCTCTGGCCCCTTTTGGTAGTTTGCAGTCCCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416295.1
ENST00000419007.5
CDS CAA 72 bp CTGGGGTTGGGAGTCCCTGGCACCTTCTTGGCCCGCTaGCTGATGTTGTCCAGGTTGAGGGAGGCCACATGG +
Preference number: 6 (lower is better)
Translates to: LGLGVPGTFLAR*LMLSRLREATW
Trigger: CCATGTGGCCTCCCTCAACCTGGACAACATCAGCAAGCGGGCCAAGAAGGTGCCAGGGACTCCCAACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612509.4
CDS CAA 90 bp CTGGGGTTGGGAGTCCCTGGCACCTTCTTGGCCCGCTTGCTGATGTaGTCCAGGTTGAGGGAGGCCACATGGTTCTCGGCACCCACAAAC +
Preference number: 6 (lower is better)
Translates to: LGLGVPGTFLARLLM*SRLREATWFSAPTN
Trigger: GTTTGTGGGTGCCGAGAACCATGTGGCCTCCCTCAACCTGGACAACATCAGCAAGCGGGCCAAGAAGGTGCCAGGGACTCCCAACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612509.4
CDS TCA 72 bp GAAGAAATTTGCATGCTGGTGACAGCGGCCGAGTCCTaGGAGGGAGGAGGGGCGACGGGGTCAGGGCTTAGT +
Preference number: 6 (lower is better)
Translates to: EEICMLVTAAES*EGGGATGSGLS
Trigger: ACTAAGCCCTGACCCCGTCGCCCCTCCTCCCTCTCAGGACTCGGCCGCTGTCACCAGCATGCAAATTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS TCA 72 bp CTCCGGGATCCAAAATACCTTGACAAACTTGGGCTCTaGCCGCGGCAGGAGGCATGGGTCAGCGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: LRDPKYLDKLGL*PRQEAWVSGSW
Trigger: CCAGGACCCGCTGACCCATGCCTCCTGCCGCGGTCAGAGCCCAAGTTTGTCAAGGTATTTTGGATCCCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434030.1
ENST00000439487.5
ENST00000456560.6
CDS TCA 72 bp CCAGCAAGGCCTGGTAGCAGCAGGTTCGCTCCAGGCTaGAAGTCTGGAGACCATGCCAGGCCTGGAGCTCTT +
Preference number: 6 (lower is better)
Translates to: PARPGSSRFAPG*KSGDHARPGAL
Trigger: AAGAGCTCCAGGCCTGGCATGGTCTCCAGACTTTCAGCCTGGAGCGAACCTGCTGCTACCAGGCCTTGCTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000433753.4
ENST00000611067.4
ENST00000612509.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
ENST00000621029.4
CDS GCA 72 bp TCATGCACTCAGTACCAATGTCCTTCCCTGCCCAGTTaGACTCCTCTCGCCATTCCACAGGGGCCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SCTQYQCPSLPS*TPLAIPQGPAR
Trigger: CCTGGCCGGCCCCTGTGGAATGGCGAGAGGAGTGCAACTGGGCAGGGAAGGACATTGGTACTGAGTGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433753.4
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
ENST00000621029.4
CDS CCA 72 bp CGCTTGCTGATGTTGTCCAGGTTGAGGGAGGCCACATaGTTCTCGGCACCCACAAACAGGCGTCCACGCTCC +
Preference number: 6 (lower is better)
Translates to: RLLMLSRLREAT*FSAPTNRRPRS
Trigger: GGAGCGTGGACGCCTGTTTGTGGGTGCCGAGAACCATGTGGCCTCCCTCAACCTGGACAACATCAGCAAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000433753.4
ENST00000611067.4
ENST00000612509.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
ENST00000621029.4
CDS CCA 72 bp GAAGTTCATGCACTCAGTCTCAGGGAGCCATTCCTCTaGGTCTCTCCAGGCTGGAGTGGGGTCCCAGGGCTC +
Preference number: 6 (lower is better)
Translates to: EVHALSLREPFL*VSPGWSGVPGL
Trigger: GAGCCCTGGGACCCCACTCCAGCCTGGAGAGACCCAGAGGAATGGCTCCCTGAGACTGAGTGCATGAACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612509.4
CDS CAA 72 bp GGAGTCCCTGGCACCTTCTTGGCCCGCTTGCTGATGTaGTCCAGGTTGAGGGAGGCCACATGGTTCTCGGCA +
Preference number: 6 (lower is better)
Translates to: GVPGTFLARLLM*SRLREATWFSA
Trigger: TGCCGAGAACCATGTGGCCTCCCTCAACCTGGACAACATCAGCAAGCGGGCCAAGAAGGTGCCAGGGACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612509.4
CDS CAA 90 bp AGGGGGTGGTTCCGCGCAAACTGGATGACATCGTCTGGGAAGTCCTaGGTGGAACTGAAGGTGCCAAAGGTCTTGCTGGGGCACTGGGGG +
Preference number: 6 (lower is better)
Translates to: RGWFRANWMTSSGKS*VELKVPKVLLGHWG
Trigger: CCCCCAGTGCCCCAGCAAGACCTTTGGCACCTTCAGTTCCACCAAGGACTTCCCAGACGATGTCATCCAGTTTGCGCGGAACCACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS TCA 72 bp GCTCCCGGACAGCTGGGGCTAGTGTCTCCTCGCCTTTaGGGCGTCTACCCTCAGCATGTTTGGGTTGTGAAG +
Preference number: 6 (lower is better)
Translates to: APGQLGLVSPRL*GVYPQHVWVVK
Trigger: CTTCACAACCCAAACATGCTGAGGGTAGACGCCTCAAAGGCGAGGAGACACTAGCCCCAGCTGTCCGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS GCA 72 bp ACGTCTGCAGGGATGAGAAGGGGTAATGACCATTGGTaGTCCCGGACAGCTGGGGCTAGTGTCTCCTCGCCT +
Preference number: 6 (lower is better)
Translates to: TSAGMRRGNDHW*SRTAGASVSSP
Trigger: AGGCGAGGAGACACTAGCCCCAGCTGTCCGGGAGCACCAATGGTCATTACCCCTTCTCATCCCTGCAGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS GCA 72 bp CTTCCACAAAGGCACAGGTTGGGTGGAAGGCTCCCGTaGCACAGGCCAGCAAATGGGTGCGGTTGTAGGCAT +
Preference number: 6 (lower is better)
Translates to: LPQRHRLGGRLP*HRPANGCGCRH
Trigger: ATGCCTACAACCGCACCCATTTGCTGGCCTGTGGCACGGGAGCCTTCCACCCAACCTGTGCCTTTGTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000433753.4
ENST00000441915.5
ENST00000611067.4
ENST00000612509.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
ENST00000621029.4
CDS GCA 72 bp CGTCTTGCCGCCGGAACCGCCCTCTTGGAAGAAATTTaGATGCTGGTGACAGCGGCCGAGTCCTCAAACACG +
Preference number: 6 (lower is better)
Translates to: RLAAGTALLEEI*MLVTAAESSNT
Trigger: CGTGTTTGAGGACTCGGCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAGGGCGGTTCCGGCGGCAAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456210.5
CDS CCA 72 bp CCAACGTCTGCAGGGATGAGAAGGGGTAATGACCATTaGTGCTCCCGGACAGCTGGGGCTAGTGTCTCCTCG +
Preference number: 6 (lower is better)
Translates to: PTSAGMRRGNDH*CSRTAGASVSS
Trigger: CGAGGAGACACTAGCCCCAGCTGTCCGGGAGCACCAATGGTCATTACCCCTTCTCATCCCTGCAGACGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS CAA 72 bp TTCATGCACTCAGTACCAATGTCCTTCCCTGCCCAGTaGCACTCCTCTCGCCATTCCACAGGGGCCGGCCAG +
Preference number: 6 (lower is better)
Translates to: FMHSVPMSFPAQ*HSSRHSTGAGQ
Trigger: CTGGCCGGCCCCTGTGGAATGGCGAGAGGAGTGCAACTGGGCAGGGAAGGACATTGGTACTGAGTGCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433753.4
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
ENST00000621029.4
CDS CAA 90 bp GCTCAGTCCATCCCACCCCGACCCCCATCCTGGTCACTCACCCTCTaGGAAGAAATTTGCATGCTGGTGACAGCGGCCGAGTCCTCAAAC +
Preference number: 6 (lower is better)
Translates to: AQSIPPRPPSWSLTL*EEICMLVTAAESSN
Trigger: GTTTGAGGACTCGGCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAGGGTGAGTGACCAGGATGGGGGTCGGGGTGGGATGGACTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS CAA 90 bp AGGGGGTGGTTCCGCGCAAACTGGATGACATCGTCTGGGAAGTCCTaGGTGGAACTGAAGGTGCCAAAGGTCTTGCTGGGGCAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: RGWFRANWMTSSGKS*VELKVPKVLLGQEL
Trigger: CAGCTCCTGCCCCAGCAAGACCTTTGGCACCTTCAGTTCCACCAAGGACTTCCCAGACGATGTCATCCAGTTTGCGCGGAACCACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439487.5
ENST00000456210.5
CDS CAA 90 bp TTCACGAAGTTCATGCACTCAGTACCAATGTCCTTCCCTGCCCAGTaGCACTCCTCTCGCCATTCCACAGGGGCCGGCCAGGCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: FTKFMHSVPMSFPAQ*HSSRHSTGAGQASF
Trigger: GAAGCTGGCCTGGCCGGCCCCTGTGGAATGGCGAGAGGAGTGCAACTGGGCAGGGAAGGACATTGGTACTGAGTGCATGAACTTCGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433753.4
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
ENST00000621029.4
CDS CAA 90 bp AGGGGGTGGTTCCGCGCAAACTGGATGACATCGTCTGGGAAGTCCTaGGTGGAACTGAAGGTGCCAAAGGTCTTGCTGGGGCACATGCCT +
Preference number: 6 (lower is better)
Translates to: RGWFRANWMTSSGKS*VELKVPKVLLGHMP
Trigger: AGGCATGTGCCCCAGCAAGACCTTTGGCACCTTCAGTTCCACCAAGGACTTCCCAGACGATGTCATCCAGTTTGCGCGGAACCACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 90 bp GACCATTGGTGCTCCCGGACAGCTGGGGCTAGTGTCTCCTCGCCTTaGAGGCGTCTACCCTCAGCATGTTTGGGTTGTGAAGAGTGTGGA +
Preference number: 6 (lower is better)
Translates to: DHWCSRTAGASVSSP*RRLPSACLGCEECG
Trigger: TCCACACTCTTCACAACCCAAACATGCTGAGGGTAGACGCCTCAAAGGCGAGGAGACACTAGCCCCAGCTGTCCGGGAGCACCAATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS TCA 72 bp CGTCTGGGTTCTCGCTCTCCGGGATCCAAAATACCTTaGCAAACTTGGGCTCTGACCGCGGCAGGAGGCATG +
Preference number: 6 (lower is better)
Translates to: RLGSRSPGSKIP*QTWALTAAGGM
Trigger: CATGCCTCCTGCCGCGGTCAGAGCCCAAGTTTGTCAAGGTATTTTGGATCCCGGAGAGCGAGAACCCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434030.1
ENST00000439487.5
ENST00000456560.6
CDS TCA 72 bp CCGGAACCGCCCTCTTGGAAGAAATTTGCATGCTGGTaGCAGCGGCCGAGTCCTCAAACACGTGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: PEPPSWKKFACW*QRPSPQTRAAP
Trigger: AGGAGCTGCACGTGTTTGAGGACTCGGCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAGGGCGGTTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456210.5
CDS GCA 72 bp CGGGAGTCGTGTGGCTCTGTTCGGAGACTTGGACGTTaGCCTAGGCTGCGAAAGATGGTAAAGTCTCGTCCC +
Preference number: 6 (lower is better)
Translates to: RESCGSVRRLGR*PRLRKMVKSRP
Trigger: GGGACGAGACTTTACCATCTTTCGCAGCCTAGGGCAACGTCCAAGTCTCCGAACAGAGCCACACGACTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000433753.4
ENST00000441915.5
ENST00000611067.4
ENST00000612509.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 72 bp GAAAGGGAGGCACAGCAGGGATATAGATATGGGGGCTaGATAGGCAGCCCTCCATGCCCAGCCTCTGGGAAC +
Preference number: 6 (lower is better)
Translates to: EREAQQGYRYGG*IGSPPCPASGN
Trigger: GTTCCCAGAGGCTGGGCATGGAGGGCTGCCTATCAAGCCCCCATATCTATATCCCTGCTGTGCCTCCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS CAA 72 bp TGCTCCCGGACAGCTGGGGCTAGTGTCTCCTCGCCTTaGAGGCGTCTACCCTCAGCATGTTTGGGTTGTGAA +
Preference number: 6 (lower is better)
Translates to: CSRTAGASVSSP*RRLPSACLGCE
Trigger: TTCACAACCCAAACATGCTGAGGGTAGACGCCTCAAAGGCGAGGAGACACTAGCCCCAGCTGTCCGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS CAA 72 bp ACGTCTTGCCGCCGGAACCGCCCTCTTGGAAGAAATTaGCATGCTGGTGACAGCGGCCGAGTCCTCAAACAC +
Preference number: 6 (lower is better)
Translates to: TSCRRNRPLGRN*HAGDSGRVLKH
Trigger: GTGTTTGAGGACTCGGCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAGGGCGGTTCCGGCGGCAAGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456210.5
CDS CAA 72 bp GGAGCACAACGTGCTGGGGTCGCCATTCCTTACGTCTaGCCGCCGGAACCGCCCTCTTGGAAGAAATTTGCA +
Preference number: 6 (lower is better)
Translates to: GAQRAGVAIPYV*PPEPPSWKKFA
Trigger: TGCAAATTTCTTCCAAGAGGGCGGTTCCGGCGGCAAGACGTAAGGAATGGCGACCCCAGCACGTTGTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456210.5
CDS TCA 72 bp AGATCACCTTCAGCACCGTGCCAACGTCTGCAGGGATaGGAAGGGGTAATGACCATTGGTGCTCCCGGACAG +
Preference number: 6 (lower is better)
Translates to: RSPSAPCQRLQG*EGVMTIGAPGQ
Trigger: CTGTCCGGGAGCACCAATGGTCATTACCCCTTCTCATCCCTGCAGACGTTGGCACGGTGCTGAAGGTGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS GCA 72 bp GCCAATGAAGAGGACGTCATAGTGTCCGTCAGCGGCTaGAACCCGGTCCGCGGCAATTTGAGTGAAGGTGTA +
Preference number: 6 (lower is better)
Translates to: ANEEDVIVSVSG*NPVRGNLSEGV
Trigger: TACACCTTCACTCAAATTGCCGCGGACCGGGTTGCAGCCGCTGACGGACACTATGACGTCCTCTTCATTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS GCA 72 bp CACGAAGTTCATGCACTCAGTACCAATGTCCTTCCCTaGCCAGTTGCACTCCTCTCGCCATTCCACAGGGGC +
Preference number: 6 (lower is better)
Translates to: HEVHALSTNVLP*PVALLSPFHRG
Trigger: GCCCCTGTGGAATGGCGAGAGGAGTGCAACTGGGCAGGGAAGGACATTGGTACTGAGTGCATGAACTTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433753.4
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
ENST00000621029.4
CDS GCA 72 bp GAGCACAACGTGCTGGGGTCGCCATTCCTTACGTCTTaGCGCCGGAACCGCCCTCTTGGAAGAAATTTGCAT +
Preference number: 6 (lower is better)
Translates to: EHNVLGSPFLTS*RRNRPLGRNLH
Trigger: ATGCAAATTTCTTCCAAGAGGGCGGTTCCGGCGGCAAGACGTAAGGAATGGCGACCCCAGCACGTTGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456210.5
CDS CAA 72 bp TCGTCTGGGTTCTCGCTCTCCGGGATCCAAAATACCTaGACAAACTTGGGCTCTGACCGCGGCAGGAGGCAT +
Preference number: 6 (lower is better)
Translates to: SSGFSLSGIQNT*TNLGSDRGRRH
Trigger: ATGCCTCCTGCCGCGGTCAGAGCCCAAGTTTGTCAAGGTATTTTGGATCCCGGAGAGCGAGAACCCAGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434030.1
ENST00000439487.5
ENST00000456560.6
CDS TCA 72 bp ACAGCTGGTGCCTCTTGGAAGAAATTTGCATGCTGGTaGCAGCGGCCGAGTCCTCAAACACGTGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: TAGASWKKFACW*QRPSPQTRAAP
Trigger: AGGAGCTGCACGTGTTTGAGGACTCGGCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAGGCACCAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS TCA 72 bp GCCTTTGAGGCGTCTACCCTCAGCATGTTTGGGTTGTaGAGAGTGTGGACTGGAAGAGTGTGGGTTGGGCAG +
Preference number: 6 (lower is better)
Translates to: AFEASTLSMFGL*RVWTGRVWVGQ
Trigger: CTGCCCAACCCACACTCTTCCAGTCCACACTCTTCACAACCCAAACATGCTGAGGGTAGACGCCTCAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS TCA 72 bp GGTCACTCACCCTCTTGGAAGAAATTTGCATGCTGGTaGCAGCGGCCGAGTCCTCAAACACGTGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: GHSPSWKKFACW*QRPSPQTRAAP
Trigger: AGGAGCTGCACGTGTTTGAGGACTCGGCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAGGGTGAGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416295.1
CDS TCA 72 bp GAAGTTCATGCACTCAGTCTAGTAGGGTTGGAGGTGTaGGGCTTCCCCCAGGGACGTAGCCTTAAGAGGTCC +
Preference number: 6 (lower is better)
Translates to: EVHALSLVGLEV*GFPQGRSLKRS
Trigger: GGACCTCTTAAGGCTACGTCCCTGGGGGAAGCCTCACACCTCCAACCCTACTAGACTGAGTGCATGAACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441915.5
CDS GCA 72 bp TCTAACAAAGCCAGAGCCTGTACTCAAACCCGGGACTaGAAACTACCAAAAGGGGCCAGAGGCTTGGGACGC +
Preference number: 6 (lower is better)
Translates to: SNKARACTQTRD*KLPKGARGLGR
Trigger: GCGTCCCAAGCCTCTGGCCCCTTTTGGTAGTTTGCAGTCCCGGGTTTGAGTACAGGCTCTGGCTTTGTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416295.1
ENST00000419007.5
CDS CCA 72 bp GGGTGCCCGCAGGCGCACATTTTAAGGCTGAGTGTTTaGGAGCTGGTGGTCTTCAAGGGAGAATCCGAAAGA +
Preference number: 6 (lower is better)
Translates to: GCPQAHILRLSV*ELVVFKGESER
Trigger: TCTTTCGGATTCTCCCTTGAAGACCACCAGCTCCCAAACACTCAGCCTTAAAATGTGCGCCTGCGGGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419007.5
CDS CAA 72 bp TTCCGCGCAAACTGGATGACATCGTCTGGGAAGTCCTaGGTGGAACTGAAGGTGCCAAAGGTCTTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: FRANWMTSSGKS*VELKVPKVLLG
Trigger: CCCCAGCAAGACCTTTGGCACCTTCAGTTCCACCAAGGACTTCCCAGACGATGTCATCCAGTTTGCGCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000418576.3
ENST00000419007.5
ENST00000433753.4
ENST00000439487.5
ENST00000441915.5
ENST00000456210.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 72 bp CGAGGCTACGTACAGCTGGTGCCTCTTGGAAGAAATTaGCATGCTGGTGACAGCGGCCGAGTCCTCAAACAC +
Preference number: 6 (lower is better)
Translates to: RGYVQLVPLGRN*HAGDSGRVLKH
Trigger: GTGTTTGAGGACTCGGCCGCTGTCACCAGCATGCAAATTTCTTCCAAGAGGCACCAGCTGTACGTAGCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000418576.3
ENST00000433753.4
ENST00000441915.5
ENST00000456560.6
ENST00000611067.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS CAA 72 bp TCGTCTGGGTTCTCGCTCTCCGGGATCCAAAATACCTaGACAAACTTGGGCTCATTGAGCCAGCGGGAGTCG +
Preference number: 6 (lower is better)
Translates to: SSGFSLSGIQNT*TNLGSLSQRES
Trigger: CGACTCCCGCTGGCTCAATGAGCCCAAGTTTGTCAAGGTATTTTGGATCCCGGAGAGCGAGAACCCAGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000433753.4
ENST00000441915.5
ENST00000611067.4
ENST00000612509.4
ENST00000616701.5
ENST00000618865.4
ENST00000619119.4
CDS TCA 72 bp TCACCAAGAAGACCCCAGGCCAAGTTCTCAAACCCTTaGGGCTTTGAAGTGGGTTGTAGCAGAAGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: SPRRPQAKFSNP*GFEVGCSRSPW
Trigger: CCAGGGACTTCTGCTACAACCCACTTCAAAGCCTCAAGGGTTTGAGAACTTGGCCTGGGGTCTTCTTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419007.5
ENST00000434030.1
CDS GCA 72 bp TGCGGTTGTAGGCATGCAGCAACTTCACGAAGTTCATaGACTCAGTCTAGTAGGGTTGGAGGTGTGAGGCTT +
Preference number: 6 (lower is better)
Translates to: CGCRHAATSRSS*TQSSRVGGVRL
Trigger: AAGCCTCACACCTCCAACCCTACTAGACTGAGTGCATGAACTTCGTGAAGTTGCTGCATGCCTACAACCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441915.5