RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000127922

Ensembl transcript IDs: ENST00000248566.3, ENST00000356686.2, ENST00000413065.5, ENST00000444799.5, ENST00000449279.5, ENST00000466986.5, ENST00000476463.1, ENST00000482389.1, ENST00000488005.5, ENST00000493858.5, ENST00000606019.5, ENST00000611360.4, ENST00000613919.4, ENST00000615352.4, ENST00000616956.1, ENST00000617133.4, ENST00000618028.4, ENST00000618105.4, ENST00000619259.4, ENST00000622128.1, ENST00000622838.4, ENST00000623498.3, ENST00000623693.3

Found 513 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTTTGCAAAGGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTaGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTT +
Preference number: 1 (lower is better)
Translates to: ALQRPDAYSHGSRVL*PAELGFLCWVSSPF
Trigger: AAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCTTTGCAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466986.5
3UTR TCA 90 bp AAGGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTaGGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCA +
Preference number: 1 (lower is better)
Translates to: KAGCLLSWIQGPLAR*AGLLMLGLLPLFMP
Trigger: TGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000466986.5
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR GCA 90 bp GCTAACCATAATCCTACCTTGCCCAGGCTGGACCTTCACCCAGGCTaGTCTCTTTGCCTGAAATGCTGTAGCACCACCCCACTCCCTCCT +
Preference number: 1 (lower is better)
Translates to: ANHNPTLPRLDLHPG*SLCLKCCSTTPLPP
Trigger: AGGAGGGAGTGGGGTGGTGCTACAGCATTTCAGGCAAAGAGAGCAGCCTGGGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
3UTR CCA 90 bp CGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTaGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTT +
Preference number: 1 (lower is better)
Translates to: RMLTLMDPGSSGPLS*ASYAGSPPPFYAML
Trigger: AAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR CCA 90 bp AGAAGACAGGATTTCATCTCTGAAAGGGAACAGGTTCCAGCCTCCTaGGCATGTTCTCCAGGCAGTAGATGGGCACCTCGCCCAATGTGT +
Preference number: 1 (lower is better)
Translates to: RRQDFISEREQVPAS*ACSPGSRWAPRPMC
Trigger: ACACATTGGGCGAGGTGCCCATCTACTGCCTGGAGAACATGCCCAGGAGGCTGGAACCTGTTCCCTTTCAGAGATGAAATCCTGTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR GCA 90 bp TGTTGTCGCTCTGGAGTTGGGCATCTCCAAGTTTATCTGTTGCTTTaGAAAGGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGC +
Preference number: 1 (lower is better)
Translates to: CCRSGVGHLQVYLLL*KGRMLTLMDPGSSG
Trigger: GCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCTTTGCAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAGAGCGACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
3UTR TCA 90 bp GCACCACCCCACTCCCTCCTTACTGACTCCATGCACATATCCACATaGCTAGTGCTCAATAATAGCTCTCCAATCCTGTGCATCCCAGCT +
Preference number: 1 (lower is better)
Translates to: APPHSLLTDSMHIST*LVLNNSSPILCIPA
Trigger: AGCTGGGATGCACAGGATTGGAGAGCTATTATTGAGCACTAGTCATGTGGATATGTGCATGGAGTCAGTAAGGAGGGAGTGGGGTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
3UTR GCA 90 bp CTATATGCATACCTTTTCCCTGTCCTCTGTCCTGCCCCTGCAAGATaGAATAACACTTCCTCTTCTACAGGGTCAGGCACCTGGTCACCA +
Preference number: 1 (lower is better)
Translates to: LYAYLFPVLCPAPAR*NNTSSSTGSGTWSP
Trigger: TGGTGACCAGGTGCCTGACCCTGTAGAAGAGGAAGTGTTATTGCATCTTGCAGGGGCAGGACAGAGGACAGGGAAAAGGTATGCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449279.5
3UTR GCA 90 bp CCCATTTTGGGATCTCAGATGGAAATGCAGAAATCACCCATCTTCTaGGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGTTCCTATTC +
Preference number: 1 (lower is better)
Translates to: PILGSQMEMQKSPIF*VAHAGSCRLELFLF
Trigger: GAATAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGATGGGTGATTTCTGCATTTCCATCTGAGATCCCAAAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613919.4
3UTR GCA 90 bp AACTCTGTTGTCGCTCTGGAGTTGGGCATCTCCAAGTTTATCTGTTaGTTTGCAAAGGCCGGATGCTTACTCTCATGGATCCAGGGTCCT +
Preference number: 1 (lower is better)
Translates to: NSVVALELGISKFIC*FAKAGCLLSWIQGP
Trigger: AGGACCCTGGATCCATGAGAGTAAGCATCCGGCCTTTGCAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
3UTR TCA 90 bp GTGACTAATAGGAGAACTAGGGGTGATGCTTCTGTAGTTCTCGTGTaGGTTAATGAAGGCCTGGACTCTGGGAATGGAGGTGGGCATCTT +
Preference number: 1 (lower is better)
Translates to: VTNRRTRGDASVVLV*VNEGLDSGNGGGHL
Trigger: AAGATGCCCACCTCCATTCCCAGAGTCCAGGCCTTCATTAACTCACACGAGAACTACAGAAGCATCACCCCTAGTTCTCCTATTAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623498.3
3UTR GCA 90 bp CCTGAGCAGTGTGGTCATGAGAGTGATGTTAAGTGTTATAGACTATaGTGGGCCAGCTCTGAGTGCCACATCCTGAGTGATAAAGGCATC +
Preference number: 1 (lower is better)
Translates to: PEQCGHESDVKCYRL*WASSECHILSDKGI
Trigger: GATGCCTTTATCACTCAGGATGTGGCACTCAGAGCTGGCCCAGCATAGTCTATAACACTTAACATCACTCTCATGACCACACTGCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CCA 90 bp GAGCAGTGTGGTCATGAGAGTGATGTTAAGTGTTATAGACTATGCTaGGCCAGCTCTGAGTGCCACATCCTGAGTGATAAAGGCATCTGT +
Preference number: 1 (lower is better)
Translates to: EQCGHESDVKCYRLC*ASSECHILSDKGIC
Trigger: ACAGATGCCTTTATCACTCAGGATGTGGCACTCAGAGCTGGCCCAGCATAGTCTATAACACTTAACATCACTCTCATGACCACACTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CCA 90 bp AGAGACCGGAGCATGCTCAAAGAACTGCAAAGAGTGTTCCATGACTaGAGCACAGGGAGTGGGCACACTCTTGAGAGCTTAAGTTTATAT +
Preference number: 1 (lower is better)
Translates to: RDRSMLKELQRVFHD*STGSGHTLESLSLY
Trigger: ATATAAACTTAAGCTCTCAAGAGTGTGCCCACTCCCTGTGCTCCAGTCATGGAACACTCTTTGCAGTTCTTTGAGCATGCTCCGGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623693.3
3UTR TCA 90 bp CGGTCCAATCCTTTGGACTTTAAGACAGCTAATCTTGACCAACACTaGAGACAGCCAACTTGGTGCTATAGAAGGGCCCCTATCCTTTTC +
Preference number: 1 (lower is better)
Translates to: RSNPLDFKTANLDQH*RQPTWCYRRAPILF
Trigger: GAAAAGGATAGGGGCCCTTCTATAGCACCAAGTTGGCTGTCTTCAGTGTTGGTCAAGATTAGCTGTCTTAAAGTCCAAAGGATTGGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR CCA 90 bp TGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCATCGGTGTTaGAGGAAGGATTACGTTGTTTTCCTAATGGATATGGCAGAAATT +
Preference number: 1 (lower is better)
Translates to: WGQMFPGHGGLYHRC*RKDYVVFLMDMAEI
Trigger: AATTTCTGCCATATCCATTAGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CCA 90 bp TGCATCTTCAACAATTCCACAAGGTCAAACAGAGCCTACCCATTTTaGGATCTCAGATGGAAATGCAGAAATCACCCATCTTCTGCGTCG +
Preference number: 1 (lower is better)
Translates to: CIFNNSTRSNRAYPF*DLRWKCRNHPSSAS
Trigger: CGACGCAGAAGATGGGTGATTTCTGCATTTCCATCTGAGATCCCAAAATGGGTAGGCTCTGTTTGACCTTGTGGAATTGTTGAAGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
3UTR CCA 90 bp ATAATAGCTCTCCAATCCTGTGCATCCCAGCTCTTTACATTTAGGTaGGGCCATGAACACATACAGGTTGATGATCTGTTAACAGCAGAG +
Preference number: 1 (lower is better)
Translates to: IIALQSCASQLFTFR*GHEHIQVDDLLTAE
Trigger: CTCTGCTGTTAACAGATCATCAACCTGTATGTGTTCATGGCCCCACCTAAATGTAAAGAGCTGGGATGCACAGGATTGGAGAGCTATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488005.5
3UTR GCA 90 bp ATATGTGTATGTAGACAGCAACAAGACTTCTGCAGATCACTTCTGTaGCAGTATCCCATTGTCATCTGGTCCCAGTGTTTACTTGTCAAG +
Preference number: 1 (lower is better)
Translates to: ICVCRQQQDFCRSLL*QYPIVIWSQCLLVK
Trigger: CTTGACAAGTAAACACTGGGACCAGATGACAATGGGATACTGGCACAGAAGTGATCTGCAGAAGTCTTGTTGCTGTCTACATACACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR TCA 90 bp AAGGATCAACAGAACAAACTATGGGAAATTCCGCTGCACAAGACTTaGAACAATCCCTCTCCTTCAGCTAGATGTCAGAAAAGTCCTCTT +
Preference number: 1 (lower is better)
Translates to: KDQQNKLWEIPLHKT*NNPSPSARCQKSPL
Trigger: AAGAGGACTTTTCTGACATCTAGCTGAAGGAGAGGGATTGTTTCAAGTCTTGTGCAGCGGAATTTCCCATAGTTTGTTCTGTTGATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR TCA 90 bp CATAGGTCTGTGACTTTAAATCCATTGTTCTTCCCACTCTCCATCTaGTCCATCATCCTAACACCGTCCATCAGTATATCCCATGTGTTT +
Preference number: 1 (lower is better)
Translates to: HRSVTLNPLFFPLSI*SIILTPSISISHVF
Trigger: AAACACATGGGATATACTGATGGACGGTGTTAGGATGATGGATCAGATGGAGAGTGGGAAGAACAATGGATTTAAAGTCACAGACCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR CCA 90 bp ACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATaGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTT +
Preference number: 1 (lower is better)
Translates to: TELNSLNLGANVSRS*RLIPSVLEEGLRCF
Trigger: AAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CCA 90 bp TTCTTCCCACTTTTCCTCCTTGTACAGCAAACACAGCACAAATGTTaGAGTCAACATCTAGTGATGCTGTTGAGAACTGCATCTTCAACA +
Preference number: 1 (lower is better)
Translates to: FFPLFLLVQQTQHKC*SQHLVMLLRTASST
Trigger: TGTTGAAGATGCAGTTCTCAACAGCATCACTAGATGTTGACTCCAACATTTGTGCTGTGTTTGCTGTACAAGGAGGAAAAGTGGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000618105.4
3UTR TCA 90 bp TTAAGTGTTATAGACTATGCTGGGCCAGCTCTGAGTGCCACATCCTaGGTGATAAAGGCATCTGTGTGCTCTTTAATACATTTATTTGTG +
Preference number: 1 (lower is better)
Translates to: LSVIDYAGPALSATS*VIKASVCSLIHLFV
Trigger: CACAAATAAATGTATTAAAGAGCACACAGATGCCTTTATCACTCAGGATGTGGCACTCAGAGCTGGCCCAGCATAGTCTATAACACTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR TCA 90 bp TCCATGAGAAAGGTCTTATTTACTCCCACTTTTAAAAGGGAAAGCTaGAAAGTGAAGAGGTTTAGTAGCTGGCTTTATGCCACATGGGTA +
Preference number: 1 (lower is better)
Translates to: SMRKVLFTPTFKRES*KVKRFSSWLYATWV
Trigger: TACCCATGTGGCATAAAGCCAGCTACTAAACCTCTTCACTTTTCAGCTTTCCCTTTTAAAAGTGGGAGTAAATAAGACCTTTCTCATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CCA 90 bp CCCAAGCCATCAATAAGCTGCTACTTCCAACAATATATGAAGTCATaGAACACATATGTGTATGTAGACAGCAACAAGACTTCTGCAGAT +
Preference number: 1 (lower is better)
Translates to: PKPSISCYFQQYMKS*NTYVYVDSNKTSAD
Trigger: ATCTGCAGAAGTCTTGTTGCTGTCTACATACACATATGTGTTCCATGACTTCATATATTGTTGGAAGTAGCAGCTTATTGATGGCTTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR TCA 90 bp TCCAAGCATGACAGTTTAATCTCCATATCCAATCCTCCCCTGACCTaGTTAATTTTGCACTTAAGCAACTTCCATGATAAGTTATACTTT +
Preference number: 1 (lower is better)
Translates to: SKHDSLISISNPPLT*LILHLSNFHDKLYF
Trigger: AAAGTATAACTTATCATGGAAGTTGCTTAAGTGCAAAATTAATCAGGTCAGGGGAGGATTGGATATGGAGATTAAACTGTCATGCTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617133.4
3UTR CCA 90 bp CTAAGAAGAAGGATGAATAGGCCATTGCAATGGATTAGCCTGTTCTaGATTAGTTCAAATTTACAGCAGAAAGTTGGGATTTTTAGAGAT +
Preference number: 1 (lower is better)
Translates to: LRRRMNRPLQWISLF*ISSNLQQKVGIFRD
Trigger: ATCTCTAAAAATCCCAACTTTCTGCTGTAAATTTGAACTAATCCAGAACAGGCTAATCCATTGCAATGGCCTATTCATCCTTCTTCTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CCA 90 bp GATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCGGATCCAGGGTCCTCTaGCCCGCTGAGCTGGGCTTC +
Preference number: 2 (lower is better)
Translates to: DPGSSGPLSWASYAGSPPGSRVL*PAELGF
Trigger: GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCC...GGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR CCA 90 bp GGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTGGATCCAGGGTCCTCTaGCCCGCTGAGCTGGGCTTC +
Preference number: 2 (lower is better)
Translates to: GRMLTLMDPGSSGPLSWAGSRVL*PAELGF
Trigger: GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCC...AGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR TCA 90 bp TCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCGGTCCTCTGGCCCGCTaGGCTGGGCTTCTTATGCTG +
Preference number: 2 (lower is better)
Translates to: SGPLSWASYAGSPPPFYAGPLAR*AGLLML
Trigger: CAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACC...GGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR TCA 90 bp CCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTGGTCCTCTGGCCCGCTaGGCTGGGCTTCTTATGCTG +
Preference number: 2 (lower is better)
Translates to: PAELGFLCWVSSPFLCHAGPLAR*AGLLML
Trigger: CAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACC...AGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR GCA 90 bp CATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCGAGCTGGGCTTCTTATaGTGGGTCTCCTCCCCCTTT +
Preference number: 2 (lower is better)
Translates to: HGSRVLWPAELGFLCWVSELGFL*WVSSPF
Trigger: AAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTC...GGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR GCA 90 bp CCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCGAGCTGGGCTTCTTATaGTGGGTCTCCTCCCCCTTT +
Preference number: 2 (lower is better)
Translates to: PDAYSHGSRVLWPAELGFELGFL*WVSSPF
Trigger: AAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTC...GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR CCA 90 bp TCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCACTCTGTTGTCGCTCTaGAGTTGGGCATCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: SRVLWPAELGFLCWVSSPTLLSL*SWASPS
Trigger: ACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGT...GGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466986.5
3UTR-3UTR CCA 90 bp TCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCTCTGGCCCGCTGAGCTaGGCTTCTTATGCTGGGTCT +
Preference number: 2 (lower is better)
Translates to: SGPLSWASYAGSPPPFYASGPLS*ASYAGS
Trigger: AGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA...GGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR GCA 90 bp TCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCGAGCTGGGCTTCTTATaGTGGGTCTCCTCCCCCTTT +
Preference number: 2 (lower is better)
Translates to: SGPLSWASYAGSPPPFYAELGFL*WVSSPF
Trigger: AAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTC...GGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR CCA 90 bp CCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTCTGGCCCGCTGAGCTaGGCTTCTTATGCTGGGTCT +
Preference number: 2 (lower is better)
Translates to: PAELGFLCWVSSPFLCHASGPLS*ASYAGS
Trigger: AGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA...AGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR CCA 90 bp GGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGGGATGCTTACTCTCATaGATCCAGGGTCCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: GPLSWASYAGSPPPFYAMGCLLS*IQGPLA
Trigger: GGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCC...CATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR TCA 90 bp GGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCACTGGTCCTCTGGCCCGCTaGGCTGGGCTTCTTATGCTG +
Preference number: 2 (lower is better)
Translates to: GLLMLGLLPLFMPCFLPTGPLAR*AGLLML
Trigger: CAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACC...AGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR TCA 90 bp TCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCCCCAGGAGTTTCTCTTaGAGGAGACCAGCTGATGCA +
Preference number: 2 (lower is better)
Translates to: SGPLSWASYAGSPPPFYAPRSFS*RRPADA
Trigger: TGCATCAGCTGGTCTCCTTCAAGAGAAACTCCTGGG...GGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000613919.4
3UTR-3UTR GCA 90 bp CTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGAGCTGGGCTTCTTATaGTGGGTCTCCTCCCCCTTT +
Preference number: 2 (lower is better)
Translates to: LTLMDPGSSGPLSWASYAELGFL*WVSSPF
Trigger: AAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTC...AGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR TCA 90 bp GATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCAATCCTCCCCTGACCTaGTTAATTTTGCACTTAAGC +
Preference number: 2 (lower is better)
Translates to: DPGSSGPLSWASYAGSPPNPPLT*LILHLS
Trigger: GCTTAAGTGCAAAATTAATCAGGTCAGGGGAGGATT...GGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617133.4
3UTR-3UTR TCA 90 bp GTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATTGAAGGAGACCAGCTaGTGCATGTCCATGGATGTC +
Preference number: 2 (lower is better)
Translates to: VLWPAELGFLCWVSSPFLLKETS*CMSMDV
Trigger: GACATCCATGGACATGCATCAGCTGGTCTCCTTCAA...TAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613919.4
3UTR-3UTR GCA 90 bp GGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTCCTCCCCCTTTTTATaGCATGCTTTCTTCCCACTT +
Preference number: 2 (lower is better)
Translates to: GSSGPLSWASYAGSPPPFSSPFL*HAFFPL
Trigger: AAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGA...AAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR CAA 90 bp CCAGGCAGTAGATGGGCACCTCGCCCAATGTGTCCTTCATCTGACTaGATGGTACCAAGCCACTGCAGGAGACACAGCCATTTAGGGAGA +
Preference number: 2 (lower is better)
Translates to: PGSRWAPRPMCPSSD*MVPSHCRRHSHLGR
Trigger: TCTCCCTAAATGGCTGTGTCTCCTGCAGTGGCTTGGTACCATCAAGTCAGATGAAGGACACATTGGGCGAGGTGCCCATCTACTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR-3UTR TCA 90 bp AAGTGCTCCTCAGGTAGACAAGTTGGGTGTTGGGGGCAGGATGGGAAGGAAGTAGCAAAGAGTGTTCCATaGCTGGAGCACAGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: KCSSGRQVGCWGQDGKEVAKSVP*LEHREW
Trigger: CCACTCCCTGTGCTCCAGTCATGGAACACTCTTTGC...TACTTCCTTCCCATCCTGCCCCCAACACCCAACTTGTCTACCTGAGGAGCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623693.3
3UTR-3UTR GCA 90 bp ATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTTCCTCCCCCTTTTTATaGCATGCTTTCTTCCCACTT +
Preference number: 2 (lower is better)
Translates to: MDPGSSGPLSWASYAGSPSSPFL*HAFFPL
Trigger: AAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGA...AGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR CCA 90 bp ACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGAGAGCCTACCCATTTTaGGATCTCAGATGGAAATGC +
Preference number: 2 (lower is better)
Translates to: TLMDPGSSGPLSWASYAGRAYPF*DLRWKC
Trigger: GCATTTCCATCTGAGATCCCAAAATGGGTAGGCTCT...CCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
3UTR-3UTR CCA 90 bp GGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCATGGATGTCTCTTCTaGCTGTCTCAGTGCGTTCTT +
Preference number: 2 (lower is better)
Translates to: GPLSWASYAGSPPPFYAMHGCLF*LSQCVL
Trigger: AAGAACGCACTGAGACAGCCAGAAGAGACATCCATG...CATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613919.4
3UTR-3UTR GCA 90 bp CCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTCTTCCTTCAGAGCTaGATAGCATCATCTGATGTA +
Preference number: 2 (lower is better)
Translates to: PDAYSHGSRVLWPAELGFFFLQS*IASSDV
Trigger: TACATCAGATGATGCTATGCAGCTCTGAAGGAAGAA...GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
3UTR-3UTR CCA 90 bp ATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTACACAGCACAAATGTTaGAGTCCTGGCAATACATGT +
Preference number: 2 (lower is better)
Translates to: MDPGSSGPLSWASYAGSPTQHKC*SPGNTC
Trigger: ACATGTATTGCCAGGACTCCAACATTTGTGCTGTGT...AGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
3UTR-3UTR CCA 90 bp TCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCACACAGCACAAATGTTaGAGTCCTGGCAATACATGT +
Preference number: 2 (lower is better)
Translates to: SHGSRVLWPAELGFLCWVTQHKC*SPGNTC
Trigger: ACATGTATTGCCAGGACTCCAACATTTGTGCTGTGT...GACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
3UTR-3UTR CCA 90 bp TGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATAGAGCCTACCCATTTTaGGATCTTCCAGATCCAAGC +
Preference number: 2 (lower is better)
Translates to: WPAELGFLCWVSSPFLCHRAYPF*DLPDPS
Trigger: GCTTGGATCTGGAAGATCCCAAAATGGGTAGGCTCT...ATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000617133.4
3UTR CAA 90 bp CTGTTGTCGCTCTGGAGTTGGGCATCTCCAAGTTTATCTGTTGCTTaGCAAAGGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: LLSLWSWASPSLSVA*QRPDAYSHGSRVLW
Trigger: CCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCTTTGCAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAGAGCGACAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
3UTR-3UTR GCA 90 bp ACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGGATGCTGTTGAGAACTaGATCTTCAACAATTCCACA +
Preference number: 2 (lower is better)
Translates to: TLMDPGSSGPLSWASYAGDAVEN*IFNNST
Trigger: TGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATC...CCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR GCA 90 bp ATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTGATGCTGTTGAGAACTaGATCTTCAACAATTCCACA +
Preference number: 2 (lower is better)
Translates to: MDPGSSGPLSWASYAGSPDAVEN*IFNNST
Trigger: TGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATC...AGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR GCA 90 bp GATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATCCTCCCCCTTTTTATaGCATGCTTTCTTCCCACTT +
Preference number: 2 (lower is better)
Translates to: DAYSHGSRVLWPAELGFLSSPFL*HAFFPL
Trigger: AAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGA...TAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR CCA 90 bp CTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTACACAGCACAAATGTTaGAGTCAACATCTAGTGATG +
Preference number: 2 (lower is better)
Translates to: LMDPGSSGPLSWASYAGSTQHKC*SQHLVM
Trigger: CATCACTAGATGTTGACTCCAACATTTGTGCTGTGT...AGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000618105.4
3UTR-3UTR CCA 90 bp ACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGCAAATGTTGGAGTCCTaGCAATACATGTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: TLMDPGSSGPLSWASYAGQMLES*QYMFFL
Trigger: AAGGAAGAACATGTATTGCCAGGACTCCAACATTTG...CCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
3UTR-3UTR TCA 90 bp CAACAATACTGCAGTATGCTAACCATAATCCTACCTTGCCCAGGCTGGACCTTCGCTGCTCTCTTTGCCTaGAATGCTGTAGCACCACCC +
Preference number: 2 (lower is better)
Translates to: QQYCSMLTIILPCPGWTFAALFA*NAVAPP
Trigger: GGGTGGTGCTACAGCATTTCAGGCAAAGAGAGCAGC...GAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTTAGCATACTGCAGTATTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
3UTR-3UTR GCA 90 bp CAGTATGCTAACCATAATCCTACCTTGCCCAGGCTGGACCTTCACCCAGGCTGCAGCTCTCCAATCCTGTaGATCCCAGCTCTTTACATT +
Preference number: 2 (lower is better)
Translates to: QYANHNPTLPRLDLHPGCSSPIL*IPALYI
Trigger: AATGTAAAGAGCTGGGATGCACAGGATTGGAGAGCT...GCAGCCTGGGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTTAGCATACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
3UTR-3UTR GCA 90 bp TCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCGATGCTGTTGAGAACTaGATCTTCAACAATTCCACA +
Preference number: 2 (lower is better)
Translates to: SGPLSWASYAGSPPPFYADAVEN*IFNNST
Trigger: TGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATC...GGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR GCA 90 bp GGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGGATGCTGTTGAGAACTaGATCTTCAACAATTCCACA +
Preference number: 2 (lower is better)
Translates to: GPLSWASYAGSPPPFYAMDAVEN*IFNNST
Trigger: TGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATC...CATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR GCA 90 bp CTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGTTTATCTGTTGCTTTaGAAAGGCCGGATGCTTACT +
Preference number: 2 (lower is better)
Translates to: LTLMDPGSSGPLSWASYAVYLLL*KGRMLT
Trigger: AGTAAGCATCCGGCCTTTGCAAAGCAACAGATAAAC...AGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
3UTR-3UTR GCA 90 bp AGTGCTCCTCAGGTAGACAAGTTGGGTGTTGGGGGCAGGATGGGAAGGAAGTATAGAGAGACCGGAGCATaGTCAAAGAACTGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: SAPQVDKLGVGGRMGRKYRETGA*SKNCKE
Trigger: CTCTTTGCAGTTCTTTGAGCATGCTCCGGTCTCTCT...ATACTTCCTTCCCATCCTGCCCCCAACACCCAACTTGTCTACCTGAGGAGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623693.3
3UTR-3UTR CCA 90 bp GCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCCAAATGTTGGAGTCCTaGCAATACATGTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: AYSHGSRVLWPAELGFLCQMLES*QYMFFL
Trigger: AAGGAAGAACATGTATTGCCAGGACTCCAACATTTG...GCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
3UTR-3UTR CCA 90 bp GGTCAAACAGAGCCTACCCATTTTGGGATCTCAGATGGAAATGCAGAAATCACCCTGGGAGCTGTAGACTaGAGCTGTTCCTATTCGGCC +
Preference number: 2 (lower is better)
Translates to: GQTEPTHFGISDGNAEITLGAVD*SCSYSA
Trigger: GGCCGAATAGGAACAGCTCCAGTCTACAGCTCCCAG...GGTGATTTCTGCATTTCCATCTGAGATCCCAAAATGGGTAGGCTCTGTTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613919.4
3UTR-3UTR TCA 90 bp AGTGCTCCTCAGGTAGACAAGTTGGGTGTTGGGGGCAGGATGGGAAGGAAGTATAGCTTATATAAAGCATaGAAGAGAGACCGGAGCATG +
Preference number: 2 (lower is better)
Translates to: SAPQVDKLGVGGRMGRKYSLYKA*KRDRSM
Trigger: CATGCTCCGGTCTCTCTTTCATGCTTTATATAAGCT...ATACTTCCTTCCCATCCTGCCCCCAACACCCAACTTGTCTACCTGAGGAGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623693.3
3UTR-3UTR CCA 90 bp CCGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCCTGGAACCAGCCTGTTaGAGAAGTCACTGTCTGAAA +
Preference number: 2 (lower is better)
Translates to: PVMEAYTIGVGGRITLFSLEPAC*RSHCLK
Trigger: TTTCAGACAGTGACTTCTCCAACAGGCTGGTTCCAG...GGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR TCA 90 bp AGTACCTTCTCAGCTGTAACTTTACATGACCCATGCCGGATAGATGGATGGATGGCAGTTGAGGAGGAGTaGCTAATAGGAGAACTAGGG +
Preference number: 2 (lower is better)
Translates to: STFSAVTLHDPCRIDGWMAVEEE*LIGELG
Trigger: CCCTAGTTCTCCTATTAGTCACTCCTCCTCAACTGC...CATCCATCCATCTATCCGGCATGGGTCATGTAAAGTTACAGCTGAGAAGGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623498.3
3UTR-3UTR GCA 90 bp CAGTATGCTAACCATAATCCTACCTTGCCCAGGCTGGACCTTCACCCAGGCTGCACTACCCAACAATACTaGAGTATGCTAACCATAATC +
Preference number: 2 (lower is better)
Translates to: QYANHNPTLPRLDLHPGCTTQQY*SMLTII
Trigger: GATTATGGTTAGCATACTGCAGTATTGTTGGGTAGT...GCAGCCTGGGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTTAGCATACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
3UTR-3UTR GCA 90 bp TCAGATGGAAATGCAGAAATCACCCATCTTCTGCGTCGCTCACGCTGGGAGCTGGATCTCAGATGGAAATaGAGAAATCACCCATCTTCT +
Preference number: 2 (lower is better)
Translates to: SDGNAEITHLLRRSRWELDLRWK*RNHPSS
Trigger: AGAAGATGGGTGATTTCTGCATTTCCATCTGAGATC...CAGCTCCCAGCGTGAGCGACGCAGAAGATGGGTGATTTCTGCATTTCCATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613919.4
3UTR CAA 90 bp GCTACAGACTCTACTGGGCTCTATTTTCACTCTGGAACCAGCCTGTaGGAGAAGTCACTGTCTGAAACATTGTCAGTTGTGATGACAGAG +
Preference number: 2 (lower is better)
Translates to: ATDSTGLYFHSGTSL*EKSLSETLSVVMTE
Trigger: CTCTGTCATCACAACTGACAATGTTTCAGACAGTGACTTCTCCAACAGGCTGGTTCCAGAGTGAAAATAGAGCCCAGTAGAGTCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR TCA 90 bp AATAGGGTCACCCTTCAAGTAAGCCCCTGTTATGTAGCTACAGGAAGTATCATACCACTCCCTCCTTACTaGCTCCATGCACATATCCAC +
Preference number: 2 (lower is better)
Translates to: NRVTLQVSPCYVATGSIIPLPPY*LHAHIH
Trigger: GTGGATATGTGCATGGAGTCAGTAAGGAGGGAGTGG...TATGATACTTCCTGTAGCTACATAACAGGGGCTTACTTGAAGGGTGACCCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
3UTR-3UTR TCA 90 bp TATGTAGACAGCAACAAGACTTCTGCAGATCACTTCTGTGCCAGTATCCCATTGGTCCTTCATCTGACTTaGTGGTACCAAGCCACTGCA +
Preference number: 2 (lower is better)
Translates to: YVDSNKTSADHFCASIPLVLHLT*WYQATA
Trigger: TGCAGTGGCTTGGTACCATCAAGTCAGATGAAGGAC...CAATGGGATACTGGCACAGAAGTGATCTGCAGAAGTCTTGTTGCTGTCTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR-3UTR GCA 90 bp CAACAATACTGCAGTATGCTAACCATAATCCTACCTTGCCCAGGCTGGACCTTCAGCTCTCCAATCCTGTaGATCCCAGCTCTTTACATT +
Preference number: 2 (lower is better)
Translates to: QQYCSMLTIILPCPGWTFSSPIL*IPALYI
Trigger: AATGTAAAGAGCTGGGATGCACAGGATTGGAGAGCT...GAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTTAGCATACTGCAGTATTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
3UTR-3UTR GCA 90 bp AATAGGGTCACCCTTCAAGTAAGCCCCTGTTATGTAGCTACAGGAAGTATCATACCAGGCTGCTCTCTTTaGCTGAAATGCTGTAGCACC +
Preference number: 2 (lower is better)
Translates to: NRVTLQVSPCYVATGSIIPGCSL*LKCCST
Trigger: GGTGCTACAGCATTTCAGGCAAAGAGAGCAGCCTGG...TATGATACTTCCTGTAGCTACATAACAGGGGCTTACTTGAAGGGTGACCCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
3UTR-3UTR GCA 90 bp GTCACCCTTCAAGTAAGCCCCTGTTATGTAGCTACAGGAAGTATCATAATCTCTACCATAATCCTACCTTaGCCAGGCTGGACCTTCACC +
Preference number: 2 (lower is better)
Translates to: VTLQVSPCYVATGSIIISTIILP*PGWTFT
Trigger: GGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGT...AGAGATTATGATACTTCCTGTAGCTACATAACAGGGGCTTACTTGAAGGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
3UTR-3UTR GCA 90 bp CTGGAGTTGGGCATCTCCAAGTTTATCTGTTGCTTTGCAAAGGCCGGATGCTTATCCTCCCCCTTTTTATaGCATGCTTTCTTCCCACTT +
Preference number: 2 (lower is better)
Translates to: LELGISKFICCFAKAGCLSSPFL*HAFFPL
Trigger: AAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGA...TAAGCATCCGGCCTTTGCAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466986.5
3UTR-3UTR GCA 90 bp GGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCACTTTCTTCCTTCAGAGCTaGATAGCATCATCTGATGTA +
Preference number: 2 (lower is better)
Translates to: GLLMLGLLPLFMPCFLPTFFLQS*IASSDV
Trigger: TACATCAGATGATGCTATGCAGCTCTGAAGGAAGAA...AGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
3UTR-3UTR CCA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTGCTCTATTTTCACTCTaGAACCAGCCTGTTGGAGAA +
Preference number: 2 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPALFSL*NQPVGE
Trigger: TTCTCCAACAGGCTGGTTCCAGAGTGAAAATAGAGC...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CCA 90 bp CTGACCACTTGGTACAGGAATTCCTGTCAGATGGGTCAACAAGCCTTACAGAACAGCTACAGACTCTACTaGGCTCTATTTTCACTCTGG +
Preference number: 2 (lower is better)
Translates to: LTTWYRNSCQMGQQALQNSYRLY*ALFSLW
Trigger: CCAGAGTGAAAATAGAGCCCAGTAGAGTCTGTAGCT...GTTCTGTAAGGCTTGTTGACCCATCTGACAGGAATTCCTGTACCAAGTGGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CCA 90 bp AGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCACACAGCACAAATGTTaGAGTCAACATCTAGTGATG +
Preference number: 2 (lower is better)
Translates to: SWASYAGSPPPFYAMLSSTQHKC*SQHLVM
Trigger: CATCACTAGATGTTGACTCCAACATTTGTGCTGTGT...GGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000618105.4
3UTR-3UTR CCA 90 bp TGGCAATACATGTTCTTCCTTCAGAGCTGCATAGCATCATCTGATGTATTTGTTTCTGGCCCGCTGAGCTaGGCTTCTTATGCTGGGTCT +
Preference number: 2 (lower is better)
Translates to: WQYMFFLQSCIASSDVFVSGPLS*ASYAGS
Trigger: AGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA...AACAAATACATCAGATGATGCTATGCAGCTCTGAAGGAAGAACATGTATTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
3UTR CAA 90 bp ACCCAGCCACACAGAAAGCTAGGAAGTATAGTTCTACCATGTGCCTaGAAGACAGAGAGCCAGGGATATCTGGTATCAGCATGTTTACTT +
Preference number: 2 (lower is better)
Translates to: TQPHRKLGSIVLPCA*KTESQGYLVSACLL
Trigger: AAGTAAACATGCTGATACCAGATATCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAACTATACTTCCTAGCTTTCTGTGTGGCTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CAA 90 bp TTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCATCGGTGTaGGAGGAAGGATTACGTTGTTTTCCTAATGGATATGGCAGAAAT +
Preference number: 2 (lower is better)
Translates to: LGANVSRSWRLIPSV*EEGLRCFPNGYGRN
Trigger: ATTTCTGCCATATCCATTAGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CAA 90 bp AAATATCTAGCCGGTCCAATCCTTTGGACTTTAAGACAGCTAATCTaGACCAACACTGAAGACAGCCAACTTGGTGCTATAGAAGGGCCC +
Preference number: 2 (lower is better)
Translates to: KYLAGPILWTLRQLI*TNTEDSQLGAIEGP
Trigger: GGGCCCTTCTATAGCACCAAGTTGGCTGTCTTCAGTGTTGGTCAAGATTAGCTGTCTTAAAGTCCAAAGGATTGGACCGGCTAGATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR CAA 90 bp GATGATCTGTTAACAGCAGAGGAAAGCACTGCACATTCTTCCCTTTaGGTGGAGAACATAGCAGCCATACGGGGTTTCACAGACCAATAT +
Preference number: 2 (lower is better)
Translates to: DDLLTAEESTAHSSL*VENIAAIRGFTDQY
Trigger: ATATTGGTCTGTGAAACCCCGTATGGCTGCTATGTTCTCCACCAAAAGGGAAGAATGTGCAGTGCTTTCCTCTGCTGTTAACAGATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488005.5
3UTR CAA 90 bp CTGCATCTTCAACAATTCCACAAGGTCAAACAGAGCCTACCCATTTaGGGATCTCAGATGGAAATGCAGAAATCACCCATCTTCTGCGTC +
Preference number: 2 (lower is better)
Translates to: LHLQQFHKVKQSLPI*GSQMEMQKSPIFCV
Trigger: GACGCAGAAGATGGGTGATTTCTGCATTTCCATCTGAGATCCCAAAATGGGTAGGCTCTGTTTGACCTTGTGGAATTGTTGAAGATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
3UTR-3UTR GCA 90 bp GTCACCCTTCAAGTAAGCCCCTGTTATGTAGCTACAGGAAGTATCATAATCTCTTCTCTTTGCCTGAAATaGTGTAGCACCACCCCACTC +
Preference number: 2 (lower is better)
Translates to: VTLQVSPCYVATGSIIISSLCLK*CSTTPL
Trigger: GAGTGGGGTGGTGCTACAGCATTTCAGGCAAAGAGA...AGAGATTATGATACTTCCTGTAGCTACATAACAGGGGCTTACTTGAAGGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
3UTR-3UTR GCA 90 bp CCAGTATCCCATTGTCATCTGGTCCCAGTGTTTACTTGTCAAGAAGAGTCTGATATGGTACCAAGCCACTaGAGGAGACACAGCCATTTA +
Preference number: 2 (lower is better)
Translates to: PVSHCHLVPVFTCQEESDMVPSH*RRHSHL
Trigger: TAAATGGCTGTGTCTCCTGCAGTGGCTTGGTACCAT...ATCAGACTCTTCTTGACAAGTAAACACTGGGACCAGATGACAATGGGATACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR-3UTR GCA 90 bp TTCAATCTTGAAGCCACATGGAGCCCCGATGAGTTTAAGAGAGGGAGTACCTTCGCATGCTCAAAGAACTaGAAAGAGTGTTCCATGACT +
Preference number: 2 (lower is better)
Translates to: FNLEATWSPDEFKRGSTFACSKN*KECSMT
Trigger: AGTCATGGAACACTCTTTGCAGTTCTTTGAGCATGC...GAAGGTACTCCCTCTCTTAAACTCATCGGGGCTCCATGTGGCTTCAAGATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623693.3
3UTR-3UTR GCA 90 bp AGAGGGAGTACCTTCTCAGCTGTAACTTTACATGACCCATGCCGGATAGATGGACTCAGTCTTGCAGAATaGCATCTTTTATGGGTAGAG +
Preference number: 2 (lower is better)
Translates to: RGSTFSAVTLHDPCRIDGLSLAE*HLLWVE
Trigger: CTCTACCCATAAAAGATGGCATTCTGCAAGACTGAG...TCCATCTATCCGGCATGGGTCATGTAAAGTTACAGCTGAGAAGGTACTCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623498.3
3UTR-3UTR CCA 90 bp TGGCAATACATGTTCTTCCTTCAGAGCTGCATAGCATCATCTGATGTATTTGTTGGATGCTTACTCTCATaGATCCAGGGTCCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: WQYMFFLQSCIASSDVFVGCLLS*IQGPLA
Trigger: GGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCC...AACAAATACATCAGATGATGCTATGCAGCTCTGAAGGAAGAACATGTATTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
3UTR-3UTR TCA 90 bp TCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTTCTACCATGTGCCTTaGAGACAGAGAGCCAGGGAT +
Preference number: 2 (lower is better)
Translates to: STSLTELNSLNLGANVSRFYHVP*RQRARD
Trigger: ATCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAA...CCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR TCA 90 bp ACATGGAGCCCCGATGAGTTTAAGAGAGGGAGTACCTTCTCAGCTGTAACTTTAGAGTGGGCACACTCTTaGGAGCTTAAGTTTATATAC +
Preference number: 2 (lower is better)
Translates to: TWSPDEFKRGSTFSAVTLEWAHS*ELKFIY
Trigger: GTATATAAACTTAAGCTCTCAAGAGTGTGCCCACTC...TAAAGTTACAGCTGAGAAGGTACTCCCTCTCTTAAACTCATCGGGGCTCCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623498.3
3UTR-3UTR CCA 90 bp CTTCCACATTGTGTCCTTTCATCCCCACAAACACCCTGTGTAATAAATATTATTTCTCCAGGCAGTAGATaGGCACCTCGCCCAATGTGT +
Preference number: 2 (lower is better)
Translates to: LPHCVLSSPQTPCVINIISPGSR*APRPMC
Trigger: ACACATTGGGCGAGGTGCCCATCTACTGCCTGGAGA...AATAATATTTATTACACAGGGTGTTTGTGGGGATGAAAGGACACAATGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR-3UTR CCA 90 bp GCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCACTTTACACAGCACAAATGTTaGAGTCAACATCTAGTGATG +
Preference number: 2 (lower is better)
Translates to: ASYAGSPPPFYAMLSSHFTQHKC*SQHLVM
Trigger: CATCACTAGATGTTGACTCCAACATTTGTGCTGTGT...AAAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000618105.4
3UTR-3UTR CCA 90 bp GTTGGGGGCAGGATGGGAAGGAAGTATGTTCCAATAAAAGAGGACAGCTTATATAATCTTGAAGCCACATaGAGCCCCGATGAGTTTAAG +
Preference number: 2 (lower is better)
Translates to: VGGRMGRKYVPIKEDSLYNLEAT*SPDEFK
Trigger: CTTAAACTCATCGGGGCTCCATGTGGCTTCAAGATT...ATATAAGCTGTCCTCTTTTATTGGAACATACTTCCTTCCCATCCTGCCCCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623693.3
3UTR CAA 90 bp CTTGATAAAGTTACCAGTGGAAAGAGATCTTCACTGACTGACCACTaGGTACAGGAATTCCTGTCAGATGGGTCAACAAGCCTTACAGAA +
Preference number: 2 (lower is better)
Translates to: LDKVTSGKRSSLTDH*VQEFLSDGSTSLTE
Trigger: TTCTGTAAGGCTTGTTGACCCATCTGACAGGAATTCCTGTACCAAGTGGTCAGTCAGTGAAGATCTCTTTCCACTGGTAACTTTATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CAA 90 bp CAGCAAACACAGCACAAATGTTGGAGTCAACATCTAGTGATGCTGTaGAGAACTGCATCTTCAACAATTCCACAAGGTCAAACAGAGCCT +
Preference number: 2 (lower is better)
Translates to: QQTQHKCWSQHLVML*RTASSTIPQGQTEP
Trigger: AGGCTCTGTTTGACCTTGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATCACTAGATGTTGACTCCAACATTTGTGCTGTGTTTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
3UTR-3UTR TCA 90 bp TATGAAGTCATGGAACACATATGTGTATGTAGACAGCAACAAGACTTCTGCAGATTCCCACTCTCCATCTaGTCCATCATCCTAACACCG +
Preference number: 2 (lower is better)
Translates to: YEVMEHICVCRQQQDFCRFPLSI*SIILTP
Trigger: CGGTGTTAGGATGATGGATCAGATGGAGAGTGGGAA...TCTGCAGAAGTCTTGTTGCTGTCTACATACACATATGTGTTCCATGACTTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR-3UTR GCA 90 bp CTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCACTTTTGATGCTGTTGAGAACTaGATCTTCAACAATTCCACA +
Preference number: 2 (lower is better)
Translates to: LLMLGLLPLFMPCFLPTFDAVEN*IFNNST
Trigger: TGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATC...AAAAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR CCA 90 bp ATAAAGATCCAGAAATATAGCCGAGGCACAGTGTTAGAGGCAGTAGAGGATATTCTGGAACCAGCCTGTTaGAGAAGTCACTGTCTGAAA +
Preference number: 2 (lower is better)
Translates to: IKIQKYSRGTVLEAVEDILEPAC*RSHCLK
Trigger: TTTCAGACAGTGACTTCTCCAACAGGCTGGTTCCAG...AATATCCTCTACTGCCTCTAACACTGTGCCTCGGCTATATTTCTGGATCTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CCA 90 bp ACATTTAGGTGGGGCCATGAACACATACAGGTTGATGATCTGTTAACAGCAGAGCTCTTTACATTTAGGTaGGGCCATGAACACATACAG +
Preference number: 2 (lower is better)
Translates to: TFRWGHEHIQVDDLLTAELFTFR*GHEHIQ
Trigger: CTGTATGTGTTCATGGCCCCACCTAAATGTAAAGAG...CTCTGCTGTTAACAGATCATCAACCTGTATGTGTTCATGGCCCCACCTAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488005.5
3UTR CAA 90 bp TTTCACTCTGGAACCAGCCTGTTGGAGAAGTCACTGTCTGAAACATaGTCAGTTGTGATGACAGAGGGAAAGAGCACTAGAATATGTATT +
Preference number: 2 (lower is better)
Translates to: FHSGTSLLEKSLSET*SVVMTEGKSTRICI
Trigger: AATACATATTCTAGTGCTCTTTCCCTCTGTCATCACAACTGACAATGTTTCAGACAGTGACTTCTCCAACAGGCTGGTTCCAGAGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR TCA 90 bp TCACCCATCCAAATGTATACATCACATTCTCCGGGAGAAACTACTGCTAACATTGAGATCTTCACTGACTaGCCACTTGGTACAGGAATT +
Preference number: 2 (lower is better)
Translates to: SPIQMYTSHSPGETTANIEIFTD*PLGTGI
Trigger: AATTCCTGTACCAAGTGGTCAGTCAGTGAAGATCTC...AATGTTAGCAGTAGTTTCTCCCGGAGAATGTGATGTATACATTTGGATGGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR GCA 90 bp TCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGGTCTCTCTAGAGGCTTaGTTACAAACAACTAGGCTG +
Preference number: 2 (lower is better)
Translates to: STSLTELNSLNLGANVSRVSLEA*LQTTRL
Trigger: CAGCCTAGTTGTTTGTAAGCAAGCCTCTAGAGAGAC...CCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR GCA 90 bp CTGCATCTTCAACAATTCCACAAGGTCAAACAGAGCCTACCCATTTTGGGATCTGATCTCAGATGGAAATaGAGAAATCACCCATCTTCT +
Preference number: 2 (lower is better)
Translates to: LHLQQFHKVKQSLPILGSDLRWK*RNHPSS
Trigger: AGAAGATGGGTGATTTCTGCATTTCCATCTGAGATC...AGATCCCAAAATGGGTAGGCTCTGTTTGACCTTGTGGAATTGTTGAAGATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
3UTR-3UTR CCA 90 bp TCACCCATCCAAATGTATACATCACATTCTCCGGGAGAAACTACTGCTAACATTGCTCTATTTTCACTCTaGAACCAGCCTGTTGGAGAA +
Preference number: 2 (lower is better)
Translates to: SPIQMYTSHSPGETTANIALFSL*NQPVGE
Trigger: TTCTCCAACAGGCTGGTTCCAGAGTGAAAATAGAGC...AATGTTAGCAGTAGTTTCTCCCGGAGAATGTGATGTATACATTTGGATGGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CCA 90 bp CTGACCACTTGGTACAGGAATTCCTGTCAGATGGGTCAACAAGCCTTACAGAACTGGATTAGCCTGTTCTaGATTAGTTCAAATTTACAG +
Preference number: 2 (lower is better)
Translates to: LTTWYRNSCQMGQQALQNWISLF*ISSNLQ
Trigger: CTGTAAATTTGAACTAATCCAGAACAGGCTAATCCA...GTTCTGTAAGGCTTGTTGACCCATCTGACAGGAATTCCTGTACCAAGTGGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CCA 90 bp AATAGGGTCACCCTTCAAGTAAGCCCCTGTTATGTAGCTACAGGAAGTATCATACTCTTTACATTTAGGTaGGGCCATGAACACATACAG +
Preference number: 2 (lower is better)
Translates to: NRVTLQVSPCYVATGSIILFTFR*GHEHIQ
Trigger: CTGTATGTGTTCATGGCCCCACCTAAATGTAAAGAG...TATGATACTTCCTGTAGCTACATAACAGGGGCTTACTTGAAGGGTGACCCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
3UTR-3UTR CCA 90 bp CTGCATCTTCAACAATTCCACAAGGTCAAACAGAGCCTACCCATTTTGGGATCTTTTTGGGATCTCAGATaGAAATGCAGAAATCACCCA +
Preference number: 2 (lower is better)
Translates to: LHLQQFHKVKQSLPILGSFWDLR*KCRNHP
Trigger: TGGGTGATTTCTGCATTTCCATCTGAGATCCCAAAA...AGATCCCAAAATGGGTAGGCTCTGTTTGACCTTGTGGAATTGTTGAAGATGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
3UTR-3UTR TCA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTCATAATTCATCTGTCTaGACTTGTCATGTGACCCAC +
Preference number: 2 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTHNSSV*TCHVTH
Trigger: GTGGGTCACATGACAAGTTCAGACAGATGAATTATG...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR TCA 90 bp TACCCCAAGCCATCAATAAGCTGCTACTTCCAACAATATATGAAGTCATGGAACTTCCTATGGGCATCTTaGAAAACTAAGGATCAACAG +
Preference number: 2 (lower is better)
Translates to: YPKPSISCYFQQYMKSWNFLWAS*KTKDQQ
Trigger: CTGTTGATCCTTAGTTTTTCAAGATGCCCATAGGAA...GTTCCATGACTTCATATATTGTTGGAAGTAGCAGCTTATTGATGGCTTGGGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR-3UTR CCA 90 bp TGGGTCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCTCATCACAGCAGAAGTaGAAAGACTCTTCTGTTGTC +
Preference number: 2 (lower is better)
Translates to: WVNKPYRTKFFKLGGKCFSSQQK*KDSSVV
Trigger: GACAACAGAAGAGTCTTTCCACTTCTGCTGTGATGA...GAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGACCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CCA 90 bp GAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTAAGGTCATCACAGCAGAAGTaGAAAGACTCTTCTGTTGTC +
Preference number: 2 (lower is better)
Translates to: ETTLENGMALSISFVLVRSSQQK*KDSSVV
Trigger: GACAACAGAAGAGTCTTTCCACTTCTGCTGTGATGA...CCTTACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CCA 90 bp TGGGTCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCAAGAGGTTTAGTAGCTaGCTTTATGCCACATGGGTA +
Preference number: 2 (lower is better)
Translates to: WVNKPYRTKFFKLGGKCFKRFSS*LYATWV
Trigger: TACCCATGTGGCATAAAGCCAGCTACTAAACCTCTT...GAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGACCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CCA 90 bp CCTAGAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTAAGAGGTTTAGTAGCTaGCTTTATGCCACATGGGTA +
Preference number: 2 (lower is better)
Translates to: PRNYFGKWHGFVHFLCVSKRFSS*LYATWV
Trigger: TACCCATGTGGCATAAAGCCAGCTACTAAACCTCTT...ACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTCTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CCA 90 bp ATAAAGATCCAGAAATATAGCCGAGGCACAGTGTTAGAGGCAGTAGAGGATATTAATAGGCCATTGCAATaGATTAGCCTGTTCTGGATT +
Preference number: 2 (lower is better)
Translates to: IKIQKYSRGTVLEAVEDINRPLQ*ISLFWI
Trigger: AATCCAGAACAGGCTAATCCATTGCAATGGCCTATT...AATATCCTCTACTGCCTCTAACACTGTGCCTCGGCTATATTTCTGGATCTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CCA 90 bp TCACCCATCCAAATGTATACATCACATTCTCCGGGAGAAACTACTGCTAACATTTTATACCATCGGTGTTaGAGGAAGGATTACGTTGTT +
Preference number: 2 (lower is better)
Translates to: SPIQMYTSHSPGETTANILYHRC*RKDYVV
Trigger: AACAACGTAATCCTTCCTCCAACACCGATGGTATAA...AATGTTAGCAGTAGTTTCTCCCGGAGAATGTGATGTATACATTTGGATGGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CCA 90 bp TCACCCATCCAAATGTATACATCACATTCTCCGGGAGAAACTACTGCTAACATTAACTACTTTGGAAAATaGCATGGCTTTGTCCATTTC +
Preference number: 2 (lower is better)
Translates to: SPIQMYTSHSPGETTANINYFGK*HGFVHF
Trigger: GAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTT...AATGTTAGCAGTAGTTTCTCCCGGAGAATGTGATGTATACATTTGGATGGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CCA 90 bp TCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGAACTACTTTGGAAAATaGCATGGCTTTGTCCATTTC +
Preference number: 2 (lower is better)
Translates to: STSLTELNSLNLGANVSRNYFGK*HGFVHF
Trigger: GAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTT...CCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CAA 90 bp CAGAAAGTTGGGATTTTTAGAGATAATATGGTCCTAGAAACTACTTaGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTAAGG +
Preference number: 2 (lower is better)
Translates to: QKVGIFRDNMVLETT*ENGMALSISFVLVR
Trigger: CCTTACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTCTAGGACCATATTATCTCTAAAAATCCCAACTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR TCA 90 bp GAAAGGTCACCTTATAAATGTCAGCAAATGTTGCCTAAGCTATCAAAATACAGAGAATTGGGAATCAGGTaGAATCTACTCCAGATCATT +
Preference number: 2 (lower is better)
Translates to: ERSPYKCQQMLPKLSKYRELGIR*NLLQII
Trigger: AATGATCTGGAGTAGATTTCACCTGATTCCCAATTC...TCTGTATTTTGATAGCTTAGGCAACATTTGCTGACATTTATAAGGTGACCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248566.3
3UTR-3UTR GCA 90 bp CCTAGAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTACTATTTCCAGAGGCTaGTGCTATCTAATATTAAGA +
Preference number: 2 (lower is better)
Translates to: PRNYFGKWHGFVHFLCVSTISRG*CYLILR
Trigger: TCTTAATATTAGATAGCAGCAGCCTCTGGAAATAGT...ACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTCTAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR GCA 90 bp GAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTAAGGACTATTTCCAGAGGCTaGTGCTATCTAATATTAAGA +
Preference number: 2 (lower is better)
Translates to: ETTLENGMALSISFVLVRTISRG*CYLILR
Trigger: TCTTAATATTAGATAGCAGCAGCCTCTGGAAATAGT...CCTTACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CCA 72 bp AGGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTaGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCC +
Preference number: 3 (lower is better)
Translates to: RPDAYSHGSRVL*PAELGFLCWVS
Trigger: GGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR TCA 72 bp TGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTaGGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTT +
Preference number: 3 (lower is better)
Translates to: CLLSWIQGPLAR*AGLLMLGLLPL
Trigger: AAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR GCA 72 bp TTGCCCAGGCTGGACCTTCACCCAGGCTGCTCTCTTTaGCTGAAATGCTGTAGCACCACCCCACTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: LPRLDLHPGCSL*LKCCSTTPLPP
Trigger: AGGAGGGAGTGGGGTGGTGCTACAGCATTTCAGGCAAAGAGAGCAGCCTGGGTGAAGGTCCAGCCTGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
3UTR-3UTR CAA 90 bp CCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCCAGAGCCTACCCATTTaGGGATCTCAGATGGAAATG +
Preference number: 3 (lower is better)
Translates to: PDAYSHGSRVLWPAELGFQSLPI*GSQMEM
Trigger: CATTTCCATCTGAGATCCCAAAATGGGTAGGCTCTG...GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
3UTR CCA 72 bp AGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTaGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTC +
Preference number: 3 (lower is better)
Translates to: RVLWPAELGFLC*VSSPFLCHAFF
Trigger: GAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR CAA 90 bp GGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTCATCTAGTGATGCTGTaGAGAACTGCATCTTCAACA +
Preference number: 3 (lower is better)
Translates to: GRMLTLMDPGSSGPLSWAHLVML*RTASST
Trigger: TGTTGAAGATGCAGTTCTCAACAGCATCACTAGATG...AGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR CCA 72 bp GATTTCATCTCTGAAAGGGAACAGGTTCCAGCCTCCTaGGCATGTTCTCCAGGCAGTAGATGGGCACCTCGC +
Preference number: 3 (lower is better)
Translates to: DFISEREQVPAS*ACSPGSRWAPR
Trigger: GCGAGGTGCCCATCTACTGCCTGGAGAACATGCCCAGGAGGCTGGAACCTGTTCCCTTTCAGAGATGAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR TCA 72 bp GATGGGCACCTCGCCCAATGTGTCCTTCATCTGACTTaGTGGTACCAAGCCACTGCAGGAGACACAGCCATT +
Preference number: 3 (lower is better)
Translates to: DGHLAQCVLHLT*WYQATAGDTAI
Trigger: AATGGCTGTGTCTCCTGCAGTGGCTTGGTACCATCAAGTCAGATGAAGGACACATTGGGCGAGGTGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR TCA 72 bp CTCCTCCCCCAGGAGTTTCTCTTGAAGGAGACCAGCTaGTGCATGTCCATGGATGTCTCTTCTGGCTGTCTC +
Preference number: 3 (lower is better)
Translates to: LLPQEFLLKETS*CMSMDVSSGCL
Trigger: GAGACAGCCAGAAGAGACATCCATGGACATGCATCAGCTGGTCTCCTTCAAGAGAAACTCCTGGGGGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613919.4
3UTR TCA 72 bp TTCGGCCATCTTGGCTCCTCCCCCAGGAGTTTCTCTTaGAGGAGACCAGCTGATGCATGTCCATGGATGTCT +
Preference number: 3 (lower is better)
Translates to: FGHLGSSPRSFS*RRPADACPWMS
Trigger: AGACATCCATGGACATGCATCAGCTGGTCTCCTTCAAGAGAAACTCCTGGGGGAGGAGCCAAGATGGCCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613919.4
3UTR-3UTR CAA 90 bp CCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCAACACAGCACAAATGTaGGAGTCAACATCTAGTGAT +
Preference number: 3 (lower is better)
Translates to: PDAYSHGSRVLWPAELGFNTAQM*ESTSSD
Trigger: ATCACTAGATGTTGACTCCAACATTTGTGCTGTGTT...GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000618105.4
3UTR-3UTR CAA 90 bp GATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTACAGAGCCTACCCATTTaGGGATCTCAGATGGAAATG +
Preference number: 3 (lower is better)
Translates to: DAYSHGSRVLWPAELGFLQSLPI*GSQMEM
Trigger: CATTTCCATCTGAGATCCCAAAATGGGTAGGCTCTG...TAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
3UTR GCA 72 bp ATCTCCAAGTTTATCTGTTGCTTTGCAAAGGCCGGATaGTTACTCTCATGGATCCAGGGTCCTCTGGCCCGC +
Preference number: 3 (lower is better)
Translates to: ISKFICCFAKAG*LLSWIQGPLAR
Trigger: GCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCTTTGCAAAGCAACAGATAAACTTGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
3UTR CCA 72 bp TGCAATAACACTTCCTCTTCTACAGGGTCAGGCACCTaGTCACCAGGGTCCTTCCAGAGGTGTGACCTTAAG +
Preference number: 3 (lower is better)
Translates to: CNNTSSSTGSGT*SPGSFQRCDLK
Trigger: CTTAAGGTCACACCTCTGGAAGGACCCTGGTGACCAGGTGCCTGACCCTGTAGAAGAGGAAGTGTTATTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449279.5
3UTR-3UTR CAA 90 bp GGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCATCTAGTGATGCTGTaGAGAACTGCATCTTCAACA +
Preference number: 3 (lower is better)
Translates to: GPLSWASYAGSPPPFYAMHLVML*RTASST
Trigger: TGTTGAAGATGCAGTTCTCAACAGCATCACTAGATG...CATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR CAA 90 bp CCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTAACACAGCACAAATGTaGGAGTCCTGGCAATACATG +
Preference number: 3 (lower is better)
Translates to: PLSWASYAGSPPPFYAMLNTAQM*ESWQYM
Trigger: CATGTATTGCCAGGACTCCAACATTTGTGCTGTGTT...AAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
3UTR GCA 72 bp TCTGGAGTTGGGCATCTCCAAGTTTATCTGTTGCTTTaGAAAGGCCGGATGCTTACTCTCATGGATCCAGGG +
Preference number: 3 (lower is better)
Translates to: SGVGHLQVYLLL*KGRMLTLMDPG
Trigger: CCCTGGATCCATGAGAGTAAGCATCCGGCCTTTGCAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
3UTR-3UTR CAA 90 bp CTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCAAACACAGCACAAATGTaGGAGTCCTGGCAATACATG +
Preference number: 3 (lower is better)
Translates to: LGFLCWVSSPFLCHAFFPNTAQM*ESWQYM
Trigger: CATGTATTGCCAGGACTCCAACATTTGTGCTGTGTT...TGGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
3UTR GCA 72 bp GTTAAGTGTTATAGACTATGCTGGGCCAGCTCTGAGTaGCACATCCTGAGTGATAAAGGCATCTGTGTGCTC +
Preference number: 3 (lower is better)
Translates to: VKCYRLCWASSE*HILSDKGICVL
Trigger: GAGCACACAGATGCCTTTATCACTCAGGATGTGGCACTCAGAGCTGGCCCAGCATAGTCTATAACACTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CAA 90 bp CCGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTTAGGATGGGTAAGGTaGTGCTGCAGTAGCAACAAA +
Preference number: 3 (lower is better)
Translates to: PVMEAYTIGVGGRITLFSLGWVR*CCSSNK
Trigger: TTTGTTGCTACTGCAGCACAACCTTACCCATCCTAA...GGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CAA 90 bp CCGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCAGGATGAATAGGCCATaGCAATGGATTAGCCTGTTC +
Preference number: 3 (lower is better)
Translates to: PVMEAYTIGVGGRITLFSRMNRP*QWISLF
Trigger: GAACAGGCTAATCCATTGCAATGGCCTATTCATCCT...GGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CAA 90 bp GCCGGTCCAATCCTTTGGACTTTAAGACAGCTAATCTTGACCAACACTGAAGACTGTGCCAGTATCCCATaGTCATCTGGTCCCAGTGTT +
Preference number: 3 (lower is better)
Translates to: AGPILWTLRQLILTNTEDCASIP*SSGPSV
Trigger: AACACTGGGACCAGATGACAATGGGATACTGGCACA...GTCTTCAGTGTTGGTCAAGATTAGCTGTCTTAAAGTCCAAAGGATTGGACCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR-3UTR CAA 90 bp GGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCACTCATCTAGTGATGCTGTaGAGAACTGCATCTTCAACA +
Preference number: 3 (lower is better)
Translates to: GLLMLGLLPLFMPCFLPTHLVML*RTASST
Trigger: TGTTGAAGATGCAGTTCTCAACAGCATCACTAGATG...AGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
3UTR-3UTR CAA 90 bp GCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCAACACAGCACAAATGTaGGAGTCAACATCTAGTGAT +
Preference number: 3 (lower is better)
Translates to: AGLLMLGLLPLFMPCFLPNTAQM*ESTSSD
Trigger: ATCACTAGATGTTGACTCCAACATTTGTGCTGTGTT...GGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000618105.4
3UTR TCA 72 bp CCTTTGGACTTTAAGACAGCTAATCTTGACCAACACTaGAGACAGCCAACTTGGTGCTATAGAAGGGCCCCT +
Preference number: 3 (lower is better)
Translates to: PLDFKTANLDQH*RQPTWCYRRAP
Trigger: AGGGGCCCTTCTATAGCACCAAGTTGGCTGTCTTCAGTGTTGGTCAAGATTAGCTGTCTTAAAGTCCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR TCA 72 bp GAGCCTACCCATTTTGGGATCTTCCAGATCCAAGCATaGCAGTTTAATCTCCATATCCAATCCTCCCCTGAC +
Preference number: 3 (lower is better)
Translates to: EPTHFGIFQIQA*QFNLHIQSSPD
Trigger: GTCAGGGGAGGATTGGATATGGAGATTAAACTGTCATGCTTGGATCTGGAAGATCCCAAAATGGGTAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617133.4
3UTR GCA 72 bp TGTGGTCATGAGAGTGATGTTAAGTGTTATAGACTATaGTGGGCCAGCTCTGAGTGCCACATCCTGAGTGAT +
Preference number: 3 (lower is better)
Translates to: CGHESDVKCYRL*WASSECHILSD
Trigger: ATCACTCAGGATGTGGCACTCAGAGCTGGCCCAGCATAGTCTATAACACTTAACATCACTCTCATGACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CCA 72 bp CCTACATGTCCATATTGCATCAGCTACAGACTCTACTaGGCTCTATTTTCACTCTGGAACCAGCCTGTTGGA +
Preference number: 3 (lower is better)
Translates to: PTCPYCISYRLY*ALFSLWNQPVG
Trigger: TCCAACAGGCTGGTTCCAGAGTGAAAATAGAGCCCAGTAGAGTCTGTAGCTGATGCAATATGGACATGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CCA 72 bp ATGACTAAGTGCTCCTCAGGTAGACAAGTTGGGTGTTaGGGGCAGGATGGGAAGGAAGTATGTTCCAATAAA +
Preference number: 3 (lower is better)
Translates to: MTKCSSGRQVGC*GQDGKEVCSNK
Trigger: TTTATTGGAACATACTTCCTTCCCATCCTGCCCCCAACACCCAACTTGTCTACCTGAGGAGCACTTAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623693.3
3UTR-3UTR CAA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCATTCATCTGTCTGAACTaGTCATGTGACCCACCCAGC +
Preference number: 3 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPFICLN*SCDPPS
Trigger: GCTGGGTGGGTCACATGACAAGTTCAGACAGATGAA...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR TCA 72 bp ATAGACTATGCTGGGCCAGCTCTGAGTGCCACATCCTaGGTGATAAAGGCATCTGTGTGCTCTTTAATACAT +
Preference number: 3 (lower is better)
Translates to: IDYAGPALSATS*VIKASVCSLIH
Trigger: ATGTATTAAAGAGCACACAGATGCCTTTATCACTCAGGATGTGGCACTCAGAGCTGGCCCAGCATAGTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CCA 72 bp GGTCATGAGAGTGATGTTAAGTGTTATAGACTATGCTaGGCCAGCTCTGAGTGCCACATCCTGAGTGATAAA +
Preference number: 3 (lower is better)
Translates to: GHESDVKCYRLC*ASSECHILSDK
Trigger: TTTATCACTCAGGATGTGGCACTCAGAGCTGGCCCAGCATAGTCTATAACACTTAACATCACTCTCATGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CCA 72 bp CTCCAATCCTGTGCATCCCAGCTCTTTACATTTAGGTaGGGCCATGAACACATACAGGTTGATGATCTGTTA +
Preference number: 3 (lower is better)
Translates to: LQSCASQLFTFR*GHEHIQVDDLL
Trigger: TAACAGATCATCAACCTGTATGTGTTCATGGCCCCACCTAAATGTAAAGAGCTGGGATGCACAGGATTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488005.5
3UTR-3UTR CAA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTGTTCTACCATGTGCCTaGAAGACAGAGAGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTVLPCA*KTESQG
Trigger: TCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAAC...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CAA 90 bp CCTAGAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTGTTCTACCATGTGCCTaGAAGACAGAGAGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: PRNYFGKWHGFVHFLCVSVLPCA*KTESQG
Trigger: TCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAAC...ACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CAA 90 bp ATAAAGATCCAGAAATATAGCCGAGGCACAGTGTTAGAGGCAGTAGAGGATATTTTCATCTGTCTGAACTaGTCATGTGACCCACCCAGC +
Preference number: 3 (lower is better)
Translates to: IKIQKYSRGTVLEAVEDIFICLN*SCDPPS
Trigger: GCTGGGTGGGTCACATGACAAGTTCAGACAGATGAA...AATATCCTCTACTGCCTCTAACACTGTGCCTCGGCTATATTTCTGGATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CAA 90 bp ATAAAGATCCAGAAATATAGCCGAGGCACAGTGTTAGAGGCAGTAGAGGATATTTCTGGAACCAGCCTGTaGGAGAAGTCACTGTCTGAA +
Preference number: 3 (lower is better)
Translates to: IKIQKYSRGTVLEAVEDISGTSL*EKSLSE
Trigger: TTCAGACAGTGACTTCTCCAACAGGCTGGTTCCAGA...AATATCCTCTACTGCCTCTAACACTGTGCCTCGGCTATATTTCTGGATCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CCA 72 bp ATGTTTCCCGGTCATGGAGGCTTATACCATCGGTGTTaGAGGAAGGATTACGTTGTTTTCCTAATGGATATG +
Preference number: 3 (lower is better)
Translates to: MFPGHGGLYHRC*RKDYVVFLMDM
Trigger: CATATCCATTAGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGGGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CCA 72 bp AATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATaGAGGCTTATACCATCGGTGTTGGAGGAAGGATTA +
Preference number: 3 (lower is better)
Translates to: NSLNLGANVSRS*RLIPSVLEEGL
Trigger: TAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CCA 72 bp TGCAGATCACTTCTGTGCCAGTATCCCATTGTCATCTaGTCCCAGTGTTTACTTGTCAAGAAGAGTCTGATT +
Preference number: 3 (lower is better)
Translates to: CRSLLCQYPIVI*SQCLLVKKSLI
Trigger: AATCAGACTCTTCTTGACAAGTAAACACTGGGACCAGATGACAATGGGATACTGGCACAGAAGTGATCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR-3UTR CAA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCAAGGATGAATAGGCCATaGCAATGGATTAGCCTGTTC +
Preference number: 3 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPRMNRP*QWISLF
Trigger: GAACAGGCTAATCCATTGCAATGGCCTATTCATCCT...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CAA 90 bp TCAGAAAAGTCCTCTTTGTCTTGTGAGTTGATGAGAAGACAGGATTTCATCTCTTGTCCTTCATCTGACTaGATGGTACCAAGCCACTGC +
Preference number: 3 (lower is better)
Translates to: SEKSSLSCELMRRQDFISCPSSD*MVPSHC
Trigger: GCAGTGGCTTGGTACCATCAAGTCAGATGAAGGACA...AGAGATGAAATCCTGTCTTCTCATCAACTCACAAGACAAAGAGGACTTTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR-3UTR CAA 90 bp CTGCATCTTCAACAATTCCACAAGGTCAAACAGAGCCTACCCATTTTGGGATCTCATCTAGTGATGCTGTaGAGAACTGCATCTTCAACA +
Preference number: 3 (lower is better)
Translates to: LHLQQFHKVKQSLPILGSHLVML*RTASST
Trigger: TGTTGAAGATGCAGTTCTCAACAGCATCACTAGATG...AGATCCCAAAATGGGTAGGCTCTGTTTGACCTTGTGGAATTGTTGAAGATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
3UTR TCA 72 bp CAGAACAAACTATGGGAAATTCCGCTGCACAAGACTTaGAACAATCCCTCTCCTTCAGCTAGATGTCAGAAA +
Preference number: 3 (lower is better)
Translates to: QNKLWEIPLHKT*NNPSPSARCQK
Trigger: TTTCTGACATCTAGCTGAAGGAGAGGGATTGTTTCAAGTCTTGTGCAGCGGAATTTCCCATAGTTTGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR GCA 72 bp ACAGCTTATATAAAGCATGAAAGAGAGACCGGAGCATaGTCAAAGAACTGCAAAGAGTGTTCCATGACTGGA +
Preference number: 3 (lower is better)
Translates to: TAYIKHERETGA*SKNCKECSMTG
Trigger: TCCAGTCATGGAACACTCTTTGCAGTTCTTTGAGCATGCTCCGGTCTCTCTTTCATGCTTTATATAAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623693.3
3UTR-3UTR CAA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCATCACTGTCTGAAACATaGTCAGTTGTGATGACAGAG +
Preference number: 3 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPSLSET*SVVMTE
Trigger: CTCTGTCATCACAACTGACAATGTTTCAGACAGTGA...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CAA 90 bp TCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTTAGGATGGGTAAGGTaGTGCTGCAGTAGCAACAAA +
Preference number: 3 (lower is better)
Translates to: STSLTELNSLNLGANVSRLGWVR*CCSSNK
Trigger: TTTGTTGCTACTGCAGCACAACCTTACCCATCCTAA...CCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR TCA 72 bp CTTCTAATCATAATTCATCTGTCTGAACTTGTCATGTaGCCCACCCAGCCACACAGAAAGCTAGGAAGTATA +
Preference number: 3 (lower is better)
Translates to: LLIIIHLSELVM*PTQPHRKLGSI
Trigger: TATACTTCCTAGCTTTCTGTGTGGCTGGGTGGGTCACATGACAAGTTCAGACAGATGAATTATGATTAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR GCA 72 bp AAGAAATACAAGACAGTTTCTGTCTCTCTAGAGGCTTaGTTACAAACAACTAGGCTGGCTTTGTTCTCAGCA +
Preference number: 3 (lower is better)
Translates to: KKYKTVSVSLEA*LQTTRLALFSA
Trigger: TGCTGAGAACAAAGCCAGCCTAGTTGTTTGTAAGCAAGCCTCTAGAGAGACAGAAACTGTCTTGTATTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR-3UTR CAA 90 bp CAAACACAGCACAAATGTTGGAGTCAACATCTAGTGATGCTGTTGAGAACTGCAAACACAGCACAAATGTaGGAGTCAACATCTAGTGAT +
Preference number: 3 (lower is better)
Translates to: QTQHKCWSQHLVMLLRTANTAQM*ESTSSD
Trigger: ATCACTAGATGTTGACTCCAACATTTGTGCTGTGTT...TGCAGTTCTCAACAGCATCACTAGATGTTGACTCCAACATTTGTGCTGTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000618105.4
3UTR TCA 72 bp TATGTTCCAATAAAAGAGGACAGCTTATATAAAGCATaGAAGAGAGACCGGAGCATGCTCAAAGAACTGCAA +
Preference number: 3 (lower is better)
Translates to: YVPIKEDSLYKA*KRDRSMLKELQ
Trigger: TTGCAGTTCTTTGAGCATGCTCCGGTCTCTCTTTCATGCTTTATATAAGCTGTCCTCTTTTATTGGAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623693.3
3UTR GCA 72 bp TATCCTTTTCAACTATACCCCAAGCCATCAATAAGCTaGTACTTCCAACAATATATGAAGTCATGGAACACA +
Preference number: 3 (lower is better)
Translates to: YPFQLYPKPSIS*YFQQYMKSWNT
Trigger: TGTGTTCCATGACTTCATATATTGTTGGAAGTAGCAGCTTATTGATGGCTTGGGGTATAGTTGAAAAGGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444799.5
3UTR CCA 72 bp CAAACCAAATTAAATCTCCCATTCACAAAAGTGATGTaGCAACAGCTATCACTCTGTGAAAACTCAGTTGTA +
Preference number: 3 (lower is better)
Translates to: QTKLNLPFTKVM*QQLSLCENSVV
Trigger: TACAACTGAGTTTTCACAGAGTGATAGCTGTTGCCACATCACTTTTGTGAATGGGAGATTTAATTTGGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248566.3
3UTR CCA 72 bp TCTTTAATACATTTATTTGTGGGTGATTGTGGTATGTaGAGCCCTCTAAAATATCTCTTGCCCAGATCTATG +
Preference number: 3 (lower is better)
Translates to: SLIHLFVGDCGM*SPLKYLLPRSM
Trigger: CATAGATCTGGGCAAGAGATATTTTAGAGGGCTCCACATACCACAATCACCCACAAATAAATGTATTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCGGATCCAGGGTCCTCTaGCCCGCTGAGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SRVLWPAELGFLCWVSSPGSRVL*PAELGF
Trigger: GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCC...GGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR TCA 90 bp GGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTGGTCCTCTGGCCCGCTaGGCTGGGCTTCTTATGCTG +
Preference number: 4 (lower is better)
Translates to: GRMLTLMDPGSSGPLSWAGPLAR*AGLLML
Trigger: CAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACC...AGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR CCA 90 bp CGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTGGATCCAGGGTCCTCTaGCCCGCTGAGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RMLTLMDPGSSGPLSWASGSRVL*PAELGF
Trigger: GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCC...AGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR CCA 90 bp ACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGGGATCCAGGGTCCTCTaGCCCGCTGAGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TLMDPGSSGPLSWASYAGGSRVL*PAELGF
Trigger: GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCC...CCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR TCA 90 bp CGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTGGTCCTCTGGCCCGCTaGGCTGGGCTTCTTATGCTG +
Preference number: 4 (lower is better)
Translates to: RMLTLMDPGSSGPLSWASGPLAR*AGLLML
Trigger: CAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACC...AGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR TCA 90 bp TCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCGGTCCTCTGGCCCGCTaGGCTGGGCTTCTTATGCTG +
Preference number: 4 (lower is better)
Translates to: SHGSRVLWPAELGFLCWVGPLAR*AGLLML
Trigger: CAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACC...GACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR GCA 90 bp AGGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCAAATCACCCATCTTCTaGGTCGCTCACGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RPDAYSHGSRVLWPAELGKSPIF*VAHAGS
Trigger: GCTCCCAGCGTGAGCGACGCAGAAGATGGGTGATTT...GCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR TCA 90 bp CCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTGGTCCTCTGGCCCGCTaGGCTGGGCTTCTTATGCTG +
Preference number: 4 (lower is better)
Translates to: PLSWASYAGSPPPFYAMLGPLAR*AGLLML
Trigger: CAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACC...AAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR GCA 90 bp CTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTGAGCTGGGCTTCTTATaGTGGGTCTCCTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LMDPGSSGPLSWASYAGSELGFL*WVSSPF
Trigger: AAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTC...AGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR GCA 90 bp GATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCTTCTGGCTGTCTCAGTaGGTTCTTCACCCTCACACA +
Preference number: 4 (lower is better)
Translates to: DPGSSGPLSWASYAGSPPFWLSQ*VLHPHT
Trigger: TGTGTGAGGGTGAAGAACGCACTGAGACAGCCAGAA...GGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613919.4
CDS-3UTR CCA 90 bp ATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTGGATGCTTACTCTCATaGATCCAGGGTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: MDPGSSGPLSWASYAGSPGCLLS*IQGPLA
Trigger: GGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCC...AGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR CCA 90 bp AACACTTCCTCTTCTACAGGGTCAGGCACCTGGTCACCAGGGTCCTTCCAGAGGACAGGGTCAGGCACCTaGTCACCAGGGTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: NTSSSTGSGTWSPGSFQRTGSGT*SPGSFQ
Trigger: CTGGAAGGACCCTGGTGACCAGGTGCCTGACCCTGT...CCTCTGGAAGGACCCTGGTGACCAGGTGCCTGACCCTGTAGAAGAGGAAGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449279.5
CDS-3UTR CCA 90 bp TCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCCCTATTCGGCCATCTTaGCTCCTCCCCCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: SGPLSWASYAGSPPPFYAPIRPS*LLPQEF
Trigger: AAACTCCTGGGGGAGGAGCCAAGATGGCCGAATAGG...GGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR GCA 90 bp AGGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTCCTCCCCCTTTTTATaGCATGCTTTCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: RPDAYSHGSRVLWPAELGSSPFL*HAFFPL
Trigger: AAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGA...GCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR GCA 90 bp CCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTGAGCTGGGCTTCTTATaGTGGGTCTCCTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PAELGFLCWVSSPFLCHAELGFL*WVSSPF
Trigger: AAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTC...AGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR CCA 90 bp ATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATTCTGGCCCGCTGAGCTaGGCTTCTTATGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: MLTLMDPGSSGPLSWASYSGPLS*ASYAGS
Trigger: AGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA...ATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR CCA 90 bp CCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTGGCCCGCTGAGCTaGGCTTCTTATGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PLSWASYAGSPPPFYAMLSGPLS*ASYAGS
Trigger: AGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA...AAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR CCA 90 bp CTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGATGCTTACTCTCATaGATCCAGGGTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LTLMDPGSSGPLSWASYAGCLLS*IQGPLA
Trigger: GGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCC...AGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR CCA 90 bp CCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTCTGGGAGCTGTAGACTaGAGCTGTTCCTATTCGGCC +
Preference number: 4 (lower is better)
Translates to: PAELGFLCWVSSPFLCHALGAVD*SCSYSA
Trigger: GGCCGAATAGGAACAGCTCCAGTCTACAGCTCCCAG...AGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR CCA 90 bp GGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTAGAGCCTACCCATTTTaGGATCTCAGATGGAAATGC +
Preference number: 4 (lower is better)
Translates to: GRMLTLMDPGSSGPLSWARAYPF*DLRWKC
Trigger: GCATTTCCATCTGAGATCCCAAAATGGGTAGGCTCT...AGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR GCA 90 bp GATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCGTTTATCTGTTGCTTTaGAAAGGCCGGATGCTTACT +
Preference number: 4 (lower is better)
Translates to: DPGSSGPLSWASYAGSPPVYLLL*KGRMLT
Trigger: AGTAAGCATCCGGCCTTTGCAAAGCAACAGATAAAC...GGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
CDS-3UTR GCA 90 bp GTTCCAGCCTCCTGGGCATGTTCTCCAGGCAGTAGATGGGCACCTCGCCCAATGATGGTACCAAGCCACTaGAGGAGACACAGCCATTTA +
Preference number: 4 (lower is better)
Translates to: VPASWACSPGSRWAPRPMMVPSH*RRHSHL
Trigger: TAAATGGCTGTGTCTCCTGCAGTGGCTTGGTACCAT...CATTGGGCGAGGTGCCCATCTACTGCCTGGAGAACATGCCCAGGAGGCTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR CCA 90 bp TCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCGCTGATGCATGTCCATaGATGTCTCTTCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SGPLSWASYAGSPPPFYAADACP*MSLLAV
Trigger: GACAGCCAGAAGAGACATCCATGGACATGCATCAGC...GGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613919.4
CDS-3UTR TCA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTGGTCCTCTGGCCCGCTaGGCTGGGCTTCTTATGCTG +
Preference number: 4 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPGPLAR*AGLLML
Trigger: CAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACC...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp CTGCAGTATGCTAACCATAATCCTACCTTGCCCAGGCTGGACCTTCACCCAGGCCCACTCCCTCCTTACTaGCTCCATGCACATATCCAC +
Preference number: 4 (lower is better)
Translates to: LQYANHNPTLPRLDLHPGPLPPY*LHAHIH
Trigger: GTGGATATGTGCATGGAGTCAGTAAGGAGGGAGTGG...GCCTGGGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTTAGCATACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
CDS-3UTR GCA 90 bp TGCTTTGCAAAGGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTTTGCAAAGGCCGGATaGTTACTCTCATGGATCCAG +
Preference number: 4 (lower is better)
Translates to: CFAKAGCLLSWIQGPLARFAKAG*LLSWIQ
Trigger: CTGGATCCATGAGAGTAAGCATCCGGCCTTTGCAAA...GCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCTTTGCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
CDS-3UTR GCA 90 bp TGCAAAGGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTCCAAGTTTATCTGTTaGTTTGCAAAGGCCGGATGC +
Preference number: 4 (lower is better)
Translates to: CKGRMLTLMDPGSSGPLSSKFIC*FAKAGC
Trigger: GCATCCGGCCTTTGCAAAGCAACAGATAAACTTGGA...GCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
CDS-3UTR GCA 90 bp CAGTATGCTAACCATAATCCTACCTTGCCCAGGCTGGACCTTCACCCAGGCTGCCCAGGCTGCTCTCTTTaGCTGAAATGCTGTAGCACC +
Preference number: 4 (lower is better)
Translates to: QYANHNPTLPRLDLHPGCPGCSL*LKCCST
Trigger: GGTGCTACAGCATTTCAGGCAAAGAGAGCAGCCTGG...GCAGCCTGGGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTTAGCATACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
CDS-3UTR GCA 90 bp CAGTATGCTAACCATAATCCTACCTTGCCCAGGCTGGACCTTCACCCAGGCTGCACCATAATCCTACCTTaGCCAGGCTGGACCTTCACC +
Preference number: 4 (lower is better)
Translates to: QYANHNPTLPRLDLHPGCTIILP*PGWTFT
Trigger: GGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGT...GCAGCCTGGGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTTAGCATACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
CDS-3UTR CCA 90 bp TGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCACTCTGGCCCGCTGAGCTaGGCTTCTTATGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: WASYAGSPPPFYAMLSSHSGPLS*ASYAGS
Trigger: AGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA...GTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR CCA 90 bp TATAGTTCTACCATGTGCCTTGAAGACAGAGAGCCAGGGATATCTGGTATCAGCGGATCCAGGGTCCTCTaGCCCGCTGAGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: YSSTMCLEDREPGISGISGSRVL*PAELGF
Trigger: GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCC...GCTGATACCAGATATCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAACTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTACTCTGTTGTCGCTCTaGAGTTGGGCATCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PAELGFLCWVSSPFLCHATLLSL*SWASPS
Trigger: ACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGT...AGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466986.5
3UTR CAA 72 bp AGATGGGCACCTCGCCCAATGTGTCCTTCATCTGACTaGATGGTACCAAGCCACTGCAGGAGACACAGCCAT +
Preference number: 4 (lower is better)
Translates to: RWAPRPMCPSSD*MVPSHCRRHSH
Trigger: ATGGCTGTGTCTCCTGCAGTGGCTTGGTACCATCAAGTCAGATGAAGGACACATTGGGCGAGGTGCCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR TCA 90 bp GGTCAAACAGAGCCTACCCATTTTGGGATCTCAGATGGAAATGCAGAAATCACCGGTCCTCTGGCCCGCTaGGCTGGGCTTCTTATGCTG +
Preference number: 4 (lower is better)
Translates to: GQTEPTHFGISDGNAEITGPLAR*AGLLML
Trigger: CAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACC...GGTGATTTCTGCATTTCCATCTGAGATCCCAAAATGGGTAGGCTCTGTTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR GCA 90 bp TGCAGTATGCTAACCATAATCCTACCTTGCCCAGGCTGGACCTTCACCCAGGCTACCATAATCCTACCTTaGCCAGGCTGGACCTTCACC +
Preference number: 4 (lower is better)
Translates to: CSMLTIILPCPGWTFTQATIILP*PGWTFT
Trigger: GGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGT...AGCCTGGGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTTAGCATACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
CDS-3UTR GCA 90 bp CCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCGATGCTGTTGAGAACTaGATCTTCAACAATTCCACA +
Preference number: 4 (lower is better)
Translates to: PDAYSHGSRVLWPAELGFDAVEN*IFNNST
Trigger: TGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATC...GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR GCA 90 bp GAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCAAATCACCCATCTTCTaGGTCGCTCACGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ELGFLCWVSSPFLCHAFFKSPIF*VAHAGS
Trigger: GCTCCCAGCGTGAGCGACGCAGAAGATGGGTGATTT...GAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR CCA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTGTGCACCAAGGATGGTaGGGGGCTCAGTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPVHQGW*GAQWSS
Trigger: ACTGCTCCACTGAGCCCCCCACCATCCTTGGTGCAC...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTCATGGATGTCTCTTCTaGCTGTCTCAGTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: PAELGFLCWVSSPFLCHAHGCLF*LSQCVL
Trigger: AAGAACGCACTGAGACAGCCAGAAGAGACATCCATG...AGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613919.4
CDS-3UTR CCA 90 bp TGCTCCTCAGGTAGACAAGTTGGGTGTTGGGGGCAGGATGGGAAGGAAGTATGTAGACAAGTTGGGTGTTaGGGGCAGGATGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: CSSGRQVGCWGQDGKEVCRQVGC*GQDGKE
Trigger: TTCCTTCCCATCCTGCCCCCAACACCCAACTTGTCT...ACATACTTCCTTCCCATCCTGCCCCCAACACCCAACTTGTCTACCTGAGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623693.3
CDS-3UTR TCA 90 bp TGCTCCTCAGGTAGACAAGTTGGGTGTTGGGGGCAGGATGGGAAGGAAGTATGTGCAGTTGAGGAGGAGTaGCTAATAGGAGAACTAGGG +
Preference number: 4 (lower is better)
Translates to: CSSGRQVGCWGQDGKEVCAVEEE*LIGELG
Trigger: CCCTAGTTCTCCTATTAGTCACTCCTCCTCAACTGC...ACATACTTCCTTCCCATCCTGCCCCCAACACCCAACTTGTCTACCTGAGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623693.3
CDS-3UTR TCA 90 bp GCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCTTGAAGGAGACCAGCTaGTGCATGTCCATGGATGTC +
Preference number: 4 (lower is better)
Translates to: AGLLMLGLLPLFMPCFLPLKETS*CMSMDV
Trigger: GACATCCATGGACATGCATCAGCTGGTCTCCTTCAA...GGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613919.4
CDS-3UTR GCA 90 bp CCGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCGAGCTGGGCTTCTTATaGTGGGTCTCCTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PVMEAYTIGVGGRITLFSELGFL*WVSSPF
Trigger: AAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTC...GGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp GCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCACTTTTCTGGCCCGCTGAGCTaGGCTTCTTATGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ASYAGSPPPFYAMLSSHFSGPLS*ASYAGS
Trigger: AGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA...AAAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR CCA 90 bp GCCTACCCATTTTGGGATCTCAGATGGAAATGCAGAAATCACCCATCTTCTGCGTCTGGCCCGCTGAGCTaGGCTTCTTATGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: AYPFWDLRWKCRNHPSSASGPLS*ASYAGS
Trigger: AGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA...CGCAGAAGATGGGTGATTTCTGCATTTCCATCTGAGATCCCAAAATGGGTAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR CCA 90 bp AACTGCATCTTCAACAATTCCACAAGGTCAAACAGAGCCTACCCATTTTGGGATGGATCCAGGGTCCTCTaGCCCGCTGAGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: NCIFNNSTRSNRAYPFWDGSRVL*PAELGF
Trigger: GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCC...ATCCCAAAATGGGTAGGCTCTGTTTGACCTTGTGGAATTGTTGAAGATGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
CDS-3UTR CCA 90 bp GGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCACTTGGATGCTTACTCTCATaGATCCAGGGTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GFLCWVSSPFLCHAFFPLGCLLS*IQGPLA
Trigger: GGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCC...AAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR CCA 90 bp ATGTGTCCTTCATCTGACTTGATGGTACCAAGCCACTGCAGGAGACACAGCCATTCTCCAGGCAGTAGATaGGCACCTCGCCCAATGTGT +
Preference number: 4 (lower is better)
Translates to: MCPSSDLMVPSHCRRHSHSPGSR*APRPMC
Trigger: ACACATTGGGCGAGGTGCCCATCTACTGCCTGGAGA...ATGGCTGTGTCTCCTGCAGTGGCTTGGTACCATCAAGTCAGATGAAGGACACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR CCA 90 bp CCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTAGAGCCTACCCATTTTaGGATCTTCCAGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: PLSWASYAGSPPPFYAMLRAYPF*DLPDPS
Trigger: GCTTGGATCTGGAAGATCCCAAAATGGGTAGGCTCT...AAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000617133.4
CDS-3UTR CCA 90 bp ATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTTTTTGGGATCTCAGATaGAAATGCAGAAATCACCCA +
Preference number: 4 (lower is better)
Translates to: MDPGSSGPLSWASYAGSPFWDLR*KCRNHP
Trigger: TGGGTGATTTCTGCATTTCCATCTGAGATCCCAAAA...AGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR TCA 90 bp TCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCTTCCAGATCCAAGCATaGCAGTTTAATCTCCATATC +
Preference number: 4 (lower is better)
Translates to: SGPLSWASYAGSPPPFYAFQIQA*QFNLHI
Trigger: GATATGGAGATTAAACTGTCATGCTTGGATCTGGAA...GGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000617133.4
CDS-3UTR TCA 90 bp AAGTGCTCCTCAGGTAGACAAGTTGGGTGTTGGGGGCAGGATGGGAAGGAAGTAAGCTGTAACTTTACATaGCCCATGCCGGATAGATGG +
Preference number: 4 (lower is better)
Translates to: KCSSGRQVGCWGQDGKEVSCNFT*PMPDRW
Trigger: CCATCTATCCGGCATGGGTCATGTAAAGTTACAGCT...TACTTCCTTCCCATCCTGCCCCCAACACCCAACTTGTCTACCTGAGGAGCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623693.3
CDS-3UTR GCA 90 bp AATAACACTTCCTCTTCTACAGGGTCAGGCACCTGGTCACCAGGGTCCTTCCAGCCTGCCCCTGCAAGATaGAATAACACTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: NNTSSSTGSGTWSPGSFQPAPAR*NNTSSS
Trigger: AGAAGAGGAAGTGTTATTGCATCTTGCAGGGGCAGG...CTGGAAGGACCCTGGTGACCAGGTGCCTGACCCTGTAGAAGAGGAAGTGTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449279.5
CDS-3UTR GCA 90 bp GCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCGATCTCAGATGGAAATaGAGAAATCACCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: AYSHGSRVLWPAELGFLCDLRWK*RNHPSS
Trigger: AGAAGATGGGTGATTTCTGCATTTCCATCTGAGATC...GCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR CCA 90 bp CCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTACACAGCACAAATGTTaGAGTCCTGGCAATACATGT +
Preference number: 4 (lower is better)
Translates to: PAELGFLCWVSSPFLCHATQHKC*SPGNTC
Trigger: ACATGTATTGCCAGGACTCCAACATTTGTGCTGTGT...AGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
CDS-3UTR CCA 90 bp CTGACCACTTGGTACAGGAATTCCTGTCAGATGGGTCAACAAGCCTTACAGAACGGATGCTTACTCTCATaGATCCAGGGTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LTTWYRNSCQMGQQALQNGCLLS*IQGPLA
Trigger: GGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCC...GTTCTGTAAGGCTTGTTGACCCATCTGACAGGAATTCCTGTACCAAGTGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CAAGTTTATCTGTTGCTTTGCAAAGGCCGGATGCTTACTCTCATGGATCCAGGGGGATGCTTACTCTCATaGATCCAGGGTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QVYLLLCKGRMLTLMDPGGCLLS*IQGPLA
Trigger: GGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCC...CCCTGGATCCATGAGAGTAAGCATCCGGCCTTTGCAAAGCAACAGATAAACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466986.5
CDS-3UTR CCA 90 bp GAGCCAGGGATATCTGGTATCAGCATGTTTACTTCAATAGATGTGGGCACCATAGTGCACCAAGGATGGTaGGGGGCTCAGTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: EPGISGISMFTSIDVGTIVHQGW*GAQWSS
Trigger: ACTGCTCCACTGAGCCCCCCACCATCCTTGGTGCAC...TATGGTGCCCACATCTATTGAAGTAAACATGCTGATACCAGATATCCCTGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CAA 72 bp CCAACAATACTGCAGTATGCTAACCATAATCCTACCTaGCCCAGGCTGGACCTTCACCCAGGCTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PTILQYANHNPT*PRLDLHPGCSL
Trigger: AAGAGAGCAGCCTGGGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTTAGCATACTGCAGTATTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
CDS-3UTR TCA 90 bp CTGCTCCCATGTTCTTCCACATTGTGTCCTTTCATCCCCACAAACACCCTGTGTCCGCTGCACAAGACTTaGAACAATCCCTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLPCSSTLCPFIPTNTLCPLHKT*NNPSPS
Trigger: TGAAGGAGAGGGATTGTTTCAAGTCTTGTGCAGCGG...ACACAGGGTGTTTGTGGGGATGAAAGGACACAATGTGGAAGAACATGGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR TCA 90 bp GCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCACTTTCCCAGGAGTTTCTCTTaGAGGAGACCAGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: ASYAGSPPPFYAMLSSHFPRSFS*RRPADA
Trigger: TGCATCAGCTGGTCTCCTTCAAGAGAAACTCCTGGG...AAAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR TCA 90 bp TTTTCAATCTTGAAGCCACATGGAGCCCCGATGAGTTTAAGAGAGGGAGTACCTGCAAAGAGTGTTCCATaGCTGGAGCACAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: FSILKPHGAPMSLREGVPAKSVP*LEHREW
Trigger: CCACTCCCTGTGCTCCAGTCATGGAACACTCTTTGC...AGGTACTCCCTCTCTTAAACTCATCGGGGCTCCATGTGGCTTCAAGATTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623498.3
ENST00000623693.3
CDS-3UTR GCA 90 bp TATAGTTCTACCATGTGCCTTGAAGACAGAGAGCCAGGGATATCTGGTATCAGCGAGCTGGGCTTCTTATaGTGGGTCTCCTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: YSSTMCLEDREPGISGISELGFL*WVSSPF
Trigger: AAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTC...GCTGATACCAGATATCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAACTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp CTGCTCCCATGTTCTTCCACATTGTGTCCTTTCATCCCCACAAACACCCTGTGTAGACAGCCAACTTGGTaGTATAGAAGGGCCCCTATC +
Preference number: 4 (lower is better)
Translates to: LLPCSSTLCPFIPTNTLCRQPTW*YRRAPI
Trigger: GATAGGGGCCCTTCTATAGCACCAAGTTGGCTGTCT...ACACAGGGTGTTTGTGGGGATGAAAGGACACAATGTGGAAGAACATGGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR GCA 90 bp TCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGATCTCAGATGGAAATaGAGAAATCACCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SSGPLSWASYAGSPPPFYDLRWK*RNHPSS
Trigger: AGAAGATGGGTGATTTCTGCATTTCCATCTGAGATC...ATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR CCA 90 bp GATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTACAAATGTTGGAGTCCTaGCAATACATGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: DAYSHGSRVLWPAELGFLQMLES*QYMFFL
Trigger: AAGGAAGAACATGTATTGCCAGGACTCCAACATTTG...TAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
CDS-3UTR CCA 90 bp GAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTAAGGGGATCCAGGGTCCTCTaGCCCGCTGAGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: ETTLENGMALSISFVLVRGSRVL*PAELGF
Trigger: GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCC...CCTTACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TATAGTTCTACCATGTGCCTTGAAGACAGAGAGCCAGGGATATCTGGTATCAGCGGATGCTTACTCTCATaGATCCAGGGTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: YSSTMCLEDREPGISGISGCLLS*IQGPLA
Trigger: GGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCC...GCTGATACCAGATATCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAACTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TATAGTTCTACCATGTGCCTTGAAGACAGAGAGCCAGGGATATCTGGTATCAGCGGCTCAGTGGAGCAGTaGAAAGAGTCAGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: YSSTMCLEDREPGISGISGSVEQ*KESGTL
Trigger: CAAGGTCCCTGACTCTTTCCACTGCTCCACTGAGCC...GCTGATACCAGATATCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAACTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356686.2
CDS-3UTR TCA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTGGTCCTCTGGCCCGCTaGGCTGGGCTTCTTATGCTG +
Preference number: 4 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTGPLAR*AGLLML
Trigger: CAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACC...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp CTGACCACTTGGTACAGGAATTCCTGTCAGATGGGTCAACAAGCCTTACAGAACTTCTACCATGTGCCTTaGAGACAGAGAGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LTTWYRNSCQMGQQALQNFYHVP*RQRARD
Trigger: ATCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAA...GTTCTGTAAGGCTTGTTGACCCATCTGACAGGAATTCCTGTACCAAGTGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp CCGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCGGGAAAGCTGAAAAGTaGAGAGGTTTAGTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PVMEAYTIGVGGRITLFSGKAEK*RGLVAG
Trigger: GCCAGCTACTAAACCTCTTCACTTTTCAGCTTTCCC...GGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp ACATTTAGGTGGGGCCATGAACACATACAGGTTGATGATCTGTTAACAGCAGAGGCTGCTCTCTTTGCCTaGAATGCTGTAGCACCACCC +
Preference number: 4 (lower is better)
Translates to: TFRWGHEHIQVDDLLTAEAALFA*NAVAPP
Trigger: GGGTGGTGCTACAGCATTTCAGGCAAAGAGAGCAGC...CTCTGCTGTTAACAGATCATCAACCTGTATGTGTTCATGGCCCCACCTAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488005.5
CDS-3UTR TCA 90 bp CAGGATTTCATCTCTGAAAGGGAACAGGTTCCAGCCTCCTGGGCATGTTCTCCAGTCCTCTTTGTCTTGTaGGTTGATGAGAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: QDFISEREQVPASWACSPVLFVL*VDEKTG
Trigger: TCCTGTCTTCTCATCAACTCACAAGACAAAGAGGAC...TGGAGAACATGCCCAGGAGGCTGGAACCTGTTCCCTTTCAGAGATGAAATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR TCA 90 bp CAGAGCCTACCCATTTTGGGATCTCAGATGGAAATGCAGAAATCACCCATCTTCCCCAGGAGTTTCTCTTaGAGGAGACCAGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: QSLPILGSQMEMQKSPIFPRSFS*RRPADA
Trigger: TGCATCAGCTGGTCTCCTTCAAGAGAAACTCCTGGG...GAAGATGGGTGATTTCTGCATTTCCATCTGAGATCCCAAAATGGGTAGGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR TCA 90 bp AAGTGCTCCTCAGGTAGACAAGTTGGGTGTTGGGGGCAGGATGGGAAGGAAGTAAGCTTATATAAAGCATaGAAGAGAGACCGGAGCATG +
Preference number: 4 (lower is better)
Translates to: KCSSGRQVGCWGQDGKEVSLYKA*KRDRSM
Trigger: CATGCTCCGGTCTCTCTTTCATGCTTTATATAAGCT...TACTTCCTTCCCATCCTGCCCCCAACACCCAACTTGTCTACCTGAGGAGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623693.3
CDS-3UTR GCA 90 bp CTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCATCCTCCCCCTTTTTATaGCATGCTTTCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LGFLCWVSSPFLCHAFFPSSPFL*HAFFPL
Trigger: AAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGA...TGGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR GCA 90 bp CTTCAACAATTCCACAAGGTCAAACAGAGCCTACCCATTTTGGGATCTCAGATGGAGCTGGGCTTCTTATaGTGGGTCTCCTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LQQFHKVKQSLPILGSQMELGFL*WVSSPF
Trigger: AAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTC...CATCTGAGATCCCAAAATGGGTAGGCTCTGTTTGACCTTGTGGAATTGTTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR GCA 90 bp GCAAACACAGCACAAATGTTGGAGTCAACATCTAGTGATGCTGTTGAGAACTGCGAGCTGGGCTTCTTATaGTGGGTCTCCTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: ANTAQMLESTSSDAVENCELGFL*WVSSPF
Trigger: AAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTC...GCAGTTCTCAACAGCATCACTAGATGTTGACTCCAACATTTGTGCTGTGTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000618105.4
CDS-3UTR GCA 90 bp CTGACCACTTGGTACAGGAATTCCTGTCAGATGGGTCAACAAGCCTTACAGAACTGGGCCAGCTCTGAGTaGCACATCCTGAGTGATAAA +
Preference number: 4 (lower is better)
Translates to: LTTWYRNSCQMGQQALQNWASSE*HILSDK
Trigger: TTTATCACTCAGGATGTGGCACTCAGAGCTGGCCCA...GTTCTGTAAGGCTTGTTGACCCATCTGACAGGAATTCCTGTACCAAGTGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTTGGGCCAGCTCTGAGTaGCACATCCTGAGTGATAAA +
Preference number: 4 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPWASSE*HILSDK
Trigger: TTTATCACTCAGGATGTGGCACTCAGAGCTGGCCCA...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp TGCTCCTCAGGTAGACAAGTTGGGTGTTGGGGGCAGGATGGGAAGGAAGTATGTGCATGCTCAAAGAACTaGAAAGAGTGTTCCATGACT +
Preference number: 4 (lower is better)
Translates to: CSSGRQVGCWGQDGKEVCACSKN*KECSMT
Trigger: AGTCATGGAACACTCTTTGCAGTTCTTTGAGCATGC...ACATACTTCCTTCCCATCCTGCCCCCAACACCCAACTTGTCTACCTGAGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623693.3
CDS-3UTR CCA 90 bp TTGTTTCTAACATCTAGTGATGCTGTTGAGAACTGCATCTTCAACAATTCCACAGGATCCAGGGTCCTCTaGCCCGCTGAGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LFLTSSDAVENCIFNNSTGSRVL*PAELGF
Trigger: GAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCC...TGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATCACTAGATGTTAGAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
CDS-3UTR CCA 90 bp ACTGCATCTTCAACAATTCCACAAGGTCAAACAGAGCCTACCCATTTTGGGATCGGATGCTTACTCTCATaGATCCAGGGTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: TASSTIPQGQTEPTHFGIGCLLS*IQGPLA
Trigger: GGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCC...GATCCCAAAATGGGTAGGCTCTGTTTGACCTTGTGGAATTGTTGAAGATGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
CDS-3UTR CCA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTACTCTGTTGTCGCTCTaGAGTTGGGCATCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPTLLSL*SWASPS
Trigger: ACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGT...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TGCAGTATGCTAACCATAATCCTACCTTGCCCAGGCTGGACCTTCACCCAGGCTCTCTTTACATTTAGGTaGGGCCATGAACACATACAG +
Preference number: 4 (lower is better)
Translates to: CSMLTIILPCPGWTFTQALFTFR*GHEHIQ
Trigger: CTGTATGTGTTCATGGCCCCACCTAAATGTAAAGAG...AGCCTGGGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTTAGCATACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
CDS-3UTR CCA 90 bp AAATCACCCATCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGTTCACACAGCACAAATGTTaGAGTCAACATCTAGTGATG +
Preference number: 4 (lower is better)
Translates to: KSPIFCVAHAGSCRLELFTQHKC*SQHLVM
Trigger: CATCACTAGATGTTGACTCCAACATTTGTGCTGTGT...GAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGATGGGTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613919.4
CDS-3UTR CCA 90 bp TGGAGCCCCGATGAGTTTAAGAGAGGGAGTACCTTCTCAGCTGTAACTTTACATCTCTGGGAATGGAGGTaGGCATCTTCTCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: WSPDEFKRGSTFSAVTLHLWEWR*ASSQSC
Trigger: GCAAGACTGAGAAGATGCCCACCTCCATTCCCAGAG...ATGTAAAGTTACAGCTGAGAAGGTACTCCCTCTCTTAAACTCATCGGGGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623498.3
CDS-3UTR CCA 90 bp GAGAACTGCATCTTCAACAATTCCACAAGGTCAAACAGAGCCTACCCATTTTGGCTGGGAGCTGTAGACTaGAGCTGTTCCTATTCGGCC +
Preference number: 4 (lower is better)
Translates to: ENCIFNNSTRSNRAYPFWLGAVD*SCSYSA
Trigger: GGCCGAATAGGAACAGCTCCAGTCTACAGCTCCCAG...CCAAAATGGGTAGGCTCTGTTTGACCTTGTGGAATTGTTGAAGATGCAGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR TCA 90 bp CCGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCGAGATCTTCACTGACTaGCCACTTGGTACAGGAATT +
Preference number: 4 (lower is better)
Translates to: PVMEAYTIGVGGRITLFSEIFTD*PLGTGI
Trigger: AATTCCTGTACCAAGTGGTCAGTCAGTGAAGATCTC...GGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp GCCGGTCCAATCCTTTGGACTTTAAGACAGCTAATCTTGACCAACACTGAAGACTTCCCACTCTCCATCTaGTCCATCATCCTAACACCG +
Preference number: 4 (lower is better)
Translates to: AGPILWTLRQLILTNTEDFPLSI*SIILTP
Trigger: CGGTGTTAGGATGATGGATCAGATGGAGAGTGGGAA...GTCTTCAGTGTTGGTCAAGATTAGCTGTCTTAAAGTCCAAAGGATTGGACCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR TCA 90 bp CTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCAAATCCTCCCCTGACCTaGTTAATTTTGCACTTAAGC +
Preference number: 4 (lower is better)
Translates to: LGFLCWVSSPFLCHAFFPNPPLT*LILHLS
Trigger: GCTTAAGTGCAAAATTAATCAGGTCAGGGGAGGATT...TGGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000617133.4
CDS-3UTR TCA 90 bp ACTCTGGGAATGGAGGTGGGCATCTTCTCAGTCTTGCAGAATGCCATCTTTTATGCAGTTGAGGAGGAGTaGCTAATAGGAGAACTAGGG +
Preference number: 4 (lower is better)
Translates to: TLGMEVGIFSVLQNAIFYAVEEE*LIGELG
Trigger: CCCTAGTTCTCCTATTAGTCACTCCTCCTCAACTGC...ATAAAAGATGGCATTCTGCAAGACTGAGAAGATGCCCACCTCCATTCCCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623498.3
CDS-3UTR TCA 90 bp TCAACAATTCCACAAGGTCAAACAGAGCCTACCCATTTTGGGATCTCAGATGGACCCTCACACAGAGATTaGCACGTTTCCCATATCCCG +
Preference number: 4 (lower is better)
Translates to: STIPQGQTEPTHFGISDGPSHRD*HVSHIP
Trigger: CGGGATATGGGAAACGTGTCAATCTCTGTGTGAGGG...TCCATCTGAGATCCCAAAATGGGTAGGCTCTGTTTGACCTTGTGGAATTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613919.4
CDS-3UTR GCA 90 bp GGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCACTTTCCTCCCCCTTTTTATaGCATGCTTTCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: GFLCWVSSPFLCHAFFPLSSPFL*HAFFPL
Trigger: AAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGA...AAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR GCA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTTTTGCAAAGGCCGGATaGTTACTCTCATGGATCCAG +
Preference number: 4 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPFAKAG*LLSWIQ
Trigger: CTGGATCCATGAGAGTAAGCATCCGGCCTTTGCAAA...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp CTGACCACTTGGTACAGGAATTCCTGTCAGATGGGTCAACAAGCCTTACAGAACAAGTGTTATAGACTATaGTGGGCCAGCTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: LTTWYRNSCQMGQQALQNKCYRL*WASSEC
Trigger: GCACTCAGAGCTGGCCCAGCATAGTCTATAACACTT...GTTCTGTAAGGCTTGTTGACCCATCTGACAGGAATTCCTGTACCAAGTGGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp TGGGGCCATGAACACATACAGGTTGATGATCTGTTAACAGCAGAGGAAAGCACTTCTCTTTGCCTGAAATaGTGTAGCACCACCCCACTC +
Preference number: 4 (lower is better)
Translates to: WGHEHIQVDDLLTAEESTSLCLK*CSTTPL
Trigger: GAGTGGGGTGGTGCTACAGCATTTCAGGCAAAGAGA...AGTGCTTTCCTCTGCTGTTAACAGATCATCAACCTGTATGTGTTCATGGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488005.5
CDS-3UTR CCA 90 bp ATAAAGATCCAGAAATATAGCCGAGGCACAGTGTTAGAGGCAGTAGAGGATATTTCTGGCCCGCTGAGCTaGGCTTCTTATGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: IKIQKYSRGTVLEAVEDISGPLS*ASYAGS
Trigger: AGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA...AATATCCTCTACTGCCTCTAACACTGTGCCTCGGCTATATTTCTGGATCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TCACCCATCCAAATGTATACATCACATTCTCCGGGAGAAACTACTGCTAACATTTCTGGCCCGCTGAGCTaGGCTTCTTATGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SPIQMYTSHSPGETTANISGPLS*ASYAGS
Trigger: AGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGA...AATGTTAGCAGTAGTTTCTCCCGGAGAATGTGATGTATACATTTGGATGGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TTATCTGTTGCTTTGCAAAGGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTTGTCGCTCTGGAGTTaGGCATCTCCAAGTTTATCT +
Preference number: 4 (lower is better)
Translates to: LSVALQRPDAYSHGSRVLLSLWS*ASPSLS
Trigger: AGATAAACTTGGAGATGCCCAACTCCAGAGCGACAA...GAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCTTTGCAAAGCAACAGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
CDS-3UTR CCA 90 bp CTGACCACTTGGTACAGGAATTCCTGTCAGATGGGTCAACAAGCCTTACAGAACCTGGAACCAGCCTGTTaGAGAAGTCACTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LTTWYRNSCQMGQQALQNLEPAC*RSHCLK
Trigger: TTTCAGACAGTGACTTCTCCAACAGGCTGGTTCCAG...GTTCTGTAAGGCTTGTTGACCCATCTGACAGGAATTCCTGTACCAAGTGGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TGTTGGGGGCAGGATGGGAAGGAAGTATGTTCCAATAAAAGAGGACAGCTTATACTCTGGGAATGGAGGTaGGCATCTTCTCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: CWGQDGKEVCSNKRGQLILWEWR*ASSQSC
Trigger: GCAAGACTGAGAAGATGCCCACCTCCATTCCCAGAG...TATAAGCTGTCCTCTTTTATTGGAACATACTTCCTTCCCATCCTGCCCCCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623693.3
CDS-3UTR CCA 90 bp ACAGCAAACACAGCACAAATGTTGGAGTCAACATCTAGTGATGCTGTTGAGAACCCTATTCGGCCATCTTaGCTCCTCCCCCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: TANTAQMLESTSSDAVENPIRPS*LLPQEF
Trigger: AAACTCCTGGGGGAGGAGCCAAGATGGCCGAATAGG...GTTCTCAACAGCATCACTAGATGTTGACTCCAACATTTGTGCTGTGTTTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR TCA 90 bp CCGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCCATAATTCATCTGTCTaGACTTGTCATGTGACCCAC +
Preference number: 4 (lower is better)
Translates to: PVMEAYTIGVGGRITLFSHNSSV*TCHVTH
Trigger: GTGGGTCACATGACAAGTTCAGACAGATGAATTATG...GGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp TGGAGCCCCGATGAGTTTAAGAGAGGGAGTACCTTCTCAGCTGTAACTTTACATTCTGTAGTTCTCGTGTaGGTTAATGAAGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: WSPDEFKRGSTFSAVTLHSVVLV*VNEGLD
Trigger: GTCCAGGCCTTCATTAACTCACACGAGAACTACAGA...ATGTAAAGTTACAGCTGAGAAGGTACTCCCTCTCTTAAACTCATCGGGGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623498.3
CDS-3UTR TCA 90 bp TTTTCAATCTTGAAGCCACATGGAGCCCCGATGAGTTTAAGAGAGGGAGTACCTTCTGTAGTTCTCGTGTaGGTTAATGAAGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: FSILKPHGAPMSLREGVPSVVLV*VNEGLD
Trigger: GTCCAGGCCTTCATTAACTCACACGAGAACTACAGA...AGGTACTCCCTCTCTTAAACTCATCGGGGCTCCATGTGGCTTCAAGATTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623498.3
ENST00000623693.3
CDS-3UTR GCA 90 bp CTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTTCTTCCTTCAGAGCTaGATAGCATCATCTGATGTA +
Preference number: 4 (lower is better)
Translates to: LSWASYAGSPPPFYAMLSFFLQS*IASSDV
Trigger: TACATCAGATGATGCTATGCAGCTCTGAAGGAAGAA...AGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
CDS-3UTR GCA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTGTCTCTCTAGAGGCTTaGTTACAAACAACTAGGCTG +
Preference number: 4 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPVSLEA*LQTTRL
Trigger: CAGCCTAGTTGTTTGTAAGCAAGCCTCTAGAGAGAC...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp AGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCGATGCTGTTGAGAACTaGATCTTCAACAATTCCACA +
Preference number: 4 (lower is better)
Translates to: SWASYAGSPPPFYAMLSSDAVEN*IFNNST
Trigger: TGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATC...GGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS-3UTR GCA 90 bp TTCAATCTTGAAGCCACATGGAGCCCCGATGAGTTTAAGAGAGGGAGTACCTTCACTTTACATGACCCATaGCGGATAGATGGATGGATG +
Preference number: 4 (lower is better)
Translates to: FNLEATWSPDEFKRGSTFTLHDP*RIDGWM
Trigger: CATCCATCCATCTATCCGGCATGGGTCATGTAAAGT...GAAGGTACTCCCTCTCTTAAACTCATCGGGGCTCCATGTGGCTTCAAGATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623498.3
ENST00000623693.3
CDS-3UTR GCA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCAAAAGAGTCAGGGACCTaGAGACCCAGGCTAACTCTG +
Preference number: 4 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPKESGT*RPRLTL
Trigger: CAGAGTTAGCCTGGGTCTGCAGGTCCCTGACTCTTT...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615352.4
CDS-3UTR GCA 90 bp TTTTCAATCTTGAAGCCACATGGAGCCCCGATGAGTTTAAGAGAGGGAGTACCTAGAGAGACCGGAGCATaGTCAAAGAACTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: FSILKPHGAPMSLREGVPRETGA*SKNCKE
Trigger: CTCTTTGCAGTTCTTTGAGCATGCTCCGGTCTCTCT...AGGTACTCCCTCTCTTAAACTCATCGGGGCTCCATGTGGCTTCAAGATTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623693.3
CDS-3UTR GCA 90 bp AGTGCTCCTCAGGTAGACAAGTTGGGTGTTGGGGGCAGGATGGGAAGGAAGTATTTAACAATGACTAAGTaGTCCTCAGGTAGACAAGTT +
Preference number: 4 (lower is better)
Translates to: SAPQVDKLGVGGRMGRKYLTMTK*SSGRQV
Trigger: AACTTGTCTACCTGAGGAGCACTTAGTCATTGTTAA...ATACTTCCTTCCCATCCTGCCCCCAACACCCAACTTGTCTACCTGAGGAGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623693.3
CDS-3UTR CCA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTTTGTCGCTCTGGAGTTaGGCATCTCCAAGTTTATCT +
Preference number: 4 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPLSLWS*ASPSLS
Trigger: AGATAAACTTGGAGATGCCCAACTCCAGAGCGACAA...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TGTTGGGGGCAGGATGGGAAGGAAGTATGTTCCAATAAAAGAGGACAGCTTATAGTGTTGGGGGCAGGATaGGAAGGAAGTATGTTCCAA +
Preference number: 4 (lower is better)
Translates to: CWGQDGKEVCSNKRGQLIVLGAG*EGSMFQ
Trigger: TTGGAACATACTTCCTTCCCATCCTGCCCCCAACAC...TATAAGCTGTCCTCTTTTATTGGAACATACTTCCTTCCCATCCTGCCCCCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000623693.3
3UTR CAA 72 bp GTTACCAGTGGAAAGAGATCTTCACTGACTGACCACTaGGTACAGGAATTCCTGTCAGATGGGTCAACAAGC +
Preference number: 4 (lower is better)
Translates to: VTSGKRSSLTDH*VQEFLSDGSTS
Trigger: GCTTGTTGACCCATCTGACAGGAATTCCTGTACCAAGTGGTCAGTCAGTGAAGATCTCTTTCCACTGGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CAA 72 bp AAGTTGAACCAAGCCCTGCTCCCATGTTCTTCCACATaGTGTCCTTTCATCCCCACAAACACCCTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: KLNQALLPCSST*CPFIPTNTLCN
Trigger: ATTACACAGGGTGTTTGTGGGGATGAAAGGACACAATGTGGAAGAACATGGGAGCAGGGCTTGGTTCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR TCA 90 bp CAGGTTTTGAAAGGTCACCTTATAAATGTCAGCAAATGTTGCCTAAGCTATCAATACCGCCTCCGACGCTaGCGCTACCATAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: QVLKGHLINVSKCCLSYQYRLRR*RYHRDL
Trigger: CAAGTCTCTATGGTAGCGTCAGCGTCGGAGGCGGTA...TTGATAGCTTAGGCAACATTTGCTGACATTTATAAGGTGACCTTTCAAAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248566.3
CDS-3UTR TCA 90 bp CCTTCAAGTAAGCCCCTGTTATGTAGCTACAGGAAGTATCATAATCTCTTACTAGCTGCTCTCTTTGCCTaGAATGCTGTAGCACCACCC +
Preference number: 4 (lower is better)
Translates to: PSSKPLLCSYRKYHNLLLAALFA*NAVAPP
Trigger: GGGTGGTGCTACAGCATTTCAGGCAAAGAGAGCAGC...TAGTAAGAGATTATGATACTTCCTGTAGCTACATAACAGGGGCTTACTTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
CDS-3UTR TCA 90 bp GCCGGTCCAATCCTTTGGACTTTAAGACAGCTAATCTTGACCAACACTGAAGACAATGTGTCCTTCATCTaGCTTGATGGTACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: AGPILWTLRQLILTNTEDNVSFI*LDGTKP
Trigger: TGGCTTGGTACCATCAAGTCAGATGAAGGACACATT...GTCTTCAGTGTTGGTCAAGATTAGCTGTCTTAAAGTCCAAAGGATTGGACCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR TCA 90 bp GCATCTTCTCAGTCTTGCAGAATGCCATCTTTTATGGGTAGAGATGATGCTGTGAGCTGTAACTTTACATaGCCCATGCCGGATAGATGG +
Preference number: 4 (lower is better)
Translates to: ASSQSCRMPSFMGRDDAVSCNFT*PMPDRW
Trigger: CCATCTATCCGGCATGGGTCATGTAAAGTTACAGCT...CACAGCATCATCTCTACCCATAAAAGATGGCATTCTGCAAGACTGAGAAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623498.3
CDS-3UTR TCA 90 bp TTCAATCTTGAAGCCACATGGAGCCCCGATGAGTTTAAGAGAGGGAGTACCTTCGAGTGGGCACACTCTTaGGAGCTTAAGTTTATATAC +
Preference number: 4 (lower is better)
Translates to: FNLEATWSPDEFKRGSTFEWAHS*ELKFIY
Trigger: GTATATAAACTTAAGCTCTCAAGAGTGTGCCCACTC...GAAGGTACTCCCTCTCTTAAACTCATCGGGGCTCCATGTGGCTTCAAGATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623498.3
ENST00000623693.3
CDS-3UTR GCA 90 bp TATAGTTCTACCATGTGCCTTGAAGACAGAGAGCCAGGGATATCTGGTATCAGCTCCTCCCCCTTTTTATaGCATGCTTTCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: YSSTMCLEDREPGISGISSSPFL*HAFFPL
Trigger: AAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGA...GCTGATACCAGATATCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAACTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp TCACCCATCCAAATGTATACATCACATTCTCCGGGAGAAACTACTGCTAACATTTTCTTGAGGTGGAGCTaGAGACCCAGGCTAACTCTG +
Preference number: 4 (lower is better)
Translates to: SPIQMYTSHSPGETTANIFLRWS*RPRLTL
Trigger: CAGAGTTAGCCTGGGTCTGCAGCTCCACCTCAAGAA...AATGTTAGCAGTAGTTTCTCCCGGAGAATGTGATGTATACATTTGGATGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356686.2
CDS-3UTR GCA 90 bp AATAGGGTCACCCTTCAAGTAAGCCCCTGTTATGTAGCTACAGGAAGTATCATATCTCTTTGCCTGAAATaGTGTAGCACCACCCCACTC +
Preference number: 4 (lower is better)
Translates to: NRVTLQVSPCYVATGSIISLCLK*CSTTPL
Trigger: GAGTGGGGTGGTGCTACAGCATTTCAGGCAAAGAGA...TATGATACTTCCTGTAGCTACATAACAGGGGCTTACTTGAAGGGTGACCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
CDS-3UTR CCA 90 bp CACAAGGTCAAACAGAGCCTACCCATTTTGGGATCTTCCAGATCCAAGCATGACACACAGCACAAATGTTaGAGTCCTGGCAATACATGT +
Preference number: 4 (lower is better)
Translates to: HKVKQSLPILGSSRSKHDTQHKC*SPGNTC
Trigger: ACATGTATTGCCAGGACTCCAACATTTGTGCTGTGT...GTCATGCTTGGATCTGGAAGATCCCAAAATGGGTAGGCTCTGTTTGACCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617133.4
CDS-3UTR CCA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTTCATCACAGCAGAAGTaGAAAGACTCTTCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPSSQQK*KDSSVV
Trigger: GACAACAGAAGAGTCTTTCCACTTCTGCTGTGATGA...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp GAGCCAGGGATATCTGGTATCAGCATGTTTACTTCAATAGATGTGGGCACCATAAATGTTTCCCGGTCATaGAGGCTTATACCATCGGTG +
Preference number: 4 (lower is better)
Translates to: EPGISGISMFTSIDVGTINVSRS*RLIPSV
Trigger: CACCGATGGTATAAGCCTCCATGACCGGGAAACATT...TATGGTGCCCACATCTATTGAAGTAAACATGCTGATACCAGATATCCCTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp GTTTCTCTTGAAGGAGACCAGCTGATGCATGTCCATGGATGTCTCTTCTGGCTGTTTTGGGATCTCAGATaGAAATGCAGAAATCACCCA +
Preference number: 4 (lower is better)
Translates to: VSLEGDQLMHVHGCLFWLFWDLR*KCRNHP
Trigger: TGGGTGATTTCTGCATTTCCATCTGAGATCCCAAAA...CAGCCAGAAGAGACATCCATGGACATGCATCAGCTGGTCTCCTTCAAGAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613919.4
CDS-3UTR CCA 90 bp TTTTCAATCTTGAAGCCACATGGAGCCCCGATGAGTTTAAGAGAGGGAGTACCTAATCTTGAAGCCACATaGAGCCCCGATGAGTTTAAG +
Preference number: 4 (lower is better)
Translates to: FSILKPHGAPMSLREGVPNLEAT*SPDEFK
Trigger: CTTAAACTCATCGGGGCTCCATGTGGCTTCAAGATT...AGGTACTCCCTCTCTTAAACTCATCGGGGCTCCATGTGGCTTCAAGATTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000623498.3
ENST00000623693.3
CDS-3UTR CCA 90 bp ATCTTGAAGCCACATGGAGCCCCGATGAGTTTAAGAGAGGGAGTACCTTCTCAGCAAGGAGGAAAAACTTaGACTGGGTCTTTAACAATG +
Preference number: 4 (lower is better)
Translates to: ILKPHGAPMSLREGVPSQQGGKT*TGSLTM
Trigger: CATTGTTAAAGACCCAGTCCAAGTTTTTCCTCCTTG...CTGAGAAGGTACTCCCTCTCTTAAACTCATCGGGGCTCCATGTGGCTTCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623693.3
3UTR CAA 72 bp TCTACTGGGCTCTATTTTCACTCTGGAACCAGCCTGTaGGAGAAGTCACTGTCTGAAACATTGTCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: STGLYFHSGTSL*EKSLSETLSVV
Trigger: CACAACTGACAATGTTTCAGACAGTGACTTCTCCAACAGGCTGGTTCCAGAGTGAAAATAGAGCCCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CAA 72 bp GCCGGTCCAATCCTTTGGACTTTAAGACAGCTAATCTaGACCAACACTGAAGACAGCCAACTTGGTGCTATA +
Preference number: 4 (lower is better)
Translates to: AGPILWTLRQLI*TNTEDSQLGAI
Trigger: TATAGCACCAAGTTGGCTGTCTTCAGTGTTGGTCAAGATTAGCTGTCTTAAAGTCCAAAGGATTGGACCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR TCA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCAGGGAAAGCTGAAAAGTaGAGAGGTTTAGTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPGKAEK*RGLVAG
Trigger: GCCAGCTACTAAACCTCTTCACTTTTCAGCTTTCCC...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp CCTTCAAGTAAGCCCCTGTTATGTAGCTACAGGAAGTATCATAATCTCTTACTACCACTCCCTCCTTACTaGCTCCATGCACATATCCAC +
Preference number: 4 (lower is better)
Translates to: PSSKPLLCSYRKYHNLLLPLPPY*LHAHIH
Trigger: GTGGATATGTGCATGGAGTCAGTAAGGAGGGAGTGG...TAGTAAGAGATTATGATACTTCCTGTAGCTACATAACAGGGGCTTACTTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
CDS-3UTR TCA 90 bp ATGTGTCCTTCATCTGACTTGATGGTACCAAGCCACTGCAGGAGACACAGCCATAGCCCACTAGTTCCATaGAATATTAGTAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: MCPSSDLMVPSHCRRHSHSPLVP*NISNVS
Trigger: GGAAACATTACTAATATTTCATGGAACTAGTGGGCT...ATGGCTGTGTCTCCTGCAGTGGCTTGGTACCATCAAGTCAGATGAAGGACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR GCA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTTTCTTCCTTCAGAGCTaGATAGCATCATCTGATGTA +
Preference number: 4 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPFFLQS*IASSDV
Trigger: TACATCAGATGATGCTATGCAGCTCTGAAGGAAGAA...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp CTGACCACTTGGTACAGGAATTCCTGTCAGATGGGTCAACAAGCCTTACAGAACTTCTTCCTTCAGAGCTaGATAGCATCATCTGATGTA +
Preference number: 4 (lower is better)
Translates to: LTTWYRNSCQMGQQALQNFFLQS*IASSDV
Trigger: TACATCAGATGATGCTATGCAGCTCTGAAGGAAGAA...GTTCTGTAAGGCTTGTTGACCCATCTGACAGGAATTCCTGTACCAAGTGGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp GAGTCCTGGCAATACATGTTCTTCCTTCAGAGCTGCATAGCATCATCTGATGTATCCTCCCCCTTTTTATaGCATGCTTTCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: ESWQYMFFLQSCIASSDVSSPFL*HAFFPL
Trigger: AAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGA...TACATCAGATGATGCTATGCAGCTCTGAAGGAAGAACATGTATTGCCAGGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
CDS-3UTR GCA 90 bp ATGTTCTTCCTTCAGAGCTGCATAGCATCATCTGATGTATTTGTTTCTAACATCGAGCTGGGCTTCTTATaGTGGGTCTCCTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: MFFLQSCIASSDVFVSNIELGFL*WVSSPF
Trigger: AAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTC...GATGTTAGAAACAAATACATCAGATGATGCTATGCAGCTCTGAAGGAAGAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
CDS-3UTR GCA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCACTAGCAAGTTCTTTCTaGTGGGGCCAGATTGTAGAG +
Preference number: 4 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPLASSF*WGQIVE
Trigger: CTCTACAATCTGGCCCCAGCAGAAAGAACTTGCTAG...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp GAGCCAGGGATATCTGGTATCAGCATGTTTACTTCAATAGATGTGGGCACCATAGTCTCTCTAGAGGCTTaGTTACAAACAACTAGGCTG +
Preference number: 4 (lower is better)
Translates to: EPGISGISMFTSIDVGTIVSLEA*LQTTRL
Trigger: CAGCCTAGTTGTTTGTAAGCAAGCCTCTAGAGAGAC...TATGGTGCCCACATCTATTGAAGTAAACATGCTGATACCAGATATCCCTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp GAATGGAGGTGGGCATCTTCTCAGTCTTGCAGAATGCCATCTTTTATGGGTAGACTCAGTCTTGCAGAATaGCATCTTTTATGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: EWRWASSQSCRMPSFMGRLSLAE*HLLWVE
Trigger: CTCTACCCATAAAAGATGGCATTCTGCAAGACTGAG...TCTACCCATAAAAGATGGCATTCTGCAAGACTGAGAAGATGCCCACCTCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623498.3
CDS-3UTR GCA 90 bp GTTGGGGGCAGGATGGGAAGGAAGTATGTTCCAATAAAAGAGGACAGCTTATATACTTTACATGACCCATaGCGGATAGATGGATGGATG +
Preference number: 4 (lower is better)
Translates to: VGGRMGRKYVPIKEDSLYTLHDP*RIDGWM
Trigger: CATCCATCCATCTATCCGGCATGGGTCATGTAAAGT...ATATAAGCTGTCCTCTTTTATTGGAACATACTTCCTTCCCATCCTGCCCCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623693.3
CDS-3UTR CCA 90 bp TCACCCATCCAAATGTATACATCACATTCTCCGGGAGAAACTACTGCTAACATTACTCTGTTGTCGCTCTaGAGTTGGGCATCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SPIQMYTSHSPGETTANITLLSL*SWASPS
Trigger: ACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGT...AATGTTAGCAGTAGTTTCTCCCGGAGAATGTGATGTATACATTTGGATGGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TCACCCATCCAAATGTATACATCACATTCTCCGGGAGAAACTACTGCTAACATTGCAAGTTCTTTCTGCTaGGGCCAGATTGTAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SPIQMYTSHSPGETTANIASSFC*GQIVEV
Trigger: GACCTCTACAATCTGGCCCCAGCAGAAAGAACTTGC...AATGTTAGCAGTAGTTTCTCCCGGAGAATGTGATGTATACATTTGGATGGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTTCATATTTGTTAGGATaGGTAAGGTTGTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPSYLLG*VRLCCS
Trigger: ACTGCAGCACAACCTTACCCATCCTAACAAATATGA...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTTTATACCATCGGTGTTaGAGGAAGGATTACGTTGTT +
Preference number: 4 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPLYHRC*RKDYVV
Trigger: AACAACGTAATCCTTCCTCCAACACCGATGGTATAA...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCAAATGTTTCCCGGTCATaGAGGCTTATACCATCGGTG +
Preference number: 4 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPNVSRS*RLIPSV
Trigger: CACCGATGGTATAAGCCTCCATGACCGGGAAACATT...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp GCATCTTCTCAGTCTTGCAGAATGCCATCTTTTATGGGTAGAGATGATGCTGTGAATCTTGAAGCCACATaGAGCCCCGATGAGTTTAAG +
Preference number: 4 (lower is better)
Translates to: ASSQSCRMPSFMGRDDAVNLEAT*SPDEFK
Trigger: CTTAAACTCATCGGGGCTCCATGTGGCTTCAAGATT...CACAGCATCATCTCTACCCATAAAAGATGGCATTCTGCAAGACTGAGAAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623498.3
3UTR CAA 72 bp AAGACTTCTGCAGATCACTTCTGTGCCAGTATCCCATaGTCATCTGGTCCCAGTGTTTACTTGTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: KTSADHFCASIP*SSGPSVYLSRR
Trigger: TCTTCTTGACAAGTAAACACTGGGACCAGATGACAATGGGATACTGGCACAGAAGTGATCTGCAGAAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR TCA 90 bp GAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTAAGGTTCTACCATGTGCCTTaGAGACAGAGAGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: ETTLENGMALSISFVLVRFYHVP*RQRARD
Trigger: ATCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAA...CCTTACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp ATAAAGATCCAGAAATATAGCCGAGGCACAGTGTTAGAGGCAGTAGAGGATATTGAAAGAGATCTTCACTaGCTGACCACTTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: IKIQKYSRGTVLEAVEDIERDLH*LTTWYR
Trigger: CCTGTACCAAGTGGTCAGTCAGTGAAGATCTCTTTC...AATATCCTCTACTGCCTCTAACACTGTGCCTCGGCTATATTTCTGGATCTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp ACTTTAAGACAGCTAATCTTGACCAACACTGAAGACAGCCAACTTGGTGCTATAAATCTTGACCAACACTaGAGACAGCCAACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: TLRQLILTNTEDSQLGAINLDQH*RQPTWC
Trigger: GCACCAAGTTGGCTGTCTTCAGTGTTGGTCAAGATT...TATAGCACCAAGTTGGCTGTCTTCAGTGTTGGTCAAGATTAGCTGTCTTAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR TCA 90 bp GTCACCCTTCAAGTAAGCCCCTGTTATGTAGCTACAGGAAGTATCATAATCTCTGACATGACTTTCCACTaGACACTGGTGACTGAAACA +
Preference number: 4 (lower is better)
Translates to: VTLQVSPCYVATGSIIISDMTFH*TLVTET
Trigger: TGTTTCAGTCACCAGTGTTCAGTGGAAAGTCATGTC...AGAGATTATGATACTTCCTGTAGCTACATAACAGGGGCTTACTTGAAGGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488005.5
CDS-3UTR TCA 90 bp GCATCTTCTCAGTCTTGCAGAATGCCATCTTTTATGGGTAGAGATGATGCTGTGGAGTGGGCACACTCTTaGGAGCTTAAGTTTATATAC +
Preference number: 4 (lower is better)
Translates to: ASSQSCRMPSFMGRDDAVEWAHS*ELKFIY
Trigger: GTATATAAACTTAAGCTCTCAAGAGTGTGCCCACTC...CACAGCATCATCTCTACCCATAAAAGATGGCATTCTGCAAGACTGAGAAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623498.3
CDS-3UTR GCA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCATCCTCCCCCTTTTTATaGCATGCTTTCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPSSPFL*HAFFPL
Trigger: AAGTGGGAAGAAAGCATGGCATAAAAAGGGGGAGGA...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp GTCACCCTTCAAGTAAGCCCCTGTTATGTAGCTACAGGAAGTATCATAATCTCTAGCTCTCCAATCCTGTaGATCCCAGCTCTTTACATT +
Preference number: 4 (lower is better)
Translates to: VTLQVSPCYVATGSIIISSSPIL*IPALYI
Trigger: AATGTAAAGAGCTGGGATGCACAGGATTGGAGAGCT...AGAGATTATGATACTTCCTGTAGCTACATAACAGGGGCTTACTTGAAGGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
CDS-3UTR GCA 90 bp CTGCTCCCATGTTCTTCCACATTGTGTCCTTTCATCCCCACAAACACCCTGTGTAAGCCATCAATAAGCTaGTACTTCCAACAATATATG +
Preference number: 4 (lower is better)
Translates to: LLPCSSTLCPFIPTNTLCKPSIS*YFQQYM
Trigger: CATATATTGTTGGAAGTAGCAGCTTATTGATGGCTT...ACACAGGGTGTTTGTGGGGATGAAAGGACACAATGTGGAAGAACATGGGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR GCA 90 bp CCACAAGGTCAAACAGAGCCTACCCATTTTGGGATCTCAGATGGAAATGCAGAAGATGCTGTTGAGAACTaGATCTTCAACAATTCCACA +
Preference number: 4 (lower is better)
Translates to: PQGQTEPTHFGISDGNAEDAVEN*IFNNST
Trigger: TGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATC...TTCTGCATTTCCATCTGAGATCCCAAAATGGGTAGGCTCTGTTTGACCTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR GCA 90 bp GTTGGGGGCAGGATGGGAAGGAAGTATGTTCCAATAAAAGAGGACAGCTTATATCTCAGTCTTGCAGAATaGCATCTTTTATGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VGGRMGRKYVPIKEDSLYLSLAE*HLLWVE
Trigger: CTCTACCCATAAAAGATGGCATTCTGCAAGACTGAG...ATATAAGCTGTCCTCTTTTATTGGAACATACTTCCTTCCCATCCTGCCCCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623693.3
CDS-3UTR CCA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCAGCTCTATTTTCACTCTaGAACCAGCCTGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPALFSL*NQPVGE
Trigger: TTCTCCAACAGGCTGGTTCCAGAGTGAAAATAGAGC...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCAAGCTACAGACTCTACTaGGCTCTATTTTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPSYRLY*ALFSLW
Trigger: CCAGAGTGAAAATAGAGCCCAGTAGAGTCTGTAGCT...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp GAGCCAGGGATATCTGGTATCAGCATGTTTACTTCAATAGATGTGGGCACCATAAAGAGGTTTAGTAGCTaGCTTTATGCCACATGGGTA +
Preference number: 4 (lower is better)
Translates to: EPGISGISMFTSIDVGTIKRFSS*LYATWV
Trigger: TACCCATGTGGCATAAAGCCAGCTACTAAACCTCTT...TATGGTGCCCACATCTATTGAAGTAAACATGCTGATACCAGATATCCCTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp GAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTAAGGTGTTATAGACTATGCTaGGCCAGCTCTGAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: ETTLENGMALSISFVLVRCYRLC*ASSECH
Trigger: GTGGCACTCAGAGCTGGCCCAGCATAGTCTATAACA...CCTTACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TATGTAGACAGCAACAAGACTTCTGCAGATCACTTCTGTGCCAGTATCCCATTGTATCCCATTGTCATCTaGTCCCAGTGTTTACTTGTC +
Preference number: 4 (lower is better)
Translates to: YVDSNKTSADHFCASIPLYPIVI*SQCLLV
Trigger: GACAAGTAAACACTGGGACCAGATGACAATGGGATA...CAATGGGATACTGGCACAGAAGTGATCTGCAGAAGTCTTGTTGCTGTCTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR CCA 90 bp CCACAAGGTCAAACAGAGCCTACCCATTTTGGGATCTCAGATGGAAATGCAGAAACACAGCACAAATGTTaGAGTCAACATCTAGTGATG +
Preference number: 4 (lower is better)
Translates to: PQGQTEPTHFGISDGNAETQHKC*SQHLVM
Trigger: CATCACTAGATGTTGACTCCAACATTTGTGCTGTGT...TTCTGCATTTCCATCTGAGATCCCAAAATGGGTAGGCTCTGTTTGACCTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
3UTR CAA 72 bp AATGTTTCCCGGTCATGGAGGCTTATACCATCGGTGTaGGAGGAAGGATTACGTTGTTTTCCTAATGGATAT +
Preference number: 4 (lower is better)
Translates to: NVSRSWRLIPSV*EEGLRCFPNGY
Trigger: ATATCCATTAGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGGGAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp CCTAGAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTGAAAGAGATCTTCACTaGCTGACCACTTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: PRNYFGKWHGFVHFLCVSERDLH*LTTWYR
Trigger: CCTGTACCAAGTGGTCAGTCAGTGAAGATCTCTTTC...ACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp AGCTGCTACTTCCAACAATATATGAAGTCATGGAACACATATGTGTATGTAGACGTCCTTCATCTGACTTaGTGGTACCAAGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: SCYFQQYMKSWNTYVYVDVLHLT*WYQATA
Trigger: TGCAGTGGCTTGGTACCATCAAGTCAGATGAAGGAC...GTCTACATACACATATGTGTTCCATGACTTCATATATTGTTGGAAGTAGCAGCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR TCA 90 bp TATGAAGTCATGGAACACATATGTGTATGTAGACAGCAACAAGACTTCTGCAGAACAGGATTTCATCTCTaGAAGGGAACAGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: YEVMEHICVCRQQQDFCRTGFHL*KGTGSS
Trigger: GCTGGAACCTGTTCCCTTTCAGAGATGAAATCCTGT...TCTGCAGAAGTCTTGTTGCTGTCTACATACACATATGTGTTCCATGACTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR GCA 90 bp CAAATGTTGGAGTCCTGGCAATACATGTTCTTCCTTCAGAGCTGCATAGCATCATTCTTCCTTCAGAGCTaGATAGCATCATCTGATGTA +
Preference number: 4 (lower is better)
Translates to: QMLESWQYMFFLQSCIASFFLQS*IASSDV
Trigger: TACATCAGATGATGCTATGCAGCTCTGAAGGAAGAA...TGATGCTATGCAGCTCTGAAGGAAGAACATGTATTGCCAGGACTCCAACATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
CDS-3UTR GCA 90 bp GAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTAAGGTTTGCAAAGGCCGGATaGTTACTCTCATGGATCCAG +
Preference number: 4 (lower is better)
Translates to: ETTLENGMALSISFVLVRFAKAG*LLSWIQ
Trigger: CTGGATCCATGAGAGTAAGCATCCGGCCTTTGCAAA...CCTTACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp TCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCCAAGTTTATCTGTTaGTTTGCAAAGGCCGGATGC +
Preference number: 4 (lower is better)
Translates to: STSLTELNSLNLGANVSRSKFIC*FAKAGC
Trigger: GCATCCGGCCTTTGCAAAGCAACAGATAAACTTGGA...CCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTCTAGCAAGTTCTTTCTaGTGGGGCCAGATTGTAGAG +
Preference number: 4 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTLASSF*WGQIVE
Trigger: CTCTACAATCTGGCCCCAGCAGAAAGAACTTGCTAG...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTAAGTGTTATAGACTATaGTGGGCCAGCTCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTKCYRL*WASSEC
Trigger: GCACTCAGAGCTGGCCCAGCATAGTCTATAACACTT...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCAACACAGCACAAATGTTaGAGTCCTGGCAATACATGT +
Preference number: 4 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPTQHKC*SPGNTC
Trigger: ACATGTATTGCCAGGACTCCAACATTTGTGCTGTGT...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCATCATCACAGCAGAAGTaGAAAGACTCTTCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPSSQQK*KDSSVV
Trigger: GACAACAGAAGAGTCTTTCCACTTCTGCTGTGATGA...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp GAGCCAGGGATATCTGGTATCAGCATGTTTACTTCAATAGATGTGGGCACCATATTATACCATCGGTGTTaGAGGAAGGATTACGTTGTT +
Preference number: 4 (lower is better)
Translates to: EPGISGISMFTSIDVGTILYHRC*RKDYVV
Trigger: AACAACGTAATCCTTCCTCCAACACCGATGGTATAA...TATGGTGCCCACATCTATTGAAGTAAACATGCTGATACCAGATATCCCTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
3UTR CAA 72 bp CAGCACAAATGTTGGAGTCAACATCTAGTGATGCTGTaGAGAACTGCATCTTCAACAATTCCACAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: QHKCWSQHLVML*RTASSTIPQGQ
Trigger: TTGACCTTGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATCACTAGATGTTGACTCCAACATTTGTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000618105.4
CDS-3UTR TCA 90 bp ATAAAGATCCAGAAATATAGCCGAGGCACAGTGTTAGAGGCAGTAGAGGATATTTTCCATCTCTGCTATTaGTATGCTGCTAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: IKIQKYSRGTVLEAVEDIFHLCY*YAASKF
Trigger: GAACTTGCTAGCAGCATATCAATAGCAGAGATGGAA...AATATCCTCTACTGCCTCTAACACTGTGCCTCGGCTATATTTCTGGATCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTGAGATCTTCACTGACTaGCCACTTGGTACAGGAATT +
Preference number: 4 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTEIFTD*PLGTGI
Trigger: AATTCCTGTACCAAGTGGTCAGTCAGTGAAGATCTC...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp TCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGGTTTATCTGTTGCTTTaGAAAGGCCGGATGCTTACT +
Preference number: 4 (lower is better)
Translates to: STSLTELNSLNLGANVSRVYLLL*KGRMLT
Trigger: AGTAAGCATCCGGCCTTTGCAAAGCAACAGATAAAC...CCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp CAGCAAACACAGCACAAATGTTGGAGTCAACATCTAGTGATGCTGTTGAGAACTGATGCTGTTGAGAACTaGATCTTCAACAATTCCACA +
Preference number: 4 (lower is better)
Translates to: QQTQHKCWSQHLVMLLRTDAVEN*IFNNST
Trigger: TGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATC...AGTTCTCAACAGCATCACTAGATGTTGACTCCAACATTTGTGCTGTGTTTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000618105.4
CDS-3UTR CCA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTTTGTCGCTCTGGAGTTaGGCATCTCCAAGTTTATCT +
Preference number: 4 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTLSLWS*ASPSLS
Trigger: AGATAAACTTGGAGATGCCCAACTCCAGAGCGACAA...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp AGTGGTAGAGAAAGAACTATTTCCAGAGGCTGCTGCTATCTAATATTAAGATATGCAAGTTCTTTCTGCTaGGGCCAGATTGTAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SGRERTISRGCCYLILRYASSFC*GQIVEV
Trigger: GACCTCTACAATCTGGCCCCAGCAGAAAGAACTTGC...ATATCTTAATATTAGATAGCAGCAGCCTCTGGAAATAGTTCTTTCTCTACCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CCTAGAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTGCTCTATTTTCACTCTaGAACCAGCCTGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PRNYFGKWHGFVHFLCVSALFSL*NQPVGE
Trigger: TTCTCCAACAGGCTGGTTCCAGAGTGAAAATAGAGC...ACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TGGGTCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCAGCTACAGACTCTACTaGGCTCTATTTTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: WVNKPYRTKFFKLGGKCFSYRLY*ALFSLW
Trigger: CCAGAGTGAAAATAGAGCCCAGTAGAGTCTGTAGCT...GAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TATAGTTCTACCATGTGCCTTGAAGACAGAGAGCCAGGGATATCTGGTATCAGCTGGATTAGCCTGTTCTaGATTAGTTCAAATTTACAG +
Preference number: 4 (lower is better)
Translates to: YSSTMCLEDREPGISGISWISLF*ISSNLQ
Trigger: CTGTAAATTTGAACTAATCCAGAACAGGCTAATCCA...GCTGATACCAGATATCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAACTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CAAACACAGCACAAATGTTGGAGTCAACATCTAGTGATGCTGTTGAGAACTGCAACACAGCACAAATGTTaGAGTCAACATCTAGTGATG +
Preference number: 4 (lower is better)
Translates to: QTQHKCWSQHLVMLLRTATQHKC*SQHLVM
Trigger: CATCACTAGATGTTGACTCCAACATTTGTGCTGTGT...TGCAGTTCTCAACAGCATCACTAGATGTTGACTCCAACATTTGTGCTGTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000618105.4
CDS-3UTR TCA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTTTCCATCTCTGCTATTaGTATGCTGCTAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTFHLCY*YAASKF
Trigger: GAACTTGCTAGCAGCATATCAATAGCAGAGATGGAA...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp GAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTAAGGCATAATTCATCTGTCTaGACTTGTCATGTGACCCAC +
Preference number: 4 (lower is better)
Translates to: ETTLENGMALSISFVLVRHNSSV*TCHVTH
Trigger: GTGGGTCACATGACAAGTTCAGACAGATGAATTATG...CCTTACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTGTTTATCTGTTGCTTTaGAAAGGCCGGATGCTTACT +
Preference number: 4 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTVYLLL*KGRMLT
Trigger: AGTAAGCATCCGGCCTTTGCAAAGCAACAGATAAAC...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp CAGCTCTTTACATTTAGGTGGGGCCATGAACACATACAGGTTGATGATCTGTTAACTACCCAACAATACTaGAGTATGCTAACCATAATC +
Preference number: 4 (lower is better)
Translates to: QLFTFRWGHEHIQVDDLLTTQQY*SMLTII
Trigger: GATTATGGTTAGCATACTGCAGTATTGTTGGGTAGT...TAACAGATCATCAACCTGTATGTGTTCATGGCCCCACCTAAATGTAAAGAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488005.5
CDS-3UTR CCA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTACACAGCACAAATGTTaGAGTCCTGGCAATACATGT +
Preference number: 4 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTTQHKC*SPGNTC
Trigger: ACATGTATTGCCAGGACTCCAACATTTGTGCTGTGT...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp AGTGGTAGAGAAAGAACTATTTCCAGAGGCTGCTGCTATCTAATATTAAGATATCTGGAACCAGCCTGTTaGAGAAGTCACTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SGRERTISRGCCYLILRYLEPAC*RSHCLK
Trigger: TTTCAGACAGTGACTTCTCCAACAGGCTGGTTCCAG...ATATCTTAATATTAGATAGCAGCAGCCTCTGGAAATAGTTCTTTCTCTACCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCAAACTACTTTGGAAAATaGCATGGCTTTGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPNYFGK*HGFVHF
Trigger: GAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTT...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp GAGCCAGGGATATCTGGTATCAGCATGTTTACTTCAATAGATGTGGGCACCATATGGATTAGCCTGTTCTaGATTAGTTCAAATTTACAG +
Preference number: 4 (lower is better)
Translates to: EPGISGISMFTSIDVGTIWISLF*ISSNLQ
Trigger: CTGTAAATTTGAACTAATCCAGAACAGGCTAATCCA...TATGGTGCCCACATCTATTGAAGTAAACATGCTGATACCAGATATCCCTGGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGAATAGGCCATTGCAATaGATTAGCCTGTTCTGGATT +
Preference number: 4 (lower is better)
Translates to: STSLTELNSLNLGANVSRNRPLQ*ISLFWI
Trigger: AATCCAGAACAGGCTAATCCATTGCAATGGCCTATT...CCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp CAGGTTTTGAAAGGTCACCTTATAAATGTCAGCAAATGTTGCCTAAGCTATCAACTCAGTTGTACTAAATaGGCCTGCTATGTAGTACCT +
Preference number: 4 (lower is better)
Translates to: QVLKGHLINVSKCCLSYQLSCTK*ACYVVP
Trigger: AGGTACTACATAGCAGGCTCATTTAGTACAACTGAG...TTGATAGCTTAGGCAACATTTGCTGACATTTATAAGGTGACCTTTCAAAACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248566.3
CDS-3UTR GCA 90 bp AGTGGTAGAGAAAGAACTATTTCCAGAGGCTGCTGCTATCTAATATTAAGATATTCCAAGTTTATCTGTTaGTTTGCAAAGGCCGGATGC +
Preference number: 4 (lower is better)
Translates to: SGRERTISRGCCYLILRYSKFIC*FAKAGC
Trigger: GCATCCGGCCTTTGCAAAGCAACAGATAAACTTGGA...ATATCTTAATATTAGATAGCAGCAGCCTCTGGAAATAGTTCTTTCTCTACCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCAACTATTTCCAGAGGCTaGTGCTATCTAATATTAAGA +
Preference number: 4 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPTISRG*CYLILR
Trigger: TCTTAATATTAGATAGCAGCAGCCTCTGGAAATAGT...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp TTTCTAACATCTAGTGATGCTGTTGAGAACTGCATCTTCAACAATTCCACAAGGGATGCTGTTGAGAACTaGATCTTCAACAATTCCACA +
Preference number: 4 (lower is better)
Translates to: FLTSSDAVENCIFNNSTRDAVEN*IFNNST
Trigger: TGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATC...CCTTGTGGAATTGTTGAAGATGCAGTTCTCAACAGCATCACTAGATGTTAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
CDS-3UTR CCA 90 bp CAGGTTTTGAAAGGTCACCTTATAAATGTCAGCAAATGTTGCCTAAGCTATCAACACCAACCCCTATTTTaGTATCTGCACTGCATTGTT +
Preference number: 4 (lower is better)
Translates to: QVLKGHLINVSKCCLSYQHQPLF*YLHCIV
Trigger: AACAATGCAGTGCAGATACCAAAATAGGGGTTGGTG...TTGATAGCTTAGGCAACATTTGCTGACATTTATAAGGTGACCTTTCAAAACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248566.3
CDS-3UTR CCA 90 bp GAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTAAGGCAAATGTTGGAGTCCTaGCAATACATGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ETTLENGMALSISFVLVRQMLES*QYMFFL
Trigger: AAGGAAGAACATGTATTGCCAGGACTCCAACATTTG...CCTTACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CCTAGAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTCAAATGTTGGAGTCCTaGCAATACATGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PRNYFGKWHGFVHFLCVSQMLES*QYMFFL
Trigger: AAGGAAGAACATGTATTGCCAGGACTCCAACATTTG...ACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTCTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp TGGGTCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCTCATATTTGTTAGGATaGGTAAGGTTGTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: WVNKPYRTKFFKLGGKCFSYLLG*VRLCCS
Trigger: ACTGCAGCACAACCTTACCCATCCTAACAAATATGA...GAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGACCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CCA 90 bp CCTAGAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTAATAGGCCATTGCAATaGATTAGCCTGTTCTGGATT +
Preference number: 4 (lower is better)
Translates to: PRNYFGKWHGFVHFLCVSNRPLQ*ISLFWI
Trigger: AATCCAGAACAGGCTAATCCATTGCAATGGCCTATT...ACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTCTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp CAGGTTTTGAAAGGTCACCTTATAAATGTCAGCAAATGTTGCCTAAGCTATCAAGAATTGGGAATCAGGTaGAATCTACTCCAGATCATT +
Preference number: 4 (lower is better)
Translates to: QVLKGHLINVSKCCLSYQELGIR*NLLQII
Trigger: AATGATCTGGAGTAGATTTCACCTGATTCCCAATTC...TTGATAGCTTAGGCAACATTTGCTGACATTTATAAGGTGACCTTTCAAAACCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248566.3
CDS-3UTR GCA 90 bp CCTTCAAGTAAGCCCCTGTTATGTAGCTACAGGAAGTATCATAATCTCTTACTAACTACCCAACAATACTaGAGTATGCTAACCATAATC +
Preference number: 4 (lower is better)
Translates to: PSSKPLLCSYRKYHNLLLTTQQY*SMLTII
Trigger: GATTATGGTTAGCATACTGCAGTATTGTTGGGTAGT...TAGTAAGAGATTATGATACTTCCTGTAGCTACATAACAGGGGCTTACTTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
CDS-3UTR CCA 90 bp AGTGGTAGAGAAAGAACTATTTCCAGAGGCTGCTGCTATCTAATATTAAGATATAAGAGGTTTAGTAGCTaGCTTTATGCCACATGGGTA +
Preference number: 4 (lower is better)
Translates to: SGRERTISRGCCYLILRYKRFSS*LYATWV
Trigger: TACCCATGTGGCATAAAGCCAGCTACTAAACCTCTT...ATATCTTAATATTAGATAGCAGCAGCCTCTGGAAATAGTTCTTTCTCTACCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR TCA 90 bp CAGGTTTTGAAAGGTCACCTTATAAATGTCAGCAAATGTTGCCTAAGCTATCAAACAGCTATCACTCTGTaGAAACTCAGTTGTACTAAA +
Preference number: 4 (lower is better)
Translates to: QVLKGHLINVSKCCLSYQTAITL*KLSCTK
Trigger: TTTAGTACAACTGAGTTTTCACAGAGTGATAGCTGT...TTGATAGCTTAGGCAACATTTGCTGACATTTATAAGGTGACCTTTCAAAACCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248566.3
CDS-3UTR CCA 90 bp GAAAGGTCACCTTATAAATGTCAGCAAATGTTGCCTAAGCTATCAAAATACAGATTCACAAAAGTGATGTaGCAACAGCTATCACTCTGT +
Preference number: 4 (lower is better)
Translates to: ERSPYKCQQMLPKLSKYRFTKVM*QQLSLC
Trigger: ACAGAGTGATAGCTGTTGCCACATCACTTTTGTGAA...TCTGTATTTTGATAGCTTAGGCAACATTTGCTGACATTTATAAGGTGACCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248566.3
CDS-3UTR TCA 90 bp GAAAGGTCACCTTATAAATGTCAGCAAATGTTGCCTAAGCTATCAAAATACAGAGTTGATAAAGTATCTTaGGCCCACTTCCTCAATTTT +
Preference number: 4 (lower is better)
Translates to: ERSPYKCQQMLPKLSKYRVDKVS*AHFLNF
Trigger: AAAATTGAGGAAGTGGGCTCAAGATACTTTATCAAC...TCTGTATTTTGATAGCTTAGGCAACATTTGCTGACATTTATAAGGTGACCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248566.3
3UTR CAA 72 bp AAGTATAACTTGTATTTCAGGCCACCAACCCCTATTTaGGTATCTGCACTGCATTGTTACATAAATTTTACA +
Preference number: 4 (lower is better)
Translates to: KYNLYFRPPTPI*VSALHCYINFT
Trigger: TGTAAAATTTATGTAACAATGCAGTGCAGATACCAAAATAGGGGTTGGTGGCCTGAAATACAAGTTATACTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248566.3
3UTR CAA 72 bp GAATCTATTGCATTTATGTTATCTTCAGGGAGGAATTaGGTAAGTTTTGTTCTTCTCATAACCCAGCACTAT +
Preference number: 4 (lower is better)
Translates to: ESIAFMLSSGRN*VSFVLLITQHY
Trigger: ATAGTGCTGGGTTATGAGAAGAACAAAACTTACCAAATTCCTCCCTGAAGATAACATAAATGCAATAGATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR GCA 90 bp GAAAGGTCACCTTATAAATGTCAGCAAATGTTGCCTAAGCTATCAAAATACAGACCCTATTTTGGTATCTaGACTGCATTGTTACATAAA +
Preference number: 4 (lower is better)
Translates to: ERSPYKCQQMLPKLSKYRPYFGI*TALLHK
Trigger: TTTATGTAACAATGCAGTGCAGATACCAAAATAGGG...TCTGTATTTTGATAGCTTAGGCAACATTTGCTGACATTTATAAGGTGACCTTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248566.3
CDS-3UTR GCA 90 bp AGTGGTAGAGAAAGAACTATTTCCAGAGGCTGCTGCTATCTAATATTAAGATATACTATTTCCAGAGGCTaGTGCTATCTAATATTAAGA +
Preference number: 4 (lower is better)
Translates to: SGRERTISRGCCYLILRYTISRG*CYLILR
Trigger: TCTTAATATTAGATAGCAGCAGCCTCTGGAAATAGT...ATATCTTAATATTAGATAGCAGCAGCCTCTGGAAATAGTTCTTTCTCTACCACT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp TCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCGTTGTCGCTCTGGAGTaGGGCATCTCCAAGTTTATC +
Preference number: 5 (lower is better)
Translates to: SRVLWPAELGFLCWVSSPVVALE*GISKFI
Trigger: GATAAACTTGGAGATGCCCAACTCCAGAGCGACAAC...GGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466986.5
CDS CCA 90 bp GCAGCCAGGCAGGCAAGAACAATCTTCACAGTGCACCAAGGATGGTaGGGGGCTCAGTGGAGCAGTGGAAAGAGTCAGGGACCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: AARQARTIFTVHQGW*GAQWSSGKSQGPCP
Trigger: TGGGCAAGGTCCCTGACTCTTTCCACTGCTCCACTGAGCCCCCCACCATCCTTGGTGCACTGTGAAGATTGTTCTTGCCTGCCTGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000493858.5
CDS-3UTR CAA 90 bp GGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGTCCTATTCGGCCATCTaGGCTCCTCCCCCAGGAGTT +
Preference number: 5 (lower is better)
Translates to: GPLSWASYAGSPPPFYAMSYSAI*APPPGV
Trigger: AACTCCTGGGGGAGGAGCCAAGATGGCCGAATAGGA...CATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR CAA 90 bp GTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATCCTATTCGGCCATCTaGGCTCCTCCCCCAGGAGTT +
Preference number: 5 (lower is better)
Translates to: VLWPAELGFLCWVSSPFLSYSAI*APPPGV
Trigger: AACTCCTGGGGGAGGAGCCAAGATGGCCGAATAGGA...TAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS-3UTR CAA 90 bp AGGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCCTCCAAGTTTATCTGTaGCTTTGCAAAGGCCGGATG +
Preference number: 5 (lower is better)
Translates to: RPDAYSHGSRVLWPAELGLQVYL*LCKGRM
Trigger: CATCCGGCCTTTGCAAAGCAACAGATAAACTTGGAG...GCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
CDS-3UTR CAA 90 bp GGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTAGTTTATCTGTTGCTTaGCAAAGGCCGGATGCTTAC +
Preference number: 5 (lower is better)
Translates to: GRMLTLMDPGSSGPLSWASLSVA*QRPDAY
Trigger: GTAAGCATCCGGCCTTTGCAAAGCAACAGATAAACT...AGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
CDS-3UTR CAA 90 bp GGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCAGAGCCTACCCATTTaGGGATCTTCCAGATCCAAG +
Preference number: 5 (lower is better)
Translates to: GPLSWASYAGSPPPFYAMQSLPI*GSSRSK
Trigger: CTTGGATCTGGAAGATCCCAAAATGGGTAGGCTCTG...CATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000617133.4
CDS-3UTR CAA 90 bp GTCCTCTGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTAACCCTCACACAGAGATaGACACGTTTCCCATATCCC +
Preference number: 5 (lower is better)
Translates to: VLWPAELGFLCWVSSPFLTLTQR*TRFPYP
Trigger: GGGATATGGGAAACGTGTCAATCTCTGTGTGAGGGT...TAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCAGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613919.4
CDS-3UTR CAA 90 bp TGCAGTATGCTAACCATAATCCTACCTTGCCCAGGCTGGACCTTCACCCAGGCTTCATCAGGAGTACAGTaGCCCTTCGGCAGGGAACTC +
Preference number: 5 (lower is better)
Translates to: CSMLTIILPCPGWTFTQASSGVQ*PFGREL
Trigger: GAGTTCCCTGCCGAAGGGCAACTGTACTCCTGATGA...AGCCTGGGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTTAGCATACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488005.5
CDS CCA 90 bp AGGTGGAGCTGCAGACCCAGGCTAACTCTGTTGTCGCTCTGGAGTTaGGCATCTCCAAGTTTATCTGTTGCTTTGCAAAGGCCGGATGCT +
Preference number: 5 (lower is better)
Translates to: RWSCRPRLTLLSLWS*ASPSLSVALQRPDA
Trigger: AGCATCCGGCCTTTGCAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGTTAGCCTGGGTCTGCAGCTCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000493858.5
CDS CCA 90 bp TCAGGGACCTGCAGACCCAGGCTAACTCTGTTGTCGCTCTGGAGTTaGGCATCTCCAAGTTTATCTGTTGCTTTGCAAAGGCCGGATGCT +
Preference number: 5 (lower is better)
Translates to: SGTCRPRLTLLSLWS*ASPSLSVALQRPDA
Trigger: AGCATCCGGCCTTTGCAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGTTAGCCTGGGTCTGCAGGTCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611360.4
ENST00000615352.4
CDS-3UTR CAA 90 bp TGCAGTATGCTAACCATAATCCTACCTTGCCCAGGCTGGACCTTCACCCAGGCTAACCATAATCCTACCTaGCCCAGGCTGGACCTTCAC +
Preference number: 5 (lower is better)
Translates to: CSMLTIILPCPGWTFTQANHNPT*PRLDLH
Trigger: GTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTT...AGCCTGGGTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTTAGCATACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413065.5
ENST00000488005.5
CDS-3UTR CAA 90 bp TGCAAAGGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCCATCTAGTGATGCTGTaGAGAACTGCATCTTCAACA +
Preference number: 5 (lower is better)
Translates to: CKGRMLTLMDPGSSGPLSHLVML*RTASST
Trigger: TGTTGAAGATGCAGTTCTCAACAGCATCACTAGATG...GCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
CDS-3UTR CAA 90 bp TGGCCCGCTGAGCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATCAGAGCCTACCCATTTaGGGATCTCAGATGGAAATG +
Preference number: 5 (lower is better)
Translates to: WPAELGFLCWVSSPFLCHQSLPI*GSQMEM
Trigger: CATTTCCATCTGAGATCCCAAAATGGGTAGGCTCTG...ATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGCTCAGCGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS GCA 90 bp CAGACTTCCATCTCTGCTATTGATATGCTGCTAGCAAGTTCTTTCTaGTGGGGCCAGATTGTAGAGGTCACCCGAATGGCAGCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: QTSISAIDMLLASSF*WGQIVEVTRMAARQ
Trigger: CTGCCTGGCTGCCATTCGGGTGACCTCTACAATCTGGCCCCAGCAGAAAGAACTTGCTAGCAGCATATCAATAGCAGAGATGGAAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356686.2
ENST00000493858.5
ENST00000611360.4
ENST00000615352.4
CDS GCA 90 bp CCTCGCCCAATGTGTCCTTCATCTGACTTGATGGTACCAAGCCACTaGAGGAGACACAGCCATTTAGGGAGACAGCTCAGGGCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: PRPMCPSSDLMVPSH*RRHSHLGRQLRAFS
Trigger: AGAAAAAGCCCTGAGCTGTCTCCCTAAATGGCTGTGTCTCCTGCAGTGGCTTGGTACCATCAAGTCAGATGAAGGACACATTGGGCGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS CCA 90 bp TTCTTGAGGTGGAGCTGCAGACCCAGGCTAACTCTGTTGTCGCTCTaGAGTTGGGCATCTCCAAGTTTATCTGTTGCTTTGCAAAGGCCG +
Preference number: 5 (lower is better)
Translates to: FLRWSCRPRLTLLSL*SWASPSLSVALQRP
Trigger: CGGCCTTTGCAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGTTAGCCTGGGTCTGCAGCTCCACCTCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000493858.5
CDS CCA 90 bp AAAGAGTCAGGGACCTGCAGACCCAGGCTAACTCTGTTGTCGCTCTaGAGTTGGGCATCTCCAAGTTTATCTGTTGCTTTGCAAAGGCCG +
Preference number: 5 (lower is better)
Translates to: KESGTCRPRLTLLSL*SWASPSLSVALQRP
Trigger: CGGCCTTTGCAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGTTAGCCTGGGTCTGCAGGTCCCTGACTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611360.4
ENST00000615352.4
CDS-3UTR CAA 90 bp GAGCCAGGGATATCTGGTATCAGCATGTTTACTTCAATAGATGTGGGCACCATACCCAGGCTAACTCTGTaGTCGCTCTGGAGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: EPGISGISMFTSIDVGTIPRLTL*SLWSWA
Trigger: TGCCCAACTCCAGAGCGACAACAGAGTTAGCCTGGG...TATGGTGCCCACATCTATTGAAGTAAACATGCTGATACCAGATATCCCTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp CTGCTCCCATGTTCTTCCACATTGTGTCCTTTCATCCCCACAAACACCCTGTGTTCCGCTGCACAAGACTaGAAACAATCCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LLPCSSTLCPFIPTNTLCSAAQD*KQSLSF
Trigger: GAAGGAGAGGGATTGTTTCAAGTCTTGTGCAGCGGA...ACACAGGGTGTTTGTGGGGATGAAAGGACACAATGTGGAAGAACATGGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR CAA 90 bp GATGCTTACTCTCATGGATCCAGGGTCCTCTGGCCCGCTGAGCTGGGCTTCTTAAACACAGCACAAATGTaGGAGTCAACATCTAGTGAT +
Preference number: 5 (lower is better)
Translates to: DAYSHGSRVLWPAELGFLNTAQM*ESTSSD
Trigger: ATCACTAGATGTTGACTCCAACATTTGTGCTGTGTT...TAAGAAGCCCAGCTCAGCGGGCCAGAGGACCCTGGATCCATGAGAGTAAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000618105.4
CDS-3UTR CAA 90 bp GTTGGGGGCAGGATGGGAAGGAAGTATGTTCCAATAAAAGAGGACAGCTTATATCCTCAGGTAGACAAGTaGGGTGTTGGGGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: VGGRMGRKYVPIKEDSLYPQVDK*GVGGRM
Trigger: CATCCTGCCCCCAACACCCAACTTGTCTACCTGAGG...ATATAAGCTGTCCTCTTTTATTGGAACATACTTCCTTCCCATCCTGCCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000623693.3
CDS TCA 90 bp AGGCATCATCAATCCACTGAGGGCCTTCTCAGCTGTAACTTTACATaGCCCATGCCGGATAGATGGATGGATGGATTAGAGGCAGTTGAG +
Preference number: 5 (lower is better)
Translates to: RHHQSTEGLLSCNFT*PMPDRWMDGLEAVE
Trigger: CTCAACTGCCTCTAATCCATCCATCCATCTATCCGGCATGGGTCATGTAAAGTTACAGCTGAGAAGGCCCTCAGTGGATTGATGATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616956.1
CDS CCA 90 bp TCCAGTTCACTGTATCCAGCCCTGAGTCACAGGGTGCCAGGCATTTaGCTAAACATCATTTCCAGGTATGTCTATGAGGGTGTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: SSSLYPALSHRVPGI*LNIISRYVYEGVSG
Trigger: TCCAGAAACACCCTCATAGACATACCTGGAAATGATGTTTAGCCAAATGCCTGGCACCCTGTGACTCAGGGCTGGATACAGTGAACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616956.1
CDS-3UTR CAA 90 bp CAAACACAGCACAAATGTTGGAGTCAACATCTAGTGATGCTGTTGAGAACTGCACCCAGGCTAACTCTGTaGTCGCTCTGGAGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: QTQHKCWSQHLVMLLRTAPRLTL*SLWSWA
Trigger: TGCCCAACTCCAGAGCGACAACAGAGTTAGCCTGGG...TGCAGTTCTCAACAGCATCACTAGATGTTGACTCCAACATTTGTGCTGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
CDS-3UTR CAA 90 bp TGGGGCCATGAACACATACAGGTTGATGATCTGTTAACAGCAGAGGAAAGCACTAACCATAATCCTACCTaGCCCAGGCTGGACCTTCAC +
Preference number: 5 (lower is better)
Translates to: WGHEHIQVDDLLTAEESTNHNPT*PRLDLH
Trigger: GTGAAGGTCCAGCCTGGGCAAGGTAGGATTATGGTT...AGTGCTTTCCTCTGCTGTTAACAGATCATCAACCTGTATGTGTTCATGGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488005.5
CDS-3UTR CAA 90 bp GCTGGGCTTCTTATGCTGGGTCTCCTCCCCCTTTTTATGCCATGCTTTCTTCCCCATCTAGTGATGCTGTaGAGAACTGCATCTTCAACA +
Preference number: 5 (lower is better)
Translates to: AGLLMLGLLPLFMPCFLPHLVML*RTASST
Trigger: TGTTGAAGATGCAGTTCTCAACAGCATCACTAGATG...GGGAAGAAAGCATGGCATAAAAAGGGGGAGGAGACCCAGCATAAGAAGCCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000466986.5
ENST00000613919.4
ENST00000617133.4
ENST00000618105.4
ENST00000619259.4
CDS GCA 90 bp CTGGACTCTGGGAATGGAGGTGGGCATCTTCTCAGTCTTGCAGAATaGCATCTTTTATGGGTAGAGATGATGCTGTGTCTACGTATGGTT +
Preference number: 5 (lower is better)
Translates to: LDSGNGGGHLLSLAE*HLLWVEMMLCLRMV
Trigger: AACCATACGTAGACACAGCATCATCTCTACCCATAAAAGATGGCATTCTGCAAGACTGAGAAGATGCCCACCTCCATTCCCAGAGTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606019.5
ENST00000618028.4
CDS-3UTR CAA 90 bp GAGCCAGGGATATCTGGTATCAGCATGTTTACTTCAATAGATGTGGGCACCATAGTTCTACCATGTGCCTaGAAGACAGAGAGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: EPGISGISMFTSIDVGTIVLPCA*KTESQG
Trigger: TCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAAC...TATGGTGCCCACATCTATTGAAGTAAACATGCTGATACCAGATATCCCTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp CCGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCCTTATACCATCGGTGTaGGAGGAAGGATTACGTTGT +
Preference number: 5 (lower is better)
Translates to: PVMEAYTIGVGGRITLFSLIPSV*EEGLRC
Trigger: ACAACGTAATCCTTCCTCCAACACCGATGGTATAAG...GGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp TCTGTTGCTTTGCAAAGGCCGGATGCTTACTCTCATGGATCCAGGGTCCTCTGGAACACAGCACAAATGTaGGAGTCAACATCTAGTGAT +
Preference number: 5 (lower is better)
Translates to: SVALQRPDAYSHGSRVLWNTAQM*ESTSSD
Trigger: ATCACTAGATGTTGACTCCAACATTTGTGCTGTGTT...CCAGAGGACCCTGGATCCATGAGAGTAAGCATCCGGCCTTTGCAAAGCAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466986.5
CDS GCA 90 bp CTGGACTCTGGGAATGGAGGTGGGCATCTTCTCAGTCTTGCAGAATaGCATCTTTTATGGGTAGAGATGATGCTGTGTCTTTGCATTACA +
Preference number: 5 (lower is better)
Translates to: LDSGNGGGHLLSLAE*HLLWVEMMLCLCIT
Trigger: TGTAATGCAAAGACACAGCATCATCTCTACCCATAAAAGATGGCATTCTGCAAGACTGAGAAGATGCCCACCTCCATTCCCAGAGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622838.4
CDS GCA 90 bp CTGGACTCTGGGAATGGAGGTGGGCATCTTCTCAGTCTTGCAGAATaGCATCTTTTATGGGTAGAGATGATGCTGTGTGTATGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: LDSGNGGGHLLSLAE*HLLWVEMMLCVWFL
Trigger: AAGAAACCATACACACAGCATCATCTCTACCCATAAAAGATGGCATTCTGCAAGACTGAGAAGATGCCCACCTCCATTCCCAGAGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622128.1
CDS-3UTR CAA 90 bp GAGCCAGGGATATCTGGTATCAGCATGTTTACTTCAATAGATGTGGGCACCATAGTTGTCGCTCTGGAGTaGGGCATCTCCAAGTTTATC +
Preference number: 5 (lower is better)
Translates to: EPGISGISMFTSIDVGTIVVALE*GISKFI
Trigger: GATAAACTTGGAGATGCCCAACTCCAGAGCGACAAC...TATGGTGCCCACATCTATTGAAGTAAACATGCTGATACCAGATATCCCTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp TGGGTCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCCAGGCTAACTCTGTaGTCGCTCTGGAGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: WVNKPYRTKFFKLGGKCFPRLTL*SLWSWA
Trigger: TGCCCAACTCCAGAGCGACAACAGAGTTAGCCTGGG...GAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTTTAGGATGGGTAAGGTaGTGCTGCAGTAGCAACAAA +
Preference number: 5 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPLGWVR*CCSSNK
Trigger: TTTGTTGCTACTGCAGCACAACCTTACCCATCCTAA...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp GTTTCTCTTGAAGGAGACCAGCTGATGCATGTCCATGGATGTCTCTTCTGGCTGCATCTAGTGATGCTGTaGAGAACTGCATCTTCAACA +
Preference number: 5 (lower is better)
Translates to: VSLEGDQLMHVHGCLFWLHLVML*RTASST
Trigger: TGTTGAAGATGCAGTTCTCAACAGCATCACTAGATG...CAGCCAGAAGAGACATCCATGGACATGCATCAGCTGGTCTCCTTCAAGAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613919.4
CDS-3UTR CAA 90 bp CTGACCACTTGGTACAGGAATTCCTGTCAGATGGGTCAACAAGCCTTACAGAACTCACTGTCTGAAACATaGTCAGTTGTGATGACAGAG +
Preference number: 5 (lower is better)
Translates to: LTTWYRNSCQMGQQALQNSLSET*SVVMTE
Trigger: CTCTGTCATCACAACTGACAATGTTTCAGACAGTGA...GTTCTGTAAGGCTTGTTGACCCATCTGACAGGAATTCCTGTACCAAGTGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp GCCGGTCCAATCCTTTGGACTTTAAGACAGCTAATCTTGACCAACACTGAAGACAGCCGGTCCAATCCTTaGGACTTTAAGACAGCTAAT +
Preference number: 5 (lower is better)
Translates to: AGPILWTLRQLILTNTEDSRSNP*DFKTAN
Trigger: ATTAGCTGTCTTAAAGTCCAAAGGATTGGACCGGCT...GTCTTCAGTGTTGGTCAAGATTAGCTGTCTTAAAGTCCAAAGGATTGGACCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR CAA 90 bp GTTTCTCTTGAAGGAGACCAGCTGATGCATGTCCATGGATGTCTCTTCTGGCTGAACACAGCACAAATGTaGGAGTCAACATCTAGTGAT +
Preference number: 5 (lower is better)
Translates to: VSLEGDQLMHVHGCLFWLNTAQM*ESTSSD
Trigger: ATCACTAGATGTTGACTCCAACATTTGTGCTGTGTT...CAGCCAGAAGAGACATCCATGGACATGCATCAGCTGGTCTCCTTCAAGAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613919.4
CDS GCA 90 bp CTAAATATCTCATCAGTGAGAACATGGCCGTTTTCTTTTGGATGGTaGCCTAATCTTCCCGAAGTCAGCTTGCTAGTAAGCGTTGGAACA +
Preference number: 5 (lower is better)
Translates to: LNISSVRTWPFSFGW*PNLPEVSLLVSVGT
Trigger: TGTTCCAACGCTTACTAGCAAGCTGACTTCGGGAAGATTAGGGCACCATCCAAAAGAAAACGGCCATGTTCTCACTGATGAGATATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618028.4
CDS CCA 90 bp ATCCTAAATATCTCATCAGTGAGAACATGGCCGTTTTCTTTTGGATaGTGCCCTAATCTTCCCGAAGTCAGCTTGCTAGTAAGCGTTGGA +
Preference number: 5 (lower is better)
Translates to: ILNISSVRTWPFSFG*CPNLPEVSLLVSVG
Trigger: TCCAACGCTTACTAGCAAGCTGACTTCGGGAAGATTAGGGCACCATCCAAAAGAAAACGGCCATGTTCTCACTGATGAGATATTTAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618028.4
CDS-3UTR CAA 90 bp GAGCCAGGGATATCTGGTATCAGCATGTTTACTTCAATAGATGTGGGCACCATAAACACAGCACAAATGTaGGAGTCCTGGCAATACATG +
Preference number: 5 (lower is better)
Translates to: EPGISGISMFTSIDVGTINTAQM*ESWQYM
Trigger: CATGTATTGCCAGGACTCCAACATTTGTGCTGTGTT...TATGGTGCCCACATCTATTGAAGTAAACATGCTGATACCAGATATCCCTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp GAGAACTGCATCTTCAACAATTCCACAAGGTCAAACAGAGCCTACCCATTTTGGAACACAGCACAAATGTaGGAGTCCTGGCAATACATG +
Preference number: 5 (lower is better)
Translates to: ENCIFNNSTRSNRAYPFWNTAQM*ESWQYM
Trigger: CATGTATTGCCAGGACTCCAACATTTGTGCTGTGTT...CCAAAATGGGTAGGCTCTGTTTGACCTTGTGGAATTGTTGAAGATGCAGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617133.4
CDS-3UTR CAA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCACTCCAAGTTTATCTGTaGCTTTGCAAAGGCCGGATG +
Preference number: 5 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPLQVYL*LCKGRM
Trigger: CATCCGGCCTTTGCAAAGCAACAGATAAACTTGGAG...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp GAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTAAGGGTTCTACCATGTGCCTaGAAGACAGAGAGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: ETTLENGMALSISFVLVRVLPCA*KTESQG
Trigger: TCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAAC...CCTTACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp TCACCCATCCAAATGTATACATCACATTCTCCGGGAGAAACTACTGCTAACATTTCTGGAACCAGCCTGTaGGAGAAGTCACTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: SPIQMYTSHSPGETTANISGTSL*EKSLSE
Trigger: TTCAGACAGTGACTTCTCCAACAGGCTGGTTCCAGA...AATGTTAGCAGTAGTTTCTCCCGGAGAATGTGATGTATACATTTGGATGGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp GAGCCAGGGATATCTGGTATCAGCATGTTTACTTCAATAGATGTGGGCACCATATTAGGATGGGTAAGGTaGTGCTGCAGTAGCAACAAA +
Preference number: 5 (lower is better)
Translates to: EPGISGISMFTSIDVGTILGWVR*CCSSNK
Trigger: TTTGTTGCTACTGCAGCACAACCTTACCCATCCTAA...TATGGTGCCCACATCTATTGAAGTAAACATGCTGATACCAGATATCCCTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp TATAGTTCTACCATGTGCCTTGAAGACAGAGAGCCAGGGATATCTGGTATCAGCGTCCTAGAAACTACTTaGGAAAATGGCATGGCTTTG +
Preference number: 5 (lower is better)
Translates to: YSSTMCLEDREPGISGISVLETT*ENGMAL
Trigger: CAAAGCCATGCCATTTTCCAAAGTAGTTTCTAGGAC...GCTGATACCAGATATCCCTGGCTCTCTGTCTTCAAGGCACATGGTAGAACTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp CCACAAGGTCAAACAGAGCCTACCCATTTTGGGATCTCAGATGGAAATGCAGAACATCTAGTGATGCTGTaGAGAACTGCATCTTCAACA +
Preference number: 5 (lower is better)
Translates to: PQGQTEPTHFGISDGNAEHLVML*RTASST
Trigger: TGTTGAAGATGCAGTTCTCAACAGCATCACTAGATG...TTCTGCATTTCCATCTGAGATCCCAAAATGGGTAGGCTCTGTTTGACCTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613919.4
ENST00000618105.4
CDS CCA 90 bp AATGGAGGTGGGCATCTTCTCAGTCTTGCAGAATGCCATCTTTTATaGGTAGAGATGATGCTGTGTCTACGTATGGTTTCTTTGAGACAT +
Preference number: 5 (lower is better)
Translates to: NGGGHLLSLAECHLL*VEMMLCLRMVSLRH
Trigger: ATGTCTCAAAGAAACCATACGTAGACACAGCATCATCTCTACCCATAAAAGATGGCATTCTGCAAGACTGAGAAGATGCCCACCTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606019.5
ENST00000618028.4
CDS CCA 90 bp AATGGAGGTGGGCATCTTCTCAGTCTTGCAGAATGCCATCTTTTATaGGTAGAGATGATGCTGTGTCTTTGCATTACAGATGAGGAAACT +
Preference number: 5 (lower is better)
Translates to: NGGGHLLSLAECHLL*VEMMLCLCITDEET
Trigger: AGTTTCCTCATCTGTAATGCAAAGACACAGCATCATCTCTACCCATAAAAGATGGCATTCTGCAAGACTGAGAAGATGCCCACCTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622838.4
CDS-3UTR CAA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCAAACACAGCACAAATGTaGGAGTCCTGGCAATACATG +
Preference number: 5 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPNTAQM*ESWQYM
Trigger: CATGTATTGCCAGGACTCCAACATTTGTGCTGTGTT...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCAAGTTTATCTGTTGCTTaGCAAAGGCCGGATGCTTAC +
Preference number: 5 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPSLSVA*QRPDAY
Trigger: GTAAGCATCCGGCCTTTGCAAAGCAACAGATAAACT...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp TCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGCTCCAAGTTTATCTGTaGCTTTGCAAAGGCCGGATG +
Preference number: 5 (lower is better)
Translates to: STSLTELNSLNLGANVSRLQVYL*LCKGRM
Trigger: CATCCGGCCTTTGCAAAGCAACAGATAAACTTGGAG...CCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp CCTAGAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTGTTGTCGCTCTGGAGTaGGGCATCTCCAAGTTTATC +
Preference number: 5 (lower is better)
Translates to: PRNYFGKWHGFVHFLCVSVVALE*GISKFI
Trigger: GATAAACTTGGAGATGCCCAACTCCAGAGCGACAAC...ACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp GAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTAAGGTTCATCTGTCTGAACTaGTCATGTGACCCACCCAGC +
Preference number: 5 (lower is better)
Translates to: ETTLENGMALSISFVLVRFICLN*SCDPPS
Trigger: GCTGGGTGGGTCACATGACAAGTTCAGACAGATGAA...CCTTACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp CCTAGAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTTTCATCTGTCTGAACTaGTCATGTGACCCACCCAGC +
Preference number: 5 (lower is better)
Translates to: PRNYFGKWHGFVHFLCVSFICLN*SCDPPS
Trigger: GCTGGGTGGGTCACATGACAAGTTCAGACAGATGAA...ACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp GAGCCAGGGATATCTGGTATCAGCATGTTTACTTCAATAGATGTGGGCACCATATCACTGTCTGAAACATaGTCAGTTGTGATGACAGAG +
Preference number: 5 (lower is better)
Translates to: EPGISGISMFTSIDVGTISLSET*SVVMTE
Trigger: CTCTGTCATCACAACTGACAATGTTTCAGACAGTGA...TATGGTGCCCACATCTATTGAAGTAAACATGCTGATACCAGATATCCCTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp CCTAGAAACTACTTTGGAAAATGGCATGGCTTTGTCCATTTCCTTTGTGTTAGTTCTGGAACCAGCCTGTaGGAGAAGTCACTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: PRNYFGKWHGFVHFLCVSSGTSL*EKSLSE
Trigger: TTCAGACAGTGACTTCTCCAACAGGCTGGTTCCAGA...ACTAACACAAAGGAAATGGACAAAGCCATGCCATTTTCCAAAGTAGTTTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp CGGTCATGGAGGCTTATACCATCGGTGTTGGAGGAAGGATTACGTTGTTTTCCTGGATTCTTGGCATTATaGAGAAATGACACTTTGTTG +
Preference number: 5 (lower is better)
Translates to: RSWRLIPSVLEEGLRCFPGFLAL*RNDTLL
Trigger: CAACAAAGTGTCATTTCTCAATAATGCCAAGAATCC...AGGAAAACAACGTAATCCTTCCTCCAACACCGATGGTATAAGCCTCCATGACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp TCCCATTGTCATCTGGTCCCAGTGTTTACTTGTCAAGAAGAGTCTGATTTAATTTGTCCTTCATCTGACTaGATGGTACCAAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: SHCHLVPVFTCQEESDLICPSSD*MVPSHC
Trigger: GCAGTGGCTTGGTACCATCAAGTCAGATGAAGGACA...AATTAAATCAGACTCTTCTTGACAAGTAAACACTGGGACCAGATGACAATGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR CAA 90 bp ATGGAACACATATGTGTATGTAGACAGCAACAAGACTTCTGCAGATCACTTCTGCCATGTTCTTCCACATaGTGTCCTTTCATCCCCACA +
Preference number: 5 (lower is better)
Translates to: MEHICVCRQQQDFCRSLLPCSST*CPFIPT
Trigger: TGTGGGGATGAAAGGACACAATGTGGAAGAACATGG...CAGAAGTGATCTGCAGAAGTCTTGTTGCTGTCTACATACACATATGTGTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS TCA 90 bp CAGGGTGCCAGGCATTTGGCTAAACATCATTTCCAGGTATGTCTATaGGGGTGTTTCTGGATAGAATTAGCATTTGAATTGCTGGATTCA +
Preference number: 5 (lower is better)
Translates to: QGARHLAKHHFQVCL*GCFWIELAFELLDS
Trigger: TGAATCCAGCAATTCAAATGCTAATTCTATCCAGAAACACCCTCATAGACATACCTGGAAATGATGTTTAGCCAAATGCCTGGCACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616956.1
CDS-3UTR CAA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTTCACTGACTGACCACTaGGTACAGGAATTCCTGTCA +
Preference number: 5 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTSLTDH*VQEFLS
Trigger: TGACAGGAATTCCTGTACCAAGTGGTCAGTCAGTGA...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp CTTCCACATTGTGTCCTTTCATCCCCACAAACACCCTGTGTAATAAATATTATTTGTGCCAGTATCCCATaGTCATCTGGTCCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: LPHCVLSSPQTPCVINIICASIP*SSGPSV
Trigger: AACACTGGGACCAGATGACAATGGGATACTGGCACA...AATAATATTTATTACACAGGGTGTTTGTGGGGATGAAAGGACACAATGTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS TCA 90 bp TTTCCAGGTATGTCTATGAGGGTGTTTCTGGATAGAATTAGCATTTaGATTGCTGGATTCAGTAAAGAAGACTGCCCTCCCCAATATGAG +
Preference number: 5 (lower is better)
Translates to: FPGMSMRVFLDRISI*IAGFSKEDCPPQYE
Trigger: CTCATATTGGGGAGGGCAGTCTTCTTTACTGAATCCAGCAATTCAAATGCTAATTCTATCCAGAAACACCCTCATAGACATACCTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616956.1
CDS-3UTR CAA 90 bp CAGGTTTTGAAAGGTCACCTTATAAATGTCAGCAAATGTTGCCTAAGCTATCAACCACCAACCCCTATTTaGGTATCTGCACTGCATTGT +
Preference number: 5 (lower is better)
Translates to: QVLKGHLINVSKCCLSYQPPTPI*VSALHC
Trigger: ACAATGCAGTGCAGATACCAAAATAGGGGTTGGTGG...TTGATAGCTTAGGCAACATTTGCTGACATTTATAAGGTGACCTTTCAAAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248566.3
CDS-3UTR CAA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTAGTTTATCTGTTGCTTaGCAAAGGCCGGATGCTTAC +
Preference number: 5 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTSLSVA*QRPDAY
Trigger: GTAAGCATCCGGCCTTTGCAAAGCAACAGATAAACT...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp CTAAATTCTTTAAACTTGGGGGCAAATGTTTCCCGGTCATGGAGGCTTATACCAGAAAATGGCATGGCTTaGTCCATTTCCTTTGTGTTA +
Preference number: 5 (lower is better)
Translates to: LNSLNLGANVSRSWRLIPENGMA*SISFVL
Trigger: TAACACAAAGGAAATGGACAAAGCCATGCCATTTTC...TGGTATAAGCCTCCATGACCGGGAAACATTTGCCCCCAAGTTTAAAGAATTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTAGGATGAATAGGCCATaGCAATGGATTAGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTRMNRP*QWISLF
Trigger: GAACAGGCTAATCCATTGCAATGGCCTATTCATCCT...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp TGGGTCAACAAGCCTTACAGAACTAAATTCTTTAAACTTGGGGGCAAATGTTTCCTTATACCATCGGTGTaGGAGGAAGGATTACGTTGT +
Preference number: 5 (lower is better)
Translates to: WVNKPYRTKFFKLGGKCFLIPSV*EEGLRC
Trigger: ACAACGTAATCCTTCCTCCAACACCGATGGTATAAG...GAAACATTTGCCCCCAAGTTTAAAGAATTTAGTTCTGTAAGGCTTGTTGACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp ACTTTAAGACAGCTAATCTTGACCAACACTGAAGACAGCCAACTTGGTGCTATAGTGACTTTAAATCCATaGTTCTTCCCACTCTCCATC +
Preference number: 5 (lower is better)
Translates to: TLRQLILTNTEDSQLGAIVTLNP*FFPLSI
Trigger: GATGGAGAGTGGGAAGAACAATGGATTTAAAGTCAC...TATAGCACCAAGTTGGCTGTCTTCAGTGTTGGTCAAGATTAGCTGTCTTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS-3UTR CAA 90 bp ACTTTAAGACAGCTAATCTTGACCAACACTGAAGACAGCCAACTTGGTGCTATATTAAGACAGCTAATCTaGACCAACACTGAAGACAGC +
Preference number: 5 (lower is better)
Translates to: TLRQLILTNTEDSQLGAILRQLI*TNTEDS
Trigger: GCTGTCTTCAGTGTTGGTCAAGATTAGCTGTCTTAA...TATAGCACCAAGTTGGCTGTCTTCAGTGTTGGTCAAGATTAGCTGTCTTAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS CCA 90 bp CAGCCTTCTAGTAAAGGCCTTTGGATTAAATTCTCTGAAGGAAACTaGCCTCACCTAATAAACTCACCAGAACATAAAAGGACATGGAAA +
Preference number: 5 (lower is better)
Translates to: QPSSKGLWIKFSEGN*PHLINSPEHKRTWK
Trigger: TTTCCATGTCCTTTTATGTTCTGGTGAGTTTATTAGGTGAGGCCAGTTTCCTTCAGAGAATTTAATCCAAAGGCCTTTACTAGAAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606019.5
CDS-3UTR CAA 90 bp AGTGGTAGAGAAAGAACTATTTCCAGAGGCTGCTGCTATCTAATATTAAGATATTCACTGACTGACCACTaGGTACAGGAATTCCTGTCA +
Preference number: 5 (lower is better)
Translates to: SGRERTISRGCCYLILRYSLTDH*VQEFLS
Trigger: TGACAGGAATTCCTGTACCAAGTGGTCAGTCAGTGA...ATATCTTAATATTAGATAGCAGCAGCCTCTGGAAATAGTTCTTTCTCTACCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTGAAAATGGCATGGCTTaGTCCATTTCCTTTGTGTTA +
Preference number: 5 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTENGMA*SISFVL
Trigger: TAACACAAAGGAAATGGACAAAGCCATGCCATTTTC...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp AGTGGTAGAGAAAGAACTATTTCCAGAGGCTGCTGCTATCTAATATTAAGATATAGGATGAATAGGCCATaGCAATGGATTAGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: SGRERTISRGCCYLILRYRMNRP*QWISLF
Trigger: GAACAGGCTAATCCATTGCAATGGCCTATTCATCCT...ATATCTTAATATTAGATAGCAGCAGCCTCTGGAAATAGTTCTTTCTCTACCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTTCTTCAGGGAGGAATTaGGTAAGTTTTGTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTSSGRN*VSFVLL
Trigger: GAGAAGAACAAAACTTACCAAATTCCTCCCTGAAGA...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp CTGATGTATTTGTTTCTAACATCTAGTGATGCTGTTGAGAACTGCATCTTCAACCATCTAGTGATGCTGTaGAGAACTGCATCTTCAACA +
Preference number: 5 (lower is better)
Translates to: LMYLFLTSSDAVENCIFNHLVML*RTASST
Trigger: TGTTGAAGATGCAGTTCTCAACAGCATCACTAGATG...GTTGAAGATGCAGTTCTCAACAGCATCACTAGATGTTAGAAACAAATACATCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617133.4
ENST00000619259.4
CDS-3UTR CAA 90 bp AGTGGTAGAGAAAGAACTATTTCCAGAGGCTGCTGCTATCTAATATTAAGATATGTCCTAGAAACTACTTaGGAAAATGGCATGGCTTTG +
Preference number: 5 (lower is better)
Translates to: SGRERTISRGCCYLILRYVLETT*ENGMAL
Trigger: CAAAGCCATGCCATTTTCCAAAGTAGTTTCTAGGAC...ATATCTTAATATTAGATAGCAGCAGCCTCTGGAAATAGTTCTTTCTCTACCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp AGCAACAAACCATCAAACCTCAGATGCTTAACCCAACAAAAGCATTTTCTCACTGGATTCTTGGCATTATaGAGAAATGACACTTTGTTG +
Preference number: 5 (lower is better)
Translates to: SNKPSNLRCLTQQKHFLTGFLAL*RNDTLL
Trigger: CAACAAAGTGTCATTTCTCAATAATGCCAAGAATCC...AGTGAGAAAATGCTTTTGTTGGGTTAAGCATCTGAGGTTTGATGGTTTGTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS-3UTR CAA 90 bp CAGGTTTTGAAAGGTCACCTTATAAATGTCAGCAAATGTTGCCTAAGCTATCAAATTTTGAAGTATAACTaGTATTTCAGGCCACCAACC +
Preference number: 5 (lower is better)
Translates to: QVLKGHLINVSKCCLSYQILKYN*YFRPPT
Trigger: GGTTGGTGGCCTGAAATACAAGTTATACTTCAAAAT...TTGATAGCTTAGGCAACATTTGCTGACATTTATAAGGTGACCTTTCAAAACCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248566.3
CDS-3UTR CAA 90 bp AGTGGTAGAGAAAGAACTATTTCCAGAGGCTGCTGCTATCTAATATTAAGATATTCTTCAGGGAGGAATTaGGTAAGTTTTGTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: SGRERTISRGCCYLILRYSSGRN*VSFVLL
Trigger: GAGAAGAACAAAACTTACCAAATTCCTCCCTGAAGA...ATATCTTAATATTAGATAGCAGCAGCCTCTGGAAATAGTTCTTTCTCTACCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000615352.4
CDS TCA 72 bp TTCGGCCATCTTGGCTCCTCCCCCAGGAGTTTCTCTTaGAGGAGACCAGCTGATGCATGTCCATGGCGTAAC +
Preference number: 6 (lower is better)
Translates to: FGHLGSSPRSFS*RRPADACPWRN
Trigger: GTTACGCCATGGACATGCATCAGCTGGTCTCCTTCAAGAGAAACTCCTGGGGGAGGAGCCAAGATGGCCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618105.4
CDS CAA 90 bp GAGGTGGAGCTGCAGACCCAGGCTAACTCTGTTGTCGCTCTGGAGTaGGGCATCTCCAAGTTTATCTGTTGCTTTGCAAAGGCCGGATGC +
Preference number: 6 (lower is better)
Translates to: EVELQTQANSVVALE*GISKFICCFAKAGC
Trigger: GCATCCGGCCTTTGCAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGTTAGCCTGGGTCTGCAGCTCCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000493858.5
CDS CAA 90 bp GTCAGGGACCTGCAGACCCAGGCTAACTCTGTTGTCGCTCTGGAGTaGGGCATCTCCAAGTTTATCTGTTGCTTTGCAAAGGCCGGATGC +
Preference number: 6 (lower is better)
Translates to: VRDLQTQANSVVALE*GISKFICCFAKAGC
Trigger: GCATCCGGCCTTTGCAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGTTAGCCTGGGTCTGCAGGTCCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611360.4
ENST00000615352.4
CDS CCA 72 bp GGGACCTGCAGACCCAGGCTAACTCTGTTGTCGCTCTaGAGTTGGGCATCTCCAAGTTTATCTGTTGCTTTG +
Preference number: 6 (lower is better)
Translates to: GTCRPRLTLLSL*SWASPSLSVAL
Trigger: CAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGTTAGCCTGGGTCTGCAGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611360.4
ENST00000615352.4
CDS CAA 90 bp TGGCCGTTTTCTTTTGGATGGTGCCCTAATCTTCCCGAAGTCAGCTaGCTAGTAAGCGTTGGAACAAGGCAGGAATGCAAGCCATCCTCC +
Preference number: 6 (lower is better)
Translates to: WPFSFGWCPNLPEVS*LVSVGTRQECKPSS
Trigger: GGAGGATGGCTTGCATTCCTGCCTTGTTCCAACGCTTACTAGCAAGCTGACTTCGGGAAGATTAGGGCACCATCCAAAAGAAAACGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618028.4
CDS GCA 72 bp ATGTGTCCTTCATCTGACTTGATGGTACCAAGCCACTaGAGGAGACACAGCCATTTAGGGAGACAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: MCPSSDLMVPSH*RRHSHLGRQLR
Trigger: CCTGAGCTGTCTCCCTAAATGGCTGTGTCTCCTGCAGTGGCTTGGTACCATCAAGTCAGATGAAGGACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444799.5
CDS CCA 72 bp TGGAGCTGCAGACCCAGGCTAACTCTGTTGTCGCTCTaGAGTTGGGCATCTCCAAGTTTATCTGTTGCTTTG +
Preference number: 6 (lower is better)
Translates to: WSCRPRLTLLSL*SWASPSLSVAL
Trigger: CAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGTTAGCCTGGGTCTGCAGCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356686.2
ENST00000493858.5
CDS TCA 72 bp CAGCTTTCTACGACACAGCTCTATGTTGGCGGATTATaGAGCAACTTGAAAGCGAGCTTCGGCAGGGAACTC +
Preference number: 6 (lower is better)
Translates to: QLSTTQLYVGGL*SNLKASFGREL
Trigger: GAGTTCCCTGCCGAAGCTCGCTTTCAAGTTGCTTCATAATCCGCCAACATAGAGCTGTGTCGTAGAAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476463.1
CDS CCA 72 bp CTGTATCCAGCCCTGAGTCACAGGGTGCCAGGCATTTaGCTAAACATCATTTCCAGGTATGTCTATGAGGGT +
Preference number: 6 (lower is better)
Translates to: LYPALSHRVPGI*LNIISRYVYEG
Trigger: ACCCTCATAGACATACCTGGAAATGATGTTTAGCCAAATGCCTGGCACCCTGTGACTCAGGGCTGGATACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616956.1
CDS CAA 72 bp CTGCAGACCCAGGCTAACTCTGTTGTCGCTCTGGAGTaGGGCATCTCCAAGTTTATCTGTTGCTTTGCAAAG +
Preference number: 6 (lower is better)
Translates to: LQTQANSVVALE*GISKFICCFAK
Trigger: CTTTGCAAAGCAACAGATAAACTTGGAGATGCCCAACTCCAGAGCGACAACAGAGTTAGCCTGGGTCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356686.2
ENST00000493858.5
ENST00000611360.4
ENST00000615352.4
CDS TCA 72 bp CAATCCACTGAGGGCCTTCTCAGCTGTAACTTTACATaGCCCATGCCGGATAGATGGATGGATGGATTAGAG +
Preference number: 6 (lower is better)
Translates to: QSTEGLLSCNFT*PMPDRWMDGLE
Trigger: CTCTAATCCATCCATCCATCTATCCGGCATGGGTCATGTAAAGTTACAGCTGAGAAGGCCCTCAGTGGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616956.1
CDS GCA 72 bp ATCTCTGCTATTGATATGCTGCTAGCAAGTTCTTTCTaGTGGGGCCAGATTGTAGAGGTCACCCGAATGGCA +
Preference number: 6 (lower is better)
Translates to: ISAIDMLLASSF*WGQIVEVTRMA
Trigger: TGCCATTCGGGTGACCTCTACAATCTGGCCCCAGCAGAAAGAACTTGCTAGCAGCATATCAATAGCAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356686.2
ENST00000493858.5
ENST00000611360.4
ENST00000615352.4
CDS CCA 72 bp ACAATTCTGCAGGCCATATGTCTATATGGGTCTCCCTaGAACAACAGGAAGGTGTTAGCCGACTGCATTCCT +
Preference number: 6 (lower is better)
Translates to: TILQAICLYGSP*NNRKVLADCIP
Trigger: AGGAATGCAGTCGGCTAACACCTTCCTGTTGTTCCAGGGAGACCCATATAGACATATGGCCTGCAGAATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000606019.5
ENST00000622128.1
ENST00000622838.4
CDS TCA 72 bp TCACTGTATCCAGCCCTTCTCAGCTGTAACTTTACATaGCCCATGCCGGATAGATGGATGGATGGATTAGAG +
Preference number: 6 (lower is better)
Translates to: SLYPALLSCNFT*PMPDRWMDGLE
Trigger: CTCTAATCCATCCATCCATCTATCCGGCATGGGTCATGTAAAGTTACAGCTGAGAAGGGCTGGATACAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606019.5
CDS GCA 72 bp TCATCAGTGAGAACATGGCCGTTTTCTTTTGGATGGTaGCCTAATCTTCCCGAAGTCAGCTTGCTAGTAAGC +
Preference number: 6 (lower is better)
Translates to: SSVRTWPFSFGW*PNLPEVSLLVS
Trigger: GCTTACTAGCAAGCTGACTTCGGGAAGATTAGGGCACCATCCAAAAGAAAACGGCCATGTTCTCACTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618028.4
CDS CCA 72 bp TTCAATAGGCCAGCTTTCTACGACACAGCTCTATGTTaGCGGATTATGAAGCAACTTGAAAGCGAGCTTCGG +
Preference number: 6 (lower is better)
Translates to: FNRPAFYDTALC*RIMKQLESELR
Trigger: CCGAAGCTCGCTTTCAAGTTGCTTCATAATCCGCCAACATAGAGCTGTGTCGTAGAAAGCTGGCCTATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476463.1
CDS CCA 72 bp CGATCCGGTATCCTAAATATCTCATCAGTGAGAACATaGCCGTTTTCTTTTGGATGGTGCCCTTCCAGATCC +
Preference number: 6 (lower is better)
Translates to: RSGILNISSVRT*PFSFGWCPSRS
Trigger: GGATCTGGAAGGGCACCATCCAAAAGAAAACGGCCATGTTCTCACTGATGAGATATTTAGGATACCGGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606019.5
CDS CCA 72 bp ATCTCATCAGTGAGAACATGGCCGTTTTCTTTTGGATaGTGCCCTAATCTTCCCGAAGTCAGCTTGCTAGTA +
Preference number: 6 (lower is better)
Translates to: ISSVRTWPFSFG*CPNLPEVSLLV
Trigger: TACTAGCAAGCTGACTTCGGGAAGATTAGGGCACCATCCAAAAGAAAACGGCCATGTTCTCACTGATGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618028.4
CDS CCA 72 bp CGATCCGGTATCCTAAATATCTCATCAGTGAGAACATaGCCGTTTTCTTTTGGATGGTGCCCTAATCTTCCC +
Preference number: 6 (lower is better)
Translates to: RSGILNISSVRT*PFSFGWCPNLP
Trigger: GGGAAGATTAGGGCACCATCCAAAAGAAAACGGCCATGTTCTCACTGATGAGATATTTAGGATACCGGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618028.4
CDS CCA 72 bp TTCTATCTTCTGCCAAAGTTGCTGGAAGCTCTCATATaGCAAGGGGCTTGGTACCTTTGCCTTCTTTCTTAT +
Preference number: 6 (lower is better)
Translates to: FYLLPKLLEALI*QGAWYLCLLSY
Trigger: ATAAGAAAGAAGGCAAAGGTACCAAGCCCCTTGCCATATGAGAGCTTCCAGCAACTTTGGCAGAAGATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000606019.5
ENST00000616956.1
CDS CCA 72 bp CGATCCGGTATCCTAAATATCTCATCAGTGAGAACATaGCCGTTTTCTTTTGGATGGTGCCCTTTGCATTAC +
Preference number: 6 (lower is better)
Translates to: RSGILNISSVRT*PFSFGWCPLHY
Trigger: GTAATGCAAAGGGCACCATCCAAAAGAAAACGGCCATGTTCTCACTGATGAGATATTTAGGATACCGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622128.1
CDS CCA 72 bp GAAAAGGAAACATGCCAGCCTTCTAGTAAAGGCCTTTaGATTAAATTCTCTGAAGGAAACTGGCCTCACCTA +
Preference number: 6 (lower is better)
Translates to: EKETCQPSSKGL*IKFSEGNWPHL
Trigger: TAGGTGAGGCCAGTTTCCTTCAGAGAATTTAATCCAAAGGCCTTTACTAGAAGGCTGGCATGTTTCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606019.5
CDS TCA 72 bp ATGTCTATGAGGGTGTTTCTGGATAGAATTAGCATTTaGATTGCTGGATTCAGTAAAGAAGACTGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: MSMRVFLDRISI*IAGFSKEDCPP
Trigger: GGGAGGGCAGTCTTCTTTACTGAATCCAGCAATTCAAATGCTAATTCTATCCAGAAACACCCTCATAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616956.1
CDS CCA 72 bp CAAAACACAACACCAACAACCCTAAAGCAAGTTGAATaGCAGGAAGATACCAGTGTGAAATTCAAAACTGCA +
Preference number: 6 (lower is better)
Translates to: QNTTPTTLKQVE*QEDTSVKFKTA
Trigger: TGCAGTTTTGAATTTCACACTGGTATCTTCCTGCCATTCAACTTGCTTTAGGGTTGTTGGTGTTGTGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482389.1
CDS CAA 90 bp AATAACCAGCTTCCTAAACTGTTAAGTAGGTCGCTTCCATCTGCATaGGTCCCTAAAAAGGAAATAATCATGTGTCAAAAGATTCAAGCC +
Preference number: 6 (lower is better)
Translates to: NNQLPKLLSRSLPSA*VPKKEIIMCQKIQA
Trigger: GGCTTGAATCTTTTGACACATGATTATTTCCTTTTTAGGGACCAATGCAGATGGAAGCGACCTACTTAACAGTTTAGGAAGCTGGTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482389.1
CDS CCA 72 bp AGTAAAGGCCTTTGGATTAAATTCTCTGAAGGAAACTaGCCTCACCTAATAAACTCACCAGAACATAAAAGG +
Preference number: 6 (lower is better)
Translates to: SKGLWIKFSEGN*PHLINSPEHKR
Trigger: CCTTTTATGTTCTGGTGAGTTTATTAGGTGAGGCCAGTTTCCTTCAGAGAATTTAATCCAAAGGCCTTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606019.5
CDS CAA 72 bp CTTCCTAAACTGTTAAGTAGGTCGCTTCCATCTGCATaGGTCCCTAAAAAGGAAATAATCATGTGTCAAAAG +
Preference number: 6 (lower is better)
Translates to: LPKLLSRSLPSA*VPKKEIIMCQK
Trigger: CTTTTGACACATGATTATTTCCTTTTTAGGGACCAATGCAGATGGAAGCGACCTACTTAACAGTTTAGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482389.1
CDS TCA 72 bp AGGCATTTGGCTAAACATCATTTCCAGGTATGTCTATaGGGGTGTTTCTGGATAGAATTAGCATTTGAATTG +
Preference number: 6 (lower is better)
Translates to: RHLAKHHFQVCL*GCFWIELAFEL
Trigger: CAATTCAAATGCTAATTCTATCCAGAAACACCCTCATAGACATACCTGGAAATGATGTTTAGCCAAATGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616956.1