RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SELPLG (Homo sapiens)

Ensembl gene IDs: ENSG00000110876

Ensembl transcript IDs: ENST00000228463.6, ENST00000388962.4, ENST00000550948.2

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCAGTGCGTGTGGGATGGGGGAGCTCCATCTTCCTTGGGTACATaGGGAGGAGACTCCAGTGACCAGGAGAAGCGGGGAGAGCCATGG +
Preference number: 1 (lower is better)
Translates to: VQCVWDGGAPSSLGT*GGDSSDQEKRGEPW
Trigger: CCATGGCTCTCCCCGCTTCTCCTGGTCACTGGAGTCTCCTCCCCATGTACCCAAGGAAGATGGAGCTCCCCCATCCCACACGCACTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR GCA 90 bp GGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTaGTCTTGTCCTGTTTGGGTGGCCAGAGTTCCTTCCCTGAAGATC +
Preference number: 1 (lower is better)
Translates to: GGKRWLHLPVCLAPG*SCPVWVARVPSLKI
Trigger: GATCTTCAGGGAAGGAACTCTGGCCACCCAAACAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR CCA 90 bp ATGGAAGCTCCTTGGTCCACACAGTCCCAAAGAAAGGTCTGCCCTTaGGCCCACGAAACCCATCCCAGCCCTCACAGGCTGAACCTCACC +
Preference number: 1 (lower is better)
Translates to: MEAPWSTQSQRKVCP*AHETHPSPHRLNLT
Trigger: GGTGAGGTTCAGCCTGTGAGGGCTGGGATGGGTTTCGTGGGCCCAAGGGCAGACCTTTCTTTGGGACTGTGTGGACCAAGGAGCTTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CCA 90 bp GTCCACCCTGGAAAGTGGCCACAGGGGAAGGCAAGAGGCGATAGCTaGGGGTCACTTGTCACTAGATGGAAGCTCCTTGGTCCACACAGT +
Preference number: 1 (lower is better)
Translates to: VHPGKWPQGKARGDS*GSLVTRWKLLGPHS
Trigger: ACTGTGTGGACCAAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCCCCTGTGGCCACTTTCCAGGGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CCA 90 bp CAGTTGGGATACTGCAGTGAACAAGACAGAGTCCACCCTGGAAAGTaGCCACAGGGGAAGGCAAGAGGCGATAGCTGGGGGTCACTTGTC +
Preference number: 1 (lower is better)
Translates to: QLGYCSEQDRVHPGK*PQGKARGDSWGSLV
Trigger: GACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCCCCTGTGGCCACTTTCCAGGGTGGACTCTGTCTTGTTCACTGCAGTATCCCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CCA 90 bp CAGGGGAAGGCAAGAGGCGATAGCTGGGGGTCACTTGTCACTAGATaGAAGCTCCTTGGTCCACACAGTCCCAAAGAAAGGTCTGCCCTT +
Preference number: 1 (lower is better)
Translates to: QGKARGDSWGSLVTR*KLLGPHSPKERSAL
Trigger: AAGGGCAGACCTTTCTTTGGGACTGTGTGGACCAAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR GCA 90 bp TCCACTTCCTGTTTGGTGACCATGGCAACCAAAAGACAATGGCAGTaGAGTGCGTGTGGGATGGGGGAGCTCCATCTTCCTTGGGTACAT +
Preference number: 1 (lower is better)
Translates to: STSCLVTMATKRQWQ*SACGMGELHLPWVH
Trigger: ATGTACCCAAGGAAGATGGAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATGGTCACCAAACAGGAAGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CCA 90 bp AGAATGTCCACTTCCTGTTTGGTGACCATGGCAACCAAAAGACAATaGCAGTGCAGTGCGTGTGGGATGGGGGAGCTCCATCTTCCTTGG +
Preference number: 1 (lower is better)
Translates to: RMSTSCLVTMATKRQ*QCSACGMGELHLPW
Trigger: CCAAGGAAGATGGAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATGGTCACCAAACAGGAAGTGGACATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR TCA 90 bp TCACTCTTCAGTACTCCTCCCTTAGAATGTCCACTTCCTGTTTGGTaGCCATGGCAACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGA +
Preference number: 1 (lower is better)
Translates to: SLFSTPPLECPLPVW*PWQPKDNGSAVRVG
Trigger: TCCCACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATGGTCACCAAACAGGAAGTGGACATTCTAAGGGAGGAGTACTGAAGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CCA 90 bp AAGGATTCCGCTATCGTTTGTCCATCACATATTTATTGCCTGCACTaGACCTGCAGTTGGGATACTGCAGTGAACAAGACAGAGTCCACC +
Preference number: 1 (lower is better)
Translates to: KDSAIVCPSHIYCLH*TCSWDTAVNKTEST
Trigger: GGTGGACTCTGTCTTGTTCACTGCAGTATCCCAACTGCAGGTCCAGTGCAGGCAATAAATATGTGATGGACAAACGATAGCGGAATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR CCA 90 bp CGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGGCCCAGGAGAGCCCGTaGAGGTGGGGTCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: RGGRKEVAPLARLLGPRLAQESP*RWGLAK
Trigger: TTTGGCAAGACCCCACCTCCACGGGCTCTCCTGGGC...CAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR-3UTR CCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGCTGGGCACTCAGGGGTaGCCCAGGAGAGCCCGTGGA +
Preference number: 2 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLLGTQG*PRRARG
Trigger: TCCACGGGCTCTCCTGGGCCACCCCTGAGTGCCCAG...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR-3UTR CCA 90 bp GGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCCCCAGAGCTGTGGAATaGGGTCTGGGCACTCAGGGG +
Preference number: 2 (lower is better)
Translates to: GGRKEVAPLARLLGPRLLPRAVE*GLGTQG
Trigger: CCCCTGAGTGCCCAGACCCCATTCCACAGCTCTGGG...GAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR-3UTR CCA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCGCCCAGGAGAGCCCGTaGAGGTGGGGTCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSAQESP*RWGLAK
Trigger: TTTGGCAAGACCCCACCTCCACGGGCTCTCCTGGGC...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR CAA 90 bp TCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTaGGCCCCAGGCTGCTCTTGTCCTGTTTGGGTGGCCAGAGTTCCT +
Preference number: 2 (lower is better)
Translates to: SSAEGGKRWLHLPVC*APGCSCPVWVARVP
Trigger: AGGAACTCTGGCCACCCAAACAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR-3UTR CCA 90 bp GGTGACCATGGCAACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGACTGGGCACTCAGGGGTaGCCCAGGAGAGCCCGTGGA +
Preference number: 2 (lower is better)
Translates to: GDHGNQKTMAVQCVWDGGLGTQG*PRRARG
Trigger: TCCACGGGCTCTCCTGGGCCACCCCTGAGTGCCCAG...TCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATGGTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR GCA 90 bp GCTCCTTGGTCCACACAGTCCCAAAGAAAGGTCTGCCCTTGGGCCCACGAAACCAGAGGTGGCTCCACTTaGCCGTCTGCTTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: APWSTQSQRKVCPWAHETRGGST*PSAWPQ
Trigger: CTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCT...GGTTTCGTGGGCCCAAGGGCAGACCTTTCTTTGGGACTGTGTGGACCAAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR CCA 90 bp GGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCGAGAGCCCGTGGAGGTaGGGTCTTGCCAAAACAGAT +
Preference number: 2 (lower is better)
Translates to: GFIRGGRKEVAPLARLLGESPWR*GLAKTD
Trigger: ATCTGTTTTGGCAAGACCCCACCTCCACGGGCTCTC...GCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR-3UTR CCA 90 bp ATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGTGCTCTTGTCCTGTTTaGGTGGCCAGAGTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: IRGGRKEVAPLARLLGPRCSCPV*VARVPS
Trigger: GGAAGGAACTCTGGCCACCCAAACAGGACAAGAGCA...CCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR-3UTR TCA 90 bp GGGGGAGCTCCATCTTCCTTGGGTACATGGGGAGGAGACTCCAGTGACCAGGAGGCCTTGGACCTCGGCTaGAATGTGGCTGGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: GGAPSSLGTWGGDSSDQEALDLG*NVAGLH
Trigger: ATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGC...CTCCTGGTCACTGGAGTCTCCTCCCCATGTACCCAAGGAAGATGGAGCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR GCA 90 bp AAGTGGAATAAAGTGGTCACTGGTGGGGAAGGGGCAGCCCTCCCTTTGGCCCCCACAATGGCAGTGCAGTaGGTGTGGGATGGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: KWNKVVTGGEGAALPLAPTMAVQ*VWDGGA
Trigger: AGCTCCCCCATCCCACACGCACTGCACTGCCATTGT...GGGGGCCAAAGGGAGGGCTGCCCCTTCCCCACCAGTGACCACTTTATTCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR CCA 90 bp GCTCCTTGGTCCACACAGTCCCAAAGAAAGGTCTGCCCTTGGGCCCACGAAACCCGGCTGAAATGTGGCTaGGCTTCATCCGCGGAGGGA +
Preference number: 2 (lower is better)
Translates to: APWSTQSQRKVCPWAHETRLKCG*ASSAEG
Trigger: TCCCTCCGCGGATGAAGCCCAGCCACATTTCAGCCG...GGTTTCGTGGGCCCAAGGGCAGACCTTTCTTTGGGACTGTGTGGACCAAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CAA 90 bp AAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTaGTCCTGTTTGGGTGGCCAGAGTTCCTTCCCTGAAGATCCCCAT +
Preference number: 2 (lower is better)
Translates to: KEVAPLARLLGPRLL*SCLGGQSSFPEDPH
Trigger: ATGGGGATCTTCAGGGAAGGAACTCTGGCCACCCAAACAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR CAA 90 bp GATGGAAGCTCCTTGGTCCACACAGTCCCAAAGAAAGGTCTGCCCTaGGGCCCACGAAACCCATCCCAGCCCTCACAGGCTGAACCTCAC +
Preference number: 2 (lower is better)
Translates to: DGSSLVHTVPKKGLP*GPRNPSQPSQAEPH
Trigger: GTGAGGTTCAGCCTGTGAGGGCTGGGATGGGTTTCGTGGGCCCAAGGGCAGACCTTTCTTTGGGACTGTGTGGACCAAGGAGCTTCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR GCA 90 bp TGGGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGTGGAGGTGGGGTCTTaGCAAAACAGATGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: WASSAEGGKRWLHLPVCLVEVGS*QNRWQS
Trigger: ACTCTGCCATCTGTTTTGGCAAGACCCCACCTCCAC...CAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR-3UTR CCA 90 bp TGGGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGTGCTCTTGTCCTGTTTaGGTGGCCAGAGTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: WASSAEGGKRWLHLPVCLCSCPV*VARVPS
Trigger: GGAAGGAACTCTGGCCACCCAAACAGGACAAGAGCA...CAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR-3UTR CCA 90 bp AGACAGCTGAGGACCAGCCCCCATCCTGCACTGAGGGATGGAGAATTCCGGGAAGCAGTGCGTGTGGGATaGGGGAGCTCCATCTTCCTT +
Preference number: 2 (lower is better)
Translates to: RQLRTSPHPALRDGEFREAVRVG*GSSIFL
Trigger: AAGGAAGATGGAGCTCCCCCATCCCACACGCACTGC...TTCCCGGAATTCTCCATCCCTCAGTGCAGGATGGGGGCTGGTCCTCAGCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR CCA 90 bp ACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGAGCTCCATCTTCCTGAGGGAGGAAAGAGGTaGCTCCACTTGCCCGTCTGC +
Preference number: 2 (lower is better)
Translates to: TKRQWQCSACGMGELHLPEGGKR*LHLPVC
Trigger: GCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC...AGGAAGATGGAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR CCA 90 bp GGTGACCATGGCAACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGAAAGCGGGGAGAGCCATaGGAGATGTTAGAGGGACCC +
Preference number: 2 (lower is better)
Translates to: GDHGNQKTMAVQCVWDGGKRGEP*EMLEGP
Trigger: GGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTT...TCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATGGTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR CCA 90 bp AGACAGCTGAGGACCAGCCCCCATCCTGCACTGAGGGATGGAGAATTCCGGGAAAGACAGAGTCCACCCTaGAAAGTGGCCACAGGGGAA +
Preference number: 2 (lower is better)
Translates to: RQLRTSPHPALRDGEFRERQSPP*KVATGE
Trigger: TTCCCCTGTGGCCACTTTCCAGGGTGGACTCTGTCT...TTCCCGGAATTCTCCATCCCTCAGTGCAGGATGGGGGCTGGTCCTCAGCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CAA 90 bp CAAGAGGCGATAGCTGGGGGTCACTTGTCACTAGATGGAAGCTCCTaGGTCCACACAGTCCCAAAGAAAGGTCTGCCCTTGGGCCCACGA +
Preference number: 2 (lower is better)
Translates to: QEAIAGGHLSLDGSS*VHTVPKKGLPLGPR
Trigger: TCGTGGGCCCAAGGGCAGACCTTTCTTTGGGACTGTGTGGACCAAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR TCA 90 bp AGACAGCTGAGGACCAGCCCCCATCCTGCACTGAGGGATGGAGAATTCCGGGAAGTTGGGATACTGCAGTaGACAAGACAGAGTCCACCC +
Preference number: 2 (lower is better)
Translates to: RQLRTSPHPALRDGEFREVGILQ*TRQSPP
Trigger: GGGTGGACTCTGTCTTGTTCACTGCAGTATCCCAAC...TTCCCGGAATTCTCCATCCCTCAGTGCAGGATGGGGGCTGGTCCTCAGCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR TCA 90 bp CTGAACTTTTCCTGGTCACCCAAGGATGTACAAGACCCCCTGTTGTCCAAGAGGGCCCCCATCCTGCACTaGGGGATGGAGAATTCCGGG +
Preference number: 2 (lower is better)
Translates to: LNFSWSPKDVQDPLLSKRAPILH*GMENSG
Trigger: CCCGGAATTCTCCATCCCTCAGTGCAGGATGGGGGC...CCTCTTGGACAACAGGGGGTCTTGTACATCCTTGGGTGACCAGGAAAAGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR GCA 90 bp GCTCCATCTTCCTTGGGTACATGGGGAGGAGACTCCAGTGACCAGGAGAAGCGGGTGGAGGTGGGGTCTTaGCAAAACAGATGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: APSSLGTWGGDSSDQEKRVEVGS*QNRWQS
Trigger: ACTCTGCCATCTGTTTTGGCAAGACCCCACCTCCAC...CCGCTTCTCCTGGTCACTGGAGTCTCCTCCCCATGTACCCAAGGAAGATGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR GCA 90 bp CTGAACTTTTCCTGGTCACCCAAGGATGTACAAGACCCCCTGTTGTCCAAGAGGCTCCACTTGCCCGTCTaGTTGGCCCCAGGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: LNFSWSPKDVQDPLLSKRLHLPV*LAPGCS
Trigger: AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAG...CCTCTTGGACAACAGGGGGTCTTGTACATCCTTGGGTGACCAGGAAAAGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR CCA 90 bp GGGAAGGCAAGAGGCGATAGCTGGGGGTCACTTGTCACTAGATGGAAGCTCCTTACCTCGGCTGAAATGTaGCTGGGCTTCATCCGCGGA +
Preference number: 2 (lower is better)
Translates to: GKARGDSWGSLVTRWKLLTSAEM*LGFIRG
Trigger: TCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGT...AAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR CCA 90 bp GGGAAGGCAAGAGGCGATAGCTGGGGGTCACTTGTCACTAGATGGAAGCTCCTTGAGAGCCCGTGGAGGTaGGGTCTTGCCAAAACAGAT +
Preference number: 2 (lower is better)
Translates to: GKARGDSWGSLVTRWKLLESPWR*GLAKTD
Trigger: ATCTGTTTTGGCAAGACCCCACCTCCACGGGCTCTC...AAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CAA 90 bp GAAAGTGGCCACAGGGGAAGGCAAGAGGCGATAGCTGGGGGTCACTaGTCACTAGATGGAAGCTCCTTGGTCCACACAGTCCCAAAGAAA +
Preference number: 2 (lower is better)
Translates to: ESGHRGRQEAIAGGH*SLDGSSLVHTVPKK
Trigger: TTTCTTTGGGACTGTGTGGACCAAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCCCCTGTGGCCACTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR GCA 90 bp GGAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTCGGCGTGGAGGTGGGGTCTTaGCAAAACAGATGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: GKRRESVSSKWPPALDLGVEVGS*QNRWQS
Trigger: ACTCTGCCATCTGTTTTGGCAAGACCCCACCTCCAC...GCCGAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
3UTR-3UTR CCA 90 bp GAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTCGGCTGAGAGCCCGTGGAGGTaGGGTCTTGCCAAAACAGAT +
Preference number: 2 (lower is better)
Translates to: EKGENLSQVNGLLPWTSAESPWR*GLAKTD
Trigger: ATCTGTTTTGGCAAGACCCCACCTCCACGGGCTCTC...AGCCGAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
3UTR-3UTR CCA 90 bp GGAGACAGCCTTGAAACCTTGAAGGATTCCGCTATCGTTTGTCCATCACATATTCCCAGAGCTGTGGAATaGGGTCTGGGCACTCAGGGG +
Preference number: 2 (lower is better)
Translates to: GDSLETLKDSAIVCPSHIPRAVE*GLGTQG
Trigger: CCCCTGAGTGCCCAGACCCCATTCCACAGCTCTGGG...AATATGTGATGGACAAACGATAGCGGAATCCTTCAAGGTTTCAAGGCTGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR CCA 90 bp TTGCCTGCACTGGACCTGCAGTTGGGATACTGCAGTGAACAAGACAGAGTCCACTCTGTCTCAAGTAAATaGCCTCCTGCCTTGGACCTC +
Preference number: 2 (lower is better)
Translates to: LPALDLQLGYCSEQDRVHSVSSK*PPALDL
Trigger: GAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGA...GTGGACTCTGTCTTGTTCACTGCAGTATCCCAACTGCAGGTCCAGTGCAGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CAA 90 bp TCCGTCACTCTTCAGTACTCCTCCCTTAGAATGTCCACTTCCTGTTaGGTGACCATGGCAACCAAAAGACAATGGCAGTGCAGTGCGTGT +
Preference number: 2 (lower is better)
Translates to: SVTLQYSSLRMSTSC*VTMATKRQWQCSAC
Trigger: ACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATGGTCACCAAACAGGAAGTGGACATTCTAAGGGAGGAGTACTGAAGAGTGACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR GCA 90 bp TACAAGACCCCCTGTTGTCCAAGAGGCAAAACTGAAGTCAACCTAACAGCCCATCCATCACATATTTATTaGCTGCACTGGACCTGCAGT +
Preference number: 2 (lower is better)
Translates to: YKTPCCPRGKTEVNLTAHPSHIY*LHWTCS
Trigger: ACTGCAGGTCCAGTGCAGGCAATAAATATGTGATGG...ATGGGCTGTTAGGTTGACTTCAGTTTTGCCTCTTGGACAACAGGGGGTCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR CAA 90 bp GGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCGTGGAGGTGGGGTCTaGCCAAAACAGATGGCAGAG +
Preference number: 3 (lower is better)
Translates to: GFIRGGRKEVAPLARLLGRGGGV*PKQMAE
Trigger: CTCTGCCATCTGTTTTGGCAAGACCCCACCTCCACG...GCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR CCA 72 bp ATGGCCTCCTGCCTTGGACCTCGGCTGAAATGTGGCTaGGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTC +
Preference number: 3 (lower is better)
Translates to: MASCLGPRLKCG*ASSAEGGKRWL
Trigger: GAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGCAGGAGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
3UTR-3UTR CAA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCCGTGGAGGTGGGGTCTaGCCAAAACAGATGGCAGAG +
Preference number: 3 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSRGGGV*PKQMAE
Trigger: CTCTGCCATCTGTTTTGGCAAGACCCCACCTCCACG...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR CCA 72 bp CCTTGGTCCACACAGTCCCAAAGAAAGGTCTGCCCTTaGGCCCACGAAACCCATCCCAGCCCTCACAGGCTG +
Preference number: 3 (lower is better)
Translates to: PWSTQSQRKVCP*AHETHPSPHRL
Trigger: CAGCCTGTGAGGGCTGGGATGGGTTTCGTGGGCCCAAGGGCAGACCTTTCTTTGGGACTGTGTGGACCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR GCA 72 bp GAAGCTCCTTGGTCCACACAGTCCCAAAGAAAGGTCTaGCCTTGGGCCCACGAAACCCATCCCAGCCCTCAC +
Preference number: 3 (lower is better)
Translates to: EAPWSTQSQRKV*PWAHETHPSPH
Trigger: GTGAGGGCTGGGATGGGTTTCGTGGGCCCAAGGGCAGACCTTTCTTTGGGACTGTGTGGACCAAGGAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CCA 72 bp GGAGACTCCAGTGACCAGGAGAAGCGGGGAGAGCCATaGGAGATGTTAGAGGGACCCAGAGAAGATGGGGGA +
Preference number: 3 (lower is better)
Translates to: GDSSDQEKRGEP*EMLEGPREDGG
Trigger: TCCCCCATCTTCTCTGGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTTCTCCTGGTCACTGGAGTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
3UTR-3UTR CAA 90 bp GTCCACACAGTCCCAAAGAAAGGTCTGCCCTTGGGCCCACGAAACCCATCCCAGCGTGGAGGTGGGGTCTaGCCAAAACAGATGGCAGAG +
Preference number: 3 (lower is better)
Translates to: VHTVPKKGLPLGPRNPSQRGGGV*PKQMAE
Trigger: CTCTGCCATCTGTTTTGGCAAGACCCCACCTCCACG...CTGGGATGGGTTTCGTGGGCCCAAGGGCAGACCTTTCTTTGGGACTGTGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR CAA 90 bp AGACAGCTGAGGACCAGCCCCCATCCTGCACTGAGGGATGGAGAATTCCGGGAACTGCTCTTGTCCTGTTaGGGTGGCCAGAGTTCCTTC +
Preference number: 3 (lower is better)
Translates to: RQLRTSPHPALRDGEFRELLLSC*GGQSSF
Trigger: GAAGGAACTCTGGCCACCCAAACAGGACAAGAGCAG...TTCCCGGAATTCTCCATCCCTCAGTGCAGGATGGGGGCTGGTCCTCAGCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CCA 72 bp TACTGCAGTGAACAAGACAGAGTCCACCCTGGAAAGTaGCCACAGGGGAAGGCAAGAGGCGATAGCTGGGGG +
Preference number: 3 (lower is better)
Translates to: YCSEQDRVHPGK*PQGKARGDSWG
Trigger: CCCCCAGCTATCGCCTCTTGCCTTCCCCTGTGGCCACTTTCCAGGGTGGACTCTGTCTTGTTCACTGCAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR GCA 72 bp GGTGACCATGGCAACCAAAAGACAATGGCAGTGCAGTaGGTGTGGGATGGGGGAGCTCCATCTTCCTTGGGT +
Preference number: 3 (lower is better)
Translates to: GDHGNQKTMAVQ*VWDGGAPSSLG
Trigger: ACCCAAGGAAGATGGAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATGGTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CCA 72 bp GGAAAGTGGCCACAGGGGAAGGCAAGAGGCGATAGCTaGGGGTCACTTGTCACTAGATGGAAGCTCCTTGGT +
Preference number: 3 (lower is better)
Translates to: GKWPQGKARGDS*GSLVTRWKLLG
Trigger: ACCAAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCCCCTGTGGCCACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR CAA 90 bp GGACAGGAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCCACTTGCCCGTCTGCTaGGCCCCAGGCTGCTCTTGT +
Preference number: 3 (lower is better)
Translates to: GQEKGENLSQVNGLLPWTHLPVC*APGCSC
Trigger: ACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTG...GGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTCCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
3UTR CCA 72 bp CATGGCAACCAAAAGACAATGGCAGTGCAGTGCGTGTaGGATGGGGGAGCTCCATCTTCCTTGGGTACATGG +
Preference number: 3 (lower is better)
Translates to: HGNQKTMAVQCV*DGGAPSSLGTW
Trigger: CCATGTACCCAAGGAAGATGGAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR TCA 72 bp ATTGCCTGCACTGGACCTGCAGTTGGGATACTGCAGTaGACAAGACAGAGTCCACCCTGGAAAGTGGCCACA +
Preference number: 3 (lower is better)
Translates to: IACTGPAVGILQ*TRQSPPWKVAT
Trigger: TGTGGCCACTTTCCAGGGTGGACTCTGTCTTGTTCACTGCAGTATCCCAACTGCAGGTCCAGTGCAGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR GCA 72 bp TGTTTGGTGACCATGGCAACCAAAAGACAATGGCAGTaGAGTGCGTGTGGGATGGGGGAGCTCCATCTTCCT +
Preference number: 3 (lower is better)
Translates to: CLVTMATKRQWQ*SACGMGELHLP
Trigger: AGGAAGATGGAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATGGTCACCAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CCA 72 bp GCAAGAGGCGATAGCTGGGGGTCACTTGTCACTAGATaGAAGCTCCTTGGTCCACACAGTCCCAAAGAAAGG +
Preference number: 3 (lower is better)
Translates to: ARGDSWGSLVTR*KLLGPHSPKER
Trigger: CCTTTCTTTGGGACTGTGTGGACCAAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR GCA 72 bp TATTTATTGCCTGCACTGGACCTGCAGTTGGGATACTaGAGTGAACAAGACAGAGTCCACCCTGGAAAGTGG +
Preference number: 3 (lower is better)
Translates to: YLLPALDLQLGY*SEQDRVHPGKW
Trigger: CCACTTTCCAGGGTGGACTCTGTCTTGTTCACTGCAGTATCCCAACTGCAGGTCCAGTGCAGGCAATAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR-3UTR CAA 90 bp AGCCTTGAAACCTTGAAGGATTCCGCTATCGTTTGTCCATCACATATTTATTGCAAGAAAGGTCTGCCCTaGGGCCCACGAAACCCATCC +
Preference number: 3 (lower is better)
Translates to: SLETLKDSAIVCPSHIYCKKGLP*GPRNPS
Trigger: GGATGGGTTTCGTGGGCCCAAGGGCAGACCTTTCTT...GCAATAAATATGTGATGGACAAACGATAGCGGAATCCTTCAAGGTTTCAAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp CCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGGCCCCCATTGGCTGTaGCAGAGGGCCCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: PRREERGGSTCPSAWPQAGPHWL*QRAPHP
Trigger: GGGGTGAGGGGCCCTCTGCCACAGCCAATGGGGGCC...AGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCCGCACGGGGTACATGTaGCCCTTGCGGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GGRKEVAPLARLLGPRLLRTGYM*PLRERR
Trigger: CCGCCTCTCCCGCAAGGGCCACATGTACCCCGTGCG...GAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTGGCCCCCATTGGCTGTaGCAGAGGGCCCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSGPHWL*QRAPHP
Trigger: GGGGTGAGGGGCCCTCTGCCACAGCCAATGGGGGCC...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp CCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTTCAGGCCCGGGCTCTTaGCCTTGGACAGGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: PRREERGGSTCPSAWPQASGPGS*PWTGPH
Trigger: ATGGGGGCCTGTCCAAGGCCAAGAGCCCGGGCCTGA...AGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp TTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCCCTCACGGTCCTCCCTaGGCTCTGGCGTCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: FIRGGRKEVAPLARLLGPPHGPP*ALASGP
Trigger: CGGGCCTGACGCCAGAGCCCAGGGAGGACCGTGAGG...GGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCCTGGGCACTCAGGGGTaGCCCAGGAGAGCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: GGRKEVAPLARLLGPRLLLGTQG*PRRARG
Trigger: TCCACGGGCTCTCCTGGGCCACCCCTGAGTGCCCAG...GAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp CCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTAGAGGTGGCTCCACTTaGCCGTCTGCTTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PRREERGGSTCPSAWPQARGGST*PSAWPQ
Trigger: CTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCT...AGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp CGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGGGGCCTCTGTGGCACTaGGTTCTGTGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RGGRKEVAPLARLLGPRLGPLWH*VLWTGP
Trigger: AGGCCCTGTCCACAGAACCCAGTGCCACAGAGGCCC...CAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTCGCACGGGGTACATGTaGCCCTTGCGGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSRTGYM*PLRERR
Trigger: CCGCCTCTCCCGCAAGGGCCACATGTACCCCGTGCG...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGCCTCCTGCCTTGGACCTCGGCTGAAATGTGGCTGGGCTTCATCCGCGGAGGGTCAGGCCCGGGCTCTTaGCCTTGGACAGGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: GLLPWTSAEMWLGFIRGGSGPGS*PWTGPH
Trigger: ATGGGGGCCTGTCCAAGGCCAAGAGCCCGGGCCTGA...CCCTCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGCAGGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGCCTCACGGTCCTCCCTaGGCTCTGGCGTCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLPHGPP*ALASGP
Trigger: CGGGCCTGACGCCAGAGCCCAGGGAGGACCGTGAGG...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp CCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTCCCAGAGCTGTGGAATaGGGTCTGGGCACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PRREERGGSTCPSAWPQAPRAVE*GLGTQG
Trigger: CCCCTGAGTGCCCAGACCCCATTCCACAGCTCTGGG...AGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp CCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTTGCAGCCAGAAGCCATaGCGCCAGAGGCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PRREERGGSTCPSAWPQACSQKP*RQRQLL
Trigger: AAGCAGCTGCCTCTGGCGGCATGGCTTCTGGCTGCA...AGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228463.6
CDS-3UTR GCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTGGTACATGTGGCCCTTaGGGGAGAGGCGGACCGCCA +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSGTCGP*GRGGPP
Trigger: TGGCGGTCCGCCTCTCCCGCAAGGGCCACATGTACC...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp TCCTGCCTTGGACCTCGGCTGAAATGTGGCTGGGCTTCATCCGCGGAGGGAGGAGGTCCCAGCCCACGCTaGCAGGCACTGCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SCLGPRLKCGWASSAEGGGPSPR*QALLWH
Trigger: GTGCCACAGCAGTGCCTGGCAGCGTGGGCTGGGACC...TCCTCCCTCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp CGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGTGGCACTGGGTTCTGTaGACAGGGCCTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: RGGRKEVAPLARLLGPRLWHWVL*TGPPWL
Trigger: CAGCCATGGAGGCCCTGTCCACAGAACCCAGTGCCA...CAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp CCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTTGCTTCACAGAGATGTaGTCTGGGGCCCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: PRREERGGSTCPSAWPQACFTEM*SGAPTG
Trigger: CCCAGTGGGGGCCCCAGACCACATCTCTGTGAAGCA...AGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR TCA 90 bp CGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCCCCCACTGGGTAGTTaGCGGACAAATTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RGGRKEVAPLARLLGPRLPPLGS*RTNCWL
Trigger: CAGCCAGCAATTTGTCCGTCAACTACCCAGTGGGGG...CAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCACTCCATGGGCATCCTaGAGCCAGAAGCCATGCCGC +
Preference number: 4 (lower is better)
Translates to: GGRKEVAPLARLLGPRLLTPWAS*SQKPCR
Trigger: GCGGCATGGCTTCTGGCTGCAGGATGCCCATGGAGT...GAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228463.6
CDS-3UTR GCA 90 bp CCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTTGTGACTGCCCCTCCTaGATCCAGGCCAGTAGAACG +
Preference number: 4 (lower is better)
Translates to: PRREERGGSTCPSAWPQACDCPS*IQASRT
Trigger: CGTTCTACTGGCCTGGATGCAGGAGGGGCAGTCACA...AGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTGGTCAGCTCTGTGACTaGCCCTCCTGCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSGQLCD*PSCIQA
Trigger: GGCCTGGATGCAGGAGGGGCAGTCACAGAGCTGACC...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GGTGGCCCAGGAGAGCCCGTGGAGGTGGGGTCTTGCCAAAACAGATGGCAGAGTGGTACATGTGGCCCTTaGGGGAGAGGCGGACCGCCA +
Preference number: 4 (lower is better)
Translates to: GGPGEPVEVGSCQNRWQSGTCGP*GRGGPP
Trigger: TGGCGGTCCGCCTCTCCCGCAAGGGCCACATGTACC...ACTCTGCCATCTGTTTTGGCAAGACCCCACCTCCACGGGCTCTCCTGGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp CGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCCTTCTAGACCACTaGCCCCCACTGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: RGGRKEVAPLARLLGPRLLLLDH*PPLPSS
Trigger: GGAAGATGGCAGTGGGGGCCAGTGGTCTAGAAGGAG...CAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228463.6
CDS-3UTR CCA 90 bp GGCCTCCTGCCTTGGACCTCGGCTGAAATGTGGCTGGGCTTCATCCGCGGAGGGTGGCACTGGGTTCTGTaGACAGGGCCTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GLLPWTSAEMWLGFIRGGWHWVL*TGPPWL
Trigger: CAGCCATGGAGGCCCTGTCCACAGAACCCAGTGCCA...CCCTCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGCAGGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTGGGCCTCTGTGGCACTaGGTTCTGTGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSGPLWH*VLWTGP
Trigger: AGGCCCTGTCCACAGAACCCAGTGCCACAGAGGCCC...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp AAGTGGAATAAAGTGGTCACTGGTGGGGAAGGGGCAGCCCTCCCTTTGGCCCCCCGCACGGGGTACATGTaGCCCTTGCGGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: KWNKVVTGGEGAALPLAPRTGYM*PLRERR
Trigger: CCGCCTCTCCCGCAAGGGCCACATGTACCCCGTGCG...GGGGGCCAAAGGGAGGGCTGCCCCTTCCCCACCAGTGACCACTTTATTCCACTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp ATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGGAGGGAGGAAAGAGGTaGCTCCACTTGCCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: IRGGRKEVAPLARLLGPREGGKR*LHLPVC
Trigger: GCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC...CCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR CAA 72 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTaGGCCCCAGGCTGCTCTTGTCCTGTTTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVC*APGCSCPVWVA
Trigger: GGCCACCCAAACAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR CAA 72 bp GCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTaGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: ASSAEGGKRWLH*PVCLAPGCSCP
Trigger: AGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR TCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGTCCGTGGGCACTGGTTaGGTGGTCTGTGCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLSVGTG*VVCASV
Trigger: CACGGAGGCACAGACCACTCAACCAGTGCCCACGGA...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228463.6
ENST00000550948.2
CDS-3UTR TCA 90 bp ATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCCCCCACTGGGTAGTTaGCGGACAAATTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: IRGGRKEVAPLARLLGPRPPLGS*RTNCWL
Trigger: CAGCCAGCAATTTGTCCGTCAACTACCCAGTGGGGG...CCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGCAGGTGTCCCACAGCTaGAAGCTGTTGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLQVSHS*KLLPGP
Trigger: GGGCCCTGGCAACAGCTTGCAGCTGTGGGACACCTG...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp ATGGCCTCCTGCCTTGGACCTCGGCTGAAATGTGGCTGGGCTTCATCCGCGGAGCAGGTGTCCCACAGCTaGAAGCTGTTGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: MASCLGPRLKCGWASSAEQVSHS*KLLPGP
Trigger: GGGCCCTGGCAACAGCTTGCAGCTGTGGGACACCTG...CTCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGCAGGAGGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCCTCCACTTGCCCGTCTaGTTGGCCCCAGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSLHLPV*LAPGCS
Trigger: AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAG...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp TTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCGGTACTCATATTCGGTaGCCTGTCTCCGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: FIRGGRKEVAPLARLLGPGTHIR*PVSGPG
Trigger: CCCGGGACCGGAGACAGGCCACCGAATATGAGTACC...GGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp ATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGACAGGTTCCCCATGTTaGCCAGCTCCGTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: IRGGRKEVAPLARLLGPRTGSPC*PAPWSA
Trigger: AGCTGACCACGGAGCTGGCCAACATGGGGAACCTGT...CCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp TGGGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGGGCCTCTGTGGCACTaGGTTCTGTGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: WASSAEGGKRWLHLPVCLGPLWH*VLWTGP
Trigger: AGGCCCTGTCCACAGAACCCAGTGCCACAGAGGCCC...CAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp CCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGTCTGGGGCCCCCACTaGGTAGTTGACGGACAAATT +
Preference number: 4 (lower is better)
Translates to: PRREERGGSTCPSAWPQAVWGPH*VVDGQI
Trigger: AATTTGTCCGTCAACTACCCAGTGGGGGCCCCAGAC...AGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGCCCAGAGCTGTGGAATaGGGTCTGGGCACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLPRAVE*GLGTQG
Trigger: CCCCTGAGTGCCCAGACCCCATTCCACAGCTCTGGG...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp TTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCGAGGGAGGAAAGAGGTaGCTCCACTTGCCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: FIRGGRKEVAPLARLLGPEGGKR*LHLPVC
Trigger: GCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC...GGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTCGGCTGAAATGTGGCTaGGCTTCATCCGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSRLKCG*ASSAEG
Trigger: TCCCTCCGCGGATGAAGCCCAGCCACATTTCAGCCG...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGCCTCCTGCCTTGGACCTCGGCTGAAATGTGGCTGGGCTTCATCCGCGGAGGGACCTCGGCTGAAATGTaGCTGGGCTTCATCCGCGGA +
Preference number: 4 (lower is better)
Translates to: GLLPWTSAEMWLGFIRGGTSAEM*LGFIRG
Trigger: TCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGT...CCCTCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGCAGGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGCCTCCTGCCTTGGACCTCGGCTGAAATGTGGCTGGGCTTCATCCGCGGAGGGAAGCGGGGAGAGCCATaGGAGATGTTAGAGGGACCC +
Preference number: 4 (lower is better)
Translates to: GLLPWTSAEMWLGFIRGGKRGEP*EMLEGP
Trigger: GGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTT...CCCTCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGCAGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR TCA 90 bp TTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCGCCTTGGACCTCGGCTaGAATGTGGCTGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: FIRGGRKEVAPLARLLGPALDLG*NVAGLH
Trigger: ATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGC...GGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR TCA 90 bp CCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGTTGGGATACTGCAGTaGACAAGACAGAGTCCACCC +
Preference number: 4 (lower is better)
Translates to: PRREERGGSTCPSAWPQAVGILQ*TRQSPP
Trigger: GGGTGGACTCTGTCTTGTTCACTGCAGTATCCCAAC...AGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTGCCAGTAGAACGCCTTaGAGCAGGCTCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSASRTP*SRLHSG
Trigger: ACCACTGTGGAGCCTGCTGCAAGGCGTTCTACTGGC...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCTGTGACTGCCCCTCCTaGATCCAGGCCAGTAGAACG +
Preference number: 4 (lower is better)
Translates to: GFIRGGRKEVAPLARLLGCDCPS*IQASRT
Trigger: CGTTCTACTGGCCTGGATGCAGGAGGGGCAGTCACA...GCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTGCAACAGGGATGAGATaGAGACCATCTCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSATGMR*RPSRWG
Trigger: CCCCCACCGAGATGGTCTGCATCTCATCCCTGTTGC...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GGAGAAGCGGGGAGAGCCATGGGAGATGTTAGAGGGACCCAGAGAAGATGGGGGCTCCACTTGCCCGTCTaGTTGGCCCCAGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GEAGRAMGDVRGTQRRWGLHLPV*LAPGCS
Trigger: AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAG...CCCCCATCTTCTCTGGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GGAGAAGCGGGGAGAGCCATGGGAGATGTTAGAGGGACCCAGAGAAGATGGGGGAGAGGTGGCTCCACTTaGCCGTCTGCTTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GEAGRAMGDVRGTQRRWGRGGST*PSAWPQ
Trigger: CTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCT...CCCCCATCTTCTCTGGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp AAGTGGAATAAAGTGGTCACTGGTGGGGAAGGGGCAGCCCTCCCTTTGGCCCCCAGAGGTGGCTCCACTTaGCCGTCTGCTTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KWNKVVTGGEGAALPLAPRGGST*PSAWPQ
Trigger: CTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCT...GGGGGCCAAAGGGAGGGCTGCCCCTTCCCCACCAGTGACCACTTTATTCCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCGGTACTCATATTCGGTaGCCTGTCTCCGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSGTHIR*PVSGPG
Trigger: CCCGGGACCGGAGACAGGCCACCGAATATGAGTACC...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp CGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGGTTCCTCAGCATTTCTaGAGGCTCCGTTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RGGRKEVAPLARLLGPRLVPQHF*RLRFWQ
Trigger: CTGCCAGAAACGGAGCCTCCAGAAATGCTGAGGAAC...CAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp ATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGGCCCAGTCAGAGGAGTaGTGTCAGTGCTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: IRGGRKEVAPLARLLGPRAQSEE*CQCCSS
Trigger: TGAGGAACAGCACTGACACCACTCCTCTGACTGGGC...CCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTCACAGAGATGTGGTCTaGGGCCCCCACTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSHRDVV*GPHWVV
Trigger: AACTACCCAGTGGGGGCCCCAGACCACATCTCTGTG...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTGCAGACCATCTCGGTaGGGGAGTAATTACGCACGG +
Preference number: 4 (lower is better)
Translates to: GGRKEVAPLARLLGPRLLCRPSR*GSNYAR
Trigger: CCGTGCGTAATTACTCCCCCACCGAGATGGTCTGCA...GAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAGGAGCAGCAGGAAACAGCCTCAGAAGTCCGTCACTCTTCAGTACTCCTCCCTCCTCACGGTCCTCCCTaGGCTCTGGCGTCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: EEQQETASEVRHSSVLLPPHGPP*ALASGP
Trigger: CGGGCCTGACGCCAGAGCCCAGGGAGGACCGTGAGG...AGGGAGGAGTACTGAAGAGTGACGGACTTCTGAGGCTGTTTCCTGCTGCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGGAGGGAGGAAAGAGGTaGCTCCACTTGCCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLEGGKR*LHLPVC
Trigger: GCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp TCCTGCCTTGGACCTCGGCTGAAATGTGGCTGGGCTTCATCCGCGGAGGGAGGACGGCTGAAATGTGGCTaGGCTTCATCCGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SCLGPRLKCGWASSAEGGRLKCG*ASSAEG
Trigger: TCCCTCCGCGGATGAAGCCCAGCCACATTTCAGCCG...TCCTCCCTCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR TCA 90 bp GGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTATCTCCATAGCTGCTaGATCCGTGGACAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GGRKEVAPLARLLGPRLLYLHSC*IRGQVP
Trigger: GGGAACCTGTCCACGGATTCAGCAGCTATGGAGATA...GAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCACCACTGGCCCCCACTaGCATCTTCCTGTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: GGRKEVAPLARLLGPRLLTTGPH*HLPVQV
Trigger: AACTTGAACAGGAAGATGGCAGTGGGGGCCAGTGGT...GAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228463.6
CDS-3UTR GCA 90 bp TTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCACAGCTGCAAGCTGTTaGCAGGGCCCAGTAGGATCA +
Preference number: 4 (lower is better)
Translates to: FIRGGRKEVAPLARLLGPTAASC*QGPVGS
Trigger: TGATCCTACTGGGCCCTGGCAACAGCTTGCAGCTGT...GGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GGTGGCCCAGGAGAGCCCGTGGAGGTGGGGTCTTGCCAAAACAGATGGCAGAGTGCCAGTAGAACGCCTTaGAGCAGGCTCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: GGPGEPVEVGSCQNRWQSASRTP*SRLHSG
Trigger: ACCACTGTGGAGCCTGCTGCAAGGCGTTCTACTGGC...ACTCTGCCATCTGTTTTGGCAAGACCCCACCTCCACGGGCTCTCCTGGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp ACCATGGCAACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGAGCTCGGTACATGTGGCCCTTaGGGGAGAGGCGGACCGCCA +
Preference number: 4 (lower is better)
Translates to: TMATKRQWQCSACGMGELGTCGP*GRGGPP
Trigger: TGGCGGTCCGCCTCTCCCGCAAGGGCCACATGTACC...GAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp TGGGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCAACAGGGATGAGATaGAGACCATCTCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: WASSAEGGKRWLHLPVCLATGMR*RPSRWG
Trigger: CCCCCACCGAGATGGTCTGCATCTCATCCCTGTTGC...CAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GGGAAGGCAAGAGGCGATAGCTGGGGGTCACTTGTCACTAGATGGAAGCTCCTTTGCTGTGGCACCCCCTaGGGCAGTCCCGGATCCGAG +
Preference number: 4 (lower is better)
Translates to: GKARGDSWGSLVTRWKLLCCGTP*GSPGSE
Trigger: CTCGGATCCGGGACTGCCGCAGGGGGTGCCACAGCA...AAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp AGGACCAGCCCCCATCCTGCACTGAGGGATGGAGAATTCCGGGAAGGCTGCCTGACAATGGCAGTGCAGTaGGTGTGGGATGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RTSPHPALRDGEFREGCLTMAVQ*VWDGGA
Trigger: AGCTCCCCCATCCCACACGCACTGCACTGCCATTGT...CAGGCAGCCTTCCCGGAATTCTCCATCCCTCAGTGCAGGATGGGGGCTGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp TGGGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGACAGGTTCCCCATGTTaGCCAGCTCCGTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: WASSAEGGKRWLHLPVCLTGSPC*PAPWSA
Trigger: AGCTGACCACGGAGCTGGCCAACATGGGGAACCTGT...CAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGTGGCCCAGGAGAGCCCGTGGAGGTGGGGTCTTGCCAAAACAGATGGCAGAGTACAGGTTCCCCATGTTaGCCAGCTCCGTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GGPGEPVEVGSCQNRWQSTGSPC*PAPWSA
Trigger: AGCTGACCACGGAGCTGGCCAACATGGGGAACCTGT...ACTCTGCCATCTGTTTTGGCAAGACCCCACCTCCACGGGCTCTCCTGGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGGGGAGCTCCATCTTCCTTGGGTACATGGGGAGGAGACTCCAGTGACCAGGAGTGGCACTGGGTTCTGTaGACAGGGCCTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GGAPSSLGTWGGDSSDQEWHWVL*TGPPWL
Trigger: CAGCCATGGAGGCCCTGTCCACAGAACCCAGTGCCA...CTCCTGGTCACTGGAGTCTCCTCCCCATGTACCCAAGGAAGATGGAGCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GGTGGCCCAGGAGAGCCCGTGGAGGTGGGGTCTTGCCAAAACAGATGGCAGAGTTGGACAGGGCCTCTGTaGCACTGGGTTCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: GGPGEPVEVGSCQNRWQSWTGPL*HWVLWT
Trigger: TGTCCACAGAACCCAGTGCCACAGAGGCCCTGTCCA...ACTCTGCCATCTGTTTTGGCAAGACCCCACCTCCACGGGCTCTCCTGGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp TTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCGTCTGGGGCCCCCACTaGGTAGTTGACGGACAAATT +
Preference number: 4 (lower is better)
Translates to: FIRGGRKEVAPLARLLGPVWGPH*VVDGQI
Trigger: AATTTGTCCGTCAACTACCCAGTGGGGGCCCCAGAC...GGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCGTCTGGGGCCCCCACTaGGTAGTTGACGGACAAATT +
Preference number: 4 (lower is better)
Translates to: GFIRGGRKEVAPLARLLGVWGPH*VVDGQI
Trigger: AATTTGTCCGTCAACTACCCAGTGGGGGCCCCAGAC...GCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGTGGCCCAGGAGAGCCCGTGGAGGTGGGGTCTTGCCAAAACAGATGGCAGAGTCACAGAGATGTGGTCTaGGGCCCCCACTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: GGPGEPVEVGSCQNRWQSHRDVV*GPHWVV
Trigger: AACTACCCAGTGGGGGCCCCAGACCACATCTCTGTG...ACTCTGCCATCTGTTTTGGCAAGACCCCACCTCCACGGGCTCTCCTGGGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp TTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCTGCAGACCATCTCGGTaGGGGAGTAATTACGCACGG +
Preference number: 4 (lower is better)
Translates to: FIRGGRKEVAPLARLLGPCRPSR*GSNYAR
Trigger: CCGTGCGTAATTACTCCCCCACCGAGATGGTCTGCA...GGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTGCTCTTGTCCTGTTTaGGTGGCCAGAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GGRKEVAPLARLLGPRLLCSCPV*VARVPS
Trigger: GGAAGGAACTCTGGCCACCCAAACAGGACAAGAGCA...GAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGGCAGTGCGTGTGGGATaGGGGAGCTCCATCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLAVRVG*GSSIFL
Trigger: AAGGAAGATGGAGCTCCCCCATCCCACACGCACTGC...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCGCAACCAAAAGACAATaGCAGTGCAGTGCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GGRKEVAPLARLLGPRLLATKRQ*QCSACG
Trigger: CCCACACGCACTGCACTGCCATTGTCTTTTGGTTGC...GAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGAGAAAGGTCTGCCCTTaGGCCCACGAAACCCATCCC +
Preference number: 4 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLRKVCP*AHETHP
Trigger: GGGATGGGTTTCGTGGGCCCAAGGGCAGACCTTTCT...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp TGGGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGTCCACCCTGGAAAGTaGCCACAGGGGAAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: WASSAEGGKRWLHLPVCLVHPGK*PQGKAR
Trigger: TCTTGCCTTCCCCTGTGGCCACTTTCCAGGGTGGAC...CAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CAA 72 bp GCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTaGTCCTGTTTGGGTGGCCAGAGTTCCTTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: APLARLLGPRLL*SCLGGQSSFPE
Trigger: TTCAGGGAAGGAACTCTGGCCACCCAAACAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
3UTR CAA 72 bp GTGCAGTGCGTGTGGGATGGGGGAGCTCCATCTTCCTaGGGTACATGGGGAGGAGACTCCAGTGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: VQCVWDGGAPSS*GTWGGDSSDQE
Trigger: CTCCTGGTCACTGGAGTCTCCTCCCCATGTACCCAAGGAAGATGGAGCTCCCCCATCCCACACGCACTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR TCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTATCAGGCAACAGGGATaGGATGCAGACCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSIRQQG*DADHLG
Trigger: ACCGAGATGGTCTGCATCTCATCCCTGTTGCCTGAT...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR TCA 90 bp GGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCATCAGGCAACAGGGATaGGATGCAGACCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: GFIRGGRKEVAPLARLLGIRQQG*DADHLG
Trigger: ACCGAGATGGTCTGCATCTCATCCCTGTTGCCTGAT...GCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR TCA 90 bp ACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGAGCTCCATCTTCCTCTGAGGGCAGACAGCTaGGGACCAGCCCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: TKRQWQCSACGMGELHLPLRADS*GPAPIL
Trigger: CAGGATGGGGGCTGGTCCTCAGCTGTCTGCCCTCAG...AGGAAGATGGAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR TCA 90 bp CCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTTCCAAGAGGCAAAACTaGAGTCAACCTAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: PRREERGGSTCPSAWPQASKRQN*SQPNSP
Trigger: TGGGCTGTTAGGTTGACTTCAGTTTTGCCTCTTGGA...AGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGTTTCTCGGCTTCATCTaGCCAGGTGTCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLFLGFI*PGVPQL
Trigger: CAGCTGTGGGACACCTGGGCAGATGAAGCCGAGAAA...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTATGGCCAGCAGGCACTaGTTCACAGAGATGTGGTCT +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSMASRH*FTEMWS
Trigger: AGACCACATCTCTGTGAAGCAGTGCCTGCTGGCCAT...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp TCCTGCCTTGGACCTCGGCTGAAATGTGGCTGGGCTTCATCCGCGGAGGGAGGAGAATTCCGGGAAGGCTaGCTGAAGGAGACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SCLGPRLKCGWASSAEGGEFREG*LKETAL
Trigger: CAAGGCTGTCTCCTTCAGGCAGCCTTCCCGGAATTC...TCCTCCCTCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GCTCCATCTTCCTTGGGTACATGGGGAGGAGACTCCAGTGACCAGGAGAAGCGGGGTACTCATATTCGGTaGCCTGTCTCCGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: APSSLGTWGGDSSDQEKRGTHIR*PVSGPG
Trigger: CCCGGGACCGGAGACAGGCCACCGAATATGAGTACC...CCGCTTCTCCTGGTCACTGGAGTCTCCTCCCCATGTACCCAAGGAAGATGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTGTTCCTCAGCATTTCTaGAGGCTCCGTTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSVPQHF*RLRFWQ
Trigger: CTGCCAGAAACGGAGCCTCCAGAAATGCTGAGGAAC...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGAGAAGCGGGGAGAGCCATGGGAGATGTTAGAGGGACCCAGAGAAGATGGGGGTGGACAGGGCCTCTGTaGCACTGGGTTCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: GEAGRAMGDVRGTQRRWGWTGPL*HWVLWT
Trigger: TGTCCACAGAACCCAGTGCCACAGAGGCCCTGTCCA...CCCCCATCTTCTCTGGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGGCGCCAAGATTAGGATaGCCAGCAGGCACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLAPRLG*PAGTAS
Trigger: TGAAGCAGTGCCTGCTGGCCATCCTAATCTTGGCGC...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCGCGCCAAGATTAGGATaGCCAGCAGGCACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSAPRLG*PAGTAS
Trigger: TGAAGCAGTGCCTGCTGGCCATCCTAATCTTGGCGC...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAGGAGCAGCAGGAAACAGCCTCAGAAGTCCGTCACTCTTCAGTACTCCTCCCTTCAGGCCCGGGCTCTTaGCCTTGGACAGGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: EEQQETASEVRHSSVLLPSGPGS*PWTGPH
Trigger: ATGGGGGCCTGTCCAAGGCCAAGAGCCCGGGCCTGA...AGGGAGGAGTACTGAAGAGTGACGGACTTCTGAGGCTGTTTCCTGCTGCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGGAGAGCCCGTGGAGGTaGGGTCTTGCCAAAACAGAT +
Preference number: 4 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLESPWR*GLAKTD
Trigger: ATCTGTTTTGGCAAGACCCCACCTCCACGGGCTCTC...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp TTGCCTGCACTGGACCTGCAGTTGGGATACTGCAGTGAACAAGACAGAGTCCACCTGGGCACTCAGGGGTaGCCCAGGAGAGCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: LPALDLQLGYCSEQDRVHLGTQG*PRRARG
Trigger: TCCACGGGCTCTCCTGGGCCACCCCTGAGTGCCCAG...GTGGACTCTGTCTTGTTCACTGCAGTATCCCAACTGCAGGTCCAGTGCAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GTCCACACAGTCCCAAAGAAAGGTCTGCCCTTGGGCCCACGAAACCCATCCCAGGGAGTTGCAGAGGCATaGCACCACCGTGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VHTVPKKGLPLGPRNPSQGVAEA*HHRAQQ
Trigger: CTGCTGAGCACGGTGGTGCCATGCCTCTGCAACTCC...CTGGGATGGGTTTCGTGGGCCCAAGGGCAGACCTTTCTTTGGGACTGTGTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTGGAAGTGGAATAAAGTaGTCACTGGTGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSGSGIK*SLVGKG
Trigger: CCCCTTCCCCACCAGTGACCACTTTATTCCACTTCC...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CAA 72 bp TCCTTGGTCCACACAGTCCCAAAGAAAGGTCTGCCCTaGGGCCCACGAAACCCATCCCAGCCCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: SLVHTVPKKGLP*GPRNPSQPSQA
Trigger: AGCCTGTGAGGGCTGGGATGGGTTTCGTGGGCCCAAGGGCAGACCTTTCTTTGGGACTGTGTGGACCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR TCA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTATCTCCATAGCTGCTaGATCCGTGGACAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSYLHSC*IRGQVP
Trigger: GGGAACCTGTCCACGGATTCAGCAGCTATGGAGATA...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR TCA 90 bp GGGAAGGCAAGAGGCGATAGCTGGGGGTCACTTGTCACTAGATGGAAGCTCCTTTCCGTGGGCACTGGTTaGGTGGTCTGTGCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: GKARGDSWGSLVTRWKLLSVGTG*VVCASV
Trigger: CACGGAGGCACAGACCACTCAACCAGTGCCCACGGA...AAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR TCA 90 bp GCTCCTTGGTCCACACAGTCCCAAAGAAAGGTCTGCCCTTGGGCCCACGAAACCGCCTTGGACCTCGGCTaGAATGTGGCTGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: APWSTQSQRKVCPWAHETALDLG*NVAGLH
Trigger: ATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGC...GGTTTCGTGGGCCCAAGGGCAGACCTTTCTTTGGGACTGTGTGGACCAAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR TCA 90 bp GGTGACCATGGCAACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGACCAGCCCTCACAGGCTaGACCTCACCCTGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: GDHGNQKTMAVQCVWDGGPALTG*TSPWVF
Trigger: GAAAACCCAGGGTGAGGTTCAGCCTGTGAGGGCTGG...TCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATGGTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR TCA 90 bp ACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGAGCTCCATCTTCCTGCCCCCATCCTGCACTaGGGGATGGAGAATTCCGGG +
Preference number: 4 (lower is better)
Translates to: TKRQWQCSACGMGELHLPAPILH*GMENSG
Trigger: CCCGGAATTCTCCATCCCTCAGTGCAGGATGGGGGC...AGGAAGATGGAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp TTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCGAGGAGTGGTGTCAGTaGTGTTCCTCAGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: FIRGGRKEVAPLARLLGPEEWCQ*CSSAFL
Trigger: CAGAAATGCTGAGGAACAGCACTGACACCACTCCTC...GGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GGGAAGGCAAGAGGCGATAGCTGGGGGTCACTTGTCACTAGATGGAAGCTCCTTGGTCAGCTCTGTGACTaGCCCTCCTGCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GKARGDSWGSLVTRWKLLGQLCD*PSCIQA
Trigger: GGCCTGGATGCAGGAGGGGCAGTCACAGAGCTGACC...AAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCGGACAAATTGCTGGCTaGCATGGGAATGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSGQIAG*HGNALV
Trigger: CACAAGGGCATTCCCATGGCAGCCAGCAATTTGTCC...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp AGACAGCTGAGGACCAGCCCCCATCCTGCACTGAGGGATGGAGAATTCCGGGAAGCAACAGGGATGAGATaGAGACCATCTCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RQLRTSPHPALRDGEFREATGMR*RPSRWG
Trigger: CCCCCACCGAGATGGTCTGCATCTCATCCCTGTTGC...TTCCCGGAATTCTCCATCCCTCAGTGCAGGATGGGGGCTGGTCCTCAGCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCGTGGAGGTGGGGTCTTaGCAAAACAGATGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSVEVGS*QNRWQS
Trigger: ACTCTGCCATCTGTTTTGGCAAGACCCCACCTCCAC...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTCGGCTCACGCTGCCAGGCACTaGTGTGGCACCCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: EKGENLSQVNGLLPWTSAHAARH*CGTPCG
Trigger: GCCGCAGGGGGTGCCACAGCAGTGCCTGGCAGCGTG...AGCCGAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp GGGGGAGCTCCATCTTCCTTGGGTACATGGGGAGGAGACTCCAGTGACCAGGAGTCCCAAAGAAAGGTCTaGCCTTGGGCCCACGAAACC +
Preference number: 4 (lower is better)
Translates to: GGAPSSLGTWGGDSSDQESQRKV*PWAHET
Trigger: GGTTTCGTGGGCCCAAGGGCAGACCTTTCTTTGGGA...CTCCTGGTCACTGGAGTCTCCTCCCCATGTACCCAAGGAAGATGGAGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGGGAGTTGCAGAGGCATaGCACCAGCCATCTTATCTC +
Preference number: 4 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLGVAEA*HQPSYL
Trigger: GAGATAAGATGGCTGGTGCCATGCCTCTGCAACTCC...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228463.6
CDS-3UTR CCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGGTTCCTCAGCATTTCTaGAGGCTCCGTTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLVPQHF*RLRFWQ
Trigger: CTGCCAGAAACGGAGCCTCCAGAAATGCTGAGGAAC...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGACAGGAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCGGCCCCCATTGGCTGTaGCAGAGGGCCCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: GQEKGENLSQVNGLLPWTGPHWL*QRAPHP
Trigger: GGGGTGAGGGGCCCTCTGCCACAGCCAATGGGGGCC...GGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTCCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp ACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGAGCTCCATCTTCCTGCCCAGGAGAGCCCGTaGAGGTGGGGTCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: TKRQWQCSACGMGELHLPAQESP*RWGLAK
Trigger: TTTGGCAAGACCCCACCTCCACGGGCTCTCCTGGGC...AGGAAGATGGAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGGGCCCAGAAGAAGTaGCTTCTCTGCTTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSWAQKK*LLCFSD
Trigger: GTCACTAAAGCAGAGAAGCCACTTCTTCTGGGCCCA...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp ACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGAGCTCCATCTTCCTGTGCTCAGCAGAGCATaGGACAGCTGCCTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: TKRQWQCSACGMGELHLPVLSRA*DSCLVG
Trigger: GCCCACGAGGCAGCTGTCCCATGCTCTGCTGAGCAC...AGGAAGATGGAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GGAGAAGCGGGGAGAGCCATGGGAGATGTTAGAGGGACCCAGAGAAGATGGGGGAGACAGAGTCCACCCTaGAAAGTGGCCACAGGGGAA +
Preference number: 4 (lower is better)
Translates to: GEAGRAMGDVRGTQRRWGRQSPP*KVATGE
Trigger: TTCCCCTGTGGCCACTTTCCAGGGTGGACTCTGTCT...CCCCCATCTTCTCTGGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR TCA 90 bp TTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCATGGGAATGCCCTTGTaGGTAACAGAGGACACAGAA +
Preference number: 4 (lower is better)
Translates to: FIRGGRKEVAPLARLLGPMGMPL*VTEDTE
Trigger: TTCTGTGTCCTCTGTTACTCACAAGGGCATTCCCAT...GGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GCTCCTTGGTCCACACAGTCCCAAAGAAAGGTCTGCCCTTGGGCCCACGAAACCTTTCTCGGCTTCATCTaGCCAGGTGTCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: APWSTQSQRKVCPWAHETFLGFI*PGVPQL
Trigger: CAGCTGTGGGACACCTGGGCAGATGAAGCCGAGAAA...GGTTTCGTGGGCCCAAGGGCAGACCTTTCTTTGGGACTGTGTGGACCAAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCGAGGAGTGGTGTCAGTaGTGTTCCTCAGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSEEWCQ*CSSAFL
Trigger: CAGAAATGCTGAGGAACAGCACTGACACCACTCCTC...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp ACCATGGCAACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGAGCTCGCCAGTAGAACGCCTTaGAGCAGGCTCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: TMATKRQWQCSACGMGELASRTP*SRLHSG
Trigger: ACCACTGTGGAGCCTGCTGCAAGGCGTTCTACTGGC...GAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp CATGGCAACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGAGCTCCATGTGACTGCCCCTCCTaGATCCAGGCCAGTAGAACG +
Preference number: 4 (lower is better)
Translates to: HGNQKTMAVQCVWDGGAPCDCPS*IQASRT
Trigger: CGTTCTACTGGCCTGGATGCAGGAGGGGCAGTCACA...TGGAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp GGAGAAGCGGGGAGAGCCATGGGAGATGTTAGAGGGACCCAGAGAAGATGGGGGATGGCCAGCAGGCACTaGTTCACAGAGATGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GEAGRAMGDVRGTQRRWGMASRH*FTEMWS
Trigger: AGACCACATCTCTGTGAAGCAGTGCCTGCTGGCCAT...CCCCCATCTTCTCTGGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp CTTCCTTGGGTACATGGGGAGGAGACTCCAGTGACCAGGAGAAGCGGGGAGAGCATGGCCAGCAGGCACTaGTTCACAGAGATGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LPWVHGEETPVTRRSGESMASRH*FTEMWS
Trigger: AGACCACATCTCTGTGAAGCAGTGCCTGCTGGCCAT...GCTCTCCCCGCTTCTCCTGGTCACTGGAGTCTCCTCCCCATGTACCCAAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp GGAGAAGCGGGGAGAGCCATGGGAGATGTTAGAGGGACCCAGAGAAGATGGGGGGTGGAGGTGGGGTCTTaGCAAAACAGATGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GEAGRAMGDVRGTQRRWGVEVGS*QNRWQS
Trigger: ACTCTGCCATCTGTTTTGGCAAGACCCCACCTCCAC...CCCCCATCTTCTCTGGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTTCTCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp TTGCCTGCACTGGACCTGCAGTTGGGATACTGCAGTGAACAAGACAGAGTCCACCTCCACTTGCCCGTCTaGTTGGCCCCAGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LPALDLQLGYCSEQDRVHLHLPV*LAPGCS
Trigger: AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAG...GTGGACTCTGTCTTGTTCACTGCAGTATCCCAACTGCAGGTCCAGTGCAGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCTCTTGCCAAAACAGATaGCAGAGTGAGCTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GFIRGGRKEVAPLARLLGSCQNR*QSELRE
Trigger: CTCCCTTAGCTCACTCTGCCATCTGTTTTGGCAAGA...GCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGTCTGTCTCAAGTAAATaGCCTCCTGCCTTGGACCTC +
Preference number: 4 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLSVSSK*PPALDL
Trigger: GAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGA...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGACAGGAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTGCCAGGCACTGCTGTaGCACCCCCTGCGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GQEKGENLSQVNGLLPWTCQALL*HPLRQS
Trigger: GGACTGCCGCAGGGGGTGCCACAGCAGTGCCTGGCA...GGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTCCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GGGAAGGCAAGAGGCGATAGCTGGGGGTCACTTGTCACTAGATGGAAGCTCCTTGGGACAGCTGCCTCGTaGGCCCAGAAGAAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GKARGDSWGSLVTRWKLLGTAAS*AQKKWL
Trigger: AAGCCACTTCTTCTGGGCCCACGAGGCAGCTGTCCC...AAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCCACTGGACCTGCAGTTaGGATACTGCAGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSHWTCS*DTAVNK
Trigger: CTTGTTCACTGCAGTATCCCAACTGCAGGTCCAGTG...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp AGACAGCTGAGGACCAGCCCCCATCCTGCACTGAGGGATGGAGAATTCCGGGAAAAAAGACAATGGCAGTaGAGTGCGTGTGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: RQLRTSPHPALRDGEFREKRQWQ*SACGMG
Trigger: CCCCATCCCACACGCACTGCACTGCCATTGTCTTTT...TTCCCGGAATTCTCCATCCCTCAGTGCAGGATGGGGGCTGGTCCTCAGCTGTCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp ACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGAGCTCCATCTTCCTTGGACAGGGCCTCTGTaGCACTGGGTTCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: TKRQWQCSACGMGELHLPWTGPL*HWVLWT
Trigger: TGTCCACAGAACCCAGTGCCACAGAGGCCCTGTCCA...AGGAAGATGGAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GGAAGGCAAGAGGCGATAGCTGGGGGTCACTTGTCACTAGATGGAAGCTCCTTGAAGCGGGGAGAGCCATaGGAGATGTTAGAGGGACCC +
Preference number: 4 (lower is better)
Translates to: GRQEAIAGGHLSLDGSSLKRGEP*EMLEGP
Trigger: GGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTT...CAAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp ATGGCCTCCTGCCTTGGACCTCGGCTGAAATGTGGCTGGGCTTCATCCGCGGAGTCTGTGGGCCAAAACTaGGTAATGGAGGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: MASCLGPRLKCGWASSAESVGQN*VMEEVE
Trigger: TTCCACTTCCTCCATTACCCAGTTTTGGCCCACAGA...CTCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGCAGGAGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CAA 72 bp CACAGGGGAAGGCAAGAGGCGATAGCTGGGGGTCACTaGTCACTAGATGGAAGCTCCTTGGTCCACACAGTC +
Preference number: 4 (lower is better)
Translates to: HRGRQEAIAGGH*SLDGSSLVHTV
Trigger: GACTGTGTGGACCAAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR TCA 90 bp ACCATGGCAACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGAGCTCTATCTCCATAGCTGCTaGATCCGTGGACAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: TMATKRQWQCSACGMGELYLHSC*IRGQVP
Trigger: GGGAACCTGTCCACGGATTCAGCAGCTATGGAGATA...GAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGTTGCCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR TCA 90 bp GGGGGAGCTCCATCTTCCTTGGGTACATGGGGAGGAGACTCCAGTGACCAGGAGATGGGAATGCCCTTGTaGGTAACAGAGGACACAGAA +
Preference number: 4 (lower is better)
Translates to: GGAPSSLGTWGGDSSDQEMGMPL*VTEDTE
Trigger: TTCTGTGTCCTCTGTTACTCACAAGGGCATTCCCAT...CTCCTGGTCACTGGAGTCTCCTCCCCATGTACCCAAGGAAGATGGAGCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR TCA 90 bp TTGCCTGCACTGGACCTGCAGTTGGGATACTGCAGTGAACAAGACAGAGTCCACCCCCCACTGGGTAGTTaGCGGACAAATTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPALDLQLGYCSEQDRVHPPLGS*RTNCWL
Trigger: CAGCCAGCAATTTGTCCGTCAACTACCCAGTGGGGG...GTGGACTCTGTCTTGTTCACTGCAGTATCCCAACTGCAGGTCCAGTGCAGGCAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR TCA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCACAGCCTTGAAACCTTaGAGGATTCCGCTATCGTTT +
Preference number: 4 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSTALKP*RIPLSF
Trigger: AAACGATAGCGGAATCCTTCAAGGTTTCAAGGCTGT...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp AGCAGGAAACAGCCTCAGAAGTCCGTCACTCTTCAGTACTCCTCCCTTAGAATGCAGGTGTCCCACAGCTaGAAGCTGTTGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SRKQPQKSVTLQYSSLRMQVSHS*KLLPGP
Trigger: GGGCCCTGGCAACAGCTTGCAGCTGTGGGACACCTG...CATTCTAAGGGAGGAGTACTGAAGAGTGACGGACTTCTGAGGCTGTTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp GAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTCGGCTGGTCAGCTCTGTGACTaGCCCTCCTGCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EKGENLSQVNGLLPWTSAGQLCD*PSCIQA
Trigger: GGCCTGGATGCAGGAGGGGCAGTCACAGAGCTGACC...AGCCGAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAACTTTTCCTGGTCACCCAAGGATGTACAAGACCCCCTGTTGTCCAAGAGGCATGCTTCACAGAGATGTaGTCTGGGGCCCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: ELFLVTQGCTRPPVVQEACFTEM*SGAPTG
Trigger: CCCAGTGGGGGCCCCAGACCACATCTCTGTGAAGCA...TGCCTCTTGGACAACAGGGGGTCTTGTACATCCTTGGGTGACCAGGAAAAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GGAGAAGCGGGGAGAGCCATGGGAGATGTTAGAGGGACCCAGAGAAGATGGGGGTCTTGCCAAAACAGATaGCAGAGTGAGCTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GEAGRAMGDVRGTQRRWGSCQNR*QSELRE
Trigger: CTCCCTTAGCTCACTCTGCCATCTGTTTTGGCAAGA...CCCCCATCTTCTCTGGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGACAGGAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCCCCAGAGCTGTGGAATaGGGTCTGGGCACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GQEKGENLSQVNGLLPWTPRAVE*GLGTQG
Trigger: CCCCTGAGTGCCCAGACCCCATTCCACAGCTCTGGG...GGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTCCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTCGGCCACAGAGATGTGGTCTaGGGCCCCCACTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: GKRRESVSSKWPPALDLGHRDVV*GPHWVV
Trigger: AACTACCCAGTGGGGGCCCCAGACCACATCTCTGTG...GCCGAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTCGGCTTGCTTCACAGAGATGTaGTCTGGGGCCCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: EKGENLSQVNGLLPWTSACFTEM*SGAPTG
Trigger: CCCAGTGGGGGCCCCAGACCACATCTCTGTGAAGCA...AGCCGAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTCGGCTCGGCTGAAATGTGGCTaGGCTTCATCCGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EKGENLSQVNGLLPWTSARLKCG*ASSAEG
Trigger: TCCCTCCGCGGATGAAGCCCAGCCACATTTCAGCCG...AGCCGAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GCTCCATCTTCCTTGGGTACATGGGGAGGAGACTCCAGTGACCAGGAGAAGCGGTCACTTGTCACTAGATaGAAGCTCCTTGGTCCACAC +
Preference number: 4 (lower is better)
Translates to: APSSLGTWGGDSSDQEKRSLVTR*KLLGPH
Trigger: GTGTGGACCAAGGAGCTTCCATCTAGTGACAAGTGA...CCGCTTCTCCTGGTCACTGGAGTCTCCTCCCCATGTACCCAAGGAAGATGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GAGGAGCAGCAGGAAACAGCCTCAGAAGTCCGTCACTCTTCAGTACTCCTCCCTGCAAGAGGCGATAGCTaGGGGTCACTTGTCACTAGA +
Preference number: 4 (lower is better)
Translates to: EEQQETASEVRHSSVLLPARGDS*GSLVTR
Trigger: TCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGC...AGGGAGGAGTACTGAAGAGTGACGGACTTCTGAGGCTGTTTCCTGCTGCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp GGAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTCGGCACAGCTGCAAGCTGTTaGCAGGGCCCAGTAGGATCA +
Preference number: 4 (lower is better)
Translates to: GKRRESVSSKWPPALDLGTAASC*QGPVGS
Trigger: TGATCCTACTGGGCCCTGGCAACAGCTTGCAGCTGT...GCCGAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp AACCAAAAGACAATGGCAGTGCAGTGCGTGTGGGATGGGGGAGCTCCATCTTCCGAGGAGTGGTGTCAGTaGTGTTCCTCAGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: NQKTMAVQCVWDGGAPSSEEWCQ*CSSAFL
Trigger: CAGAAATGCTGAGGAACAGCACTGACACCACTCCTC...GGAAGATGGAGCTCCCCCATCCCACACGCACTGCACTGCCATTGTCTTTTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp GAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTCGGCTAGAGCATGGGACAGCTaGCTCGTGGGCCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: EKGENLSQVNGLLPWTSARAWDS*LVGPEE
Trigger: TTCTTCTGGGCCCACGAGGCAGCTGTCCCATGCTCT...AGCCGAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GAACTTTTCCTGGTCACCCAAGGATGTACAAGACCCCCTGTTGTCCAAGAGGCAGCCCAGTCAGAGGAGTaGTGTCAGTGCTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: ELFLVTQGCTRPPVVQEAAQSEE*CQCCSS
Trigger: TGAGGAACAGCACTGACACCACTCCTCTGACTGGGC...TGCCTCTTGGACAACAGGGGGTCTTGTACATCCTTGGGTGACCAGGAAAAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp CTGAACTTTTCCTGGTCACCCAAGGATGTACAAGACCCCCTGTTGTCCAAGAGGGCGCCAAGATTAGGATaGCCAGCAGGCACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LNFSWSPKDVQDPLLSKRAPRLG*PAGTAS
Trigger: TGAAGCAGTGCCTGCTGGCCATCCTAATCTTGGCGC...CCTCTTGGACAACAGGGGGTCTTGTACATCCTTGGGTGACCAGGAAAAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GGAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTCGGCTGCAGACCATCTCGGTaGGGGAGTAATTACGCACGG +
Preference number: 4 (lower is better)
Translates to: GKRRESVSSKWPPALDLGCRPSR*GSNYAR
Trigger: CCGTGCGTAATTACTCCCCCACCGAGATGGTCTGCA...GCCGAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGACAGGAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCACCTCGGCTGAAATGTaGCTGGGCTTCATCCGCGGA +
Preference number: 4 (lower is better)
Translates to: GQEKGENLSQVNGLLPWTTSAEM*LGFIRG
Trigger: TCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGT...GGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTCCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
3UTR CAA 72 bp ATAGCTGGGGGTCACTTGTCACTAGATGGAAGCTCCTaGGTCCACACAGTCCCAAAGAAAGGTCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: IAGGHLSLDGSS*VHTVPKKGLPL
Trigger: CAAGGGCAGACCTTTCTTTGGGACTGTGTGGACCAAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp GGAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTCGGCGGACAAATTGCTGGCTaGCATGGGAATGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GKRRESVSSKWPPALDLGGQIAG*HGNALV
Trigger: CACAAGGGCATTCCCATGGCAGCCAGCAATTTGTCC...GCCGAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGACAGGAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCGAGAGCCCGTGGAGGTaGGGTCTTGCCAAAACAGAT +
Preference number: 4 (lower is better)
Translates to: GQEKGENLSQVNGLLPWTESPWR*GLAKTD
Trigger: ATCTGTTTTGGCAAGACCCCACCTCCACGGGCTCTC...GGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTCCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GAACTTTTCCTGGTCACCCAAGGATGTACAAGACCCCCTGTTGTCCAAGAGGCATCTTCCTTGGGTACATaGGGAGGAGACTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: ELFLVTQGCTRPPVVQEASSLGT*GGDSSD
Trigger: GTCACTGGAGTCTCCTCCCCATGTACCCAAGGAAGA...TGCCTCTTGGACAACAGGGGGTCTTGTACATCCTTGGGTGACCAGGAAAAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR TCA 90 bp GAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTCGGCTATCAGGCAACAGGGATaGGATGCAGACCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: EKGENLSQVNGLLPWTSAIRQQG*DADHLG
Trigger: ACCGAGATGGTCTGCATCTCATCCCTGTTGCCTGAT...AGCCGAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR GCA 90 bp GGAAACAGCCTCAGAAGTCCGTCACTCTTCAGTACTCCTCCCTTAGAATGTCCAGTGGAGGTGGGGTCTTaGCAAAACAGATGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GNSLRSPSLFSTPPLECPVEVGS*QNRWQS
Trigger: ACTCTGCCATCTGTTTTGGCAAGACCCCACCTCCAC...TGGACATTCTAAGGGAGGAGTACTGAAGAGTGACGGACTTCTGAGGCTGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp GGAGACAGCCTTGAAACCTTGAAGGATTCCGCTATCGTTTGTCCATCACATATTGGCATGGCACCACCGTaGTCAGCAGAGCATGGGACA +
Preference number: 4 (lower is better)
Translates to: GDSLETLKDSAIVCPSHIGMAPP*SAEHGT
Trigger: TGTCCCATGCTCTGCTGAGCACGGTGGTGCCATGCC...AATATGTGATGGACAAACGATAGCGGAATCCTTCAAGGTTTCAAGGCTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp GGGAAGGCAAGAGGCGATAGCTGGGGGTCACTTGTCACTAGATGGAAGCTCCTTCCATCACATATTTATTaGCTGCACTGGACCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GKARGDSWGSLVTRWKLLPSHIY*LHWTCS
Trigger: ACTGCAGGTCCAGTGCAGGCAATAAATATGTGATGG...AAGGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTATCGCCTCTTGCCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp TTGCCTGCACTGGACCTGCAGTTGGGATACTGCAGTGAACAAGACAGAGTCCACTCTTGCCAAAACAGATaGCAGAGTGAGCTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPALDLQLGYCSEQDRVHSCQNR*QSELRE
Trigger: CTCCCTTAGCTCACTCTGCCATCTGTTTTGGCAAGA...GTGGACTCTGTCTTGTTCACTGCAGTATCCCAACTGCAGGTCCAGTGCAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GGACAGGAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTGCTCTTGTCCTGTTTaGGTGGCCAGAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GQEKGENLSQVNGLLPWTCSCPV*VARVPS
Trigger: GGAAGGAACTCTGGCCACCCAAACAGGACAAGAGCA...GGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTCCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CCA 90 bp GGAGACAGCCTTGAAACCTTGAAGGATTCCGCTATCGTTTGTCCATCACATATTGCAGTGCAGTGCGTGTaGGATGGGGGAGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: GDSLETLKDSAIVCPSHIAVQCV*DGGAPS
Trigger: AGATGGAGCTCCCCCATCCCACACGCACTGCACTGC...AATATGTGATGGACAAACGATAGCGGAATCCTTCAAGGTTTCAAGGCTGTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp TACAAGACCCCCTGTTGTCCAAGAGGCAAAACTGAAGTCAACCTAACAGCCCATGAGCTCCATCTTCCTTaGGTACATGGGGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: YKTPCCPRGKTEVNLTAHELHLP*VHGEET
Trigger: AGTCTCCTCCCCATGTACCCAAGGAAGATGGAGCTC...ATGGGCTGTTAGGTTGACTTCAGTTTTGCCTCTTGGACAACAGGGGGTCTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp GGAAACAGCCTCAGAAGTCCGTCACTCTTCAGTACTCCTCCCTTAGAATGTCCACACATATTTATTGCCTaGACTGGACCTGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GNSLRSPSLFSTPPLECPHIFIA*TGPAVG
Trigger: CCCAACTGCAGGTCCAGTGCAGGCAATAAATATGTG...TGGACATTCTAAGGGAGGAGTACTGAAGAGTGACGGACTTCTGAGGCTGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp GGAGACAGCCTTGAAACCTTGAAGGATTCCGCTATCGTTTGTCCATCACATATTGAGAGCCCGTGGAGGTaGGGTCTTGCCAAAACAGAT +
Preference number: 4 (lower is better)
Translates to: GDSLETLKDSAIVCPSHIESPWR*GLAKTD
Trigger: ATCTGTTTTGGCAAGACCCCACCTCCACGGGCTCTC...AATATGTGATGGACAAACGATAGCGGAATCCTTCAAGGTTTCAAGGCTGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CCA 90 bp CTGAACTTTTCCTGGTCACCCAAGGATGTACAAGACCCCCTGTTGTCCAAGAGGAGCCTGAACTTTTCCTaGTCACCCAAGGATGTACAA +
Preference number: 4 (lower is better)
Translates to: LNFSWSPKDVQDPLLSKRSLNFS*SPKDVQ
Trigger: TTGTACATCCTTGGGTGACCAGGAAAAGTTCAGGCT...CCTCTTGGACAACAGGGGGTCTTGTACATCCTTGGGTGACCAGGAAAAGTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR GCA 90 bp GGAGACAGCCTTGAAACCTTGAAGGATTCCGCTATCGTTTGTCCATCACATATTGGACAAATTGCTGGCTaGCATGGGAATGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GDSLETLKDSAIVCPSHIGQIAG*HGNALV
Trigger: CACAAGGGCATTCCCATGGCAGCCAGCAATTTGTCC...AATATGTGATGGACAAACGATAGCGGAATCCTTCAAGGTTTCAAGGCTGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
3UTR CAA 72 bp GAAGGATTCCGCTATCGTTTGTCCATCACATATTTATaGCCTGCACTGGACCTGCAGTTGGGATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: EGFRYRLSITYL*PALDLQLGYCS
Trigger: ACTGCAGTATCCCAACTGCAGGTCCAGTGCAGGCAATAAATATGTGATGGACAAACGATAGCGGAATCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS CCA 90 bp GCTGTGCAGGGTGAGGTCATCCCCCTCACGGTCCTCCCTGGGCTCTaGCGTCAGGCCCGGGCTCTTGGCCTTGGACAGGCCCCCATTGGC +
Preference number: 5 (lower is better)
Translates to: AVQGEVIPLTVLPGL*RQARALGLGQAPIG
Trigger: GCCAATGGGGGCCTGTCCAAGGCCAAGAGCCCGGGCCTGACGCCAGAGCCCAGGGAGGACCGTGAGGGGGATGACCTCACCCTGCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp ATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGGTCAGGCCCGGGCTCTaGGCCTTGGACAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: IRGGRKEVAPLARLLGPRVRPGL*ALDRPP
Trigger: TGGGGGCCTGTCCAAGGCCAAGAGCCCGGGCCTGAC...CCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp GAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTGGGTACATGTGGCCCTaGCGGGAGAGGCGGACCGCC +
Preference number: 5 (lower is better)
Translates to: EGGKRWLHLPVCLAPGCSGYMWP*RERRTA
Trigger: GGCGGTCCGCCTCTCCCGCAAGGGCCACATGTACCC...AGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp GGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCCCCGGGCTCTTGGCCTaGGACAGGCCCCCATTGGCT +
Preference number: 5 (lower is better)
Translates to: GGRKEVAPLARLLGPRLLPGLLA*DRPPLA
Trigger: AGCCAATGGGGGCCTGTCCAAGGCCAAGAGCCCGGG...GAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp TGGGCTTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGTCAGGCCCGGGCTCTaGGCCTTGGACAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: WASSAEGGKRWLHLPVCLVRPGL*ALDRPP
Trigger: TGGGGGCCTGTCCAAGGCCAAGAGCCCGGGCCTGAC...CAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAAGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp CGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCACTTGCCCGTCTGCTaGGCCCCAGGCTGCTCTTGT +
Preference number: 5 (lower is better)
Translates to: RGGRKEVAPLARLLGPRLHLPVC*APGCSC
Trigger: ACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTG...CAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS GCA 90 bp CTTCTCTGCTTTAGTGACAAGGTCCCAGCCCACGCTGCCAGGCACTaGTGTGGCACCCCCTGCGGCAGTCCCGGATCCGAGCAACCCCCA +
Preference number: 5 (lower is better)
Translates to: LLCFSDKVPAHAARH*CGTPCGSPGSEQPP
Trigger: TGGGGGTTGCTCGGATCCGGGACTGCCGCAGGGGGTGCCACAGCAGTGCCTGGCAGCGTGGGCTGGGACCTTGTCACTAAAGCAGAGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CAA 90 bp CCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTCACAGCTGCAAGCTGTaGCCAGGGCCCAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: PRREERGGSTCPSAWPQAHSCKL*PGPSRI
Trigger: GATCCTACTGGGCCCTGGCAACAGCTTGCAGCTGTG...AGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCCCCGGGCTCTTGGCCTaGGACAGGCCCCCATTGGCT +
Preference number: 5 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSPGLLA*DRPPLA
Trigger: AGCCAATGGGGGCCTGTCCAAGGCCAAGAGCCCGGG...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp GGAGAAGCGGGGAGAGCCATGGGAGATGTTAGAGGGACCCAGAGAAGATGGGGGGTCAGGCCCGGGCTCTaGGCCTTGGACAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: GEAGRAMGDVRGTQRRWGVRPGL*ALDRPP
Trigger: TGGGGGCCTGTCCAAGGCCAAGAGCCCGGGCCTGAC...CCCCCATCTTCTCTGGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTTCTCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp TTCATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCCACTTGCCCGTCTGCTaGGCCCCAGGCTGCTCTTGT +
Preference number: 5 (lower is better)
Translates to: FIRGGRKEVAPLARLLGPHLPVC*APGCSC
Trigger: ACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTG...GGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGATGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS GCA 90 bp AGCCGAGACACAGGCCTAGGGTCACCACGAACTCCATGGGCATCCTaGAGCCAGAAGCCATGCCGCCAGAGGCAGCTGCTTCTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: SRDTGLGSPRTPWAS*SQKPCRQRQLLLPF
Trigger: GAAGGGGAGAAGCAGCTGCCTCTGGCGGCATGGCTTCTGGCTGCAGGATGCCCATGGAGTTCGTGGTGACCCTAGGCCTGTGTCTCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228463.6
CDS-3UTR CAA 90 bp AGGACCAGCCCCCATCCTGCACTGAGGGATGGAGAATTCCGGGAAGGCTGCCTGCACTTGCCCGTCTGCTaGGCCCCAGGCTGCTCTTGT +
Preference number: 5 (lower is better)
Translates to: RTSPHPALRDGEFREGCLHLPVC*APGCSC
Trigger: ACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTG...CAGGCAGCCTTCCCGGAATTCTCCATCCCTCAGTGCAGGATGGGGGCTGGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CAA 90 bp ATGGCCTCCTGCCTTGGACCTCGGCTGAAATGTGGCTGGGCTTCATCCGCGGAGCACAGCTGCAAGCTGTaGCCAGGGCCCAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: MASCLGPRLKCGWASSAEHSCKL*PGPSRI
Trigger: GATCCTACTGGGCCCTGGCAACAGCTTGCAGCTGTG...CTCCGCGGATGAAGCCCAGCCACATTTCAGCCGAGGTCCAAGGCAGGAGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS GCA 90 bp GAGCATGGGACAGCTGCCTCGTGGGCCCAGAAGAAGTGGCTTCTCTaGTTTAGTGACAAGGTCCCAGCCCACGCTGCCAGGCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: EHGTAASWAQKKWLL*FSDKVPAHAARHCC
Trigger: ACAGCAGTGCCTGGCAGCGTGGGCTGGGACCTTGTCACTAAAGCAGAGAAGCCACTTCTTCTGGGCCCACGAGGCAGCTGTCCCATGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CAA 90 bp GAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCTGCGTGGAGGTGGGGTCTaGCCAAAACAGATGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ERGGSTCPSAWPQAALVLRGGGV*PKQMAE
Trigger: CTCTGCCATCTGTTTTGGCAAGACCCCACCTCCACG...CAGGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp ATCCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGATAGCTGGGGGTCACTaGTCACTAGATGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: IRGGRKEVAPLARLLGPRIAGGH*SLDGSS
Trigger: GGAGCTTCCATCTAGTGACAAGTGACCCCCAGCTAT...CCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS CCA 90 bp GGCCAGCAGGCACTGCTTCACAGAGATGTGGTCTGGGGCCCCCACTaGGTAGTTGACGGACAAATTGCTGGCTGCCATGGGAATGCCCTT +
Preference number: 5 (lower is better)
Translates to: GQQALLHRDVVWGPH*VVDGQIAGCHGNAL
Trigger: AAGGGCATTCCCATGGCAGCCAGCAATTTGTCCGTCAACTACCCAGTGGGGGCCCCAGACCACATCTCTGTGAAGCAGTGCCTGCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCCTGCTCTTGTCCTGTTaGGGTGGCCAGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSLLLSC*GGQSSF
Trigger: GAAGGAACTCTGGCCACCCAAACAGGACAAGAGCAG...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp GGAGAAGCGGGGAGAGCCATGGGAGATGTTAGAGGGACCCAGAGAAGATGGGGGAAGAAAGGTCTGCCCTaGGGCCCACGAAACCCATCC +
Preference number: 5 (lower is better)
Translates to: GEAGRAMGDVRGTQRRWGKKGLP*GPRNPS
Trigger: GGATGGGTTTCGTGGGCCCAAGGGCAGACCTTTCTT...CCCCCATCTTCTCTGGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS GCA 90 bp CTAGGGTCACCACGAACTCCATGGGCATCCTGCAGCCAGAAGCCATaGCGCCAGAGGCAGCTGCTTCTCCCCTTCAAGCCTCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: LGSPRTPWASCSQKP*RQRQLLLPFKPQFS
Trigger: AGAAAACTGAGGCTTGAAGGGGAGAAGCAGCTGCCTCTGGCGGCATGGCTTCTGGCTGCAGGATGCCCATGGAGTTCGTGGTGACCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228463.6
CDS GCA 90 bp CTTTCTCGGCTTCATCTGCCCAGGTGTCCCACAGCTGCAAGCTGTTaGCAGGGCCCAGTAGGATCAGCAACAGGAGGAGTTGCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: LSRLHLPRCPTAASC*QGPVGSATGGVAEA
Trigger: TGCCTCTGCAACTCCTCCTGTTGCTGATCCTACTGGGCCCTGGCAACAGCTTGCAGCTGTGGGACACCTGGGCAGATGAAGCCGAGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp CCGCGGAGGGAGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTATGAACAGACCTCTTTaGGTAGTAGGTTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: PRREERGGSTCPSAWPQAMNRPL*VVGSMD
Trigger: GTCCATGGAACCTACTACCAAAAGAGGTCTGTTCAT...AGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCTCCCTCCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp GGAGAAGCGGGGAGAGCCATGGGAGATGTTAGAGGGACCCAGAGAAGATGGGGGCTGCTCTTGTCCTGTTaGGGTGGCCAGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GEAGRAMGDVRGTQRRWGLLLSC*GGQSSF
Trigger: GAAGGAACTCTGGCCACCCAAACAGGACAAGAGCAG...CCCCCATCTTCTCTGGGTCCCTCTAACATCTCCCATGGCTCTCCCCGCTTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp AGGAAAGAGGTGGCTCCACTTGCCCGTCTGCTTGGCCCCAGGCTGCTCTTGTCCCTAGATGGAAGCTCCTaGGTCCACACAGTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: RKEVAPLARLLGPRLLLSLDGSS*VHTVPK
Trigger: CTTTGGGACTGTGTGGACCAAGGAGCTTCCATCTAG...GGACAAGAGCAGCCTGGGGCCAAGCAGACGGGCAAGTGGAGCCACCTCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS CCA 90 bp GCTCCGTTTCTGGCAGGAAATCATAATCTAGGTACTCATATTCGGTaGCCTGTCTCCGGTCCCGGGCAAGCAGGGGACCCAAGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: APFLAGNHNLGTHIR*PVSGPGQAGDPRLS
Trigger: AGAAAGCCTTGGGTCCCCTGCTTGCCCGGGACCGGAGACAGGCCACCGAATATGAGTACCTAGATTATGATTTCCTGCCAGAAACGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS CCA 90 bp GTTGCAGAGGCATGGCACCAGCCATCTTATCTCCTTCTAGACCACTaGCCCCCACTGCCATCTTCCTGTTCAAGTTCAGCAAAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: VAEAWHQPSYLLLDH*PPLPSSCSSSAKEA
Trigger: GGCTTCCTTTGCTGAACTTGAACAGGAAGATGGCAGTGGGGGCCAGTGGTCTAGAAGGAGATAAGATGGCTGGTGCCATGCCTCTGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228463.6
CDS-3UTR CAA 90 bp GGAAAAAGGAGAGAATCTGTCTCAAGTAAATGGCCTCCTGCCTTGGACCTCGGCCGTGGAGGTGGGGTCTaGCCAAAACAGATGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GKRRESVSSKWPPALDLGRGGGV*PKQMAE
Trigger: CTCTGCCATCTGTTTTGGCAAGACCCCACCTCCACG...GCCGAGGTCCAAGGCAGGAGGCCATTTACTTGAGACAGATTCTCTCCTTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388962.4
ENST00000550948.2
CDS-3UTR CAA 90 bp GCTCCATCTTCCTTGGGTACATGGGGAGGAGACTCCAGTGACCAGGAGAAGCGGTCCATCACATATTTATaGCCTGCACTGGACCTGCAG +
Preference number: 5 (lower is better)
Translates to: APSSLGTWGGDSSDQEKRSITYL*PALDLQ
Trigger: CTGCAGGTCCAGTGCAGGCAATAAATATGTGATGGA...CCGCTTCTCCTGGTCACTGGAGTCTCCTCCCCATGTACCCAAGGAAGATGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CAA 90 bp GCTCCTTGGTCCACACAGTCCCAAAGAAAGGTCTGCCCTTGGGCCCACGAAACCATGAACAGACCTCTTTaGGTAGTAGGTTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: APWSTQSQRKVCPWAHETMNRPL*VVGSMD
Trigger: GTCCATGGAACCTACTACCAAAAGAGGTCTGTTCAT...GGTTTCGTGGGCCCAAGGGCAGACCTTTCTTTGGGACTGTGTGGACCAAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CAA 90 bp AGCAGGAAACAGCCTCAGAAGTCCGTCACTCTTCAGTACTCCTCCCTTAGAATGGGAGCTCCATCTTCCTaGGGTACATGGGGAGGAGAC +
Preference number: 5 (lower is better)
Translates to: SRKQPQKSVTLQYSSLRMGAPSS*GTWGGD
Trigger: GTCTCCTCCCCATGTACCCAAGGAAGATGGAGCTCC...CATTCTAAGGGAGGAGTACTGAAGAGTGACGGACTTCTGAGGCTGTTTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS-3UTR CAA 90 bp AGCCTTGAAACCTTGAAGGATTCCGCTATCGTTTGTCCATCACATATTTATTGCCCCGGGCTCTTGGCCTaGGACAGGCCCCCATTGGCT +
Preference number: 5 (lower is better)
Translates to: SLETLKDSAIVCPSHIYCPGLLA*DRPPLA
Trigger: AGCCAATGGGGGCCTGTCCAAGGCCAAGAGCCCGGG...GCAATAAATATGTGATGGACAAACGATAGCGGAATCCTTCAAGGTTTCAAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS CAA 72 bp TCCCTGGGCTCTGGCGTCAGGCCCGGGCTCTTGGCCTaGGACAGGCCCCCATTGGCTGTGGCAGAGGGCCCC +
Preference number: 6 (lower is better)
Translates to: SLGSGVRPGLLA*DRPPLAVAEGP
Trigger: GGGGCCCTCTGCCACAGCCAATGGGGGCCTGTCCAAGGCCAAGAGCCCGGGCCTGACGCCAGAGCCCAGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS GCA 72 bp TTTAGTGACAAGGTCCCAGCCCACGCTGCCAGGCACTaGTGTGGCACCCCCTGCGGCAGTCCCGGATCCGAG +
Preference number: 6 (lower is better)
Translates to: FSDKVPAHAARH*CGTPCGSPGSE
Trigger: CTCGGATCCGGGACTGCCGCAGGGGGTGCCACAGCAGTGCCTGGCAGCGTGGGCTGGGACCTTGTCACTAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS CCA 72 bp AGCCGAGACACAGGCCTAGGGTCACCACGAACTCCATaGGCATCCTGCAGCCAGAAGCCATGCCGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: SRDTGLGSPRTP*ASCSQKPCRQR
Trigger: CCTCTGGCGGCATGGCTTCTGGCTGCAGGATGCCCATGGAGTTCGTGGTGACCCTAGGCCTGTGTCTCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228463.6
CDS GCA 72 bp CCACGAACTCCATGGGCATCCTGCAGCCAGAAGCCATaGCGCCAGAGGCAGCTGCTTCTCCCCTTCAAGCCT +
Preference number: 6 (lower is better)
Translates to: PRTPWASCSQKP*RQRQLLLPFKP
Trigger: AGGCTTGAAGGGGAGAAGCAGCTGCCTCTGGCGGCATGGCTTCTGGCTGCAGGATGCCCATGGAGTTCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228463.6
CDS GCA 72 bp GACTGCCCCTCCTGCATCCAGGCCAGTAGAACGCCTTaGAGCAGGCTCCACAGTGGTAGACTCAGGGGTTCC +
Preference number: 6 (lower is better)
Translates to: DCPSCIQASRTP*SRLHSGRLRGS
Trigger: GGAACCCCTGAGTCTACCACTGTGGAGCCTGCTGCAAGGCGTTCTACTGGCCTGGATGCAGGAGGGGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS CCA 72 bp TTGCAGAGGCATGGCACCACCGTGCTCAGCAGAGCATaGGACAGCTGCCTCGTGGGCCCAGAAGAAGTGGCT +
Preference number: 6 (lower is better)
Translates to: LQRHGTTVLSRA*DSCLVGPEEVA
Trigger: AGCCACTTCTTCTGGGCCCACGAGGCAGCTGTCCCATGCTCTGCTGAGCACGGTGGTGCCATGCCTCTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS GCA 72 bp ACAGCTGCCTCGTGGGCCCAGAAGAAGTGGCTTCTCTaGTTTAGTGACAAGGTCCCAGCCCACGCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: TAASWAQKKWLL*FSDKVPAHAAR
Trigger: CCTGGCAGCGTGGGCTGGGACCTTGTCACTAAAGCAGAGAAGCCACTTCTTCTGGGCCCACGAGGCAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS GCA 72 bp CATGGCACCACCGTGCTCAGCAGAGCATGGGACAGCTaGCTCGTGGGCCCAGAAGAAGTGGCTTCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: HGTTVLSRAWDS*LVGPEEVASLL
Trigger: AAGCAGAGAAGCCACTTCTTCTGGGCCCACGAGGCAGCTGTCCCATGCTCTGCTGAGCACGGTGGTGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550948.2
CDS CCA 72 bp GCACTGCTTCACAGAGATGTGGTCTGGGGCCCCCACTaGGTAGTTGACGGACAAATTGCTGGCTGCCATGGG +
Preference number: 6 (lower is better)
Translates to: ALLHRDVVWGPH*VVDGQIAGCHG
Trigger: CCCATGGCAGCCAGCAATTTGTCCGTCAACTACCCAGTGGGGGCCCCAGACCACATCTCTGTGAAGCAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS CCA 72 bp GGAGAGCCCGTGGAGGTGGGGTCTTGCCAAAACAGATaGCAGAGTGAGCTAAGGGAGGAAGCTGTGCAGGGT +
Preference number: 6 (lower is better)
Translates to: GEPVEVGSCQNR*QSELREEAVQG
Trigger: ACCCTGCACAGCTTCCTCCCTTAGCTCACTCTGCCATCTGTTTTGGCAAGACCCCACCTCCACGGGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS TCA 72 bp TCACAGAGATGTGGTCTGGGGCCCCCACTGGGTAGTTaGCGGACAAATTGCTGGCTGCCATGGGAATGCCCT +
Preference number: 6 (lower is better)
Translates to: SQRCGLGPPLGS*RTNCWLPWECP
Trigger: AGGGCATTCCCATGGCAGCCAGCAATTTGTCCGTCAACTACCCAGTGGGGGCCCCAGACCACATCTCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS GCA 72 bp CTTCATCTGCCCAGGTGTCCCACAGCTGCAAGCTGTTaGCAGGGCCCAGTAGGATCAGCAACAGGAGGAGTT +
Preference number: 6 (lower is better)
Translates to: LHLPRCPTAASC*QGPVGSATGGV
Trigger: AACTCCTCCTGTTGCTGATCCTACTGGGCCCTGGCAACAGCTTGCAGCTGTGGGACACCTGGGCAGATGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS GCA 72 bp CAGGGGTTCCAGGCCCAGTCAGAGGAGTGGTGTCAGTaGTGTTCCTCAGCATTTCTGGAGGCTCCGTTTCTG +
Preference number: 6 (lower is better)
Translates to: QGFQAQSEEWCQ*CSSAFLEAPFL
Trigger: CAGAAACGGAGCCTCCAGAAATGCTGAGGAACAGCACTGACACCACTCCTCTGACTGGGCCTGGAACCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS CCA 72 bp GATGGCCAGCAGGCACTGCTTCACAGAGATGTGGTCTaGGGCCCCCACTGGGTAGTTGACGGACAAATTGCT +
Preference number: 6 (lower is better)
Translates to: DGQQALLHRDVV*GPHWVVDGQIA
Trigger: AGCAATTTGTCCGTCAACTACCCAGTGGGGGCCCCAGACCACATCTCTGTGAAGCAGTGCCTGCTGGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS GCA 72 bp GGCCCCCACTGGGTAGTTGACGGACAAATTGCTGGCTaGCATGGGAATGCCCTTGTGAGTAACAGAGGACAC +
Preference number: 6 (lower is better)
Translates to: GPHWVVDGQIAG*HGNALVSNRGH
Trigger: GTGTCCTCTGTTACTCACAAGGGCATTCCCATGGCAGCCAGCAATTTGTCCGTCAACTACCCAGTGGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS CCA 72 bp CTGGCAGGAAATCATAATCTAGGTACTCATATTCGGTaGCCTGTCTCCGGTCCCGGGCAAGCAGGGGACCCA +
Preference number: 6 (lower is better)
Translates to: LAGNHNLGTHIR*PVSGPGQAGDP
Trigger: TGGGTCCCCTGCTTGCCCGGGACCGGAGACAGGCCACCGAATATGAGTACCTAGATTATGATTTCCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS CCA 72 bp CATCAGGCAACAGGGATGAGATGCAGACCATCTCGGTaGGGGAGTAATTACGCACGGGGTACATGTGGCCCT +
Preference number: 6 (lower is better)
Translates to: HQATGMRCRPSR*GSNYARGTCGP
Trigger: AGGGCCACATGTACCCCGTGCGTAATTACTCCCCCACCGAGATGGTCTGCATCTCATCCCTGTTGCCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS CCA 72 bp GCATGGCACCAGCCATCTTATCTCCTTCTAGACCACTaGCCCCCACTGCCATCTTCCTGTTCAAGTTCAGCA +
Preference number: 6 (lower is better)
Translates to: AWHQPSYLLLDH*PPLPSSCSSSA
Trigger: TGCTGAACTTGAACAGGAAGATGGCAGTGGGGGCCAGTGGTCTAGAAGGAGATAAGATGGCTGGTGCCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228463.6
CDS CAA 72 bp ACAGAGGACACAGAAAAGGGTATGAACAGACCTCTTTaGGTAGTAGGTTCCATGGACAGGGCCTCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: TEDTEKGMNRPL*VVGSMDRASVA
Trigger: TGCCACAGAGGCCCTGTCCATGGAACCTACTACCAAAAGAGGTCTGTTCATACCCTTTTCTGTGTCCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2
CDS TCA 72 bp ACGGACAAATTGCTGGCTGCCATGGGAATGCCCTTGTaGGTAACAGAGGACACAGAAAAGGGTATGAACAGA +
Preference number: 6 (lower is better)
Translates to: TDKLLAAMGMPL*VTEDTEKGMNR
Trigger: TCTGTTCATACCCTTTTCTGTGTCCTCTGTTACTCACAAGGGCATTCCCATGGCAGCCAGCAATTTGTCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228463.6
ENST00000388962.4
ENST00000550948.2