Pregenerated sensors for SELENOW (Homo sapiens)
Ensembl gene IDs: ENSG00000178980Ensembl transcript IDs: ENST00000509570.6, ENST00000593892.5, ENST00000595509.1, ENST00000595615.1, ENST00000598083.1, ENST00000598273.5, ENST00000598956.5, ENST00000599302.1, ENST00000599590.5, ENST00000599874.5, ENST00000601048.6, ENST00000602163.1, ENST00000612212.4
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGCCTGGGTCAAGGTCCCTaGACTCTGCCTTCAGGGCGC | + |
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Preference number: 2 (lower is better) Translates to: HTHRLSRSEAKTGGVNLCLGQGP*TLPSGR Trigger: GCGCCCTGAAGGCAGAGTCCAGGGACCTTGACCCAG...GCAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000509570.6 ENST00000599874.5 ENST00000601048.6 ENST00000612212.4 |
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| 3UTR-3UTR CCA 90 bp | CACATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTCTGGGTCAAGGTCCCTaGACTCTGCCTTCAGGGCGC | + |
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Preference number: 2 (lower is better) Translates to: HIHTDSPAQRQRPGASISLGQGP*TLPSGR Trigger: GCGCCCTGAAGGCAGAGTCCAGGGACCTTGACCCAG...AGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000509570.6 ENST00000599874.5 ENST00000601048.6 ENST00000612212.4 |
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| 3UTR-3UTR CCA 90 bp | GACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGAGCTGGGTCAAGGTCCCTaGACTCTGCCTTCAGGGCGC | + |
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Preference number: 2 (lower is better) Translates to: DQVSTRLFSPSYHEASAELGQGP*TLPSGR Trigger: GCGCCCTGAAGGCAGAGTCCAGGGACCTTGACCCAG...CTCAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000509570.6 ENST00000599874.5 ENST00000601048.6 ENST00000612212.4 |
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| 3UTR-3UTR CCA 90 bp | TCAGTTGTTGTCCTCCACCAACCGGGTCTAACTTTATCCCGCTCGCTCTGGGGAAGAAGATCCAAAGGGTaGTGTCCCTGTCTAGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SVVVLHQPGLTLSRSLWGRRSKG*CPCLVG Trigger: GCCCACTAGACAGGGACACCACCCTTTGGATCTTCT...TCCCCAGAGCGAGCGGGATAAAGTTAGACCCGGTTGGTGGAGGACAACAACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595615.1 |
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| 3UTR-3UTR GCA 90 bp | GACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGAGAAGGTCCCTGGACTCTaGCTTCAGGGCGCATTAGCC | + |
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Preference number: 2 (lower is better) Translates to: DQVSTRLFSPSYHEASAEKVPGL*LQGALA Trigger: GGCTAATGCGCCCTGAAGGCAGAGTCCAGGGACCTT...CTCAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599874.5 |
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| CDS-3UTR TCA 90 bp | AGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGCCTTCAGGGCGGCTGCCACATCCGCTaGGGAGCGGACGCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RLSRSEAKTGGVNLCLQGGCHIR*GADARA Trigger: GGCCCGGGCGTCCGCTCCTCAGCGGATGTGGCAGCC...GCCCTGAAGGCAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593892.5 |
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| CDS-3UTR TCA 90 bp | CATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGCGGCTGCCACATCCGCTaGGGAGCGGACGCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: HTHRLSRSEAKTGGVNLCGCHIR*GADARA Trigger: GGCCCGGGCGTCCGCTCCTCAGCGGATGTGGCAGCC...GCAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000509570.6 ENST00000593892.5 ENST00000599874.5 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR TCA 90 bp | CACATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGGCTGCCACATCCGCTaGGGAGCGGACGCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: HIHTDSPAQRQRPGASISGCHIR*GADARA Trigger: GGCCCGGGCGTCCGCTCCTCAGCGGATGTGGCAGCC...AGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000509570.6 ENST00000593892.5 ENST00000599874.5 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR TCA 90 bp | TCAGTTGTTGTCCTCCACCAACCGGGTCTAACTTTATCCCGCTCGCTCTGGGGAGGCTGCCACATCCGCTaGGGAGCGGACGCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SVVVLHQPGLTLSRSLWGGCHIR*GADARA Trigger: GGCCCGGGCGTCCGCTCCTCAGCGGATGTGGCAGCC...TCCCCAGAGCGAGCGGGATAAAGTTAGACCCGGTTGGTGGAGGACAACAACTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595615.1 |
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| CDS-3UTR GCA 90 bp | CATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGCCCTGGCGCCAACCAATaGCAGGGAGGGGCGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHRLSRSEAKTGGVNLCPGANQ*QGGAVG Trigger: GCCCACCGCCCCTCCCTGGCATTGGTTGGCGCCAGG...GCAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509570.6 ENST00000612212.4 |
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| CDS-3UTR TCA 90 bp | CATGGGGCAGGGAGAAGATCCAAAGGGTGGTGTCCCTGTCTAGTGGGCCCCCTCGAGCCAAGGCGGCTTTaGTGGCGGCCACCAACTTCA | + |
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Preference number: 4 (lower is better) Translates to: HGAGRRSKGWCPCLVGPLEPRRL*WRPPTS Trigger: TGAAGTTGGTGGCCGCCATCAAAGCCGCCTTGGCTC...GAGGGGGCCCACTAGACAGGGACACCACCCTTTGGATCTTCTCCCTGCCCCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000595615.1 |
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| CDS-3UTR CCA 90 bp | CATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGCAGCCTCGGCTTCCCCTaGCGCCAACCAATGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HTHRLSRSEAKTGGVNLCSLGFP*RQPMPG Trigger: CCCTGGCATTGGTTGGCGCCAGGGGAAGCCGAGGCT...GCAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509570.6 ENST00000612212.4 |
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| CDS-3UTR TCA 90 bp | CACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGCCTTCGAGCCAAGGCGGCTTTaGTGGCGGCCACCAACTTCA | + |
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Preference number: 4 (lower is better) Translates to: HTDSPAQRQRPGASISAFEPRRL*WRPPTS Trigger: TGAAGTTGGTGGCCGCCATCAAAGCCGCCTTGGCTC...GAAGGCAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593892.5 |
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| CDS-3UTR GCA 90 bp | CACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGCCTTCGGGGGCGTCAATCTCTaGCTTCAGGGCGCATTAGCC | + |
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Preference number: 4 (lower is better) Translates to: HTDSPAQRQRPGASISAFGGVNL*LQGALA Trigger: GGCTAATGCGCCCTGAAGGCAGAGATTGACGCCCCC...GAAGGCAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000593892.5 |
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| CDS-3UTR GCA 90 bp | GTTGTTGTCCTCCACCAACCGGGTCTAACTTTATCCCGCTCGCTCTGGGGACACGGGCCCCCTCACCTCTaGCTTCAGGGCGCATTAGCC | + |
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Preference number: 4 (lower is better) Translates to: VVVLHQPGLTLSRSLWGHGPPHL*LQGALA Trigger: GGCTAATGCGCCCTGAAGGCAGAGGTGAGGGGGCCC...GTGTCCCCAGAGCGAGCGGGATAAAGTTAGACCCGGTTGGTGGAGGACAACAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000595615.1 |
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| CDS-3UTR CCA 90 bp | CACATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTAGCCTCGGCTTCCCCTaGCGCCAACCAATGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HIHTDSPAQRQRPGASISSLGFP*RQPMPG Trigger: CCCTGGCATTGGTTGGCGCCAGGGGAAGCCGAGGCT...AGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509570.6 ENST00000612212.4 |
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| CDS-3UTR TCA 90 bp | AAGACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGGGCTGCCACATCCGCTaGGGAGCGGACGCCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KTRCPQDFSVLPIMKRLLGCHIR*GADARA Trigger: GGCCCGGGCGTCCGCTCCTCAGCGGATGTGGCAGCC...CAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000509570.6 ENST00000599874.5 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR TCA 90 bp | CATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGCGAGCCAAGGCGGCTTTaGTGGCGGCCACCAACTTCA | + |
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Preference number: 4 (lower is better) Translates to: HTHRLSRSEAKTGGVNLCEPRRL*WRPPTS Trigger: TGAAGTTGGTGGCCGCCATCAAAGCCGCCTTGGCTC...GCAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000509570.6 ENST00000593892.5 ENST00000599874.5 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR CCA 90 bp | CACATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTCCTGCGCAGAAAGGATaGAGCCTCGGCTTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: HIHTDSPAQRQRPGASISPAQKG*SLGFPW Trigger: CCAGGGGAAGCCGAGGCTCCATCCTTTCTGCGCAGG...AGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000509570.6 ENST00000612212.4 |
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| CDS-3UTR TCA 90 bp | ACATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGGAGCCAAGGCGGCTTTaGTGGCGGCCACCAACTTCA | + |
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Preference number: 4 (lower is better) Translates to: TYTQTLPLRGKDRGRQSLEPRRL*WRPPTS Trigger: TGAAGTTGGTGGCCGCCATCAAAGCCGCCTTGGCTC...CAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000509570.6 ENST00000593892.5 ENST00000599874.5 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR GCA 90 bp | GACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGAGCCTGGCGCCAACCAATaGCAGGGAGGGGCGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: DQVSTRLFSPSYHEASAEPGANQ*QGGAVG Trigger: GCCCACCGCCCCTCCCTGGCATTGGTTGGCGCCAGG...CTCAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509570.6 ENST00000612212.4 |
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| CDS-3UTR CCA 90 bp | GCATGGGGCAGGGAGAAGATCCAAAGGGTGGTGTCCCTGTCTAGTGGGCCCCCTAGAAGATCCAAAGGGTaGTGTCCCTGTCTAGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: AWGREKIQRVVSLSSGPPRRSKG*CPCLVG Trigger: GCCCACTAGACAGGGACACCACCCTTTGGATCTTCT...AGGGGGCCCACTAGACAGGGACACCACCCTTTGGATCTTCTCCCTGCCCCATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000595615.1 |
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| CDS-3UTR GCA 90 bp | CACATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTAAGGTCCCTGGACTCTaGCTTCAGGGCGCATTAGCC | + |
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Preference number: 4 (lower is better) Translates to: HIHTDSPAQRQRPGASISKVPGL*LQGALA Trigger: GGCTAATGCGCCCTGAAGGCAGAGTCCAGGGACCTT...AGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000509570.6 ENST00000599874.5 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR GCA 90 bp | ACATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGAAGGTCCCTGGACTCTaGCTTCAGGGCGCATTAGCC | + |
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Preference number: 4 (lower is better) Translates to: TYTQTLPLRGKDRGRQSLKVPGL*LQGALA Trigger: GGCTAATGCGCCCTGAAGGCAGAGTCCAGGGACCTT...CAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000509570.6 ENST00000599874.5 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR GCA 90 bp | GACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGAGCTAGGTCTGCGCGAGTaGGGCGGGAACCTGCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: DQVSTRLFSPSYHEASAELGLRE*GGNLRR Trigger: TCTGCGCAGGTTCCCGCCGCACTCGCGCAGACCTAG...CTCAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000509570.6 ENST00000599874.5 ENST00000612212.4 |
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| CDS-3UTR GCA 90 bp | ACATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGCCGACACAGTGGCTGTaGTCAAGTCTTTCTCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: TYTQTLPLRGKDRGRQSLPTQWL*SSLSPH Trigger: ATGGGGAGAAAGACTTGAGCACAGCCACTGTGTCGG...CAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000599874.5 |
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| CDS-3UTR CCA 90 bp | GACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGAGCCTGCGCAGAAAGGATaGAGCCTCGGCTTCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: DQVSTRLFSPSYHEASAEPAQKG*SLGFPW Trigger: CCAGGGGAAGCCGAGGCTCCATCCTTTCTGCGCAGG...CTCAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509570.6 ENST00000612212.4 |
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| CDS-3UTR CCA 90 bp | GTTGTTGTCCTCCACCAACCGGGTCTAACTTTATCCCGCTCGCTCTGGGGACACCAAGGAGTCAGAGCATaGGGCAGGGAGAAGATCCAA | + |
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Preference number: 4 (lower is better) Translates to: VVVLHQPGLTLSRSLWGHQGVRA*GREKIQ Trigger: TTGGATCTTCTCCCTGCCCCATGCTCTGACTCCTTG...GTGTCCCCAGAGCGAGCGGGATAAAGTTAGACCCGGTTGGTGGAGGACAACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595615.1 |
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| CDS-3UTR TCA 90 bp | GACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGAGGAGCCAAGGCGGCTTTaGTGGCGGCCACCAACTTCA | + |
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Preference number: 4 (lower is better) Translates to: DQVSTRLFSPSYHEASAEEPRRL*WRPPTS Trigger: TGAAGTTGGTGGCCGCCATCAAAGCCGCCTTGGCTC...CTCAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000509570.6 ENST00000599874.5 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR GCA 90 bp | GACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGAGAGTGCGGCGGGAACCTaGGCAGAAAGGATGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: DQVSTRLFSPSYHEASAESAAGT*AERMEP Trigger: AGGCTCCATCCTTTCTGCGCAGGTTCCCGCCGCACT...CTCAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509570.6 ENST00000612212.4 |
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| CDS-3UTR CCA 90 bp | AAGACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGCTGGGTCAAGGTCCCTaGACTCTGCCTTCAGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: KTRCPQDFSVLPIMKRLLLGQGP*TLPSGR Trigger: GCGCCCTGAAGGCAGAGTCCAGGGACCTTGACCCAG...CAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000509570.6 ENST00000599874.5 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR GCA 90 bp | AAGACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGAGTGCGGCGGGAACCTaGGCAGAAAGGATGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: KTRCPQDFSVLPIMKRLLSAAGT*AERMEP Trigger: AGGCTCCATCCTTTCTGCGCAGGTTCCCGCCGCACT...CAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509570.6 ENST00000612212.4 |
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| CDS-3UTR GCA 90 bp | ACATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGAACGGTTGCAAACGTTaGCACAATCAGAAACCCACC | + |
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Preference number: 4 (lower is better) Translates to: TYTQTLPLRGKDRGRQSLNGCKR*HNQKPT Trigger: GGTGGGTTTCTGATTGTGGCAACGTTTGCAACCGTT...CAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000509570.6 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR CCA 90 bp | CACATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTCAACTGGGGAAGACATaGGGTATGCAAAGAGATATG | + |
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Preference number: 4 (lower is better) Translates to: HIHTDSPAQRQRPGASISQLGKT*GMQRDM Trigger: CATATCTCTTTGCATACCCCATGTCTTCCCCAGTTG...AGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000509570.6 ENST00000593892.5 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR CCA 90 bp | ACATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGCAACTGGGGAAGACATaGGGTATGCAAAGAGATATG | + |
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Preference number: 4 (lower is better) Translates to: TYTQTLPLRGKDRGRQSLQLGKT*GMQRDM Trigger: CATATCTCTTTGCATACCCCATGTCTTCCCCAGTTG...CAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000509570.6 ENST00000593892.5 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR CCA 90 bp | GACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGAGAACGGACCGACACAGTaGCTGTGCTCAAGTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: DQVSTRLFSPSYHEASAENGPTQ*LCSSLS Trigger: AGAAAGACTTGAGCACAGCCACTGTGTCGGTCCGTT...CTCAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599874.5 |
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| CDS-3UTR GCA 90 bp | GACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGAGAACGGTTGCAAACGTTaGCACAATCAGAAACCCACC | + |
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Preference number: 4 (lower is better) Translates to: DQVSTRLFSPSYHEASAENGCKR*HNQKPT Trigger: GGTGGGTTTCTGATTGTGGCAACGTTTGCAACCGTT...CTCAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000509570.6 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR GCA 90 bp | AAGACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGAACGGTTGCAAACGTTaGCACAATCAGAAACCCACC | + |
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Preference number: 4 (lower is better) Translates to: KTRCPQDFSVLPIMKRLLNGCKR*HNQKPT Trigger: GGTGGGTTTCTGATTGTGGCAACGTTTGCAACCGTT...CAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000509570.6 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR CCA 90 bp | AAGACCAGGTGTCCACAAGACTTTTCAGTCCTTCCTATCATGAAGCGTCTGCTGCAACTGGGGAAGACATaGGGTATGCAAAGAGATATG | + |
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Preference number: 4 (lower is better) Translates to: KTRCPQDFSVLPIMKRLLQLGKT*GMQRDM Trigger: CATATCTCTTTGCATACCCCATGTCTTCCCCAGTTG...CAGCAGACGCTTCATGATAGGAAGGACTGAAAAGTCTTGTGGACACCTGGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000509570.6 ENST00000601048.6 ENST00000612212.4 |
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| CDS CCA 90 bp | CGCGCTAGGTCTGCGCGAGTGCGGCGGGAACCTGCGCAGAAAGGATaGAGCCTCGGCTTCCCCTGGCGCCAACCAATGCCAGGGAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: RARSARVRREPAQKG*SLGFPWRQPMPGRG Trigger: GCCCCTCCCTGGCATTGGTTGGCGCCAGGGGAAGCCGAGGCTCCATCCTTTCTGCGCAGGTTCCCGCCGCACTCGCGCAGACCTAGCGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509570.6 ENST00000612212.4 |
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| CDS GCA 90 bp | CGGGCCACACTAACCTCCCACCTGGACGCGCTAGGTCTGCGCGAGTaGGGCGGGAACCTGCGCAGAAAGGATGGAGCCTCGGCTTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: RATLTSHLDALGLRE*GGNLRRKDGASASP Trigger: AGGGGAAGCCGAGGCTCCATCCTTTCTGCGCAGGTTCCCGCCGCACTCGCGCAGACCTAGCGCGTCCAGGTGGGAGGTTAGTGTGGCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509570.6 ENST00000612212.4 |
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| CDS GCA 90 bp | CCCCCTGCAGTGCCATCCAGGCCTAACGGACCGACACAGTGGCTGTaGTCAAGTCTTTCTCCCCATCCCAAGACTCACGATGTCCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: PPAVPSRPNGPTQWL*SSLSPHPKTHDVQA Trigger: CGCCTGGACATCGTGAGTCTTGGGATGGGGAGAAAGACTTGAGCACAGCCACTGTGTCGGTCCGTTAGGCCTGGATGGCACTGCAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000598083.1 ENST00000598956.5 ENST00000599874.5 |
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| CDS-3UTR CAA 90 bp | ACATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTGTCTCTTGGCTTCCCCTaGAGAAGGATGCCTGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: TYTQTLPLRGKDRGRQSLSLGFP*RRMPEA Trigger: CGCCTCAGGCATCCTTCTCAAGGGGAAGCCAAGAGA...CAGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000509570.6 ENST00000601048.6 ENST00000612212.4 |
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| CDS-3UTR CAA 90 bp | CACATACACACAGACTCTCCCGCTCAGAGGCAAAGACCGGGGGCGTCAATCTCTTCTCTTGGCTTCCCCTaGAGAAGGATGCCTGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: HIHTDSPAQRQRPGASISSLGFP*RRMPEA Trigger: CGCCTCAGGCATCCTTCTCAAGGGGAAGCCAAGAGA...AGAGATTGACGCCCCCGGTCTTTGCCTCTGAGCGGGAGAGTCTGTGTGTATGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000509570.6 ENST00000601048.6 ENST00000612212.4 |
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| CDS GCA 90 bp | CACTCTTGCCTCTGCTTTGTCGAGCAGGCAGAGACGTTGGAAAGCTaGCGACAAACCCAGGTTCCAGTTACCCCTGTCACCTGCAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: HSCLCFVEQAETLES*RQTQVPVTPVTCSP Trigger: TGGACTGCAGGTGACAGGGGTAACTGGAACCTGGGTTTGTCGGCAGCTTTCCAACGTCTCTGCCTGCTCGACAAAGCAGAGGCAAGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS CCA 90 bp | CAGGCTCACCCAACCCCCACAGCAGGCTATTTCGGGACTGGAATCTaGTGTACAGGCCTGGTAGGCGTCTCAAAATGTCACTCTTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: QAHPTPTAGYFGTGI*CTGLVGVSKCHSCL Trigger: GAGGCAAGAGTGACATTTTGAGACGCCTACCAGGCCTGTACACCAGATTCCAGTCCCGAAATAGCCTGCTGTGGGGGTTGGGTGAGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS CCA 90 bp | ACTGAGGCCAGAAAAGGAGTGGGGTTCGTGGCCAAGGGAACCCACTaGGCAGAGGCCAACAATTCAAGTGCTTCTGAAACACAGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: TEARKGVGFVAKGTH*AEANNSSASETQAE Trigger: CTCAGCCTGTGTTTCAGAAGCACTTGAATTGTTGGCCTCTGCCCAGTGGGTTCCCTTGGCCACGAACCCCACTCCTTTTCTGGCCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598273.5 |
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| CDS GCA 90 bp | TGGTGTACAGGCCTGGTAGGCGTCTCAAAATGTCACTCTTGCCTCTaGTTTGTCGAGCAGGCAGAGACGTTGGAAAGCTGCCGACAAACC | + |
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Preference number: 5 (lower is better) Translates to: WCTGLVGVSKCHSCL*FVEQAETLESCRQT Trigger: GGTTTGTCGGCAGCTTTCCAACGTCTCTGCCTGCTCGACAAAGCAGAGGCAAGAGTGACATTTTGAGACGCCTACCAGGCCTGTACACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS GCA 90 bp | GGAATCTGGTGTACAGGCCTGGTAGGCGTCTCAAAATGTCACTCTTaGCTCTGCTTTGTCGAGCAGGCAGAGACGTTGGAAAGCTGCCGA | + |
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Preference number: 5 (lower is better) Translates to: GIWCTGLVGVSKCHS*LCFVEQAETLESCR Trigger: TCGGCAGCTTTCCAACGTCTCTGCCTGCTCGACAAAGCAGAGGCAAGAGTGACATTTTGAGACGCCTACCAGGCCTGTACACCAGATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS CCA 90 bp | CAAAATGTCACTCTTGCCTCTGCTTTGTCGAGCAGGCAGAGACGTTaGAAAGCTGCCGACAAACCCAGGTTCCAGTTACCCCTGTCACCT | + |
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Preference number: 5 (lower is better) Translates to: QNVTLASALSSRQRR*KAADKPRFQLPLSP Trigger: AGGTGACAGGGGTAACTGGAACCTGGGTTTGTCGGCAGCTTTCCAACGTCTCTGCCTGCTCGACAAAGCAGAGGCAAGAGTGACATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS CCA 90 bp | CTGCAGTGCCAGAGACCAGAAAAAGGGCTAGTAACTGTTCTAGAATaGGTTGGGTTTCACGCTTATCTGGACCATACTGGCTTACAAACT | + |
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Preference number: 5 (lower is better) Translates to: LQCQRPEKGLVTVLE*VGFHAYLDHTGLQT Trigger: AGTTTGTAAGCCAGTATGGTCCAGATAAGCGTGAAACCCAACCCATTCTAGAACAGTTACTAGCCCTTTTTCTGGTCTCTGGCACTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CCA 90 bp | GTGCCAGAGACCAGAAAAAGGGCTAGTAACTGTTCTAGAATGGGTTaGGTTTCACGCTTATCTGGACCATACTGGCTTACAAACTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: VPETRKRASNCSRMG*VSRLSGPYWLTNWK Trigger: TTTCCAGTTTGTAAGCCAGTATGGTCCAGATAAGCGTGAAACCCAACCCATTCTAGAACAGTTACTAGCCCTTTTTCTGGTCTCTGGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CCA 90 bp | ATGTTCAGTTCCAAAGTGGGTAAGTTTCTGGAGCTGGATCAGGTCTaGAATATTCCTAGAACTAATTCTCAGGTTCAGAGCCCGGTGATA | + |
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Preference number: 5 (lower is better) Translates to: MFSSKVGKFLELDQV*NIPRTNSQVQSPVI Trigger: TATCACCGGGCTCTGAACCTGAGAATTAGTTCTAGGAATATTCCAGACCTGATCCAGCTCCAGAAACTTACCCACTTTGGAACTGAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CCA 90 bp | AGACCTGCACATAAGGCAAGATATCGTTTCTGCATTACTTCAAATTaGCACGTCCCAATTCACATTGAACATGACCTCATTCTGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: RPAHKARYRFCITSN*HVPIHIEHDLILLW Trigger: CCAGAGCAGAATGAGGTCATGTTCAATGTGAATTGGGACGTGCCAATTTGAAGTAATGCAGAAACGATATCTTGCCTTATGTGCAGGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CCA 90 bp | TTCTTGGACTCATGTTCAGTTCCAAAGTGGGTAAGTTTCTGGAGCTaGATCAGGTCTGGAATATTCCTAGAACTAATTCTCAGGTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: FLDSCSVPKWVSFWS*IRSGIFLELILRFR Trigger: TCTGAACCTGAGAATTAGTTCTAGGAATATTCCAGACCTGATCCAGCTCCAGAAACTTACCCACTTTGGAACTGAACATGAGTCCAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CCA 90 bp | GCATTTGTTTCTAGAGCATTCTTGGACTCATGTTCAGTTCCAAAGTaGGTAAGTTTCTGGAGCTGGATCAGGTCTGGAATATTCCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: AFVSRAFLDSCSVPK*VSFWSWIRSGIFLE Trigger: TTCTAGGAATATTCCAGACCTGATCCAGCTCCAGAAACTTACCCACTTTGGAACTGAACATGAGTCCAAGAATGCTCTAGAAACAAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS TCA 90 bp | GAGTGGAGAGAACGTAATTTATATCCTATCCTATTATACCCTTCCTaGGACTTGCAGAAATTAAGCGTGTTCGGTATTGACACAGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: EWRERNLYPILLYPS*DLQKLSVFGIDTEP Trigger: AGGCTCTGTGTCAATACCGAACACGCTTAATTTCTGCAAGTCTCAGGAAGGGTATAATAGGATAGGATATAAATTACGTTCTCTCCACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000595509.1 ENST00000598273.5 |
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| CDS TCA 90 bp | TGGAAAATCAGACTCAGAAGGTGCTGGAAAGTAGTTCTTTGTTCCTaGGGTTCATATAGAAATTGCCACTTGTTCCACAATGTATTAGGC | + |
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Preference number: 5 (lower is better) Translates to: WKIRLRRCWKVVLCS*GSYRNCHLFHNVLG Trigger: GCCTAATACATTGTGGAACAAGTGGCAATTTCTATATGAACCTCAGGAACAAAGAACTACTTTCCAGCACCTTCTGAGTCTGATTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS GCA 90 bp | GATTTGCTTTGTTTCAGACCTGCACATAAGGCAAGATATCGTTTCTaGATTACTTCAAATTGGCACGTCCCAATTCACATTGAACATGAC | + |
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Preference number: 5 (lower is better) Translates to: DLLCFRPAHKARYRF*ITSNWHVPIHIEHD Trigger: GTCATGTTCAATGTGAATTGGGACGTGCCAATTTGAAGTAATGCAGAAACGATATCTTGCCTTATGTGCAGGTCTGAAACAAAGCAAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CCA 72 bp | GAACCTGCGCAGAAAGGATGGAGCCTCGGCTTCCCCTaGCGCCAACCAATGCCAGGGAGGGGCGGTGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: EPAQKGWSLGFP*RQPMPGRGGGR Trigger: CCGCCCACCGCCCCTCCCTGGCATTGGTTGGCGCCAGGGGAAGCCGAGGCTCCATCCTTTCTGCGCAGGTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509570.6 ENST00000612212.4 |
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| CDS GCA 72 bp | CTAACCTCCCACCTGGACGCGCTAGGTCTGCGCGAGTaGGGCGGGAACCTGCGCAGAAAGGATGGAGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LTSHLDALGLRE*GGNLRRKDGAS Trigger: CGAGGCTCCATCCTTTCTGCGCAGGTTCCCGCCGCACTCGCGCAGACCTAGCGCGTCCAGGTGGGAGGTTAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509570.6 ENST00000612212.4 |
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| CDS CCA 72 bp | TCTGCGCGAGTGCGGCGGGAACCTGCGCAGAAAGGATaGAGCCTCGGCTTCCCCTGGCGCCAACCAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: SARVRREPAQKG*SLGFPWRQPMP Trigger: TGGCATTGGTTGGCGCCAGGGGAAGCCGAGGCTCCATCCTTTCTGCGCAGGTTCCCGCCGCACTCGCGCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509570.6 ENST00000612212.4 |
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| CDS GCA 72 bp | TGCCGACAAACCCAGGTTCCAGTTACCCCTGTCACCTaGAGTCCAGACTTGAAGCTACTGACCTGCCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: CRQTQVPVTPVT*SPDLKLLTCPH Trigger: GTGGGGGCAGGTCAGTAGCTTCAAGTCTGGACTGCAGGTGACAGGGGTAACTGGAACCTGGGTTTGTCGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000598273.5 ENST00000599302.1 ENST00000599590.5 |
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| CDS GCA 72 bp | TCACCCACAGCCCTCGCAGCACTCCAAGGAAAACCCTaGGGCTCCTGGATTCTTACACCACGCCCAGCTAAT | + |
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Preference number: 6 (lower is better) Translates to: SPTALAALQGKP*GSWILTPRPAN Trigger: ATTAGCTGGGCGTGGTGTAAGAATCCAGGAGCCGCAGGGTTTTCCTTGGAGTGCTGCGAGGGCTGTGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598273.5 |
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| CDS CCA 72 bp | GGCTCACCCAACCCCCACAGCAGGCTATTTCGGGACTaGAATCTGGTGTACAGGCCTGGTAGGCGTCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: GSPNPHSRLFRD*NLVYRPGRRLK Trigger: TTTGAGACGCCTACCAGGCCTGTACACCAGATTCCAGTCCCGAAATAGCCTGCTGTGGGGGTTGGGTGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS CCA 72 bp | CCTGCAGTGCCATCCAGGCCTAACGGACCGACACAGTaGCTGTGCTCAAGTCTTTCTCCCCATCCCAAGACT | + |
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Preference number: 6 (lower is better) Translates to: PAVPSRPNGPTQ*LCSSLSPHPKT Trigger: AGTCTTGGGATGGGGAGAAAGACTTGAGCACAGCCACTGTGTCGGTCCGTTAGGCCTGGATGGCACTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000598083.1 ENST00000598956.5 ENST00000599874.5 |
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| CDS GCA 72 bp | CTCTGCTTTGTCGAGCAGGCAGAGACGTTGGAAAGCTaGCGACAAACCCAGGTTCCAGTTACCCCTGTCACC | + |
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Preference number: 6 (lower is better) Translates to: LCFVEQAETLES*RQTQVPVTPVT Trigger: GGTGACAGGGGTAACTGGAACCTGGGTTTGTCGGCAGCTTTCCAACGTCTCTGCCTGCTCGACAAAGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS GCA 72 bp | GTGCCATCCAGGCCTAACGGACCGACACAGTGGCTGTaGTCAAGTCTTTCTCCCCATCCCAAGACTCACGAT | + |
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Preference number: 6 (lower is better) Translates to: VPSRPNGPTQWL*SSLSPHPKTHD Trigger: ATCGTGAGTCTTGGGATGGGGAGAAAGACTTGAGCACAGCCACTGTGTCGGTCCGTTAGGCCTGGATGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000598083.1 ENST00000598956.5 ENST00000599874.5 |
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| CDS GCA 72 bp | GGCCTGGTAGGCGTCTCAAAATGTCACTCTTGCCTCTaGTTTGTCGAGCAGGCAGAGACGTTGGAAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GLVGVSKCHSCL*FVEQAETLESC Trigger: GCAGCTTTCCAACGTCTCTGCCTGCTCGACAAAGCAGAGGCAAGAGTGACATTTTGAGACGCCTACCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS CCA 72 bp | ACTCTTGCCTCTGCTTTGTCGAGCAGGCAGAGACGTTaGAAAGCTGCCGACAAACCCAGGTTCCAGTTACCC | + |
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Preference number: 6 (lower is better) Translates to: TLASALSSRQRR*KAADKPRFQLP Trigger: GGGTAACTGGAACCTGGGTTTGTCGGCAGCTTTCCAACGTCTCTGCCTGCTCGACAAAGCAGAGGCAAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS CCA 72 bp | CCAACCCCCACAGCAGGCTATTTCGGGACTGGAATCTaGTGTACAGGCCTGGTAGGCGTCTCAAAATGTCAC | + |
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Preference number: 6 (lower is better) Translates to: PTPTAGYFGTGI*CTGLVGVSKCH Trigger: GTGACATTTTGAGACGCCTACCAGGCCTGTACACCAGATTCCAGTCCCGAAATAGCCTGCTGTGGGGGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS CAA 90 bp | TGGAATCTGGTGTACAGGCCTGGTAGGCGTCTCAAAATGTCACTCTaGCCTCTGCTTTGTCGAGCAGGCAGAGACGTTGGAAAGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: WNLVYRPGRRLKMSL*PLLCRAGRDVGKLP Trigger: CGGCAGCTTTCCAACGTCTCTGCCTGCTCGACAAAGCAGAGGCAAGAGTGACATTTTGAGACGCCTACCAGGCCTGTACACCAGATTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS GCA 72 bp | CTCCCAAGCAGCTGCGACTACAGGAGTGCGCCACCATaGCCGGCTAACTTTTTAAGTTTCTGTAGAGACGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPSSCDYRSAPP*PANFLSFCRDE Trigger: CTCGTCTCTACAGAAACTTAAAAAGTTAGCCGGGCATGGTGGCGCACTCCTGTAGTCGCAGCTGCTTGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000595509.1 ENST00000598273.5 ENST00000599590.5 |
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| CDS CAA 72 bp | GTGTACAGGCCTGGTAGGCGTCTCAAAATGTCACTCTaGCCTCTGCTTTGTCGAGCAGGCAGAGACGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: VYRPGRRLKMSL*PLLCRAGRDVG Trigger: TCCAACGTCTCTGCCTGCTCGACAAAGCAGAGGCAAGAGTGACATTTTGAGACGCCTACCAGGCCTGTACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS CAA 90 bp | TCAAAATGTCACTCTTGCCTCTGCTTTGTCGAGCAGGCAGAGACGTaGGAAAGCTGCCGACAAACCCAGGTTCCAGTTACCCCTGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: SKCHSCLCFVEQAET*ESCRQTQVPVTPVT Trigger: GGTGACAGGGGTAACTGGAACCTGGGTTTGTCGGCAGCTTTCCAACGTCTCTGCCTGCTCGACAAAGCAGAGGCAAGAGTGACATTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS GCA 72 bp | TGTACAGGCCTGGTAGGCGTCTCAAAATGTCACTCTTaGCTCTGCTTTGTCGAGCAGGCAGAGACGTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CTGLVGVSKCHS*LCFVEQAETLE Trigger: TTCCAACGTCTCTGCCTGCTCGACAAAGCAGAGGCAAGAGTGACATTTTGAGACGCCTACCAGGCCTGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000598273.5 ENST00000599302.1 |
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| CDS GCA 72 bp | CTCCCAAGCAGCTGCGACTACAGGAGTGCGCCACCATaGCCGGCTAACTTTTTAAGTTTCAATAAACGACTC | + |
|
Preference number: 6 (lower is better) Translates to: LPSSCDYRSAPP*PANFLSFNKRL Trigger: GAGTCGTTTATTGAAACTTAAAAAGTTAGCCGGGCATGGTGGCGCACTCCTGTAGTCGCAGCTGCTTGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599302.1 |
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| CDS TCA 72 bp | CTCTGTTCTAGATCAACATGGAATGGGAACTGGTGCTaGAGGTTAGAGGGGAGTAAAAAGTATGGCCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LCSRSTWNGNWC*RLEGSKKYGQA Trigger: CGCCTGGCCATACTTTTTACTCCCCTCTAACCTTCAGCACCAGTTCCCATTCCATGTTGATCTAGAACAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CCA 72 bp | CAGAGACCAGAAAAAGGGCTAGTAACTGTTCTAGAATaGGTTGGGTTTCACGCTTATCTGGACCATACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QRPEKGLVTVLE*VGFHAYLDHTG Trigger: GCCAGTATGGTCCAGATAAGCGTGAAACCCAACCCATTCTAGAACAGTTACTAGCCCTTTTTCTGGTCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS TCA 72 bp | CCACGCTCAACAGCAACAGTCCACAATGCATTCAGCTaGTGCAGCTTTGGAATTAGGCAATTCCATTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PRSTATVHNAFS*CSFGIRQFHFS Trigger: AGAAAAATGGAATTGCCTAATTCCAAAGCTGCATCAGCTGAATGCATTGTGGACTGTTGCTGTTGAGCGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CCA 72 bp | TCCAAAGTGGGTAAGTTTCTGGAGCTGGATCAGGTCTaGAATATTCCTAGAACTAATTCTCAGGTTCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SKVGKFLELDQV*NIPRTNSQVQS Trigger: GCTCTGAACCTGAGAATTAGTTCTAGGAATATTCCAGACCTGATCCAGCTCCAGAAACTTACCCACTTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CCA 72 bp | TCTAGAGCATTCTTGGACTCATGTTCAGTTCCAAAGTaGGTAAGTTTCTGGAGCTGGATCAGGTCTGGAATA | + |
|
Preference number: 6 (lower is better) Translates to: SRAFLDSCSVPK*VSFWSWIRSGI Trigger: TATTCCAGACCTGATCCAGCTCCAGAAACTTACCCACTTTGGAACTGAACATGAGTCCAAGAATGCTCTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CCA 72 bp | ACCAGAAAAAGGGCTAGTAACTGTTCTAGAATGGGTTaGGTTTCACGCTTATCTGGACCATACTGGCTTACA | + |
|
Preference number: 6 (lower is better) Translates to: TRKRASNCSRMG*VSRLSGPYWLT Trigger: TGTAAGCCAGTATGGTCCAGATAAGCGTGAAACCCAACCCATTCTAGAACAGTTACTAGCCCTTTTTCTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CCA 72 bp | CCTACAGCATGCCACACAGTATTAGGTGCTGGGGAGTaGAGAGAACGTAATTTATATCCTATCCTATTATAC | + |
|
Preference number: 6 (lower is better) Translates to: PTACHTVLGAGE*RERNLYPILLY Trigger: GTATAATAGGATAGGATATAAATTACGTTCTCTCCACTCCCCAGCACCTAATACTGTGTGGCATGCTGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595509.1 ENST00000598273.5 |
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| CDS CAA 90 bp | AGCAGACAATCCATTCTAGAGTTAGCATTTGTTTCTAGAGCATTCTaGGACTCATGTTCAGTTCCAAAGTGGGTAAGTTTCTGGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRQSILELAFVSRAF*DSCSVPKWVSFWSW Trigger: CCAGCTCCAGAAACTTACCCACTTTGGAACTGAACATGAGTCCAAGAATGCTCTAGAAACAAATGCTAACTCTAGAATGGATTGTCTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CCA 72 bp | TCATGTTCAGTTCCAAAGTGGGTAAGTTTCTGGAGCTaGATCAGGTCTGGAATATTCCTAGAACTAATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SCSVPKWVSFWS*IRSGIFLELIL Trigger: GAGAATTAGTTCTAGGAATATTCCAGACCTGATCCAGCTCCAGAAACTTACCCACTTTGGAACTGAACATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS GCA 72 bp | TGTTTCAGACCTGCACATAAGGCAAGATATCGTTTCTaGATTACTTCAAATTGGCACGTCCCAATTCACATT | + |
|
Preference number: 6 (lower is better) Translates to: CFRPAHKARYRF*ITSNWHVPIHI Trigger: AATGTGAATTGGGACGTGCCAATTTGAAGTAATGCAGAAACGATATCTTGCCTTATGTGCAGGTCTGAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CCA 72 bp | CATAAGGCAAGATATCGTTTCTGCATTACTTCAAATTaGCACGTCCCAATTCACATTGAACATGACCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: HKARYRFCITSN*HVPIHIEHDLI Trigger: AATGAGGTCATGTTCAATGTGAATTGGGACGTGCCAATTTGAAGTAATGCAGAAACGATATCTTGCCTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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| CDS CAA 72 bp | TCCATTCTAGAGTTAGCATTTGTTTCTAGAGCATTCTaGGACTCATGTTCAGTTCCAAAGTGGGTAAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SILELAFVSRAF*DSCSVPKWVSF Trigger: GAAACTTACCCACTTTGGAACTGAACATGAGTCCAAGAATGCTCTAGAAACAAATGCTAACTCTAGAATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602163.1 |
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