RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SELENOV (Homo sapiens)

Ensembl gene IDs: ENSG00000186838

Ensembl transcript IDs: ENST00000335426.8, ENST00000423711.4, ENST00000597876.1, ENST00000600586.1, ENST00000622070.2

Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTaGAGTGTCACGGGTTTGAGTCTGACTGCCATCCCCGTTTCCCTC +
Preference number: 1 (lower is better)
Translates to: RSYRFRKWALEHNRV*SVTGLSLTAIPVSL
Trigger: GAGGGAAACGGGGATGGCAGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR CCA 90 bp ACTATGTTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTaGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAGT +
Preference number: 1 (lower is better)
Translates to: TMLRRLEHRSYRFRK*ALEHNRVWSVTGLS
Trigger: ACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAACATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR TCA 90 bp GCAAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAACACAGACCTCAGAGGTaGGTGTGGCGACAGCAGACA +
Preference number: 2 (lower is better)
Translates to: ARGVEARQRTGATGLAFQHRPQR*VWRQQT
Trigger: TGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTG...TTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR TCA 90 bp GCAAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAATGGACACAGGGGTGCTaGCTCTGCATGTATTCTCCT +
Preference number: 2 (lower is better)
Translates to: ARGVEARQRTGATGLAFQWTQGC*LCMYSP
Trigger: AGGAGAATACATGCAGAGTCAGCACCCCTGTGTCCA...TTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR TCA 90 bp AAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAGCGGCCAGAATATCAGGTaGCTTCCACAGACCTCAGAG +
Preference number: 2 (lower is better)
Translates to: KRSGGQTEDWSYRTSLPSGQNIR*LPQTSE
Trigger: CTCTGAGGTCTGTGGAAGTCACCTGATATTCTGGCC...GCTTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR TCA 90 bp CAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTTTCTCATCATCCAGCTaGGACTCCTCCAGCTCCACC +
Preference number: 2 (lower is better)
Translates to: QPQPPSEKDLTWQHFSPSFSSSS*DSSSST
Trigger: GGTGGAGCTGGAGGAGTCTCAGCTGGATGATGAGAA...AGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000600586.1
ENST00000622070.2
3UTR-3UTR TCA 90 bp AAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAGTCTGACTTTCTCATCATCCAGCTaGGACTCCTCCAGCTCCACC +
Preference number: 2 (lower is better)
Translates to: KWALEHNRVWSVTGLSLTFSSSS*DSSSST
Trigger: GGTGGAGCTGGAGGAGTCTCAGCTGGATGATGAGAA...AGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR TCA 90 bp CTATGTTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGCACAGACCTCAGAGGTaGGTGTGGCGACAGCAGACA +
Preference number: 2 (lower is better)
Translates to: LCCAGWNIDLTGLESGPWHRPQR*VWRQQT
Trigger: TGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTG...CCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAACATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR CCA 90 bp AGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGCAGGAGCAAGAGGAGTaGAGGCCAGACAGAGGACTG +
Preference number: 2 (lower is better)
Translates to: RFRKWALEHNRVWSVTGLQEQEE*RPDRGL
Trigger: CAGTCCTCTGTCTGGCCTCCACTCCTCTTGCTCCTG...CAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR TCA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATTTCTCATCATCCAGCTaGGACTCCTCCAGCTCCACC +
Preference number: 2 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHFSSSS*DSSSST
Trigger: GGTGGAGCTGGAGGAGTCTCAGCTGGATGATGAGAA...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR CCA 90 bp CCAGCTGAGACTCCTCCAGCTCCACCCCTTGCCGGCTACCTTTTCTTGATTTCCGAAAAGGACCTGACTTaGCAACATTTCAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: PAETPPAPPLAGYLFLISEKDLT*QHFSPS
Trigger: AGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTC...GGAAATCAAGAAAAGGTAGCCGGCAAGGGGTGGAGCTGGAGGAGTCTCAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600586.1
3UTR-3UTR TCA 90 bp AAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAGTCTGACTCCAGGGCATGGGAAATaGCGAATCCACAAAAGAAAC +
Preference number: 2 (lower is better)
Translates to: KWALEHNRVWSVTGLSLTPGHGK*RIHKRN
Trigger: GTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGG...AGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR CCA 90 bp CAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTGAAAAGGACCTGACTTaGCAACATTTCAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: QPQPPSEKDLTWQHFSPSEKDLT*QHFSPS
Trigger: AGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTC...AGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000600586.1
ENST00000622070.2
3UTR-3UTR CCA 90 bp AAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAGTCTGACTGAAAAGGACCTGACTTaGCAACATTTCAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: KWALEHNRVWSVTGLSLTEKDLT*QHFSPS
Trigger: AGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTC...AGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR CCA 90 bp AGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGTCTGGAACCAGGGCATaGGAAATGACGAATCCACAA +
Preference number: 2 (lower is better)
Translates to: RFRKWALEHNRVWSVTGLSGTRA*EMTNPQ
Trigger: TTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGA...CAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR CCA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATGAAAAGGACCTGACTTaGCAACATTTCAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHEKDLT*QHFSPS
Trigger: AGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTC...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR CCA 90 bp TTTCAAAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAACAGGAGCAAGAGGAGTaGAGGCCAGACAGAGGACTG +
Preference number: 2 (lower is better)
Translates to: FQNVSGTRAWEMTNPQKKQEQEE*RPDRGL
Trigger: CAGTCCTCTGTCTGGCCTCCACTCCTCTTGCTCCTG...TTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR TCA 90 bp AAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAACAAACTGGACACAGGGGTGCTaGCTCTGCATGTATTCTCCT +
Preference number: 2 (lower is better)
Translates to: KCIWNQGMGNDESTKETNWTQGC*LCMYSP
Trigger: AGGAGAATACATGCAGAGTCAGCACCCCTGTGTCCA...GTTTGTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR TCA 90 bp TACCTTTTCTTGATTTCCTCATCGATAACGCTCACAATTTTCTGCAGCCTGGACCCCCTAAAGAGTAGGTaGTTCGGAAATTGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: YLFLISSSITLTIFCSLDPLKSR*FGNCCS
Trigger: GGAGCAGCAATTTCCGAATCACCTACTCTTTAGGGG...GTCCAGGCTGCAGAAAATTGTGAGCGTTATCGATGAGGAAATCAAGAAAAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600586.1
3UTR-3UTR CCA 90 bp TTTCAAAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAAGGCCAGACAGAGGACTaGAGCTACAGGACTAGCCTT +
Preference number: 2 (lower is better)
Translates to: FQNVSGTRAWEMTNPQKKGQTED*SYRTSL
Trigger: AAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCC...TTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR CCA 90 bp AAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAGTCTGACTTTTTCAAAATGTATCTaGAACCAGGGCATGGGAAAT +
Preference number: 2 (lower is better)
Translates to: KWALEHNRVWSVTGLSLTFSKCI*NQGMGN
Trigger: ATTTCCCATGCCCTGGTTCCAGATACATTTTGAAAA...AGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR CCA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATTTTTCAAAATGTATCTaGAACCAGGGCATGGGAAAT +
Preference number: 2 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHFSKCI*NQGMGN
Trigger: ATTTCCCATGCCCTGGTTCCAGATACATTTTGAAAA...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR CCA 72 bp AGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTaGAGTGTCACGGGTTTGAGTCTGACTGCCATCCCC +
Preference number: 3 (lower is better)
Translates to: RFRKWALEHNRV*SVTGLSLTAIP
Trigger: GGGGATGGCAGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR CAA 90 bp CCAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCAGAAAAGGACCTGACTaGGCAACATTTCAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: PAPATIRKGPDLATFQPFRKGPD*ATFQPF
Trigger: GAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCT...GAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000600586.1
ENST00000622070.2
3UTR GCA 72 bp GGCATGGGAAATGACGAATCCACAAAAGAAACAAACTaGCCTCAGGAGCAAGAGGAGTGGAGGCCAGACAGA +
Preference number: 3 (lower is better)
Translates to: GMGNDESTKETN*PQEQEEWRPDR
Trigger: TCTGTCTGGCCTCCACTCCTCTTGCTCCTGAGGGCAGTTTGTTTCTTTTGTGGATTCGTCATTTCCCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR-3UTR CAA 90 bp ACTCCTCCAGCTCCACCCCTTGCCGGCTACCTTTTCTTGATTTCCTCATCGATAAGAAAAGGACCTGACTaGGCAACATTTCAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: TPPAPPLAGYLFLISSSIRKGPD*ATFQPF
Trigger: GAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCT...TATCGATGAGGAAATCAAGAAAAGGTAGCCGGCAAGGGGTGGAGCTGGAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600586.1
3UTR-3UTR CAA 90 bp AAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAGTCTGACTAGAAAAGGACCTGACTaGGCAACATTTCAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: KWALEHNRVWSVTGLSLTRKGPD*ATFQPF
Trigger: GAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCT...AGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR CCA 72 bp CGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTaGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACG +
Preference number: 3 (lower is better)
Translates to: RRLEHRSYRFRK*ALEHNRVWSVT
Trigger: CGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
3UTR GCA 72 bp TTCTTGATTTCCTCATCGATAACGCTCACAATTTTCTaGAGCCTGGACTCGTTCACAAAGCCATCACCCCTA +
Preference number: 3 (lower is better)
Translates to: FLISSSITLTIF*SLDSFTKPSPL
Trigger: TAGGGGTGATGGCTTTGTGAACGAGTCCAGGCTGCAGAAAATTGTGAGCGTTATCGATGAGGAAATCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600586.1
CDS-3UTR TCA 90 bp GCAAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAACAGGGTGGGCCCGGGTaGGTTCGCGGCCAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: ARGVEARQRTGATGLAFQQGGPG*VRGQRG
Trigger: ACCCCGCTGGCCGCGAACTCACCCGGGCCCACCCTG...TTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AGAGGTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACCCGGGGCAAGCCGGTTaGGGAGTCCCGCCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: RGECGDSRHSQTGHRGADPGQAG*GVPPAF
Trigger: GAAGGCGGGCGGGACTCCCCAACCGGCTTGCCCCGG...GTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCACCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCACCGGGGCAAGCCGGTTaGGGAGTCCCGCCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: ECGDSRHSQTGHRGADSAPGQAG*GVPPAF
Trigger: GAAGGCGGGCGGGACTCCCCAACCGGCTTGCCCCGG...TGCAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AGAGGTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACGGCTGGGACCCGGACTaGAGGAGTCAGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: RGECGDSRHSQTGHRGADGWDPD*RSQGPS
Trigger: GCTCGGACCCTGACTCCTCCAGTCCGGGTCCCAGCC...GTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp GAATATCAGGTGACTTCCACAGACCTCAGAGGTGAGTGTGGCGACAGCAGACACCGCGGCCCGAATCCCTaGCAGGAGCTGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EYQVTSTDLRGECGDSRHRGPNP*QELGWG
Trigger: GCCCCAGCCCAGCTCCTGGCAGGGATTCGGGCCGCG...GTGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTGGAAGTCACCTGATATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAGCCCCGCCTTCCCTCTTTaGGCGGGGAGAGCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: KRSGGQTEDWSYRTSLPSPAFPL*AGRASP
Trigger: GGGAGACGCTCTCCCCGCCCAAAGAGGGAAGGCGGG...GCTTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GCAAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAACCCGCCTTCCCTCTTTaGGCGGGGAGAGCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: ARGVEARQRTGATGLAFQPAFPL*AGRASP
Trigger: GGGAGACGCTCTCCCCGCCCAAAGAGGGAAGGCGGG...TTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GCAAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAGAGTCAGGGTCCGGATaGGGGTCCGAGTCCGGACCG +
Preference number: 4 (lower is better)
Translates to: ARGVEARQRTGATGLAFQESGSG*GSESGP
Trigger: CGGTCCGGACTCGGACCCCCATCCGGACCCTGACTC...TTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGGGACAGGACTGGGAATaGGGGGATCCGCCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: VSVATADTVRLDTGVLTLGQDWE*GDPPAR
Trigger: TCGGGCTGGCGGATCCCCCCATTCCCAGTCCTGTCC...CAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCGCGCCTGGTTATTCATaGGGCCCAGGGGGACCGGGG +
Preference number: 4 (lower is better)
Translates to: PAPATIRKGPDLATFQPFAPGYS*GPGGPG
Trigger: CCCCGGTCCCCCTGGGCCCCATGAATAACCAGGCGC...GAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GCAAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAGCTGGGGTCCGCGCCTaGTTATTCATGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ARGVEARQRTGATGLAFQAGVRA*LFMGPR
Trigger: CCTGGGCCCCATGAATAACCAGGCGCGGACCCCAGC...TTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AGAGGTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACAGGGGAAGTCCCGGCTaGAGACGGAGTCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: RGECGDSRHSQTGHRGADRGSPG*RRSQDW
Trigger: CCAGTCCTGACTCCGTCTCCAGCCGGGACTTCCCCT...GTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GCAAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAAGTCGGGACCGGAGTTaGGTTCCGGACGGGAACGGG +
Preference number: 4 (lower is better)
Translates to: ARGVEARQRTGATGLAFQSRDRS*VPDGNG
Trigger: CCCGTTCCCGTCCGGAACCCAACTCCGGTCCCGACT...TTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAGCGGACAGGACTGGGAATaGGGGGATCCGCCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: KRSGGQTEDWSYRTSLPSGQDWE*GDPPAR
Trigger: TCGGGCTGGCGGATCCCCCCATTCCCAGTCCTGTCC...GCTTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp GAATATCAGGTGACTTCCACAGACCTCAGAGGTGAGTGTGGCGACAGCAGACACTGGAGACCGACGGGATaGGCTTCAGGCTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: EYQVTSTDLRGECGDSRHWRPTG*ASGSAP
Trigger: CGGCGCCGAGCCTGAAGCTCATCCCGTCGGTCTCCA...GTGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTGGAAGTCACCTGATATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp CCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTCATCATCCACAGGGTGGGCCCGGGTaGGTTCGCGGCCAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: PPSEKDLTWQHFSPSHHPQGGPG*VRGQRG
Trigger: ACCCCGCTGGCCGCGAACTCACCCGGGCCCACCCTG...TGGATGATGAGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATCGCGGCCCGAATCCCTaGCAGGAGCTGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHRGPNP*QELGWG
Trigger: GCCCCAGCCCAGCTCCTGGCAGGGATTCGGGCCGCG...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTCCCGCCTTCCCTCTTTaGGCGGGGAGAGCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QPQPPSEKDLTWQHFSPSPAFPL*AGRASP
Trigger: GGGAGACGCTCTCCCCGCCCAAAGAGGGAAGGCGGG...AGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GAATATCAGGTGACTTCCACAGACCTCAGAGGTGAGTGTGGCGACAGCAGACACCGCCGAGGAGGGGGCTaGGGTCCGCGCCTGGTTATT +
Preference number: 4 (lower is better)
Translates to: EYQVTSTDLRGECGDSRHRRGGG*GPRLVI
Trigger: AATAACCAGGCGCGGACCCCAGCCCCCTCCTCGGCG...GTGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTGGAAGTCACCTGATATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GCAAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAGGGCCAGAGCGGGAGTaGGGACCAGAGTGGGAATCT +
Preference number: 4 (lower is better)
Translates to: ARGVEARQRTGATGLAFQGPERE*GPEWES
Trigger: AGATTCCCACTCTGGTCCCCACTCCCGCTCTGGCCC...TTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAGCGGGCCAGAGCGGGAGTaGGGACCAGAGTGGGAATCT +
Preference number: 4 (lower is better)
Translates to: KRSGGQTEDWSYRTSLPSGPERE*GPEWES
Trigger: AGATTCCCACTCTGGTCCCCACTCCCGCTCTGGCCC...GCTTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCAGTCGGGACCGGAGTTaGGTTCCGGACGGGAACGGG +
Preference number: 4 (lower is better)
Translates to: PAPATIRKGPDLATFQPFSRDRS*VPDGNG
Trigger: CCCGTTCCCGTCCGGAACCCAACTCCGGTCCCGACT...GAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTGGCTGGGACCCGGACTaGAGGAGTCAGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: QPQPPSEKDLTWQHFSPSGWDPD*RSQGPS
Trigger: GCTCGGACCCTGACTCCTCCAGTCCGGGTCCCAGCC...AGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCGGACAGGACTGGGAATaGGGGGATCCGCCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: PAPATIRKGPDLATFQPFGQDWE*GDPPAR
Trigger: TCGGGCTGGCGGATCCCCCCATTCCCAGTCCTGTCC...GAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000600586.1
ENST00000622070.2
CDS-3UTR TCA 90 bp AGAGGTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACCACAGACCTCAGAGGTaGGTGTGGCGACAGCAGACA +
Preference number: 4 (lower is better)
Translates to: RGECGDSRHSQTGHRGADHRPQR*VWRQQT
Trigger: TGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTG...GTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp GTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCACAGACCTCAGAGGTaGGTGTGGCGACAGCAGACA +
Preference number: 4 (lower is better)
Translates to: VSVATADTVRLDTGVLTLHRPQR*VWRQQT
Trigger: TGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTG...CAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp GCAAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAGATGGCCGACGGGTCTaGCCTGAAGGTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ARGVEARQRTGATGLAFQDGRRV*PEGEVQ
Trigger: CTGGACTTCACCTTCAGGGCAGACCCGTCGGCCATC...TTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GAATATCAGGTGACTTCCACAGACCTCAGAGGTGAGTGTGGCGACAGCAGACACGCTGGGGTCCGCGCCTaGTTATTCATGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EYQVTSTDLRGECGDSRHAGVRA*LFMGPR
Trigger: CCTGGGCCCCATGAATAACCAGGCGCGGACCCCAGC...GTGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTGGAAGTCACCTGATATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAGTCTGACTAGTCGGGGTCCGGAGTaGAGTCGGTGTCCGGGTCGG +
Preference number: 4 (lower is better)
Translates to: KWALEHNRVWSVTGLSLTSRGPE*SRCPGR
Trigger: CCGACCCGGACACCGACTCCACTCCGGACCCCGACT...AGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GCAAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAAGACGGAGTCAGGACTaGAGTCAGGGTCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: ARGVEARQRTGATGLAFQRRSQD*SQGPDG
Trigger: CCCATCCGGACCCTGACTCCAGTCCTGACTCCGTCT...TTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCTCCTCTTCCCCTCCCGAGTGGGGACCAGAGTaGGAATCTGGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VRLDTGVLTLHVFSSSPPEWGPE*ESGLEQ
Trigger: CTGCTCCAGCCCAGATTCCCACTCTGGTCCCCACTC...GGGAGGGGAAGAGGAGAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGAACTCCCCTGTAGCCTaGGCAGCTCTGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VSVATADTVRLDTGVLTLNSPVA*AALSSS
Trigger: TGAGGAGGACAGAGCTGCCCAGGCTACAGGGGAGTT...CAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp AGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGTGGAGACCGACGGGATaGGCTTCAGGCTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: RFRKWALEHNRVWSVTGLWRPTG*ASGSAP
Trigger: CGGCGCCGAGCCTGAAGCTCATCCCGTCGGTCTCCA...CAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp AGAGGTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTTCTCATCATCCAGCTaGGACTCCTCCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RGECGDSRHSQTGHRGADFSSSS*DSSSST
Trigger: GGTGGAGCTGGAGGAGTCTCAGCTGGATGATGAGAA...GTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp GTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCTCCTCTTCCCCTCCCCACAGACCTCAGAGGTaGGTGTGGCGACAGCAGACA +
Preference number: 4 (lower is better)
Translates to: VRLDTGVLTLHVFSSSPPHRPQR*VWRQQT
Trigger: TGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTG...GGGAGGGGAAGAGGAGAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CTATGTTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGGCGCCTGGTTATTCATaGGGCCCAGGGGGACCGGGG +
Preference number: 4 (lower is better)
Translates to: LCCAGWNIDLTGLESGPWAPGYS*GPGGPG
Trigger: CCCCGGTCCCCCTGGGCCCCATGAATAACCAGGCGC...CCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAACATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CTATGTTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGCGCCGAGGAGGGGGCTaGGGTCCGCGCCTGGTTATT +
Preference number: 4 (lower is better)
Translates to: LCCAGWNIDLTGLESGPWRRGGG*GPRLVI
Trigger: AATAACCAGGCGCGGACCCCAGCCCCCTCCTCGGCG...CCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAACATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATGAGTCAGGGTCCGGATaGGGGTCCGAGTCCGGACCG +
Preference number: 4 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHESGSG*GSESGP
Trigger: CGGTCCGGACTCGGACCCCCATCCGGACCCTGACTC...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCTCCTCTTCCCCTCCCAGTGGGAATCTGGGCTaGAGCAGGAGTCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: VRLDTGVLTLHVFSSSPPSGNLG*SRSQDQ
Trigger: CTGGTCCTGACTCCTGCTCCAGCCCAGATTCCCACT...GGGAGGGGAAGAGGAGAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAGCAGTGGGAATCTGGGCTaGAGCAGGAGTCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: KRSGGQTEDWSYRTSLPSSGNLG*SRSQDQ
Trigger: CTGGTCCTGACTCCTGCTCCAGCCCAGATTCCCACT...GCTTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCGAGTGGGGACCAGAGTaGGAATCTGGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PAPATIRKGPDLATFQPFEWGPE*ESGLEQ
Trigger: CTGCTCCAGCCCAGATTCCCACTCTGGTCCCCACTC...GAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAGTCTGACTAGTCGGGACCGGAGTTaGGTTCCGGACGGGAACGGG +
Preference number: 4 (lower is better)
Translates to: KWALEHNRVWSVTGLSLTSRDRS*VPDGNG
Trigger: CCCGTTCCCGTCCGGAACCCAACTCCGGTCCCGACT...AGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATGGCTGGGACCCGGACTaGAGGAGTCAGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHGWDPD*RSQGPS
Trigger: GCTCGGACCCTGACTCCTCCAGTCCGGGTCCCAGCC...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCGCGCGAAGTTCTCGCTaGAGGAGGGGAAGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: PAPATIRKGPDLATFQPFARSSR*RRGRFP
Trigger: CGGAAACCTTCCCCTCCTCCAGCGAGAACTTCGCGC...GAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000600586.1
ENST00000622070.2
CDS-3UTR TCA 90 bp GTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCTCCTCTTCCCCTCCCTTCTCATCATCCAGCTaGGACTCCTCCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: VRLDTGVLTLHVFSSSPPFSSSS*DSSSST
Trigger: GGTGGAGCTGGAGGAGTCTCAGCTGGATGATGAGAA...GGGAGGGGAAGAGGAGAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTCATCATCCACGCCGAGGAGGGGGCTaGGGTCCGCGCCTGGTTATT +
Preference number: 4 (lower is better)
Translates to: PPSEKDLTWQHFSPSHHPRRGGG*GPRLVI
Trigger: AATAACCAGGCGCGGACCCCAGCCCCCTCCTCGGCG...TGGATGATGAGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTCATCATCCAAGTCGGGGTCCGGAGTaGAGTCGGTGTCCGGGTCGG +
Preference number: 4 (lower is better)
Translates to: PPSEKDLTWQHFSPSHHPSRGPE*SRCPGR
Trigger: CCGACCCGGACACCGACTCCACTCCGGACCCCGACT...TGGATGATGAGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCAGTGGGAATCTGGGCTaGAGCAGGAGTCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: ATADTVRLDTGVLTLHVFSGNLG*SRSQDQ
Trigger: CTGGTCCTGACTCCTGCTCCAGCCCAGATTCCCACT...GAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAGTCTGACTGGGCCAGAGCGGGAGTaGGGACCAGAGTGGGAATCT +
Preference number: 4 (lower is better)
Translates to: KWALEHNRVWSVTGLSLTGPERE*GPEWES
Trigger: AGATTCCCACTCTGGTCCCCACTCCCGCTCTGGCCC...AGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATAGATGGCCGACGGGATaGTCCCCAGGATGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHRWPTG*SPGWAR
Trigger: CCTCGCCCATCCTGGGGACCATCCCGTCGGCCATCT...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CTATGTTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGATGGCCGACGGGATaGTCCCCAGGATGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LCCAGWNIDLTGLESGPWRWPTG*SPGWAR
Trigger: CCTCGCCCATCCTGGGGACCATCCCGTCGGCCATCT...CCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAACATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AGAGGTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACAATTCTGTAAGGAGATaGCCGACGGGATGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RGECGDSRHSQTGHRGADNSVRR*PTGWSP
Trigger: TGGGGACCATCCCGTCGGCCATCTCCTTACAGAATT...GTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GCAAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAGGCCAGACAGAGGACTaGAGCTACAGGACTAGCCTT +
Preference number: 4 (lower is better)
Translates to: ARGVEARQRTGATGLAFQGQTED*SYRTSL
Trigger: AAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCC...TTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp GCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCTTCTCATCATCCAGCTaGGACTCCTCCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: ATADTVRLDTGVLTLHVFFSSSS*DSSSST
Trigger: GGTGGAGCTGGAGGAGTCTCAGCTGGATGATGAGAA...GAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp GTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCTCCTCTTCCCCTCCCTCCAGCTCCACCCCTTaGCGGCTACCTTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: VRLDTGVLTLHVFSSSPPSSSTP*RLPFLD
Trigger: ATCAAGAAAAGGTAGCCGGCAAGGGGTGGAGCTGGA...GGGAGGGGAAGAGGAGAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp AGAGGTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACGGGGTCTCACTATGTTaGGCAGGCTGGAACATAGAT +
Preference number: 4 (lower is better)
Translates to: RGECGDSRHSQTGHRGADGVSLC*AGWNID
Trigger: ATCTATGTTCCAGCCTGCGCAACATAGTGAGACCCC...GTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp GAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCAGGGGTCTCACTATGTTaGGCAGGCTGGAACATAGAT +
Preference number: 4 (lower is better)
Translates to: ECGDSRHSQTGHRGADSAGVSLC*AGWNID
Trigger: ATCTATGTTCCAGCCTGCGCAACATAGTGAGACCCC...TGCAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATAGGGGAAGTCCCGGCTaGAGACGGAGTCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHRGSPG*RRSQDW
Trigger: CCAGTCCTGACTCCGTCTCCAGCCGGGACTTCCCCT...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CTATGTTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGGGGAAGTCCCGGCTaGAGACGGAGTCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: LCCAGWNIDLTGLESGPWRGSPG*RRSQDW
Trigger: CCAGTCCTGACTCCGTCTCCAGCCGGGACTTCCCCT...CCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAACATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TCCTCATCGATAACGCTCACAATTTTCTGCAGCCTGGACTCGTTCACAAAGCCAGGACAGGACTGGGAATaGGGGGATCCGCCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: SSSITLTIFCSLDSFTKPGQDWE*GDPPAR
Trigger: TCGGGCTGGCGGATCCCCCCATTCCCAGTCCTGTCC...TGGCTTTGTGAACGAGTCCAGGCTGCAGAAAATTGTGAGCGTTATCGATGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600586.1
CDS-3UTR CCA 90 bp GTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCTCCTCTTCCCCTCCCCCCCTCTTCTTGGAATaGACCAGTCTCCCGTTCACA +
Preference number: 4 (lower is better)
Translates to: VRLDTGVLTLHVFSSSPPPLFLE*TSLPFT
Trigger: TGTGAACGGGAGACTGGTCCATTCCAAGAAGAGGGG...GGGAGGGGAAGAGGAGAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGAC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GAATATCAGGTGACTTCCACAGACCTCAGAGGTGAGTGTGGCGACAGCAGACACCAGGAGCAAGAGGAGTaGAGGCCAGACAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: EYQVTSTDLRGECGDSRHQEQEE*RPDRGL
Trigger: CAGTCCTCTGTCTGGCCTCCACTCCTCTTGCTCCTG...GTGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTGGAAGTCACCTGATATTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp AAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAACAAACCGCGGCCCGAATCCCTaGCAGGAGCTGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KCIWNQGMGNDESTKETNRGPNP*QELGWG
Trigger: GCCCCAGCCCAGCTCCTGGCAGGGATTCGGGCCGCG...GTTTGTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp AGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGGATGGCCGACGGGTCTaGCCTGAAGGTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RFRKWALEHNRVWSVTGLDGRRV*PEGEVQ
Trigger: CTGGACTTCACCTTCAGGGCAGACCCGTCGGCCATC...CAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp GCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCTCCAGCTCCACCCCTTaGCGGCTACCTTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: ATADTVRLDTGVLTLHVFSSSTP*RLPFLD
Trigger: ATCAAGAAAAGGTAGCCGGCAAGGGGTGGAGCTGGA...GAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CTATGTTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGACGGAGTCAGGACTaGAGTCAGGGTCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: LCCAGWNIDLTGLESGPWRRSQD*SQGPDG
Trigger: CCCATCCGGACCCTGACTCCAGTCCTGACTCCGTCT...CCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAACATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCAATTCTGTAAGGAGATaGCCGACGGGATGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ATADTVRLDTGVLTLHVFNSVRR*PTGWSP
Trigger: TGGGGACCATCCCGTCGGCCATCTCCTTACAGAATT...GAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCAATTCTGTAAGGAGATaGCCGACGGGATGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PAPATIRKGPDLATFQPFNSVRR*PTGWSP
Trigger: TGGGGACCATCCCGTCGGCCATCTCCTTACAGAATT...GAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000600586.1
ENST00000622070.2
CDS-3UTR CCA 90 bp CTATGTTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGGCGCGAAGTTCTCGCTaGAGGAGGGGAAGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: LCCAGWNIDLTGLESGPWARSSR*RRGRFP
Trigger: CGGAAACCTTCCCCTCCTCCAGCGAGAACTTCGCGC...CCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAACATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATGCGCGAAGTTCTCGCTaGAGGAGGGGAAGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHARSSR*RRGRFP
Trigger: CGGAAACCTTCCCCTCCTCCAGCGAGAACTTCGCGC...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TCGATAACGCTCACAATTTTCTGCAGCCTGGACTCGTTCACAAAGCCATCACCCGCGCGAAGTTCTCGCTaGAGGAGGGGAAGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: SITLTIFCSLDSFTKPSPARSSR*RRGRFP
Trigger: CGGAAACCTTCCCCTCCTCCAGCGAGAACTTCGCGC...GGGTGATGGCTTTGTGAACGAGTCCAGGCTGCAGAAAATTGTGAGCGTTATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600586.1
CDS-3UTR CCA 90 bp GCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCCATCACCCCTCTTCTTaGAATGGACCAGTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: ATADTVRLDTGVLTLHVFHHPSS*NGPVSR
Trigger: ACGGGAGACTGGTCCATTCCAAGAAGAGGGGTGATG...GAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAGTCTGACTCAGGAGCAAGAGGAGTaGAGGCCAGACAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: KWALEHNRVWSVTGLSLTQEQEE*RPDRGL
Trigger: CAGTCCTCTGTCTGGCCTCCACTCCTCTTGCTCCTG...AGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGTCTGGAACCAGGGCATaGGAAATGACGAATCCACAA +
Preference number: 4 (lower is better)
Translates to: VSVATADTVRLDTGVLTLSGTRA*EMTNPQ
Trigger: TTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGA...CAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AGAGGTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGGAACCAGGGCATaGGAAATGACGAATCCACAA +
Preference number: 4 (lower is better)
Translates to: RGECGDSRHSQTGHRGADSGTRA*EMTNPQ
Trigger: TTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGA...GTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp GCAAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAATCCTCAAAGAGTAGGTaGTTCGGAAATTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ARGVEARQRTGATGLAFQSSKSR*FGNCCS
Trigger: GGAGCAGCAATTTCCGAATCACCTACTCTTTGAGGA...TTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp CAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTGGCCAGAATATCAGGTaGCTTCCACAGACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: QPQPPSEKDLTWQHFSPSGQNIR*LPQTSE
Trigger: CTCTGAGGTCTGTGGAAGTCACCTGATATTCTGGCC...AGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp AAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAGCACGCTCACAATTTTCTaGAGCCTGGACTCGTTCACA +
Preference number: 4 (lower is better)
Translates to: KRSGGQTEDWSYRTSLPSTLTIF*SLDSFT
Trigger: TGTGAACGAGTCCAGGCTGCAGAAAATTGTGAGCGT...GCTTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp GCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCGGGGTCTCACTATGTTaGGCAGGCTGGAACATAGAT +
Preference number: 4 (lower is better)
Translates to: ATADTVRLDTGVLTLHVFGVSLC*AGWNID
Trigger: ATCTATGTTCCAGCCTGCGCAACATAGTGAGACCCC...GAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTCATCATCCAGAGTGGGGACCAGAGTaGGAATCTGGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PPSEKDLTWQHFSPSHHPEWGPE*ESGLEQ
Trigger: CTGCTCCAGCCCAGATTCCCACTCTGGTCCCCACTC...TGGATGATGAGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TTCTTGATTTCCTCATCGATAACGCTCACAATTTTCTGCAGCCTGGACTCGTTCAGATGGCCGACGGGATaGTCCCCAGGATGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: FLISSSITLTIFCSLDSFRWPTG*SPGWAR
Trigger: CCTCGCCCATCCTGGGGACCATCCCGTCGGCCATCT...GAACGAGTCCAGGCTGCAGAAAATTGTGAGCGTTATCGATGAGGAAATCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600586.1
CDS-3UTR CCA 90 bp AGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAACTCCCCTGTAGCCTaGGCAGCTCTGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RFRKWALEHNRVWSVTGLNSPVA*AALSSS
Trigger: TGAGGAGGACAGAGCTGCCCAGGCTACAGGGGAGTT...CAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GAATATCAGGTGACTTCCACAGACCTCAGAGGTGAGTGTGGCGACAGCAGACACCCCCTCTTCTTGGAATaGACCAGTCTCCCGTTCACA +
Preference number: 4 (lower is better)
Translates to: EYQVTSTDLRGECGDSRHPLFLE*TSLPFT
Trigger: TGTGAACGGGAGACTGGTCCATTCCAAGAAGAGGGG...GTGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTGGAAGTCACCTGATATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GAATATCAGGTGACTTCCACAGACCTCAGAGGTGAGTGTGGCGACAGCAGACACCATCACCCCTCTTCTTaGAATGGACCAGTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: EYQVTSTDLRGECGDSRHHHPSS*NGPVSR
Trigger: ACGGGAGACTGGTCCATTCCAAGAAGAGGGGTGATG...GTGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTGGAAGTCACCTGATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGGAGCATAATCGAGTTTaGAGTGTCACGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: VSVATADTVRLDTGVLTLEHNRV*SVTGLS
Trigger: ACTCAAACCCGTGACACTCCAAACTCGATTATGCTC...CAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp AAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAACAAACTGGAGACCGACGGGATaGGCTTCAGGCTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: KCIWNQGMGNDESTKETNWRPTG*ASGSAP
Trigger: CGGCGCCGAGCCTGAAGCTCATCCCGTCGGTCTCCA...GTTTGTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp GCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCTCCTCAAAGAGTAGGTaGTTCGGAAATTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ATADTVRLDTGVLTLHVFSSKSR*FGNCCS
Trigger: GGAGCAGCAATTTCCGAATCACCTACTCTTTGAGGA...GAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp AAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAGTCTGACTGGCCAGAATATCAGGTaGCTTCCACAGACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KWALEHNRVWSVTGLSLTGQNIR*LPQTSE
Trigger: CTCTGAGGTCTGTGGAAGTCACCTGATATTCTGGCC...AGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGGGCCAGACAGAGGACTaGAGCTACAGGACTAGCCTT +
Preference number: 4 (lower is better)
Translates to: RFRKWALEHNRVWSVTGLGQTED*SYRTSL
Trigger: AAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCC...CAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAGCTTAGAAAGTGGGCCCTaGAGCATAATCGAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: KRSGGQTEDWSYRTSLPSLESGP*SIIEFG
Trigger: TCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAA...GCTTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp CTCATCGATAACGCTCACAATTTTCTGCAGCCTGGACTCGTTCACAAAGCCATCTTCTCATCATCCAGCTaGGACTCCTCCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LIDNAHNFLQPGLVHKAIFSSSS*DSSSST
Trigger: GGTGGAGCTGGAGGAGTCTCAGCTGGATGATGAGAA...GATGGCTTTGTGAACGAGTCCAGGCTGCAGAAAATTGTGAGCGTTATCGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600586.1
CDS-3UTR TCA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATTGGACACAGGGGTGCTaGCTCTGCATGTATTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHWTQGC*LCMYSP
Trigger: AGGAGAATACATGCAGAGTCAGCACCCCTGTGTCCA...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp AGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGGGCCAGAATATCAGGTaGCTTCCACAGACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RFRKWALEHNRVWSVTGLGQNIR*LPQTSE
Trigger: CTCTGAGGTCTGTGGAAGTCACCTGATATTCTGGCC...CAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp GAATATCAGGTGACTTCCACAGACCTCAGAGGTGAGTGTGGCGACAGCAGACACCCAGGGCATGGGAAATaGCGAATCCACAAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: EYQVTSTDLRGECGDSRHPGHGK*RIHKRN
Trigger: GTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGG...GTGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTGGAAGTCACCTGATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp AGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGTCCAGCTCCACCCCTTaGCGGCTACCTTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RFRKWALEHNRVWSVTGLSSSTP*RLPFLD
Trigger: ATCAAGAAAAGGTAGCCGGCAAGGGGTGGAGCTGGA...CAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TTTCAAAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAAGCGCCTGGTTATTCATaGGGCCCAGGGGGACCGGGG +
Preference number: 4 (lower is better)
Translates to: FQNVSGTRAWEMTNPQKKAPGYS*GPGGPG
Trigger: CCCCGGTCCCCCTGGGCCCCATGAATAACCAGGCGC...TTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTTTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TTTCAAAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAAAGTCGGGGTCCGGAGTaGAGTCGGTGTCCGGGTCGG +
Preference number: 4 (lower is better)
Translates to: FQNVSGTRAWEMTNPQKKSRGPE*SRCPGR
Trigger: CCGACCCGGACACCGACTCCACTCCGGACCCCGACT...TTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TTTCAAAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAAGAGTCAGGGTCCGGATaGGGGTCCGAGTCCGGACCG +
Preference number: 4 (lower is better)
Translates to: FQNVSGTRAWEMTNPQKKESGSG*GSESGP
Trigger: CGGTCCGGACTCGGACCCCCATCCGGACCCTGACTC...TTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCTTAGAAAGTGGGCCCTaGAGCATAATCGAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: ATADTVRLDTGVLTLHVFLESGP*SIIEFG
Trigger: TCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAA...GAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCTACAGGTTTAGAAAGTaGGCCCTGGAGCATAATCGA +
Preference number: 4 (lower is better)
Translates to: ATADTVRLDTGVLTLHVFYRFRK*ALEHNR
Trigger: TCGATTATGCTCCAGGGCCCACTTTCTAAACCTGTA...GAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp CCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTCATCATCCATGGACACAGGGGTGCTaGCTCTGCATGTATTCTCCT +
Preference number: 4 (lower is better)
Translates to: PPSEKDLTWQHFSPSHHPWTQGC*LCMYSP
Trigger: AGGAGAATACATGCAGAGTCAGCACCCCTGTGTCCA...TGGATGATGAGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp ACTCCTCCAGCTCCACCCCTTGCCGGCTACCTTTTCTTGATTTCCTCATCGATAACGCTCACAATTTTCTaGAGCCTGGACTCGTTCACA +
Preference number: 4 (lower is better)
Translates to: TPPAPPLAGYLFLISSSITLTIF*SLDSFT
Trigger: TGTGAACGAGTCCAGGCTGCAGAAAATTGTGAGCGT...TATCGATGAGGAAATCAAGAAAAGGTAGCCGGCAAGGGGTGGAGCTGGAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600586.1
CDS-3UTR GCA 90 bp TCCACCCCTTGCCGGCTACCTTTTCTTGATTTCCTCATCGATAACGCTCACAATTCCAGCTCCACCCCTTaGCGGCTACCTTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: STPCRLPFLDFLIDNAHNSSSTP*RLPFLD
Trigger: ATCAAGAAAAGGTAGCCGGCAAGGGGTGGAGCTGGA...ATTGTGAGCGTTATCGATGAGGAAATCAAGAAAAGGTAGCCGGCAAGGGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000600586.1
CDS-3UTR CCA 90 bp TTTCAAAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAAAGATGGCCGACGGGATaGTCCCCAGGATGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: FQNVSGTRAWEMTNPQKKRWPTG*SPGWAR
Trigger: CCTCGCCCATCCTGGGGACCATCCCGTCGGCCATCT...TTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTCATCATCCACCCCTCTTCTTGGAATaGACCAGTCTCCCGTTCACA +
Preference number: 4 (lower is better)
Translates to: PPSEKDLTWQHFSPSHHPPLFLE*TSLPFT
Trigger: TGTGAACGGGAGACTGGTCCATTCCAAGAAGAGGGG...TGGATGATGAGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CCTCCAGCTCCACCCCTTGCCGGCTACCTTTTCTTGATTTCCTCATCGATAACGCAATTTTCTGCAGCCTaGACTCGTTCACAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: PPAPPLAGYLFLISSSITQFSAA*TRSQSH
Trigger: ATGGCTTTGTGAACGAGTCCAGGCTGCAGAAAATTG...CGTTATCGATGAGGAAATCAAGAAAAGGTAGCCGGCAAGGGGTGGAGCTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600586.1
CDS-3UTR CCA 90 bp GAATATCAGGTGACTTCCACAGACCTCAGAGGTGAGTGTGGCGACAGCAGACACCAATTTTCTGCAGCCTaGACTCGTTCACAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: EYQVTSTDLRGECGDSRHQFSAA*TRSQSH
Trigger: ATGGCTTTGTGAACGAGTCCAGGCTGCAGAAAATTG...GTGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTGGAAGTCACCTGATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GAATATCAGGTGACTTCCACAGACCTCAGAGGTGAGTGTGGCGACAGCAGACACGAAAAGGACCTGACTTaGCAACATTTCAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: EYQVTSTDLRGECGDSRHEKDLT*QHFSPS
Trigger: AGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTC...GTGTCTGCTGTCGCCACACTCACCTCTGAGGTCTGTGGAAGTCACCTGATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTTACAGGTTTAGAAAGTaGGCCCTGGAGCATAATCGA +
Preference number: 4 (lower is better)
Translates to: QPQPPSEKDLTWQHFSPSYRFRK*ALEHNR
Trigger: TCGATTATGCTCCAGGGCCCACTTTCTAAACCTGTA...AGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATTCCTCAAAGAGTAGGTaGTTCGGAAATTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHSSKSR*FGNCCS
Trigger: GGAGCAGCAATTTCCGAATCACCTACTCTTTGAGGA...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp AGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGCCAGGGCATGGGAAATaGCGAATCCACAAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: RFRKWALEHNRVWSVTGLPGHGK*RIHKRN
Trigger: GTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGG...CAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp CTCACAATTTTCTGCAGCCTGGACTCGTTCACAAAGCCATCACCCCTAAAGAGTCCCCTAAAGAGTAGGTaGTTCGGAAATTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LTIFCSLDSFTKPSPLKSPLKSR*FGNCCS
Trigger: GGAGCAGCAATTTCCGAATCACCTACTCTTTAGGGG...ACTCTTTAGGGGTGATGGCTTTGTGAACGAGTCCAGGCTGCAGAAAATTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600586.1
CDS-3UTR CCA 90 bp GATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCAAATTCTGTAAGGAGATaGCCGACGGGATGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: DLTGLESGPWSIIEFGVSNSVRR*PTGWSP
Trigger: TGGGGACCATCCCGTCGGCCATCTCCTTACAGAATT...TGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TTTCAAAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAAAGACGGAGTCAGGACTaGAGTCAGGGTCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: FQNVSGTRAWEMTNPQKKRRSQD*SQGPDG
Trigger: CCCATCCGGACCCTGACTCCAGTCCTGACTCCGTCT...TTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CTATGTTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGCAATTTTCTGCAGCCTaGACTCGTTCACAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LCCAGWNIDLTGLESGPWQFSAA*TRSQSH
Trigger: ATGGCTTTGTGAACGAGTCCAGGCTGCAGAAAATTG...CCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATCAATTTTCTGCAGCCTaGACTCGTTCACAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHQFSAA*TRSQSH
Trigger: ATGGCTTTGTGAACGAGTCCAGGCTGCAGAAAATTG...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAACAAACCAGGAGCAAGAGGAGTaGAGGCCAGACAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: KCIWNQGMGNDESTKETNQEQEE*RPDRGL
Trigger: CAGTCCTCTGTCTGGCCTCCACTCCTCTTGCTCCTG...GTTTGTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CTATGTTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGTACAGGTTTAGAAAGTaGGCCCTGGAGCATAATCGA +
Preference number: 4 (lower is better)
Translates to: LCCAGWNIDLTGLESGPWYRFRK*ALEHNR
Trigger: TCGATTATGCTCCAGGGCCCACTTTCTAAACCTGTA...CCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp CCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTCATCATCCAGAAAAGGACCTGACTTaGCAACATTTCAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PPSEKDLTWQHFSPSHHPEKDLT*QHFSPS
Trigger: AGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTC...TGGATGATGAGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000600586.1
ENST00000622070.2
CDS-3UTR CCA 90 bp AAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAACAAACGGCCAGACAGAGGACTaGAGCTACAGGACTAGCCTT +
Preference number: 4 (lower is better)
Translates to: KCIWNQGMGNDESTKETNGQTED*SYRTSL
Trigger: AAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCC...GTTTGTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAACAAACCATCACCCCTCTTCTTaGAATGGACCAGTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: KCIWNQGMGNDESTKETNHHPSS*NGPVSR
Trigger: ACGGGAGACTGGTCCATTCCAAGAAGAGGGGTGATG...GTTTGTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp GATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCAGAGCATAATCGAGTTTaGAGTGTCACGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: DLTGLESGPWSIIEFGVSEHNRV*SVTGLS
Trigger: ACTCAAACCCGTGACACTCCAAACTCGATTATGCTC...TGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR TCA 90 bp AAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAACAAACCCAGGGCATGGGAAATaGCGAATCCACAAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: KCIWNQGMGNDESTKETNPGHGK*RIHKRN
Trigger: GTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGG...GTTTGTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR GCA 90 bp AAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAACAAACACGCTCACAATTTTCTaGAGCCTGGACTCGTTCACA +
Preference number: 4 (lower is better)
Translates to: KCIWNQGMGNDESTKETNTLTIF*SLDSFT
Trigger: TGTGAACGAGTCCAGGCTGCAGAAAATTGTGAGCGT...GTTTGTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TACCTTTTCTTGATTTCCTCATCGATAACGCTCACAATTTTCTGCAGCCTGGACGAAAAGGACCTGACTTaGCAACATTTCAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: YLFLISSSITLTIFCSLDEKDLT*QHFSPS
Trigger: AGAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTC...GTCCAGGCTGCAGAAAATTGTGAGCGTTATCGATGAGGAAATCAAGAAAAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600586.1
CDS-3UTR CCA 90 bp GATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCATTTTCAAAATGTATCTaGAACCAGGGCATGGGAAAT +
Preference number: 4 (lower is better)
Translates to: DLTGLESGPWSIIEFGVSFSKCI*NQGMGN
Trigger: ATTTCCCATGCCCTGGTTCCAGATACATTTTGAAAA...TGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp TTTCAAAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAATTAGAAAGTGGGCCCTaGAGCATAATCGAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: FQNVSGTRAWEMTNPQKKLESGP*SIIEFG
Trigger: TCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAA...TTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CCA 90 bp AAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAACAAACTTTTCAAAATGTATCTaGAACCAGGGCATGGGAAAT +
Preference number: 4 (lower is better)
Translates to: KCIWNQGMGNDESTKETNFSKCI*NQGMGN
Trigger: ATTTCCCATGCCCTGGTTCCAGATACATTTTGAAAA...GTTTGTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS CCA 90 bp CCGGACTGGAGGAGTCAGGGTCCGAGCCGGAGTCGGGACCGGAGTTaGGTTCCGGACGGGAACGGGAGTCGGCACCGGAGTAGGGATCCA +
Preference number: 5 (lower is better)
Translates to: PDWRSQGPSRSRDRS*VPDGNGSRHRSRDP
Trigger: TGGATCCCTACTCCGGTGCCGACTCCCGTTCCCGTCCGGAACCCAACTCCGGTCCCGACTCCGGCTCGGACCCTGACTCCTCCAGTCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000597876.1
ENST00000622070.2
CDS-3UTR CAA 90 bp GCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCACCGGGGCAAGCCGGTaGGGGAGTCCCGCCCGCCTT +
Preference number: 5 (lower is better)
Translates to: ATADTVRLDTGVLTLHVFTGASR*GSPARL
Trigger: AAGGCGGGCGGGACTCCCCAACCGGCTTGCCCCGGT...GAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp AAGAGGAGTGGAGGCCAGACAGAGGACTGGAGCTACAGGACTAGCCTTCCAAGCAAGCCCGGACTGAGGTaGAAGTCCGCGCCGAGGAGG +
Preference number: 5 (lower is better)
Translates to: KRSGGQTEDWSYRTSLPSKPGLR*KSAPRR
Trigger: CCTCCTCGGCGCGGACTTCAACCTCAGTCCGGGCTT...GCTTGGAAGGCTAGTCCTGTAGCTCCAGTCCTCTGTCTGGCCTCCACTCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp GCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCATGTATTCAAGCCCGGACTGAGGTaGAAGTCCGCGCCGAGGAGG +
Preference number: 5 (lower is better)
Translates to: ATADTVRLDTGVLTLHVFKPGLR*KSAPRR
Trigger: CCTCCTCGGCGCGGACTTCAACCTCAGTCCGGGCTT...GAATACATGCAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATGCCCGCCTTCCCTCTTaGGGCGGGGAGAGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHARLPS*GGESVS
Trigger: GGAGACGCTCTCCCCGCCCAAAGAGGGAAGGCGGGC...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp CTATGTTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGGCCCGCCTTCCCTCTTaGGGCGGGGAGAGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: LCCAGWNIDLTGLESGPWARLPS*GGESVS
Trigger: GGAGACGCTCTCCCCGCCCAAAGAGGGAAGGCGGGC...CCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAACATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp GTGAGTGTGGCGACAGCAGACACAGTCAGACTGGACACAGGGGTGCTGACTCTGCCATCACCCCTCTTCTaGGAATGGACCAGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: VSVATADTVRLDTGVLTLPSPLF*EWTSLP
Trigger: CGGGAGACTGGTCCATTCCAAGAAGAGGGGTGATGG...CAGAGTCAGCACCCCTGTGTCCAGTCTGACTGTGTCTGCTGTCGCCACACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATAAGCCCGGACTGAGGTaGAAGTCCGCGCCGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHKPGLR*KSAPRR
Trigger: CCTCCTCGGCGCGGACTTCAACCTCAGTCCGGGCTT...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp CCAGCCCCAGCCACCATCAGAAAAGGACCTGACTTGGCAACATTTCAGCCCTTCTGGAGTGTCACGGGTTaGAGTCTGACTGCCATCCCC +
Preference number: 5 (lower is better)
Translates to: PAPATIRKGPDLATFQPFWSVTG*SLTAIP
Trigger: GGGGATGGCAGTCAGACTCAAACCCGTGACACTCCA...GAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCTGATGGTGGCTGGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS CCA 90 bp AGGTCACTCGAATCAGGACCCTCTTGTCCAGCGCGAAGTTCTCGCTaGAGGAGGGGAAGGTTTCCGTACAATTCTGTAAGGAGATGGCCG +
Preference number: 5 (lower is better)
Translates to: RSLESGPSCPARSSR*RRGRFPYNSVRRWP
Trigger: CGGCCATCTCCTTACAGAATTGTACGGAAACCTTCCCCTCCTCCAGCGAGAACTTCGCGCTGGACAAGAGGGTCCTGATTCGAGTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000597876.1
ENST00000600586.1
ENST00000622070.2
CDS-3UTR CAA 90 bp AAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAACAAACACCGGGGCAAGCCGGTaGGGGAGTCCCGCCCGCCTT +
Preference number: 5 (lower is better)
Translates to: KCIWNQGMGNDESTKETNTGASR*GSPARL
Trigger: AAGGCGGGCGGGACTCCCCAACCGGCTTGCCCCGGT...GTTTGTTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp AAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAGTCTGACTCGAATCAGGACCCTCTaGTCCAGCGCGAAGTTCTCG +
Preference number: 5 (lower is better)
Translates to: KWALEHNRVWSVTGLSLTRIRTL*SSAKFS
Trigger: CGAGAACTTCGCGCTGGACAAGAGGGTCCTGATTCG...AGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp AAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGAGTCTGACTCCATCACCCCTCTTCTaGGAATGGACCAGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: KWALEHNRVWSVTGLSLTPSPLF*EWTSLP
Trigger: CGGGAGACTGGTCCATTCCAAGAAGAGGGGTGATGG...AGTCAGACTCAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp TTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATCGAATCAGGACCCTCTaGTCCAGCGCGAAGTTCTCG +
Preference number: 5 (lower is better)
Translates to: LRRLEHRSYRFRKWALEHRIRTL*SSAKFS
Trigger: CGAGAACTTCGCGCTGGACAAGAGGGTCCTGATTCG...ATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp AGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCACGGGTTTGCGAATCAGGACCCTCTaGTCCAGCGCGAAGTTCTCG +
Preference number: 5 (lower is better)
Translates to: RFRKWALEHNRVWSVTGLRIRTL*SSAKFS
Trigger: CGAGAACTTCGCGCTGGACAAGAGGGTCCTGATTCG...CAAACCCGTGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp TTTCAAAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAAGCCCGCCTTCCCTCTTaGGGCGGGGAGAGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: FQNVSGTRAWEMTNPQKKARLPS*GGESVS
Trigger: GGAGACGCTCTCCCCGCCCAAAGAGGGAAGGCGGGC...TTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp TCCACCCCTTGCCGGCTACCTTTTCTTGATTTCCTCATCGATAACGCTCACAATCGAATCAGGACCCTCTaGTCCAGCGCGAAGTTCTCG +
Preference number: 5 (lower is better)
Translates to: STPCRLPFLDFLIDNAHNRIRTL*SSAKFS
Trigger: CGAGAACTTCGCGCTGGACAAGAGGGTCCTGATTCG...ATTGTGAGCGTTATCGATGAGGAAATCAAGAAAAGGTAGCCGGCAAGGGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600586.1
CDS-3UTR CAA 90 bp GATCTTACAGGTTTAGAAAGTGGGCCCTGGAGCATAATCGAGTTTGGAGTGTCATGGAGTGTCACGGGTTaGAGTCTGACTGCCATCCCC +
Preference number: 5 (lower is better)
Translates to: DLTGLESGPWSIIEFGVSWSVTG*SLTAIP
Trigger: GGGGATGGCAGTCAGACTCAAACCCGTGACACTCCA...TGACACTCCAAACTCGATTATGCTCCAGGGCCCACTTTCTAAACCTGTAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp CTATGTTGCGCAGGCTGGAACATAGATCTTACAGGTTTAGAAAGTGGGCCCTGGAGAAAAGGACCTGACTaGGCAACATTTCAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: LCCAGWNIDLTGLESGPWRKGPD*ATFQPF
Trigger: GAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCT...CCAGGGCCCACTTTCTAAACCTGTAAGATCTATGTTCCAGCCTGCGCAACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS-3UTR CAA 90 bp TCCTCATCGATAACGCTCACAATTTTCTGCAGCCTGGACTCGTTCACAAAGCCAAGAAAAGGACCTGACTaGGCAACATTTCAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: SSSITLTIFCSLDSFTKPRKGPD*ATFQPF
Trigger: GAAGGGCTGAAATGTTGCCAAGTCAGGTCCTTTTCT...TGGCTTTGTGAACGAGTCCAGGCTGCAGAAAATTGTGAGCGTTATCGATGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600586.1
CDS-3UTR CAA 90 bp TTTCAAAATGTATCTGGAACCAGGGCATGGGAAATGACGAATCCACAAAAGAAATGGAGTGTCACGGGTTaGAGTCTGACTGCCATCCCC +
Preference number: 5 (lower is better)
Translates to: FQNVSGTRAWEMTNPQKKWSVTG*SLTAIP
Trigger: GGGGATGGCAGTCAGACTCAAACCCGTGACACTCCA...TTTCTTTTGTGGATTCGTCATTTCCCATGCCCTGGTTCCAGATACATTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2
CDS TCA 72 bp CCGGGGCGGGCCCGGCCTCGCTGGAGACCGACGGGATaGGCTTCAGGCTCGGCGCCGGCTCAGGGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: PGRARPRWRPTG*ASGSAPAQGPP
Trigger: AGGAGGACCCTGAGCCGGCGCCGAGCCTGAAGCTCATCCCGTCGGTCTCCAGCGAGGCCGGGCCCGCCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000597876.1
ENST00000622070.2
CDS CCA 72 bp TTTCCGTACAATTCTGTAAGGAGATGGCCGACGGGATaGTCCCCAGGATGGGCGAGGGGACAGGACTGGGAA +
Preference number: 6 (lower is better)
Translates to: FPYNSVRRWPTG*SPGWARGQDWE
Trigger: TTCCCAGTCCTGTCCCCTCGCCCATCCTGGGGACCATCCCGTCGGCCATCTCCTTACAGAATTGTACGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000597876.1
ENST00000600586.1
ENST00000622070.2
CDS CCA 72 bp GAATCAGGACCCTCTTGTCCAGCGCGAAGTTCTCGCTaGAGGAGGGGAAGGTTTCCGTACAATTCTGTAAGG +
Preference number: 6 (lower is better)
Translates to: ESGPSCPARSSR*RRGRFPYNSVR
Trigger: CCTTACAGAATTGTACGGAAACCTTCCCCTCCTCCAGCGAGAACTTCGCGCTGGACAAGAGGGTCCTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000597876.1
ENST00000600586.1
ENST00000622070.2
CDS GCA 72 bp TTCTTGATTTCCTCATCGATAACGCTCACAATTTTCTaGAGCCTGGACTCGTTCACAAAGCCATCACCCCTC +
Preference number: 6 (lower is better)
Translates to: FLISSSITLTIF*SLDSFTKPSPL
Trigger: GAGGGGTGATGGCTTTGTGAACGAGTCCAGGCTGCAGAAAATTGTGAGCGTTATCGATGAGGAAATCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335426.8
ENST00000423711.4
ENST00000622070.2