RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SELENOO (Homo sapiens)

Ensembl gene IDs: ENSG00000073169

Ensembl transcript IDs: ENST00000380903.7, ENST00000492092.1, ENST00000611222.1

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTaGCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCC +
Preference number: 1 (lower is better)
Translates to: SRPQTETGQVLTGCL*HHGKTGVHGPGQNP
Trigger: GGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR CCA 90 bp TGCACTGCTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTaGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: CTAEPASDRDGSGPD*MSLPSWKDGCAWAR
Trigger: CCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAGCAGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR-3UTR CCA 90 bp GAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCACCCACTCAGCAGCACATaGGGGCCTCGGGAGACTCCA +
Preference number: 2 (lower is better)
Translates to: ELLVYLGAWVQPPGTRLHPLSST*GPRETP
Trigger: TGGAGTCTCCCGAGGCCCCCATGTGCTGCTGAGTGG...GTGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR-3UTR CCA 90 bp CTGCTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCAAAGACGGGTGTGCATaGGCCAGGGCAGAATCCCCC +
Preference number: 2 (lower is better)
Translates to: LLSRPQTETGQVLTGCLCKDGCA*ARAESP
Trigger: GGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTT...GCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR-3UTR CCA 90 bp AGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGAAAGACGGGTGTGCATaGGCCAGGGCAGAATCCCCC +
Preference number: 2 (lower is better)
Translates to: RELLVYLGAWVQPPGTRLKDGCA*ARAESP
Trigger: GGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTT...CAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR-3UTR CCA 90 bp TGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATCCACTCAGCAGCACATaGGGGCCTCGGGAGACTCCA +
Preference number: 2 (lower is better)
Translates to: CHHGKTGVHGPGQNPPVYPLSST*GPRETP
Trigger: TGGAGTCTCCCGAGGCCCCCATGTGCTGCTGAGTGG...ATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR-3UTR GCA 90 bp CTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATATGGAAAGACGGGTGTaGATGGGCCAGGGCAGAATC +
Preference number: 2 (lower is better)
Translates to: LSRPQTETGQVLTGCLCHMERRV*MGQGRI
Trigger: GATTCTGCCCTGGCCCATGCACACCCGTCTTTCCAT...ATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR-3UTR CCA 90 bp GAGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTAGCCTGGCATCATCTTaGCCACTCAGCAGCACATGG +
Preference number: 2 (lower is better)
Translates to: EGVAGLFRSLGPAPRDQASLASS*PLSSTW
Trigger: CCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCT...AGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR-3UTR CCA 90 bp AGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGGGGTCAGGTCCTGACTaGATGTCTCTGCCATCATGG +
Preference number: 2 (lower is better)
Translates to: RELLVYLGAWVQPPGTRLGSGPD*MSLPSW
Trigger: CCATGATGGCAGAGACATCCAGTCAGGACCTGACCC...CAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR-3UTR CCA 90 bp TCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTAGCCTGGCATCATCTTaGCCACTCAGCAGCACATGG +
Preference number: 2 (lower is better)
Translates to: SLPSWKDGCAWARAESPSSLASS*PLSSTW
Trigger: CCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCT...ACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR-3UTR CCA 90 bp GAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCAGTGTATAGGGCAGCCTaGCATCATCTTGGCCACTCA +
Preference number: 2 (lower is better)
Translates to: EPASDRDGSGPDWMSLPSVYRAA*HHLGHS
Trigger: TGAGTGGCCAAGATGATGCCAGGCTGCCCTATACAC...TGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR GCA 72 bp CAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTaGCATCATGGAAAGACGGGTGTGCATGGGCCAGGG +
Preference number: 3 (lower is better)
Translates to: QTETGQVLTGCL*HHGKTGVHGPG
Trigger: CCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR CCA 72 bp GAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTaGATGTCTCTGCCATCATGGAAAGACGGGTGTGCA +
Preference number: 3 (lower is better)
Translates to: EPASDRDGSGPD*MSLPSWKDGCA
Trigger: TGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR-3UTR CAA 90 bp TCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTCAGCCTGGCATCATCTaGGCCACTCAGCAGCACATG +
Preference number: 3 (lower is better)
Translates to: SLPSWKDGCAWARAESPSQPGII*ATQQHM
Trigger: CATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTG...ACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
3UTR-3UTR CAA 90 bp CCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCACAGCCTGGCATCATCTaGGCCACTCAGCAGCACATG +
Preference number: 3 (lower is better)
Translates to: PDWMSLPSWKDGCAWARAQPGII*ATQQHM
Trigger: CATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTG...TGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp TGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCTCGTGGGCTGCACGCGGGTaGAGCAGGCCCCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: CIGQPGIILATQQHMGASWAARG*SRPRAR
Trigger: CCGTGCCCGGGGCCTGCTTCACCCGCGTGCAGCCCA...CGAGGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp TGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCTCGCCGTGGACTCGGACGTaGCGCAGGCGCCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: CIGQPGIILATQQHMGASPWTRT*RRRRPV
Trigger: CACGGGCCGGCGCCTGCGTCACGTCCGAGTCCACGG...CGAGGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp CTGCTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCACCCGCCGCACCTCTaGGAAGTCCCCGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: LLSRPQTETGQVLTGCLCHPPHL*EVPALG
Trigger: GCCGAGCGCGGGGACTTCTCAGAGGTGCGGCGGGTG...GCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp GAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCACTGGGCCCGGCGCCCTTaGGCTGCAGCTCCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: ELLVYLGAWVQPPGTRLHWARRP*AAAPSA
Trigger: AGCGCTGGGAGCTGCAGCTCAAGGGCGCCGGGCCCA...GTGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp GATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCCGTGGACTCGGACGTaGCGCAGGCGCCGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: DVSAIMERRVCMGQGRIPPWTRT*RRRRPV
Trigger: CACGGGCCGGCGCCTGCGTCACGTCCGAGTCCACGG...GGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCACCGGCGCCCTTGAGCTaGAGCTCCCAGCGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: GVAGLFRSLGPAPRDQAAPAPLS*SSQRSP
Trigger: CGGCGAGCGCTGGGAGCTGCAGCTCAAGGGCGCCGG...TGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCCCACCATCCGCGCCGTaGGCCGCGTCACCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGAPPSAP*AASPPG
Trigger: TCCGGGAGGTGACGCGGCGCACGGCGCGGATGGTGG...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp CTGCTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCCTCGCCCAGGTACATaGCGGCGCCGTCGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLSRPQTETGQVLTGCLCPRPGT*RRRRPA
Trigger: AGCTGGGCGACGGCGCCGCCATGTACCTGGGCGAGG...GCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp CTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATTGGCCTCGGCGTCTGTaGCGGCCCCCGCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: LSRPQTETGQVLTGCLCHWPRRL*RPPPRS
Trigger: ACTGCGAGGCGGGGGCCGCCACAGACGCCGAGGCCA...ATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp GAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCACGGAGCGCGTTGCCGCTaGAGAACAGCGCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ELLVYLGAWVQPPGTRLHGARCR*RTARPR
Trigger: CCGAGGCCGCGCTGTTCTTCAGCGGCAACGCGCTCC...GTGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp TCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTCACCCGCCGCACCTCTaGGAAGTCCCCGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: SLPSWKDGCAWARAESPSHPPHL*EVPALG
Trigger: GCCGAGCGCGGGGACTTCTCAGAGGTGCGGCGGGTG...ACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCGGCGCCCTTGAGCTaGAGCTCCCAGCGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: GCLCHHGKTGVHGPGQNPPAPLS*SSQRSP
Trigger: CGGCGAGCGCTGGGAGCTGCAGCTCAAGGGCGCCGG...GGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp TGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCTCGCGCACGTGCTCAGCCTaGCAGGCGGCAGCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: CIGQPGIILATQQHMGASRTCSA*QAAASP
Trigger: TGGGGACGCTGCCGCCTGGCAGGCTGAGCACGTGCG...CGAGGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CTGCTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCCCCAGGGACCAGGCTaGACTGCTGAGCCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LLSRPQTETGQVLTGCLCPQGPG*TAEPAS
Trigger: TGAGGCCGGCTCAGCAGTGCAGCCTGGTCCCTGGGG...GCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GAGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTCACGCTCCAGCTCCCTaGCGATGCCTGCCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: EGVAGLFRSLGPAPRDQAHAPAP*RCLPGC
Trigger: GCACCCGGGCAGGCATCGCCAGGGAGCTGGAGCGTG...AGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp TGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCACCCCGTCGGCTTCCGTaGCCTCGGCGTCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: CLCHHGKTGVHGPGQNPPPRRLP*PRRLWR
Trigger: CCGCCACAGACGCCGAGGCCACGGAAGCCGACGGGG...TGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp ACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTTGGGCTGCACGCGGGTaGAGCAGGCCCCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: TETGQVLTGCLCHHGKTGWAARG*SRPRAR
Trigger: CCGTGCCCGGGGCCTGCTTCACCCGCGTGCAGCCCA...ACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp GGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGGAGCGCGTTGCCGCTaGAGAACAGCGCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GPDWMSLPSWKDGCAWARGARCR*RTARPR
Trigger: CCGAGGCCGCGCTGTTCTTCAGCGGCAACGCGCTCC...CCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp ATCCCCCAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGCGCAGCGGGGTGGGCTaGACGCGGGTGAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: IPQCIGQPGIILATQQHMRSGVG*TRVKQA
Trigger: GGCCTGCTTCACCCGCGTGCAGCCCACCCCGCTGCG...CATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTGGGGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCGCCGTCGCCCAGCTaGCCGGCGAACTGGCCGAAT +
Preference number: 4 (lower is better)
Translates to: GPDWMSLPSWKDGCAWARAPSPS*PANWPN
Trigger: ATTCGGCCAGTTCGCCGGGCAGCTGGGCGACGGCGC...CCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGGCTCGCCGGTCGCCGTaGACACCTCGCCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: VSAIMERRVCMGQGRIPQARRSP*TPRPGT
Trigger: TGTACCTGGGCGAGGTGTGCACGGCGACCGGCGAGC...CTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCACCCCCACGCTGGGGCCTaGACGCCCTGTGTGCTCATC +
Preference number: 4 (lower is better)
Translates to: ELLVYLGAWVQPPGTRLHPHAGA*TPCVLI
Trigger: GATGAGCACACAGGGCGTGCAGGCCCCAGCGTGGGG...GTGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp TGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATCCACCATCCGCGCCGTaGGCCGCGTCACCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: CHHGKTGVHGPGQNPPVYPPSAP*AASPPG
Trigger: TCCGGGAGGTGACGCGGCGCACGGCGCGGATGGTGG...ATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp AGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCTCCCTGGCGATGCCTaGCCGGGTGCCCATAAGCGC +
Preference number: 4 (lower is better)
Translates to: RELLVYLGAWVQPPGTRLLPGDA*PGAHKR
Trigger: GCGCTTATGGGCACCCGGGCAGGCATCGCCAGGGAG...CAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGCGCACGTGCTCAGCCTaGCAGGCGGCAGCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GPDWMSLPSWKDGCAWARRTCSA*QAAASP
Trigger: TGGGGACGCTGCCGCCTGGCAGGCTGAGCACGTGCG...CCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CTGCTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCTGCATCACGCGCACGTaGTCAGCCTGCCAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LLSRPQTETGQVLTGCLCCITRT*SACQAA
Trigger: TGCCGCCTGGCAGGCTGAGCACGTGCGCGTGATGCA...GCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp TGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCTCGTGTAGGAGCGCTGCCTaGCGTCCGCCCCGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: CIGQPGIILATQQHMGASCRSAA*RPPRRL
Trigger: AAGCCGACGGGGCGGACGGCAGGCAGCGCTCCTACA...CGAGGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGTAGGAGCGCTGCCTaGCGTCCGCCCCGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: EPASDRDGSGPDWMSLPSCRSAA*RPPRRL
Trigger: AAGCCGACGGGGCGGACGGCAGGCAGCGCTCCTACA...TGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCCTCGCCCAGGTACATaGCGGCGCCGTCGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: DVSAIMERRVCMGQGRIPPRPGT*RRRRPA
Trigger: AGCTGGGCGACGGCGCCGCCATGTACCTGGGCGAGG...GGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCGACCGTCGGCCTGTCTaGAGAAGGGCGTGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GCLCHHGKTGVHGPGQNPDRRPV*RRAWAR
Trigger: CCGGGCCCACGCCCTTCTCCAGACAGGCCGACGGTC...GGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCACTGCCGGGGATCCATCTaGGGCCGGAAGGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ELLVYLGAWVQPPGTRLHCRGSI*GRKASL
Trigger: GAGGCTGGCCTTCCGGCCCCAGATGGATCCCCGGCA...GTGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp TCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCTGGCCTCGGCGTCTGTaGCGGCCCCCGCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: SGPDWMSLPSWKDGCAWAWPRRL*RPPPRS
Trigger: ACTGCGAGGCGGGGGCCGCCACAGACGCCGAGGCCA...GGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp TCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCCCCCGTCGGCTTCCGTaGCCTCGGCGTCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SGPDWMSLPSWKDGCAWAPRRLP*PRRLWR
Trigger: CCGCCACAGACGCCGAGGCCACGGAAGCCGACGGGG...GGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp ACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATCGCAGCGGGGTGGGCTaGACGCGGGTGAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TGQVLTGCLCHHGKTGVHRSGVG*TRVKQA
Trigger: GGCCTGCTTCACCCGCGTGCAGCCCACCCCGCTGCG...ATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCGCTCGCCGGTCGCCGTaGACACCTCGCCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: DVSAIMERRVCMGQGRIPARRSP*TPRPGT
Trigger: TGTACCTGGGCGAGGTGTGCACGGCGACCGGCGAGC...GGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp TCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTCCCCACGCTGGGGCCTaGACGCCCTGTGTGCTCATC +
Preference number: 4 (lower is better)
Translates to: SLPSWKDGCAWARAESPSPHAGA*TPCVLI
Trigger: GATGAGCACACAGGGCGTGCAGGCCCCAGCGTGGGG...ACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATACACCTCGGGCTGCTTaGTGTACGCGTAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: LSRPQTETGQVLTGCLCHTPRAA*CTRSGR
Trigger: CCGGCCGCTACGCGTACAGCAAGCAGCCCGAGGTGT...ATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CTGCTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCTCCGCAGGTTCCACCTaGACACCTCGGGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LLSRPQTETGQVLTGCLCSAGST*TPRAAC
Trigger: GCAAGCAGCCCGAGGTGTGCAGGTGGAACCTGCGGA...GCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCAGGGGCAGTTCCGGCTaGAGGGCCTCGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DVSAIMERRVCMGQGRIPRGSSG*RASASF
Trigger: GAAGCTGGCCGAGGCCCTGCAGCCGGAACTGCCCCT...GGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CTGCTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCTCCAGCCGAGACTGCTaGTCCACACGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLSRPQTETGQVLTGCLCSSRDC*STRSSS
Trigger: GGAGCTGGAGCGTGTGGAGCAGCAGTCTCGGCTGGA...GCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCAAGCTGCCCGGCGAACTaGCCGAATTGGTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GVAGLFRSLGPAPRDQAASCPAN*PNWWPQ
Trigger: CTGCGGCCACCAATTCGGCCAGTTCGCCGGGCAGCT...TGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp AGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGAGCTGCCCGGCGAACTaGCCGAATTGGTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: RELLVYLGAWVQPPGTRLSCPAN*PNWWPQ
Trigger: CTGCGGCCACCAATTCGGCCAGTTCGCCGGGCAGCT...CAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGCGCCGGCCCGTGTGGTaGGGACTCCCAGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: GPDWMSLPSWKDGCAWARRRPVW*GLPGGT
Trigger: TGTTCCACCTGGGAGTCCCCACCACACGGGCCGGCG...CCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGCGTTCCTCCCCACGCTaGGGCCTGCACGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GPDWMSLPSWKDGCAWARRSSPR*GLHALC
Trigger: ACACAGGGCGTGCAGGCCCCAGCGTGGGGAGGAACG...CCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp TGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCACGTTCCTCCCCACGCTaGGGCCTGCACGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: CLCHHGKTGVHGPGQNPPRSSPR*GLHALC
Trigger: ACACAGGGCGTGCAGGCCCCAGCGTGGGGAGGAACG...TGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp ATCCCCCAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGCACGCTCCAGCTCCCTaGCGATGCCTGCCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: IPQCIGQPGIILATQQHMHAPAP*RCLPGC
Trigger: GCACCCGGGCAGGCATCGCCAGGGAGCTGGAGCGTG...CATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTGGGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp CTGCTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCGAGACTCCAGGGGTGTaGAGCGTGCCGAGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: LLSRPQTETGQVLTGCLCETPGV*SVPRPL
Trigger: TAACGGCCTCGGCACGCTCCACACCCCTGGAGTCTC...GCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp CTGCTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCCACTCAGCAGCACATaGGGGCCTCGGGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LLSRPQTETGQVLTGCLCPLSST*GPRETP
Trigger: TGGAGTCTCCCGAGGCCCCCATGTGCTGCTGAGTGG...GCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCACCAGGCTGCACTGCTaGGCCGGCCTCAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGATRLHC*AGLRQR
Trigger: TCTCTGTCTGAGGCCGGCTCAGCAGTGCAGCCTGGT...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCGAAGCCCCGAGCGCTaGCCTGTATACGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: DVSAIMERRVCMGQGRIPRSPER*PVYGHP
Trigger: CGGATGGCCGTATACAGGGCAGCGCTCGGGGCTTCG...GGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp AGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGTCCGCAGGTTCCACCTaGACACCTCGGGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RELLVYLGAWVQPPGTRLSAGST*TPRAAC
Trigger: GCAAGCAGCCCGAGGTGTGCAGGTGGAACCTGCGGA...CAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GAGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTTCCAGGGAGGCACACTaGTCCATCAGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EGVAGLFRSLGPAPRDQASREAH*SISLAR
Trigger: CCTGGCCAGGCTGATGGAGCAGTGTGCCTCCCTGGA...AGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCATCCAGCCGAGACTGCTaGTCCACACGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVAGLFRSLGPAPRDQAASSRDC*STRSSS
Trigger: GGAGCTGGAGCGTGTGGAGCAGCAGTCTCGGCTGGA...TGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATTGCTCCAGCCGAGACTaGTGCTCCACACGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSRPQTETGQVLTGCLCHCSSRD*CSTRSS
Trigger: GCTGGAGCGTGTGGAGCAGCAGTCTCGGCTGGAGCA...ATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTCTGCCGCACTCAGCTaGTCCAGCCGAGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VSAIMERRVCMGQGRIPQSAALS*SSRDCC
Trigger: GCAGCAGTCTCGGCTGGAGCAGCTGAGTGCGGCAGA...CTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCACCTGCTCTGCAGCTCTaGCGCACTCAGCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EPASDRDGSGPDWMSLPSPALQL*RTQLLQ
Trigger: CTGGAGCAGCTGAGTGCGGCAGAGCTGCAGAGCAGG...TGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCACCCTGCTCTGCAGCTCTaGCGCACTCAGCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ELLVYLGAWVQPPGTRLHPALQL*RTQLLQ
Trigger: CTGGAGCAGCTGAGTGCGGCAGAGCTGCAGAGCAGG...GTGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCAGTGGCCCTGGTTCCTaGTCTGCAGCTCTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGASGPGS*SAALPH
Trigger: GTGCGGCAGAGCTGCAGAGCAGGAACCAGGGCCACT...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp TCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTTGCATCACGCGCACGTaGTCAGCCTGCCAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SLPSWKDGCAWARAESPSCITRT*SACQAA
Trigger: TGCCGCCTGGCAGGCTGAGCACGTGCGCGTGATGCA...ACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCAGAGCGGGGGCTTACTaGTGTAGGAGCGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGARAGAY*CRSAAC
Trigger: GCAGGCAGCGCTCCTACAGCAGTAAGCCCCCGCTCT...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCACAGAGCGGGGGCTTACTaGTGTAGGAGCGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ELLVYLGAWVQPPGTRLHRAGAY*CRSAAC
Trigger: GCAGGCAGCGCTCCTACAGCAGTAAGCCCCCGCTCT...GTGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCGCCGGCCCGTGTGGTaGGGACTCCCAGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: GQVLTGCLCHHGKTGVHGRRPVW*GLPGGT
Trigger: TGTTCCACCTGGGAGTCCCCACCACACGGGCCGGCG...CCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp ACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTAGGCGCCGGCCCGTGTaGTGGGGACTCCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TETGQVLTGCLCHHGKTGRRRPV*WGLPGG
Trigger: TCCACCTGGGAGTCCCCACCACACGGGCCGGCGCCT...ACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp ACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATAGGCGCCGGCCCGTGTaGTGGGGACTCCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TGQVLTGCLCHHGKTGVHRRRPV*WGLPGG
Trigger: TCCACCTGGGAGTCCCCACCACACGGGCCGGCGCCT...ATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp CTGCTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCTCAGCCCAGTGGCCCTaGTTCCTGCTCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLSRPQTETGQVLTGCLCSAQWP*FLLCSS
Trigger: AGAGCTGCAGAGCAGGAACCAGGGCCACTGGGCTGA...GCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCCCACTCAGCAGCACATaGGGGCCTCGGGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGAPLSST*GPRETP
Trigger: TGGAGTCTCCCGAGGCCCCCATGTGCTGCTGAGTGG...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp CATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATAGGACGCTGTCGCTGGCATaGGCAGCCTGGATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: HHGKTGVHGPGQNPPVYRTLSLA*AAWISG
Trigger: CCCCGAGATCCAGGCTGCTCATGCCAGCGACAGCGT...CCTATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp CTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATGCCCGTAGTCGATGGTaGGCCCCAGGATGCTCATGT +
Preference number: 4 (lower is better)
Translates to: LSRPQTETGQVLTGCLCHARSRW*APGCSC
Trigger: ACATGAGCATCCTGGGGCTCACCATCGACTACGGGC...ATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp CTGCTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCGAACAGCTGCGGGTTTaGCTGCGCCAGCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: LLSRPQTETGQVLTGCLCEQLRV*LRQHQH
Trigger: ATGCTGATGCTGGCGCAGTCAAACCCGCAGCTGTTC...GCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp TCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCCGAAGCCCCGAGCGCTaGCCTGTATACGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: SGPDWMSLPSWKDGCAWARSPER*PVYGHP
Trigger: CGGATGGCCGTATACAGGGCAGCGCTCGGGGCTTCG...GGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATTGACCGTAGGACCTTaGGACCGTCGGCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: EPASDRDGSGPDWMSLPSLTVGP*DRRPVW
Trigger: CCAGACAGGCCGACGGTCGCAAGGTCCTACGGTCAA...TGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATAGGACACCTCGGGCTGCTTaGTGTACGCGTAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: HHGKTGVHGPGQNPPVYRTPRAA*CTRSGR
Trigger: CCGGCCGCTACGCGTACAGCAAGCAGCCCGAGGTGT...CCTATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp ACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATAGGGGCAGTTCCGGCTaGAGGGCCTCGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TGQVLTGCLCHHGKTGVHRGSSG*RASASF
Trigger: GAAGCTGGCCGAGGCCCTGCAGCCGGAACTGCCCCT...ATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp ACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATCTCCCTGGCGATGCCTaGCCGGGTGCCCATAAGCGC +
Preference number: 4 (lower is better)
Translates to: TGQVLTGCLCHHGKTGVHLPGDA*PGAHKR
Trigger: GCGCTTATGGGCACCCGGGCAGGCATCGCCAGGGAG...ATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGCACGCACAGTTCTGCTaGCCAGAGCGGGGGCTTACT +
Preference number: 4 (lower is better)
Translates to: VSAIMERRVCMGQGRIPQHAQFC*PERGLT
Trigger: AGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTG...CTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCCACGCACAGTTCTGCTaGCCAGAGCGGGGGCTTACT +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGAHAQFC*PERGLT
Trigger: AGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTG...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCATGTCACGCACAGTTCTaGTGCCCAGAGCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GVAGLFRSLGPAPRDQAACHAQF*CPERGL
Trigger: AAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGACA...TGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GAGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTCAGGGGTGTGGAGCGTaGCGAGGCCGTTACGAAGAT +
Preference number: 4 (lower is better)
Translates to: EGVAGLFRSLGPAPRDQAQGCGA*RGRYED
Trigger: ATCTTCGTAACGGCCTCGGCACGCTCCACACCCCTG...AGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp ACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATCCCCAGGGACCAGGCTaGACTGCTGAGCCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TGQVLTGCLCHHGKTGVHPQGPG*TAEPAS
Trigger: TGAGGCCGGCTCAGCAGTGCAGCCTGGTCCCTGGGG...ATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GAGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGTGTTGAGCACGCCGTaGCAGAAGCCCACACACTGC +
Preference number: 4 (lower is better)
Translates to: EGVAGLFRSLGPAPRDQAVLSTP*QKPTHC
Trigger: GCAGTGTGTGGGCTTCTGCCACGGCGTGCTCAACAC...AGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCGTGTTGAGCACGCCGTaGCAGAAGCCCACACACTGC +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGAVLSTP*QKPTHC
Trigger: GCAGTGTGTGGGCTTCTGCCACGGCGTGCTCAACAC...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GAGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGAGGCATTGCACACGTaGTCGGGGTCGTACCTGTCC +
Preference number: 4 (lower is better)
Translates to: EGVAGLFRSLGPAPRDQAEALHT*SGSYLS
Trigger: GGACAGGTACGACCCCGACCACGTGTGCAATGCCTC...AGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp TGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCTCGTGGTCTCCAGGAGCTTaGACACCAGCGCCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: CIGQPGIILATQQHMGASWSPGA*TPAPRL
Trigger: AAGACGGGGCGCTGGTGTCCAAGCTCCTGGAGACCA...CGAGGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GAGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTTGGTCTCCAGGAGCTTaGACACCAGCGCCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: EGVAGLFRSLGPAPRDQAWSPGA*TPAPRL
Trigger: AAGACGGGGCGCTGGTGTCCAAGCTCCTGGAGACCA...AGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGACTGCTCCATCAGCCTaGCCAGGAATTCCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VSAIMERRVCMGQGRIPQTAPSA*PGIPPG
Trigger: GCCTGGCGGAATTCCTGGCCAGGCTGATGGAGCAGT...CTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp ACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATTGCCGGGGATCCATCTaGGGCCGGAAGGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TGQVLTGCLCHHGKTGVHCRGSI*GRKASL
Trigger: GAGGCTGGCCTTCCGGCCCCAGATGGATCCCCGGCA...ATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCTCAGCCCAGTGGCCCTaGTTCCTGCTCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGASAQWP*FLLCSS
Trigger: AGAGCTGCAGAGCAGGAACCAGGGCCACTGGGCTGA...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCGAGACTCCAGGGGTGTaGAGCGTGCCGAGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: GCLCHHGKTGVHGPGQNPETPGV*SVPRPL
Trigger: TAACGGCCTCGGCACGCTCCACACCCCTGGAGTCTC...GGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGAAAGACGGGTGTGCATaGGCCAGGGCAGAATCCCCC +
Preference number: 4 (lower is better)
Translates to: VSAIMERRVCMGQGRIPQKDGCA*ARAESP
Trigger: GGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTT...CTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp ACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTACGCTGTCGCTGGCATaGGCAGCCTGGATCTCGGGG +
Preference number: 4 (lower is better)
Translates to: TETGQVLTGCLCHHGKTGTLSLA*AAWISG
Trigger: CCCCGAGATCCAGGCTGCTCATGCCAGCGACAGCGT...ACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp GAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCACAGACGGGTCAGGTCCTaGCTGGATGTCTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: ELLVYLGAWVQPPGTRLHRRVRS*LDVSAI
Trigger: GATGGCAGAGACATCCAGTCAGGACCTGACCCGTCT...GTGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp TGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATACCAGGCTGCACTGCTaGGCCGGCCTCAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: CHHGKTGVHGPGQNPPVYTRLHC*AGLRQR
Trigger: TCTCTGTCTGAGGCCGGCTCAGCAGTGCAGCCTGGT...ATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCGAGGCCCAGCTTCCTaGGCATCTTCTGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: LSRPQTETGQVLTGCLCHRGPAS*ASSAGS
Trigger: ACTACCTGCAGAAGATGCGCAGGAAGCTGGGCCTCG...ATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATAGGTCCAGGGAGGCACACTaGTCCATCAGCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HHGKTGVHGPGQNPPVYRSREAH*SISLAR
Trigger: CCTGGCCAGGCTGATGGAGCAGTGTGCCTCCCTGGA...CCTATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCACATAAGCGCGAACAGCTaGGGGTTTGACTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: ELLVYLGAWVQPPGTRLHISANS*GFDCAS
Trigger: GCTGGCGCAGTCAAACCCGCAGCTGTTCGCGCTTAT...GTGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp TGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATTGCTCCAGCCGAGACTaGTGCTCCACACGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CHHGKTGVHGPGQNPPVYCSSRD*CSTRSS
Trigger: GCTGGAGCGTGTGGAGCAGCAGTCTCGGCTGGAGCA...ATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATAGGTCTGCCGCACTCAGCTaGTCCAGCCGAGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: HHGKTGVHGPGQNPPVYRSAALS*SSRDCC
Trigger: GCAGCAGTCTCGGCTGGAGCAGCTGAGTGCGGCAGA...CCTATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp TCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCCCCTGGTTCCTGCTCTaGAGCTCTGCCGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: SGPDWMSLPSWKDGCAWAPWFLL*SSAALS
Trigger: GCTGAGTGCGGCAGAGCTGCAGAGCAGGAACCAGGG...GGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp TCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGTGGCCCTGGTTCCTaGTCTGCAGCTCTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: SGPDWMSLPSWKDGCAWASGPGS*SAALPH
Trigger: GTGCGGCAGAGCTGCAGAGCAGGAACCAGGGCCACT...GGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GAGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTTTCGGGTTGTTGGCGTaGATCACGCGCACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: EGVAGLFRSLGPAPRDQAFGLLA*ITRTCS
Trigger: TGAGCACGTGCGCGTGATGCACGCCAACAACCCGAA...AGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCTTCGGGTTGTTGGCGTaGATCACGCGCACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGAFGLLA*ITRTCS
Trigger: TGAGCACGTGCGCGTGATGCACGCCAACAACCCGAA...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCAGGGGTGTGGAGCGTaGCGAGGCCGTTACGAAGAT +
Preference number: 4 (lower is better)
Translates to: GCLCHHGKTGVHGPGQNPQGCGA*RGRYED
Trigger: ATCTTCGTAACGGCCTCGGCACGCTCCACACCCCTG...GGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCTCTGCACGCTGTCGCTaGCATGAGCAGCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGASARCR*HEQPGS
Trigger: AGATCCAGGCTGCTCATGCCAGCGACAGCGTGCAGA...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCAGCTCGGCAGCCTCGATaGCATTCTGCGCGATGTAGT +
Preference number: 4 (lower is better)
Translates to: GVAGLFRSLGPAPRDQAAARQPR*HSARCS
Trigger: ACTACATCGCGCAGAATGCCATCGAGGCTGCCGAGC...TGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCAAAGACGGGTGTGCATaGGCCAGGGCAGAATCCCCC +
Preference number: 4 (lower is better)
Translates to: DVSAIMERRVCMGQGRIPKDGCA*ARAESP
Trigger: GGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTT...GGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp GGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCTCATGTTGTCGGTGTTaGGCACGCCGTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GCLCHHGKTGVHGPGQNPSCCRC*ARRGRS
Trigger: GCTTCTGCCACGGCGTGCTCAACACCGACAACATGA...GGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp TCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCGCCCGTAGTCGATGGTaGGCCCCAGGATGCTCATGT +
Preference number: 4 (lower is better)
Translates to: SGPDWMSLPSWKDGCAWAARSRW*APGCSC
Trigger: ACATGAGCATCCTGGGGCTCACCATCGACTACGGGC...GGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp CCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAACAGCTGCGGGTTTaGCTGCGCCAGCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: PDWMSLPSWKDGCAWARAEQLRV*LRQHQH
Trigger: ATGCTGATGCTGGCGCAGTCAAACCCGCAGCTGTTC...TGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp GATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCAGACGGGTCAGGTCCTaGCTGGATGTCTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: DVSAIMERRVCMGQGRIPRRVRS*LDVSAI
Trigger: GATGGCAGAGACATCCAGTCAGGACCTGACCCGTCT...GGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATAGGTTGACCGTAGGACCTTaGGACCGTCGGCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: HHGKTGVHGPGQNPPVYRLTVGP*DRRPVW
Trigger: CCAGACAGGCCGACGGTCGCAAGGTCCTACGGTCAA...CCTATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGAGCTGCGGGTTTGACTaGGCCAGCATCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: VSAIMERRVCMGQGRIPQSCGFD*ASISIM
Trigger: CATGATGCTGATGCTGGCGCAGTCAAACCCGCAGCT...CTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp ACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTCCCTGGTTCCTGCTCTaGAGCTCTGCCGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: TETGQVLTGCLCHHGKTGPWFLL*SSAALS
Trigger: GCTGAGTGCGGCAGAGCTGCAGAGCAGGAACCAGGG...ACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp TGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATTGTCACGCACAGTTCTaGTGCCCAGAGCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: CHHGKTGVHGPGQNPPVYCHAQF*CPERGL
Trigger: AAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGACA...ATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCATGGAAAGACGGGTGTaGATGGGCCAGGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGAMERRV*MGQGRI
Trigger: GATTCTGCCCTGGCCCATGCACACCCGTCTTTCCAT...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp TCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTGGGGACTCCCAGGTaGAACATGGCTTCGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SLPSWKDGCAWARAESPSVGTPR*NMASLH
Trigger: ATGCAGCGAAGCCATGTTCCACCTGGGAGTCCCCAC...ACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGTGGGGACTCCCAGGTaGAACATGGCTTCGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GPDWMSLPSWKDGCAWARVGTPR*NMASLH
Trigger: ATGCAGCGAAGCCATGTTCCACCTGGGAGTCCCCAC...CCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCTCTGCACGCTGTCGCTaGCATGAGCAGCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: DVSAIMERRVCMGQGRIPSARCR*HEQPGS
Trigger: AGATCCAGGCTGCTCATGCCAGCGACAGCGTGCAGA...GGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp TCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCACTGCTCCATCAGCCTaGCCAGGAATTCCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SGPDWMSLPSWKDGCAWATAPSA*PGIPPG
Trigger: GCCTGGCGGAATTCCTGGCCAGGCTGATGGAGCAGT...GGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGCCAGCATCAGCATCATaGATAGCTGCCGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: VSAIMERRVCMGQGRIPQPASAS*IAAGDP
Trigger: TGGATCCCCGGCAGCTATCCATGATGCTGATGCTGG...CTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGCGTACTTCGGGTTGTTaGCGTGCATCACGCGCACGT +
Preference number: 4 (lower is better)
Translates to: GPDWMSLPSWKDGCAWARRTSGC*RASRAR
Trigger: ACGTGCGCGTGATGCACGCCAACAACCCGAAGTACG...CCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp AGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGAGCCTGGCATCATCTTaGCCACTCAGCAGCACATGG +
Preference number: 4 (lower is better)
Translates to: RELLVYLGAWVQPPGTRLSLASS*PLSSTW
Trigger: CCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCT...CAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp TGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCTCGAGCCTGGCATCATCTTaGCCACTCAGCAGCACATGG +
Preference number: 4 (lower is better)
Translates to: CIGQPGIILATQQHMGASSLASS*PLSSTW
Trigger: CCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCT...CGAGGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCACGGGTCAGGTCCTGACTaGATGTCTCTGCCATCATGG +
Preference number: 4 (lower is better)
Translates to: ELLVYLGAWVQPPGTRLHGSGPD*MSLPSW
Trigger: CCATGATGGCAGAGACATCCAGTCAGGACCTGACCC...GTGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATAGGTGTTGTCGGAGGCATTaGACACGTGGTCGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: HHGKTGVHGPGQNPPVYRCCRRH*TRGRGR
Trigger: ACGACCCCGACCACGTGTGCAATGCCTCCGACAACA...CCTATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp TGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATCGAGGCCCAGCTTCCTaGGCATCTTCTGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: CHHGKTGVHGPGQNPPVYRGPAS*ASSAGS
Trigger: ACTACCTGCAGAAGATGCGCAGGAAGCTGGGCCTCG...ATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATAGGATAAGCGCGAACAGCTaGGGGTTTGACTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: HHGKTGVHGPGQNPPVYRISANS*GFDCAS
Trigger: GCTGGCGCAGTCAAACCCGCAGCTGTTCGCGCTTAT...CCTATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp ACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGAGGCATTGCACACGTaGTCGGGGTCGTACCTGTCC +
Preference number: 4 (lower is better)
Translates to: TGQVLTGCLCHHGKTGVHEALHT*SGSYLS
Trigger: GGACAGGTACGACCCCGACCACGTGTGCAATGCCTC...ATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp CCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCACCAGCATCAGCATCATaGATAGCTGCCGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: PDWMSLPSWKDGCAWARAPASAS*IAAGDP
Trigger: TGGATCCCCGGCAGCTATCCATGATGCTGATGCTGG...TGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp TCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCCGTACTTCGGGTTGTTaGCGTGCATCACGCGCACGT +
Preference number: 4 (lower is better)
Translates to: SGPDWMSLPSWKDGCAWARTSGC*RASRAR
Trigger: ACGTGCGCGTGATGCACGCCAACAACCCGAAGTACG...GGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGGCTCGGCAGCCTCGATaGCATTCTGCGCGATGTAGT +
Preference number: 4 (lower is better)
Translates to: GQVLTGCLCHHGKTGVHGARQPR*HSARCS
Trigger: ACTACATCGCGCAGAATGCCATCGAGGCTGCCGAGC...CCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GAGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGTGTATAGGGCAGCCTaGCATCATCTTGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: EGVAGLFRSLGPAPRDQAVYRAA*HHLGHS
Trigger: TGAGTGGCCAAGATGATGCCAGGCTGCCCTATACAC...AGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp AGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGGTGTATAGGGCAGCCTaGCATCATCTTGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: RELLVYLGAWVQPPGTRLVYRAA*HHLGHS
Trigger: TGAGTGGCCAAGATGATGCCAGGCTGCCCTATACAC...CAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp ACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATTCATGTTGTCGGTGTTaGGCACGCCGTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: TGQVLTGCLCHHGKTGVHSCCRC*ARRGRS
Trigger: GCTTCTGCCACGGCGTGCTCAACACCGACAACATGA...ATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCGGAACATGGCTTCGCTaGATAGAAACTCCCGGATGC +
Preference number: 4 (lower is better)
Translates to: DVSAIMERRVCMGQGRIPGTWLR*IETPGC
Trigger: GCATCCGGGAGTTTCTATGCAGCGAAGCCATGTTCC...GGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCCCTGCACGCCCTGTGTaGTCATCTGCAGACTTAAAA +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGAPARPV*SSADLK
Trigger: TTTTAAGTCTGCAGATGAGCACACAGGGCGTGCAGG...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp ACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATTGTTGTCGGAGGCATTaGACACGTGGTCGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: TGQVLTGCLCHHGKTGVHCCRRH*TRGRGR
Trigger: ACGACCCCGACCACGTGTGCAATGCCTCCGACAACA...ATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp TCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGCTGCGGGTTTGACTaGGCCAGCATCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: SGPDWMSLPSWKDGCAWASCGFD*ASISIM
Trigger: CATGATGCTGATGCTGGCGCAGTCAAACCCGCAGCT...GGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGATGGAAAGACGGGTGTaGATGGGCCAGGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: GQVLTGCLCHHGKTGVHGMERRV*MGQGRI
Trigger: GATTCTGCCCTGGCCCATGCACACCCGTCTTTCCAT...CCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCCTCCCAGGTGGAACATaGCTTCGCTGCATAGAAACT +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGALPGGT*LRCIET
Trigger: AGTTTCTATGCAGCGAAGCCATGTTCCACCTGGGAG...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp CAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCATGTCTCTGCCATCATaGAAAGACGGGTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: QCIGQPGIILATQQHMGAMSLPS*KDGCAW
Trigger: CCATGCACACCCGTCTTTCCATGATGGCAGAGACAT...GGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp ATCCCCCAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGTCAGGTCCTGACTaGATGTCTCTGCCATCATGG +
Preference number: 4 (lower is better)
Translates to: IPQCIGQPGIILATQQHMGSGPD*MSLPSW
Trigger: CCATGATGGCAGAGACATCCAGTCAGGACCTGACCC...CATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp GATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCAGTAGAAGGTGTTTGTaGAGTCGGCACCGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: DVSAIMERRVCMGQGRIPSRRCL*SRHRSD
Trigger: ATCTGACCGGTGCCGACTTCACAAACACCTTCTACT...GGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAATAGAAACTCCCGGATaGTTGACCGTAGGACCTTGC +
Preference number: 4 (lower is better)
Translates to: PDWMSLPSWKDGCAWARAIETPG*LTVGPC
Trigger: GCAAGGTCCTACGGTCAAGCATCCGGGAGTTTCTAT...TGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp TGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATGGAACATGGCTTCGCTaGATAGAAACTCCCGGATGC +
Preference number: 4 (lower is better)
Translates to: CHHGKTGVHGPGQNPPVYGTWLR*IETPGC
Trigger: GCATCCGGGAGTTTCTATGCAGCGAAGCCATGTTCC...ATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp CCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCACTCCCAGGTGGAACATaGCTTCGCTGCATAGAAACT +
Preference number: 4 (lower is better)
Translates to: PDWMSLPSWKDGCAWARALPGGT*LRCIET
Trigger: AGTTTCTATGCAGCGAAGCCATGTTCCACCTGGGAG...TGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CCA 90 bp GGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCATGTCTCTGCCATCATaGAAAGACGGGTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: GCLCHHGKTGVHGPGQNPMSLPS*KDGCAW
Trigger: CCATGCACACCCGTCTTTCCATGATGGCAGAGACAT...GGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp GAGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTAGGATCCAAACCTTATaGAAGTGGAAGCTACACGCA +
Preference number: 4 (lower is better)
Translates to: EGVAGLFRSLGPAPRDQARIQTL*KWKLHA
Trigger: TGCGTGTAGCTTCCACTTTCATAAGGTTTGGATCCT...AGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp GGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGAGTAGAAGGTGTTTGTaGAGTCGGCACCGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: GQVLTGCLCHHGKTGVHGSRRCL*SRHRSD
Trigger: ATCTGACCGGTGCCGACTTCACAAACACCTTCTACT...CCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp ACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTATAGAAACTCCCGGATaGTTGACCGTAGGACCTTGC +
Preference number: 4 (lower is better)
Translates to: TETGQVLTGCLCHHGKTGIETPG*LTVGPC
Trigger: GCAAGGTCCTACGGTCAAGCATCCGGGAGTTTCTAT...ACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR TCA 90 bp GGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGAGGATCCAAACCTTATaGAAGTGGAAGCTACACGCA +
Preference number: 4 (lower is better)
Translates to: GQVLTGCLCHHGKTGVHGRIQTL*KWKLHA
Trigger: TGCGTGTAGCTTCCACTTTCATAAGGTTTGGATCCT...CCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp GATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCACGCAACACAACCGTaGATTGTTCATATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: DVSAIMERRVCMGQGRIPHATQP*IVHIWD
Trigger: ATCCCAAATATGAACAATGCACGGTTGTGTTGCGTG...GGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR GCA 90 bp CATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATAGGCACGCAACACAACCGTaGATTGTTCATATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: HHGKTGVHGPGQNPPVYRHATQP*IVHIWD
Trigger: ATCCCAAATATGAACAATGCACGGTTGTGTTGCGTG...CCTATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 90 bp CCGTCGGCCTGTCTGGAGAAGGGCGTGGGCCCGGCGCCCTTGAGCTaGAGCTCCCAGCGCTCGCCGGTCGCCGTGCACACCTCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PSACLEKGVGPAPLS*SSQRSPVAVHTSPR
Trigger: CCTGGGCGAGGTGTGCACGGCGACCGGCGAGCGCTGGGAGCTGCAGCTCAAGGGCGCCGGGCCCACGCCCTTCTCCAGACAGGCCGACGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS TCA 90 bp TGCGACCGTCGGCCTGTCTGGAGAAGGGCGTGGGCCCGGCGCCCTTaGGCTGCAGCTCCCAGCGCTCGCCGGTCGCCGTGCACACCTCGC +
Preference number: 5 (lower is better)
Translates to: CDRRPVWRRAWARRP*AAAPSARRSPCTPR
Trigger: GCGAGGTGTGCACGGCGACCGGCGAGCGCTGGGAGCTGCAGCTCAAGGGCGCCGGGCCCACGCCCTTCTCCAGACAGGCCGACGGTCGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS CCA 90 bp GCTCCCAGCGCTCGCCGGTCGCCGTGCACACCTCGCCCAGGTACATaGCGGCGCCGTCGCCCAGCTGCCCGGCGAACTGGCCGAATTGGT +
Preference number: 5 (lower is better)
Translates to: APSARRSPCTPRPGT*RRRRPAARRTGRIG
Trigger: ACCAATTCGGCCAGTTCGCCGGGCAGCTGGGCGACGGCGCCGCCATGTACCTGGGCGAGGTGTGCACGGCGACCGGCGAGCGCTGGGAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 90 bp GTTCTGCTGCCCAGAGCGGGGGCTTACTGCTGTAGGAGCGCTGCCTaGCGTCCGCCCCGTCGGCTTCCGTGGCCTCGGCGTCTGTGGCGG +
Preference number: 5 (lower is better)
Translates to: VLLPRAGAYCCRSAA*RPPRRLPWPRRLWR
Trigger: CCGCCACAGACGCCGAGGCCACGGAAGCCGACGGGGCGGACGGCAGGCAGCGCTCCTACAGCAGTAAGCCCCCGCTCTGGGCAGCAGAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 90 bp TCCTCGGCCAGGATGGCCTCCCCCAGCTCCAGGGGCAGTTCCGGCTaGAGGGCCTCGGCCAGCTTCCGCAGGTTCCACCTGCACACCTCG +
Preference number: 5 (lower is better)
Translates to: SSARMASPSSRGSSG*RASASFRRFHLHTS
Trigger: CGAGGTGTGCAGGTGGAACCTGCGGAAGCTGGCCGAGGCCCTGCAGCCGGAACTGCCCCTGGAGCTGGGGGAGGCCATCCTGGCCGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 90 bp CTCATGTTGTCGGTGTTGAGCACGCCGTGGCAGAAGCCCACACACTaGCACTCGGCCACCATCCGCGCCGTGCGCCGCGTCACCTCCCGG +
Preference number: 5 (lower is better)
Translates to: LMLSVLSTPWQKPTH*HSATIRAVRRVTSR
Trigger: CCGGGAGGTGACGCGGCGCACGGCGCGGATGGTGGCCGAGTGGCAGTGTGTGGGCTTCTGCCACGGCGTGCTCAACACCGACAACATGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 90 bp GCCCAGTGGCCCTGGTTCCTGCTCTGCAGCTCTGCCGCACTCAGCTaGTCCAGCCGAGACTGCTGCTCCACACGCTCCAGCTCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: AQWPWFLLCSSAALS*SSRDCCSTRSSSLA
Trigger: CGCCAGGGAGCTGGAGCGTGTGGAGCAGCAGTCTCGGCTGGAGCAGCTGAGTGCGGCAGAGCTGCAGAGCAGGAACCAGGGCCACTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 90 bp TTCCTCAGCACGTACTTCGGGTTGTTGGCGTGCATCACGCGCACGTaGTCAGCCTGCCAGGCGGCAGCGTCCCCAGCGCCTTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: FLSTYFGLLACITRT*SACQAAASPAPSRS
Trigger: GGACCTGGAAGGCGCTGGGGACGCTGCCGCCTGGCAGGCTGAGCACGTGCGCGTGATGCACGCCAACAACCCGAAGTACGTGCTGAGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 90 bp ACGAAGATGTCACGCACAGTTCTGCTGCCCAGAGCGGGGGCTTACTaGTGTAGGAGCGCTGCCTGCCGTCCGCCCCGTCGGCTTCCGTGG +
Preference number: 5 (lower is better)
Translates to: TKMSRTVLLPRAGAY*CRSAACRPPRRLPW
Trigger: CCACGGAAGCCGACGGGGCGGACGGCAGGCAGCGCTCCTACAGCAGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGACATCTTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611222.1
CDS GCA 90 bp CCTCGGCCAGCTTCCGCAGGTTCCACCTGCACACCTCGGGCTGCTTaGTGTACGCGTAGCGGCCGGTGTTGTCGGAGGCATTGCACACGT +
Preference number: 5 (lower is better)
Translates to: PRPASAGSTCTPRAA*CTRSGRCCRRHCTR
Trigger: ACGTGTGCAATGCCTCCGACAACACCGGCCGCTACGCGTACAGCAAGCAGCCCGAGGTGTGCAGGTGGAACCTGCGGAAGCTGGCCGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 90 bp GGGCTCTGTACGCCTGTAGCCAGTCAGCCCAGTGGCCCTGGTTCCTaGTCTGCAGCTCTGCCGCACTCAGCTGCTCCAGCCGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: GLCTPVASQPSGPGS*SAALPHSAAPAETA
Trigger: AGCAGTCTCGGCTGGAGCAGCTGAGTGCGGCAGAGCTGCAGAGCAGGAACCAGGGCCACTGGGCTGACTGGCTACAGGCGTACAGAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 90 bp AAGATCATGTCACGCACAGTTCTGCTGCCCAGAGCGGGGGCTTACTaGTGTAGGAGCGCTGCCTGCCGTCCGCCCCGTCGGCTTCCGTGG +
Preference number: 5 (lower is better)
Translates to: KIMSRTVLLPRAGAY*CRSAACRPPRRLPW
Trigger: CCACGGAAGCCGACGGGGCGGACGGCAGGCAGCGCTCCTACAGCAGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGACATGATCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000492092.1
CDS CCA 90 bp AGGCCAGCCTCAGCTCCTCCAGGGAGGCACACTGCTCCATCAGCCTaGCCAGGAATTCCGCCAGGCCTGGCGACTCTAGCTCCACTGGGA +
Preference number: 5 (lower is better)
Translates to: RPASAPPGRHTAPSA*PGIPPGLATLAPLG
Trigger: TCCCAGTGGAGCTAGAGTCGCCAGGCCTGGCGGAATTCCTGGCCAGGCTGATGGAGCAGTGTGCCTCCCTGGAGGAGCTGAGGCTGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS CCA 90 bp TCCTTGTCCAGCCGGGCTCTGTACGCCTGTAGCCAGTCAGCCCAGTaGCCCTGGTTCCTGCTCTGCAGCTCTGCCGCACTCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SLSSRALYACSQSAQ*PWFLLCSSAALSCS
Trigger: GGAGCAGCTGAGTGCGGCAGAGCTGCAGAGCAGGAACCAGGGCCACTGGGCTGACTGGCTACAGGCGTACAGAGCCCGGCTGGACAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS-3UTR CAA 90 bp GAGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTCCCGGCAGGAGCGCGTaGCCGCTGAAGAACAGCGCG +
Preference number: 5 (lower is better)
Translates to: EGVAGLFRSLGPAPRDQAPGRSA*PLKNSA
Trigger: CGCGCTGTTCTTCAGCGGCAACGCGCTCCTGCCGGG...AGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS TCA 90 bp GATTACCATCATAGAACACGTCGCGCACCACCGTGGACTCGGACGTaGCGCAGGCGCCGGCCCGTGTGGTGGGGACTCCCAGGTGGAACA +
Preference number: 5 (lower is better)
Translates to: DYHHRTRRAPPWTRT*RRRRPVWWGLPGGT
Trigger: TGTTCCACCTGGGAGTCCCCACCACACGGGCCGGCGCCTGCGTCACGTCCGAGTCCACGGTGGTGCGCGACGTGTTCTATGATGGTAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 90 bp AGCTCCCTGGCGATGCCTGCCCGGGTGCCCATAAGCGCGAACAGCTaGGGGTTTGACTGCGCCAGCATCAGCATCATGGATAGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: SSLAMPARVPISANS*GFDCASISIMDSCR
Trigger: CCGGCAGCTATCCATGATGCTGATGCTGGCGCAGTCAAACCCGCAGCTGTTCGCGCTTATGGGCACCCGGGCAGGCATCGCCAGGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 90 bp TGGAGCGTGCCGAGGCCGTTACGAAGATGTCACGCACAGTTCTGCTaGCCAGAGCGGGGGCTTACTGCTGTAGGAGCGCTGCCTGCCGTC +
Preference number: 5 (lower is better)
Translates to: WSVPRPLRRCHAQFC*PERGLTAVGALPAV
Trigger: GACGGCAGGCAGCGCTCCTACAGCAGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGACATCTTCGTAACGGCCTCGGCACGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611222.1
CDS GCA 90 bp GTGTGGAGCGTGCCGAGGCCGTTACGAAGATGTCACGCACAGTTCTaGTGCCCAGAGCGGGGGCTTACTGCTGTAGGAGCGCTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: VWSVPRPLRRCHAQF*CPERGLTAVGALPA
Trigger: GGCAGGCAGCGCTCCTACAGCAGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGACATCTTCGTAACGGCCTCGGCACGCTCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611222.1
CDS CCA 90 bp TCGGACGTGACGCAGGCGCCGGCCCGTGTGGTGGGGACTCCCAGGTaGAACATGGCTTCGCTGCATAGAAACTCCCGGATGCTTGACCGT +
Preference number: 5 (lower is better)
Translates to: SDVTQAPARVVGTPR*NMASLHRNSRMLDR
Trigger: ACGGTCAAGCATCCGGGAGTTTCTATGCAGCGAAGCCATGTTCCACCTGGGAGTCCCCACCACACGGGCCGGCGCCTGCGTCACGTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS CCA 90 bp ATGGTGAGCCCCAGGATGCTCATGTTGTCGGTGTTGAGCACGCCGTaGCAGAAGCCCACACACTGCCACTCGGCCACCATCCGCGCCGTG +
Preference number: 5 (lower is better)
Translates to: MVSPRMLMLSVLSTP*QKPTHCHSATIRAV
Trigger: CACGGCGCGGATGGTGGCCGAGTGGCAGTGTGTGGGCTTCTGCCACGGCGTGCTCAACACCGACAACATGAGCATCCTGGGGCTCACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS-3UTR CAA 90 bp TCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTCCCGGCAGGAGCGCGTaGCCGCTGAAGAACAGCGCG +
Preference number: 5 (lower is better)
Translates to: SLPSWKDGCAWARAESPSPGRSA*PLKNSA
Trigger: CGCGCTGTTCTTCAGCGGCAACGCGCTCCTGCCGGG...ACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 90 bp CGCCGGCCCGTGTGGTGGGGACTCCCAGGTGGAACATGGCTTCGCTaGATAGAAACTCCCGGATGCTTGACCGTAGGACCTTGCGACCGT +
Preference number: 5 (lower is better)
Translates to: RRPVWWGLPGGTWLR*IETPGCLTVGPCDR
Trigger: ACGGTCGCAAGGTCCTACGGTCAAGCATCCGGGAGTTTCTATGCAGCGAAGCCATGTTCCACCTGGGAGTCCCCACCACACGGGCCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 90 bp AGCGTGCCGAGGCCGTTACGAAGATCATGTCACGCACAGTTCTGCTaGCCAGAGCGGGGGCTTACTGCTGTAGGAGCGCTGCCTGCCGTC +
Preference number: 5 (lower is better)
Translates to: SVPRPLRRSCHAQFC*PERGLTAVGALPAV
Trigger: GACGGCAGGCAGCGCTCCTACAGCAGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGACATGATCTTCGTAACGGCCTCGGCACGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000492092.1
CDS GCA 90 bp TGGAGCGTGCCGAGGCCGTTACGAAGATCATGTCACGCACAGTTCTaGTGCCCAGAGCGGGGGCTTACTGCTGTAGGAGCGCTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: WSVPRPLRRSCHAQF*CPERGLTAVGALPA
Trigger: GGCAGGCAGCGCTCCTACAGCAGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGACATGATCTTCGTAACGGCCTCGGCACGCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000492092.1
CDS-3UTR CAA 90 bp CTGCTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCGGCGAACTGGCCGAATaGGTGGCCGCAGTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: LLSRPQTETGQVLTGCLCGELAE*VAAVAV
Trigger: CACTGCTACTGCGGCCACCAATTCGGCCAGTTCGCC...GCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp GAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCAGCGCCTTCCAGGTCCTaGTCCAGCCGGGCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: EPASDRDGSGPDWMSLPSAPSRS*SSRALY
Trigger: GTACAGAGCCCGGCTGGACAAGGACCTGGAAGGCGC...TGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 90 bp GCGCCCCGTCTTCCTCCAGCTCCACCTGCACGAGGCCCAGCTTCCTaGGCATCTTCTGCAGGTAGTGCCTTTGGAACTCGGCGTCAAACT +
Preference number: 5 (lower is better)
Translates to: APRLPPAPPARGPAS*ASSAGSAFGTRRQT
Trigger: AGTTTGACGCCGAGTTCCAAAGGCACTACCTGCAGAAGATGCGCAGGAAGCTGGGCCTCGTGCAGGTGGAGCTGGAGGAAGACGGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 90 bp ATGCCTGCCCGGGTGCCCATAAGCGCGAACAGCTGCGGGTTTGACTaGGCCAGCATCAGCATCATGGATAGCTGCCGGGGATCCATCTGG +
Preference number: 5 (lower is better)
Translates to: MPARVPISANSCGFD*ASISIMDSCRGSIW
Trigger: CCAGATGGATCCCCGGCAGCTATCCATGATGCTGATGCTGGCGCAGTCAAACCCGCAGCTGTTCGCGCTTATGGGCACCCGGGCAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS CCA 90 bp TGGCATTCTGCGCGATGTAGTTCCTCAGCACGTACTTCGGGTTGTTaGCGTGCATCACGCGCACGTGCTCAGCCTGCCAGGCGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: WHSARCSSSARTSGC*RASRARAQPARRQR
Trigger: ACGCTGCCGCCTGGCAGGCTGAGCACGTGCGCGTGATGCACGCCAACAACCCGAAGTACGTGCTGAGGAACTACATCGCGCAGAATGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS-3UTR CAA 90 bp GAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCACCTTGACCGTAGGACCTaGCGACCGTCGGCCTGTCTG +
Preference number: 5 (lower is better)
Translates to: ELLVYLGAWVQPPGTRLHLDRRT*RPSACL
Trigger: CAGACAGGCCGACGGTCGCAAGGTCCTACGGTCAAG...GTGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp GAGGGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGTGTTGTCGGAGGCATaGCACACGTGGTCGGGGTCG +
Preference number: 5 (lower is better)
Translates to: EGVAGLFRSLGPAPRDQAVLSEA*HTWSGS
Trigger: CGACCCCGACCACGTGTGCAATGCCTCCGACAACAC...AGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp TCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGCGCCTTCCAGGTCCTaGTCCAGCCGGGCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: SLPSWKDGCAWARAESPSAPSRS*SSRALY
Trigger: GTACAGAGCCCGGCTGGACAAGGACCTGGAAGGCGC...ACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp GGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGTGTTGTCGGAGGCATaGCACACGTGGTCGGGGTCG +
Preference number: 5 (lower is better)
Translates to: GPDWMSLPSWKDGCAWARVLSEA*HTWSGS
Trigger: CGACCCCGACCACGTGTGCAATGCCTCCGACAACAC...CCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp GGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCATGGTCTCCAGGAGCTaGGACACCAGCGCCCCGTCT +
Preference number: 5 (lower is better)
Translates to: GCLCHHGKTGVHGPGQNPMVSRS*DTSAPS
Trigger: AGACGGGGCGCTGGTGTCCAAGCTCCTGGAGACCAT...GGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp CTGAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCGAACAGCTGCGGGTTaGACTGCGCCAGCATCAGCA +
Preference number: 5 (lower is better)
Translates to: LSRPQTETGQVLTGCLCHRTAAG*TAPASA
Trigger: TGCTGATGCTGGCGCAGTCAAACCCGCAGCTGTTCG...ATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp GGAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCAAGCACGTACTTCGGGTaGTTGGCGTGCATCACGCGC +
Preference number: 5 (lower is better)
Translates to: GVAGLFRSLGPAPRDQAASTYFG*LACITR
Trigger: GCGCGTGATGCACGCCAACAACCCGAAGTACGTGCT...TGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 90 bp GGACTCCCAGGTGGAACATGGCTTCGCTGCATAGAAACTCCCGGATaGTTGACCGTAGGACCTTGCGACCGTCGGCCTGTCTGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: GLPGGTWLRCIETPG*LTVGPCDRRPVWRR
Trigger: CCTTCTCCAGACAGGCCGACGGTCGCAAGGTCCTACGGTCAAGCATCCGGGAGTTTCTATGCAGCGAAGCCATGTTCCACCTGGGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp ATCCCCCAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGCGAACTGGCCGAATaGGTGGCCGCAGTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: IPQCIGQPGIILATQQHMGELAE*VAAVAV
Trigger: CACTGCTACTGCGGCCACCAATTCGGCCAGTTCGCC...CATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp TGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCTCGGAAACTCCCGGATGCTaGACCGTAGGACCTTGCGAC +
Preference number: 5 (lower is better)
Translates to: CIGQPGIILATQQHMGASETPGC*TVGPCD
Trigger: GTCGCAAGGTCCTACGGTCAAGCATCCGGGAGTTTC...CGAGGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp GAGTTGCTGGTTTATTTAGGAGCCTGGGTCCAGCCCCCAGGGACCAGGCTGCACCTCATGTTGTCGGTGTaGAGCACGCCGTGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: ELLVYLGAWVQPPGTRLHLMLSV*STPWQK
Trigger: CTTCTGCCACGGCGTGCTCAACACCGACAACATGAG...GTGCAGCCTGGTCCCTGGGGGCTGGACCCAGGCTCCTAAATAAACCAGCAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp TGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATATGGTCTCCAGGAGCTaGGACACCAGCGCCCCGTCT +
Preference number: 5 (lower is better)
Translates to: CHHGKTGVHGPGQNPPVYMVSRS*DTSAPS
Trigger: AGACGGGGCGCTGGTGTCCAAGCTCCTGGAGACCAT...ATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp GATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCGAACAGCTGCGGGTTaGACTGCGCCAGCATCAGCA +
Preference number: 5 (lower is better)
Translates to: DVSAIMERRVCMGQGRIPRTAAG*TAPASA
Trigger: TGCTGATGCTGGCGCAGTCAAACCCGCAGCTGTTCG...GGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp GGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGACGTACTTCGGGTTGTaGGCGTGCATCACGCGCACG +
Preference number: 5 (lower is better)
Translates to: GPDWMSLPSWKDGCAWARTYFGL*ACITRT
Trigger: CGTGCGCGTGATGCACGCCAACAACCCGAAGTACGT...CCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp GGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGAGCACGTACTTCGGGTaGTTGGCGTGCATCACGCGC +
Preference number: 5 (lower is better)
Translates to: GPDWMSLPSWKDGCAWARSTYFG*LACITR
Trigger: GCGCGTGATGCACGCCAACAACCCGAAGTACGTGCT...CCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp GAGCCGGCCTCAGACAGAGACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCACAGCCTGGCATCATCTaGGCCACTCAGCAGCACATG +
Preference number: 5 (lower is better)
Translates to: EPASDRDGSGPDWMSLPSQPGII*ATQQHM
Trigger: CATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTG...TGATGGCAGAGACATCCAGTCAGGACCTGACCCGTCTCTGTCTGAGGCCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp GTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGCAGCCTGGCATCATCTaGGCCACTCAGCAGCACATG +
Preference number: 5 (lower is better)
Translates to: VSAIMERRVCMGQGRIPQQPGII*ATQQHM
Trigger: CATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTG...CTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp TGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGAAACTCCCGGATGCTaGACCGTAGGACCTTGCGAC +
Preference number: 5 (lower is better)
Translates to: CLCHHGKTGVHGPGQNPPETPGC*TVGPCD
Trigger: GTCGCAAGGTCCTACGGTCAAGCATCCGGGAGTTTC...TGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp TGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTGTATCCCAGGATGCTCATGTaGTCGGTGTTGAGCACGCCG +
Preference number: 5 (lower is better)
Translates to: CHHGKTGVHGPGQNPPVYPRMLM*SVLSTP
Trigger: CGGCGTGCTCAACACCGACAACATGAGCATCCTGGG...ATACACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp TCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCCCCAGGATGCTCATGTaGTCGGTGTTGAGCACGCCG +
Preference number: 5 (lower is better)
Translates to: SGPDWMSLPSWKDGCAWAPRMLM*SVLSTP
Trigger: CGGCGTGCTCAACACCGACAACATGAGCATCCTGGG...GGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp ATCCCCCAGTGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGACGTACTTCGGGTTGTaGGCGTGCATCACGCGCACG +
Preference number: 5 (lower is better)
Translates to: IPQCIGQPGIILATQQHMTYFGL*ACITRT
Trigger: CGTGCGCGTGATGCACGCCAACAACCCGAAGTACGT...CATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACACTGGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp TCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCCTCATGTTGTCGGTGTaGAGCACGCCGTGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: SGPDWMSLPSWKDGCAWALMLSV*STPWQK
Trigger: CTTCTGCCACGGCGTGCTCAACACCGACAACATGAG...GGCCCATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp TCTCTGCCATCATGGAAAGACGGGTGTGCATGGGCCAGGGCAGAATCCCCCAGTCTGCAGGTAGTGCCTTaGGAACTCGGCGTCAAACTC +
Preference number: 5 (lower is better)
Translates to: SLPSWKDGCAWARAESPSLQVVP*ELGVKL
Trigger: GAGTTTGACGCCGAGTTCCAAAGGCACTACCTGCAG...ACTGGGGGATTCTGCCCTGGCCCATGCACACCCGTCTTTCCATGATGGCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp ACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATCTGCAGGTAGTGCCTTaGGAACTCGGCGTCAAACTC +
Preference number: 5 (lower is better)
Translates to: TGQVLTGCLCHHGKTGVHLQVVP*ELGVKL
Trigger: GAGTTTGACGCCGAGTTCCAAAGGCACTACCTGCAG...ATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp TGTATAGGGCAGCCTGGCATCATCTTGGCCACTCAGCAGCACATGGGGGCCTCGCAACACAACCGTGCATaGTTCATATTTGGGATTACC +
Preference number: 5 (lower is better)
Translates to: CIGQPGIILATQQHMGASQHNRA*FIFGIT
Trigger: GGTAATCCCAAATATGAACAATGCACGGTTGTGTTG...CGAGGCCCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS-3UTR CAA 90 bp ACGGGTCAGGTCCTGACTGGATGTCTCTGCCATCATGGAAAGACGGGTGTGCATCAACACAACCGTGCATaGTTCATATTTGGGATTACC +
Preference number: 5 (lower is better)
Translates to: TGQVLTGCLCHHGKTGVHQHNRA*FIFGIT
Trigger: GGTAATCCCAAATATGAACAATGCACGGTTGTGTTG...ATGCACACCCGTCTTTCCATGATGGCAGAGACATCCAGTCAGGACCTGACCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS CAA 72 bp CAGTGCGCGGCGGGCTCGGCGCCCGGCAGGAGCGCGTaGCCGCTGAAGAACAGCGCGGCCTCGGCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: QCAAGSAPGRSA*PLKNSAASASA
Trigger: GGCCGAGGCCGAGGCCGCGCTGTTCTTCAGCGGCAACGCGCTCCTGCCGGGCGCCGAGCCCGCCGCGCACTG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS CAA 90 bp GTACATGGCGGCGCCGTCGCCCAGCTGCCCGGCGAACTGGCCGAATaGGTGGCCGCAGTAGCAGTGCGCGGCGGGCTCGGCGCCCGGCAG +
Preference number: 6 (lower is better)
Translates to: VHGGAVAQLPGELAE*VAAVAVRGGLGARQ
Trigger: CTGCCGGGCGCCGAGCCCGCCGCGCACTGCTACTGCGGCCACCAATTCGGCCAGTTCGCCGGGCAGCTGGGCGACGGCGCCGCCATGTAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS CAA 72 bp GGCGCCGTCGCCCAGCTGCCCGGCGAACTGGCCGAATaGGTGGCCGCAGTAGCAGTGCGCGGCGGGCTCGGC +
Preference number: 6 (lower is better)
Translates to: GAVAQLPGELAE*VAAVAVRGGLG
Trigger: GCCGAGCCCGCCGCGCACTGCTACTGCGGCCACCAATTCGGCCAGTTCGCCGGGCAGCTGGGCGACGGCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 72 bp CAAGAGTCGGGCAGCCGCGAGCGAAGCCCCGAGCGCTaGCCTGTATACGGCCATCCGCGGCCCCGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: QESGSRERSPER*PVYGHPRPRSR
Trigger: GCGGGAGCGGGGCCGCGGATGGCCGTATACAGGGCAGCGCTCGGGGCTTCGCTCGCGGCTGCCCGACTCTTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 72 bp TGTCTGGAGAAGGGCGTGGGCCCGGCGCCCTTGAGCTaGAGCTCCCAGCGCTCGCCGGTCGCCGTGCACACC +
Preference number: 6 (lower is better)
Translates to: CLEKGVGPAPLS*SSQRSPVAVHT
Trigger: GGTGTGCACGGCGACCGGCGAGCGCTGGGAGCTGCAGCTCAAGGGCGCCGGGCCCACGCCCTTCTCCAGACA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 72 bp CCCAGAGCGGGGGCTTACTGCTGTAGGAGCGCTGCCTaGCGTCCGCCCCGTCGGCTTCCGTGGCCTCGGCGT +
Preference number: 6 (lower is better)
Translates to: PRAGAYCCRSAA*RPPRRLPWPRR
Trigger: ACGCCGAGGCCACGGAAGCCGACGGGGCGGACGGCAGGCAGCGCTCCTACAGCAGTAAGCCCCCGCTCTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS CAA 90 bp TTGCGACCGTCGGCCTGTCTGGAGAAGGGCGTGGGCCCGGCGCCCTaGAGCTGCAGCTCCCAGCGCTCGCCGGTCGCCGTGCACACCTCG +
Preference number: 6 (lower is better)
Translates to: LRPSACLEKGVGPAP*SCSSQRSPVAVHTS
Trigger: CGAGGTGTGCACGGCGACCGGCGAGCGCTGGGAGCTGCAGCTCAAGGGCGCCGGGCCCACGCCCTTCTCCAGACAGGCCGACGGTCGCAA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 72 bp AGGATGGCCTCCCCCAGCTCCAGGGGCAGTTCCGGCTaGAGGGCCTCGGCCAGCTTCCGCAGGTTCCACCTG +
Preference number: 6 (lower is better)
Translates to: RMASPSSRGSSG*RASASFRRFHL
Trigger: CAGGTGGAACCTGCGGAAGCTGGCCGAGGCCCTGCAGCCGGAACTGCCCCTGGAGCTGGGGGAGGCCATCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 72 bp GGGTTGTTGGCGTGCATCACGCGCACGTGCTCAGCCTaGCAGGCGGCAGCGTCCCCAGCGCCTTCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: GLLACITRTCSA*QAAASPAPSRS
Trigger: GGACCTGGAAGGCGCTGGGGACGCTGCCGCCTGGCAGGCTGAGCACGTGCGCGTGATGCACGCCAACAACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS TCA 72 bp CATAGAACACGTCGCGCACCACCGTGGACTCGGACGTaGCGCAGGCGCCGGCCCGTGTGGTGGGGACTCCCA +
Preference number: 6 (lower is better)
Translates to: HRTRRAPPWTRT*RRRRPVWWGLP
Trigger: TGGGAGTCCCCACCACACGGGCCGGCGCCTGCGTCACGTCCGAGTCCACGGTGGTGCGCGACGTGTTCTATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 72 bp TCACGCACAGTTCTGCTGCCCAGAGCGGGGGCTTACTaGTGTAGGAGCGCTGCCTGCCGTCCGCCCCGTCGG +
Preference number: 6 (lower is better)
Translates to: SRTVLLPRAGAY*CRSAACRPPRR
Trigger: CCGACGGGGCGGACGGCAGGCAGCGCTCCTACAGCAGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 72 bp ACGTACTTCGGGTTGTTGGCGTGCATCACGCGCACGTaGTCAGCCTGCCAGGCGGCAGCGTCCCCAGCGCCT +
Preference number: 6 (lower is better)
Translates to: TYFGLLACITRT*SACQAAASPAP
Trigger: AGGCGCTGGGGACGCTGCCGCCTGGCAGGCTGAGCACGTGCGCGTGATGCACGCCAACAACCCGAAGTACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS CAA 72 bp TGCCAGGCGGCAGCGTCCCCAGCGCCTTCCAGGTCCTaGTCCAGCCGGGCTCTGTACGCCTGTAGCCAGTCA +
Preference number: 6 (lower is better)
Translates to: CQAAASPAPSRS*SSRALYACSQS
Trigger: TGACTGGCTACAGGCGTACAGAGCCCGGCTGGACAAGGACCTGGAAGGCGCTGGGGACGCTGCCGCCTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 72 bp CCCTGGTTCCTGCTCTGCAGCTCTGCCGCACTCAGCTaGTCCAGCCGAGACTGCTGCTCCACACGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PWFLLCSSAALS*SSRDCCSTRSS
Trigger: GCTGGAGCGTGTGGAGCAGCAGTCTCGGCTGGAGCAGCTGAGTGCGGCAGAGCTGCAGAGCAGGAACCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS CCA 72 bp AGCCGGGCTCTGTACGCCTGTAGCCAGTCAGCCCAGTaGCCCTGGTTCCTGCTCTGCAGCTCTGCCGCACTC +
Preference number: 6 (lower is better)
Translates to: SRALYACSQSAQ*PWFLLCSSAAL
Trigger: GAGTGCGGCAGAGCTGCAGAGCAGGAACCAGGGCCACTGGGCTGACTGGCTACAGGCGTACAGAGCCCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 72 bp GCTTCCGCAGGTTCCACCTGCACACCTCGGGCTGCTTaGTGTACGCGTAGCGGCCGGTGTTGTCGGAGGCAT +
Preference number: 6 (lower is better)
Translates to: ASAGSTCTPRAA*CTRSGRCCRRH
Trigger: ATGCCTCCGACAACACCGGCCGCTACGCGTACAGCAAGCAGCCCGAGGTGTGCAGGTGGAACCTGCGGAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS CCA 72 bp ACGCAGGCGCCGGCCCGTGTGGTGGGGACTCCCAGGTaGAACATGGCTTCGCTGCATAGAAACTCCCGGATG +
Preference number: 6 (lower is better)
Translates to: TQAPARVVGTPR*NMASLHRNSRM
Trigger: CATCCGGGAGTTTCTATGCAGCGAAGCCATGTTCCACCTGGGAGTCCCCACCACACGGGCCGGCGCCTGCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 72 bp TGCTGTACGCGTAGCGGCCGGTGTTGTCGGAGGCATTaGACACGTGGTCGGGGTCGTACCTGTCCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: CCTRSGRCCRRH*TRGRGRTCPGS
Trigger: GCTTCCTGGACAGGTACGACCCCGACCACGTGTGCAATGCCTCCGACAACACCGGCCGCTACGCGTACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 72 bp CATGGGGGCCTCGGGAGACTCCAGGGGTGTGGAGCGTaGCGAGGCCGTTACGAAGATCATGTCACGCACAGT +
Preference number: 6 (lower is better)
Translates to: HGGLGRLQGCGA*RGRYEDHVTHS
Trigger: ACTGTGCGTGACATGATCTTCGTAACGGCCTCGGCACGCTCCACACCCCTGGAGTCTCCCGAGGCCCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000492092.1
CDS GCA 72 bp CATGGGGGCCTCGGGAGACTCCAGGGGTGTGGAGCGTaGCGAGGCCGTTACGAAGATGTCACGCACAGTTCT +
Preference number: 6 (lower is better)
Translates to: HGGLGRLQGCGA*RGRYEDVTHSS
Trigger: AGAACTGTGCGTGACATCTTCGTAACGGCCTCGGCACGCTCCACACCCCTGGAGTCTCCCGAGGCCCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611222.1
CDS CCA 72 bp CGCCGGCCCGTGTGGTGGGGACTCCCAGGTGGAACATaGCTTCGCTGCATAGAAACTCCCGGATGCTTGACC +
Preference number: 6 (lower is better)
Translates to: RRPVWWGLPGGT*LRCIETPGCLT
Trigger: GGTCAAGCATCCGGGAGTTTCTATGCAGCGAAGCCATGTTCCACCTGGGAGTCCCCACCACACGGGCCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS CCA 72 bp CGAGCAGCTGCACTCGAATGTCGTTCCTCCCCACGCTaGGGCCTGCACGCCCTGTGTGCTCATCTGCAGACT +
Preference number: 6 (lower is better)
Translates to: RAAALECRSSPR*GLHALCAHLQT
Trigger: AGTCTGCAGATGAGCACACAGGGCGTGCAGGCCCCAGCGTGGGGAGGAACGACATTCGAGTGCAGCTGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS CAA 90 bp GTGTTTGTGAAGTCGGCACCGGTCAGATGCATGGTCTCCAGGAGCTaGGACACCAGCGCCCCGTCTTCCTCCAGCTCCACCTGCACGAGG +
Preference number: 6 (lower is better)
Translates to: VFVKSAPVRCMVSRS*DTSAPSSSSSTCTR
Trigger: CCTCGTGCAGGTGGAGCTGGAGGAAGACGGGGCGCTGGTGTCCAAGCTCCTGGAGACCATGCATCTGACCGGTGCCGACTTCACAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 72 bp TGCATAGAAACTCCCGGATGCTTGACCGTAGGACCTTaGGACCGTCGGCCTGTCTGGAGAAGGGCGTGGGCC +
Preference number: 6 (lower is better)
Translates to: CIETPGCLTVGP*DRRPVWRRAWA
Trigger: GGCCCACGCCCTTCTCCAGACAGGCCGACGGTCGCAAGGTCCTACGGTCAAGCATCCGGGAGTTTCTATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 72 bp CGGGTGCCCATAAGCGCGAACAGCTGCGGGTTTGACTaGGCCAGCATCAGCATCATGGATAGCTGCCGGGGA +
Preference number: 6 (lower is better)
Translates to: RVPISANSCGFD*ASISIMDSCRG
Trigger: TCCCCGGCAGCTATCCATGATGCTGATGCTGGCGCAGTCAAACCCGCAGCTGTTCGCGCTTATGGGCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 72 bp GCGATGCCTGCCCGGGTGCCCATAAGCGCGAACAGCTaGGGGTTTGACTGCGCCAGCATCAGCATCATGGAT +
Preference number: 6 (lower is better)
Translates to: AMPARVPISANS*GFDCASISIMD
Trigger: ATCCATGATGCTGATGCTGGCGCAGTCAAACCCGCAGCTGTTCGCGCTTATGGGCACCCGGGCAGGCATCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 72 bp CCGAGGCCGTTACGAAGATGTCACGCACAGTTCTGCTaGCCAGAGCGGGGGCTTACTGCTGTAGGAGCGCTG +
Preference number: 6 (lower is better)
Translates to: PRPLRRCHAQFC*PERGLTAVGAL
Trigger: CAGCGCTCCTACAGCAGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGACATCTTCGTAACGGCCTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611222.1
CDS GCA 72 bp GTGCCGAGGCCGTTACGAAGATGTCACGCACAGTTCTaGTGCCCAGAGCGGGGGCTTACTGCTGTAGGAGCG +
Preference number: 6 (lower is better)
Translates to: VPRPLRRCHAQF*CPERGLTAVGA
Trigger: CGCTCCTACAGCAGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGACATCTTCGTAACGGCCTCGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611222.1
CDS CCA 72 bp GCGCGATGTAGTTCCTCAGCACGTACTTCGGGTTGTTaGCGTGCATCACGCGCACGTGCTCAGCCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: ARCSSSARTSGC*RASRARAQPAR
Trigger: CCTGGCAGGCTGAGCACGTGCGCGTGATGCACGCCAACAACCCGAAGTACGTGCTGAGGAACTACATCGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS CAA 72 bp CTGCATAGAAACTCCCGGATGCTTGACCGTAGGACCTaGCGACCGTCGGCCTGTCTGGAGAAGGGCGTGGGC +
Preference number: 6 (lower is better)
Translates to: LHRNSRMLDRRT*RPSACLEKGVG
Trigger: GCCCACGCCCTTCTCCAGACAGGCCGACGGTCGCAAGGTCCTACGGTCAAGCATCCGGGAGTTTCTATGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS CAA 90 bp CTCCCAGGTGGAACATGGCTTCGCTGCATAGAAACTCCCGGATGCTaGACCGTAGGACCTTGCGACCGTCGGCCTGTCTGGAGAAGGGCG +
Preference number: 6 (lower is better)
Translates to: LPGGTWLRCIETPGC*TVGPCDRRPVWRRA
Trigger: CGCCCTTCTCCAGACAGGCCGACGGTCGCAAGGTCCTACGGTCAAGCATCCGGGAGTTTCTATGCAGCGAAGCCATGTTCCACCTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 72 bp CTTCCTCCAGCTCCACCTGCACGAGGCCCAGCTTCCTaGGCATCTTCTGCAGGTAGTGCCTTTGGAACTCGG +
Preference number: 6 (lower is better)
Translates to: LPPAPPARGPAS*ASSAGSAFGTR
Trigger: CCGAGTTCCAAAGGCACTACCTGCAGAAGATGCGCAGGAAGCTGGGCCTCGTGCAGGTGGAGCTGGAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 72 bp CCGAGGCCGTTACGAAGATCATGTCACGCACAGTTCTaGTGCCCAGAGCGGGGGCTTACTGCTGTAGGAGCG +
Preference number: 6 (lower is better)
Translates to: PRPLRRSCHAQF*CPERGLTAVGA
Trigger: CGCTCCTACAGCAGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGACATGATCTTCGTAACGGCCTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000492092.1
CDS CAA 72 bp TCGATGGTGAGCCCCAGGATGCTCATGTTGTCGGTGTaGAGCACGCCGTGGCAGAAGCCCACACACTGCCAC +
Preference number: 6 (lower is better)
Translates to: SMVSPRMLMLSV*STPWQKPTHCH
Trigger: GTGGCAGTGTGTGGGCTTCTGCCACGGCGTGCTCAACACCGACAACATGAGCATCCTGGGGCTCACCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS GCA 72 bp GGTGGAACATGGCTTCGCTGCATAGAAACTCCCGGATaGTTGACCGTAGGACCTTGCGACCGTCGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: GGTWLRCIETPG*LTVGPCDRRPV
Trigger: GACAGGCCGACGGTCGCAAGGTCCTACGGTCAAGCATCCGGGAGTTTCTATGCAGCGAAGCCATGTTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 72 bp AGGCCGTTACGAAGATCATGTCACGCACAGTTCTGCTaGCCAGAGCGGGGGCTTACTGCTGTAGGAGCGCTG +
Preference number: 6 (lower is better)
Translates to: RPLRRSCHAQFC*PERGLTAVGAL
Trigger: CAGCGCTCCTACAGCAGTAAGCCCCCGCTCTGGGCAGCAGAACTGTGCGTGACATGATCTTCGTAACGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000492092.1
CDS CCA 72 bp CCCGGAAGAAGGCAGCATTTCTCTGCACGCTGTCGCTaGCATGAGCAGCCTGGATCTCGGGGTAAAAGGAGC +
Preference number: 6 (lower is better)
Translates to: PGRRQHFSARCR*HEQPGSRGKRS
Trigger: GCTCCTTTTACCCCGAGATCCAGGCTGCTCATGCCAGCGACAGCGTGCAGAGAAATGCTGCCTTCTTCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1
CDS CAA 72 bp GGAACATGGCTTCGCTGCATAGAAACTCCCGGATGCTaGACCGTAGGACCTTGCGACCGTCGGCCTGTCTGG +
Preference number: 6 (lower is better)
Translates to: GTWLRCIETPGC*TVGPCDRRPVW
Trigger: CCAGACAGGCCGACGGTCGCAAGGTCCTACGGTCAAGCATCCGGGAGTTTCTATGCAGCGAAGCCATGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS GCA 72 bp GTGTGGTGGGGACTCCCAGGTGGAACATGGCTTCGCTaGATAGAAACTCCCGGATGCTTGACCGTAGGACCT +
Preference number: 6 (lower is better)
Translates to: VWWGLPGGTWLR*IETPGCLTVGP
Trigger: AGGTCCTACGGTCAAGCATCCGGGAGTTTCTATGCAGCGAAGCCATGTTCCACCTGGGAGTCCCCACCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS CCA 72 bp AAGCTACACGCAACACAACCGTGCATTGTTCATATTTaGGATTACCATCATAGAACACGTCGCGCACCACCG +
Preference number: 6 (lower is better)
Translates to: KLHATQPCIVHI*DYHHRTRRAPP
Trigger: CGGTGGTGCGCGACGTGTTCTATGATGGTAATCCCAAATATGAACAATGCACGGTTGTGTTGCGTGTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS CAA 90 bp TCCAAACCTTATGAAAGTGGAAGCTACACGCAACACAACCGTGCATaGTTCATATTTGGGATTACCATCATAGAACACGTCGCGCACCAC +
Preference number: 6 (lower is better)
Translates to: SKPYESGSYTQHNRA*FIFGITIIEHVAHH
Trigger: GTGGTGCGCGACGTGTTCTATGATGGTAATCCCAAATATGAACAATGCACGGTTGTGTTGCGTGTAGCTTCCACTTTCATAAGGTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380903.7
ENST00000611222.1
CDS CAA 72 bp TATGAAAGTGGAAGCTACACGCAACACAACCGTGCATaGTTCATATTTGGGATTACCATCATAGAACACGTC +
Preference number: 6 (lower is better)
Translates to: YESGSYTQHNRA*FIFGITIIEHV
Trigger: GACGTGTTCTATGATGGTAATCCCAAATATGAACAATGCACGGTTGTGTTGCGTGTAGCTTCCACTTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380903.7
ENST00000492092.1
ENST00000611222.1