RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SELENOI (Homo sapiens)

Ensembl gene IDs: ENSG00000138018

Ensembl transcript IDs: ENST00000260585.12, ENST00000442141.5, ENST00000447170.1, ENST00000462301.1, ENST00000613142.4

Found 410 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCTCCCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATaGAGACCTAGAAGCCTCCACCCTGGTGGAAGCAGCCATCTTTCT +
Preference number: 1 (lower is better)
Translates to: LLPEPPSGQKRAPSS*RPRSLHPGGSSHLS
Trigger: AGAAAGATGGCTGCTTCCACCAGGGTGGAGGCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CCA 90 bp GGGCCTTTCTCGAGGACTGAGATGAACTGGAAGACAGACAGACTGTaGCTCCAGATCAGGAAGAGGCTTCAGAGTAAGGGCCACATGCAG +
Preference number: 1 (lower is better)
Translates to: GPFSRTEMNWKTDRL*LQIRKRLQSKGHMQ
Trigger: CTGCATGTGGCCCTTACTCTGAAGCCTCTTCCTGATCTGGAGCCACAGTCTGTCTGTCTTCCAGTTCATCTCAGTCCTCGAGAAAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 90 bp TATGTGGCACCTTCCAATTCTGGGATCCTGGCCTTTCTAAGCACATaGAACACAACCCCCTCGCTTAAGCTACCTGTGAGAGAGCTACAA +
Preference number: 1 (lower is better)
Translates to: YVAPSNSGILAFLST*NTTPSLKLPVRELQ
Trigger: TTGTAGCTCTCTCACAGGTAGCTTAAGCGAGGGGGTTGTGTTGCATGTGCTTAGAAAGGCCAGGATCCCAGAATTGGAAGGTGCCACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 90 bp TCTGCATTCCTCCTAAGTCATTACCATAGGACTGGGACTGTCACATaGATTCCTACAATCAGAGCTCACAGGCACCAAATCTCAGGAACC +
Preference number: 1 (lower is better)
Translates to: SAFLLSHYHRTGTVT*IPTIRAHRHQISGT
Trigger: GGTTCCTGAGATTTGGTGCCTGTGAGCTCTGATTGTAGGAATGCATGTGACAGTCCCAGTCCTATGGTAATGACTTAGGAGGAATGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CCA 90 bp GAAAGTGACATATTTAAAGGGCCTTTCTCGAGGACTGAGATGAACTaGAAGACAGACAGACTGTGGCTCCAGATCAGGAAGAGGCTTCAG +
Preference number: 1 (lower is better)
Translates to: ESDIFKGPFSRTEMN*KTDRLWLQIRKRLQ
Trigger: CTGAAGCCTCTTCCTGATCTGGAGCCACAGTCTGTCTGTCTTCCAGTTCATCTCAGTCCTCGAGAAAGGCCCTTTAAATATGTCACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CCA 90 bp CCTGGCTTTCTAAGAATGATTCTCTGGAGAGAAAGACCATGTGAATaGTCTGTGGAAGACCAGAACAATCCTGCTGCAGTCCAAGTGGAT +
Preference number: 1 (lower is better)
Translates to: PGFLRMILWRERPCE*SVEDQNNPAAVQVD
Trigger: ATCCACTTGGACTGCAGCAGGATTGTTCTGGTCTTCCACAGACCATTCACATGGTCTTTCTCTCCAGAGAATCATTCTTAGAAAGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 90 bp TTAGCCTGGCTTTCTAAGAATGATTCTCTGGAGAGAAAGACCATGTaGATGGTCTGTGGAAGACCAGAACAATCCTGCTGCAGTCCAAGT +
Preference number: 1 (lower is better)
Translates to: LAWLSKNDSLERKTM*MVCGRPEQSCCSPS
Trigger: ACTTGGACTGCAGCAGGATTGTTCTGGTCTTCCACAGACCATTCACATGGTCTTTCTCTCCAGAGAATCATTCTTAGAAAGCCAGGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 90 bp CTTCCTCTCCCCAAAATATTCTGCTTGCAGCAAACATATTCCAGTTaGTCAAGCGGTGTTGTTTCTAGGTTCCTGAGAAGGAATGGAATC +
Preference number: 1 (lower is better)
Translates to: LPLPKIFCLQQTYSS*SSGVVSRFLRRNGI
Trigger: GATTCCATTCCTTCTCAGGAACCTAGAAACAACACCGCTTGAGCAACTGGAATATGTTTGCTGCAAGCAGAATATTTTGGGGAGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CCA 90 bp AGGCATCCACACAACCAAAGATTTCTGTATCTGTTTTTGGCTGTTTaGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGT +
Preference number: 1 (lower is better)
Translates to: RHPHNQRFLYLFLAV*GPKVKSSSPSSLLC
Trigger: ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAAAAACAGATACAGAAATCTTTGGTTGTGTGGATGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 90 bp AGCAAACATATTCCAGTTGCTCAAGCGGTGTTGTTTCTAGGTTCCTaGGAAGGAATGGAATCGTCCTCTTGTTTCAGAACACTACAGAAA +
Preference number: 1 (lower is better)
Translates to: SKHIPVAQAVLFLGS*EGMESSSCFRTLQK
Trigger: TTTCTGTAGTGTTCTGAAACAAGAGGACGATTCCATTCCTTCTCAGGAACCTAGAAACAACACCGCTTGAGCAACTGGAATATGTTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 90 bp TGTTATAGTAATTGGCATGACATAAATGCACACAGCTATCTGGAATaGAGTCCTGCTTCAGCTGCTATATCTCTACACAACAAATGGGGG +
Preference number: 1 (lower is better)
Translates to: CYSNWHDINAHSYLE*SPASAAISLHNKWG
Trigger: CCCCCATTTGTTGTGTAGAGATATAGCAGCTGAAGCAGGACTTCATTCCAGATAGCTGTGTGCATTTATGTCATGCCAATTACTATAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 90 bp GATTACAGGCACCTGCCCCAGATTTATAATGCTATTCACAGATCTTaGAGAATTATAACAGGCTCCTTCTACAACTTGGTTAGTGACATC +
Preference number: 1 (lower is better)
Translates to: DYRHLPQIYNAIHRS*RIITGSFYNLVSDI
Trigger: GATGTCACTAACCAAGTTGTAGAAGGAGCCTGTTATAATTCTGCAAGATCTGTGAATAGCATTATAAATCTGGGGCAGGTGCCTGTAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 90 bp AGGAAGAAGCATATCACCACTTTCTCTGGAAAAGTTAGACAATCGTaGTTAACCATATACCCTACAATAACTGCCTGCCAATGTCAGTCA +
Preference number: 1 (lower is better)
Translates to: RKKHITTFSGKVRQS*LTIYPTITACQCQS
Trigger: TGACTGACATTGGCAGGCAGTTATTGTAGGGTATATGGTTAATCACGATTGTCTAACTTTTCCAGAGAAAGTGGTGATATGCTTCTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 90 bp AACAAGAAAAAGAGTCAGCAGTACACTAAAGATCCTCAAGTATCCTaGAACAGTGAATTGCTCAATTTCACTTTCCCCTTGTTGACAGCT +
Preference number: 1 (lower is better)
Translates to: NKKKSQQYTKDPQVS*NSELLNFTFPLLTA
Trigger: AGCTGTCAACAAGGGGAAAGTGAAATTGAGCAATTCACTGTTTCAGGATACTTGAGGATCTTTAGTGTACTGCTGACTCTTTTTCTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 90 bp TATAGAGTACTTAAATCCAGAACTGAGGTCAAGATAAGGCCACTCTaGACACAGGCATCCACACAACCAAAGATTTCTGTATCTGTTTTT +
Preference number: 1 (lower is better)
Translates to: YRVLKSRTEVKIRPL*TQASTQPKISVSVF
Trigger: AAAAACAGATACAGAAATCTTTGGTTGTGTGGATGCCTGTGTTCAGAGTGGCCTTATCTTGACCTCAGTTCTGGATTTAAGTACTCTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 90 bp AGACTAAGACCCATAAACTCTATCAATTACCTATTCGTGGAAGAATaGCACTGTAAACTGTGGCAATGTCAAAATGTGTACTGCACTTTA +
Preference number: 1 (lower is better)
Translates to: RLRPINSINYLFVEE*HCKLWQCQNVYCTL
Trigger: TAAAGTGCAGTACACATTTTGACATTGCCACAGTTTACAGTGTCATTCTTCCACGAATAGGTAATTGATAGAGTTTATGGGTCTTAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 90 bp TCACAACATTGTAAACTCACGAAGTTAGAACCATTAGGAACATTTTaGTGGTCTAACGTACATTCTGCTCAACCAAAATGTCACATAGTT +
Preference number: 1 (lower is better)
Translates to: SQHCKLTKLEPLGTF*WSNVHSAQPKCHIV
Trigger: AACTATGTGACATTTTGGTTGAGCAGAATGTACGTTAGACCAGCAAAATGTTCCTAATGGTTCTAACTTCGTGAGTTTACAATGTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 90 bp AAGGTGACTTATTTTTATCCTTTCCCTATACTAGGTTTGGACTACTaGTACTCCCGCTATTACAAAGTTCCAAATATGAAAACACACTGT +
Preference number: 1 (lower is better)
Translates to: KVTYFYPFPILGLDY*YSRYYKVPNMKTHC
Trigger: ACAGTGTGTTTTCATATTTGGAACTTTGTAATAGCGGGAGTAGCAGTAGTCCAAACCTAGTATAGGGAAAGGATAAAAATAAGTCACCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 90 bp GAAATGATCATATCATTACATGTAGCTAGGTCTTTATCTCCTGAATaGTCCTCTAGGGAGGCAAGTTATCTAAACAACAAAATAACCTAC +
Preference number: 1 (lower is better)
Translates to: EMIISLHVARSLSPE*SSREASYLNNKITY
Trigger: GTAGGTTATTTTGTTGTTTAGATAACTTGCCTCCCTAGAGGAGCATTCAGGAGATAAAGACCTAGCTACATGTAATGATATGATCATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 90 bp TACATACATTGCTACTATGAACACTGCACGTCCCAGACAGACCAATaGCTAATATGTTCAATTAAACTACTTGAATTAAACTACTCTTCC +
Preference number: 1 (lower is better)
Translates to: YIHCYYEHCTSQTDQ*LICSIKLLELNYSS
Trigger: GGAAGAGTAGTTTAATTCAAGTAGTTTAATTGAACATATTAGTCATTGGTCTGTCTGGGACGTGCAGTGTTCATAGTAGCAATGTATGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCCTGCTGCAGTCCAAGTaGATTTTCCTAGAGACAAGC +
Preference number: 2 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSLLQSK*IFLETS
Trigger: GCTTGTCTCTAGGAAAATCCACTTGGACTGCAGCAG...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCCTATTCGTGGAAGAATaGCACTGTAAACTGTGGCAA +
Preference number: 2 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSLFVEE*HCKLWQ
Trigger: TTGCCACAGTTTACAGTGTCATTCTTCCACGAATAG...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCCTAGGTTTGGACTACTaGTACTCCCGCTATTACAAA +
Preference number: 2 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSLGLDY*YSRYYK
Trigger: TTTGTAATAGCGGGAGTAGCAGTAGTCCAAACCTAG...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCGGGGTTTCGCCATGTTaGTCAGGTTGGTGTCGAACT +
Preference number: 2 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPGVSPC*SGWCRT
Trigger: AGTTCGACACCAACCTGAGCAACATGGCGAAACCCC...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCTTGGCAATCATTCATTaGCTTTCCCTTTACCCAGAG +
Preference number: 2 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSLAIIH*LSLYPE
Trigger: CTCTGGGTAAAGGGAAAGGCAATGAATGATTGCCAA...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCTTCTGTATCTGTTTTTaGCTGTTTGGGGACCCAAAG +
Preference number: 2 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSFCICF*LFGDPK
Trigger: CTTTGGGTCCCCAAACAGCCAAAAACAGATACAGAA...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCCATGAGTTAGTGCCGTaGCTCATTTCTAATAACTTG +
Preference number: 2 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSHELVP*LISNNL
Trigger: CAAGTTATTAGAAATGAGTCACGGCACTAACTCATG...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCCTCCCCAAAATATTCTaGTTGCAGCAAACATATTCC +
Preference number: 2 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSLPKIF*LQQTYS
Trigger: GGAATATGTTTGCTGCAAGCAGAATATTTTGGGGAG...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCTTGTTTGGTAATCATTaGCATCTCTTGGTGAAGGTG +
Preference number: 2 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSLFGNH*HLLVKV
Trigger: CACCTTCACCAAGAGATGCCAATGATTACCAAACAA...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCCATGGGATCACTATCTaGATTATTCTGCATCCATTT +
Preference number: 2 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSHGITI*IILHPF
Trigger: AAATGGATGCAGAATAATGCAGATAGTGATCCCATG...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCAGCCTCTGTCCTAGGTaGTGGGTAGATAAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPSLCPR*WVDKRK
Trigger: TTTCCTCTTATCTACCCACCACCTAGGACAGAGGCT...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCAGTGGAAACTATGCCTaGTTTTTCCTTTGTATATTC +
Preference number: 2 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSSGNYA*FFLCIF
Trigger: GAATATACAAAGGAAAAAGCAGGCATAGTTTCCACT...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACAAGGCAAGACCTGAGTaGGCAGCCTCTGTCCTAGGT +
Preference number: 2 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHKARPE*AASVLG
Trigger: ACCTAGGACAGAGGCTGCCCACTCAGGTCTTGCCTT...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCTCTGGAATGAAGTCCTaGTTCAGCTGCTATATCTCT +
Preference number: 2 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPSGMKS*FSCYIS
Trigger: AGAGATATAGCAGCTGAAGCAGGACTTCATTCCAGA...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCCTGTTTTTGGCTGTTTaGGGACCCAAAGTCAAAAGT +
Preference number: 2 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPLFLAV*GPKVKS
Trigger: ACTTTTGACTTTGGGTCCCCAAACAGCCAAAAACAG...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACGCCATCAAGGAGATGTaGATGTGGCAACATCTAGGG +
Preference number: 2 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHAIKEM*MWQHLG
Trigger: CCCTAGATGTTGCCACATTCACATCTCCTTGATGGC...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCGCTATTCACAGATCTTaGAGAATTATAACAGGCTCC +
Preference number: 2 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPAIHRS*RIITGS
Trigger: GGAGCCTGTTATAATTCTGCAAGATCTGTGAATAGC...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CAA 90 bp AGCGGTGTTGTTTCTAGGTTCCTGAGAAGGAATGGAATCGTCCTCTaGTTTCAGAACACTACAGAAAGCCAACTGCAACAGGACCAAGCT +
Preference number: 2 (lower is better)
Translates to: SGVVSRFLRRNGIVL*FQNTTESQLQQDQA
Trigger: AGCTTGGTCCTGTTGCAGTTGGCTTTCTGTAGTGTTCTGAAACAAGAGGACGATTCCATTCCTTCTCAGGAACCTAGAAACAACACCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCATATCAACACAGTGGTaGCTATTTTATCCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPISTQW*LFYPSA
Trigger: TGCACTTGGATAAAATAGGCACCACTGTGTTGATAT...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTAGCCTCTGTCCTAGGTaGTGGGTAGATAAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCSLCPR*WVDKRK
Trigger: TTTCCTCTTATCTACCCACCACCTAGGACAGAGGCT...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAGTCCAAGTACCATACTaGGATCCCACGTCTGTCAAG +
Preference number: 2 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIVQVPY*DPTSVK
Trigger: CTTGACAGACGTGGGATCTCAGTATGGTACTTGGAC...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACCGCTTAAGCTACCTGTaGGAGAGCTACAAATGGCAA +
Preference number: 2 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDRLSYL*ESYKWQ
Trigger: TTGCCATTTGTAGCTCTCTCACAGGTAGCTTAAGCG...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACTGGGGGCTCTCAAGATaGACTTTCAAGAATGGCAGA +
Preference number: 2 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDWGLSR*TFKNGR
Trigger: TCTGCCATTCTTGAAAGTGCATCTTGAGAGCCCCCA...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTGGGGTTTCGCCATGTTaGTCAGGTTGGTGTCGAACT +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPGVSPC*SGWCRT
Trigger: AGTTCGACACCAACCTGAGCAACATGGCGAAACCCC...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACCAGTGGCACAATCTCTaGTCACTGCAATCTCCATCT +
Preference number: 2 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDQWHNL*SLQSPS
Trigger: AGATGGAGATTGCAGTGAGCAGAGATTGTGCCACTG...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCTACATATCAACACAGTaGTGCCTATTTTATCCAAGT +
Preference number: 2 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPYISTQ*CLFYPS
Trigger: ACTTGGATAAAATAGGCACCACTGTGTTGATATGTA...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGACAGCTCACTGTATGCTaGGGAGAAAGGCTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRQLTVC*GERLGH
Trigger: ATGCCCCAGCCTTTCTCCCCAGCATACAGTGAGCTG...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCTCAATTACCTATTCGTaGAAGAATGACACTGTAAAC +
Preference number: 2 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPSITYS*KNDTVN
Trigger: GTTTACAGTGTCATTCTTCCACGAATAGGTAATTGA...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCTTCTTCCCTTTAAAGTaGAAACTATGCCTGCTTTTT +
Preference number: 2 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPFFPLK*KLCLLF
Trigger: AAAAAGCAGGCATAGTTTCCACTTTAAAGGGAAGAA...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTAGCCTCCCCAGTAACTaGGATTACAGGCACATGCCA +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPSLPSN*DYRHMP
Trigger: TGGCATGTGCCTGTAATCCCAGTTACTGGGGAGGCT...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATGTCCAAGTACCATACTaGGATCCCACGTCTGTCAAG +
Preference number: 2 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHVQVPY*DPTSVK
Trigger: CTTGACAGACGTGGGATCTCAGTATGGTACTTGGAC...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTGCCTTTCTAAGCACATaGAACACAACCCCCTCGCTT +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPAFLST*NTTPSL
Trigger: AAGCGAGGGGGTTGTGTTGCATGTGCTTAGAAAGGC...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACAGACCAGAACAATCCTaGTGCAGTCCAAGTGGATTT +
Preference number: 2 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDRPEQS*CSPSGF
Trigger: AAATCCACTTGGACTGCAGCAGGATTGTTCTGGTCT...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACTCTCTACACAACAAATaGGGGCTCTCAAGATGCACT +
Preference number: 2 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDSLHNK*GLSRCT
Trigger: AGTGCATCTTGAGAGCCCCCATTTGTTGTGTAGAGA...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACCATGAGTTAGTGCCGTaGCTCATTTCTAATAACTTG +
Preference number: 2 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHHELVP*LISNNL
Trigger: CAAGTTATTAGAAATGAGTCACGGCACTAACTCATG...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTGCAGAAACACACCTTTaGAGTAAAAGGGCCCCCAAA +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPAETHL*SKRAPK
Trigger: TTTGGGGGCCCTTTTACTTCAAAGGTGTGTTTCTGC...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACCTATTCGTGGAAGAATaGCACTGTAAACTGTGGCAA +
Preference number: 2 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDLFVEE*HCKLWQ
Trigger: TTGCCACAGTTTACAGTGTCATTCTTCCACGAATAG...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTCCAGAACAATCCTGCTaGAGTCCAAGTGGATTTTCC +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPPEQSC*SPSGFS
Trigger: GGAAAATCCACTTGGACTGCAGCAGGATTGTTCTGG...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACAATGAACCATCCCAATaGGTGAGCGATAATTACAAC +
Preference number: 2 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHNEPSQ*VSDNYN
Trigger: GTTGTAATTATCGCTCACCCATTGGGATGGTTCATT...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTAACCATCCCAATGGGTaGGCGATAATTACAACCCAT +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPNHPNG*AIITTH
Trigger: ATGGGTTGTAATTATCGCTCACCCATTGGGATGGTT...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAATGAGTATAGAACCATaGGTTAGTGCCGTGACTCAT +
Preference number: 2 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIMSIEP*VSAVTH
Trigger: ATGAGTCACGGCACTAACTCATGGTTCTATACTCAT...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACTCACTTTCCCCTTGTTaGCAGCTACTTTTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDSLSPC*QLLFFH
Trigger: ATGAAAGAAAAGTAGCTGTCAACAAGGGGAAAGTGA...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTCCATTAGGAACATTTTaGTGGTCTAACGTACATTCT +
Preference number: 2 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCPLGTF*WSNVHS
Trigger: AGAATGTACGTTAGACCAGCAAAATGTTCCTAATGG...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACAAGTCCTGCTTCAGCTaGTATATCTCTACACAACAA +
Preference number: 2 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDKSCFS*YISTQQ
Trigger: TTGTTGTGTAGAGATATAGCAGCTGAAGCAGGACTT...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAGAAAACATGCACGTATaGTCCTTATCATGGCATTGC +
Preference number: 2 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIENMHV*SLSWHC
Trigger: GCAATGCCATGATAAGGAGCATACGTGCATGTTTTC...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTAAAGTACGGAAAACATaGACGTATGCTCCTTATCAT +
Preference number: 2 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCKVRKT*TYAPYH
Trigger: ATGATAAGGAGCATACGTGCATGTTTTCCGTACTTT...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACCCTACAATAACTGCCTaGCAATGTCAGTCATTTGTA +
Preference number: 2 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDPTITA*QCQSFV
Trigger: TACAAATGACTGACATTGGCAGGCAGTTATTGTAGG...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACATACCCTACAATAACTaGCTGCCAATGTCAGTCATT +
Preference number: 2 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDIPYNN*LPMSVI
Trigger: AATGACTGACATTGGCAGGCAGTTATTGTAGGGTAT...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTGGGATTACAGGCACCTaGCCCAGATTTATAATGCTA +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPGITGT*PRFIML
Trigger: TAGCATTATAAATCTGGGGCAGGTGCCTGTAATCCC...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACCAAACATATTCCAGTTaGTCAAGCGGTGTTGTTTCT +
Preference number: 2 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDQTYSS*SSGVVS
Trigger: AGAAACAACACCGCTTGAGCAACTGGAATATGTTTG...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACTTAGGAACATTTTGCTaGTCTAACGTACATTCTGCT +
Preference number: 2 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHLGTFC*SNVHSA
Trigger: AGCAGAATGTACGTTAGACCAGCAAAATGTTCCTAA...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTCATGTGAATGGTCTGTaGAAGACCAGAACAATCCTG +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPHVNGL*KTRTIL
Trigger: CAGGATTGTTCTGGTCTTCCACAGACCATTCACATG...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTGCCATATTTAAACAATaGACCATCCCAATGGGTGAG +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPAIFKQ*TIPMGE
Trigger: CTCACCCATTGGGATGGTTCATTGTTTAAATATGGC...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTACACAGCACCTCACCCTaGAAAAAGAAGAGAGGGGAA +
Preference number: 2 (lower is better)
Translates to: FYYTVQGQESLWSKFVILHSTSP*KKKRGE
Trigger: TTCCCCTCTCTTCTTTTTTCAGGGTGAGGTGCTGTG...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTATGAGTATAGAACCATaGGTTAGTGCCGTGACTCAT +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPMSIEP*VSAVTH
Trigger: ATGAGTCACGGCACTAACTCATGGTTCTATACTCAT...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAACTGGGACTGTCACATaGATTCCTACAATCAGAGCT +
Preference number: 2 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRTGTVT*IPTIRA
Trigger: AGCTCTGATTGTAGGAATGCATGTGACAGTCCCAGT...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTCAAGGTACTTTTATCTaGATTCCTCCTAAGTCATTA +
Preference number: 2 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCQGTFI*IPPKSL
Trigger: TAATGACTTAGGAGGAATGCAGATAAAAGTACCTTG...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTTTGGCAATCATTCATTaGCTTTCCCTTTACCCAGAG +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPLAIIH*LSLYPE
Trigger: CTCTGGGTAAAGGGAAAGGCAATGAATGATTGCCAA...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAAGGTGTATGCAACTTTaGTCAGCAGAAACACAATAC +
Preference number: 2 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIRCMQL*SAETQY
Trigger: GTATTGTGTTTCTGCTGACCAAAGTTGCATACACCT...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTTTCTGTATCTGTTTTTaGCTGTTTGGGGACCCAAAG +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPFCICF*LFGDPK
Trigger: CTTTGGGTCCCCAAACAGCCAAAAACAGATACAGAA...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CAA 90 bp AGCCATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTaGTTTGGTAATCATTGGCATCTCTTGGTGAAGGTGACTTATTTT +
Preference number: 2 (lower is better)
Translates to: SHFQGKEKPVFGNCL*FGNHWHLLVKVTYF
Trigger: AAAATAAGTCACCTTCACCAAGAGATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAGCCATATTTAAACAATaGACCATCCCAATGGGTGAG +
Preference number: 2 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRAIFKQ*TIPMGE
Trigger: CTCACCCATTGGGATGGTTCATTGTTTAAATATGGC...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTAAGTCCTGCTTCAGCTaGTATATCTCTACACAACAA +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPKSCFS*YISTQQ
Trigger: TTGTTGTGTAGAGATATAGCAGCTGAAGCAGGACTT...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAGAAAACATGCACGTATaGTCCTTATCATGGCATTGC +
Preference number: 2 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRENMHV*SLSWHC
Trigger: GCAATGCCATGATAAGGAGCATACGTGCATGTTTTC...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTGTCTCTAACTTCAGTTaGAGTATATGTGCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPVSNFS*SICAAE
Trigger: TTCAGCAGCACATATACTGCAACTGAAGTTAGAGAC...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACTCAATTACCTATTCGTaGAAGAATGACACTGTAAAC +
Preference number: 2 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDSITYS*KNDTVN
Trigger: GTTTACAGTGTCATTCTTCCACGAATAGGTAATTGA...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACTTCTTCCCTTTAAAGTaGAAACTATGCCTGCTTTTT +
Preference number: 2 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDFFPLK*KLCLLF
Trigger: AAAAAGCAGGCATAGTTTCCACTTTAAAGGGAAGAA...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR TCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGATCACTTTCCCCTTGTTaGCAGCTACTTTTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRSLSPC*QLLFFH
Trigger: ATGAAAGAAAAGTAGCTGTCAACAAGGGGAAAGTGA...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATTATATGTATCATTCCTaGTGTCCAAGTACCATACTG +
Preference number: 2 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHYMYHS*CPSTIL
Trigger: CAGTATGGTACTTGGACAGCAGGAATGATACATATA...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTATATCAACACAGTGGTaGCTATTTTATCCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPISTQW*LFYPSA
Trigger: TGCACTTGGATAAAATAGGCACCACTGTGTTGATAT...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTAGTCAAAGTCTGTTATaGAAGCAAGGTACATTCCAA +
Preference number: 2 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPSQSLL*KQGTFQ
Trigger: TTGGAATGTACCTTGCTTCCATAACAGACTTTGACT...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CAA 90 bp CTCTTGGTGAAGGTGACTTATTTTTATCCTTTCCCTATACTAGGTTaGGACTACTGCTACTCCCGCTATTACAAAGTTCCAAATATGAAA +
Preference number: 2 (lower is better)
Translates to: LLVKVTYFYPFPILG*DYCYSRYYKVPNMK
Trigger: TTTCATATTTGGAACTTTGTAATAGCGGGAGTAGCAGTAGTCCAAACCTAGTATAGGGAAAGGATAAAAATAAGTCACCTTCACCAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCTATATGTATCATTCCTaGTGTCCAAGTACCATACTG +
Preference number: 2 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIYMYHS*CPSTIL
Trigger: CAGTATGGTACTTGGACAGCAGGAATGATACATATA...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR GCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCCCATTAGGAACATTTTaGTGGTCTAACGTACATTCT +
Preference number: 2 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIPLGTF*WSNVHS
Trigger: AGAATGTACGTTAGACCAGCAAAATGTTCCTAATGG...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTATTGTTTGGTAATCATTaGCATCTCTTGGTGAAGGTG +
Preference number: 2 (lower is better)
Translates to: FYYTVQGQESLWSKFVILLFGNH*HLLVKV
Trigger: CACCTTCACCAAGAGATGCCAATGATTACCAAACAA...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGATACATATCAACACAGTaGTGCCTATTTTATCCAAGT +
Preference number: 2 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRYISTQ*CLFYPS
Trigger: ACTTGGATAAAATAGGCACCACTGTGTTGATATGTA...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CCA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTATTAGGAACATTTTGCTaGTCTAACGTACATTCTGCT +
Preference number: 2 (lower is better)
Translates to: FYYTVQGQESLWSKFVILLGTFC*SNVHSA
Trigger: AGCAGAATGTACGTTAGACCAGCAAAATGTTCCTAA...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 72 bp GAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATaGAGACCTAGAAGCCTCCACCCTGGTGGAAGCAGC +
Preference number: 3 (lower is better)
Translates to: EPPSGQKRAPSS*RPRSLHPGGSS
Trigger: GCTGCTTCCACCAGGGTGGAGGCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CAA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCGGCTCCTTCTACAACTaGGTTAGTGACATCAAGTAC +
Preference number: 3 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSGSFYN*VSDIKY
Trigger: GTACTTGATGTCACTAACCAAGTTGTAGAAGGAGCC...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CAA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCTTCCCTATACTAGGTTaGGACTACTGCTACTCCCGC +
Preference number: 3 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPFPILG*DYCYSR
Trigger: GCGGGAGTAGCAGTAGTCCAAACCTAGTATAGGGAA...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 72 bp CCTTCCAATTCTGGGATCCTGGCCTTTCTAAGCACATaGAACACAACCCCCTCGCTTAAGCTACCTGTGAGA +
Preference number: 3 (lower is better)
Translates to: PSNSGILAFLST*NTTPSLKLPVR
Trigger: TCTCACAGGTAGCTTAAGCGAGGGGGTTGTGTTGCATGTGCTTAGAAAGGCCAGGATCCCAGAATTGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CAA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACCCCATCAAGCTTACTTaGTTCCCCCTGGCACGTTCC +
Preference number: 3 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHPIKLT*FPLARS
Trigger: GGAACGTGCCAGGGGGAACAAAGTAAGCTTGATGGG...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 72 bp AGCTTACTTTGTTCCCCCTGGCACGTTCCCAGTCCTTaGCTAGTCAAGAGATCTAAGGCCATCAAGGAGATG +
Preference number: 3 (lower is better)
Translates to: SLLCSPWHVPSP*LVKRSKAIKEM
Trigger: CATCTCCTTGATGGCCTTAGATCTCTTGACTAGTCAAGGACTGGGAACGTGCCAGGGGGAACAAAGTAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 72 bp CTCCTAAGTCATTACCATAGGACTGGGACTGTCACATaGATTCCTACAATCAGAGCTCACAGGCACCAAATC +
Preference number: 3 (lower is better)
Translates to: LLSHYHRTGTVT*IPTIRAHRHQI
Trigger: GATTTGGTGCCTGTGAGCTCTGATTGTAGGAATGCATGTGACAGTCCCAGTCCTATGGTAATGACTTAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CCA 72 bp ATATTTAAAGGGCCTTTCTCGAGGACTGAGATGAACTaGAAGACAGACAGACTGTGGCTCCAGATCAGGAAG +
Preference number: 3 (lower is better)
Translates to: IFKGPFSRTEMN*KTDRLWLQIRK
Trigger: CTTCCTGATCTGGAGCCACAGTCTGTCTGTCTTCCAGTTCATCTCAGTCCTCGAGAAAGGCCCTTTAAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 72 bp ATTCCAGTTGCTCAAGCGGTGTTGTTTCTAGGTTCCTaGGAAGGAATGGAATCGTCCTCTTGTTTCAGAACA +
Preference number: 3 (lower is better)
Translates to: IPVAQAVLFLGS*EGMESSSCFRT
Trigger: TGTTCTGAAACAAGAGGACGATTCCATTCCTTCTCAGGAACCTAGAAACAACACCGCTTGAGCAACTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 72 bp CCCAAAATATTCTGCTTGCAGCAAACATATTCCAGTTaGTCAAGCGGTGTTGTTTCTAGGTTCCTGAGAAGG +
Preference number: 3 (lower is better)
Translates to: PKIFCLQQTYSS*SSGVVSRFLRR
Trigger: CCTTCTCAGGAACCTAGAAACAACACCGCTTGAGCAACTGGAATATGTTTGCTGCAAGCAGAATATTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CAA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGATTCCCTATACTAGGTTaGGACTACTGCTACTCCCGC +
Preference number: 3 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRFPILG*DYCYSR
Trigger: GCGGGAGTAGCAGTAGTCCAAACCTAGTATAGGGAA...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CAA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTTTCACTTTCCCCTTGTaGACAGCTACTTTTCTTTCA +
Preference number: 3 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCFTFPL*TATFLS
Trigger: TGAAAGAAAAGTAGCTGTCAACAAGGGGAAAGTGAA...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 72 bp GTTATTCACCCACAGGGTGTTCAAGCAAGAGCATGCTaGCTTACAAAGACACCTCATGGGACAAAGAAAATT +
Preference number: 3 (lower is better)
Translates to: VIHPQGVQARAC*LTKTPHGTKKI
Trigger: AATTTTCTTTGTCCCATGAGGTGTCTTTGTAAGTCAGCATGCTCTTGCTTGAACACCCTGTGGGTGAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 72 bp GAGAAAGGCTGGGGCATGAAGTCACCCACAATATCATaGATAAGCCTGAAAGACCTTTCATACTTTGGAAAT +
Preference number: 3 (lower is better)
Translates to: EKGWGMKSPTIS*ISLKDLSYFGN
Trigger: ATTTCCAAAGTATGAAAGGTCTTTCAGGCTTATGCATGATATTGTGGGTGACTTCATGCCCCAGCCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 72 bp AATTGGCATGACATAAATGCACACAGCTATCTGGAATaGAGTCCTGCTTCAGCTGCTATATCTCTACACAAC +
Preference number: 3 (lower is better)
Translates to: NWHDINAHSYLE*SPASAAISLHN
Trigger: GTTGTGTAGAGATATAGCAGCTGAAGCAGGACTTCATTCCAGATAGCTGTGTGCATTTATGTCATGCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CAA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAAAGAGAAACCAGTATTaGGCAACTGTCTGTTGTTTG +
Preference number: 3 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIKRNQY*ATVCCL
Trigger: CAAACAACAGACAGTTGCCAAATACTGGTTTCTCTT...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 72 bp AAGAGTCAGCAGTACACTAAAGATCCTCAAGTATCCTaGAACAGTGAATTGCTCAATTTCACTTTCCCCTTG +
Preference number: 3 (lower is better)
Translates to: KSQQYTKDPQVS*NSELLNFTFPL
Trigger: CAAGGGGAAAGTGAAATTGAGCAATTCACTGTTTCAGGATACTTGAGGATCTTTAGTGTACTGCTGACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 72 bp CAAAATTTCCCAAGTTCAGATTATATGTATCATTCCTaGTGTCCAAGTACCATACTGAGATCCCACGTCTGT +
Preference number: 3 (lower is better)
Translates to: QNFPSSDYMYHS*CPSTILRSHVC
Trigger: ACAGACGTGGGATCTCAGTATGGTACTTGGACAGCAGGAATGATACATATAATCTGAACTTGGGAAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 72 bp CACCTGCCCCAGATTTATAATGCTATTCACAGATCTTaGAGAATTATAACAGGCTCCTTCTACAACTTGGTT +
Preference number: 3 (lower is better)
Translates to: HLPQIYNAIHRS*RIITGSFYNLV
Trigger: AACCAAGTTGTAGAAGGAGCCTGTTATAATTCTGCAAGATCTGTGAATAGCATTATAAATCTGGGGCAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CAA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTAATTTCACTTTCCCCTaGTTGACAGCTACTTTTCTT +
Preference number: 3 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPNFTFP*LTATFL
Trigger: AAGAAAAGTAGCTGTCAACAAGGGGAAAGTGAAATT...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 72 bp CATATCACCACTTTCTCTGGAAAAGTTAGACAATCGTaGTTAACCATATACCCTACAATAACTGCCTGCCAA +
Preference number: 3 (lower is better)
Translates to: HITTFSGKVRQS*LTIYPTITACQ
Trigger: TTGGCAGGCAGTTATTGTAGGGTATATGGTTAATCACGATTGTCTAACTTTTCCAGAGAAAGTGGTGATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 72 bp TCGTCCTCTTGTTTCAGAACACTACAGAAAGCCAACTaGAACAGGACCAAGCTAAACAATTCATATTTGATT +
Preference number: 3 (lower is better)
Translates to: SSSCFRTLQKAN*NRTKLNNSYLI
Trigger: AATCAAATATGAATTGTTTAGCTTGGTCCTGTTGCAGTTGGCTTTCTGTAGTGTTCTGAAACAAGAGGACGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 72 bp CCCATAAACTCTATCAATTACCTATTCGTGGAAGAATaGCACTGTAAACTGTGGCAATGTCAAAATGTGTAC +
Preference number: 3 (lower is better)
Translates to: PINSINYLFVEE*HCKLWQCQNVY
Trigger: GTACACATTTTGACATTGCCACAGTTTACAGTGTCATTCTTCCACGAATAGGTAATTGATAGAGTTTATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 72 bp ATATCATTACATGTAGCTAGGTCTTTATCTCCTGAATaGTCCTCTAGGGAGGCAAGTTATCTAAACAACAAA +
Preference number: 3 (lower is better)
Translates to: ISLHVARSLSPE*SSREASYLNNK
Trigger: TTTGTTGTTTAGATAACTTGCCTCCCTAGAGGAGCATTCAGGAGATAAAGACCTAGCTACATGTAATGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CCA 72 bp GGGAAAATGCCATATTTAAACAATGAACCATCCCAATaGGTGAGCGATAATTACAACCCATTCTCAAATTCT +
Preference number: 3 (lower is better)
Translates to: GKMPYLNNEPSQ*VSDNYNPFSNS
Trigger: AGAATTTGAGAATGGGTTGTAATTATCGCTCACCCATTGGGATGGTTCATTGTTTAAATATGGCATTTTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR-3UTR CAA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTAAAGAGAAACCAGTATTaGGCAACTGTCTGTTGTTTG +
Preference number: 3 (lower is better)
Translates to: FYYTVQGQESLWSKFVILKRNQY*ATVCCL
Trigger: CAAACAACAGACAGTTGCCAAATACTGGTTTCTCTT...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 72 bp GAAACAGTGAATTGCTCAATTTCACTTTCCCCTTGTTaGCAGCTACTTTTCTTTCATCTAACAATGTCAATA +
Preference number: 3 (lower is better)
Translates to: ETVNCSISLSPC*QLLFFHLTMSI
Trigger: TATTGACATTGTTAGATGAAAGAAAAGTAGCTGTCAACAAGGGGAAAGTGAAATTGAGCAATTCACTGTTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR TCA 72 bp ACAAAGACACCTCATGGGACAAAGAAAATTCTGGTCTaGCTTCACAAATTTTCTATAGAGTACTTAAATCCA +
Preference number: 3 (lower is better)
Translates to: TKTPHGTKKILV*LHKFSIEYLNP
Trigger: TGGATTTAAGTACTCTATAGAAAATTTGTGAAGTCAGACCAGAATTTTCTTTGTCCCATGAGGTGTCTTTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR GCA 72 bp TATTTTTATCCTTTCCCTATACTAGGTTTGGACTACTaGTACTCCCGCTATTACAAAGTTCCAAATATGAAA +
Preference number: 3 (lower is better)
Translates to: YFYPFPILGLDY*YSRYYKVPNMK
Trigger: TTTCATATTTGGAACTTTGTAATAGCGGGAGTAGCAGTAGTCCAAACCTAGTATAGGGAAAGGATAAAAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCCCCAGAGCCACCCTCTaGCCAGAAACGGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSPRATL*PETGPI
Trigger: GATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGGG...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCAAGGATGGCAAAGACTaGGCTGCCCGAGAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSKDGKD*AAREGR
Trigger: CCTACCTTCTCGGGCAGCCCAGTCTTTGCCATCCTT...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613142.4
CDS-3UTR CCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCAAGCACCACACCGGCTaGGCAAGGATGGCAAAGACT +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSKHHTG*ARMAKT
Trigger: AGTCTTTGCCATCCTTGCCCAGCCGGTGTGGTGCTT...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613142.4
CDS-3UTR TCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCCCGGCTACAAGGCTGTaGCACACAAGCACCACACCG +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPPATRL*HTSTTP
Trigger: CGGTGTGGTGCTTGTGTGTCACAGCCTTGTAGCCGG...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCTGTAGGCTACGAAGTTaGGGATGCCCACTACAATCC +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSCRLRS*GCPLQS
Trigger: GGATTGTAGTGGGCATCCTCAACTTCGTAGCCTACA...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCTTGGTTCTGCGAGCTTaGTTTCCGTCCACACCATCT +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSLVLRA*FPSTPS
Trigger: AGATGGTGTGGACGGAAAGCAAGCTCGCAGAACCAA...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCGCAGAAACACACCTTTaGAGTAAAAGGGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSAETHL*SKRAPK
Trigger: TTTGGGGGCCCTTTTACTTCAAAGGTGTGTTTCTGC...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCAAATGGCTGCTCAGCTaGTTTACCACTCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSKWLLS*FTTRTP
Trigger: TGGAGTACGAGTGGTAAAGCAGCTGAGCAGCCATTT...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCACAATCTCTGCTCACTaGAATCTCCATCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSTISAH*NLHLPG
Trigger: ACCTGGGAGATGGAGATTGCAGTGAGCAGAGATTGT...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCCGGGCCCCATCATCATaGAGACCTAGAAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPRAPSS*RPRSLH
Trigger: GTGGAGGCTTCTAGGTCTGCATGATGATGGGGCCCG...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCAGGACTGAGATGAACTaGAAGACAGACAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSRTEMN*KTDRLW
Trigger: CCACAGTCTGTCTGTCTTCCAGTTCATCTCAGTCCT...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCACTGGGACTGTCACATaGATTCCTACAATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSTGTVT*IPTIRA
Trigger: AGCTCTGATTGTAGGAATGCATGTGACAGTCCCAGT...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTCCGGCTGGGCAAGGATaGCAAAGACTGGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCPAGQG*QRLGCP
Trigger: CGGGCAGCCCAGTCTTTGCCATCCTTGCCCAGCCGG...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613142.4
CDS-3UTR TCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCCTTAGTCACAGGGCATaGAACCTTACTCAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSLSHRA*NLTQKD
Trigger: ATCTTTCTGAGTAAGGTTTCATGCCCTGTGACTAAG...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCGAAAACATGCACGTATaGTCCTTATCATGGCATTGC +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSENMHV*SLSWHC
Trigger: GCAATGCCATGATAAGGAGCATACGTGCATGTTTTC...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACAGCCCGCAGCACAACTaGTCCCAGAGCCACCCTCTG +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHSPQHN*SQSHPL
Trigger: CAGAGGGTGGCTCTGGGAGCAGTTGTGCTGCGGGCT...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCCTGTTTTTGGCTGTTTaGGGACCCAAAGTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSLFLAV*GPKVKS
Trigger: ACTTTTGACTTTGGGTCCCCAAACAGCCAAAAACAG...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCGCCATCAAGGAGATGTaGATGTGGCAACATCTAGGG +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPAIKEM*MWQHLG
Trigger: CCCTAGATGTTGCCACATTCACATCTCCTTGATGGC...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCCAAACATATTCCAGTTaGTCAAGCGGTGTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSQTYSS*SSGVVS
Trigger: AGAAACAACACCGCTTGAGCAACTGGAATATGTTTG...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCAAAGTTTTCTTCAAGTaGGGAAATGGACAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSKVFFK*GNGQAG
Trigger: TCCAGCTTGTCCATTTCCCCACTTGAAGAAAACTTT...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACTCAAAGCCAGCCAGCTaGTCCGGGCTCACGTATTCG +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHSKPAS*SGLTYS
Trigger: CGAATACGTGAGCCCGGAGCAGCTGGCTGGCTTTGA...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCATATCAACACAGTGGTaGCTATTTTATCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSISTQW*LFYPSA
Trigger: TGCACTTGGATAAAATAGGCACCACTGTGTTGATAT...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCGCAAAAACAATGAAATaGATCGGCATACTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSAKTMK*IGILSL
Trigger: CAAAGAGAGTATGCCGATGCATTTCATTGTTTTTGC...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCTTAGGAACATTTTGCTaGTCTAACGTACATTCTGCT +
Preference number: 4 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSLGTFC*SNVHSA
Trigger: AGCAGAATGTACGTTAGACCAGCAAAATGTTCCTAA...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCGGGATTACAGGCACCTaGCCCAGATTTATAATGCTA +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPGITGT*PRFIML
Trigger: TAGCATTATAAATCTGGGGCAGGTGCCTGTAATCCC...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCTCTTTATCTCCTGAATaGTCCTCTAGGGAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPSLSPE*SSREAS
Trigger: ACTTGCCTCCCTAGAGGAGCATTCAGGAGATAAAGA...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTAGCCCGCAGCACAACTaGTCCCAGAGCCACCCTCTG +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPSPQHN*SQSHPL
Trigger: CAGAGGGTGGCTCTGGGAGCAGTTGTGCTGCGGGCT...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACCAGCTCACTGTATGCTaGGGAGAAAGGCTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHQLTVC*GERLGH
Trigger: ATGCCCCAGCCTTTCTCCCCAGCATACAGTGAGCTG...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCCATGTGAATGGTCTGTaGAAGACCAGAACAATCCTG +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPHVNGL*KTRTIL
Trigger: CAGGATTGTTCTGGTCTTCCACAGACCATTCACATG...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CAA 72 bp ACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTaGTTCCCCCTGGCACGTTCCCAGTCCTTGACTAGT +
Preference number: 4 (lower is better)
Translates to: TQSQKFQPIKLT*FPLARSQSLTS
Trigger: ACTAGTCAAGGACTGGGAACGTGCCAGGGGGAACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATACAACAAGGCAAGACCTaGGTGGGCAGCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIQQGKT*VGSLCP
Trigger: AGGACAGAGGCTGCCCACTCAGGTCTTGCCTTGTTG...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCCAACCAATTCAAAGTTaGACACCGGGTACTACTCAT +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPQPIQS*TPGTTH
Trigger: ATGAGTAGTACCCGGTGTCCAACTTTGAATTGGTTG...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACAAGGCAAGACCTGAGTaGGCAGCCTCTGTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDKARPE*AASVLG
Trigger: ACCTAGGACAGAGGCTGCCCACTCAGGTCTTGCCTT...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACCCATGTTGCTCAGGTTaGTGTCGAACTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDPCCSG*CRTPGL
Trigger: GAGCCCAGGAGTTCGACACCAACCTGAGCAACATGG...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACAGCCTCCCCAGTAACTaGGATTACAGGCACATGCCA +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHSLPSN*DYRHMP
Trigger: TGGCATGTGCCTGTAATCCCAGTTACTGGGGAGGCT...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTCACAGCACCTCACCCTaGAAAAAGAAGAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCHSTSP*KKKRGE
Trigger: TTCCCCTCTCTTCTTTTTTCAGGGTGAGGTGCTGTG...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATCAACAAGGCAAGACCTaGGTGGGCAGCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHQQGKT*VGSLCP
Trigger: AGGACAGAGGCTGCCCACTCAGGTCTTGCCTTGTTG...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTTCAAAGCCAGCCAGCTaGTCCGGGCTCACGTATTCG +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPSKPAS*SGLTYS
Trigger: CGAATACGTGAGCCCGGAGCAGCTGGCTGGCTTTGA...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCAAGTCCTGCTTCAGCTaGTATATCTCTACACAACAA +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPKSCFS*YISTQQ
Trigger: TTGTTGTGTAGAGATATAGCAGCTGAAGCAGGACTT...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCCCTACAATAACTGCCTaGCAATGTCAGTCATTTGTA +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPPTITA*QCQSFV
Trigger: TACAAATGACTGACATTGGCAGGCAGTTATTGTAGG...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCGGTCAAGAAAGCCTGTaGTCCAAGTTTGTCATTTTA +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPGQESL*SKFVIL
Trigger: TAAAATGACAAACTTGGACCACAGGCTTTCTTGACC...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATACAGCTCACTGTATGCTaGGGAGAAAGGCTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIQLTVC*GERLGH
Trigger: ATGCCCCAGCCTTTCTCCCCAGCATACAGTGAGCTG...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCGCTCCTTCTACAACTTaGTTAGTGACATCAAGTACT +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPAPSTT*LVTSST
Trigger: AGTACTTGATGTCACTAACCAAGTTGTAGAAGGAGC...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCCATAGCTTCATAGACTaGATTGAGTTTCAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPHSFID*IEFQGV
Trigger: AACACCTTGAAACTCAATTCAGTCTATGAAGCTATG...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACCACAGCACCTCACCCTaGAAAAAGAAGAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDHSTSP*KKKRGE
Trigger: TTCCCCTCTCTTCTTTTTTCAGGGTGAGGTGCTGTG...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACGAGAGAAAGACCATGTaGATGGTCTGTGGAAGACCA +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHERKTM*MVCGRP
Trigger: TGGTCTTCCACAGACCATTCACATGGTCTTTCTCTC...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACTGGGGGCTCTCAAGATaGACTTTCAAGAATGGCAGA +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHWGLSR*TFKNGR
Trigger: TCTGCCATTCTTGAAAGTGCATCTTGAGAGCCCCCA...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCAAAGTACGGAAAACATaGACGTATGCTCCTTATCAT +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPKVRKT*TYAPYH
Trigger: ATGATAAGGAGCATACGTGCATGTTTTCCGTACTTT...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACGCCTTTCTAAGCACATaGAACACAACCCCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDAFLST*NTTPSL
Trigger: AAGCGAGGGGGTTGTGTTGCATGTGCTTAGAAAGGC...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTCCAGAACAATCCTGCTaGAGTCCAAGTGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCPEQSC*SPSGFS
Trigger: GGAAAATCCACTTGGACTGCAGCAGGATTGTTCTGG...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAACCGGCTACAAGGCTGTaGCACACAAGCACCACACCG +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKPATRL*HTSTTP
Trigger: CGGTGTGGTGCTTGTGTGTCACAGCCTTGTAGCCGG...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACCAACTATCCAGGCCATaGTCAAAAAGCTCCCCTAAG +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDQLSRP*SKSSPK
Trigger: CTTAGGGGAGCTTTTTGATCATGGCCTGGATAGTTG...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACAACCATCCCAATGGGTaGGCGATAATTACAACCCAT +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHNHPNG*AIITTH
Trigger: ATGGGTTGTAATTATCGCTCACCCATTGGGATGGTT...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACGCAGAAACACACCTTTaGAGTAAAAGGGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDAETHL*SKRAPK
Trigger: TTTGGGGGCCCTTTTACTTCAAAGGTGTGTTTCTGC...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATACACAGCTATCTGGAATaGAGTCCTGCTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIHSYLE*SPASAA
Trigger: AGCAGCTGAAGCAGGACTTCATTCCAGATAGCTGTG...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACCATACATTGCTACTATaGACACTGCACGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDHTLLL*TLHVPD
Trigger: GTCTGGGACGTGCAGTGTTCATAGTAGCAATGTATG...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTACTGGGACTGTCACATaGATTCCTACAATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCTGTVT*IPTIRA
Trigger: AGCTCTGATTGTAGGAATGCATGTGACAGTCCCAGT...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCAGTGGAAACTATGCCTaGTTTTTCCTTTGTATATTC +
Preference number: 4 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPSGNYA*FFLCIF
Trigger: GAATATACAAAGGAAAAAGCAGGCATAGTTTCCACT...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTATTCCCACAGCTCCATaGAAGGAAGAAGCATATCAC +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCIPTAP*KEEAYH
Trigger: GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAAT...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACTGCTACTATGAACACTaGACGTCCCAGACAGACCAA +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDCYYEH*TSQTDQ
Trigger: TTGGTCTGTCTGGGACGTGCAGTGTTCATAGTAGCA...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACTCTCTACACAACAAATaGGGGCTCTCAAGATGCACT +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHSLHNK*GLSRCT
Trigger: AGTGCATCTTGAGAGCCCCCATTTGTTGTGTAGAGA...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAAAGGCAAGACCTGAGTaGGCAGCCTCTGTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRKARPE*AASVLG
Trigger: ACCTAGGACAGAGGCTGCCCACTCAGGTCTTGCCTT...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACGAAAGACCATGTGAATaGTCTGTGGAAGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHERPCE*SVEDQN
Trigger: GTTCTGGTCTTCCACAGACCATTCACATGGTCTTTC...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTCCTACTGCATTACTTTaGGGTTTCACAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCPTALL*GFTAAE
Trigger: TTCTGCTGCTGTGAAACCCCAAAGTAATGCAGTAGG...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATCTTGTGACCTGGTGCTaGGGCATAAAAGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHLVTWC*GIKVRI
Trigger: GATCCTGACTTTTATGCCTCAGCACCAGGTCACAAG...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATACCCAGTGGGACAGGATaGAAGAAAACAAAACTACCC +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIPSGTG*KKTKLP
Trigger: GGGTAGTTTTGTTTTCTTTCATCCTGTCCCACTGGG...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTGCCATCAAGGAGATGTaGATGTGGCAACATCTAGGG +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPAIKEM*MWQHLG
Trigger: CCCTAGATGTTGCCACATTCACATCTCCTTGATGGC...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAGCTTCCAGAATCCAGTaGCAAGAAACAGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIASRIQ*QETVWS
Trigger: AGACCAGACTGTTTCTTGTCACTGGATTCTGGAAGC...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTTCTGGAATGAAGTCCTaGTTCAGCTGCTATATCTCT +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCSGMKS*FSCYIS
Trigger: AGAGATATAGCAGCTGAAGCAGGACTTCATTCCAGA...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTGAAAACATGCACGTATaGTCCTTATCATGGCATTGC +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCENMHV*SLSWHC
Trigger: GCAATGCCATGATAAGGAGCATACGTGCATGTTTTC...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAGGGGTTTCGCCATGTTaGTCAGGTTGGTGTCGAACT +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRGVSPC*SGWCRT
Trigger: AGTTCGACACCAACCTGAGCAACATGGCGAAACCCC...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAACGGGCCCCATCATCATaGAGACCTAGAAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKRAPSS*RPRSLH
Trigger: GTGGAGGCTTCTAGGTCTGCATGATGATGGGGCCCG...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTAATGTCATATCCCCATaGCAGGAAAAGAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCNVISP*QEKNPC
Trigger: ACAGGGATTCTTTTCCTGCCATGGGGATATGACATT...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTTTCTGTATCTGTTTTTaGCTGTTTGGGGACCCAAAG +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCFCICF*LFGDPK
Trigger: CTTTGGGTCCCCAAACAGCCAAAAACAGATACAGAA...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATGGCACCTTCCAATTCTaGGATCCTGGCCTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHGTFQF*DPGLSK
Trigger: CTTAGAAAGGCCAGGATCCCAGAATTGGAAGGTGCC...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACCATGTGAATGGTCTGTaGAAGACCAGAACAATCCTG +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDHVNGL*KTRTIL
Trigger: CAGGATTGTTCTGGTCTTCCACAGACCATTCACATG...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACGAAAGACCATGTGAATaGTCTGTGGAAGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDERPCE*SVEDQN
Trigger: GTTCTGGTCTTCCACAGACCATTCACATGGTCTTTC...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCAGCCTCCCCAGTAACTaGGATTACAGGCACATGCCA +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVISLPSN*DYRHMP
Trigger: TGGCATGTGCCTGTAATCCCAGTTACTGGGGAGGCT...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACGGCTCACACAACCCATaGTTAAAGGAAAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHGSHNP*LKENGK
Trigger: TTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCC...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CAA 72 bp GTTTCTAGGTTCCTGAGAAGGAATGGAATCGTCCTCTaGTTTCAGAACACTACAGAAAGCCAACTGCAACAG +
Preference number: 4 (lower is better)
Translates to: VSRFLRRNGIVL*FQNTTESQLQQ
Trigger: CTGTTGCAGTTGGCTTTCTGTAGTGTTCTGAAACAAGAGGACGATTCCATTCCTTCTCAGGAACCTAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGATGTAGGCTACGAAGTTaGGGATGCCCACTACAATCC +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRCRLRS*GCPLQS
Trigger: GGATTGTAGTGGGCATCCTCAACTTCGTAGCCTACA...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAGTCCAAGTACCATACTaGGATCCCACGTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRVQVPY*DPTSVK
Trigger: CTTGACAGACGTGGGATCTCAGTATGGTACTTGGAC...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACATGAGTATAGAACCATaGGTTAGTGCCGTGACTCAT +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDMSIEP*VSAVTH
Trigger: ATGAGTCACGGCACTAACTCATGGTTCTATACTCAT...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTTCACTTTCCCCTTGTTaGCAGCTACTTTTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCSLSPC*QLLFFH
Trigger: ATGAAAGAAAAGTAGCTGTCAACAAGGGGAAAGTGA...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATACAAGCAAGAGCATGCTaGCTTACAAAGACACCTCAT +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIQARAC*LTKTPH
Trigger: ATGAGGTGTCTTTGTAAGTCAGCATGCTCTTGCTTG...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATCAGTATATGTGCTGCTaGAGAGCAGTCTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHQYMCC*RAVCFQ
Trigger: TTGGAAGCAGACTGCTCTTCAGCAGCACATATACTG...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATCATACATTGCTACTATaGACACTGCACGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHHTLLL*TLHVPD
Trigger: GTCTGGGACGTGCAGTGTTCATAGTAGCAATGTATG...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAGCCTTTCTCGAGGACTaGGATGAACTGGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRAFLED*DELEDR
Trigger: TCTGTCTTCCAGTTCATCTCAGTCCTCGAGAAAGGC...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCTTGGTTCTGCGAGCTTaGTTTCCGTCCACACCATCT +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVILVLRA*FPSTPS
Trigger: AGATGGTGTGGACGGAAAGCAAGCTCGCAGAACCAA...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACATGTATACAGGAGAATaGTCTCAACGTAAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHMYTGE*SQRKRL
Trigger: TAGCCTCTTACGTTGAGAGCATTCTCCTGTATACAT...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTTCCTTATCATGGCATTaGTCCCCAAAAGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPSLSWH*SPKGSS
Trigger: TGAGCTGCCTTTTGGGGAGCAATGCCATGATAAGGA...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATTCCTTATCATGGCATTaGTCCCCAAAAGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHSLSWH*SPKGSS
Trigger: TGAGCTGCCTTTTGGGGAGCAATGCCATGATAAGGA...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAATTCCCACAGCTCCATaGAAGGAAGAAGCATATCAC +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIIPTAP*KEEAYH
Trigger: GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAAT...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAGCCTTTCTAAGCACATaGAACACAACCCCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRAFLST*NTTPSL
Trigger: AAGCGAGGGGGTTGTGTTGCATGTGCTTAGAAAGGC...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATCCAGAACAATCCTGCTaGAGTCCAAGTGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHPEQSC*SPSGFS
Trigger: GGAAAATCCACTTGGACTGCAGCAGGATTGTTCTGG...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTCAGTGGCACAATCTCTaGTCACTGCAATCTCCATCT +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPQWHNL*SLQSPS
Trigger: AGATGGAGATTGCAGTGAGCAGAGATTGTGCCACTG...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTCAAACATATTCCAGTTaGTCAAGCGGTGTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCQTYSS*SSGVVS
Trigger: AGAAACAACACCGCTTGAGCAACTGGAATATGTTTG...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACACAGAGAAAGTGGATTaGTATCCACAGCACTGTACT +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDTEKVD*YPQHCT
Trigger: AGTACAGTGCTGTGGATACCAATCCACTTTCTCTGT...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATAGCCTCTGTCCTAGGTaGTGGGTAGATAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHSLCPR*WVDKRK
Trigger: TTTCCTCTTATCTACCCACCACCTAGGACAGAGGCT...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATCTGCTGCAGTCCAAGTaGATTTTCCTAGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHLLQSK*IFLETS
Trigger: GCTTGTCTCTAGGAAAATCCACTTGGACTGCAGCAG...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CAA 72 bp AACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTaGGTCAGCAGAAACACAATACGAGCCTCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: NLKRHFLQVYAT*VSRNTIRASGL
Trigger: TAGGCCAGAGGCTCGTATTGTGTTTCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATAACACTGACACCAGTTaGTCCTCTTCCAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHNTDTS*SSSKDG
Trigger: TCCATCTTTGGAAGAGGATCAACTGGTGTCAGTGTT...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACAAAGAACAAAAACACTaGCACCAGTTGATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDKEQKH*HQLILF
Trigger: GAAGAGGATCAACTGGTGTCAGTGTTTTTGTTCTTT...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCCCCAGTGGGACAGGATaGAAGAAAACAAAACTACCC +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIPSGTG*KKTKLP
Trigger: GGGTAGTTTTGTTTTCTTTCATCCTGTCCCACTGGG...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAAGAAAGGCTGGGGCATaGAGTCACCCACAATATCAT +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRRKAGA*SHPQYH
Trigger: ATGATATTGTGGGTGACTTCATGCCCCAGCCTTTCT...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATCAAGCAAGAGCATGCTaGCTTACAAAGACACCTCAT +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHQARAC*LTKTPH
Trigger: ATGAGGTGTCTTTGTAAGTCAGCATGCTCTTGCTTG...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGACGCTTAAGCTACCTGTaGGAGAGCTACAAATGGCAA +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRRLSYL*ESYKWQ
Trigger: TTGCCATTTGTAGCTCTCTCACAGGTAGCTTAAGCG...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCCGCTTAAGCTACCTGTaGGAGAGCTACAAATGGCAA +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIRLSYL*ESYKWQ
Trigger: TTGCCATTTGTAGCTCTCTCACAGGTAGCTTAAGCG...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCCAGTATATGTGCTGCTaGAGAGCAGTCTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIQYMCC*RAVCFQ
Trigger: TTGGAAGCAGACTGCTCTTCAGCAGCACATATACTG...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACCAGATGAACTCCACATaGAGAAACTATCTGATAAAG +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHQMNST*RNYLIK
Trigger: CTTTATCAGATAGTTTCTTCATGTGGAGTTCATCTG...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAAAATGGCTGCTCAGCTaGTTTACCACTCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRKWLLS*FTTRTP
Trigger: TGGAGTACGAGTGGTAAAGCAGCTGAGCAGCCATTT...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAAAATCTGAAAATGGCTaGTCAGCTGCTTTACCACTC +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIKSENG*SAALPL
Trigger: GAGTGGTAAAGCAGCTGAGCAGCCATTTTCAGATTT...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTATATCAACACAGTGGTaGCTATTTTATCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCISTQW*LFYPSA
Trigger: TGCACTTGGATAAAATAGGCACCACTGTGTTGATAT...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACCATGGGATCACTATCTaGATTATTCTGCATCCATTT +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHHGITI*IILHPF
Trigger: AAATGGATGCAGAATAATGCAGATAGTGATCCCATG...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACTCACCCACAATATCATaGATAAGCCTGAAAGACCTT +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDSPTIS*ISLKDL
Trigger: AAGGTCTTTCAGGCTTATGCATGATATTGTGGGTGA...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACAAAGTACGGAAAACATaGACGTATGCTCCTTATCAT +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHKVRKT*TYAPYH
Trigger: ATGATAAGGAGCATACGTGCATGTTTTCCGTACTTT...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACCTTCTTACAGGTGTATaGAACTTTGGTCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDLLTGV*NFGQQK
Trigger: TTTCTGCTGACCAAAGTTGCATACACCTGTAAGAAG...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTCTCCCCTCCTCTCAATaGCTCTATATTAGAATAAAT +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCLPSSQ*LYIRIN
Trigger: ATTTATTCTAATATAGAGGCATTGAGAGGAGGGGAG...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACCTCCCCTCCTCTCAATaGCTCTATATTAGAATAAAT +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHLPSSQ*LYIRIN
Trigger: ATTTATTCTAATATAGAGGCATTGAGAGGAGGGGAG...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATAGACCAGAACAATCCTaGTGCAGTCCAAGTGGATTT +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHRPEQS*CSPSGF
Trigger: AAATCCACTTGGACTGCAGCAGGATTGTTCTGGTCT...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACGCTATTCACAGATCTTaGAGAATTATAACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDAIHRS*RIITGS
Trigger: GGAGCCTGTTATAATTCTGCAAGATCTGTGAATAGC...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTCTACAGAAAGCCAACTaGAACAGGACCAAGCTAAAC +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPLQKAN*NRTKLN
Trigger: GTTTAGCTTGGTCCTGTTGCAGTTGGCTTTCTGTAG...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTTTATACTTTTCCCAGTaGGACAGGATGAAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCLYFSQ*DRMKEN
Trigger: GTTTTCTTTCATCCTGTCCCACTGGGAAAAGTATAA...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACAAAGAAATAGTCACCTaGCTAATGTCATATCCCCAT +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHKEIVT*LMSYPH
Trigger: ATGGGGATATGACATTAGCCAGGTGACTATTTCTTT...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCAGCCTCTGTCCTAGGTaGTGGGTAGATAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVISLCPR*WVDKRK
Trigger: TTTCCTCTTATCTACCCACCACCTAGGACAGAGGCT...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGACTGCTGCAGTCCAAGTaGATTTTCCTAGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRLLQSK*IFLETS
Trigger: GCTTGTCTCTAGGAAAATCCACTTGGACTGCAGCAG...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CAA 72 bp CTGCAACAGGACCAAGCTAAACAATTCATATTTGATTaGGCCATGATTCCTCCACCTATTCTTAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: LQQDQAKQFIFD*AMIPPPILSHR
Trigger: CCTGTGACTAAGAATAGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTTCCAGAATGGATGCATaGCATACAGAGAAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPSRMDA*HTEKVD
Trigger: ATCCACTTTCTCTGTATGTCATGCATCCATTCTGGA...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTAACAAAGTAAACACATaGCCAACTATCCAGGCCATG +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPNKVNT*PTIQAM
Trigger: CATGGCCTGGATAGTTGGTCATGTGTTTACTTTGTT...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAAACACTGACACCAGTTaGTCCTCTTCCAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRNTDTS*SSSKDG
Trigger: TCCATCTTTGGAAGAGGATCAACTGGTGTCAGTGTT...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATGCCATATTTAAACAATaGACCATCCCAATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHAIFKQ*TIPMGE
Trigger: CTCACCCATTGGGATGGTTCATTGTTTAAATATGGC...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAACACAGCTATCTGGAATaGAGTCCTGCTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKHSYLE*SPASAA
Trigger: AGCAGCTGAAGCAGGACTTCATTCCAGATAGCTGTG...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAAGCCTTTCTCGAGGACTaGGATGAACTGGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKAFLED*DELEDR
Trigger: TCTGTCTTCCAGTTCATCTCAGTCCTCGAGAAAGGC...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTCTAGGTTTGGACTACTaGTACTCCCGCTATTACAAA +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPLGLDY*YSRYYK
Trigger: TTTGTAATAGCGGGAGTAGCAGTAGTCCAAACCTAG...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACCAAGGTACTTTTATCTaGATTCCTCCTAAGTCATTA +
Preference number: 4 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHQGTFI*IPPKSL
Trigger: TAATGACTTAGGAGGAATGCAGATAAAAGTACCTTG...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAATACCCTACAATAACTaGCTGCCAATGTCAGTCATT +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIIPYNN*LPMSVI
Trigger: AATGACTGACATTGGCAGGCAGTTATTGTAGGGTAT...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAGTCTCTAACTTCAGTTaGAGTATATGTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIVSNFS*SICAAE
Trigger: TTCAGCAGCACATATACTGCAACTGAAGTTAGAGAC...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATACAGAGAAAGTGGATTaGTATCCACAGCACTGTACT +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHTEKVD*YPQHCT
Trigger: AGTACAGTGCTGTGGATACCAATCCACTTTCTCTGT...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACAAAGAAATAGTCACCTaGCTAATGTCATATCCCCAT +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDKEIVT*LMSYPH
Trigger: ATGGGGATATGACATTAGCCAGGTGACTATTTCTTT...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAAATGAACCATCCCAATaGGTGAGCGATAATTACAAC +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASINEPSQ*VSDNYN
Trigger: GTTGTAATTATCGCTCACCCATTGGGATGGTTCATT...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGATCTCTACACAACAAATaGGGGCTCTCAAGATGCACT +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRSLHNK*GLSRCT
Trigger: AGTGCATCTTGAGAGCCCCCATTTGTTGTGTAGAGA...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTTCAATTACCTATTCGTaGAAGAATGACACTGTAAAC +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCSITYS*KNDTVN
Trigger: GTTTACAGTGTCATTCTTCCACGAATAGGTAATTGA...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTTTCTTCCCTTTAAAGTaGAAACTATGCCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCFFPLK*KLCLLF
Trigger: AAAAAGCAGGCATAGTTTCCACTTTAAAGGGAAGAA...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAACTGTATTATGTTAGATaGAGGGGACTGGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKLYYVR*RGLGEG
Trigger: GCCTTCCCCCAGTCCCCTCCATCTAACATAATACAG...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTACTGTATTATGTTAGATaGAGGGGACTGGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: FYYTVQGQESLWSKFVILLYYVR*RGLGEG
Trigger: GCCTTCCCCCAGTCCCCTCCATCTAACATAATACAG...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTGGCTCACACAACCCATaGTTAAAGGAAAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPGSHNP*LKENGK
Trigger: TTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCC...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGATCTCAAAGCTCTTTCTaGCTCACACAACCCATGGTT +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRSQSSF*LTQPMV
Trigger: AACCATGGGTTGTGTGAGCCAGAAAGAGCTTTGAGA...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGACCTACTGCATTACTTTaGGGTTTCACAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRPTALL*GFTAAE
Trigger: TTCTGCTGCTGTGAAACCCCAAAGTAATGCAGTAGG...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCTCCAGAATGGATGCATaGCATACAGAGAAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVISRMDA*HTEKVD
Trigger: ATCCACTTTCTCTGTATGTCATGCATCCATTCTGGA...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATACATAGCTTCATAGACTaGATTGAGTTTCAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIHSFID*IEFQGV
Trigger: AACACCTTGAAACTCAATTCAGTCTATGAAGCTATG...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTGTTTGGTTTCCTCAATaGGAAGGGGTAAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPVWFPQ*EGVNLK
Trigger: TTTCAGATTTACCCCTTCTCATTGAGGAAACCAAAC...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAAAGAAAGGCTGGGGCATaGAGTCACCCACAATATCAT +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKRKAGA*SHPQYH
Trigger: ATGATATTGTGGGTGACTTCATGCCCCAGCCTTTCT...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCCTATTCGTGGAAGAATaGCACTGTAAACTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVILFVEE*HCKLWQ
Trigger: TTGCCACAGTTTACAGTGTCATTCTTCCACGAATAG...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAAGCTTCCAGAATCCAGTaGCAAGAAACAGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKASRIQ*QETVWS
Trigger: AGACCAGACTGTTTCTTGTCACTGGATTCTGGAAGC...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGACTCAACTCCCACAACTaGAGTCACTATGTAGACAAA +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRLNSHN*SHYVDK
Trigger: TTTGTCTACATAGTGACTGCAGTTGTGGGAGTTGAG...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTATGTATACAGGAGAATaGTCTCAACGTAAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPMYTGE*SQRKRL
Trigger: TAGCCTCTTACGTTGAGAGCATTCTCCTGTATACAT...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATATATATGTATCATTCCTaGTGTCCAAGTACCATACTG +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIYMYHS*CPSTIL
Trigger: CAGTATGGTACTTGGACAGCAGGAATGATACATATA...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATACATGGGATCACTATCTaGATTATTCTGCATCCATTT +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIHGITI*IILHPF
Trigger: AAATGGATGCAGAATAATGCAGATAGTGATCCCATG...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAATGGGGGCTCTCAAGATaGACTTTCAAGAATGGCAGA +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKWGLSR*TFKNGR
Trigger: TCTGCCATTCTTGAAAGTGCATCTTGAGAGCCCCCA...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATTCACCCACAATATCATaGATAAGCCTGAAAGACCTT +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHSPTIS*ISLKDL
Trigger: AAGGTCTTTCAGGCTTATGCATGATATTGTGGGTGA...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTCTTCTTACAGGTGTATaGAACTTTGGTCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPLLTGV*NFGQQK
Trigger: TTTCTGCTGACCAAAGTTGCATACACCTGTAAGAAG...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAAACAATCTCTGCTCACTaGAATCTCCATCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKTISAH*NLHLPG
Trigger: ACCTGGGAGATGGAGATTGCAGTGAGCAGAGATTGT...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGATTGGCAATCATTCATTaGCTTTCCCTTTACCCAGAG +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRLAIIH*LSLYPE
Trigger: CTCTGGGTAAAGGGAAAGGCAATGAATGATTGCCAA...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTATGCTACTATGAACACTaGACGTCCCAGACAGACCAA +
Preference number: 4 (lower is better)
Translates to: FYYTVQGQESLWSKFVILCYYEH*TSQTDQ
Trigger: TTGGTCTGTCTGGGACGTGCAGTGTTCATAGTAGCA...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAGCAAAAACAATGAAATaGATCGGCATACTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIAKTMK*IGILSL
Trigger: CAAAGAGAGTATGCCGATGCATTTCATTGTTTTTGC...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGACAACCAATTCAAAGTTaGACACCGGGTACTACTCAT +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRQPIQS*TPGTTH
Trigger: ATGAGTAGTACCCGGTGTCCAACTTTGAATTGGTTG...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATATTAGGAACATTTTGCTaGTCTAACGTACATTCTGCT +
Preference number: 4 (lower is better)
Translates to: FRIGVTLDIHSPPLNASILGTFC*SNVHSA
Trigger: AGCAGAATGTACGTTAGACCAGCAAAATGTTCCTAA...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATAATGAACCATCCCAATaGGTGAGCGATAATTACAAC +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHNEPSQ*VSDNYN
Trigger: GTTGTAATTATCGCTCACCCATTGGGATGGTTCATT...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACTACATATCAACACAGTaGTGCCTATTTTATCCAAGT +
Preference number: 4 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDYISTQ*CLFYPS
Trigger: ACTTGGATAAAATAGGCACCACTGTGTTGATATGTA...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTAGGTGTATGCAACTTTaGTCAGCAGAAACACAATAC +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPRCMQL*SAETQY
Trigger: GTATTGTGTTTCTGCTGACCAAAGTTGCATACACCT...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCTTCTGTATCTGTTTTTaGCTGTTTGGGGACCCAAAG +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIFCICF*LFGDPK
Trigger: CTTTGGGTCCCCAAACAGCCAAAAACAGATACAGAA...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATGCTCCTTCTACAACTTaGTTAGTGACATCAAGTACT +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHAPSTT*LVTSST
Trigger: AGTACTTGATGTCACTAACCAAGTTGTAGAAGGAGC...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAAAGGACTGAGATGAACTaGAAGACAGACAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKRTEMN*KTDRLW
Trigger: CCACAGTCTGTCTGTCTTCCAGTTCATCTCAGTCCT...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCAAAGAACAAAAACACTaGCACCAGTTGATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIKEQKH*HQLILF
Trigger: GAAGAGGATCAACTGGTGTCAGTGTTTTTGTTCTTT...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCCATGAGTTAGTGCCGTaGCTCATTTCTAATAACTTG +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIHELVP*LISNNL
Trigger: CAAGTTATTAGAAATGAGTCACGGCACTAACTCATG...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTCCATTAGGAACATTTTaGTGGTCTAACGTACATTCT +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPPLGTF*WSNVHS
Trigger: AGAATGTACGTTAGACCAGCAAAATGTTCCTAATGG...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCAAGTCCTGCTTCAGCTaGTATATCTCTACACAACAA +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIKSCFS*YISTQQ
Trigger: TTGTTGTGTAGAGATATAGCAGCTGAAGCAGGACTT...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCCCTACAATAACTGCCTaGCAATGTCAGTCATTTGTA +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIPTITA*QCQSFV
Trigger: TACAAATGACTGACATTGGCAGGCAGTTATTGTAGG...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATACCCTACAATAACTaGCTGCCAATGTCAGTCATT +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIIPYNN*LPMSVI
Trigger: AATGACTGACATTGGCAGGCAGTTATTGTAGGGTAT...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAAAGACCAGAACAATCCTaGTGCAGTCCAAGTGGATTT +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKRPEQS*CSPSGF
Trigger: AAATCCACTTGGACTGCAGCAGGATTGTTCTGGTCT...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAACTACAGAAAGCCAACTaGAACAGGACCAAGCTAAAC +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKLQKAN*NRTKLN
Trigger: GTTTAGCTTGGTCCTGTTGCAGTTGGCTTTCTGTAG...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTTATAGTGTTCCAGAATaGATGCATGACATACAGAGA +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPYSVPE*MHDIQR
Trigger: TCTCTGTATGTCATGCATCCATTCTGGAACACTATA...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATAGTCAAAGTCTGTTATaGAAGCAAGGTACATTCCAA +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHSQSLL*KQGTFQ
Trigger: TTGGAATGTACCTTGCTTCCATAACAGACTTTGACT...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAATCTCAAAGCTCTTTCTaGCTCACACAACCCATGGTT +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKSQSSF*LTQPMV
Trigger: AACCATGGGTTGTGTGAGCCAGAAAGAGCTTTGAGA...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
3UTR CAA 72 bp AAGGTGACTTATTTTTATCCTTTCCCTATACTAGGTTaGGACTACTGCTACTCCCGCTATTACAAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: KVTYFYPFPILG*DYCYSRYYKVP
Trigger: TGGAACTTTGTAATAGCGGGAGTAGCAGTAGTCCAAACCTAGTATAGGGAAAGGATAAAAATAAGTCACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTAAAATCTGAAAATGGCTaGTCAGCTGCTTTACCACTC +
Preference number: 4 (lower is better)
Translates to: FYYTVQGQESLWSKFVILKSENG*SAALPL
Trigger: GAGTGGTAAAGCAGCTGAGCAGCCATTTTCAGATTT...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGATATATGTATCATTCCTaGTGTCCAAGTACCATACTG +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRYMYHS*CPSTIL
Trigger: CAGTATGGTACTTGGACAGCAGGAATGATACATATA...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAATTGGCAATCATTCATTaGCTTTCCCTTTACCCAGAG +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKLAIIH*LSLYPE
Trigger: CTCTGGGTAAAGGGAAAGGCAATGAATGATTGCCAA...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATCCAAAATATTCTGCTTaGAGCAAACATATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHPKYSA*SKHIPV
Trigger: AACTGGAATATGTTTGCTGCAAGCAGAATATTTTGG...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAAAATGGTACATACATTaGTACTATGAACACTGCACG +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRKWYIH*YYEHCT
Trigger: CGTGCAGTGTTCATAGTAGCAATGTATGTACCATTT...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTTCAATTAAAACCTACTaGATTACTTTGGGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPSIKTY*ITLGFH
Trigger: GTGAAACCCCAAAGTAATGCAGTAGGTTTTAATTGA...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGATATAGTGTTCCAGAATaGATGCATGACATACAGAGA +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRYSVPE*MHDIQR
Trigger: TCTCTGTATGTCATGCATCCATTCTGGAACACTATA...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAAAATGTCATATCCCCATaGCAGGAAAAGAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKNVISP*QEKNPC
Trigger: ACAGGGATTCTTTTCCTGCCATGGGGATATGACATT...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAAGTCAAAGTCTGTTATaGAAGCAAGGTACATTCCAA +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRSQSLL*KQGTFQ
Trigger: TTGGAATGTACCTTGCTTCCATAACAGACTTTGACT...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAAGGGAGTTTACATGTTaGCAATCATTCATTGCCTTT +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRREFTC*QSFIAF
Trigger: AAAGGCAATGAATGATTGCCAACATGTAAACTCCCT...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTAGTTTGGTTTCCTCAATaGGAAGGGGTAAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: FYYTVQGQESLWSKFVILVWFPQ*EGVNLK
Trigger: TTTCAGATTTACCCCTTCTCATTGAGGAAACCAAAC...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGACAAGGTACTTTTATCTaGATTCCTCCTAAGTCATTA +
Preference number: 4 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRQGTFI*IPPKSL
Trigger: TAATGACTTAGGAGGAATGCAGATAAAAGTACCTTG...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAAGCTATTCACAGATCTTaGAGAATTATAACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKAIHRS*RIITGS
Trigger: GGAGCCTGTTATAATTCTGCAAGATCTGTGAATAGC...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTACTCCCCAAAATATTCTaGTTGCAGCAAACATATTCC +
Preference number: 4 (lower is better)
Translates to: FYYTVQGQESLWSKFVILLPKIF*LQQTYS
Trigger: GGAATATGTTTGCTGCAAGCAGAATATTTTGGGGAG...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATCCTCTTCCAAAGATaGAATAAACAGTCACAACAA +
Preference number: 4 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIILFQR*NKQSQQ
Trigger: TTGTTGTGACTGTTTATTCCATCTTTGGAAGAGGAT...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAATTGTTTGGTAATCATTaGCATCTCTTGGTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKLFGNH*HLLVKV
Trigger: CACCTTCACCAAGAGATGCCAATGATTACCAAACAA...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAAAAAGTTTTCTTCAAGTaGGGAAATGGACAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKKVFFK*GNGQAG
Trigger: TCCAGCTTGTCCATTTCCCCACTTGAAGAAAACTTT...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAAGGTCAAGAAAGCCTGTaGTCCAAGTTTGTCATTTTA +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKGQESL*SKFVIL
Trigger: TAAAATGACAAACTTGGACCACAGGCTTTCTTGACC...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTAAGGTGTATGCAACTTTaGTCAGCAGAAACACAATAC +
Preference number: 4 (lower is better)
Translates to: FYYTVQGQESLWSKFVILRCMQL*SAETQY
Trigger: GTATTGTGTTTCTGCTGACCAAAGTTGCATACACCT...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR TCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAACAGATGAACTCCACATaGAGAAACTATCTGATAAAG +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKQMNST*RNYLIK
Trigger: CTTTATCAGATAGTTTCTTCATGTGGAGTTCATCTG...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTAAAATGGTACATACATTaGTACTATGAACACTGCACG +
Preference number: 4 (lower is better)
Translates to: FYYTVQGQESLWSKFVILKWYIH*YYEHCT
Trigger: CGTGCAGTGTTCATAGTAGCAATGTATGTACCATTT...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTAAGGGAGTTTACATGTTaGCAATCATTCATTGCCTTT +
Preference number: 4 (lower is better)
Translates to: FYYTVQGQESLWSKFVILREFTC*QSFIAF
Trigger: AAAGGCAATGAATGATTGCCAACATGTAAACTCCCT...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR GCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAATCAATTAAAACCTACTaGATTACTTTGGGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKSIKTY*ITLGFH
Trigger: GTGAAACCCCAAAGTAATGCAGTAGGTTTTAATTGA...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CCA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAATTCTTCCCTTTAAAGTaGAAACTATGCCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKFFPLK*KLCLLF
Trigger: AAAAAGCAGGCATAGTTTCCACTTTAAAGGGAAGAA...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS CCA 90 bp TGTGACACACAAGCACCACACCGGCTGGGCAAGGATGGCAAAGACTaGGCTGCCCGAGAAGGTAGGAGAGCCGCGCTCCGCCCACCGCGC +
Preference number: 5 (lower is better)
Translates to: CDTQAPHRLGKDGKD*AAREGRRAALRPPR
Trigger: GCGCGGTGGGCGGAGCGCGGCTCTCCTACCTTCTCGGGCAGCCCAGTCTTTGCCATCCTTGCCCAGCCGGTGTGGTGCTTGTGTGTCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613142.4
CDS CCA 90 bp CTTAGGAAGTCCCTGCCGGGAGCAGAAGTGGAGACATCAGCAGGATaGCATCGGCAAGTCGCTCCCCTCCCGGGCCTCATCTGCCAAACG +
Preference number: 5 (lower is better)
Translates to: LRKSLPGAEVETSAG*HRQVAPLPGLICQT
Trigger: CGTTTGGCAGATGAGGCCCGGGAGGGGAGCGACTTGCCGATGCCATCCTGCTGATGTCTCCACTTCTGCTCCCGGCAGGGACTTCCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462301.1
CDS GCA 90 bp TCATCTGGTGGCCCTAGCGCCACAAGCTGCCGCTTAGGAAGTCCCTaGCGGGAGCAGAAGTGGAGACATCAGCAGGATGGCATCGGCAAG +
Preference number: 5 (lower is better)
Translates to: SSGGPSATSCRLGSP*REQKWRHQQDGIGK
Trigger: CTTGCCGATGCCATCCTGCTGATGTCTCCACTTCTGCTCCCGGCAGGGACTTCCTAAGCGGCAGCTTGTGGCGCTAGGGCCACCAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462301.1
CDS GCA 90 bp TTCCTGTGCACCTCCCTTTCATCTGGTGGCCCTAGCGCCACAAGCTaGCGCTTAGGAAGTCCCTGCCGGGAGCAGAAGTGGAGACATCAG +
Preference number: 5 (lower is better)
Translates to: FLCTSLSSGGPSATS*RLGSPCREQKWRHQ
Trigger: CTGATGTCTCCACTTCTGCTCCCGGCAGGGACTTCCTAAGCGGCAGCTTGTGGCGCTAGGGCCACCAGATGAAAGGGAGGTGCACAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462301.1
CDS GCA 90 bp TCAGCAGGATGGCATCGGCAAGTCGCTCCCCTCCCGGGCCTCATCTaGCAAACGATCATCTCCTCCTCCGAAGTTGTATGCATGACAGGC +
Preference number: 5 (lower is better)
Translates to: SAGWHRQVAPLPGLI*QTIISSSEVVCMTG
Trigger: GCCTGTCATGCATACAACTTCGGAGGAGGAGATGATCGTTTGGCAGATGAGGCCCGGGAGGGGAGCGACTTGCCGATGCCATCCTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462301.1
CDS-3UTR CAA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCGCAAACATATTCCAGTaGCTCAAGCGGTGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSANIFQ*LKRCCF
Trigger: GAAACAACACCGCTTGAGCAACTGGAATATGTTTGC...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCGCCATTAGCAGAAAATaGAATACGACCAGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSAISRK*NTTSRK
Trigger: CTTTCTGCTGGTCGTATTCAATTTTCTGCTAATGGC...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCATTGGTTCTGCGAGCTaGCTTTCCGTCCACACCATC +
Preference number: 5 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPIGSAS*LSVHTI
Trigger: GATGGTGTGGACGGAAAGCAAGCTCGCAGAACCAAT...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp CCAGAGCCACCCTCTGGCCAGAAACGGGCCCCATCATCATGCAGACCTAGAAGCCAGGTGTATGCAACTTaGGTCAGCAGAAACACAATA +
Preference number: 5 (lower is better)
Translates to: PEPPSGQKRAPSSCRPRSQVYAT*VSRNTI
Trigger: TATTGTGTTTCTGCTGACCAAAGTTGCATACACCTG...GCTTCTAGGTCTGCATGATGATGGGGCCCGTTTCTGGCCAGAGGGTGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCTCCACAGCACTGTACTaGTACTTATCAAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPSTALY*YLSKPA
Trigger: GGCTGGCTTTGATAAGTACAAGTACAGTGCTGTGGA...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCAAGGGAGTGCTAGAATaGGTTCTGCGAGCTTGCTTT +
Preference number: 5 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPKGVLE*VLRACF
Trigger: AAAGCAAGCTCGCAGAACCAATTCTAGCACTCCCTT...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCACCTACTGCATTACTTaGGGGTTTCACAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPTYCIT*GFHSSR
Trigger: TCTGCTGCTGTGAAACCCCAAAGTAATGCAGTAGGT...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCGGCTCCTTCTACAACTaGGTTAGTGACATCAAGTAC +
Preference number: 5 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPGSFYN*VSDIKY
Trigger: GTACTTGATGTCACTAACCAAGTTGTAGAAGGAGCC...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS TCA 90 bp CTCCGAAGTTGTATGCATGACAGGCGAGTGGAAACTTCACTAAAATaGAGGCGATTGACACAACAGAAGGAACTCCATCCTTTCGGGGGC +
Preference number: 5 (lower is better)
Translates to: LRSCMHDRRVETSLK*RRLTQQKELHPFGG
Trigger: GCCCCCGAAAGGATGGAGTTCCTTCTGTTGTGTCAATCGCCTTCATTTTAGTGAAGTTTCCACTCGCCTGTCATGCATACAACTTCGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462301.1
CDS-3UTR CAA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACCCCATCAAGCTTACTTaGTTCCCCCTGGCACGTTCC +
Preference number: 5 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDPIKLT*FPLARS
Trigger: GGAACGTGCCAGGGGGAACAAAGTAAGCTTGATGGG...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS TCA 90 bp GCCTCATCTGCCAAACGATCATCTCCTCCTCCGAAGTTGTATGCATaGCAGGCGAGTGGAAACTTCACTAAAATGAAGGCGATTGACACA +
Preference number: 5 (lower is better)
Translates to: ASSAKRSSPPPKLYA*QASGNFTKMKAIDT
Trigger: TGTGTCAATCGCCTTCATTTTAGTGAAGTTTCCACTCGCCTGTCATGCATACAACTTCGGAGGAGGAGATGATCGTTTGGCAGATGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462301.1
CDS-3UTR CAA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACATTGGTTCTGCGAGCTaGCTTTCCGTCCACACCATC +
Preference number: 5 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDIGSAS*LSVHTI
Trigger: GATGGTGTGGACGGAAAGCAAGCTCGCAGAACCAAT...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTGCAACCAATTCAAAGTaGGACACCGGGTACTACTCA +
Preference number: 5 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCATNSK*DTGYYS
Trigger: TGAGTAGTACCCGGTGTCCAACTTTGAATTGGTTGC...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACTTCCCTATACTAGGTTaGGACTACTGCTACTCCCGC +
Preference number: 5 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDFPILG*DYCYSR
Trigger: GCGGGAGTAGCAGTAGTCCAAACCTAGTATAGGGAA...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GGGAAGGCGGGCAGCAGGGAGTTTACATGTTGGCAATCATTCATTGCCTTTCCCAATTTCACTTTCCCCTaGTTGACAGCTACTTTTCTT +
Preference number: 5 (lower is better)
Translates to: GKAGSREFTCWQSFIAFPNFTFP*LTATFL
Trigger: AAGAAAAGTAGCTGTCAACAAGGGGAAAGTGAAATT...GGGAAAGGCAATGAATGATTGCCAACATGTAAACTCCCTGCTGCCCGCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTACCTACTGCATTACTTaGGGGTTTCACAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCTYCIT*GFHSSR
Trigger: TCTGCTGCTGTGAAACCCCAAAGTAATGCAGTAGGT...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTTACAGAGAAAGTGGATaGGTATCCACAGCACTGTAC +
Preference number: 5 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCYRESG*VSTALY
Trigger: GTACAGTGCTGTGGATACCAATCCACTTTCTCTGTA...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACTACAGAGAAAGTGGATaGGTATCCACAGCACTGTAC +
Preference number: 5 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHYRESG*VSTALY
Trigger: GTACAGTGCTGTGGATACCAATCCACTTTCTCTGTA...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGACCCATCAAGCTTACTTaGTTCCCCCTGGCACGTTCC +
Preference number: 5 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRPIKLT*FPLARS
Trigger: GGAACGTGCCAGGGGGAACAAAGTAAGCTTGATGGG...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACGTTGGCAATCATTCATaGCCTTTCCCTTTACCCAGA +
Preference number: 5 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHVGNHS*PFPLPR
Trigger: TCTGGGTAAAGGGAAAGGCAATGAATGATTGCCAAC...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTGCCATTAGCAGAAAATaGAATACGACCAGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCAISRK*NTTSRK
Trigger: CTTTCTGCTGGTCGTATTCAATTTTCTGCTAATGGC...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATACCGGGTACTACTCATTaGGCAAACAATCAGCTGACA +
Preference number: 5 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIPGTTH*ANNQLT
Trigger: TGTCAGCTGATTGTTTGCCAAATGAGTAGTACCCGG...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAGCAACCAATTCAAAGTaGGACACCGGGTACTACTCA +
Preference number: 5 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIATNSK*DTGYYS
Trigger: TGAGTAGTACCCGGTGTCCAACTTTGAATTGGTTGC...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATTTCCCTATACTAGGTTaGGACTACTGCTACTCCCGC +
Preference number: 5 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHFPILG*DYCYSR
Trigger: GCGGGAGTAGCAGTAGTCCAAACCTAGTATAGGGAA...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GAAGAGCCAACAAATCCAATTCCCACAGCTCCATGCAAGGAAGAAGCATATCACCAGGTGTATGCAACTTaGGTCAGCAGAAACACAATA +
Preference number: 5 (lower is better)
Translates to: EEPTNPIPTAPCKEEAYHQVYAT*VSRNTI
Trigger: TATTGTGTTTCTGCTGACCAAAGTTGCATACACCTG...GTGATATGCTTCTTCCTTGCATGGAGCTGTGGGAATTGGATTTGTTGGCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS GCA 90 bp GCCAGCCAAGTAGGAAATACCTTTACTATAGTGTTCCAGAATGGATaGATGACATACAGAGAAAGTGGATTGGTATCCACAGCACTGTAC +
Preference number: 5 (lower is better)
Translates to: ASQVGNTFTIVFQNG*MTYRESGLVSTALY
Trigger: GTACAGTGCTGTGGATACCAATCCACTTTCTCTGTATGTCATGCATCCATTCTGGAACACTATAGTAAAGGTATTTCCTACTTGGCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260585.12
ENST00000447170.1
ENST00000613142.4
CDS-3UTR CAA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTCCGGGTACTACTCATTaGGCAAACAATCAGCTGACA +
Preference number: 5 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPPGTTH*ANNQLT
Trigger: TGTCAGCTGATTGTTTGCCAAATGAGTAGTACCCGG...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TTGGCTGTTTGGGGACCCAAAGTCAAAAGTTCCAGCCCATCAAGCTTACTTTGTAAGAGAAACCAGTATTaGGCAACTGTCTGTTGTTTG +
Preference number: 5 (lower is better)
Translates to: LAVWGPKVKSSSPSSLLCKRNQY*ATVCCL
Trigger: CAAACAACAGACAGTTGCCAAATACTGGTTTCTCTT...ACAAAGTAAGCTTGATGGGCTGGAACTTTTGACTTTGGGTCCCCAAACAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAGTTGGCAATCATTCATaGCCTTTCCCTTTACCCAGA +
Preference number: 5 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIVGNHS*PFPLPR
Trigger: TCTGGGTAAAGGGAAAGGCAATGAATGATTGCCAAC...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS GCA 90 bp GCCAGCCAAGTAGGAAATACCTTTACTATAGTGTTCCAGAATGGATaGATGACATACAGAGAAAGTGGATTGGTATCCACAGCACTGTAT +
Preference number: 5 (lower is better)
Translates to: ASQVGNTFTIVFQNG*MTYRESGLVSTALY
Trigger: ATACAGTGCTGTGGATACCAATCCACTTTCTCTGTATGTCATGCATCCATTCTGGAACACTATAGTAAAGGTATTTCCTACTTGGCTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442141.5
CDS-3UTR CAA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGATCCACAGCACTGTACTaGTACTTATCAAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRSTALY*YLSKPA
Trigger: GGCTGGCTTTGATAAGTACAAGTACAGTGCTGTGGA...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGAGAAAAAGTTATCAGATaGGGCGCCAGCCAAGTAGGA +
Preference number: 5 (lower is better)
Translates to: YHNLKRHFLQVYATLVSREKVIR*GASQVG
Trigger: TCCTACTTGGCTGGCGCCCAATCTGATAACTTTTTC...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATACTAGTCAATCTGAGTTaGGTTTCCTCAATGAGAAGG +
Preference number: 5 (lower is better)
Translates to: FRIGVTLDIHSPPLNASILVNLS*VSSMRR
Trigger: CCTTCTCATTGAGGAAACCAAACTCAGATTGACTAG...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260585.12
CDS-3UTR CAA 90 bp CAAAGCTCTTTCTGGCTCACACAACCCATGGTTAAAGGAAAATGGGAAAGTGACCAATTCATATTTGATTaGGCCATGATTCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: QSSFWLTQPMVKGKWESDQFIFD*AMIPPP
Trigger: AGGTGGAGGAATCATGGCCAAATCAAATATGAATTG...GTCACTTTCCCATTTTCCTTTAACCATGGGTTGTGTGAGCCAGAAAGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCATTGGCATGCAAACATATTCCAGTaGCTCAAGCGGTGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: GKEKPVFGNCLLFGNHWHANIFQ*LKRCCF
Trigger: GAAACAACACCGCTTGAGCAACTGGAATATGTTTGC...ATGCCAATGATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATATTCCTAGATCTGAGTTaGGTTTCCTCAATGAGAAGG +
Preference number: 5 (lower is better)
Translates to: FRIGVTLDIHSPPLNASIFLDLS*VSSMRR
Trigger: CCTTCTCATTGAGGAAACCAAACTCAGATCTAGGAA...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613142.4
CDS CCA 90 bp CTTTACTATAGTGTTCCAGAATGGATGCATGACATACAGAGAAAGTaGATTGGTATCCACAGCACTGTACTTGTACTTATCAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LYYSVPEWMHDIQRK*IGIHSTVLVLIKAS
Trigger: GCTGGCTTTGATAAGTACAAGTACAGTGCTGTGGATACCAATCCACTTTCTCTGTATGTCATGCATCCATTCTGGAACACTATAGTAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260585.12
ENST00000447170.1
ENST00000613142.4
CDS-3UTR CAA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAAATGGAATCGTCCTCTaGTTTCAGAACACTACAGAA +
Preference number: 5 (lower is better)
Translates to: FRIGVTLDIHSPPLNASINGIVL*FQNTTE
Trigger: TTCTGTAGTGTTCTGAAACAAGAGGACGATTCCATT...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTAAAGGGAGTGCTAGAATaGGTTCTGCGAGCTTGCTTT +
Preference number: 5 (lower is better)
Translates to: FYYTVQGQESLWSKFVILKGVLE*VLRACF
Trigger: AAAGCAAGCTCGCAGAACCAATTCTAGCACTCCCTT...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TTTAGAATTGGGGTAACTCTAGACATACACTCCCCTCCTCTCAATGCCTCTATAAATTTCACTTTCCCCTaGTTGACAGCTACTTTTCTT +
Preference number: 5 (lower is better)
Translates to: FRIGVTLDIHSPPLNASINFTFP*LTATFL
Trigger: AAGAAAAGTAGCTGTCAACAAGGGGAAAGTGAAATT...TATAGAGGCATTGAGAGGAGGGGAGTGTATGTCTAGAGTTACCCCAATTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCTTTCTGTATCTGTTTTaGGCTGTTTGGGGACCCAAA +
Preference number: 5 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIFLYLF*AVWGPK
Trigger: TTTGGGTCCCCAAACAGCCAAAAACAGATACAGAAA...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TACCATAACCTAAAAAGACACTTCTTACAGGTGTATGCAACTTTGGTCAGCAGATTTCTGTATCTGTTTTaGGCTGTTTGGGGACCCAAA +
Preference number: 5 (lower is better)
Translates to: YHNLKRHFLQVYATLVSRFLYLF*AVWGPK
Trigger: TTTGGGTCCCCAAACAGCCAAAAACAGATACAGAAA...TCTGCTGACCAAAGTTGCATACACCTGTAAGAAGTGTCTTTTTAGGTTATGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCCAGGGAGTTTACATGTaGGCAATCATTCATTGCCTT +
Preference number: 5 (lower is better)
Translates to: IFRGKRNQYLATVCCLVIQGVYM*AIIHCL
Trigger: AAGGCAATGAATGATTGCCAACATGTAAACTCCCTG...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp CAACAGGACCAAGCTAAACAATTCATATTTGATTTGGCCATGATTCCTCCACCTATCGGCATACTCTCTTaGTACATCACATTATCTGAC +
Preference number: 5 (lower is better)
Translates to: QQDQAKQFIFDLAMIPPPIGILS*YITLSD
Trigger: GTCAGATAATGTGATGTACAAAGAGAGTATGCCGAT...AGGTGGAGGAATCATGGCCAAATCAAATATGAATTGTTTAGCTTGGTCCTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAAGGCTCCTTCTACAACTaGGTTAGTGACATCAAGTAC +
Preference number: 5 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKGSFYN*VSDIKY
Trigger: GTACTTGATGTCACTAACCAAGTTGTAGAAGGAGCC...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp ATTTTCAGGGGAAAGAGAAACCAGTATTTGGCAACTGTCTGTTGTTTGGTAATCAATGGAATCGTCCTCTaGTTTCAGAACACTACAGAA +
Preference number: 5 (lower is better)
Translates to: IFRGKRNQYLATVCCLVINGIVL*FQNTTE
Trigger: TTCTGTAGTGTTCTGAAACAAGAGGACGATTCCATT...GATTACCAAACAACAGACAGTTGCCAAATACTGGTTTCTCTTTCCCCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAACAGGGAGTTTACATGTaGGCAATCATTCATTGCCTT +
Preference number: 5 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKQGVYM*AIIHCL
Trigger: AAGGCAATGAATGATTGCCAACATGTAAACTCCCTG...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAATTCACTTTCCCCTTGTaGACAGCTACTTTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKFTFPL*TATFLS
Trigger: TGAAAGAAAAGTAGCTGTCAACAAGGGGAAAGTGAA...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp TTTTACTATACTGTACAAGGTCAAGAAAGCCTGTGGTCCAAGTTTGTCATTTTATTCACTTTCCCCTTGTaGACAGCTACTTTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: FYYTVQGQESLWSKFVILFTFPL*TATFLS
Trigger: TGAAAGAAAAGTAGCTGTCAACAAGGGGAAAGTGAA...TAAAATGACAAACTTGGACCACAGGCTTTCTTGACCTTGTACAGTATAGTAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS-3UTR CAA 90 bp GTTCCAAATATGAAAACACACTGTGGTTTTCTGAGTGTTATCAGTGTTCTGAAACAATTCATATTTGATTaGGCCATGATTCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: VPNMKTHCGFLSVISVLKQFIFD*AMIPPP
Trigger: AGGTGGAGGAATCATGGCCAAATCAAATATGAATTG...TTTCAGAACACTGATAACACTCAGAAAACCACAGTGTGTTTTCATATTTGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS TCA 72 bp GCGCCCACTCGGCAGCGACTCCCGGCTACAAGGCTGTaGCACACAAGCACCACACCGGCTGGGCAAGGATGG +
Preference number: 6 (lower is better)
Translates to: APTRQRLPATRL*HTSTTPAGQGW
Trigger: CCATCCTTGCCCAGCCGGTGTGGTGCTTGTGTGTCACAGCCTTGTAGCCGGGAGTCGCTGCCGAGTGGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS CCA 72 bp CAAGCACCACACCGGCTGGGCAAGGATGGCAAAGACTaGGCTGCCCGAGAAGGTAGGAGAGCCGCGCTCCGC +
Preference number: 6 (lower is better)
Translates to: QAPHRLGKDGKD*AAREGRRAALR
Trigger: GCGGAGCGCGGCTCTCCTACCTTCTCGGGCAGCCCAGTCTTTGCCATCCTTGCCCAGCCGGTGTGGTGCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613142.4
CDS CCA 72 bp TCCCTGCCGGGAGCAGAAGTGGAGACATCAGCAGGATaGCATCGGCAAGTCGCTCCCCTCCCGGGCCTCATC +
Preference number: 6 (lower is better)
Translates to: SLPGAEVETSAG*HRQVAPLPGLI
Trigger: GATGAGGCCCGGGAGGGGAGCGACTTGCCGATGCCATCCTGCTGATGTCTCCACTTCTGCTCCCGGCAGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462301.1
CDS GCA 72 bp GGCCCTAGCGCCACAAGCTGCCGCTTAGGAAGTCCCTaGCGGGAGCAGAAGTGGAGACATCAGCAGGATGGC +
Preference number: 6 (lower is better)
Translates to: GPSATSCRLGSP*REQKWRHQQDG
Trigger: GCCATCCTGCTGATGTCTCCACTTCTGCTCCCGGCAGGGACTTCCTAAGCGGCAGCTTGTGGCGCTAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462301.1
CDS CCA 72 bp GGCTACAAGGCTGTGACACACAAGCACCACACCGGCTaGGCAAGGATGGCAAAGACTGGGCTGCCCGAGAAG +
Preference number: 6 (lower is better)
Translates to: GYKAVTHKHHTG*ARMAKTGLPEK
Trigger: CTTCTCGGGCAGCCCAGTCTTTGCCATCCTTGCCCAGCCGGTGTGGTGCTTGTGTGTCACAGCCTTGTAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613142.4
CDS GCA 72 bp TGGCATCGGCAAGTCGCTCCCCTCCCGGGCCTCATCTaGCAAACGATCATCTCCTCCTCCGAAGTTGTATGC +
Preference number: 6 (lower is better)
Translates to: WHRQVAPLPGLI*QTIISSSEVVC
Trigger: GCATACAACTTCGGAGGAGGAGATGATCGTTTGGCAGATGAGGCCCGGGAGGGGAGCGACTTGCCGATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462301.1
CDS TCA 72 bp TTCCGTCCACACCATCTAGAGTGTAGGCTACGAAGTTaGGGATGCCCACTACAATCCAAACCCAGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: FRPHHLECRLRS*GCPLQSKPSQA
Trigger: TGCCTGACTGGGTTTGGATTGTAGTGGGCATCCTCAACTTCGTAGCCTACACTCTAGATGGTGTGGACGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260585.12
ENST00000442141.5
ENST00000613142.4
CDS TCA 72 bp CACATAATGCACAACCTAGAGTGTAGGCTACGAAGTTaGGGATGCCCACTACAATCCAAACCCAGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: HIMHNLECRLRS*GCPLQSKPSQA
Trigger: TGCCTGACTGGGTTTGGATTGTAGTGGGCATCCTCAACTTCGTAGCCTACACTCTAGGTTGTGCATTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447170.1
CDS TCA 72 bp GCCAAACGATCATCTCCTCCTCCGAAGTTGTATGCATaGCAGGCGAGTGGAAACTTCACTAAAATGAAGGCG +
Preference number: 6 (lower is better)
Translates to: AKRSSPPPKLYA*QASGNFTKMKA
Trigger: CGCCTTCATTTTAGTGAAGTTTCCACTCGCCTGTCATGCATACAACTTCGGAGGAGGAGATGATCGTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462301.1
CDS CAA 90 bp AGGAACCAGCAACCAATTCAAAGTTGGACACCGGGTACTACTCATTaGGCAAACAATCAGCTGACATGTACTGTTGGCAAAAGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: RNQQPIQSWTPGTTH*ANNQLTCTVGKSCS
Trigger: GGAACAGCTTTTGCCAACAGTACATGTCAGCTGATTGTTTGCCAAATGAGTAGTACCCGGTGTCCAACTTTGAATTGGTTGCTGGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS CAA 90 bp CCACTAAGACAACCAAGAAGAGAGGAACCAGCAACCAATTCAAAGTaGGACACCGGGTACTACTCATTTGGCAAACAATCAGCTGACATG +
Preference number: 6 (lower is better)
Translates to: PLRQPRREEPATNSK*DTGYYSFGKQSADM
Trigger: CATGTCAGCTGATTGTTTGCCAAATGAGTAGTACCCGGTGTCCAACTTTGAATTGGTTGCTGGTTCCTCTCTTCTTGGTTGTCTTAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS TCA 72 bp TGTATGCATGACAGGCGAGTGGAAACTTCACTAAAATaGAGGCGATTGACACAACAGAAGGAACTCCATCCT +
Preference number: 6 (lower is better)
Translates to: CMHDRRVETSLK*RRLTQQKELHP
Trigger: AGGATGGAGTTCCTTCTGTTGTGTCAATCGCCTTCATTTTAGTGAAGTTTCCACTCGCCTGTCATGCATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462301.1
CDS GCA 72 bp GTTTCCTCAATGAGAAGGGGTAAATCTGAAAATGGCTaGTCAGCTGCTTTACCACTCGTACTCCATAATGGA +
Preference number: 6 (lower is better)
Translates to: VSSMRRGKSENG*SAALPLVLHNG
Trigger: TCCATTATGGAGTACGAGTGGTAAAGCAGCTGAGCAGCCATTTTCAGATTTACCCCTTCTCATTGAGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS CCA 72 bp AACCAAGAAGAGAGGAACCAGCAACCAATTCAAAGTTaGACACCGGGTACTACTCATTTGGCAAACAATCAG +
Preference number: 6 (lower is better)
Translates to: NQEERNQQPIQS*TPGTTHLANNQ
Trigger: CTGATTGTTTGCCAAATGAGTAGTACCCGGTGTCCAACTTTGAATTGGTTGCTGGTTCCTCTCTTCTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS CAA 72 bp CAACCAATTCAAAGTTGGACACCGGGTACTACTCATTaGGCAAACAATCAGCTGACATGTACTGTTGGCAAA +
Preference number: 6 (lower is better)
Translates to: QPIQSWTPGTTH*ANNQLTCTVGK
Trigger: TTTGCCAACAGTACATGTCAGCTGATTGTTTGCCAAATGAGTAGTACCCGGTGTCCAACTTTGAATTGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4
CDS CAA 72 bp AATACGACCAGCAGAAAGCCAGAAAAAGTTATCAGATaGGGCGCCAGCCAAGTAGGAAATACCTTTACTATA +
Preference number: 6 (lower is better)
Translates to: NTTSRKPEKVIR*GASQVGNTFTI
Trigger: TATAGTAAAGGTATTTCCTACTTGGCTGGCGCCCAATCTGATAACTTTTTCTGGCTTTCTGCTGGTCGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260585.12
ENST00000442141.5
ENST00000447170.1
ENST00000613142.4
CDS CAA 90 bp AGAAAATTGAATACGACCAGCAGAAAGCCAGAAAAAGTTATCAGATaGGGCGCCAGCCAAGTAGGAAATACCTTTACTATAGTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: RKLNTTSRKPEKVIR*GASQVGNTFTIVFQ
Trigger: CTGGAACACTATAGTAAAGGTATTTCCTACTTGGCTGGCGCCCAATCTGATAACTTTTTCTGGCTTTCTGCTGGTCGTATTCAATTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260585.12
ENST00000442141.5
ENST00000447170.1
ENST00000613142.4
CDS CAA 72 bp TTCCAGAATGGATGCATGACATACAGAGAAAGTGGATaGGTATCCACAGCACTGTACTTGTACTTATCAAAG +
Preference number: 6 (lower is better)
Translates to: FQNGCMTYRESG*VSTALYLYLSK
Trigger: CTTTGATAAGTACAAGTACAGTGCTGTGGATACCAATCCACTTTCTCTGTATGTCATGCATCCATTCTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260585.12
ENST00000447170.1
ENST00000613142.4
CDS CCA 72 bp CCAAGTAGGAAATACCTTTACTATAGTGTTCCAGAATaGATGCATGACATACAGAGAAAGTGGATTGGTATC +
Preference number: 6 (lower is better)
Translates to: PSRKYLYYSVPE*MHDIQRKWIGI
Trigger: GATACCAATCCACTTTCTCTGTATGTCATGCATCCATTCTGGAACACTATAGTAAAGGTATTTCCTACTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260585.12
ENST00000442141.5
ENST00000447170.1
ENST00000613142.4
CDS TCA 72 bp AAACTACCCATAGCAGGAGATAAAGAACAAAAACACTaGCACCAGTTGATCCTCTTCCAAAGATGGAATAAA +
Preference number: 6 (lower is better)
Translates to: KLPIAGDKEQKH*HQLILFQRWNK
Trigger: TTTATTCCATCTTTGGAAGAGGATCAACTGGTGTCAGTGTTTTTGTTCTTTATCTCCTGCTATGGGTAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260585.12
ENST00000613142.4