RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SELENBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000143416

Ensembl transcript IDs: ENST00000368868.10, ENST00000423070.5, ENST00000424475.5, ENST00000426705.6, ENST00000427867.2, ENST00000427977.6, ENST00000443708.5, ENST00000447402.7, ENST00000455397.5, ENST00000455839.5, ENST00000458566.5, ENST00000463664.5, ENST00000470345.5, ENST00000473693.5, ENST00000474352.5, ENST00000492643.5, ENST00000493560.5, ENST00000498494.1

Found 834 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCATGTACCTCCCTCGTTCTTGTAGAAGCGCTGGATGGTGGAGCTaGGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCA +
Preference number: 1 (lower is better)
Translates to: TMYLPRSCRSAGWWS*VRSPQSLGQRLGCA
Trigger: TGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAACGAGGGAGGTACATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR GCA 90 bp TGTACCTCCCTCGTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTaGGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAA +
Preference number: 1 (lower is better)
Translates to: CTSLVLVEALDGGAE*AAHKALGSVWVVQE
Trigger: TTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAACGAGGGAGGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR CCA 90 bp AATGCTGCCTCCGAGGAAGAGCTGTCCTGTGAGGCGGGGTCTCTGTaGGTCAGAGATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTT +
Preference number: 1 (lower is better)
Translates to: NAASEEELSCEAGSL*VRDVILPQVPMQPV
Trigger: AACTGGCTGCATGGGGACCTGAGGCAGTATGACATCTCTGACCCACAGAGACCCCGCCTCACAGGACAGCTCTTCCTCGGAGGCAGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR GCA 90 bp CATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTaGAGCACCCCCAGGTCTCTCCCATGTCCCCTTCACCTCGAACGT +
Preference number: 1 (lower is better)
Translates to: HDIVSRLVPEVIAQR*STPRSLPCPLHLER
Trigger: ACGTTCGAGGTGAAGGGGACATGGGAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
3UTR GCA 90 bp ACTAGGGGCTCTGGCTGGGACTTTAGTTCCTCGTCCTCCAGCACTTaGACAGGGCCTCCCTTAACAATGCTGCCTCCGAGGAAGAGCTGT +
Preference number: 1 (lower is better)
Translates to: TRGSGWDFSSSSSST*TGPPLTMLPPRKSC
Trigger: ACAGCTCTTCCTCGGAGGCAGCATTGTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR CCA 90 bp GATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTaGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAGCCCATCTTT +
Preference number: 1 (lower is better)
Translates to: DGGAECAAHKALGSV*VVQEADLQGNKPIF
Trigger: AAAGATGGGCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR GCA 90 bp GAGCTGAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTaGAGGAAGCGGATCTCCAAGGGAATAAGCCCATCTTTTAGAGAC +
Preference number: 1 (lower is better)
Translates to: ELSAQPTKPWAASGL*RKRISKGISPSFRD
Trigger: GTCTCTAAAAGATGGGCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR GCA 90 bp ACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGCCAGGTCC +
Preference number: 1 (lower is better)
Translates to: TQHIATVSAWLCGTC*QGSGAKREQNEARS
Trigger: GGACCTGGCTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR CCA 90 bp CAAGGGCTGGGCCAAGGGGCTCCTTCCCGAAGTCCACCAGGAAGTTaGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCT +
Preference number: 1 (lower is better)
Translates to: QGLGQGAPSRSPPGS*GSTSALLLLCLHQP
Trigger: AGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGCCCCTTGGCCCAGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR GCA 90 bp ATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGCCAGG +
Preference number: 1 (lower is better)
Translates to: MTQHIATVSAWLCGT*CQGSGAKREQNEAR
Trigger: CCTGGCTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR GCA 90 bp ATAAGCCCATCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTaGCAGTCCCATACATATAAGTGGCTCCCGTACAGTCCAGCCTCC +
Preference number: 1 (lower is better)
Translates to: ISPSFRDRVCTISWR*QSHTYKWLPYSPAS
Trigger: GGAGGCTGGACTGTACGGGAGCCACTTATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR GCA 90 bp AAGCGGATCTCCAAGGGAATAAGCCCATCTTTTAGAGACAGGGTCTaGACAATCTCATGGCGCTGCCAGTCCCATACATATAAGTGGCTC +
Preference number: 1 (lower is better)
Translates to: KRISKGISPSFRDRV*TISWRCQSHTYKWL
Trigger: GAGCCACTTATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCTTATTCCCTTGGAGATCCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR GCA 90 bp ATAAGCCCATCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTaGCAGTCCCATACATATAAGTGGCTCCCGTACAGTCCTTTGCCA +
Preference number: 1 (lower is better)
Translates to: ISPSFRDRVCTISWR*QSHTYKWLPYSPLP
Trigger: TGGCAAAGGACTGTACGGGAGCCACTTATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455397.5
3UTR CCA 90 bp AAGGGAATAAGCCCATCTTTTAGAGACAGGGTCTGCACAATCTCATaGCGCTGCCAGTCCCATACATATAAGTGGCTCCCGTACAGTCCA +
Preference number: 1 (lower is better)
Translates to: KGISPSFRDRVCTIS*RCQSHTYKWLPYSP
Trigger: TGGACTGTACGGGAGCCACTTATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCTTATTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR CCA 90 bp AAGGGAATAAGCCCATCTTTTAGAGACAGGGTCTGCACAATCTCATaGCGCTGCCAGTCCCATACATATAAGTGGCTCCCGTACAGTCCT +
Preference number: 1 (lower is better)
Translates to: KGISPSFRDRVCTIS*RCQSHTYKWLPYSP
Trigger: AGGACTGTACGGGAGCCACTTATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCTTATTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455397.5
3UTR CCA 90 bp TCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTaGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGC +
Preference number: 1 (lower is better)
Translates to: SKSSWKSSTVSNKQQ*SVNVYDSTHCHSLS
Trigger: GCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR CCA 90 bp AAGGACAGGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATaGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAAT +
Preference number: 1 (lower is better)
Translates to: KDRVTSLFLGASKSS*KSSTVSNKQQWSVN
Trigger: ATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCCTGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000447402.7
3UTR-3UTR TCA 90 bp GCCATTGCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGCGTCTCCCAGGGAGCTaGTCATCACTTCCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: AIALDVSQGADHHFPAGQRLPGS*SSLPRW
Trigger: CCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACG...CTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGCAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
3UTR-3UTR GCA 90 bp ATGCTGCCTCCGAGGAAGAGCTGTCCTGTGAGGCGGGGTCTCTGTGGGTCAGAGTGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCC +
Preference number: 2 (lower is better)
Translates to: MLPPRKSCPVRRGLCGSEWLCGT*CQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCA...CTCTGACCCACAGAGACCCCGCCTCACAGGACAGCTCTTCCTCGGAGGCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp CAGGATGTCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTCCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCC +
Preference number: 2 (lower is better)
Translates to: QDVGDQAWHFGQQPALHFPLARQ*LVWRKA
Trigger: GGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGG...AAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGACATCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp TTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGGCTGTCATCACTTCCCCGCTaGCCAGGCAGTGGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: LTSPRELIITSPLARQWLSSLPR*PGSGWC
Trigger: ACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGA...CAGCCACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
3UTR-3UTR CCA 90 bp GCCATTGCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGAGGCAGTGGCTGGTGTaGAGAAAGGCCAGTTCGCAC +
Preference number: 2 (lower is better)
Translates to: AIALDVSQGADHHFPAGQRQWLV*RKASSH
Trigger: GTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT...CTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGCAATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
3UTR-3UTR CCA 90 bp ATGCTGCCTCCGAGGAAGAGCTGTCCTGTGAGGCGGGGTCTCTGTGGGTCAGAGTGGCCAGGCAGTGGCTaGTGTGGAGAAAGGCCAGTT +
Preference number: 2 (lower is better)
Translates to: MLPPRKSCPVRRGLCGSEWPGSG*CGERPV
Trigger: AACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCA...CTCTGACCCACAGAGACCCCGCCTCACAGGACAGCTCTTCCTCGGAGGCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp CCAGGCACTGTACAGCGACGTGGTGATGTAGAGGCGCTTCCCATCCAGGCTGAGGTCGGTGATCAGGCCTaGCATTTCGGGCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: PGTVQRRGDVEALPIQAEVGDQA*HFGQQP
Trigger: TGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGAC...CTCAGCCTGGATGGGAAGCGCCTCTACATCACCACGTCGCTGTACAGTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR CAA 90 bp GTAGAAGCGCTGGATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTaGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAAT +
Preference number: 2 (lower is better)
Translates to: VEALDGGAECAAHKA*GSVWVVQEADLQGN
Trigger: ATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp CCAGGCACTGTACAGCGACGTGGTGATGTAGAGGCGCTTCCCATCCAGGCTGAGGATGGTGGAGCTGAGTaGGCAGCCCACAAAGCCTTG +
Preference number: 2 (lower is better)
Translates to: PGTVQRRGDVEALPIQAEDGGAE*AAHKAL
Trigger: CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATC...CTCAGCCTGGATGGGAAGCGCCTCTACATCACCACGTCGCTGTACAGTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGGGCTGGGCCACAGTCTCAGCTTaGCTGTGTGGTACATGCTGC +
Preference number: 2 (lower is better)
Translates to: DVRATIAPRVAELMGKGWATVSA*LCGTCC
Trigger: GCAGCATGTACCACACAGCCAAGCTGAGACTGTGGC...CCAGCCCTTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp TTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGGCTGGCCACAGTCTCAGCTTaGCTGTGTGGTACATGCTGC +
Preference number: 2 (lower is better)
Translates to: LTSPRELIITSPLARQWLATVSA*LCGTCC
Trigger: GCAGCATGTACCACACAGCCAAGCTGAGACTGTGGC...CAGCCACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GCCACCCGTTTTCCCTTGACCACTAGGGGCTCTGGCTGGGACTTTAGTTCCTCGCAGCCCACAAAGCCTTaGGCAGCGTCTGGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: ATRFPLTTRGSGWDFSSSQPTKP*AASGLC
Trigger: GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTG...CGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp CCAGCCACCCGTTTTCCCTTGACCACTAGGGGCTCTGGCTGGGACTTTAGTTCCGTCGGTGATCAGGCCTaGCATTTCGGGCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: PATRFPLTTRGSGWDFSSVGDQA*HFGQQP
Trigger: TGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGAC...GGAACTAAAGTCCCAGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTCCCAGGCCAGTTCGCACTTaGCATGGATGTCCTTGGGCT +
Preference number: 2 (lower is better)
Translates to: EAGTRSHSPTVQHPQVSPRPVRT*HGCPWA
Trigger: AGCCCAAGGACATCCATGCCAAGTGCGAACTGGCCT...GGGAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455839.5
3UTR-3UTR TCA 90 bp TCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAGCTGCCCACTCACGTCTCCCAGGGAGCTaGTCATCACTTCCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: STSAGLKPSRKTLGAAHSRLPGS*SSLPRW
Trigger: CCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACG...TGAGTGGGCAGCTCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
3UTR-3UTR GCA 90 bp TCATGGCGCTGCCAGTCCCATACATATAAGTGGCTCCCGTACAGTCCAGCCTCCTGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCC +
Preference number: 2 (lower is better)
Translates to: SWRCQSHTYKWLPYSPASWLCGT*CQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCA...GGAGGCTGGACTGTACGGGAGCCACTTATATGTATGGGACTGGCAGCGCCATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR GCA 90 bp CAGTCCCATACATATAAGTGGCTCCCGTACAGTCCAGCCTCCACATCAGCGGGGGTCATAGCCCAACGGTaGAGCACCCCCAGGTCTCTC +
Preference number: 2 (lower is better)
Translates to: QSHTYKWLPYSPASTSAGVIAQR*STPRSL
Trigger: GAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGAC...CCCCGCTGATGTGGAGGCTGGACTGTACGGGAGCCACTTATATGTATGGGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CCA 90 bp AGGGGCTCCTTCCCGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTGGCCAGGCAGTGGCTaGTGTGGAGAAAGGCCAGTT +
Preference number: 2 (lower is better)
Translates to: RGSFPKSTRKLGFNFSPPWPGSG*CGERPV
Trigger: AACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCA...AGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GACATTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCC +
Preference number: 2 (lower is better)
Translates to: DIGSCPLSADHDIVSRLVPLARQ*LVWRKA
Trigger: GGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGG...TACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
3UTR-3UTR TCA 90 bp TACAGTCCAGCCTCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGACGTCTCCCAGGGAGCTaGTCATCACTTCCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: YSPASTSAGLKPSRKTLGRLPGS*SSLPRW
Trigger: CCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACG...TCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
3UTR-3UTR GCA 90 bp ATGCAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATGTCGATGGTGGAGCTGAGTaGGCAGCCCACAAAGCCTTG +
Preference number: 2 (lower is better)
Translates to: MQPVAEVEEAVVQGEQDVDGGAE*AAHKAL
Trigger: CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATC...GACATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp TACAGTCCAGCCTCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAGGCTCAATGACCTTGTaGAGCTTTGGGGCCCGGGGC +
Preference number: 2 (lower is better)
Translates to: YSPASTSAGLKPSRKTLGGSMTL*SFGARG
Trigger: GCCCCGGGCCCCAAAGCTGCACAAGGTCATTGAGCC...TCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455839.5
3UTR-3UTR CCA 90 bp AAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAGCAGGCAGTGGCTGGTGTaGAGAAAGGCCAGTTCGCAC +
Preference number: 2 (lower is better)
Translates to: KPWAASGLCRKRISKGISRQWLV*RKASSH
Trigger: GTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT...GCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp TCCCTCGTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTGCGCAGCCCACAAAAGGCAGTGGCTGGTGTaGAGAAAGGCCAGTTCGCAC +
Preference number: 2 (lower is better)
Translates to: SLVLVEALDGGAECAAHKRQWLV*RKASSH
Trigger: GTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT...TTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAACGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp ATGCAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATGTCTGGCCAGGCAGTGGCTaGTGTGGAGAAAGGCCAGTT +
Preference number: 2 (lower is better)
Translates to: MQPVAEVEEAVVQGEQDVWPGSG*CGERPV
Trigger: AACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCA...GACATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GGCCAGTTCGCACTTGGCATGGATGTCCTTGGGCTCAATGACCTTGTGCAGCTTTCATCACTTCCCCGCTaGCCAGGCAGTGGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: GQFALGMDVLGLNDLVQLSSLPR*PGSGWC
Trigger: ACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGA...AAGCTGCACAAGGTCATTGAGCCCAAGGACATCCATGCCAAGTGCGAACTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455839.5
3UTR-3UTR CCA 90 bp TCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAGCTGCCCACTCAGCCTTGGGCAGCGTCTaGGTTGTGCAGGAAGCGGAT +
Preference number: 2 (lower is better)
Translates to: STSAGLKPSRKTLGAAHSALGSV*VVQEAD
Trigger: ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC...TGAGTGGGCAGCTCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CCA 90 bp AAATCCAGATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGTCGGTGATCAGGCCTaGCATTTCGGGCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: KSRCQSYNRPQGSGAHGQVGDQA*HFGQQP
Trigger: TGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGAC...TTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATCTGGATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR CAA 90 bp GTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTaGTGCAGGAAGCGGATCTCCAAGGGAATAAGCCCATCTTTTAGA +
Preference number: 2 (lower is better)
Translates to: VELSAQPTKPWAASG*CRKRISKGISPSFR
Trigger: TCTAAAAGATGGGCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR TCA 90 bp AGAGATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAGTAGAGGAACGTCTCCCAGGGAGCTaGTCATCACTTCCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: RDVILPQVPMQPVAEVEERLPGS*SSLPRW
Trigger: CCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACG...TTCCTCTACTTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR TCA 90 bp CAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATGTCGGTCCACATCAGCGGGGTTaGAGCCATCTCGTAAGACAT +
Preference number: 2 (lower is better)
Translates to: QPVAEVEEAVVQGEQDVGPHQRG*SHLVRH
Trigger: ATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGG...ACCGACATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR GCA 90 bp GTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCATGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCC +
Preference number: 2 (lower is better)
Translates to: VGDEGGVQIQMSELQSPPWLCGT*CQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCA...TGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGTCGTCCTCCAGCACTTaGACAGGGCCTCCCTTAACA +
Preference number: 2 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMSSSST*TGPPLT
Trigger: TGTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGA...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp TCCCTCGTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTGCGCAGCCCACAAACTCAGCTTGGCTGTGTaGTACATGCTGCCAAGGGTC +
Preference number: 2 (lower is better)
Translates to: SLVLVEALDGGAECAAHKLSLAV*YMLPRV
Trigger: GACCCTTGGCAGCATGTACCACACAGCCAAGCTGAG...TTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAACGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGCTCAGCTTGGCTGTGTaGTACATGCTGCCAAGGGTC +
Preference number: 2 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMLSLAV*YMLPRV
Trigger: GACCCTTGGCAGCATGTACCACACAGCCAAGCTGAG...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CCA 90 bp TCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAGCTGCCCACTCATGGCCAGGCAGTGGCTaGTGTGGAGAAAGGCCAGTT +
Preference number: 2 (lower is better)
Translates to: STSAGLKPSRKTLGAAHSWPGSG*CGERPV
Trigger: AACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCA...TGAGTGGGCAGCTCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
3UTR-3UTR CCA 90 bp GCCACCCGTTTTCCCTTGACCACTAGGGGCTCTGGCTGGGACTTTAGTTCCTCGCATCTCGTAAGACATTaGGAGCTGCCCACTCAGTGC +
Preference number: 2 (lower is better)
Translates to: ATRFPLTTRGSGWDFSSSHLVRH*ELPTQC
Trigger: GCACTGAGTGGGCAGCTCCCAATGTCTTACGAGATG...CGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR TCA 90 bp GGGAGTGTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCACCCGTTTTCCCTTaGCCACTAGGGGCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: GSVGDEGGVQIQMSELQSPPVFP*PLGALA
Trigger: AGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGG...CGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCACACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGTGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCC +
Preference number: 2 (lower is better)
Translates to: WCLQELMEKQHSEQQATVWLCGT*CQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCA...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR GCA 90 bp GATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGGGCTGGTATGACTCAACACATTaGCACAGTCTCAGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: DVRATIAPRVAELMGKGWYDSTH*HSLSLA
Trigger: AGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATA...CCAGCCCTTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTCATAGCCCAACGGTaGAGCACCCCCAGGTCTCTC +
Preference number: 2 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSVIAQR*STPRSL
Trigger: GAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGAC...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR GCA 90 bp CCAGCCACCCGTTTTCCCTTGACCACTAGGGGCTCTGGCTGGGACTTTAGTTCCTTTAGAGACAGGGTCTaGACAATCTCATGGCGCTGC +
Preference number: 2 (lower is better)
Translates to: PATRFPLTTRGSGWDFSSFRDRV*TISWRC
Trigger: GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAA...GGAACTAAAGTCCCAGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp TGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGGCAGCGTCTGGGTTGTaGAGGAAGCGGATCTCCAAG +
Preference number: 2 (lower is better)
Translates to: WVMRVEFKSRCQSYNRPQAASGL*RKRISK
Trigger: CTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGC...CTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGTCAGAGATGTCATACTaGCTCAGGTCCCCATGCAGC +
Preference number: 2 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMSEMSY*LRSPCS
Trigger: GCTGCATGGGGACCTGAGGCAGTATGACATCTCTGA...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp TCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCCAGTCCCATACATATCCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCC +
Preference number: 2 (lower is better)
Translates to: SFRDRVCTISWRCQSHTYPLARQ*LVWRKA
Trigger: GGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGG...ATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GCCACCCGTTTTCCCTTGACCACTAGGGGCTCTGGCTGGGACTTTAGTTCCTCGTCCCATACATATAAGTaGCTCCCGTACAGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: ATRFPLTTRGSGWDFSSSSHTYK*LPYSPA
Trigger: GGCTGGACTGTACGGGAGCCACTTATATGTATGGGA...CGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CCA 90 bp GTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGGTCTGCACAATCTCATaGCGCTGCCAGTCCCATACA +
Preference number: 2 (lower is better)
Translates to: VLVEALDGGAECAAHKALVCTIS*RCQSHT
Trigger: TGTATGGGACTGGCAGCGCCATGAGATTGTGCAGAC...CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GGGAGTGTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCAGCCCACAAAGCCTTaGGCAGCGTCTGGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: GSVGDEGGVQIQMSELQSQPTKP*AASGLC
Trigger: GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTG...CGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCACACTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp TTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGGAGGCGGGGTCTCTGTaGGTCAGAGATGTCATACTG +
Preference number: 2 (lower is better)
Translates to: FKSRCQSYNRPQGSGAHGEAGSL*VRDVIL
Trigger: CAGTATGACATCTCTGACCCACAGAGACCCCGCCTC...CCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp AGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTCAGGCATCCAGGGCTaGGGGAAGAGTGGCTCATGC +
Preference number: 2 (lower is better)
Translates to: SADHDIVSRLVPEVIAQRSGIQG*GKSGSC
Trigger: GCATGAGCCACTCTTCCCCCAGCCCTGGATGCCTGA...CCGTTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455839.5
3UTR-3UTR TCA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCCGTCTCCCAGGGAGCTaGTCATCACTTCCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSRLPGS*SSLPRW
Trigger: CCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACG...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR TCA 90 bp TTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGGATCACCTTCTCCACTaGCCATGTACCTCCCTCGTT +
Preference number: 2 (lower is better)
Translates to: FKSRCQSYNRPQGSGAHGDHLLH*PCTSLV
Trigger: AACGAGGGAGGTACATGGTCAGTGGAGAAGGTGATC...CCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp AGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGCTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: SADHDIVSRLVPEVIAQRLCGTC*QGSGAK
Trigger: CTTGGCACCCGACCCTTGGCAGCATGTACCACACAG...CCGTTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR GCA 90 bp GCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAGCCCTATGACTCAACACATTaGCACAGTCTCAGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: ALGSVWVVQEADLQGNKPYDSTH*HSLSLA
Trigger: AGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATA...GGGCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp GCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGGAGTTTATTTCTTGGTaGCTCCAAGAGCTCATGGAA +
Preference number: 2 (lower is better)
Translates to: AHKALGSVWVVQEADLQGEFISW*LQELME
Trigger: TTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC...CCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp GTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGTTTAGAGACAGGGTCTaGACAATCTCATGGCGCTGC +
Preference number: 2 (lower is better)
Translates to: VLVEALDGGAECAAHKALFRDRV*TISWRC
Trigger: GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAA...CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGGTGTCTACATCAACCTaGAGCATCACAGAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMVSTST*SITEPS
Trigger: GGAAGGCTCTGTGATGCTGCAGGTTGATGTAGACAC...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp CCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCAGGCAGTGGCTGGTGTaGAGAAAGGCCAGTTCGCAC +
Preference number: 2 (lower is better)
Translates to: PLSADHDIVSRLVPEVIARQWLV*RKASSH
Trigger: GTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT...GGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
3UTR-3UTR CCA 90 bp CGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTAGCCTTGGGCAGCGTCTaGGTTGTGCAGGAAGCGGAT +
Preference number: 2 (lower is better)
Translates to: RSPPGSWGSTSALLLLCLALGSV*VVQEAD
Trigger: ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC...TAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR TCA 90 bp GGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCACACCACCCGTTTTCCCTTaGCCACTAGGGGCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: GFNFSPPFTVSTSTCSITPPVFP*PLGALA
Trigger: AGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGG...TGTGATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCTGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCC +
Preference number: 2 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSWLCGT*CQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCA...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR GCA 90 bp TCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCCAGTCCCATACATATGTCATAGCCCAACGGTaGAGCACCCCCAGGTCTCTC +
Preference number: 2 (lower is better)
Translates to: SFRDRVCTISWRCQSHTYVIAQR*STPRSL
Trigger: GAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGAC...ATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCACTCAGCTTGGCTGTGTaGTACATGCTGCCAAGGGTC +
Preference number: 2 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSLSLAV*YMLPRV
Trigger: GACCCTTGGCAGCATGTACCACACAGCCAAGCTGAG...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CCA 90 bp AACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCACAGAGCCTTCATCACTTCCCCGCTaGCCAGGCAGTGGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: NFSPPFTVSTSTCSITEPSSLPR*PGSGWC
Trigger: ACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGA...AGGCTCTGTGATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCACATCTCGTAAGACATTaGGAGCTGCCCACTCAGTGC +
Preference number: 2 (lower is better)
Translates to: VGDEGGVQIQMSELQSPPHLVRH*ELPTQC
Trigger: GCACTGAGTGGGCAGCTCCCAATGTCTTACGAGATG...TGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CCA 90 bp GTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATGCCTTGGGCAGCGTCTaGGTTGTGCAGGAAGCGGAT +
Preference number: 2 (lower is better)
Translates to: VGVQLQPSFYCVYINLQHALGSV*VVQEAD
Trigger: ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC...ATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp TGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGAGTCCACCAGGAAGTTaGGGTTCAACTTCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: WVMRVEFKSRCQSYNRPQSPPGS*GSTSAL
Trigger: GAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACT...CTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR TCA 90 bp AACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCACAGAGCCTAGAGCAGGATGTCGGTaGTCAGGCCTGGCATTTCGG +
Preference number: 2 (lower is better)
Translates to: NFSPPFTVSTSTCSITEPRAGCR*SGLAFR
Trigger: CCGAAATGCCAGGCCTGATCACCGACATCCTGCTCT...AGGCTCTGTGATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp AACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCACAGAGCCTCTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: NFSPPFTVSTSTCSITEPLCGTC*QGSGAK
Trigger: CTTGGCACCCGACCCTTGGCAGCATGTACCACACAG...AGGCTCTGTGATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp TCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCCAGTCCCATACATATCTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: SFRDRVCTISWRCQSHTYLCGTC*QGSGAK
Trigger: CTTGGCACCCGACCCTTGGCAGCATGTACCACACAG...ATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAATGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCC +
Preference number: 2 (lower is better)
Translates to: EFISWCLQELMEKQHSEQWLCGT*CQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCA...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CCA 90 bp CTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACTCAGCTTGGCTGTGTaGTACATGCTGCCAAGGGTC +
Preference number: 2 (lower is better)
Translates to: LSADHDIVSRLVPEVIAQLSLAV*YMLPRV
Trigger: GACCCTTGGCAGCATGTACCACACAGCCAAGCTGAG...TTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CCA 90 bp GGGCCTCCCTTAACAATGCTGCCTCCGAGGAAGAGCTGTCCTGTGAGGCGGGGTAGCAACAAGCAACAGTaGTCAGTAAATGTATATGAC +
Preference number: 2 (lower is better)
Translates to: GPPLTMLPPRKSCPVRRGSNKQQ*SVNVYD
Trigger: GTCATATACATTTACTGACCACTGTTGCTTGTTGCT...ACCCCGCCTCACAGGACAGCTCTTCCTCGGAGGCAGCATTGTTAAGGGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp ATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGCAACAAGCAACAGTaGTCAGTAAATGTATATGAC +
Preference number: 2 (lower is better)
Translates to: MVELSAQPTKPWAASGLCSNKQQ*SVNVYD
Trigger: GTCATATACATTTACTGACCACTGTTGCTTGTTGCT...GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATTGGCCAGGCAGTGGCTaGTGTGGAGAAAGGCCAGTT +
Preference number: 2 (lower is better)
Translates to: VGVQLQPSFYCVYINLQHWPGSG*CGERPV
Trigger: AACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCA...ATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp CCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCGTCTGCACAATCTCATaGCGCTGCCAGTCCCATACA +
Preference number: 2 (lower is better)
Translates to: PLSADHDIVSRLVPEVIAVCTIS*RCQSHT
Trigger: TGTATGGGACTGGCAGCGCCATGAGATTGTGCAGAC...GGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR TCA 90 bp GCCACCCGTTTTCCCTTGACCACTAGGGGCTCTGGCTGGGACTTTAGTTCCTCGGTCAGTAAATGTATATaGCTCAACACATTGCCACAG +
Preference number: 2 (lower is better)
Translates to: ATRFPLTTRGSGWDFSSSVSKCI*LNTLPQ
Trigger: CTGTGGCAATGTGTTGAGTCATATACATTTACTGAC...CGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR TCA 90 bp CAGGATGTCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTGTCAGTAAATGTATATaGCTCAACACATTGCCACAG +
Preference number: 2 (lower is better)
Translates to: QDVGDQAWHFGQQPALHFVSKCI*LNTLPQ
Trigger: CTGTGGCAATGTGTTGAGTCATATACATTTACTGAC...AAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGACATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp ACAGGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: TGLRVYFLVPPRAHGKAALCGTC*QGSGAK
Trigger: CTTGGCACCCGACCCTTGGCAGCATGTACCACACAG...TGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
3UTR-3UTR GCA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAACTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: QELMEKQHSEQQATVVSKLCGTC*QGSGAK
Trigger: CTTGGCACCCGACCCTTGGCAGCATGTACCACACAG...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR GCA 90 bp GGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGGGTATGACTCAACACATTaGCACAGTCTCAGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: GDEGGVQIQMSELQSPPGYDSTH*HSLSLA
Trigger: AGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATA...CCCTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp TCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCCAGTCCCATACATATGCCACAGTCTCAGCTTaGCTGTGTGGTACATGCTGC +
Preference number: 2 (lower is better)
Translates to: SFRDRVCTISWRCQSHTYATVSA*LCGTCC
Trigger: GCAGCATGTACCACACAGCCAAGCTGAGACTGTGGC...ATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGGCAGTGGCTGGTGTaGAGAAAGGCCAGTTCGCAC +
Preference number: 2 (lower is better)
Translates to: VTSLFLGASKSSWKSSTVRQWLV*RKASSH
Trigger: GTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT...CACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATCCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCC +
Preference number: 2 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHPLARQ*LVWRKA
Trigger: GGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGG...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp AACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCCCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCC +
Preference number: 2 (lower is better)
Translates to: NKQQWSVNVYDSTHCHSLPLARQ*LVWRKA
Trigger: GGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGG...GAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACTCATCACTTCCCCGCTaGCCAGGCAGTGGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYSSLPR*PGSGWC
Trigger: ACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGA...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GGGAGTGTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGTCCCATACATATAAGTaGCTCCCGTACAGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: GSVGDEGGVQIQMSELQSSHTYK*LPYSPA
Trigger: GGCTGGACTGTACGGGAGCCACTTATATGTATGGGA...CGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCACACTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CCA 90 bp AACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCACAGAGCCTACTAGGGGCTCTGGCTaGGACTTTAGTTCCTCGTCC +
Preference number: 2 (lower is better)
Translates to: NFSPPFTVSTSTCSITEPTRGSG*DFSSSS
Trigger: GGACGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGT...AGGCTCTGTGATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCACAACTAGGGGCTCTGGCTaGGACTTTAGTTCCTCGTCC +
Preference number: 2 (lower is better)
Translates to: GFNFSPPFTVSTSTCSITTRGSG*DFSSSS
Trigger: GGACGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGT...TGTGATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR CAA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGA +
Preference number: 2 (lower is better)
Translates to: WSVNVYDSTHCHSLS*AVWYMLPRVGCQER
Trigger: TCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CCA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACTCAGCTTGGCTGTGTaGTACATGCTGCCAAGGGTC +
Preference number: 2 (lower is better)
Translates to: EFISWCLQELMEKQHSEQLSLAV*YMLPRV
Trigger: GACCCTTGGCAGCATGTACCACACAGCCAAGCTGAG...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CCA 90 bp GAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTGCCACAGTCTCAGCTTaGCTGTGTGGTACATGCTGC +
Preference number: 2 (lower is better)
Translates to: ELMEKQHSEQQATVVSKCATVSA*LCGTCC
Trigger: GCAGCATGTACCACACAGCCAAGCTGAGACTGTGGC...ACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CCA 90 bp GTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCATCCCATACATATAAGTaGCTCCCGTACAGTCCTTTG +
Preference number: 2 (lower is better)
Translates to: VGDEGGVQIQMSELQSPPSHTYK*LPYSPL
Trigger: CAAAGGACTGTACGGGAGCCACTTATATGTATGGGA...TGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455397.5
3UTR-3UTR CCA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCCACAGTCTCAGCTTaGCTGTGTGGTACATGCTGC +
Preference number: 2 (lower is better)
Translates to: FISWCLQELMEKQHSEQQATVSA*LCGTCC
Trigger: GCAGCATGTACCACACAGCCAAGCTGAGACTGTGGC...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CCA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAAAGTCCACCAGGAAGTTaGGGTTCAACTTCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: QELMEKQHSEQQATVVSKSPPGS*GSTSAL
Trigger: GAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACT...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR TCA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGTGTACAGCGACGTGGTaGTGTAGAGGCGCTTCCCAT +
Preference number: 2 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLCTATW*CRGASH
Trigger: ATGGGAAGCGCCTCTACATCACCACGTCGCTGTACA...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp GATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAGTAGAGGAAGCGAGCAACAAGCAACAGTaGTCAGTAAATGTATATGAC +
Preference number: 2 (lower is better)
Translates to: DVILPQVPMQPVAEVEEASNKQQ*SVNVYD
Trigger: GTCATATACATTTACTGACCACTGTTGCTTGTTGCT...CGCTTCCTCTACTTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp TTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGAGCAACAAGCAACAGTaGTCAGTAAATGTATATGAC +
Preference number: 2 (lower is better)
Translates to: FKSRCQSYNRPQGSGAHGSNKQQ*SVNVYD
Trigger: GTCATATACATTTACTGACCACTGTTGCTTGTTGCT...CCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR TCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTCAGTAAATGTATATaGCTCAACACATTGCCACAG +
Preference number: 2 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSVSKCI*LNTLPQ
Trigger: CTGTGGCAATGTGTTGAGTCATATACATTTACTGAC...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR TCA 90 bp GGGAGTGTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGGTCAGTAAATGTATATaGCTCAACACATTGCCACAG +
Preference number: 2 (lower is better)
Translates to: GSVGDEGGVQIQMSELQSVSKCI*LNTLPQ
Trigger: CTGTGGCAATGTGTTGAGTCATATACATTTACTGAC...CGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCACACTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR GCA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGTCAGAGATGTCATACTaGCTCAGGTCCCCATGCAGC +
Preference number: 2 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLSEMSY*LRSPCS
Trigger: GCTGCATGGGGACCTGAGGCAGTATGACATCTCTGA...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATGCCACAGTCTCAGCTTaGCTGTGTGGTACATGCTGC +
Preference number: 2 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHATVSA*LCGTCC
Trigger: GCAGCATGTACCACACAGCCAAGCTGAGACTGTGGC...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR GCA 90 bp GAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTTATGACTCAACACATTaGCACAGTCTCAGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: ELMEKQHSEQQATVVSKCYDSTH*HSLSLA
Trigger: AGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATA...ACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR GCA 90 bp GTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGTATGACTCAACACATTaGCACAGTCTCAGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: VTSLFLGASKSSWKSSTVYDSTH*HSLSLA
Trigger: AGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATA...CACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR GCA 90 bp GGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCACAGAGTTTATTTCTTGGTaGCTCCAAGAGCTCATGGAA +
Preference number: 2 (lower is better)
Translates to: GFNFSPPFTVSTSTCSITEFISW*LQELME
Trigger: TTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC...TGTGATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR TCA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAGTCAGTAAATGTATATaGCTCAACACATTGCCACAG +
Preference number: 2 (lower is better)
Translates to: ISWCLQELMEKQHSEQQAVSKCI*LNTLPQ
Trigger: CTGTGGCAATGTGTTGAGTCATATACATTTACTGAC...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CCA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATACGAGTTTATTTCTTaGTGCCTCCAAGAGCTCATG +
Preference number: 2 (lower is better)
Translates to: QELMEKQHSEQQATVVSKYEFIS*CLQELM
Trigger: CATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTA...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR GCA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGTATGACTCAACACATTaGCACAGTCTCAGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLYDSTH*HSLSLA
Trigger: AGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATA...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CCA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGAGCAACAAGCAACAGTaGTCAGTAAATGTATATGAC +
Preference number: 2 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQSNKQQ*SVNVYD
Trigger: GTCATATACATTTACTGACCACTGTTGCTTGTTGCT...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CCA 90 bp ACAGGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCAAGCAACAAGCAACAGTaGTCAGTAAATGTATATGAC +
Preference number: 2 (lower is better)
Translates to: TGLRVYFLVPPRAHGKAASNKQQ*SVNVYD
Trigger: GTCATATACATTTACTGACCACTGTTGCTTGTTGCT...TGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
3UTR-3UTR CCA 90 bp GTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTaGTCAGTAAATGTATATGAC +
Preference number: 2 (lower is better)
Translates to: VTSLFLGASKSSWKSSTVSNKQQ*SVNVYD
Trigger: GTCATATACATTTACTGACCACTGTTGCTTGTTGCT...CACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CAA 90 bp GCTGAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGC +
Preference number: 3 (lower is better)
Translates to: AECAAHKALGSVWVVQEAKASSH*AWMSLG
Trigger: GCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTT...CGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR CCA 72 bp TGGATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTaGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCC +
Preference number: 3 (lower is better)
Translates to: WMVELSAQPTKP*AASGLCRKRIS
Trigger: GGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp ATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGC +
Preference number: 3 (lower is better)
Translates to: MVELSAQPTKPWAASGLCKASSH*AWMSLG
Trigger: GCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTT...GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp CAGGATGTCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTTGGGCAGCGTCTGGGTaGTGCAGGAAGCGGATCTCC +
Preference number: 3 (lower is better)
Translates to: QDVGDQAWHFGQQPALHFWAASG*CRKRIS
Trigger: GGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCA...AAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGACATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR TCA 72 bp CTCCCTCGTTCTTGTAGAAGCGCTGGATGGTGGAGCTaGGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTG +
Preference number: 3 (lower is better)
Translates to: LPRSCRSAGWWS*VRSPQSLGQRL
Trigger: CAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAACGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR TCA 72 bp CTCCAGCATGCCTCAGGTCCCCATGCAGCCAGTTGCTaGAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGA +
Preference number: 3 (lower is better)
Translates to: LQHASGPHAASC*SRGSGRPGRAG
Trigger: TCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCATGGGGACCTGAGGCATGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427977.6
3UTR GCA 72 bp GTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTaGAGCACCCCCAGGTCTCTCCCATGTCCCCTTCAC +
Preference number: 3 (lower is better)
Translates to: VSRLVPEVIAQR*STPRSLPCPLH
Trigger: GTGAAGGGGACATGGGAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
3UTR CCA 72 bp AGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCCAGTTCGCACTTGGCA +
Preference number: 3 (lower is better)
Translates to: RELIITSPLARQ*LVWRKASSHLA
Trigger: TGCCAAGTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
3UTR-3UTR CAA 90 bp TGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCTGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTG +
Preference number: 3 (lower is better)
Translates to: CAAHKALGSVWVVQEADLCHSLS*AVWYML
Trigger: CAGCATGTACCACACAGCCAAGCTGAGACTGTGGCA...GAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp CAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGGGCTGGGCCAATCCACATCAGCGGGGTaGAAGCCATCTCGTAAGACA +
Preference number: 3 (lower is better)
Translates to: QSYNRPQGSGAHGQGLGQSTSAG*KPSRKT
Trigger: TGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA...TTGGCCCAGCCCTTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CAA 90 bp GCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGTTGGCATGGATGTCCTaGGGCTCAATGACCTTGTGC +
Preference number: 3 (lower is better)
Translates to: ALDVSQGADHHFPAGQAVLAWMS*GSMTLC
Trigger: GCACAAGGTCATTGAGCCCAAGGACATCCATGCCAA...CACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455839.5
3UTR TCA 72 bp GGCTCCCGTACAGTCCAGCCTCCACATCAGCGGGGTTaGAGCCATCTCGTAAGACATTGGGAGCTGCCCACT +
Preference number: 3 (lower is better)
Translates to: GSRTVQPPHQRG*SHLVRHWELPT
Trigger: AGTGGGCAGCTCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTACGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR GCA 72 bp GCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTaGAGGAAGCGGATCTCCAAGGGAATAAGCCCATCT +
Preference number: 3 (lower is better)
Translates to: AQPTKPWAASGL*RKRISKGISPS
Trigger: AGATGGGCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR GCA 72 bp CTCGTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTaGGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTT +
Preference number: 3 (lower is better)
Translates to: LVLVEALDGGAE*AAHKALGSVWV
Trigger: AACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR CCA 72 bp GCTGAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTaGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAG +
Preference number: 3 (lower is better)
Translates to: AECAAHKALGSV*VVQEADLQGNK
Trigger: CTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR CCA 72 bp TCCGAGGAAGAGCTGTCCTGTGAGGCGGGGTCTCTGTaGGTCAGAGATGTCATACTGCCTCAGGTCCCCATG +
Preference number: 3 (lower is better)
Translates to: SEEELSCEAGSL*VRDVILPQVPM
Trigger: CATGGGGACCTGAGGCAGTATGACATCTCTGACCCACAGAGACCCCGCCTCACAGGACAGCTCTTCCTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp AGGGGCTCCTTCCCGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTAAACCCCCTTTGCCATaGCCCTTGACGTCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: RGSFPKSTRKLGFNFSPPKPPLP*PLTSPR
Trigger: CCTGGGAGACGTCAAGGGCAATGGCAAAGGGGGTTT...AGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CAA 90 bp CAGGTCCCCATGCAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGTCCACATCAGCGGGGTaGAAGCCATCTCGTAAGACA +
Preference number: 3 (lower is better)
Translates to: QVPMQPVAEVEEAVVQGESTSAG*KPSRKT
Trigger: TGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA...CTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCATGGGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CAA 90 bp GCTCCTTCCCGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTATGGGCAGCGTCTGGGTaGTGCAGGAAGCGGATCTCC +
Preference number: 3 (lower is better)
Translates to: APSRSPPGSWGSTSALLLWAASG*CRKRIS
Trigger: GGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCA...TAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp GTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGCCACCCGTTTTCCCTaGACCACTAGGGGCTCTGGC +
Preference number: 3 (lower is better)
Translates to: VGDEGGVQIQMSELQSPPATRFP*TTRGSG
Trigger: GCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC...TGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp GACATTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACTGGGCAGCACCAGCTaGGTGCGCGACTTGGTGCTA +
Preference number: 3 (lower is better)
Translates to: DIGSCPLSADHDIVSRLVLGSTS*VRDLVL
Trigger: TAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCAG...TACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455839.5
3UTR-3UTR CAA 90 bp TTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGTTGGGCTCAATGACCTaGTGCAGCTTTGGGGCCCGG +
Preference number: 3 (lower is better)
Translates to: LGAAHSVLIMTLCRGWYQLGSMT*CSFGAR
Trigger: CCGGGCCCCAAAGCTGCACAAGGTCATTGAGCCCAA...CTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455839.5
3UTR TCA 72 bp TGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTaGAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGA +
Preference number: 3 (lower is better)
Translates to: CHTASGPHAASC*SRGSGRPGRAG
Trigger: TCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp CAGGATGTCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTAGCACAAAACCCCCTTaGCCATTGCCCTTGACGTCT +
Preference number: 3 (lower is better)
Translates to: QDVGDQAWHFGQQPALHFSTKPP*PLPLTS
Trigger: AGACGTCAAGGGCAATGGCAAAGGGGGTTTTGTGCT...AAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGACATCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CAA 90 bp AGAGATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAGTAGAGGAATGGGCAGCGTCTGGGTaGTGCAGGAAGCGGATCTCC +
Preference number: 3 (lower is better)
Translates to: RDVILPQVPMQPVAEVEEWAASG*CRKRIS
Trigger: GGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCA...TTCCTCTACTTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
3UTR CCA 72 bp ACAATCTCATGGCGCTGCCAGTCCCATACATATAAGTaGCTCCCGTACAGTCCAGCCTCCACATCAGCGGGG +
Preference number: 3 (lower is better)
Translates to: TISWRCQSHTYK*LPYSPASTSAG
Trigger: CCCCGCTGATGTGGAGGCTGGACTGTACGGGAGCCACTTATATGTATGGGACTGGCAGCGCCATGAGATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CAA 90 bp CCGTACAGTCCAGCCTCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGTGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTG +
Preference number: 3 (lower is better)
Translates to: PYSPASTSAGLKPSRKTLCHSLS*AVWYML
Trigger: CAGCATGTACCACACAGCCAAGCTGAGACTGTGGCA...CAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CAA 90 bp ACATTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGC +
Preference number: 3 (lower is better)
Translates to: TLGAAHSVLIMTLCRGWYKASSH*AWMSLG
Trigger: GCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTT...GTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
3UTR-3UTR CAA 90 bp GCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCAAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGC +
Preference number: 3 (lower is better)
Translates to: AAHSVLIMTLCRGWYQKSKASSH*AWMSLG
Trigger: GCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTT...TGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
3UTR-3UTR CAA 90 bp ACATTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACAAACCCCCTTTGCCATaGCCCTTGACGTCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: TLGAAHSVLIMTLCRGWYKPPLP*PLTSPR
Trigger: CCTGGGAGACGTCAAGGGCAATGGCAAAGGGGGTTT...GTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CAA 90 bp GTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGGTGCTGATCATGACATaGTGTCGAGGCTGGTACCAG +
Preference number: 3 (lower is better)
Translates to: VLVEALDGGAECAAHKALVLIMT*CRGWYQ
Trigger: CTGGTACCAGCCTCGACACAATGTCATGATCAGCAC...CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR GCA 72 bp CACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAAT +
Preference number: 3 (lower is better)
Translates to: HIATVSAWLCGT*CQGSGAKREQN
Trigger: ATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCTGAGACTGTGGCAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR CCA 72 bp GGCCAAGGGGCTCCTTCCCGAAGTCCACCAGGAAGTTaGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTA +
Preference number: 3 (lower is better)
Translates to: GQGAPSRSPPGS*GSTSALLLLCL
Trigger: TAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGCCCCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp CATCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCCAGTCCCATACATCCTTTGCCATTGCCCTaGACGTCTCCCAGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: HLLETGSAQSHGAASPIHPLPLP*TSPREL
Trigger: CAGCTCCCTGGGAGACGTCAAGGGCAATGGCAAAGG...ATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp CTGTGGGTCAGAGATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAAGCACAAAACCCCCTTaGCCATTGCCCTTGACGTCT +
Preference number: 3 (lower is better)
Translates to: LWVRDVILPQVPMQPVAESTKPP*PLPLTS
Trigger: AGACGTCAAGGGCAATGGCAAAGGGGGTTTTGTGCT...TTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATCTCTGACCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000443708.5
3UTR GCA 72 bp ATTGCCACAGTCTCAGCTTGGCTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAA +
Preference number: 3 (lower is better)
Translates to: IATVSAWLCGTC*QGSGAKREQNE
Trigger: TTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCTGAGACTGTGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CAA 90 bp CCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCTCTGTCTCTTTGCCATaGCCCTTGACGTCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: PLSADHDIVSRLVPEVIASVSLP*PLTSPR
Trigger: CCTGGGAGACGTCAAGGGCAATGGCAAAGAGACAGA...GGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455839.5
3UTR CCA 72 bp ATGTATATGACTCAACACATTGCCACAGTCTCAGCTTaGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCC +
Preference number: 3 (lower is better)
Translates to: MYMTQHIATVSA*LCGTCCQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR CCA 72 bp AGCCCATCTTTTAGAGACAGGGTCTGCACAATCTCATaGCGCTGCCAGTCCCATACATATAAGTGGCTCCCG +
Preference number: 3 (lower is better)
Translates to: SPSFRDRVCTIS*RCQSHTYKWLP
Trigger: CGGGAGCCACTTATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR CCA 72 bp ACAATCTCATGGCGCTGCCAGTCCCATACATATAAGTaGCTCCCGTACAGTCCTTTGCCATTGCCCTTGACG +
Preference number: 3 (lower is better)
Translates to: TISWRCQSHTYK*LPYSPLPLPLT
Trigger: CGTCAAGGGCAATGGCAAAGGACTGTACGGGAGCCACTTATATGTATGGGACTGGCAGCGCCATGAGATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455397.5
3UTR-3UTR CAA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAACCTTTGCCATTGCCCTaGACGTCTCCCAGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: QELMEKQHSEQQATVVSKPLPLP*TSPREL
Trigger: CAGCTCCCTGGGAGACGTCAAGGGCAATGGCAAAGG...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp GTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGCCTTTGCCATTGCCCTaGACGTCTCCCAGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: VTSLFLGASKSSWKSSTVPLPLP*TSPREL
Trigger: CAGCTCCCTGGGAGACGTCAAGGGCAATGGCAAAGG...CACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp AGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGGTGCTGATCATGACATaGTGTCGAGGCTGGTACCAG +
Preference number: 3 (lower is better)
Translates to: SADHDIVSRLVPEVIAQRVLIMT*CRGWYQ
Trigger: CTGGTACCAGCCTCGACACAATGTCATGATCAGCAC...CCGTTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
3UTR-3UTR CAA 90 bp AGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTG +
Preference number: 3 (lower is better)
Translates to: SWGSTSALLLLCLHQPAACHSLS*AVWYML
Trigger: CAGCATGTACCACACAGCCAAGCTGAGACTGTGGCA...TGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGTTACGAGTTTATTTCTaGGTGCCTCCAAGAGCTCAT +
Preference number: 3 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMLRVYF*VPPRAH
Trigger: ATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAA...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CAA 90 bp TCCCTCGTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTGCGCAGCCCACAAATTACGAGTTTATTTCTaGGTGCCTCCAAGAGCTCAT +
Preference number: 3 (lower is better)
Translates to: SLVLVEALDGGAECAAHKLRVYF*VPPRAH
Trigger: ATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAA...TTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAACGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp AAGGGAATAAGCCCATCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCAGCACAAAACCCCCTTaGCCATTGCCCTTGACGTCT +
Preference number: 3 (lower is better)
Translates to: KGISPSFRDRVCTISWRCSTKPP*PLPLTS
Trigger: AGACGTCAAGGGCAATGGCAAAGGGGGTTTTGTGCT...GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCTTATTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR-3UTR CAA 90 bp GGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCACACTCCCGTACAGTCCTTaGCCATTGCCCTTGACGTCT +
Preference number: 3 (lower is better)
Translates to: GFNFSPPFTVSTSTCSITLPYSP*PLPLTS
Trigger: AGACGTCAAGGGCAATGGCAAAGGACTGTACGGGAG...TGTGATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455397.5
3UTR-3UTR CAA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAATGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTG +
Preference number: 3 (lower is better)
Translates to: EFISWCLQELMEKQHSEQCHSLS*AVWYML
Trigger: CAGCATGTACCACACAGCCAAGCTGAGACTGTGGCA...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CAA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGC +
Preference number: 3 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYKASSH*AWMSLG
Trigger: GCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTT...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR GCA 72 bp TCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTaGCAGTCCCATACATATAAGTGGCTCCCGTACAGT +
Preference number: 3 (lower is better)
Translates to: SFRDRVCTISWR*QSHTYKWLPYS
Trigger: ACTGTACGGGAGCCACTTATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAATGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTG +
Preference number: 3 (lower is better)
Translates to: FISWCLQELMEKQHSEQQCHSLS*AVWYML
Trigger: CAGCATGTACCACACAGCCAAGCTGAGACTGTGGCA...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR-3UTR CAA 90 bp AACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCCCTTTGCCATTGCCCTaGACGTCTCCCAGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: NKQQWSVNVYDSTHCHSLPLPLP*TSPREL
Trigger: CAGCTCCCTGGGAGACGTCAAGGGCAATGGCAAAGG...GAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAATACAGTCCTTTGCCATaGCCCTTGACGTCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: FISWCLQELMEKQHSEQQYSPLP*PLTSPR
Trigger: CCTGGGAGACGTCAAGGGCAATGGCAAAGGACTGTA...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455397.5
3UTR GCA 72 bp TCCAAGGGAATAAGCCCATCTTTTAGAGACAGGGTCTaGACAATCTCATGGCGCTGCCAGTCCCATACATAT +
Preference number: 3 (lower is better)
Translates to: SKGISPSFRDRV*TISWRCQSHTY
Trigger: ATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCTTATTCCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR-3UTR CAA 90 bp GGGAGTGTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGTTACGAGTTTATTTCTaGGTGCCTCCAAGAGCTCAT +
Preference number: 3 (lower is better)
Translates to: GSVGDEGGVQIQMSELQSLRVYF*VPPRAH
Trigger: ATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAA...CGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCACACTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443708.5
ENST00000455397.5
3UTR CCA 72 bp GTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATaGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGG +
Preference number: 3 (lower is better)
Translates to: VTSLFLGASKSS*KSSTVSNKQQW
Trigger: CCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
3UTR CCA 72 bp TCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTaGTCAGTAAATGTATATGACTCAACACATTGCCAC +
Preference number: 3 (lower is better)
Translates to: SWKSSTVSNKQQ*SVNVYDSTHCH
Trigger: GTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp ATGCTGCCTCCGAGGAAGAGCTGTCCTGTGAGGCGGGGTCTCTGTGGGTCAGAGAGCGGGCCACGGCAGTaGGGCTGGCCTAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: MLPPRKSCPVRRGLCGSESGPRQ*GWPRSP
Trigger: TGGGGACCTAGGCCAGCCGCACTGCCGTGGCCCGCT...CTCTGACCCACAGAGACCCCGCCTCACAGGACAGCTCTTCCTCGGAGGCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423070.5
CDS-3UTR CCA 90 bp GAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATGGCTGGGCCACGCTCTaGAGGGTGAAGGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ECAAHKALGSVWVVQEADGWATL*RVKAPS
Trigger: GGAGGGAGCCTTCACCCTCCAGAGCGTGGCCCAGCC...ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423070.5
CDS-3UTR TCA 90 bp AGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCGCTGGATGGTGGAGCTaGGTGCGCAGCCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: SAQPTKPWAASGLCRKRIAGWWS*VRSPQS
Trigger: GCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGC...GATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GGGCCTCCCTTAACAATGCTGCCTCCGAGGAAGAGCTGTCCTGTGAGGCGGGGTCTGAGCTGGATCATCTaGGGGCCTCCAGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: GPPLTMLPPRKSCPVRRGLSWII*GPPATR
Trigger: ACGGGTGGCTGGAGGCCCTCAGATGATCCAGCTCAG...ACCCCGCCTCACAGGACAGCTCTTCCTCGGAGGCAGCATTGTTAAGGGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGGGCATGGGCAGCCGGTaGATGACCTGGCAATACTGG +
Preference number: 4 (lower is better)
Translates to: ALDVSQGADHHFPAGQAVGMGSR*MTWQYW
Trigger: CCAGTATTGCCAGGTCATCCACCGGCTGCCCATGCC...CACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGGGCTGGGCTCGTCCTTCAGGTTaGGCATGGGCAGCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: DVRATIAPRVAELMGKGWARPSG*AWAAGG
Trigger: TCCACCGGCTGCCCATGCCCAACCTGAAGGACGAGC...CCAGCCCTTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GCCATTGCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCTCGTCCTTCAGGTTaGGCATGGGCAGCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: AIALDVSQGADHHFPAGQARPSG*AWAAGG
Trigger: TCCACCGGCTGCCCATGCCCAACCTGAAGGACGAGC...CTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGCAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
CDS-3UTR CCA 90 bp GTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTTGCCTTGTGCAGCTTTaGGGCCCGGGGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VEAGTRSHSPTVQHPQVSCLVQL*GPGLRA
Trigger: GGCTCTGAGCCCCGGGCCCCAAAGCTGCACAAGGCA...AGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp GTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGGCTGGTGTGGGCATGGGCAGCCGGTaGATGACCTTTCATGGCCTC +
Preference number: 4 (lower is better)
Translates to: VSQGADHHFPAGQAVAGVGMGSR*MTFHGL
Trigger: GAGGCCATGAAAGGTCATCCACCGGCTGCCCATGCC...CACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR TCA 90 bp GCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGCCGACTGGTACACTTTaGTCCCGGCGGGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ALDVSQGADHHFPAGQAVPTGTL*SRRVCC
Trigger: ACAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGG...CACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
CDS-3UTR TCA 90 bp GCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCCCGACTGGTACACTTTaGTCCCGGCGGGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: AQPTKPWAASGLCRKRISPTGTL*SRRVCC
Trigger: ACAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGG...GGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTCGTCTCCCAGGGAGCTaGTCATCACTTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: VEAGTRSHSPTVQHPQVSRLPGS*SSLPRW
Trigger: CCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACG...AGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR TCA 90 bp TCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTCTTGGGGGCTGGATGGTGGAGCTaGGTGCGCAGCCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: SVIRPGISGSSQPFTFLGAGWWS*VRSPQS
Trigger: GCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGC...CCCCAAGAAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp CAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGGGCTGGGCCAAAGAGCAGGATGTCGGTaGTCAGGCCTGGCATTTCGG +
Preference number: 4 (lower is better)
Translates to: QSYNRPQGSGAHGQGLGQRAGCR*SGLAFR
Trigger: CCGAAATGCCAGGCCTGATCACCGACATCCTGCTCT...TTGGCCCAGCCCTTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp AGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCCCACCCGTTTTCCCTTaGCCACTAGGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SAQPTKPWAASGLCRKRIPPVFP*PLGALA
Trigger: AGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGG...GATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GCCACCCGTTTTCCCTTGACCACTAGGGGCTCTGGCTGGGACTTTAGTTCCTCGCCACGCTCTGGAGGGTaGAGGCTCCCTCCGCACGTT +
Preference number: 4 (lower is better)
Translates to: ATRFPLTTRGSGWDFSSSPRSGG*RLPPHV
Trigger: AACGTGCGGAGGGAGCCTTCACCCTCCAGAGCGTGG...CGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423070.5
CDS-3UTR GCA 90 bp CAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATGTCGGTCCGGCGGGTTTGCTGTaGTGGTGTCAGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QPVAEVEEAVVQGEQDVGPAGLL*WCQRPL
Trigger: CAGCGGCCTCTGACACCAGCACAGCAAACCCGCCGG...ACCGACATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427977.6
ENST00000443708.5
CDS-3UTR GCA 90 bp GCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGTGGTGCGCGACTTGGTaGTATCACCGAAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ALDVSQGADHHFPAGQAVWCATW*YHRSSC
Trigger: GCAGCTGCTTCGGTGATAGCACCAAGTCGCGCACCA...CACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
CDS-3UTR GCA 90 bp GTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGGCTGGTGTGTGGTGCGCGACTTGGTaGTATCACCGAAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSQGADHHFPAGQAVAGVWCATW*YHRSSC
Trigger: GCAGCTGCTTCGGTGATAGCACCAAGTCGCGCACCA...CACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
CDS-3UTR GCA 90 bp AGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCGTCATAGCCCAACGGTaGAGCACCCCCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SAQPTKPWAASGLCRKRIVIAQR*STPRSL
Trigger: GAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGAC...GATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR GCA 90 bp GTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTTCCCTCCGCACGTTCTaGAGCACACATCCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: VEAGTRSHSPTVQHPQVSSLRTF*STHPSG
Trigger: CCCGCTGGGATGTGTGCTGCAGAACGTGCGGAGGGA...AGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423070.5
CDS-3UTR CCA 90 bp GAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTCCCGCGGGTTTGCTGTGCTaGTGTCAGAGGCCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: EAGTRSHSPTVQHPQVSPAGLLC*CQRPLF
Trigger: GAACAGCGGCCTCTGACACCAGCACAGCAAACCCGC...GGGAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CCA 90 bp GGGCCTCCCTTAACAATGCTGCCTCCGAGGAAGAGCTGTCCTGTGAGGCGGGGTCCCTGGGTCCTTTCATaGCCTCCAGAGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: GPPLTMLPPRKSCPVRRGPWVLS*PPEGWS
Trigger: ACTCCACCCCTCTGGAGGCCATGAAAGGACCCAGGG...ACCCCGCCTCACAGGACAGCTCTTCCTCGGAGGCAGCATTGTTAAGGGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGGGCTGGGCCAAGCTTGGTGCGCGACTTaGTGCTATCACCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QSYNRPQGSGAHGQGLGQAWCAT*CYHRSS
Trigger: GCTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGC...TTGGCCCAGCCCTTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp AGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCGCCTTGGGCAGCGTCTaGGTTGTGCAGGAAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SAQPTKPWAASGLCRKRIALGSV*VVQEAD
Trigger: ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC...GATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GCCATTGCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGCAGCCCACAAAGCCTTaGGCAGCGTCTGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: AIALDVSQGADHHFPAGQQPTKP*AASGLC
Trigger: GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTG...CTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGCAATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCACAGCCCACAAAGCCTTaGGCAGCGTCTGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: RSPQSLGQRLGCAGSGSPQPTKP*AASGLC
Trigger: GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTG...TGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATGTCGGTTGCCTTGTGCAGCTTTaGGGCCCGGGGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QPVAEVEEAVVQGEQDVGCLVQL*GPGLRA
Trigger: GGCTCTGAGCCCCGGGCCCCAAAGCTGCACAAGGCA...ACCGACATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR CAA 72 bp CTGGATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTaGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTC +
Preference number: 4 (lower is better)
Translates to: LDGGAECAAHKA*GSVWVVQEADL
Trigger: GAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGGCTGGTGTGGTGTTCCATCCTGAGTaGTGCAGCTCGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VSQGADHHFPAGQAVAGVVFHPE*CSSSFR
Trigger: CCTGAAGGACGAGCTGCATCACTCAGGATGGAACAC...CACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
CDS-3UTR TCA 90 bp CAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGGGCTGGGCCAAGCAGGTGTTCCATCCTaGGTGATGCAGCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: QSYNRPQGSGAHGQGLGQAGVPS*VMQLVL
Trigger: AAGGACGAGCTGCATCACTCAGGATGGAACACCTGC...TTGGCCCAGCCCTTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp AGCTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAACCACGCTCTGGAGGGTaGAGGCTCCCTCCGCACGTT +
Preference number: 4 (lower is better)
Translates to: SLAVWYMLPRVGCQERAEPRSGG*RLPPHV
Trigger: AACGTGCGGAGGGAGCCTTCACCCTCCAGAGCGTGG...TTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS-3UTR GCA 90 bp GCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGCACCGAAGCAGCTGCTaGAGGTGTTCCATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: ALDVSQGADHHFPAGQAVHRSSC*RCSILS
Trigger: ACTCAGGATGGAACACCTGCAGCAGCTGCTTCGGTG...CACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
CDS-3UTR GCA 90 bp GCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGGATGGTGGAGCTGAGTaGGCAGCCCACAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: AHKALGSVWVVQEADLQGDGGAE*AAHKAL
Trigger: CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATC...CCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp ATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCCTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: MVELSAQPTKPWAASGLCLCGTC*QGSGAK
Trigger: CTTGGCACCCGACCCTTGGCAGCATGTACCACACAG...GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTCCCCTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: EAGTRSHSPTVQHPQVSPLCGTC*QGSGAK
Trigger: CTTGGCACCCGACCCTTGGCAGCATGTACCACACAG...GGGAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp CTTTGGGGCCCGGGGCTCAGAGCCCACGTCCACCACATAGATGCGAGAGGAGATGCTTGGTGCGCGACTTaGTGCTATCACCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LWGPGLRAHVHHIDARGDAWCAT*CYHRSS
Trigger: GCTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGC...ATCTCCTCTCGCATCTATGTGGTGGACGTGGGCTCTGAGCCCCGGGCCCCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR CCA 90 bp GGGCCTCCCTTAACAATGCTGCCTCCGAGGAAGAGCTGTCCTGTGAGGCGGGGTTGGGCAGCACCAGCTTaGTGCGCGACTTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: GPPLTMLPPRKSCPVRRGWAAPA*CATWCY
Trigger: ATAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCA...ACCCCGCCTCACAGGACAGCTCTTCCTCGGAGGCAGCATTGTTAAGGGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATTGGCCAGGCAGTGGCTaGTGTGGAGAAAGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: ECAAHKALGSVWVVQEADWPGSG*CGERPV
Trigger: AACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCA...ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGCCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKPLARQ*LVWRKA
Trigger: GGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGG...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGCCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMPLARQ*LVWRKA
Trigger: GGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGG...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAGTCGGTGATCAGGCCTaGCATTTCGGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PTKPWAASGLCRKRISKGVGDQA*HFGQQP
Trigger: TGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGAC...TCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTCTTGGGGGTCGGTGATCAGGCCTaGCATTTCGGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SVIRPGISGSSQPFTFLGVGDQA*HFGQQP
Trigger: TGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGAC...CCCCAAGAAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGGGCTGGGCCAAGAGGCGGGGTCTCTGTaGGTCAGAGATGTCATACTG +
Preference number: 4 (lower is better)
Translates to: QSYNRPQGSGAHGQGLGQEAGSL*VRDVIL
Trigger: CAGTATGACATCTCTGACCCACAGAGACCCCGCCTC...TTGGCCCAGCCCTTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp ACCCCCTTTGCCATTGCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCAGCAATGGGGCGCATTaGCTGGGCCACGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: TPFAIALDVSQGADHHFPSNGAH*LGHALE
Trigger: CTCCAGAGCGTGGCCCAGCCAATGCGCCCCATTGCT...GGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGCAATGGCAAAGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423070.5
CDS-3UTR CCA 90 bp AAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAGCTGCCTTGTGCAGCTTTaGGGCCCGGGGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KPWAASGLCRKRISKGISCLVQL*GPGLRA
Trigger: GGCTCTGAGCCCCGGGCCCCAAAGCTGCACAAGGCA...GCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGGCTGGTGTGGTGGATGACCTTTCATaGCCTCCAGAGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VSQGADHHFPAGQAVAGVVDDLS*PPEGWS
Trigger: ACTCCACCCCTCTGGAGGCCATGAAAGGTCATCCAC...CACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR TCA 90 bp GAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTCCCGTGTTCCATCCTGAGTaGTGCAGCTCGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: EAGTRSHSPTVQHPQVSPVFHPE*CSSSFR
Trigger: CCTGAAGGACGAGCTGCATCACTCAGGATGGAACAC...GGGAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR TCA 90 bp GGCCCGGGGCTCAGAGCCCACGTCCACCACATAGATGCGAGAGGAGATGAGACTGCAGGTGTTCCATCCTaGGTGATGCAGCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: GPGLRAHVHHIDARGDETAGVPS*VMQLVL
Trigger: AAGGACGAGCTGCATCACTCAGGATGGAACACCTGC...AGTCTCATCTCCTCTCGCATCTATGTGGTGGACGTGGGCTCTGAGCCCCGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR TCA 90 bp AAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAGCCGTCTCCCAGGGAGCTaGTCATCACTTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: KPWAASGLCRKRISKGISRLPGS*SSLPRW
Trigger: CCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACG...GCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGGCTGGTGTGCCACATCAGCGGGGTTaGAGCCATCTCGTAAGACAT +
Preference number: 4 (lower is better)
Translates to: VSQGADHHFPAGQAVAGVPHQRG*SHLVRH
Trigger: ATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGG...CACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR GCA 90 bp TGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAACCGGCGGGTTTGCTGTaGTGGTGTCAGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: WLCGTCCQGSGAKREQNEPAGLL*WCQRPL
Trigger: CAGCGGCCTCTGACACCAGCACAGCAAACCCGCCGG...TTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
CDS-3UTR GCA 90 bp GGCCAGTTCGCACTTGGCATGGATGTCCTTGGGCTCAATGACCTTGTGCAGCTTCCGGCGGGTTTGCTGTaGTGGTGTCAGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GQFALGMDVLGLNDLVQLPAGLL*WCQRPL
Trigger: CAGCGGCCTCTGACACCAGCACAGCAAACCCGCCGG...AAGCTGCACAAGGTCATTGAGCCCAAGGACATCCATGCCAAGTGCGAACTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR GCA 90 bp GCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGTATCACCGAAGCAGCTaGTGCAGGTGTTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: ALDVSQGADHHFPAGQAVYHRSS*CRCSIL
Trigger: CAGGATGGAACACCTGCAGCAGCTGCTTCGGTGATA...CACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
CDS-3UTR GCA 90 bp AGCTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAAGGCTCAATGACCTTGTaGAGCTTTGGGGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SLAVWYMLPRVGCQERAEGSMTL*SFGARG
Trigger: GCCCCGGGCCCCAAAGCTGCACAAGGTCATTGAGCC...TTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368868.10
ENST00000426705.6
CDS-3UTR GCA 90 bp ACCCCCTTTGCCATTGCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGTCATAGCCCAACGGTaGAGCACCCCCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TPFAIALDVSQGADHHFPVIAQR*STPRSL
Trigger: GAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGAC...GGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGCAATGGCAAAGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR GCA 90 bp TCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTCTTGGGGGATGGTGGAGCTGAGTaGGCAGCCCACAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SVIRPGISGSSQPFTFLGDGGAE*AAHKAL
Trigger: CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATC...CCCCAAGAAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp AGGGGCTCCTTCCCGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RGSFPKSTRKLGFNFSPPWLCGT*CQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCA...AGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGGCTGGTGTGTTGGGCTCAATGACATaGCTTGTGCAGCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: VSQGADHHFPAGQAVAGVLGSMT*LVQLWG
Trigger: GCCCCAAAGCTGCACAAGGCATGTCATTGAGCCCAA...CACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CAGGATGTCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTGCGGGTTTGCTGTGCTaGTGTCAGAGGCCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QDVGDQAWHFGQQPALHFAGLLC*CQRPLF
Trigger: GAACAGCGGCCTCTGACACCAGCACAGCAAACCCGC...AAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGACATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp ATGCAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATGTCGCTCGTCCTTCAGGTTaGGCATGGGCAGCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: MQPVAEVEEAVVQGEQDVARPSG*AWAAGG
Trigger: TCCACCGGCTGCCCATGCCCAACCTGAAGGACGAGC...GACATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CCGTACAGTCCAGCCTCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGACCTTGTGCAGCTTTaGGGCCCGGGGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PYSPASTSAGLKPSRKTLDLVQL*GPGLRA
Trigger: GGCTCTGAGCCCCGGGCCCCAAAGCTGCACAAGGTC...CAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR CCA 90 bp CCAGGCACTGTACAGCGACGTGGTGATGTAGAGGCGCTTCCCATCCAGGCTGAGAGGCAGTGGCTGGTGTaGAGAAAGGCCAGTTCGCAC +
Preference number: 4 (lower is better)
Translates to: PGTVQRRGDVEALPIQAERQWLV*RKASSH
Trigger: GTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT...CTCAGCCTGGATGGGAAGCGCCTCTACATCACCACGTCGCTGTACAGTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTTGGCCAGGCAGTGGCTaGTGTGGAGAAAGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: VEAGTRSHSPTVQHPQVSWPGSG*CGERPV
Trigger: AACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCA...AGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CCA 90 bp AGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCGAGGCGGGGTCTCTGTaGGTCAGAGATGTCATACTG +
Preference number: 4 (lower is better)
Translates to: SAQPTKPWAASGLCRKRIEAGSL*VRDVIL
Trigger: CAGTATGACATCTCTGACCCACAGAGACCCCGCCTC...GATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp ATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCACTAGGGGCTCTGGCTaGGACTTTAGTTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: MVELSAQPTKPWAASGLCTRGSG*DFSSSS
Trigger: GGACGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGT...GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GCTGAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGAGTCCACCAGGAAGTTaGGGTTCAACTTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AECAAHKALGSVWVVQEASPPGS*GSTSAL
Trigger: GAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACT...CGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp ATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCGCCACAGTCTCAGCTTaGCTGTGTGGTACATGCTGC +
Preference number: 4 (lower is better)
Translates to: MVELSAQPTKPWAASGLCATVSA*LCGTCC
Trigger: GCAGCATGTACCACACAGCCAAGCTGAGACTGTGGC...GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR CAA 72 bp TGGCTCCCGTACAGTCCAGCCTCCACATCAGCGGGGTaGAAGCCATCTCGTAAGACATTGGGAGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: WLPYSPASTSAG*KPSRKTLGAAH
Trigger: GTGGGCAGCTCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTACGGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
3UTR CAA 72 bp AGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTaGTGCAGGAAGCGGATCTCCAAGGGAATAAGCCCA +
Preference number: 4 (lower is better)
Translates to: SAQPTKPWAASG*CRKRISKGISP
Trigger: TGGGCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp CAGGATGTCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTCCGACTGGTACACTTTaGTCCCGGCGGGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QDVGDQAWHFGQQPALHFPTGTL*SRRVCC
Trigger: ACAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGG...AAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGACATCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp CCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAGTGTTCCATCCTGAGTaGTGCAGCTCGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PTKPWAASGLCRKRISKGVFHPE*CSSSFR
Trigger: CCTGAAGGACGAGCTGCATCACTCAGGATGGAACAC...TCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTGCAGGTGTTCCATCCTaGGTGATGCAGCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: VSRLVPEVIAQRCSTPRSAGVPS*VMQLVL
Trigger: AAGGACGAGCTGCATCACTCAGGATGGAACACCTGC...AGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR TCA 90 bp GGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGGGCGTCTCCCAGGGAGCTaGTCATCACTTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GDEGGVQIQMSELQSPPGRLPGS*SSLPRW
Trigger: CCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACG...CCCTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTCCCCCACATCAGCGGGGTTaGAGCCATCTCGTAAGACAT +
Preference number: 4 (lower is better)
Translates to: EAGTRSHSPTVQHPQVSPPHQRG*SHLVRH
Trigger: ATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGG...GGGAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR TCA 90 bp GAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATGATCACCTTCTCCACTaGCCATGTACCTCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: ECAAHKALGSVWVVQEADDHLLH*PCTSLV
Trigger: AACGAGGGAGGTACATGGTCAGTGGAGAAGGTGATC...ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGGCTTCCCATCCAGGCTaGGCTGGATCATCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKASHPG*AGSSEG
Trigger: GCCCTCAGATGATCCAGCTCAGCCTGGATGGGAAGC...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp GCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAGCCCCACCGAAGCAGCTGCTaGAGGTGTTCCATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: ALGSVWVVQEADLQGNKPHRSSC*RCSILS
Trigger: ACTCAGGATGGAACACCTGCAGCAGCTGCTTCGGTG...GGGCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GCCATTGCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGTATCACCGAAGCAGCTaGTGCAGGTGTTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: AIALDVSQGADHHFPAGQYHRSS*CRCSIL
Trigger: CAGGATGGAACACCTGCAGCAGCTGCTTCGGTGATA...CTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGCAATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
CDS-3UTR GCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGTGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKWLCGT*CQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCA...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp GATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGGGCTGGTTGGGCTCAATGACATaGCTTGTGCAGCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: DVRATIAPRVAELMGKGWLGSMT*LVQLWG
Trigger: GCCCCAAAGCTGCACAAGGCATGTCATTGAGCCCAA...CCAGCCCTTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CCAGGCACTGTACAGCGACGTGGTGATGTAGAGGCGCTTCCCATCCAGGCTGAGAGCCGGTGGATGACCTaGCAATACTGGGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: PGTVQRRGDVEALPIQAESRWMT*QYWGDL
Trigger: CAAGTCTCCCCAGTATTGCCAGGTCATCCACCGGCT...CTCAGCCTGGATGGGAAGCGCCTCTACATCACCACGTCGCTGTACAGTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CAGGTCCCCATGCAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGAGCCGGTGGATGACCTaGCAATACTGGGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: QVPMQPVAEVEEAVVQGESRWMT*QYWGDL
Trigger: CAAGTCTCCCCAGTATTGCCAGGTCATCCACCGGCT...CTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCATGGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGGGCATGGGCAGCCGGTaGATGACCTGGCAATACTGG +
Preference number: 4 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMGMGSR*MTWQYW
Trigger: CCAGTATTGCCAGGTCATCCACCGGCTGCCCATGCC...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp AGCTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAAGGCATGGGCAGCCGGTaGATGACCTGGCAATACTGG +
Preference number: 4 (lower is better)
Translates to: SLAVWYMLPRVGCQERAEGMGSR*MTWQYW
Trigger: CCAGTATTGCCAGGTCATCCACCGGCTGCCCATGCC...TTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TCCTCCAGCACTTGCACAGGGCCTCCCTTAACAATGCTGCCTCCGAGGAAGAGCTGGGCAGCACCAGCTTaGTGCGCGACTTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: SSSTCTGPPLTMLPPRKSWAAPA*CATWCY
Trigger: ATAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCA...GCTCTTCCTCGGAGGCAGCATTGTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CCCATGCAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATAGGCAGTGGCTGGTGTaGAGAAAGGCCAGTTCGCAC +
Preference number: 4 (lower is better)
Translates to: PMQPVAEVEEAVVQGEQDRQWLV*RKASSH
Trigger: GTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT...ATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GCTCCTTCCCGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: APSRSPPGSWGSTSALLLPLARQ*LVWRKA
Trigger: GGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGG...TAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCACCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: AAHSVLIMTLCRGWYQKSPLARQ*LVWRKA
Trigger: GGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGG...TGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CCA 90 bp ACATTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: TLGAAHSVLIMTLCRGWYPLARQ*LVWRKA
Trigger: GGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGG...GTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CCA 90 bp GCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGCATCTCGTAAGACATTaGGAGCTGCCCACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: AHKALGSVWVVQEADLQGHLVRH*ELPTQC
Trigger: GCACTGAGTGGGCAGCTCCCAATGTCTTACGAGATG...CCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGGCCTTGGGCAGCGTCTaGGTTGTGCAGGAAGCGGAT +
Preference number: 4 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMALGSV*VVQEAD
Trigger: ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGCAGCCCACAAAGCCTTaGGCAGCGTCTGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKQPTKP*AASGLC
Trigger: GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTG...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGGTCGGTGATCAGGCCTaGCATTTCGGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKVGDQA*HFGQQP
Trigger: TGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGAC...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAGCCCGAGGCGGGGTCTCTGTaGGTCAGAGATGTCATACTG +
Preference number: 4 (lower is better)
Translates to: ALGSVWVVQEADLQGNKPEAGSL*VRDVIL
Trigger: CAGTATGACATCTCTGACCCACAGAGACCCCGCCTC...GGGCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGGCTGGGCCACGCTCTaGAGGGTGAAGGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: WCLQELMEKQHSEQQATVGWATL*RVKAPS
Trigger: GGAGGGAGCCTTCACCCTCCAGAGCGTGGCCCAGCC...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426705.6
CDS-3UTR CCA 90 bp AGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGCCACGGCAGTGCGGCTaGCCTAGGTCCCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: SADHDIVSRLVPEVIAQRPRQCG*PRSPLQ
Trigger: CTGGAGTGGGGACCTAGGCCAGCCGCACTGCCGTGG...CCGTTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423070.5
CDS-3UTR TCA 90 bp GTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCCACATCAGCGGGGTTaGAGCCATCTCGTAAGACAT +
Preference number: 4 (lower is better)
Translates to: VSRLVPEVIAQRCSTPRSPHQRG*SHLVRH
Trigger: ATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGG...AGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR TCA 90 bp GCTCCTTCCCGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTAGCTGGATGGTGGAGCTaGGTGCGCAGCCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: APSRSPPGSWGSTSALLLAGWWS*VRSPQS
Trigger: GCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGC...TAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTGATCACCTTCTCCACTaGCCATGTACCTCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: VEAGTRSHSPTVQHPQVSDHLLH*PCTSLV
Trigger: AACGAGGGAGGTACATGGTCAGTGGAGAAGGTGATC...AGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR TCA 90 bp GTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTGATCACCTTCTCCACTaGCCATGTACCTCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: VSRLVPEVIAQRCSTPRSDHLLH*PCTSLV
Trigger: AACGAGGGAGGTACATGGTCAGTGGAGAAGGTGATC...AGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR TCA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAGAGCAGGATGTCGGTaGTCAGGCCTGGCATTTCGG +
Preference number: 4 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMRAGCR*SGLAFR
Trigger: CCGAAATGCCAGGCCTGATCACCGACATCCTGCTCT...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp AAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAGCAGAGCAGGATGTCGGTaGTCAGGCCTGGCATTTCGG +
Preference number: 4 (lower is better)
Translates to: KPWAASGLCRKRISKGISRAGCR*SGLAFR
Trigger: CCGAAATGCCAGGCCTGATCACCGACATCCTGCTCT...GCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp TACAGTCCAGCCTCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGACTGAGCTGGATCATCTaGGGGCCTCCAGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: YSPASTSAGLKPSRKTLGLSWII*GPPATR
Trigger: ACGGGTGGCTGGAGGCCCTCAGATGATCCAGCTCAG...TCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR TCA 90 bp GCCACCCGTTTTCCCTTGACCACTAGGGGCTCTGGCTGGGACTTTAGTTCCTCGTGTACAGCGACGTGGTaGTGTAGAGGCGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ATRFPLTTRGSGWDFSSSCTATW*CRGASH
Trigger: ATGGGAAGCGCCTCTACATCACCACGTCGCTGTACA...CGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGAGAGCTGGAGACACATaGCCCATGCTGCCGACTGGT +
Preference number: 4 (lower is better)
Translates to: VLVEALDGGAECAAHKALRAGDT*PMLPTG
Trigger: ACCAGTCGGCAGCATGGGTCATGTGTCTCCAGCTCT...CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423070.5
CDS-3UTR GCA 90 bp GAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATAATCTGGGGCCTCAGTaGCTGTGTTTCGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: ECAAHKALGSVWVVQEADNLGPQ*LCFGKC
Trigger: GCATTTACCGAAACACAGGCACTGAGGCCCCAGATT...ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp AGCTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGGTGCGCGACTTGGTaGTATCACCGAAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLAVWYMLPRVGCQERAEWCATW*YHRSSC
Trigger: GCAGCTGCTTCGGTGATAGCACCAAGTCGCGCACCA...TTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GACATTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTAGGCTCAATGACCTTGTaGAGCTTTGGGGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: DIGSCPLSADHDIVSRLVGSMTL*SFGARG
Trigger: GCCCCGGGCCCCAAAGCTGCACAAGGTCATTGAGCC...TACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR GCA 90 bp CCGTACAGTCCAGCCTCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGTCATAGCCCAACGGTaGAGCACCCCCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PYSPASTSAGLKPSRKTLVIAQR*STPRSL
Trigger: GAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGAC...CAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR GCA 90 bp TCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAGCTGCCCACTCAGTCATAGCCCAACGGTaGAGCACCCCCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: STSAGLKPSRKTLGAAHSVIAQR*STPRSL
Trigger: GAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGAC...TGAGTGGGCAGCTCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR GCA 90 bp TCATGGCGCTGCCAGTCCCATACATATAAGTGGCTCCCGTACAGTCCAGCCTCCGCAGCGTCTGGGTTGTaGAGGAAGCGGATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SWRCQSHTYKWLPYSPASAASGL*RKRISK
Trigger: CTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGC...GGAGGCTGGACTGTACGGGAGCCACTTATATGTATGGGACTGGCAGCGCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR GCA 90 bp TCATGGCGCTGCCAGTCCCATACATATAAGTGGCTCCCGTACAGTCCAGCCTCCGATGGTGGAGCTGAGTaGGCAGCCCACAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SWRCQSHTYKWLPYSPASDGGAE*AAHKAL
Trigger: CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATC...GGAGGCTGGACTGTACGGGAGCCACTTATATGTATGGGACTGGCAGCGCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR GCA 90 bp AGCTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAAGATGGTGGAGCTGAGTaGGCAGCCCACAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SLAVWYMLPRVGCQERAEDGGAE*AAHKAL
Trigger: CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATC...TTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp TGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCGTGTCTACATCAACCTaGAGCATCACAGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: CAAHKALGSVWVVQEADLVSTST*SITEPS
Trigger: GGAAGGCTCTGTGATGCTGCAGGTTGATGTAGACAC...GAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp TCCCTCGTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTGCGCAGCCCACAAACTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SLVLVEALDGGAECAAHKLCGTC*QGSGAK
Trigger: CTTGGCACCCGACCCTTGGCAGCATGTACCACACAG...TTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAACGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGCTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMLCGTC*QGSGAK
Trigger: CTTGGCACCCGACCCTTGGCAGCATGTACCACACAG...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp TTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGTGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LGAAHSVLIMTLCRGWYQWLCGT*CQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCA...CTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR GCA 90 bp CAGGATGTCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTAGGAGGGTGAGGTTGTaGTGGGAAGAGCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: QDVGDQAWHFGQQPALHFRRVRL*WEELET
Trigger: TGTCTCCAGCTCTTCCCAGCACAACCTCACCCTCCT...AAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGACATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423070.5
CDS-3UTR CCA 90 bp CTGTGGGTCAGAGATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAACCCTGGGTCCTTTCATaGCCTCCAGAGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LWVRDVILPQVPMQPVAEPWVLS*PPEGWS
Trigger: ACTCCACCCCTCTGGAGGCCATGAAAGGACCCAGGG...TTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATCTCTGACCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGGCATGGGCAGCCGGTaGATGACCTGGCAATACTGG +
Preference number: 4 (lower is better)
Translates to: WLCGTCCQGSGAKREQNEGMGSR*MTWQYW
Trigger: CCAGTATTGCCAGGTCATCCACCGGCTGCCCATGCC...TTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAGTAGAGGAAGCGGGCATGGGCAGCCGGTaGATGACCTGGCAATACTGG +
Preference number: 4 (lower is better)
Translates to: DVILPQVPMQPVAEVEEAGMGSR*MTWQYW
Trigger: CCAGTATTGCCAGGTCATCCACCGGCTGCCCATGCC...CGCTTCCTCTACTTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGCTCGTCCTTCAGGTTaGGCATGGGCAGCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: VGDEGGVQIQMSELQSPPARPSG*AWAAGG
Trigger: TCCACCGGCTGCCCATGCCCAACCTGAAGGACGAGC...TGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp ATGCAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATGTCGCTTGGTGCGCGACTTaGTGCTATCACCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: MQPVAEVEEAVVQGEQDVAWCAT*CYHRSS
Trigger: GCTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGC...GACATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp AGCTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGGGCAGCACCAGCTTaGTGCGCGACTTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: SLAVWYMLPRVGCQERAEWAAPA*CATWCY
Trigger: ATAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCA...TTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGACCTTGTGCAGCTTTaGGGCCCGGGGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: WCLQELMEKQHSEQQATVDLVQL*GPGLRA
Trigger: GGCTCTGAGCCCCGGGCCCCAAAGCTGCACAAGGTC...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368868.10
ENST00000426705.6
CDS-3UTR CCA 90 bp CAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATGTCGGTAGGCCAGTTCGCACTTaGCATGGATGTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: QPVAEVEEAVVQGEQDVGRPVRT*HGCPWA
Trigger: AGCCCAAGGACATCCATGCCAAGTGCGAACTGGCCT...ACCGACATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TCGTCCTCCAGCATGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAGTAGAGGAAAGGCAGTGGCTGGTGTaGAGAAAGGCCAGTTCGCAC +
Preference number: 4 (lower is better)
Translates to: SSSSMPQVPMQPVAEVEERQWLV*RKASSH
Trigger: GTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT...TTCCTCTACTTCAGCAACTGGCTGCATGGGGACCTGAGGCATGCTGGAGGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427977.6
CDS-3UTR CCA 90 bp TGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAATCATCACTTCCCCGCTaGCCAGGCAGTGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: WLCGTCCQGSGAKREQNESSLPR*PGSGWC
Trigger: ACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGA...TTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp AAATCCAGATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAATCATCACTTCCCCGCTaGCCAGGCAGTGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: KSRCQSYNRPQGSGAHGQSSLPR*PGSGWC
Trigger: ACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGA...TTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATCTGGATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAGCTGCCCACTCACAGCCCACAAAGCCTTaGGCAGCGTCTGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: STSAGLKPSRKTLGAAHSQPTKP*AASGLC
Trigger: GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTG...TGAGTGGGCAGCTCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp TGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAACAGCCCACAAAGCCTTaGGCAGCGTCTGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: WLCGTCCQGSGAKREQNEQPTKP*AASGLC
Trigger: GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTG...TTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp AGGGGCTCCTTCCCGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTCTCAGCTTGGCTGTGTaGTACATGCTGCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: RGSFPKSTRKLGFNFSPPLSLAV*YMLPRV
Trigger: GACCCTTGGCAGCATGTACCACACAGCCAAGCTGAG...AGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GCCACCCGTTTTCCCTTGACCACTAGGGGCTCTGGCTGGGACTTTAGTTCCTCGCTCAGCTTGGCTGTGTaGTACATGCTGCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: ATRFPLTTRGSGWDFSSSLSLAV*YMLPRV
Trigger: GACCCTTGGCAGCATGTACCACACAGCCAAGCTGAG...CGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGTGTCCTTGGGCTCAATaGCCTTGTGCAGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKCPWAQ*PCAALG
Trigger: CCCCAAAGCTGCACAAGGTCATTGAGCCCAAGGACA...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368868.10
ENST00000426705.6
CDS-3UTR TCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCACTGAGCTGGATCATCTaGGGGCCTCCAGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSLSWII*GPPATR
Trigger: ACGGGTGGCTGGAGGCCCTCAGATGATCCAGCTCAG...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGCTGAGCTGGATCATCTaGGGGCCTCCAGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: WCLQELMEKQHSEQQATVLSWII*GPPATR
Trigger: ACGGGTGGCTGGAGGCCCTCAGATGATCCAGCTCAG...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp AGCTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGTACAGCGACGTGGTaGTGTAGAGGCGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SLAVWYMLPRVGCQERAECTATW*CRGASH
Trigger: ATGGGAAGCGCCTCTACATCACCACGTCGCTGTACA...TTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp CTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACCGGCGGGTTTGCTGTaGTGGTGTCAGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LSADHDIVSRLVPEVIAQPAGLL*WCQRPL
Trigger: CAGCGGCCTCTGACACCAGCACAGCAAACCCGCCGG...TTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR GCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGCACCGAAGCAGCTGCTaGAGGTGTTCCATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKHRSSC*RCSILS
Trigger: ACTCAGGATGGAACACCTGCAGCAGCTGCTTCGGTG...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAGCCCTTTAGAGACAGGGTCTaGACAATCTCATGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ALGSVWVVQEADLQGNKPFRDRV*TISWRC
Trigger: GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAA...GGGCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp TGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGCAGCGTCTGGGTTGTaGAGGAAGCGGATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: WLCGTCCQGSGAKREQNEAASGL*RKRISK
Trigger: CTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGC...TTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp TCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAGCTGCCCACTCAGATGGTGGAGCTGAGTaGGCAGCCCACAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: STSAGLKPSRKTLGAAHSDGGAE*AAHKAL
Trigger: CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATC...TGAGTGGGCAGCTCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR GCA 90 bp GTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGTCGTCCTCCAGCACTTaGACAGGGCCTCCCTTAACA +
Preference number: 4 (lower is better)
Translates to: VLVEALDGGAECAAHKALSSSST*TGPPLT
Trigger: TGTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGA...CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCTATGACTCAACACATTaGCACAGTCTCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AQPTKPWAASGLCRKRISYDSTH*HSLSLA
Trigger: AGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATA...GGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGCCCTGGGTCCTTTCATaGCCTCCAGAGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: WVMRVEFKSRCQSYNRPQPWVLS*PPEGWS
Trigger: ACTCCACCCCTCTGGAGGCCATGAAAGGACCCAGGG...CTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp AGGGGCTCCTTCCCGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTAGACGATCTCTTCCCTaGGTCCTTTCATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RGSFPKSTRKLGFNFSPPRRSLP*VLSWPP
Trigger: TGGAGGCCATGAAAGGACCCAGGGAAGAGATCGTCT...AGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGAGCCGGTGGATGACCTaGCAATACTGGGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKSRWMT*QYWGDL
Trigger: CAAGTCTCCCCAGTATTGCCAGGTCATCCACCGGCT...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp AAATCCAGATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGCTTGGTGCGCGACTTaGTGCTATCACCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: KSRCQSYNRPQGSGAHGQAWCAT*CYHRSS
Trigger: GCTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGC...TTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATCTGGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAGGCCAGTTCGCACTTaGCATGGATGTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMRPVRT*HGCPWA
Trigger: AGCCCAAGGACATCCATGCCAAGTGCGAACTGGCCT...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGAGGCCAGTTCGCACTTaGCATGGATGTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKRPVRT*HGCPWA
Trigger: AGCCCAAGGACATCCATGCCAAGTGCGAACTGGCCT...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGAGGCAGTGGCTGGTGTaGAGAAAGGCCAGTTCGCAC +
Preference number: 4 (lower is better)
Translates to: FKSRCQSYNRPQGSGAHGRQWLV*RKASSH
Trigger: GTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT...CCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CCGTACAGTCCAGCCTCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGAGGCAGTGGCTGGTGTaGAGAAAGGCCAGTTCGCAC +
Preference number: 4 (lower is better)
Translates to: PYSPASTSAGLKPSRKTLRQWLV*RKASSH
Trigger: GTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT...CAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CCA 90 bp CAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATGTCGGTGTCTGCACAATCTCATaGCGCTGCCAGTCCCATACA +
Preference number: 4 (lower is better)
Translates to: QPVAEVEEAVVQGEQDVGVCTIS*RCQSHT
Trigger: TGTATGGGACTGGCAGCGCCATGAGATTGTGCAGAC...ACCGACATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CAGGATGTCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTAGTCCACCAGGAAGTTaGGGTTCAACTTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QDVGDQAWHFGQQPALHFSPPGS*GSTSAL
Trigger: GAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACT...AAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGACATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGACCCATGCTGCCGACTaGTACACTTTGATCCCGGCG +
Preference number: 4 (lower is better)
Translates to: LGAAHSVLIMTLCRGWYQTHAAD*YTLIPA
Trigger: CGCCGGGATCAAAGTGTACCAGTCGGCAGCATGGGT...CTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423070.5
CDS-3UTR CCA 90 bp TGCCAGTTCCTTAAATTCAGGCATCCAGGGCTGGGGGAAGAGTGGCTCATGCCAGGGCTGGGGGAAGAGTaGCTCATGCCAGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: CQFLKFRHPGLGEEWLMPGLGEE*LMPVIP
Trigger: TGGGATTACTGGCATGAGCCACTCTTCCCCCAGCCC...TGGCATGAGCCACTCTTCCCCCAGCCCTGGATGCCTGAATTTAAGGAACTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR CCA 90 bp TACAGTCCAGCCTCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGATCAGGCATCCAGGGCTaGGGGAAGAGTGGCTCATGC +
Preference number: 4 (lower is better)
Translates to: YSPASTSAGLKPSRKTLGSGIQG*GKSGSC
Trigger: GCATGAGCCACTCTTCCCCCAGCCCTGGATGCCTGA...TCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455839.5
3UTR CAA 72 bp AGGCAGTGGCTGGTGTGGAGAAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGCTCAATGACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RQWLVWRKASSH*AWMSLGSMTLC
Trigger: GCACAAGGTCATTGAGCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR TCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCACCACCCGTTTTCCCTTaGCCACTAGGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSPPVFP*PLGALA
Trigger: AGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGG...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp CTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTCTGAGCTGGATCATCTaGGGGCCTCCAGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: LQELMEKQHSEQQATVVSLSWII*GPPATR
Trigger: ACGGGTGGCTGGAGGCCCTCAGATGATCCAGCTCAG...ACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGCTTCCCATCCAGGCTaGGCTGGATCATCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: WCLQELMEKQHSEQQATVASHPG*AGSSEG
Trigger: GCCCTCAGATGATCCAGCTCAGCCTGGATGGGAAGC...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGCTTCCCATCCAGGCTaGGCTGGATCATCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSASHPG*AGSSEG
Trigger: GCCCTCAGATGATCCAGCTCAGCCTGGATGGGAAGC...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp CAGGATGTCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTAATCTGGGGCCTCAGTaGCTGTGTTTCGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: QDVGDQAWHFGQQPALHFNLGPQ*LCFGKC
Trigger: GCATTTACCGAAACACAGGCACTGAGGCCCCAGATT...AAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGACATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp TCATGGCGCTGCCAGTCCCATACATATAAGTGGCTCCCGTACAGTCCAGCCTCCTATCACCGAAGCAGCTaGTGCAGGTGTTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: SWRCQSHTYKWLPYSPASYHRSS*CRCSIL
Trigger: CAGGATGGAACACCTGCAGCAGCTGCTTCGGTGATA...GGAGGCTGGACTGTACGGGAGCCACTTATATGTATGGGACTGGCAGCGCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR GCA 90 bp TTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGTCGTCCTCCAGCACTTaGACAGGGCCTCCCTTAACA +
Preference number: 4 (lower is better)
Translates to: FKSRCQSYNRPQGSGAHGSSSST*TGPPLT
Trigger: TGTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGA...CCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGAGCGGGCCACGGCAGTaGGGCTGGCCTAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVSGPRQ*GWPRSP
Trigger: TGGGGACCTAGGCCAGCCGCACTGCCGTGGCCCGCT...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS-3UTR CCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCACCCTGGGTCCTTTCATaGCCTCCAGAGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSPWVLS*PPEGWS
Trigger: ACTCCACCCCTCTGGAGGCCATGAAAGGACCCAGGG...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAGACGATCTCTTCCCTaGGTCCTTTCATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMRRSLP*VLSWPP
Trigger: TGGAGGCCATGAAAGGACCCAGGGAAGAGATCGTCT...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAGTGGCCAGATAATCTaGGGCCTCAGTGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMSGQII*GLSACV
Trigger: AACACAGGCACTGAGGCCCCAGATTATCTGGCCACT...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGGGTCAACATCCACAGTaGCCAGATAATCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMGQHPQ*PDNLGP
Trigger: AGGCCCCAGATTATCTGGCCACTGTGGATGTTGACC...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CAGGATGTCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTATGACCTGGCAATACTaGGGAGACTTGGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: QDVGDQAWHFGQQPALHFMTWQY*GDLGST
Trigger: TGTTGACCCCAAGTCTCCCCAGTATTGCCAGGTCAT...AAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGACATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCAGCTTGGTGCGCGACTTaGTGCTATCACCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: AAHSVLIMTLCRGWYQKSAWCAT*CYHRSS
Trigger: GCTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGC...TGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CCA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGGACCTTGTGCAGCTTTaGGGCCCGGGGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQDLVQL*GPGLRA
Trigger: GGCTCTGAGCCCCGGGCCCCAAAGCTGCACAAGGTC...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368868.10
ENST00000426705.6
CDS-3UTR CCA 90 bp GCTCCTTCCCGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTATGGCCAGGCAGTGGCTaGTGTGGAGAAAGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: APSRSPPGSWGSTSALLLWPGSG*CGERPV
Trigger: AACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCA...TAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCCCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSPLARQ*LVWRKA
Trigger: GGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGG...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: VGVQLQPSFYCVYINLQHPLARQ*LVWRKA
Trigger: GGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGG...ATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCATCATCACTTCCCCGCTaGCCAGGCAGTGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSSSLPR*PGSGWC
Trigger: ACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGA...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGGTCTGCACAATCTCATaGCGCTGCCAGTCCCATACA +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKVCTIS*RCQSHT
Trigger: TGTATGGGACTGGCAGCGCCATGAGATTGTGCAGAC...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGCCTTGGGCAGCGTCTaGGTTGTGCAGGAAGCGGAT +
Preference number: 4 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSALGSV*VVQEAD
Trigger: ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GAGATCAGGGTAAAACTGCTTGTCCCAGGCACTGTACAGCGACGTGGTGATGTACAGCCCACAAAGCCTTaGGCAGCGTCTGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: EIRVKLLVPGTVQRRGDVQPTKP*AASGLC
Trigger: GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTG...TACATCACCACGTCGCTGTACAGTGCCTGGGACAAGCAGTTTTACCCTGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGACTAGGGGCTCTGGCTaGGACTTTAGTTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: FKSRCQSYNRPQGSGAHGTRGSG*DFSSSS
Trigger: GGACGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGT...CCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAATGGGGCGCATTGGCTaGGCCACGCTCTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ISWCLQELMEKQHSEQQAMGRIG*ATLWRV
Trigger: CACCCTCCAGAGCGTGGCCCAGCCAATGCGCCCCAT...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426705.6
CDS-3UTR CCA 90 bp ACAGGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACCACGGCAGTGCGGCTaGCCTAGGTCCCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: TGLRVYFLVPPRAHGKAAPRQCG*PRSPLQ
Trigger: CTGGAGTGGGGACCTAGGCCAGCCGCACTGCCGTGG...TGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426705.6
CDS-3UTR CCA 90 bp TCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCCAGTCCCATACATATTGCCTTGTGCAGCTTTaGGGCCCGGGGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SFRDRVCTISWRCQSHTYCLVQL*GPGLRA
Trigger: GGCTCTGAGCCCCGGGCCCCAAAGCTGCACAAGGCA...ATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
3UTR CAA 72 bp TATAAGTGGCTCCCGTACAGTCCTTTGCCATTGCCCTaGACGTCTCCCAGGGAGCTGATCATCACTTCCCCG +
Preference number: 4 (lower is better)
Translates to: YKWLPYSPLPLP*TSPRELIITSP
Trigger: CGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGCAATGGCAAAGGACTGTACGGGAGCCACTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455397.5
CDS-3UTR TCA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGGCTGGATGGTGGAGCTaGGTGCGCAGCCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQAGWWS*VRSPQS
Trigger: GCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGC...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp TCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAGCTGGATGGTGGAGCTaGGTGCGCAGCCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: STRKLGFNFSPPFTVSTSAGWWS*VRSPQS
Trigger: GCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGC...TGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp TCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAGCTGCCCACTCAGATCACCTTCTCCACTaGCCATGTACCTCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: STSAGLKPSRKTLGAAHSDHLLH*PCTSLV
Trigger: AACGAGGGAGGTACATGGTCAGTGGAGAAGGTGATC...TGAGTGGGCAGCTCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR TCA 90 bp TCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACACCACCCGTTTTCCCTTaGCCACTAGGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SWCLQELMEKQHSEQQATPPVFP*PLGALA
Trigger: AGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGG...TGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp AAGGGAATAAGCCCATCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCGCTTCCCATCCAGGCTaGGCTGGATCATCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: KGISPSFRDRVCTISWRCASHPG*AGSSEG
Trigger: GCCCTCAGATGATCCAGCTCAGCCTGGATGGGAAGC...GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCTTATTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGCCGGCGGGTTTGCTGTaGTGGTGTCAGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: VTSLFLGASKSSWKSSTVPAGLL*WCQRPL
Trigger: CAGCGGCCTCTGACACCAGCACAGCAAACCCGCCGG...CACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
CDS-3UTR GCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGAATCTGGGGCCTCAGTaGCTGTGTTTCGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKNLGPQ*LCFGKC
Trigger: GCATTTACCGAAACACAGGCACTGAGGCCCCAGATT...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp AGTTCGCACTTGGCATGGATGTCCTTGGGCTCAATGACCTTGTGCAGCTTTGGGCACCGAAGCAGCTGCTaGAGGTGTTCCATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: SSHLAWMSLGSMTLCSFGHRSSC*RCSILS
Trigger: ACTCAGGATGGAACACCTGCAGCAGCTGCTTCGGTG...CCCAAAGCTGCACAAGGTCATTGAGCCCAAGGACATCCATGCCAAGTGCGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR GCA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAGGCTCAATGACCTTGTaGAGCTTTGGGGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ISWCLQELMEKQHSEQQAGSMTL*SFGARG
Trigger: GCCCCGGGCCCCAAAGCTGCACAAGGTCATTGAGCC...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368868.10
ENST00000426705.6
CDS-3UTR GCA 90 bp TTAGTTCCTCGTCCTCCAGCATGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAGTTTAGAGACAGGGTCTaGACAATCTCATGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LVPRPPACLRSPCSQLLKFRDRV*TISWRC
Trigger: GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAA...CTTCAGCAACTGGCTGCATGGGGACCTGAGGCATGCTGGAGGACGAGGAACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427977.6
CDS-3UTR GCA 90 bp CTGTGGGTCAGAGATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAATCAGAGATGTCATACTaGCTCAGGTCCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: LWVRDVILPQVPMQPVAESEMSY*LRSPCS
Trigger: GCTGCATGGGGACCTGAGGCAGTATGACATCTCTGA...TTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATCTCTGACCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATCGTCCTCCAGCACTTaGACAGGGCCTCCCTTAACA +
Preference number: 4 (lower is better)
Translates to: AAHSVLIMTLCRGWYQKSSSSST*TGPPLT
Trigger: TGTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGA...TGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000443708.5
CDS-3UTR GCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGGTGTCTACATCAACCTaGAGCATCACAGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKVSTST*SITEPS
Trigger: GGAAGGCTCTGTGATGCTGCAGGTTGATGTAGACAC...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp CAGTCCCATACATATAAGTGGCTCCCGTACAGTCCAGCCTCCACATCAGCGGGGGTGTCTACATCAACCTaGAGCATCACAGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: QSHTYKWLPYSPASTSAGVSTST*SITEPS
Trigger: GGAAGGCTCTGTGATGCTGCAGGTTGATGTAGACAC...CCCCGCTGATGTGGAGGCTGGACTGTACGGGAGCCACTTATATGTATGGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR GCA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGCTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: WCLQELMEKQHSEQQATVLCGTC*QGSGAK
Trigger: CTTGGCACCCGACCCTTGGCAGCATGTACCACACAG...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCATCCCTCCGCACGTTCTaGAGCACACATCCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: ISWCLQELMEKQHSEQQASLRTF*STHPSG
Trigger: CCCGCTGGGATGTGTGCTGCAGAACGTGCGGAGGGA...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426705.6
CDS-3UTR GCA 90 bp CCGTACAGTCCAGCCTCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGTTGGGCTCAATGACATaGCTTGTGCAGCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PYSPASTSAGLKPSRKTLLGSMT*LVQLWG
Trigger: GCCCCAAAGCTGCACAAGGCATGTCATTGAGCCCAA...CAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR GCA 90 bp GTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTCTCCACTGCTGGATTTaGCAGTTCCTTAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: VEAGTRSHSPTVQHPQVSLHCWI*QFLKFR
Trigger: CCTGAATTTAAGGAACTGGCAAATCCAGCAGTGGAG...AGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR CCA 90 bp CTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTGCGGGTTTGCTGTGCTaGTGTCAGAGGCCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LQELMEKQHSEQQATVVSAGLLC*CQRPLF
Trigger: GAACAGCGGCCTCTGACACCAGCACAGCAAACCCGC...ACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368868.10
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp TCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACACCCTGGGTCCTTTCATaGCCTCCAGAGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: SWCLQELMEKQHSEQQATPWVLS*PPEGWS
Trigger: ACTCCACCCCTCTGGAGGCCATGAAAGGACCCAGGG...TGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAAGTGGCCAGATAATCTaGGGCCTCAGTGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: WLCGTCCQGSGAKREQNESGQII*GLSACV
Trigger: AACACAGGCACTGAGGCCCCAGATTATCTGGCCACT...TTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCGCTCGTCCTTCAGGTTaGGCATGGGCAGCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSARPSG*AWAAGG
Trigger: TCCACCGGCTGCCCATGCCCAACCTGAAGGACGAGC...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGCTTGGTGCGCGACTTaGTGCTATCACCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSAWCAT*CYHRSS
Trigger: GCTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGC...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCATGGGCAGCACCAGCTTaGTGCGCGACTTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSWAAPA*CATWCY
Trigger: ATAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCA...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp ACATTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACAGGCCAGTTCGCACTTaGCATGGATGTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TLGAAHSVLIMTLCRGWYRPVRT*HGCPWA
Trigger: AGCCCAAGGACATCCATGCCAAGTGCGAACTGGCCT...GTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCATGGCCAGGCAGTGGCTaGTGTGGAGAAAGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSWPGSG*CGERPV
Trigger: AACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCA...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACCGCTGGCCAGGCAGTaGCTGGTGTGGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: EFISWCLQELMEKQHSEQPLARQ*LVWRKA
Trigger: GGCCTTTCTCCACACCAGCCACTGCCTGGCCAGCGG...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAATCATCACTTCCCCGCTaGCCAGGCAGTGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSADHDIVSRLVPEVIAQSSLPR*PGSGWC
Trigger: ACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGA...TTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CCA 90 bp TGCCAGTTCCTTAAATTCAGGCATCCAGGGCTGGGGGAAGAGTGGCTCATGCCACATCTCGTAAGACATTaGGAGCTGCCCACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: CQFLKFRHPGLGEEWLMPHLVRH*ELPTQC
Trigger: GCACTGAGTGGGCAGCTCCCAATGTCTTACGAGATG...TGGCATGAGCCACTCTTCCCCCAGCCCTGGATGCCTGAATTTAAGGAACTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR CCA 90 bp CTGTGGGTCAGAGATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAGTCTGCACAATCTCATaGCGCTGCCAGTCCCATACA +
Preference number: 4 (lower is better)
Translates to: LWVRDVILPQVPMQPVAEVCTIS*RCQSHT
Trigger: TGTATGGGACTGGCAGCGCCATGAGATTGTGCAGAC...TTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATCTCTGACCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAACTAGGGGCTCTGGCTaGGACTTTAGTTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: VGDEGGVQIQMSELQSPPTRGSG*DFSSSS
Trigger: GGACGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGT...TGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAAGTCCACCAGGAAGTTaGGGTTCAACTTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: WLCGTCCQGSGAKREQNESPPGS*GSTSAL
Trigger: GAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACT...TTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp ACATTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACGCCACAGTCTCAGCTTaGCTGTGTGGTACATGCTGC +
Preference number: 4 (lower is better)
Translates to: TLGAAHSVLIMTLCRGWYATVSA*LCGTCC
Trigger: GCAGCATGTACCACACAGCCAAGCTGAGACTGTGGC...GTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp TCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTCTTGGGGTCCCATACATATAAGTaGCTCCCGTACAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SVIRPGISGSSQPFTFLGSHTYK*LPYSPL
Trigger: CAAAGGACTGTACGGGAGCCACTTATATGTATGGGA...CCCCAAGAAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455397.5
CDS-3UTR TCA 90 bp TCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACACCGACTGGTACACTTTaGTCCCGGCGGGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SWCLQELMEKQHSEQQATPTGTL*SRRVCC
Trigger: ACAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGG...TGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp AGAGATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAGTAGAGGAAGTGTTCCATCCTGAGTaGTGCAGCTCGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RDVILPQVPMQPVAEVEEVFHPE*CSSSFR
Trigger: CCTGAAGGACGAGCTGCATCACTCAGGATGGAACAC...TTCCTCTACTTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GAGATCAGGGTAAAACTGCTTGTCCCAGGCACTGTACAGCGACGTGGTGATGTAGCAGGTGTTCCATCCTaGGTGATGCAGCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: EIRVKLLVPGTVQRRGDVAGVPS*VMQLVL
Trigger: AAGGACGAGCTGCATCACTCAGGATGGAACACCTGC...TACATCACCACGTCGCTGTACAGTGCCTGGGACAAGCAGTTTTACCCTGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp CCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCTGTCCTTGGGCTCAATaGCCTTGTGCAGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: PLSADHDIVSRLVPEVIACPWAQ*PCAALG
Trigger: CCCCAAAGCTGCACAAGGTCATTGAGCCCAAGGACA...GGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR TCA 90 bp GCTCCTTCCCGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACCACATCAGCGGGGTTaGAGCCATCTCGTAAGACAT +
Preference number: 4 (lower is better)
Translates to: APSRSPPGSWGSTSALLLPHQRG*SHLVRH
Trigger: ATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGG...TAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR TCA 90 bp ACAGGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCAGCTGGATGGTGGAGCTaGGTGCGCAGCCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: TGLRVYFLVPPRAHGKAAAGWWS*VRSPQS
Trigger: GCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGC...TGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR TCA 90 bp TCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCACCACCCGTTTTCCCTTaGCCACTAGGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: STRKLGFNFSPPFTVSTSPPVFP*PLGALA
Trigger: AGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGG...TGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp CATCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCCAGTCCCATACATGCAGCGTCTGGGTTGTaGAGGAAGCGGATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: HLLETGSAQSHGAASPIHAASGL*RKRISK
Trigger: CTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGC...ATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCATCGTCCTCCAGCACTTaGACAGGGCCTCCCTTAACA +
Preference number: 4 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSSSSST*TGPPLT
Trigger: TGTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGA...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp CTGTGGGTCAGAGATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAGTGTCTACATCAACCTaGAGCATCACAGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LWVRDVILPQVPMQPVAEVSTST*SITEPS
Trigger: GGAAGGCTCTGTGATGCTGCAGGTTGATGTAGACAC...TTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATCTCTGACCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp TCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCATGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: STRKLGFNFSPPFTVSTSWLCGT*CQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCA...TGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQWLCGT*CQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCA...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp CAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATGTCGGTTATGACTCAACACATTaGCACAGTCTCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QPVAEVEEAVVQGEQDVGYDSTH*HSLSLA
Trigger: AGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATA...ACCGACATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGACACATGACCCATGCTaGCGACTGGTACACTTTGAT +
Preference number: 4 (lower is better)
Translates to: VLVEALDGGAECAAHKALTHDPC*RLVHFD
Trigger: ATCAAAGTGTACCAGTCGGCAGCATGGGTCATGTGT...CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423070.5
CDS-3UTR GCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGACACATGACCCATGCTaGCGACTGGTACACTTTGAT +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKTHDPC*RLVHFD
Trigger: ATCAAAGTGTACCAGTCGGCAGCATGGGTCATGTGT...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS-3UTR GCA 90 bp TTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGGAGACACATGACCCATaGTGCCGACTGGTACACTTT +
Preference number: 4 (lower is better)
Translates to: LGAAHSVLIMTLCRGWYQETHDP*CRLVHF
Trigger: AAAGTGTACCAGTCGGCAGCATGGGTCATGTGTCTC...CTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423070.5
CDS-3UTR CCA 90 bp GGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCACACCCTGGGTCCTTTCATaGCCTCCAGAGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: GFNFSPPFTVSTSTCSITPWVLS*PPEGWS
Trigger: ACTCCACCCCTCTGGAGGCCATGAAAGGACCCAGGG...TGTGATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GACATTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTAAGACGATCTCTTCCCTaGGTCCTTTCATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: DIGSCPLSADHDIVSRLVRRSLP*VLSWPP
Trigger: TGGAGGCCATGAAAGGACCCAGGGAAGAGATCGTCT...TACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp CCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCAGCCGGTGGATGACCTaGCAATACTGGGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: PLSADHDIVSRLVPEVIASRWMT*QYWGDL
Trigger: CAAGTCTCCCCAGTATTGCCAGGTCATCCACCGGCT...GGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAAGCTCGTCCTTCAGGTTaGGCATGGGCAGCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: QELMEKQHSEQQATVVSKARPSG*AWAAGG
Trigger: TCCACCGGCTGCCCATGCCCAACCTGAAGGACGAGC...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAATGGGCAGCACCAGCTTaGTGCGCGACTTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: LSADHDIVSRLVPEVIAQWAAPA*CATWCY
Trigger: ATAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCA...TTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CCA 90 bp GTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATTCATCACTTCCCCGCTaGCCAGGCAGTGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VGVQLQPSFYCVYINLQHSSLPR*PGSGWC
Trigger: ACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGA...ATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAGCTGCCCACTCATCCCATACATATAAGTaGCTCCCGTACAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: STSAGLKPSRKTLGAAHSSHTYK*LPYSPA
Trigger: GGCTGGACTGTACGGGAGCCACTTATATGTATGGGA...TGAGTGGGCAGCTCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp GCTCCTTCCCGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTAGTCTGCACAATCTCATaGCGCTGCCAGTCCCATACA +
Preference number: 4 (lower is better)
Translates to: APSRSPPGSWGSTSALLLVCTIS*RCQSHT
Trigger: TGTATGGGACTGGCAGCGCCATGAGATTGTGCAGAC...TAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCGCCTTGGGCAGCGTCTaGGTTGTGCAGGAAGCGGAT +
Preference number: 4 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSALGSV*VVQEAD
Trigger: ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCCTTGGGCAGCGTCTaGGTTGTGCAGGAAGCGGAT +
Preference number: 4 (lower is better)
Translates to: PGSWGSTSALLLLCLHQPALGSV*VVQEAD
Trigger: ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC...AGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCCAGCCCACAAAGCCTTaGGCAGCGTCTGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSQPTKP*AASGLC
Trigger: GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTG...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAGTCGGTGATCAGGCCTaGCATTTCGGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ISWCLQELMEKQHSEQQAVGDQA*HFGQQP
Trigger: TGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGAC...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGACTAGGGGCTCTGGCTaGGACTTTAGTTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: WCLQELMEKQHSEQQATVTRGSG*DFSSSS
Trigger: GGACGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGT...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGCCACAGTCTCAGCTTaGCTGTGTGGTACATGCTGC +
Preference number: 4 (lower is better)
Translates to: WCLQELMEKQHSEQQATVATVSA*LCGTCC
Trigger: GCAGCATGTACCACACAGCCAAGCTGAGACTGTGGC...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACATGGGGCGCATTGGCTaGGCCACGCTCTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYMGRIG*ATLWRV
Trigger: CACCCTCCAGAGCGTGGCCCAGCCAATGCGCCCCAT...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS-3UTR TCA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCACCGACTGGTACACTTTaGTCCCGGCGGGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ISWCLQELMEKQHSEQQAPTGTL*SRRVCC
Trigger: ACAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGG...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp TCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGCAGGTGTTCCATCCTaGGTGATGCAGCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: SWCLQELMEKQHSEQQATAGVPS*VMQLVL
Trigger: AAGGACGAGCTGCATCACTCAGGATGGAACACCTGC...TGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAACGTCTCCCAGGGAGCTaGTCATCACTTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: FISWCLQELMEKQHSEQQRLPGS*SSLPRW
Trigger: CCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACG...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGGCTGGATGGTGGAGCTaGGTGCGCAGCCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVAGWWS*VRSPQS
Trigger: GCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGC...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGATCACCTTCTCCACTaGCCATGTACCTCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: WCLQELMEKQHSEQQATVDHLLH*PCTSLV
Trigger: AACGAGGGAGGTACATGGTCAGTGGAGAAGGTGATC...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp AGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCAAGAGCAGGATGTCGGTaGTCAGGCCTGGCATTTCGG +
Preference number: 4 (lower is better)
Translates to: SWGSTSALLLLCLHQPAARAGCR*SGLAFR
Trigger: CCGAAATGCCAGGCCTGATCACCGACATCCTGCTCT...TGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAAGAGCAGGATGTCGGTaGTCAGGCCTGGCATTTCGG +
Preference number: 4 (lower is better)
Translates to: ISWCLQELMEKQHSEQQARAGCR*SGLAFR
Trigger: CCGAAATGCCAGGCCTGATCACCGACATCCTGCTCT...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACCACCCGTTTTCCCTTaGCCACTAGGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: EFISWCLQELMEKQHSEQPPVFP*PLGALA
Trigger: AGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGG...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACCTGAGCTGGATCATCTaGGGGCCTCCAGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYLSWII*GPPATR
Trigger: ACGGGTGGCTGGAGGCCCTCAGATGATCCAGCTCAG...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp GAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTGCTTCCCATCCAGGCTaGGCTGGATCATCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: ELMEKQHSEQQATVVSKCASHPG*AGSSEG
Trigger: GCCCTCAGATGATCCAGCTCAGCCTGGATGGGAAGC...ACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp TCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACATGTACAGCGACGTGGTaGTGTAGAGGCGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SWCLQELMEKQHSEQQATCTATW*CRGASH
Trigger: ATGGGAAGCGCCTCTACATCACCACGTCGCTGTACA...TGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp CTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTTGTACAGCGACGTGGTaGTGTAGAGGCGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LQELMEKQHSEQQATVVSCTATW*CRGASH
Trigger: ATGGGAAGCGCCTCTACATCACCACGTCGCTGTACA...ACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp GTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGACAATCTCATGGCGCTaGCAGTCCCATACATATAAG +
Preference number: 4 (lower is better)
Translates to: VLVEALDGGAECAAHKALTISWR*QSHTYK
Trigger: CTTATATGTATGGGACTGGCAGCGCCATGAGATTGT...CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp AGCTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAAACAATCTCATGGCGCTaGCAGTCCCATACATATAAG +
Preference number: 4 (lower is better)
Translates to: SLAVWYMLPRVGCQERAETISWR*QSHTYK
Trigger: CTTATATGTATGGGACTGGCAGCGCCATGAGATTGT...TTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp GAGATCAGGGTAAAACTGCTTGTCCCAGGCACTGTACAGCGACGTGGTGATGTATCAGAGATGTCATACTaGCTCAGGTCCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: EIRVKLLVPGTVQRRGDVSEMSY*LRSPCS
Trigger: GCTGCATGGGGACCTGAGGCAGTATGACATCTCTGA...TACATCACCACGTCGCTGTACAGTGCCTGGGACAAGCAGTTTTACCCTGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GACATTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACAAAACCCCCTCCACTaGTGGATTTGCCAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: DIGSCPLSADHDIVSRLVQNPLH*WICQFL
Trigger: AAGGAACTGGCAAATCCAGCAGTGGAGGGGGTTTTG...TACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR CCA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGAGCCATGCTGCCGACTaGTACACTTTGATCCCGGCG +
Preference number: 4 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQSHAAD*YTLIPA
Trigger: CGCCGGGATCAAAGTGTACCAGTCGGCAGCATGGCT...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp AGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGAGACGATCTCTTCCCTaGGTCCTTTCATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SADHDIVSRLVPEVIAQRRRSLP*VLSWPP
Trigger: TGGAGGCCATGAAAGGACCCAGGGAAGAGATCGTCT...CCGTTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGGCTCGTCCTTCAGGTTaGGCATGGGCAGCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVARPSG*AWAAGG
Trigger: TCCACCGGCTGCCCATGCCCAACCTGAAGGACGAGC...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAAAGGCCAGTTCGCACTTaGCATGGATGTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LSADHDIVSRLVPEVIAQRPVRT*HGCPWA
Trigger: AGCCCAAGGACATCCATGCCAAGTGCGAACTGGCCT...TTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CCA 90 bp AACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCACAGAGCCTTGGCCAGGCAGTGGCTaGTGTGGAGAAAGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: NFSPPFTVSTSTCSITEPWPGSG*CGERPV
Trigger: AACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCA...AGGCTCTGTGATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCCAGTCCCATACATATTGGCCAGGCAGTGGCTaGTGTGGAGAAAGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SFRDRVCTISWRCQSHTYWPGSG*CGERPV
Trigger: AACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCA...ATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCTGCACAATCTCATaGCGCTGCCAGTCCCATACA +
Preference number: 4 (lower is better)
Translates to: WCLQELMEKQHSEQQATVVCTIS*RCQSHT
Trigger: TGTATGGGACTGGCAGCGCCATGAGATTGTGCAGAC...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTGAGGCGGGGTCTCTGTaGGTCAGAGATGTCATACTG +
Preference number: 4 (lower is better)
Translates to: LQELMEKQHSEQQATVVSEAGSL*VRDVIL
Trigger: CAGTATGACATCTCTGACCCACAGAGACCCCGCCTC...ACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAAGCCACAGTCTCAGCTTaGCTGTGTGGTACATGCTGC +
Preference number: 4 (lower is better)
Translates to: LSADHDIVSRLVPEVIAQATVSA*LCGTCC
Trigger: GCAGCATGTACCACACAGCCAAGCTGAGACTGTGGC...TTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp GGGAGTGTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGTGTGCTGGGAAGAGCTaGAGACACATGACCCATGCT +
Preference number: 4 (lower is better)
Translates to: GSVGDEGGVQIQMSELQSCAGKS*RHMTHA
Trigger: AGCATGGGTCATGTGTCTCCAGCTCTTCCCAGCACA...CGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCACACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423070.5
CDS-3UTR TCA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGGTGTTCCATCCTGAGTaGTGCAGCTCGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQVFHPE*CSSSFR
Trigger: CCTGAAGGACGAGCTGCATCACTCAGGATGGAACAC...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCGCAGGTGTTCCATCCTaGGTGATGCAGCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSAGVPS*VMQLVL
Trigger: AAGGACGAGCTGCATCACTCAGGATGGAACACCTGC...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGGCAGGTGTTCCATCCTaGGTGATGCAGCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQAGVPS*VMQLVL
Trigger: AAGGACGAGCTGCATCACTCAGGATGGAACACCTGC...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGTCCTTGGGCTCAATaGCCTTGTGCAGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQCPWAQ*PCAALG
Trigger: CCCCAAAGCTGCACAAGGTCATTGAGCCCAAGGACA...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368868.10
ENST00000426705.6
CDS-3UTR TCA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAAAGAGCAGGATGTCGGTaGTCAGGCCTGGCATTTCGG +
Preference number: 4 (lower is better)
Translates to: QELMEKQHSEQQATVVSKRAGCR*SGLAFR
Trigger: CCGAAATGCCAGGCCTGATCACCGACATCCTGCTCT...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACCCACCCGTTTTCCCTTaGCCACTAGGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYPPVFP*PLGALA
Trigger: AGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGG...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCTTCCCATCCAGGCTaGGCTGGATCATCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: FISWCLQELMEKQHSEQQASHPG*AGSSEG
Trigger: GCCCTCAGATGATCCAGCTCAGCCTGGATGGGAAGC...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp GTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATTGTACAGCGACGTGGTaGTGTAGAGGCGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: VGVQLQPSFYCVYINLQHCTATW*CRGASH
Trigger: ATGGGAAGCGCCTCTACATCACCACGTCGCTGTACA...ATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp GGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCACATGTACAGCGACGTGGTaGTGTAGAGGCGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GFNFSPPFTVSTSTCSITCTATW*CRGASH
Trigger: ATGGGAAGCGCCTCTACATCACCACGTCGCTGTACA...TGTGATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GGGAGTGTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGAATCTGGGGCCTCAGTaGCTGTGTTTCGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: GSVGDEGGVQIQMSELQSNLGPQ*LCFGKC
Trigger: GCATTTACCGAAACACAGGCACTGAGGCCCCAGATT...CGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCACACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp CCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTCACCGAAGCAGCTGCTaGAGGTGTTCCATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: PGSWGSTSALLLLCLHQPHRSSC*RCSILS
Trigger: ACTCAGGATGGAACACCTGCAGCAGCTGCTTCGGTG...AGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp TCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACATATCACCGAAGCAGCTaGTGCAGGTGTTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: SWCLQELMEKQHSEQQATYHRSS*CRCSIL
Trigger: CAGGATGGAACACCTGCAGCAGCTGCTTCGGTGATA...TGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGGTGCGCGACTTGGTaGTATCACCGAAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QELMEKQHSEQQATVVSKWCATW*YHRSSC
Trigger: GCAGCTGCTTCGGTGATAGCACCAAGTCGCGCACCA...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACGTCATAGCCCAACGGTaGAGCACCCCCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYVIAQR*STPRSL
Trigger: GAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGAC...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR GCA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAAGCAGCGTCTGGGTTGTaGAGGAAGCGGATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: QELMEKQHSEQQATVVSKAASGL*RKRISK
Trigger: CTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGC...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCATCGTCCTCCAGCACTTaGACAGGGCCTCCCTTAACA +
Preference number: 4 (lower is better)
Translates to: ISWCLQELMEKQHSEQQASSSST*TGPPLT
Trigger: TGTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGA...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTGTCTACATCAACCTaGAGCATCACAGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: WCLQELMEKQHSEQQATVVSTST*SITEPS
Trigger: GGAAGGCTCTGTGATGCTGCAGGTTGATGTAGACAC...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVWLCGT*CQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCA...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp AAGGGAATAAGCCCATCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCTTGGGCTCAATGACATaGCTTGTGCAGCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: KGISPSFRDRVCTISWRCLGSMT*LVQLWG
Trigger: GCCCCAAAGCTGCACAAGGCATGTCATTGAGCCCAA...GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCTTATTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAGACGATCTCTTCCCTaGGTCCTTTCATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LQELMEKQHSEQQATVVSRRSLP*VLSWPP
Trigger: TGGAGGCCATGAAAGGACCCAGGGAAGAGATCGTCT...ACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp AAGGGAATAAGCCCATCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCGGTCAACATCCACAGTaGCCAGATAATCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: KGISPSFRDRVCTISWRCGQHPQ*PDNLGP
Trigger: AGGCCCCAGATTATCTGGCCACTGTGGATGTTGACC...GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCTTATTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGGTCAACATCCACAGTaGCCAGATAATCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SWCLQELMEKQHSEQQATGQHPQ*PDNLGP
Trigger: AGGCCCCAGATTATCTGGCCACTGTGGATGTTGACC...TGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCATGACCTGGCAATACTaGGGAGACTTGGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: PLSADHDIVSRLVPEVIAMTWQY*GDLGST
Trigger: TGTTGACCCCAAGTCTCCCCAGTATTGCCAGGTCAT...GGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAAGCTTGGTGCGCGACTTaGTGCTATCACCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: EFISWCLQELMEKQHSEQAWCAT*CYHRSS
Trigger: GCTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGC...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAATGGGCAGCACCAGCTTaGTGCGCGACTTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: EFISWCLQELMEKQHSEQWAAPA*CATWCY
Trigger: ATAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCA...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAAAGGCAGTGGCTGGTGTaGAGAAAGGCCAGTTCGCAC +
Preference number: 4 (lower is better)
Translates to: QELMEKQHSEQQATVVSKRQWLV*RKASSH
Trigger: GTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp ACAGGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCAAGGCAGTGGCTGGTGTaGAGAAAGGCCAGTTCGCAC +
Preference number: 4 (lower is better)
Translates to: TGLRVYFLVPPRAHGKAARQWLV*RKASSH
Trigger: GTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT...TGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CCA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTCATCACTTCCCCGCTaGCCAGGCAGTGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWSSLPR*PGSGWC
Trigger: ACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGA...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACACATCTCGTAAGACATTaGGAGCTGCCCACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: SWCLQELMEKQHSEQQATHLVRH*ELPTQC
Trigger: GCACTGAGTGGGCAGCTCCCAATGTCTTACGAGATG...TGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CCA 90 bp CTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACATCTCGTAAGACATTaGGAGCTGCCCACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: LSADHDIVSRLVPEVIAQHLVRH*ELPTQC
Trigger: GCACTGAGTGGGCAGCTCCCAATGTCTTACGAGATG...TTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CCA 90 bp CGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCTCGTAAGACATTaGGAGCTGCCCACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: RSPPGSWGSTSALLLLCLHLVRH*ELPTQC
Trigger: GCACTGAGTGGGCAGCTCCCAATGTCTTACGAGATG...TAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp CTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTGTCTGCACAATCTCATaGCGCTGCCAGTCCCATACA +
Preference number: 4 (lower is better)
Translates to: LQELMEKQHSEQQATVVSVCTIS*RCQSHT
Trigger: TGTATGGGACTGGCAGCGCCATGAGATTGTGCAGAC...ACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCCTTGGGCAGCGTCTaGGTTGTGCAGGAAGCGGAT +
Preference number: 4 (lower is better)
Translates to: FISWCLQELMEKQHSEQQALGSV*VVQEAD
Trigger: ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGGCCTTGGGCAGCGTCTaGGTTGTGCAGGAAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWALGSV*VVQEAD
Trigger: ATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGGTCGGTGATCAGGCCTaGCATTTCGGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVVGDQA*HFGQQP
Trigger: TGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGAC...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAGAGGCGGGGTCTCTGTaGGTCAGAGATGTCATACTG +
Preference number: 4 (lower is better)
Translates to: ISWCLQELMEKQHSEQQAEAGSL*VRDVIL
Trigger: CAGTATGACATCTCTGACCCACAGAGACCCCGCCTC...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACTAGGGGCTCTGGCTaGGACTTTAGTTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: STRKLGFNFSPPFTVSTSTRGSG*DFSSSS
Trigger: GGACGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGT...TGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACTAGGGGCTCTGGCTaGGACTTTAGTTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: ISWCLQELMEKQHSEQQATRGSG*DFSSSS
Trigger: GGACGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGT...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCACTCAGCTTGGCTGTGTaGTACATGCTGCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: ISWCLQELMEKQHSEQQALSLAV*YMLPRV
Trigger: GACCCTTGGCAGCATGTACCACACAGCCAAGCTGAG...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCGCCACAGTCTCAGCTTaGCTGTGTGGTACATGCTGC +
Preference number: 4 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSATVSA*LCGTCC
Trigger: GCAGCATGTACCACACAGCCAAGCTGAGACTGTGGC...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGTACGAGTTTATTTCTTaGTGCCTCCAAGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKYEFIS*CLQELM
Trigger: CATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTA...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp AGCTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATACGAGTTTATTTCTTaGTGCCTCCAAGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: SLAVWYMLPRVGCQERAEYEFIS*CLQELM
Trigger: CATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTA...TTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGAGCAATGGGGCGCATTaGCTGGGCCACGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLSNGAH*LGHALE
Trigger: CTCCAGAGCGTGGCCCAGCCAATGCGCCCCATTGCT...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS-3UTR CCA 90 bp TCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACATGTGCTGGGAAGAGCTaGAGACACATGACCCATGCT +
Preference number: 4 (lower is better)
Translates to: SWCLQELMEKQHSEQQATCAGKS*RHMTHA
Trigger: AGCATGGGTCATGTGTCTCCAGCTCTTCCCAGCACA...TGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426705.6
3UTR CAA 72 bp AATGTATATGACTCAACACATTGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: NVYDSTHCHSLS*AVWYMLPRVGC
Trigger: GCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp GAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTGTGTTCCATCCTGAGTaGTGCAGCTCGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ELMEKQHSEQQATVVSKCVFHPE*CSSSFR
Trigger: CCTGAAGGACGAGCTGCATCACTCAGGATGGAACAC...ACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp AACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCCGTCTCCCAGGGAGCTaGTCATCACTTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: NKQQWSVNVYDSTHCHSLRLPGS*SSLPRW
Trigger: CCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACG...GAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp GAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTTGTACAGCGACGTGGTaGTGTAGAGGCGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ELMEKQHSEQQATVVSKCCTATW*CRGASH
Trigger: ATGGGAAGCGCCTCTACATCACCACGTCGCTGTACA...ACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACAGAGCTGGAGACACATaGCCCATGCTGCCGACTGGT +
Preference number: 4 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYRAGDT*PMLPTG
Trigger: ACCAGTCGGCAGCATGGGTCATGTGTCTCCAGCTCT...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS-3UTR GCA 90 bp ACAGGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACACCGAAGCAGCTGCTaGAGGTGTTCCATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: TGLRVYFLVPPRAHGKAAHRSSC*RCSILS
Trigger: ACTCAGGATGGAACACCTGCAGCAGCTGCTTCGGTG...TGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
CDS-3UTR GCA 90 bp AACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCACAGAGCCTTATCACCGAAGCAGCTaGTGCAGGTGTTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: NFSPPFTVSTSTCSITEPYHRSS*CRCSIL
Trigger: CAGGATGGAACACCTGCAGCAGCTGCTTCGGTGATA...AGGCTCTGTGATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTGGTGCGCGACTTGGTaGTATCACCGAAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWWCATW*YHRSSC
Trigger: GCAGCTGCTTCGGTGATAGCACCAAGTCGCGCACCA...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGTCATAGCCCAACGGTaGAGCACCCCCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLVIAQR*STPRSL
Trigger: GAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGAC...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR GCA 90 bp TACAGTCCAGCCTCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAACAATCTCATGGCGCTaGCAGTCCCATACATATAAG +
Preference number: 4 (lower is better)
Translates to: YSPASTSAGLKPSRKTLGTISWR*QSHTYK
Trigger: CTTATATGTATGGGACTGGCAGCGCCATGAGATTGT...TCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR GCA 90 bp CTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTTTTAGAGACAGGGTCTaGACAATCTCATGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LQELMEKQHSEQQATVVSFRDRV*TISWRC
Trigger: GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAA...ACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp CGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTATTTAGAGACAGGGTCTaGACAATCTCATGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RSPPGSWGSTSALLLLCLFRDRV*TISWRC
Trigger: GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAA...TAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGGATGGTGGAGCTGAGTaGGCAGCCCACAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWDGGAE*AAHKAL
Trigger: CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATC...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp AGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCAGAGATGTCATACTaGCTCAGGTCCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: SWGSTSALLLLCLHQPAASEMSY*LRSPCS
Trigger: GCTGCATGGGGACCTGAGGCAGTATGACATCTCTGA...TGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCATCAGAGATGTCATACTaGCTCAGGTCCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: ISWCLQELMEKQHSEQQASEMSY*LRSPCS
Trigger: GCTGCATGGGGACCTGAGGCAGTATGACATCTCTGA...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp GAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTTCGTCCTCCAGCACTTaGACAGGGCCTCCCTTAACA +
Preference number: 4 (lower is better)
Translates to: ELMEKQHSEQQATVVSKCSSSST*TGPPLT
Trigger: TGTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGA...ACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAACTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: FISWCLQELMEKQHSEQQLCGTC*QGSGAK
Trigger: CTTGGCACCCGACCCTTGGCAGCATGTACCACACAG...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACCTGTGTGGTACATGCTaGCAAGGGTCGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYLCGTC*QGSGAK
Trigger: CTTGGCACCCGACCCTTGGCAGCATGTACCACACAG...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp GCTGCCAGTCCCATACATATAAGTGGCTCCCGTACAGTCCTTTGCCATTGCCCTTATGACTCAACACATTaGCACAGTCTCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AASPIHISGSRTVLCHCPYDSTH*HSLSLA
Trigger: AGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATA...AGGGCAATGGCAAAGGACTGTACGGGAGCCACTTATATGTATGGGACTGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455397.5
CDS-3UTR CCA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGCCCTGGGTCCTTTCATaGCCTCCAGAGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLPWVLS*PPEGWS
Trigger: ACTCCACCCCTCTGGAGGCCATGAAAGGACCCAGGG...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAGTGGCCAGATAATCTaGGGCCTCAGTGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSSGQII*GLSACV
Trigger: AACACAGGCACTGAGGCCCCAGATTATCTGGCCACT...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAATGACCTGGCAATACTaGGGAGACTTGGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: SWCLQELMEKQHSEQQATMTWQY*GDLGST
Trigger: TGTTGACCCCAAGTCTCCCCAGTATTGCCAGGTCAT...TGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAAAGCCGGTGGATGACCTaGCAATACTGGGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: QELMEKQHSEQQATVVSKSRWMT*QYWGDL
Trigger: CAAGTCTCCCCAGTATTGCCAGGTCATCCACCGGCT...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAATGGGCAGCACCAGCTTaGTGCGCGACTTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: FISWCLQELMEKQHSEQQWAAPA*CATWCY
Trigger: ATAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCA...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTAGGCCAGTTCGCACTTaGCATGGATGTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ELMEKQHSEQQATVVSKCRPVRT*HGCPWA
Trigger: AGCCCAAGGACATCCATGCCAAGTGCGAACTGGCCT...ACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACAGGCAGTGGCTGGTGTaGAGAAAGGCCAGTTCGCAC +
Preference number: 4 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYRQWLV*RKASSH
Trigger: GTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGCCAGGCAGTGGCTaGTGTGGAGAAAGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVWPGSG*CGERPV
Trigger: AACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCA...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTGGCCAGGCAGTGGCTaGTGTGGAGAAAGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWWPGSG*CGERPV
Trigger: AACTGGCCTTTCTCCACACCAGCCACTGCCTGGCCA...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGTCATCACTTCCCCGCTaGCCAGGCAGTGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLSSLPR*PGSGWC
Trigger: ACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGA...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCACATCTCGTAAGACATTaGGAGCTGCCCACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: ISWCLQELMEKQHSEQQAHLVRH*ELPTQC
Trigger: GCACTGAGTGGGCAGCTCCCAATGTCTTACGAGATG...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CCA 90 bp CGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTATCCCATACATATAAGTaGCTCCCGTACAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RSPPGSWGSTSALLLLCLSHTYK*LPYSPA
Trigger: GGCTGGACTGTACGGGAGCCACTTATATGTATGGGA...TAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp GTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGGAGGCGGGGTCTCTGTaGGTCAGAGATGTCATACTG +
Preference number: 4 (lower is better)
Translates to: VTSLFLGASKSSWKSSTVEAGSL*VRDVIL
Trigger: CAGTATGACATCTCTGACCCACAGAGACCCCGCCTC...CACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTACTAGGGGCTCTGGCTaGGACTTTAGTTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: ELMEKQHSEQQATVVSKCTRGSG*DFSSSS
Trigger: GGACGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGT...ACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATAGTCCACCAGGAAGTTaGGGTTCAACTTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VGVQLQPSFYCVYINLQHSPPGS*GSTSAL
Trigger: GAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACT...ATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp AGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCAAGTCCACCAGGAAGTTaGGGTTCAACTTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SWGSTSALLLLCLHQPAASPPGS*GSTSAL
Trigger: GAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACT...TGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp ACAGGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCAGCCACAGTCTCAGCTTaGCTGTGTGGTACATGCTGC +
Preference number: 4 (lower is better)
Translates to: TGLRVYFLVPPRAHGKAAATVSA*LCGTCC
Trigger: GCAGCATGTACCACACAGCCAAGCTGAGACTGTGGC...TGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CCA 90 bp AGGGGCTCCTTCCCGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTAGCAACAAGCAACAGTaGTCAGTAAATGTATATGAC +
Preference number: 4 (lower is better)
Translates to: RGSFPKSTRKLGFNFSPPSNKQQ*SVNVYD
Trigger: GTCATATACATTTACTGACCACTGTTGCTTGTTGCT...AGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp CTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTTTGGGCTCAATGACCTaGCAATACTGGGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: LQELMEKQHSEQQATVVSLGSMT*QYWGDL
Trigger: CAAGTCTCCCCAGTATTGCCAGGTCATTGAGCCCAA...ACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447402.7
CDS-3UTR TCA 90 bp GTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGCCACATCAGCGGGGTTaGAGCCATCTCGTAAGACAT +
Preference number: 4 (lower is better)
Translates to: VTSLFLGASKSSWKSSTVPHQRG*SHLVRH
Trigger: ATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGG...CACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR TCA 90 bp AACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCCCACCCGTTTTCCCTTaGCCACTAGGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NKQQWSVNVYDSTHCHSLPPVFP*PLGALA
Trigger: AGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGG...GAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATGCTTCCCATCCAGGCTaGGCTGGATCATCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHASHPG*AGSSEG
Trigger: GCCCTCAGATGATCCAGCTCAGCCTGGATGGGAAGC...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp GGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGGGGTCAGTAAATGTATATaGCTCAACACATTGCCACAG +
Preference number: 4 (lower is better)
Translates to: GDEGGVQIQMSELQSPPGVSKCI*LNTLPQ
Trigger: CTGTGGCAATGTGTTGAGTCATATACATTTACTGAC...CCCTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGCACCGAAGCAGCTGCTaGAGGTGTTCCATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVHRSSC*RCSILS
Trigger: ACTCAGGATGGAACACCTGCAGCAGCTGCTTCGGTG...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGTATCACCGAAGCAGCTaGTGCAGGTGTTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: VTSLFLGASKSSWKSSTVYHRSS*CRCSIL
Trigger: CAGGATGGAACACCTGCAGCAGCTGCTTCGGTGATA...CACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGTGGTGCGCGACTTGGTaGTATCACCGAAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLWCATW*YHRSSC
Trigger: GCAGCTGCTTCGGTGATAGCACCAAGTCGCGCACCA...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATGTCATAGCCCAACGGTaGAGCACCCCCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHVIAQR*STPRSL
Trigger: GAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGAC...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR GCA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTTTAGAGACAGGGTCTaGACAATCTCATGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQFRDRV*TISWRC
Trigger: GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAA...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCAGCGTCTGGGTTGTaGAGGAAGCGGATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLAASGL*RKRISK
Trigger: CTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGC...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp TCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAGTGTCTACATCAACCTaGAGCATCACAGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: STRKLGFNFSPPFTVSTSVSTST*SITEPS
Trigger: GGAAGGCTCTGTGATGCTGCAGGTTGATGTAGACAC...TGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTGGCTGTGTGGTACATaGTGCCAAGGGTCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHWLCGT*CQGSGA
Trigger: GGCACCCGACCCTTGGCAGCATGTACCACACAGCCA...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCATATGACTCAACACATTaGCACAGTCTCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSYDSTH*HSLSLA
Trigger: AGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATA...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGAGGAGGGTGAGGTTGTaGTGGGAAGAGCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVRRVRL*WEELET
Trigger: TGTCTCCAGCTCTTCCCAGCACAACCTCACCCTCCT...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS-3UTR CCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATGCGGGTTTGCTGTGCTaGTGTCAGAGGCCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHAGLLC*CQRPLF
Trigger: GAACAGCGGCCTCTGACACCAGCACAGCAAACCCGC...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368868.10
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CCA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAAAGTGGCCAGATAATCTaGGGCCTCAGTGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: QELMEKQHSEQQATVVSKSGQII*GLSACV
Trigger: AACACAGGCACTGAGGCCCCAGATTATCTGGCCACT...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTAGTGGCCAGATAATCTaGGGCCTCAGTGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: ELMEKQHSEQQATVVSKCSGQII*GLSACV
Trigger: AACACAGGCACTGAGGCCCCAGATTATCTGGCCACT...ACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGGGTCAACATCCACAGTaGCCAGATAATCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VTSLFLGASKSSWKSSTVGQHPQ*PDNLGP
Trigger: AGGCCCCAGATTATCTGGCCACTGTGGATGTTGACC...CACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCCAGTCCCATACATATATGACCTGGCAATACTaGGGAGACTTGGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: SFRDRVCTISWRCQSHTYMTWQY*GDLGST
Trigger: TGTTGACCCCAAGTCTCCCCAGTATTGCCAGGTCAT...ATATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATGGCATGGGCAGCCGGTaGATGACCTGGCAATACTGG +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHGMGSR*MTWQYW
Trigger: CCAGTATTGCCAGGTCATCCACCGGCTGCCCATGCC...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CCA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACAGGCCAGTTCGCACTTaGCATGGATGTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYRPVRT*HGCPWA
Trigger: AGCCCAAGGACATCCATGCCAAGTGCGAACTGGCCT...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAAGGCCAGTTCGCACTTaGCATGGATGTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: FISWCLQELMEKQHSEQQRPVRT*HGCPWA
Trigger: AGCCCAAGGACATCCATGCCAAGTGCGAACTGGCCT...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTCCCATACATATAAGTaGCTCCCGTACAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQSHTYK*LPYSPA
Trigger: GGCTGGACTGTACGGGAGCCACTTATATGTATGGGA...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATGTCGGTGATCAGGCCTaGCATTTCGGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHVGDQA*HFGQQP
Trigger: TGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGAC...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAACTCAGCTTGGCTGTGTaGTACATGCTGCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: FISWCLQELMEKQHSEQQLSLAV*YMLPRV
Trigger: GACCCTTGGCAGCATGTACCACACAGCCAAGCTGAG...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGCTCAGCTTGGCTGTGTaGTACATGCTGCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVLSLAV*YMLPRV
Trigger: GACCCTTGGCAGCATGTACCACACAGCCAAGCTGAG...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGAGCAACAAGCAACAGTaGTCAGTAAATGTATATGAC +
Preference number: 4 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKSNKQQ*SVNVYD
Trigger: GTCATATACATTTACTGACCACTGTTGCTTGTTGCT...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGACCCATGCTGCCGACTaGTACACTTTGATCCCGGCG +
Preference number: 4 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLTHAAD*YTLIPA
Trigger: CGCCGGGATCAAAGTGTACCAGTCGGCAGCATGGGT...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS-3UTR TCA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGCCACATCAGCGGGGTTaGAGCCATCTCGTAAGACAT +
Preference number: 4 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVPHQRG*SHLVRH
Trigger: ATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGG...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR GCA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAAAATCTGGGGCCTCAGTaGCTGTGTTTCGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: EFISWCLQELMEKQHSEQNLGPQ*LCFGKC
Trigger: GCATTTACCGAAACACAGGCACTGAGGCCCCAGATT...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp TCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAACAATCTCATGGCGCTaGCAGTCCCATACATATAAG +
Preference number: 4 (lower is better)
Translates to: SWCLQELMEKQHSEQQATTISWR*QSHTYK
Trigger: CTTATATGTATGGGACTGGCAGCGCCATGAGATTGT...TGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATTTAGAGACAGGGTCTaGACAATCTCATGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: QELMEKQHSEQQATVVSKFRDRV*TISWRC
Trigger: GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAA...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATGCAGCGTCTGGGTTGTaGAGGAAGCGGATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHAASGL*RKRISK
Trigger: CTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGC...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATGATGGTGGAGCTGAGTaGGCAGCCCACAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHDGGAE*AAHKAL
Trigger: CAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATC...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTCAGAGATGTCATACTaGCTCAGGTCCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWSEMSY*LRSPCS
Trigger: GCTGCATGGGGACCTGAGGCAGTATGACATCTCTGA...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGGGTCAACATCCACAGTaGCCAGATAATCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWGQHPQ*PDNLGP
Trigger: AGGCCCCAGATTATCTGGCCACTGTGGATGTTGACC...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACGGTCAACATCCACAGTaGCCAGATAATCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYGQHPQ*PDNLGP
Trigger: AGGCCCCAGATTATCTGGCCACTGTGGATGTTGACC...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATGACCTGGCAATACTaGGGAGACTTGGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: ELMEKQHSEQQATVVSKCMTWQY*GDLGST
Trigger: TGTTGACCCCAAGTCTCCCCAGTATTGCCAGGTCAT...ACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGCATCTCGTAAGACATTaGGAGCTGCCCACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWHLVRH*ELPTQC
Trigger: GCACTGAGTGGGCAGCTCCCAATGTCTTACGAGATG...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CCA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCATACGAGTTTATTTCTTaGTGCCTCCAAGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSYEFIS*CLQELM
Trigger: CATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTA...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATGTGTTCCATCCTGAGTaGTGCAGCTCGTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHVFHPE*CSSSFR
Trigger: CCTGAAGGACGAGCTGCATCACTCAGGATGGAACAC...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGACAATCTCATGGCGCTaGCAGTCCCATACATATAAG +
Preference number: 4 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQTISWR*QSHTYK
Trigger: CTTATATGTATGGGACTGGCAGCGCCATGAGATTGT...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCACAATCTCATGGCGCTaGCAGTCCCATACATATAAG +
Preference number: 4 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSTISWR*QSHTYK
Trigger: CTTATATGTATGGGACTGGCAGCGCCATGAGATTGT...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACGAGACACATGACCCATaGTGCCGACTGGTACACTTT +
Preference number: 4 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYETHDP*CRLVHF
Trigger: AAAGTGTACCAGTCGGCAGCATGGGTCATGTGTCTC...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS-3UTR CCA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAATGACCTGGCAATACTaGGGAGACTTGGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: FISWCLQELMEKQHSEQQMTWQY*GDLGST
Trigger: TGTTGACCCCAAGTCTCCCCAGTATTGCCAGGTCAT...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAATCCCATACATATAAGTaGCTCCCGTACAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: FISWCLQELMEKQHSEQQSHTYK*LPYSPA
Trigger: GGCTGGACTGTACGGGAGCCACTTATATGTATGGGA...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR TCA 90 bp AACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCCCACATCAGCGGGGTTaGAGCCATCTCGTAAGACAT +
Preference number: 4 (lower is better)
Translates to: NKQQWSVNVYDSTHCHSLPHQRG*SHLVRH
Trigger: ATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGG...GAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR TCA 90 bp AACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCGATCACCTTCTCCACTaGCCATGTACCTCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: NKQQWSVNVYDSTHCHSLDHLLH*PCTSLV
Trigger: AACGAGGGAGGTACATGGTCAGTGGAGAAGGTGATC...GAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp CATCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCCAGTCCCATACATGTCAGTAAATGTATATaGCTCAACACATTGCCACAG +
Preference number: 4 (lower is better)
Translates to: HLLETGSAQSHGAASPIHVSKCI*LNTLPQ
Trigger: CTGTGGCAATGTGTTGAGTCATATACATTTACTGAC...ATGTATGGGACTGGCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGAATCTGGGGCCTCAGTaGCTGTGTTTCGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLNLGPQ*LCFGKC
Trigger: GCATTTACCGAAACACAGGCACTGAGGCCCCAGATT...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp AACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCTATCACCGAAGCAGCTaGTGCAGGTGTTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: NKQQWSVNVYDSTHCHSLYHRSS*CRCSIL
Trigger: CAGGATGGAACACCTGCAGCAGCTGCTTCGGTGATA...GAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAAACAATCTCATGGCGCTaGCAGTCCCATACATATAAG +
Preference number: 4 (lower is better)
Translates to: EFISWCLQELMEKQHSEQTISWR*QSHTYK
Trigger: CTTATATGTATGGGACTGGCAGCGCCATGAGATTGT...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTCAGAGATGTCATACTaGCTCAGGTCCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHSEMSY*LRSPCS
Trigger: GCTGCATGGGGACCTGAGGCAGTATGACATCTCTGA...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAATATGACTCAACACATTaGCACAGTCTCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: EFISWCLQELMEKQHSEQYDSTH*HSLSLA
Trigger: AGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATA...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp AACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGACGATCTCTTCCCTaGGTCCTTTCATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: NKQQWSVNVYDSTHCHSLRRSLP*VLSWPP
Trigger: TGGAGGCCATGAAAGGACCCAGGGAAGAGATCGTCT...GAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATGGTCAACATCCACAGTaGCCAGATAATCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHGQHPQ*PDNLGP
Trigger: AGGCCCCAGATTATCTGGCCACTGTGGATGTTGACC...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGATGACCTGGCAATACTaGGGAGACTTGGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLMTWQY*GDLGST
Trigger: TGTTGACCCCAAGTCTCCCCAGTATTGCCAGGTCAT...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGTCCCATACATATAAGTaGCTCCCGTACAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLSHTYK*LPYSPA
Trigger: GGCTGGACTGTACGGGAGCCACTTATATGTATGGGA...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATGTCTGCACAATCTCATaGCGCTGCCAGTCCCATACA +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHVCTIS*RCQSHT
Trigger: TGTATGGGACTGGCAGCGCCATGAGATTGTGCAGAC...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp AACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGTCCACCAGGAAGTTaGGGTTCAACTTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: NKQQWSVNVYDSTHCHSLSPPGS*GSTSAL
Trigger: GAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACT...GAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCAGCATCACATACGAGTTTATTTCTTaGTGCCTCCAAGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: GFNFSPPFTVSTSTCSITYEFIS*CLQELM
Trigger: CATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTA...TGTGATGCTGCAGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443708.5
ENST00000455397.5
CDS-3UTR TCA 90 bp CCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGTCAGTAAATGTATATaGCTCAACACATTGCCACAG +
Preference number: 4 (lower is better)
Translates to: PGSWGSTSALLLLCLHQPVSKCI*LNTLPQ
Trigger: CTGTGGCAATGTGTTGAGTCATATACATTTACTGAC...AGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR GCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATAATCTGGGGCCTCAGTaGCTGTGTTTCGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHNLGPQ*LCFGKC
Trigger: GCATTTACCGAAACACAGGCACTGAGGCCCCAGATT...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATGTGTCTACATCAACCTaGAGCATCACAGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHVSTST*SITEPS
Trigger: GGAAGGCTCTGTGATGCTGCAGGTTGATGTAGACAC...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAATATGACTCAACACATTaGCACAGTCTCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FISWCLQELMEKQHSEQQYDSTH*HSLSLA
Trigger: AGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATA...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTATGACTCAACACATTaGCACAGTCTCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVYDSTH*HSLSLA
Trigger: AGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATA...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAAGAGTTTATTTCTTGGTaGCTCCAAGAGCTCATGGAA +
Preference number: 4 (lower is better)
Translates to: EFISWCLQELMEKQHSEQEFISW*LQELME
Trigger: TTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp GTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGGAGTTTATTTCTTGGTaGCTCCAAGAGCTCATGGAA +
Preference number: 4 (lower is better)
Translates to: VTSLFLGASKSSWKSSTVEFISW*LQELME
Trigger: TTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC...CACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTCCCATACATATAAGTaGCTCCCGTACAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHSHTYK*LPYSPA
Trigger: GGCTGGACTGTACGGGAGCCACTTATATGTATGGGA...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR TCA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAAGTCAGTAAATGTATATaGCTCAACACATTGCCACAG +
Preference number: 4 (lower is better)
Translates to: EFISWCLQELMEKQHSEQVSKCI*LNTLPQ
Trigger: CTGTGGCAATGTGTTGAGTCATATACATTTACTGAC...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAGCAACAAGCAACAGTaGTCAGTAAATGTATATGAC +
Preference number: 4 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSSNKQQ*SVNVYD
Trigger: GTCATATACATTTACTGACCACTGTTGCTTGTTGCT...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR TCA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGGTCAGTAAATGTATATaGCTCAACACATTGCCACAG +
Preference number: 4 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWVSKCI*LNTLPQ
Trigger: CTGTGGCAATGTGTTGAGTCATATACATTTACTGAC...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR GCA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATGAGTTTATTTCTTGGTaGCTCCAAGAGCTCATGGAA +
Preference number: 4 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHEFISW*LQELME
Trigger: TTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGAGCAACAAGCAACAGTaGTCAGTAAATGTATATGAC +
Preference number: 4 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVSNKQQ*SVNVYD
Trigger: GTCATATACATTTACTGACCACTGTTGCTTGTTGCT...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CCA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACAGCAACAAGCAACAGTaGTCAGTAAATGTATATGAC +
Preference number: 4 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYSNKQQ*SVNVYD
Trigger: GTCATATACATTTACTGACCACTGTTGCTTGTTGCT...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS GCA 90 bp TGGCTGGGCCACGCTCTGGAGGGTGAAGGCTCCCTCCGCACGTTCTaGAGCACACATCCCAGCGGGCCACGGCAGTGCGGCTGGCCTAGG +
Preference number: 5 (lower is better)
Translates to: WLGHALEGEGSLRTF*STHPSGPRQCGWPR
Trigger: CCTAGGCCAGCCGCACTGCCGTGGCCCGCTGGGATGTGTGCTGCAGAACGTGCGGAGGGAGCCTTCACCCTCCAGAGCGTGGCCCAGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS CCA 90 bp CGCACGTTCTGCAGCACACATCCCAGCGGGCCACGGCAGTGCGGCTaGCCTAGGTCCCCACTCCAGCCTCATCGCTCTGGCCTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: RTFCSTHPSGPRQCG*PRSPLQPHRSGLSS
Trigger: AGAGGACAGGCCAGAGCGATGAGGCTGGAGTGGGGACCTAGGCCAGCCGCACTGCCGTGGCCCGCTGGGATGTGTGCTGCAGAACGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS TCA 90 bp CTGTGGAAGCAATGGGGCGCATTGGCTGGGCCACGCTCTGGAGGGTaGAGGCTCCCTCCGCACGTTCTGCAGCACACATCCCAGCGGGCC +
Preference number: 5 (lower is better)
Translates to: LWKQWGALAGPRSGG*RLPPHVLQHTSQRA
Trigger: GGCCCGCTGGGATGTGTGCTGCAGAACGTGCGGAGGGAGCCTTCACCCTCCAGAGCGTGGCCCAGCCAATGCGCCCCATTGCTTCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS TCA 90 bp AGTGATGCAGCTCGTCCTTCAGGTTGGGCATGGGCAGCCGGTGGATaGCCTAGGATGCGGGGAGAGGTGGTGCTCCCCCAGGCCACGCCT +
Preference number: 5 (lower is better)
Translates to: SDAARPSGWAWAAGG*PRMRGEVVLPQATP
Trigger: AGGCGTGGCCTGGGGGAGCACCACCTCTCCCCGCATCCTAGGTCATCCACCGGCTGCCCATGCCCAACCTGAAGGACGAGCTGCATCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463664.5
ENST00000470345.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
CDS-3UTR CAA 90 bp GCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGATGCCTTGTGCAGCTTaGGGGCCCGGGGCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: ALDVSQGADHHFPAGQAVMPCAA*GPGAQS
Trigger: GCTCTGAGCCCCGGGCCCCAAAGCTGCACAAGGCAT...CACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp CAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGGGCTGGGCCAATGGGCAGCGTCTGGGTaGTGCAGGAAGCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: QSYNRPQGSGAHGQGLGQWAASG*CRKRIS
Trigger: GGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCA...TTGGCCCAGCCCTTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS GCA 90 bp GCCTGTCCTCTCCGCCCCCTCAGAGCCCTGAGGAGGGTGAGGTTGTaGTGGGAAGAGCTGGAGACACATGACCCATGCTGCCGACTGGTA +
Preference number: 5 (lower is better)
Translates to: ACPLRPLRALRRVRL*WEELETHDPCCRLV
Trigger: TACCAGTCGGCAGCATGGGTCATGTGTCTCCAGCTCTTCCCAGCACAACCTCACCCTCCTCAGGGCTCTGAGGGGGCGGAGAGGACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS-3UTR CAA 90 bp GCCATTGCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGTGGGCAGCGTCTGGGTaGTGCAGGAAGCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: AIALDVSQGADHHFPAGQWAASG*CRKRIS
Trigger: GGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCA...CTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGCAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp AGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCGCCACCCGTTTTCCCTaGACCACTAGGGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: SAQPTKPWAASGLCRKRIATRFP*TTRGSG
Trigger: GCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC...GATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp GCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGGCCACCCGTTTTCCCTaGACCACTAGGGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: AHKALGSVWVVQEADLQGATRFP*TTRGSG
Trigger: GCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC...CCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS TCA 90 bp CCCGGGGCTCAGAGCCCACGTCCACCACATAGATGCGAGAGGAGATaGGACTGGGCAGCACCAGCTTGGTGCGCGACTTGGTGCTATCAC +
Preference number: 5 (lower is better)
Translates to: PGAQSPRPPHRCERR*DWAAPAWCATWCYH
Trigger: GTGATAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCAGTCTCATCTCCTCTCGCATCTATGTGGTGGACGTGGGCTCTGAGCCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
ENST00000458566.5
ENST00000463664.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
ENST00000498494.1
CDS GCA 90 bp GCTTGCCTGGCTGGAACCCCTCTCTCCTTTCAGACATGCTCTGCATaGCCATCCCTGGCCTGGACAGTCCTGGGCCTGTGCTGTCCCACA +
Preference number: 5 (lower is better)
Translates to: ACLAGTPLSFQTCSA*PSLAWTVLGLCCPT
Trigger: TGTGGGACAGCACAGGCCCAGGACTGTCCAGGCCAGGGATGGGCATGCAGAGCATGTCTGAAAGGAGAGAGGGGTTCCAGCCAGGCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS GCA 90 bp AGCAGCTTGCCTGGCTGGAACCCCTCTCTCCTTTCAGACATGCTCTaGATGCCCATCCCTGGCCTGGACAGTCCTGGGCCTGTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SSLPGWNPSLLSDML*MPIPGLDSPGPVLS
Trigger: GGACAGCACAGGCCCAGGACTGTCCAGGCCAGGGATGGGCATGCAGAGCATGTCTGAAAGGAGAGAGGGGTTCCAGCCAGGCAAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS GCA 90 bp GGAAGAGCAGCTTGCCTGGCTGGAACCCCTCTCTCCTTTCAGACATaGTCTGCATGCCCATCCCTGGCCTGGACAGTCCTGGGCCTGTGC +
Preference number: 5 (lower is better)
Translates to: GRAACLAGTPLSFQT*SACPSLAWTVLGLC
Trigger: GCACAGGCCCAGGACTGTCCAGGCCAGGGATGGGCATGCAGAGCATGTCTGAAAGGAGAGAGGGGTTCCAGCCAGGCAAGCTGCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS CCA 90 bp TGTCCTCTCCGCCCCCTCAGAGCCCTGAGGAGGGTGAGGTTGTGCTaGGAAGAGCTGGAGACACATGACCCATGCTGCCGACTGGTACAC +
Preference number: 5 (lower is better)
Translates to: CPLRPLRALRRVRLC*EELETHDPCCRLVH
Trigger: GTGTACCAGTCGGCAGCATGGGTCATGTGTCTCCAGCTCTTCCCAGCACAACCTCACCCTCCTCAGGGCTCTGAGGGGGCGGAGAGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS CCA 90 bp TTCGTAGCTGTGGAAGCAATGGGGCGCATTGGCTGGGCCACGCTCTaGAGGGTGAAGGCTCCCTCCGCACGTTCTGCAGCACACATCCCA +
Preference number: 5 (lower is better)
Translates to: FVAVEAMGRIGWATL*RVKAPSARSAAHIP
Trigger: TGGGATGTGTGCTGCAGAACGTGCGGAGGGAGCCTTCACCCTCCAGAGCGTGGCCCAGCCAATGCGCCCCATTGCTTCCACAGCTACGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS-3UTR CAA 90 bp CGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAGCCGACTGGTACACTTaGATCCCGGCGGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: RSPQSLGQRLGCAGSGSPADWYT*IPAGLL
Trigger: CAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGC...TGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp GAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTCCCGCCGACTGGTACACTTaGATCCCGGCGGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: EAGTRSHSPTVQHPQVSPADWYT*IPAGLL
Trigger: CAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGC...GGGAGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CAA 90 bp CAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGGGCTGGGCCAAAGCTTGGTGCGCGACTaGGTGCTATCACCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: QSYNRPQGSGAHGQGLGQSLVRD*VLSPKQ
Trigger: CTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGCT...TTGGCCCAGCCCTTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp GTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGGCTGGTGTGAGCTTGGTGCGCGACTaGGTGCTATCACCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: VSQGADHHFPAGQAVAGVSLVRD*VLSPKQ
Trigger: CTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGCT...CACACCAGCCACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
CDS-3UTR CAA 90 bp GTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTGGGCAGCACCAGCTaGGTGCGCGACTTGGTGCTA +
Preference number: 5 (lower is better)
Translates to: VSRLVPEVIAQRCSTPRSLGSTS*VRDLVL
Trigger: TAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCAG...AGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS TCA 90 bp GAAGCACGGCACAGGCTGGATTTCAGCACTCCCCTTGTCCCAGGTTaGGCGTGCACAAGCATCCCCAGGGAGGGCCAAGAAGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: EARHRLDFSTPLVPG*ACTSIPREGQEGWS
Trigger: GCTCCATCCTTCTTGGCCCTCCCTGGGGATGCTTGTGCACGCTCAACCTGGGACAAGGGGAGTGCTGAAATCCAGCCTGTGCCGTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463664.5
ENST00000470345.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
CDS CCA 90 bp TCCTCCTGCCAGGGTCTCCACCTGTCCTGTGAGGCGGGGTCTCTGTaGGTCAGAGATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: SSCQGLHLSCEAGSL*VRDVILPQVPMQPV
Trigger: AACTGGCTGCATGGGGACCTGAGGCAGTATGACATCTCTGACCCACAGAGACCCCGCCTCACAGGACAGGTGGAGACCCTGGCAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS-3UTR CAA 90 bp TCGGTGATCAGGCCTGGCATTTCGGGCAGCAGCCAGCCCTTCACTTTCTTGGGGTTGATCCCGGCGGGTTaGCTGTGCTGGTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: SVIRPGISGSSQPFTFLGLIPAG*LCWCQR
Trigger: CCTCTGACACCAGCACAGCAAACCCGCCGGGATCAA...CCCCAAGAAAGTGAAGGGCTGGCTGCTGCCCGAAATGCCAGGCCTGATCACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CAA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGAGCTCGTCCTTCAGGTaGGGCATGGGCAGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKSSSFR*GMGSRW
Trigger: CCACCGGCTGCCCATGCCCAACCTGAAGGACGAGCT...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp AGCTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAAAGCTCGTCCTTCAGGTaGGGCATGGGCAGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: SLAVWYMLPRVGCQERAESSSFR*GMGSRW
Trigger: CCACCGGCTGCCCATGCCCAACCTGAAGGACGAGCT...TTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp GCCATTGCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGAGCTTGGTGCGCGACTaGGTGCTATCACCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: AIALDVSQGADHHFPAGQSLVRD*VLSPKQ
Trigger: CTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGCT...CTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGCAATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
CDS-3UTR CAA 90 bp GCCACCCGTTTTCCCTTGACCACTAGGGGCTCTGGCTGGGACTTTAGTTCCTCGCTGGGCAGCACCAGCTaGGTGCGCGACTTGGTGCTA +
Preference number: 5 (lower is better)
Translates to: ATRFPLTTRGSGWDFSSSLGSTS*VRDLVL
Trigger: TAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCAG...CGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp GTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTTTGGGCTCAATGACCTaGTGCAGCTTTGGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: VSRLVPEVIAQRCSTPRSLGSMT*CSFGAR
Trigger: CCGGGCCCCAAAGCTGCACAAGGTCATTGAGCCCAA...AGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR CAA 90 bp GATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGGGCTGGAAACCCCCTTTGCCATaGCCCTTGACGTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: DVRATIAPRVAELMGKGWKPPLP*PLTSPR
Trigger: CCTGGGAGACGTCAAGGGCAATGGCAAAGGGGGTTT...CCAGCCCTTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CAA 90 bp AGGGGCTCCTTCCCGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTGGGCAGCGTCTGGGTaGTGCAGGAAGCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: RGSFPKSTRKLGFNFSPPWAASG*CRKRIS
Trigger: GGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCA...AGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCGGGAAGGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp CCCATGCAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATAAGCAATGGGGCGCATaGGCTGGGCCACGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: PMQPVAEVEEAVVQGEQDKQWGA*AGPRSG
Trigger: TCCAGAGCGTGGCCCAGCCAATGCGCCCCATTGCTT...ATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423070.5
CDS-3UTR CAA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGATGCCTTGTGCAGCTTaGGGGCCCGGGGCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMMPCAA*GPGAQS
Trigger: GCTCTGAGCCCCGGGCCCCAAAGCTGCACAAGGCAT...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS TCA 90 bp CGACTTGGTGCTATCACCGAAGCAGCTGCTGCAGGTGTTCCATCCTaGGTGATGCAGCTCGTCCTTCAGGTTGGGCATGGGCAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: RLGAITEAAAAGVPS*VMQLVLQVGHGQPV
Trigger: CACCGGCTGCCCATGCCCAACCTGAAGGACGAGCTGCATCACTCAGGATGGAACACCTGCAGCAGCTGCTTCGGTGATAGCACCAAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427867.2
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
ENST00000458566.5
ENST00000463664.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
ENST00000498494.1
CDS TCA 90 bp GGGCGTATGTCACCTCGTTCTTGTAGAAGCGCTGGATGGTGGAGCTaGGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: GRMSPRSCRSAGWWS*VRSPQSLGQRLGCA
Trigger: TGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAACGAGGTGACATACGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS TCA 90 bp CTTCCTTCCCTTCTGCTCCTCCTGCCAGGGTCTCCACCTGTCCTGTaGGGCGGGGTCTCTGTGGGTCAGAGATGTCATACTGCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: LPSLLLLLPGSPPVL*GGVSVGQRCHTASG
Trigger: ACCTGAGGCAGTATGACATCTCTGACCCACAGAGACCCCGCCTCACAGGACAGGTGGAGACCCTGGCAGGAGGAGCAGAAGGGAAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS GCA 90 bp GGGTTGCCCAGACCTGGGAGGGAGAGAATAGATGCCCGGCCTTCTTaGCAGCAGGATCTAACTCCATGCAAGCCCCTTGAGGCAGGGGTT +
Preference number: 5 (lower is better)
Translates to: GLPRPGRERIDARPS*QQDLTPCKPLEAGV
Trigger: AACCCCTGCCTCAAGGGGCTTGCATGGAGTTAGATCCTGCTGGCAAGAAGGCCGGGCATCTATTCTCTCCCTCCCAGGTCTGGGCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS GCA 90 bp ACATGCTCTGCATGCCCATCCCTGGCCTGGACAGTCCTGGGCCTGTaGTGTCCCACAGCACACATGTCTGCTTTTCCTGCACCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: TCSACPSLAWTVLGL*CPTAHMSAFPAPPS
Trigger: TGAGGGAGGTGCAGGAAAAGCAGACATGTGTGCTGTGGGACAGCACAGGCCCAGGACTGTCCAGGCCAGGGATGGGCATGCAGAGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS CCA 90 bp CAATTCCCACATTTCGTAGCTGTGGAAGCAATGGGGCGCATTGGCTaGGCCACGCTCTGGAGGGTGAAGGCTCCCTCCGCACGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: QFPHFVAVEAMGRIG*ATLWRVKAPSARSA
Trigger: TGCAGAACGTGCGGAGGGAGCCTTCACCCTCCAGAGCGTGGCCCAGCCAATGCGCCCCATTGCTTCCACAGCTACGAAATGTGGGAATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000424475.5
ENST00000426705.6
CDS CCA 90 bp TCCACAATTCCCACATTTCGTAGCTGTGGAAGCAATGGGGCGCATTaGCTGGGCCACGCTCTGGAGGGTGAAGGCTCCCTCCGCACGTTC +
Preference number: 5 (lower is better)
Translates to: STIPTFRSCGSNGAH*LGHALEGEGSLRTF
Trigger: GAACGTGCGGAGGGAGCCTTCACCCTCCAGAGCGTGGCCCAGCCAATGCGCCCCATTGCTTCCACAGCTACGAAATGTGGGAATTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000424475.5
ENST00000426705.6
CDS CCA 90 bp TGCCTGTGTTTCGGTAAATGCAGGGCAGGTAGACGATCTCTTCCCTaGGTCCTGCACGGTAGAAAGCAGGCAGCAGGGACGGCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: CLCFGKCRAGRRSLP*VLHGRKQAAGTAGW
Trigger: CCACCCTGCCGTCCCTGCTGCCTGCTTTCTACCGTGCAGGACCCAGGGAAGAGATCGTCTACCTGCCCTGCATTTACCGAAACACAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470345.5
ENST00000474352.5
CDS-3UTR CAA 90 bp TCCTCCAGCACTTGCACAGGGCCTCCCTTAACAATGCTGCCTCCGAGGAAGAGCGCCGACTGGTACACTTaGATCCCGGCGGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: SSSTCTGPPLTMLPPRKSADWYT*IPAGLL
Trigger: CAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGC...GCTCTTCCTCGGAGGCAGCATTGTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp TGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAAGCTCGTCCTTCAGGTaGGGCATGGGCAGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: WLCGTCCQGSGAKREQNESSSFR*GMGSRW
Trigger: CCACCGGCTGCCCATGCCCAACCTGAAGGACGAGCT...TTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp GCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGGTGCTGATCATGACATaGTGTCGAGGCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: ALDVSQGADHHFPAGQAVVLIMT*CRGWYQ
Trigger: CTGGTACCAGCCTCGACACAATGTCATGATCAGCAC...CACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CAA 90 bp AGCTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGGGCAGCGTCTGGGTaGTGCAGGAAGCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: SLAVWYMLPRVGCQERAEWAASG*CRKRIS
Trigger: GGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCA...TTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp CAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATGTCGGTCTCGTCCTCCAGCACTaGCACAGGGCCTCCCTTAAC +
Preference number: 5 (lower is better)
Translates to: QPVAEVEEAVVQGEQDVGLVLQH*HRASLN
Trigger: GTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGAG...ACCGACATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGGCCACCCGTTTTCCCTaGACCACTAGGGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKATRFP*TTRGSG
Trigger: GCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp TCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAGCTGCCCACTCAATGCCTTGTGCAGCTTaGGGGCCCGGGGCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: STSAGLKPSRKTLGAAHSMPCAA*GPGAQS
Trigger: GCTCTGAGCCCCGGGCCCCAAAGCTGCACAAGGCAT...TGAGTGGGCAGCTCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CAA 90 bp CTGTGGGTCAGAGATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAATGCCTTGTGCAGCTTaGGGGCCCGGGGCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: LWVRDVILPQVPMQPVAEMPCAA*GPGAQS
Trigger: GCTCTGAGCCCCGGGCCCCAAAGCTGCACAAGGCAT...TTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATCTCTGACCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS TCA 90 bp TTGGTGCTATCACCGAAGCAGCTGCTGCAGGTGTTCCATCCTGAGTaGTGCAGCTCGTCCTTCAGGTTGGGCATGGGCAGCCGGTGGATG +
Preference number: 5 (lower is better)
Translates to: LVLSPKQLLQVFHPE*CSSSFRLGMGSRWM
Trigger: CATCCACCGGCTGCCCATGCCCAACCTGAAGGACGAGCTGCATCACTCAGGATGGAACACCTGCAGCAGCTGCTTCGGTGATAGCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427867.2
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
ENST00000458566.5
ENST00000463664.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
ENST00000498494.1
CDS GCA 90 bp GCAGCACCAGCTTGGTGCGCGACTTGGTGCTATCACCGAAGCAGCTaGTGCAGGTGTTCCATCCTGAGTGATGCAGCTCGTCCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: AAPAWCATWCYHRSS*CRCSILSDAARPSG
Trigger: ACCTGAAGGACGAGCTGCATCACTCAGGATGGAACACCTGCAGCAGCTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGCTGGTGCTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427867.2
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
ENST00000458566.5
ENST00000463664.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
ENST00000498494.1
CDS-3UTR CAA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGTTGATCCCGGCGGGTTaGCTGTGCTGGTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMLIPAG*LCWCQR
Trigger: CCTCTGACACCAGCACAGCAAACCCGCCGGGATCAA...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGTTGATCCCGGCGGGTTaGCTGTGCTGGTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKLIPAG*LCWCQR
Trigger: CCTCTGACACCAGCACAGCAAACCCGCCGGGATCAA...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp GCCATTGCCCTTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGCAATACTGGGGAGACTaGGGGTCAACATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: AIALDVSQGADHHFPAGQQYWGD*GSTSTV
Trigger: CACTGTGGATGTTGACCCCAAGTCTCCCCAGTATTG...CTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGCAATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp TACAGTCCAGCCTCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAAGCTCGTCCTTCAGGTaGGGCATGGGCAGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: YSPASTSAGLKPSRKTLGSSSFR*GMGSRW
Trigger: CCACCGGCTGCCCATGCCCAACCTGAAGGACGAGCT...TCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CAA 90 bp GCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCAAGCTCGTCCTTCAGGTaGGGCATGGGCAGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: AAHSVLIMTLCRGWYQKSSSSFR*GMGSRW
Trigger: CCACCGGCTGCCCATGCCCAACCTGAAGGACGAGCT...TGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CAA 90 bp GGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGGGCTGGGCAGCACCAGCTaGGTGCGCGACTTGGTGCTA +
Preference number: 5 (lower is better)
Translates to: GDEGGVQIQMSELQSPPGLGSTS*VRDLVL
Trigger: TAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCAG...CCCTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp TTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGGCTGTTGGCATGGATGTCCTaGGGCTCAATGACCTTGTGC +
Preference number: 5 (lower is better)
Translates to: LTSPRELIITSPLARQWLLAWMS*GSMTLC
Trigger: GCACAAGGTCATTGAGCCCAAGGACATCCATGCCAA...CAGCCACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS-3UTR CAA 90 bp CCCATGCAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: PMQPVAEVEEAVVQGEQDKASSH*AWMSLG
Trigger: GCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTT...ATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGCCTTTGCCATTGCCCTaGACGTCTCCCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMPLPLP*TSPREL
Trigger: CAGCTCCCTGGGAGACGTCAAGGGCAATGGCAAAGG...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp CGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCATCCACATCAGCGGGGTaGAAGCCATCTCGTAAGACA +
Preference number: 5 (lower is better)
Translates to: RSPQSLGQRLGCAGSGSPSTSAG*KPSRKT
Trigger: TGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA...TGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CAA 90 bp TGTGGGTCAGAGATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAGTGGGCAGCGTCTGGGTaGTGCAGGAAGCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: CGSEMSYCLRSPCSQLLKWAASG*CRKRIS
Trigger: GGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCA...CTTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATCTCTGACCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp ATGGTGGAGCTGAGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAAGTCCACCAGGAAGTaGGGGTTCAACTTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: MVELSAQPTKPWAASGLCKSTRK*GFNFSP
Trigger: AGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTT...GCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp TTGACGTCTCCCAGGGAGCTGATCATCACTTCCCCGCTGGCCAGGCAGTGGCTGAAGTCCACCAGGAAGTaGGGGTTCAACTTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: LTSPRELIITSPLARQWLKSTRK*GFNFSP
Trigger: AGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTT...CAGCCACTGCCTGGCCAGCGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp GTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTTCTGTCTCTTTGCCATaGCCCTTGACGTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: VEAGTRSHSPTVQHPQVSSVSLP*PLTSPR
Trigger: CCTGGGAGACGTCAAGGGCAATGGCAAAGAGACAGA...AGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS TCA 90 bp CCACAATTCCCACATTTCGTAGCCATGCTGCCGACTGGTACACTTTaGTCCCGGCGGGTTTGCTGTGCTGGTGTCAGAGGCCGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: PQFPHFVAMLPTGTL*SRRVCCAGVRGRCS
Trigger: GGAACAGCGGCCTCTGACACCAGCACAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGCAGCATGGCTACGAAATGTGGGAATTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368868.10
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
CDS GCA 90 bp GTATGTCACCTCGTTCTTGTAGAAGCGCTGGATGGTGGAGCTGAGTaGGCAGCCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: VCHLVLVEALDGGAE*AAHKALGSVWVVQE
Trigger: TTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAACGAGGTGACATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS GCA 90 bp AGTCCTGGGCCTGTGCTGTCCCACAGCACACATGTCTGCTTTTCCTaGACCTCCCTCAACATCCTGCAGCTGCTTCAGATCATCCACCCC +
Preference number: 5 (lower is better)
Translates to: SPGPVLSHSTHVCFS*TSLNILQLLQIIHP
Trigger: GGGGTGGATGATCTGAAGCAGCTGCAGGATGTTGAGGGAGGTGCAGGAAAAGCAGACATGTGTGCTGTGGGACAGCACAGGCCCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS CCA 90 bp GCCAGGCAGTGGCTGGTGTGGAGAAAGGCCAGTTCGCACTTGGCATaGATGTCCTTGGGCTCAATGACCTGGCAATACTGGGGAGACTTG +
Preference number: 5 (lower is better)
Translates to: ARQWLVWRKASSHLA*MSLGSMTWQYWGDL
Trigger: CAAGTCTCCCCAGTATTGCCAGGTCATTGAGCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424475.5
ENST00000447402.7
CDS CCA 90 bp GAGGCGCCCTGTGGACTCATTTTGGTTTGGAAGCACGGCACAGGCTaGATTTCAGCACTCCCCTTGTCCCAGGTTGAGCGTGCACAAGCA +
Preference number: 5 (lower is better)
Translates to: EAPCGLILVWKHGTG*ISALPLSQVERAQA
Trigger: TGCTTGTGCACGCTCAACCTGGGACAAGGGGAGTGCTGAAATCCAGCCTGTGCCGTGCTTCCAAACCAAAATGAGTCCACAGGGCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463664.5
ENST00000470345.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
CDS CCA 90 bp TCTGAAGTCCCTCCACCCCCAGCTGTGGAATCAGTAGTAGGGCGCTaGCTCTCAGACCATGGGCAATTACCTTTCATGGCCTCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: SEVPPPPAVESVVGR*LSDHGQLPFMASRG
Trigger: CCCTCTGGAGGCCATGAAAGGTAATTGCCCATGGTCTGAGAGCCAGCGCCCTACTACTGATTCCACAGCTGGGGGTGGAGGGACTTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470345.5
ENST00000474352.5
CDS-3UTR CAA 90 bp GCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAGCCCCAATACTGGGGAGACTaGGGGTCAACATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: ALGSVWVVQEADLQGNKPQYWGD*GSTSTV
Trigger: CACTGTGGATGTTGACCCCAAGTCTCCCCAGTATTG...GGGCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp CAGTCCCATACATATAAGTGGCTCCCGTACAGTCCAGCCTCCACATCAGCGGGGAGCTTGGTGCGCGACTaGGTGCTATCACCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: QSHTYKWLPYSPASTSAGSLVRD*VLSPKQ
Trigger: CTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGCT...CCCCGCTGATGTGGAGGCTGGACTGTACGGGAGCCACTTATATGTATGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CAA 90 bp AAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAGCAGCTTGGTGCGCGACTaGGTGCTATCACCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: KPWAASGLCRKRISKGISSLVRD*VLSPKQ
Trigger: CTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGCT...GCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp TGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGCTGGGCAGCACCAGCTaGGTGCGCGACTTGGTGCTA +
Preference number: 5 (lower is better)
Translates to: WVMRVEFKSRCQSYNRPQLGSTS*VRDLVL
Trigger: TAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCAG...CTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp CCCACAAAGCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGATCCACATCAGCGGGGTaGAAGCCATCTCGTAAGACA +
Preference number: 5 (lower is better)
Translates to: PTKPWAASGLCRKRISKGSTSAG*KPSRKT
Trigger: TGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA...TCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGCTTTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CAA 90 bp GATGTCAGAGCTACAATCGCCCCCAGGGTAGCGGAGCTCATGGGCAAGGGCTGGTTGGCATGGATGTCCTaGGGCTCAATGACATGCCTT +
Preference number: 5 (lower is better)
Translates to: DVRATIAPRVAELMGKGWLAWMS*GSMTCL
Trigger: AAGGCATGTCATTGAGCCCAAGGACATCCATGCCAA...CCAGCCCTTGCCCATGAGCTCCGCTACCCTGGGGGCGATTGTAGCTCTGACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS GCA 90 bp CAGTGGCCAGATAATCTGGGGCCTCAGTGCCTGTGTTTCGGTAAATaGAGGGCAGGTAGACGATCTCTTCCCTGGGTCCTGCACGGTAGA +
Preference number: 5 (lower is better)
Translates to: QWPDNLGPQCLCFGK*RAGRRSLPWVLHGR
Trigger: TCTACCGTGCAGGACCCAGGGAAGAGATCGTCTACCTGCCCTGCATTTACCGAAACACAGGCACTGAGGCCCCAGATTATCTGGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470345.5
ENST00000474352.5
CDS-3UTR CAA 90 bp AGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGCTGGGCAGCACCAGCTaGGTGCGCGACTTGGTGCTA +
Preference number: 5 (lower is better)
Translates to: SADHDIVSRLVPEVIAQRLGSTS*VRDLVL
Trigger: TAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCAG...CCGTTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CAA 90 bp GATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAGTAGAGGAAGCGAAACCCCCTTTGCCATaGCCCTTGACGTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: DVILPQVPMQPVAEVEEAKPPLP*PLTSPR
Trigger: CCTGGGAGACGTCAAGGGCAATGGCAAAGGGGGTTT...CGCTTCCTCTACTTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000443708.5
CDS-3UTR CAA 90 bp GCCACCCGTTTTCCCTTGACCACTAGGGGCTCTGGCTGGGACTTTAGTTCCTCGAAGTCCACCAGGAAGTaGGGGTTCAACTTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: ATRFPLTTRGSGWDFSSSKSTRK*GFNFSP
Trigger: AGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTT...CGAGGAACTAAAGTCCCAGCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp GTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTGCAGCACCCCCAGGTCTCTTTGGCATGGATGTCCTaGGGCTCAATGACATGCCTT +
Preference number: 5 (lower is better)
Translates to: VEAGTRSHSPTVQHPQVSLAWMS*GSMTCL
Trigger: AAGGCATGTCATTGAGCCCAAGGACATCCATGCCAA...AGAGACCTGGGGGTGCTGCACCGTTGGGCTATGACTTCTGGTACCAGCCTCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CAA 90 bp GCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAGCCCTTGGCATGGATGTCCTaGGGCTCAATGACATGCCTT +
Preference number: 5 (lower is better)
Translates to: ALGSVWVVQEADLQGNKPLAWMS*GSMTCL
Trigger: AAGGCATGTCATTGAGCCCAAGGACATCCATGCCAA...GGGCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp TCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAGCTGCCCACTCATCTTTGCCATTGCCCTaGACGTCTCCCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: STSAGLKPSRKTLGAAHSSLPLP*TSPREL
Trigger: CAGCTCCCTGGGAGACGTCAAGGGCAATGGCAAAGA...TGAGTGGGCAGCTCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455839.5
CDS GCA 90 bp CAGTGGCCAGATAATCTGGGGCCTCAGTGCCTGTGTTTCGGTAAATaGAGGGCAGGTAGACGATCTCTTCCCTGGGTCCTTTCATGGCCT +
Preference number: 5 (lower is better)
Translates to: QWPDNLGPQCLCFGK*RAGRRSLPWVLSWP
Trigger: AGGCCATGAAAGGACCCAGGGAAGAGATCGTCTACCTGCCCTGCATTTACCGAAACACAGGCACTGAGGCCCCAGATTATCTGGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000424475.5
ENST00000426705.6
ENST00000427867.2
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
ENST00000463664.5
ENST00000473693.5
ENST00000492643.5
ENST00000493560.5
ENST00000498494.1
CDS GCA 90 bp GGAGGTGCAGAGTATAAGGAGGACCATAGTGGGAGGCGCAAACATTaGAGGAAGAGCAGCTTGCCTGGCTGGAACCCCTCTCTCCTTTCA +
Preference number: 5 (lower is better)
Translates to: GGAEYKEDHSGRRKH*RKSSLPGWNPSLLS
Trigger: TGAAAGGAGAGAGGGGTTCCAGCCAGGCAAGCTGCTCTTCCTGCAATGTTTGCGCCTCCCACTATGGTCCTCCTTATACTCTGCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS-3UTR CAA 90 bp ATGCAGCCAGTTGCTGAAGTAGAGGAAGCGGTCGTCCAGGGAGAGCAGGATGTCCAATACTGGGGAGACTaGGGGTCAACATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: MQPVAEVEEAVVQGEQDVQYWGD*GSTSTV
Trigger: CACTGTGGATGTTGACCCCAAGTCTCCCCAGTATTG...GACATCCTGCTCTCCCTGGACGACCGCTTCCTCTACTTCAGCAACTGGCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAGCTCGTCCTTCAGGTaGGGCATGGGCAGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSSSSFR*GMGSRW
Trigger: CCACCGGCTGCCCATGCCCAACCTGAAGGACGAGCT...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCATTGGGCTCAATGACCTaGTGCAGCTTTGGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSLGSMT*CSFGAR
Trigger: CCGGGCCCCAAAGCTGCACAAGGTCATTGAGCCCAA...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368868.10
ENST00000426705.6
CDS-3UTR CAA 90 bp GACATTGGGAGCTGCCCACTCAGTGCTGATCATGACATTGTGTCGAGGCTGGTAAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: DIGSCPLSADHDIVSRLVKASSH*AWMSLG
Trigger: GCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTT...TACCAGCCTCGACACAATGTCATGATCAGCACTGAGTGGGCAGCTCCCAATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CAA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGCCTTTGCCATTGCCCTaGACGTCTCCCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: WCLQELMEKQHSEQQATVPLPLP*TSPREL
Trigger: CAGCTCCCTGGGAGACGTCAAGGGCAATGGCAAAGG...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAGCACAAAACCCCCTTaGCCATTGCCCTTGACGTCT +
Preference number: 5 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMSTKPP*PLPLTS
Trigger: AGACGTCAAGGGCAATGGCAAAGGGGGTTTTGTGCT...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp GGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGAAGGTGCTGATCATGACATaGTGTCGAGGCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: GCVVHAAKGRVPRESRMKVLIMT*CRGWYQ
Trigger: CTGGTACCAGCCTCGACACAATGTCATGATCAGCAC...CTTCATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp TCGTCCTCCAGCATGCCTCAGGTCCCCATGCAGCCAGTTGCTGAAGTAGAGGAAGTGCTGATCATGACATaGTGTCGAGGCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: SSSSMPQVPMQPVAEVEEVLIMT*CRGWYQ
Trigger: CTGGTACCAGCCTCGACACAATGTCATGATCAGCAC...TTCCTCTACTTCAGCAACTGGCTGCATGGGGACCTGAGGCATGCTGGAGGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427977.6
CDS-3UTR CAA 90 bp CTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAATGTCCACATCAGCGGGGTaGAAGCCATCTCGTAAGACA +
Preference number: 5 (lower is better)
Translates to: LGCVVHAAKGRVPRESRMSTSAG*KPSRKT
Trigger: TGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA...CATTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp TCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACATGGGCAGCGTCTGGGTaGTGCAGGAAGCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: SWCLQELMEKQHSEQQATWAASG*CRKRIS
Trigger: GGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCA...TGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp GGGAGTGTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCTCGTCCTCCAGCACTaGCACAGGGCCTCCCTTAAC +
Preference number: 5 (lower is better)
Translates to: GSVGDEGGVQIQMSELQSLVLQH*HRASLN
Trigger: GTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGAG...CGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCACACTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp CTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTGCCACCCGTTTTCCCTaGACCACTAGGGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: LQELMEKQHSEQQATVVSATRFP*TTRGSG
Trigger: GCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC...ACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp AGCTTGGCTGTGTGGTACATGCTGCCAAGGGTCGGGTGCCAAGAGAGAGCAGAAAAGTCCACCAGGAAGTaGGGGTTCAACTTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: SLAVWYMLPRVGCQERAEKSTRK*GFNFSP
Trigger: AGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTT...TTCTGCTCTCTCTTGGCACCCGACCCTTGGCAGCATGTACCACACAGCCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp CTGTGGGTCAGAGATGTCATACTGCCTCAGGTCCCCATGCAGCCAGTTGCTGAACTCCCGTACAGTCCTTaGCCATTGCCCTTGACGTCT +
Preference number: 5 (lower is better)
Translates to: LWVRDVILPQVPMQPVAELPYSP*PLPLTS
Trigger: AGACGTCAAGGGCAATGGCAAAGGACTGTACGGGAG...TTCAGCAACTGGCTGCATGGGGACCTGAGGCAGTATGACATCTCTGACCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455397.5
CDS GCA 90 bp ACTTGGGGTCAACATCCACAGTGGCCAGATAATCTGGGGCCTCAGTaGCTGTGTTTCGGTAAATGCAGGGCAGGTAGACGATCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: TWGQHPQWPDNLGPQ*LCFGKCRAGRRSLP
Trigger: GGGAAGAGATCGTCTACCTGCCCTGCATTTACCGAAACACAGGCACTGAGGCCCCAGATTATCTGGCCACTGTGGATGTTGACCCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000424475.5
ENST00000426705.6
ENST00000427867.2
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
ENST00000463664.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
ENST00000498494.1
CDS CCA 90 bp ATACTGGGGAGACTTGGGGTCAACATCCACAGTGGCCAGATAATCTaGGGCCTCAGTGCCTGTGTTTCGGTAAATGCAGGGCAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: ILGRLGVNIHSGQII*GLSACVSVNAGQVD
Trigger: GTCTACCTGCCCTGCATTTACCGAAACACAGGCACTGAGGCCCCAGATTATCTGGCCACTGTGGATGTTGACCCCAAGTCTCCCCAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000424475.5
ENST00000426705.6
ENST00000427867.2
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
ENST00000463664.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
ENST00000498494.1
CDS-3UTR CAA 90 bp CTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTGCCGACTGGTACACTTaGATCCCGGCGGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LQELMEKQHSEQQATVVSADWYT*IPAGLL
Trigger: CAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGC...ACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp AAGGGAATAAGCCCATCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCGCCGACTGGTACACTTaGATCCCGGCGGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: KGISPSFRDRVCTISWRCADWYT*IPAGLL
Trigger: CAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGC...GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCTTATTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSKASSH*AWMSLG
Trigger: GCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTT...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp CGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACCTTTGCCATTGCCCTaGACGTCTCCCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RSPPGSWGSTSALLLLCLPLPLP*TSPREL
Trigger: CAGCTCCCTGGGAGACGTCAAGGGCAATGGCAAAGG...TAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGAAACCCCCTTTGCCATaGCCCTTGACGTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: WCLQELMEKQHSEQQATVKPPLP*PLTSPR
Trigger: CCTGGGAGACGTCAAGGGCAATGGCAAAGGGGGTTT...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp CCGTACAGTCCAGCCTCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGTCCACATCAGCGGGGTaGAAGCCATCTCGTAAGACA +
Preference number: 5 (lower is better)
Translates to: PYSPASTSAGLKPSRKTLSTSAG*KPSRKT
Trigger: TGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA...CAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
CDS-3UTR CAA 90 bp CGAAGTCCACCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACTCGTCCTCCAGCACTaGCACAGGGCCTCCCTTAAC +
Preference number: 5 (lower is better)
Translates to: RSPPGSWGSTSALLLLCLLVLQH*HRASLN
Trigger: GTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGAG...TAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCGCCACCCGTTTTCCCTaGACCACTAGGGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSATRFP*TTRGSG
Trigger: GCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGAAGCAATGGGGCGCATaGGCTGGGCCACGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQKQWGA*AGPRSG
Trigger: TCCAGAGCGTGGCCCAGCCAATGCGCCCCATTGCTT...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426705.6
CDS CCA 90 bp TGGATCACCTTCTCCACTGACCATGTACCTCCCTACATTGAGGGGTaGAGGGTGAGGTTAGCTGGCAGAGAGGTCAGCCTATCAGAATTG +
Preference number: 5 (lower is better)
Translates to: WITFSTDHVPPYIEG*RVRLAGREVSLSEL
Trigger: CAATTCTGATAGGCTGACCTCTCTGCCAGCTAACCTCACCCTCCACCCCTCAATGTAGGGAGGTACATGGTCAGTGGAGAAGGTGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS-3UTR CAA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCTTGATCCCGGCGGGTTaGCTGTGCTGGTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSLIPAG*LCWCQR
Trigger: CCTCTGACACCAGCACAGCAAACCCGCCGGGATCAA...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTTGATCCCGGCGGGTTaGCTGTGCTGGTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQLIPAG*LCWCQR
Trigger: CCTCTGACACCAGCACAGCAAACCCGCCGGGATCAA...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp ATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAGCCGACTGGTACACTTaGATCCCGGCGGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: ISWCLQELMEKQHSEQQAADWYT*IPAGLL
Trigger: CAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGC...TGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGGCCGACTGGTACACTTaGATCCCGGCGGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQADWYT*IPAGLL
Trigger: CAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGC...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp CCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTGCCGACTGGTACACTTaGATCCCGGCGGGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: PGSWGSTSALLLLCLHQPADWYT*IPAGLL
Trigger: CAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGC...AGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp TGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAGCAATACTGGGGAGACTaGGGGTCAACATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: WVMRVEFKSRCQSYNRPQQYWGD*GSTSTV
Trigger: CACTGTGGATGTTGACCCCAAGTCTCCCCAGTATTG...CTGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAAGCTCGTCCTTCAGGTaGGGCATGGGCAGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: FISWCLQELMEKQHSEQQSSSFR*GMGSRW
Trigger: CCACCGGCTGCCCATGCCCAACCTGAAGGACGAGCT...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAACTGGGCAGCACCAGCTaGGTGCGCGACTTGGTGCTA +
Preference number: 5 (lower is better)
Translates to: QELMEKQHSEQQATVVSKLGSTS*VRDLVL
Trigger: TAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCAG...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTTGGGCTCAATGACCTaGTGCAGCTTTGGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQLGSMT*CSFGAR
Trigger: CCGGGCCCCAAAGCTGCACAAGGTCATTGAGCCCAA...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368868.10
ENST00000426705.6
CDS-3UTR CAA 90 bp AAGGGAATAAGCCCATCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: KGISPSFRDRVCTISWRCKASSH*AWMSLG
Trigger: GCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTT...GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCTTATTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp TACAGTCCAGCCTCCACATCAGCGGGGTTGAAGCCATCTCGTAAGACATTGGGAAGCACAAAACCCCCTTaGCCATTGCCCTTGACGTCT +
Preference number: 5 (lower is better)
Translates to: YSPASTSAGLKPSRKTLGSTKPP*PLPLTS
Trigger: AGACGTCAAGGGCAATGGCAAAGGGGGTTTTGTGCT...TCCCAATGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGAGGCTGGACTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CAA 90 bp GTGGGTGATGAGGGTGGAGTTCAAATCCAGATGTCAGAGCTACAATCGCCCCCAAGCACAAAACCCCCTTaGCCATTGCCCTTGACGTCT +
Preference number: 5 (lower is better)
Translates to: VGDEGGVQIQMSELQSPPSTKPP*PLPLTS
Trigger: AGACGTCAAGGGCAATGGCAAAGGGGGTTTTGTGCT...TGGGGGCGATTGTAGCTCTGACATCTGGATTTGAACTCCACCCTCATCACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CAA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGTGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTG +
Preference number: 5 (lower is better)
Translates to: WCLQELMEKQHSEQQATVCHSLS*AVWYML
Trigger: CAGCATGTACCACACAGCCAAGCTGAGACTGTGGCA...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp GCCTTGGGCAGCGTCTGGGTTGTGCAGGAAGCGGATCTCCAAGGGAATAAGCCCTTACGAGTTTATTTCTaGGTGCCTCCAAGAGCTCAT +
Preference number: 5 (lower is better)
Translates to: ALGSVWVVQEADLQGNKPLRVYF*VPPRAH
Trigger: ATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAA...GGGCTTATTCCCTTGGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAGCTTGGTGCGCGACTaGGTGCTATCACCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSSLVRD*VLSPKQ
Trigger: CTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGCT...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGCTGGGCAGCACCAGCTaGGTGCGCGACTTGGTGCTA +
Preference number: 5 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWLGSTS*VRDLVL
Trigger: TAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCAG...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp ACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: TSLFLGASKSSWKSSTVSKASSH*AWMSLG
Trigger: GCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTT...GCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp TGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGAGCACAAAACCCCCTTaGCCATTGCCCTTGACGTCT +
Preference number: 5 (lower is better)
Translates to: WCLQELMEKQHSEQQATVSTKPP*PLPLTS
Trigger: AGACGTCAAGGGCAATGGCAAAGGGGGTTTTGTGCT...CACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTGGGCAGCGTCTGGGTaGTGCAGGAAGCGGATCTCC +
Preference number: 5 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWWAASG*CRKRIS
Trigger: GGAGATCCGCTTCCTGCACAACCCAGACGCTGCCCA...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGGCCACCCGTTTTCCCTaGACCACTAGGGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVATRFP*TTRGSG
Trigger: GCCAGAGCCCCTAGTGGTCAAGGGAAAACGGGTGGC...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp AAGGGAATAAGCCCATCTTTTAGAGACAGGGTCTGCACAATCTCATGGCGCTGCTGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTG +
Preference number: 5 (lower is better)
Translates to: KGISPSFRDRVCTISWRCCHSLS*AVWYML
Trigger: CAGCATGTACCACACAGCCAAGCTGAGACTGTGGCA...GCAGCGCCATGAGATTGTGCAGACCCTGTCTCTAAAAGATGGGCTTATTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAAAGCTTGGTGCGCGACTaGGTGCTATCACCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: EFISWCLQELMEKQHSEQSLVRD*VLSPKQ
Trigger: CTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGCT...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000455397.5
CDS-3UTR CAA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAAAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: QELMEKQHSEQQATVVSKKASSH*AWMSLG
Trigger: GCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTT...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGCCTTTGCCATTGCCCTaGACGTCTCCCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVPLPLP*TSPREL
Trigger: CAGCTCCCTGGGAGACGTCAAGGGCAATGGCAAAGG...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp ACAGGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCAAAACCCCCTTTGCCATaGCCCTTGACGTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: TGLRVYFLVPPRAHGKAAKPPLP*PLTSPR
Trigger: CCTGGGAGACGTCAAGGGCAATGGCAAAGGGGGTTT...TGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp TCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGCTGATCATGACATaGTGTCGAGGCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: SWCLQELMEKQHSEQQATVLIMT*CRGWYQ
Trigger: CTGGTACCAGCCTCGACACAATGTCATGATCAGCAC...TGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp TTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAACTCGTCCTCCAGCACTaGCACAGGGCCTCCCTTAAC +
Preference number: 5 (lower is better)
Translates to: FISWCLQELMEKQHSEQQLVLQH*HRASLN
Trigger: GTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGAG...TTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACCTCGTCCTCCAGCACTaGCACAGGGCCTCCCTTAAC +
Preference number: 5 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYLVLQH*HRASLN
Trigger: GTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGAG...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGCTCGTCCTCCAGCACTaGCACAGGGCCTCCCTTAAC +
Preference number: 5 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVLVLQH*HRASLN
Trigger: GTTAAGGGAGGCCCTGTGCAAGTGCTGGAGGACGAG...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp AGTGCTGATCATGACATTGTGTCGAGGCTGGTACCAGAAGTCATAGCCCAACGGTTGGCATGGATGTCCTaGGGCTCAATGACATGCCTT +
Preference number: 5 (lower is better)
Translates to: SADHDIVSRLVPEVIAQRLAWMS*GSMTCL
Trigger: AAGGCATGTCATTGAGCCCAAGGACATCCATGCCAA...CCGTTGGGCTATGACTTCTGGTACCAGCCTCGACACAATGTCATGATCAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
CDS-3UTR CAA 90 bp CCAGGAAGTTGGGGTTCAACTTCAGCCCTCCTTTTACTGTGTCTACATCAACCTTACAGTCCTTTGCCATaGCCCTTGACGTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: PGSWGSTSALLLLCLHQPYSPLP*PLTSPR
Trigger: CCTGGGAGACGTCAAGGGCAATGGCAAAGGACTGTA...AGGTTGATGTAGACACAGTAAAAGGAGGGCTGAAGTTGAACCCCAACTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455397.5
CDS-3UTR CAA 90 bp GGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGCAATACTGGGGAGACTaGGGGTCAACATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: GLRVYFLVPPRAHGKAAQQYWGD*GSTSTV
Trigger: CACTGTGGATGTTGACCCCAAGTCTCCCCAGTATTG...CTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWKASSH*AWMSLG
Trigger: GCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTT...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGAAACCCCCTTTGCCATaGCCCTTGACGTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWKPPLP*PLTSPR
Trigger: CCTGGGAGACGTCAAGGGCAATGGCAAAGGGGGTTT...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp ACAGGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCATGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTG +
Preference number: 5 (lower is better)
Translates to: TGLRVYFLVPPRAHGKAACHSLS*AVWYML
Trigger: CAGCATGTACCACACAGCCAAGCTGAGACTGTGGCA...TGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLKASSH*AWMSLG
Trigger: GCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTT...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAAAGCACAAAACCCCCTTaGCCATTGCCCTTGACGTCT +
Preference number: 5 (lower is better)
Translates to: QELMEKQHSEQQATVVSKSTKPP*PLPLTS
Trigger: AGACGTCAAGGGCAATGGCAAAGGGGGTTTTGTGCT...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp ACAGGGTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCAGTGCTGATCATGACATaGTGTCGAGGCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: TGLRVYFLVPPRAHGKAAVLIMT*CRGWYQ
Trigger: CTGGTACCAGCCTCGACACAATGTCATGATCAGCAC...TGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAACCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp CAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAAGTGCTGATCATGACATaGTGTCGAGGCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: QELMEKQHSEQQATVVSKVLIMT*CRGWYQ
Trigger: CTGGTACCAGCCTCGACACAATGTCATGATCAGCAC...TTTACTGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp GTTACGAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGTCCACATCAGCGGGGTaGAAGCCATCTCGTAAGACA +
Preference number: 5 (lower is better)
Translates to: VTSLFLGASKSSWKSSTVSTSAG*KPSRKT
Trigger: TGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA...CACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAATCCACATCAGCGGGGTaGAAGCCATCTCGTAAGACA +
Preference number: 5 (lower is better)
Translates to: EFISWCLQELMEKQHSEQSTSAG*KPSRKT
Trigger: TGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp TCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTG +
Preference number: 5 (lower is better)
Translates to: SVNVYDSTHCHSLSLAVWCHSLS*AVWYML
Trigger: CAGCATGTACCACACAGCCAAGCTGAGACTGTGGCA...CCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACTGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTG +
Preference number: 5 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYCHSLS*AVWYML
Trigger: CAGCATGTACCACACAGCCAAGCTGAGACTGTGGCA...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTG +
Preference number: 5 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVCHSLS*AVWYML
Trigger: CAGCATGTACCACACAGCCAAGCTGAGACTGTGGCA...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp GAGTTTATTTCTTGGTGCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAATTGGCATGGATGTCCTaGGGCTCAATGACCTGGCAA +
Preference number: 5 (lower is better)
Translates to: EFISWCLQELMEKQHSEQLAWMS*GSMTWQ
Trigger: TTGCCAGGTCATTGAGCCCAAGGACATCCATGCCAA...TTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGCACCAAGAAATAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447402.7
CDS-3UTR CAA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACCAATACTGGGGAGACTaGGGGTCAACATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYQYWGD*GSTSTV
Trigger: CACTGTGGATGTTGACCCCAAGTCTCCCCAGTATTG...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTTGGCATGGATGTCCTaGGGCTCAATGACCTTGTGC +
Preference number: 5 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVLAWMS*GSMTLC
Trigger: GCACAAGGTCATTGAGCCCAAGGACATCCATGCCAA...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368868.10
ENST00000426705.6
CDS-3UTR CAA 90 bp AACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAAACCCCCTTTGCCATaGCCCTTGACGTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: NKQQWSVNVYDSTHCHSLKPPLP*PLTSPR
Trigger: CCTGGGAGACGTCAAGGGCAATGGCAAAGGGGGTTT...GAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGGTGCTGATCATGACATaGTGTCGAGGCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVVLIMT*CRGWYQ
Trigger: CTGGTACCAGCCTCGACACAATGTCATGATCAGCAC...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp TGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGAAGTCCACCAGGAAGTaGGGGTTCAACTTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: WSVNVYDSTHCHSLSLAVKSTRK*GFNFSP
Trigger: AGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTT...CACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGTGCCACAGTCTCAGCTaGGCTGTGTGGTACATGCTG +
Preference number: 5 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLCHSLS*AVWYML
Trigger: CAGCATGTACCACACAGCCAAGCTGAGACTGTGGCA...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp GCCTCCAAGAGCTCATGGAAAAGCAGCACAGTGAGCAACAAGCAACAGTGGTCATTACGAGTTTATTTCTaGGTGCCTCCAAGAGCTCAT +
Preference number: 5 (lower is better)
Translates to: ASKSSWKSSTVSNKQQWSLRVYF*VPPRAH
Trigger: ATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAA...TGACCACTGTTGCTTGTTGCTCACTGTGCTGCTTTTCCATGAGCTCTTGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGCAATACTGGGGAGACTaGGGGTCAACATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLQYWGD*GSTSTV
Trigger: CACTGTGGATGTTGACCCCAAGTCTCCCCAGTATTG...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp CAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGTCCACATCAGCGGGGTaGAAGCCATCTCGTAAGACA +
Preference number: 5 (lower is better)
Translates to: QQWSVNVYDSTHCHSLSLSTSAG*KPSRKT
Trigger: TGTCTTACGAGATGGCTTCAACCCCGCTGATGTGGA...CAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
CDS-3UTR CAA 90 bp AACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCTTGGCATGGATGTCCTaGGGCTCAATGACCTTGTGC +
Preference number: 5 (lower is better)
Translates to: NKQQWSVNVYDSTHCHSLLAWMS*GSMTLC
Trigger: GCACAAGGTCATTGAGCCCAAGGACATCCATGCCAA...GAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368868.10
ENST00000426705.6
CDS-3UTR CAA 90 bp AGCACAGTGAGCAACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATAAGTCCACCAGGAAGTaGGGGTTCAACTTCAGCCCT +
Preference number: 5 (lower is better)
Translates to: STVSNKQQWSVNVYDSTHKSTRK*GFNFSP
Trigger: AGGGCTGAAGTTGAACCCCAACTTCCTGGTGGACTT...ATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTTGCTCACTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp GTAAATGTATATGACTCAACACATTGCCACAGTCTCAGCTTGGCTGTGTGGTACTTACGAGTTTATTTCTaGGTGCCTCCAAGAGCTCAT +
Preference number: 5 (lower is better)
Translates to: VNVYDSTHCHSLSLAVWYLRVYF*VPPRAH
Trigger: ATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAA...GTACCACACAGCCAAGCTGAGACTGTGGCAATGTGTTGAGTCATATACATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS-3UTR CAA 90 bp AACAAGCAACAGTGGTCAGTAAATGTATATGACTCAACACATTGCCACAGTCTCTTACGAGTTTATTTCTaGGTGCCTCCAAGAGCTCAT +
Preference number: 5 (lower is better)
Translates to: NKQQWSVNVYDSTHCHSLLRVYF*VPPRAH
Trigger: ATGAGCTCTTGGAGGCACCAAGAAATAAACTCGTAA...GAGACTGTGGCAATGTGTTGAGTCATATACATTTACTGACCACTGTTGCTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368868.10
ENST00000426705.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
CDS GCA 72 bp CACGCTCTGGAGGGTGAAGGCTCCCTCCGCACGTTCTaGAGCACACATCCCAGCGGGCCACGGCAGTGCGGC +
Preference number: 6 (lower is better)
Translates to: HALEGEGSLRTF*STHPSGPRQCG
Trigger: GCCGCACTGCCGTGGCCCGCTGGGATGTGTGCTGCAGAACGTGCGGAGGGAGCCTTCACCCTCCAGAGCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS TCA 72 bp GCTCGTCCTTCAGGTTGGGCATGGGCAGCCGGTGGATaGCCTAGGATGCGGGGAGAGGTGGTGCTCCCCCAG +
Preference number: 6 (lower is better)
Translates to: ARPSGWAWAAGG*PRMRGEVVLPQ
Trigger: CTGGGGGAGCACCACCTCTCCCCGCATCCTAGGTCATCCACCGGCTGCCCATGCCCAACCTGAAGGACGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463664.5
ENST00000470345.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
CDS TCA 72 bp CAATGGGGCGCATTGGCTGGGCCACGCTCTGGAGGGTaGAGGCTCCCTCCGCACGTTCTGCAGCACACATCC +
Preference number: 6 (lower is better)
Translates to: QWGALAGPRSGG*RLPPHVLQHTS
Trigger: GGATGTGTGCTGCAGAACGTGCGGAGGGAGCCTTCACCCTCCAGAGCGTGGCCCAGCCAATGCGCCCCATTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS CCA 72 bp GTGGAAGCAATGGGGCGCATTGGCTGGGCCACGCTCTaGAGGGTGAAGGCTCCCTCCGCACGTTCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: VEAMGRIGWATL*RVKAPSARSAA
Trigger: TGCTGCAGAACGTGCGGAGGGAGCCTTCACCCTCCAGAGCGTGGCCCAGCCAATGCGCCCCATTGCTTCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS CAA 90 bp CTGGCCTGTCCTCTCCGCCCCCTCAGAGCCCTGAGGAGGGTGAGGTaGTGCTGGGAAGAGCTGGAGACACATGACCCATGCTGCCGACTG +
Preference number: 6 (lower is better)
Translates to: LACPLRPLRALRRVR*CWEELETHDPCCRL
Trigger: CAGTCGGCAGCATGGGTCATGTGTCTCCAGCTCTTCCCAGCACAACCTCACCCTCCTCAGGGCTCTGAGGGGGCGGAGAGGACAGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS GCA 72 bp CTCCGCCCCCTCAGAGCCCTGAGGAGGGTGAGGTTGTaGTGGGAAGAGCTGGAGACACATGACCCATGCTGC +
Preference number: 6 (lower is better)
Translates to: LRPLRALRRVRL*WEELETHDPCC
Trigger: GCAGCATGGGTCATGTGTCTCCAGCTCTTCCCAGCACAACCTCACCCTCCTCAGGGCTCTGAGGGGGCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS CCA 72 bp CATTTCGTAGCTGTGGAAGCAATGGGGCGCATTGGCTaGGCCACGCTCTGGAGGGTGAAGGCTCCCTCCGCA +
Preference number: 6 (lower is better)
Translates to: HFVAVEAMGRIG*ATLWRVKAPSA
Trigger: TGCGGAGGGAGCCTTCACCCTCCAGAGCGTGGCCCAGCCAATGCGCCCCATTGCTTCCACAGCTACGAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000424475.5
ENST00000426705.6
CDS CCA 72 bp CCCACATTTCGTAGCTGTGGAAGCAATGGGGCGCATTaGCTGGGCCACGCTCTGGAGGGTGAAGGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: PTFRSCGSNGAH*LGHALEGEGSL
Trigger: GAGGGAGCCTTCACCCTCCAGAGCGTGGCCCAGCCAATGCGCCCCATTGCTTCCACAGCTACGAAATGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423070.5
ENST00000424475.5
ENST00000426705.6
CDS CCA 72 bp CAGGGTCTCCACCTGTCCTGTGAGGCGGGGTCTCTGTaGGTCAGAGATGTCATACTGCCTCAGGTCCCCATG +
Preference number: 6 (lower is better)
Translates to: QGLHLSCEAGSL*VRDVILPQVPM
Trigger: CATGGGGACCTGAGGCAGTATGACATCTCTGACCCACAGAGACCCCGCCTCACAGGACAGGTGGAGACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS CAA 72 bp GATGTCCTTGGGCTCAATGACATGCCTTGTGCAGCTTaGGGGCCCGGGGCTCAGAGCCCACGTCCACCACAT +
Preference number: 6 (lower is better)
Translates to: DVLGLNDMPCAA*GPGAQSPRPPH
Trigger: ATGTGGTGGACGTGGGCTCTGAGCCCCGGGCCCCAAAGCTGCACAAGGCATGTCATTGAGCCCAAGGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS CAA 72 bp TGGAAGCACGGCACAGGCTGGATTTCAGCACTCCCCTaGTCCCAGGTTGAGCGTGCACAAGCATCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: WKHGTGWISALP*SQVERAQASPG
Trigger: CCCTGGGGATGCTTGTGCACGCTCAACCTGGGACAAGGGGAGTGCTGAAATCCAGCCTGTGCCGTGCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463664.5
ENST00000470345.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
CDS TCA 72 bp CACAGGCTGGATTTCAGCACTCCCCTTGTCCCAGGTTaGGCGTGCACAAGCATCCCCAGGGAGGGCCAAGAA +
Preference number: 6 (lower is better)
Translates to: HRLDFSTPLVPG*ACTSIPREGQE
Trigger: TTCTTGGCCCTCCCTGGGGATGCTTGTGCACGCTCAACCTGGGACAAGGGGAGTGCTGAAATCCAGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463664.5
ENST00000470345.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
CDS TCA 72 bp TCACCTCGTTCTTGTAGAAGCGCTGGATGGTGGAGCTaGGTGCGCAGCCCACAAAGCCTTGGGCAGCGTCTG +
Preference number: 6 (lower is better)
Translates to: SPRSCRSAGWWS*VRSPQSLGQRL
Trigger: CAGACGCTGCCCAAGGCTTTGTGGGCTGCGCACTCAGCTCCACCATCCAGCGCTTCTACAAGAACGAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS CCA 72 bp GGGAAGAGCTGGAGACACATGACCCATGCTGCCGACTaGTACACTTTGATCCCGGCGGGTTTGCTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: GKSWRHMTHAAD*YTLIPAGLLCW
Trigger: CCAGCACAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGCAGCATGGGTCATGTGTCTCCAGCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423070.5
ENST00000426705.6
CDS CCA 72 bp ATGTCCTTGGGCTCAATGACATGCCTTGTGCAGCTTTaGGGCCCGGGGCTCAGAGCCCACGTCCACCACATA +
Preference number: 6 (lower is better)
Translates to: MSLGSMTCLVQL*GPGLRAHVHHI
Trigger: TATGTGGTGGACGTGGGCTCTGAGCCCCGGGCCCCAAAGCTGCACAAGGCATGTCATTGAGCCCAAGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS CCA 72 bp GGCGCTGGCTCTCAGACCATGGGCAATTACCTTTCATaGCCTCCAGAGGGGTGGAGTAGCCGGGTCCACAAT +
Preference number: 6 (lower is better)
Translates to: GAGSQTMGNYLS*PPEGWSSRVHN
Trigger: ATTGTGGACCCGGCTACTCCACCCCTCTGGAGGCCATGAAAGGTAATTGCCCATGGTCTGAGAGCCAGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470345.5
ENST00000474352.5
CDS CAA 72 bp GAGATGAGACTGGGCAGCACCAGCTTGGTGCGCGACTaGGTGCTATCACCGAAGCAGCTGCTGCAGGTGTTC +
Preference number: 6 (lower is better)
Translates to: EMRLGSTSLVRD*VLSPKQLLQVF
Trigger: GAACACCTGCAGCAGCTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGCTGGTGCTGCCCAGTCTCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
ENST00000458566.5
ENST00000463664.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
ENST00000498494.1
CDS CAA 72 bp AGGTGGTGCTCCCCCAGGCCACGCCTCTGTCCACTTTaGGAAGAGGCGCCCTGTGGACTCATTTTGGTTTGG +
Preference number: 6 (lower is better)
Translates to: RWCSPRPRLCPL*EEAPCGLILVW
Trigger: CCAAACCAAAATGAGTCCACAGGGCGCCTCTTCCAAAAGTGGACAGAGGCGTGGCCTGGGGGAGCACCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463664.5
ENST00000470345.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
CDS TCA 72 bp CCACATTTCGTAGCCATGCTGCCGACTGGTACACTTTaGTCCCGGCGGGTTTGCTGTGCTGGTGTCAGAGGC +
Preference number: 6 (lower is better)
Translates to: PHFVAMLPTGTL*SRRVCCAGVRG
Trigger: GCCTCTGACACCAGCACAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGCAGCATGGCTACGAAATGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368868.10
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455839.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
CDS TCA 72 bp GCTATCACCGAAGCAGCTGCTGCAGGTGTTCCATCCTaGGTGATGCAGCTCGTCCTTCAGGTTGGGCATGGG +
Preference number: 6 (lower is better)
Translates to: AITEAAAAGVPS*VMQLVLQVGHG
Trigger: CCCATGCCCAACCTGAAGGACGAGCTGCATCACTCAGGATGGAACACCTGCAGCAGCTGCTTCGGTGATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427867.2
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
ENST00000458566.5
ENST00000463664.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
ENST00000498494.1
CDS GCA 72 bp GCTTGGTGCGCGACTTGGTGCTATCACCGAAGCAGCTaGTGCAGGTGTTCCATCCTGAGTGATGCAGCTCGT +
Preference number: 6 (lower is better)
Translates to: AWCATWCYHRSS*CRCSILSDAAR
Trigger: ACGAGCTGCATCACTCAGGATGGAACACCTGCAGCAGCTGCTTCGGTGATAGCACCAAGTCGCGCACCAAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000426705.6
ENST00000427867.2
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
ENST00000455839.5
ENST00000458566.5
ENST00000463664.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
ENST00000498494.1
CDS CCA 72 bp CCTCCACCCCCAGCTGTGGAATCAGTAGTAGGGCGCTaGCTCTCAGACCATGGGCAATTACCTTTCATGGCC +
Preference number: 6 (lower is better)
Translates to: PPPPAVESVVGR*LSDHGQLPFMA
Trigger: GGCCATGAAAGGTAATTGCCCATGGTCTGAGAGCCAGCGCCCTACTACTGATTCCACAGCTGGGGGTGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470345.5
ENST00000474352.5
CDS CCA 72 bp TTCGGTAAATGCAGGGCAGGTAGACGATCTCTTCCCTaGGTCCTGCACGGTAGAAAGCAGGCAGCAGGGACG +
Preference number: 6 (lower is better)
Translates to: FGKCRAGRRSLP*VLHGRKQAAGT
Trigger: CGTCCCTGCTGCCTGCTTTCTACCGTGCAGGACCCAGGGAAGAGATCGTCTACCTGCCCTGCATTTACCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470345.5
ENST00000474352.5
CDS CAA 72 bp CCCACATTTCGTAGCCATGCTGCCGACTGGTACACTTaGATCCCGGCGGGTTTGCTGTGCTGGTGTCAGAGG +
Preference number: 6 (lower is better)
Translates to: PTFRSHAADWYT*IPAGLLCWCQR
Trigger: CCTCTGACACCAGCACAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGCAGCATGGCTACGAAATGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368868.10
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455839.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
CDS CAA 72 bp TGGAGACACATGACCCATGCTGCCGACTGGTACACTTaGATCCCGGCGGGTTTGCTGTGCTGGTGTCAGAGG +
Preference number: 6 (lower is better)
Translates to: WRHMTHAADWYT*IPAGLLCWCQR
Trigger: CCTCTGACACCAGCACAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGCAGCATGGGTCATGTGTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426705.6
CDS CAA 90 bp TCCACAATTCCCACATTTCGTAGCCATGCTGCCGACTGGTACACTTaGATCCCGGCGGGTTTGCTGTGCTGGTGTCAGAGGCCGCTGTTC +
Preference number: 6 (lower is better)
Translates to: STIPTFRSHAADWYT*IPAGLLCWCQRPLF
Trigger: GAACAGCGGCCTCTGACACCAGCACAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGCAGCATGGCTACGAAATGTGGGAATTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368868.10
ENST00000427977.6
ENST00000443708.5
ENST00000455839.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
CDS CAA 90 bp GAGAGGTCAGCCTATCAGAATTGGGGACTAGGGGTTAGATCTGGGTaGCCCAGACCTGGGAGGGAGAGAATAGATGCCCGGCCTTCTTGC +
Preference number: 6 (lower is better)
Translates to: ERSAYQNWGLGVRSG*PRPGRERIDARPSC
Trigger: GCAAGAAGGCCGGGCATCTATTCTCTCCCTCCCAGGTCTGGGCAACCCAGATCTAACCCCTAGTCCCCAATTCTGATAGGCTGACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS GCA 72 bp TTCCTGGAGACGCCTGGGAGCACCGTTACAGAAGCCTaGTTAGGTAGAGCTGCTGACAAGACTACTGGGAGG +
Preference number: 6 (lower is better)
Translates to: FLETPGSTVTEA*LGRAADKTTGR
Trigger: CCTCCCAGTAGTCTTGTCAGCAGCTCTACCTAAGCAGGCTTCTGTAACGGTGCTCCCAGGCGTCTCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS GCA 72 bp AGACCTGGGAGGGAGAGAATAGATGCCCGGCCTTCTTaGCAGCAGGATCTAACTCCATGCAAGCCCCTTGAG +
Preference number: 6 (lower is better)
Translates to: RPGRERIDARPS*QQDLTPCKPLE
Trigger: CTCAAGGGGCTTGCATGGAGTTAGATCCTGCTGGCAAGAAGGCCGGGCATCTATTCTCTCCCTCCCAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS GCA 72 bp ATCTGGGTTGCCCAGACCTGGGAGGGAGAGAATAGATaGCCGGCCTTCTTGCCAGCAGGATCTAACTCCATG +
Preference number: 6 (lower is better)
Translates to: IWVAQTWEGENR*PAFLPAGSNSM
Trigger: CATGGAGTTAGATCCTGCTGGCAAGAAGGCCGGGCATCTATTCTCTCCCTCCCAGGTCTGGGCAACCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS CCA 72 bp AGACTTGGGGTCAACATCCACAGTGGCCAGATAATCTaGGGCCTCAGTGCCTTTCATGGCCTCCAGAGGGGT +
Preference number: 6 (lower is better)
Translates to: RLGVNIHSGQII*GLSAFHGLQRG
Trigger: ACCCCTCTGGAGGCCATGAAAGGCACTGAGGCCCCAGATTATCTGGCCACTGTGGATGTTGACCCCAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458566.5
CDS CAA 72 bp AGGCAGTGGCTGGTGTGGAGAAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGCTCAATGACCTGGCAA +
Preference number: 6 (lower is better)
Translates to: RQWLVWRKASSH*AWMSLGSMTWQ
Trigger: TTGCCAGGTCATTGAGCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424475.5
ENST00000447402.7
CDS CAA 72 bp GGCAACAGAACGAGACTCCCATCTTTGCCATTGCCCTaGACGTCTCCCAGGGAGCTGATCATCACTTCCCCG +
Preference number: 6 (lower is better)
Translates to: GNRTRLPSLPLP*TSPRELIITSP
Trigger: CGGGGAAGTGATGATCAGCTCCCTGGGAGACGTCAAGGGCAATGGCAAAGATGGGAGTCTCGTTCTGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492643.5
ENST00000498494.1
CDS CAA 90 bp AAGGAGGACCATAGTGGGAGGCGCAAACATTGCAGGAAGAGCAGCTaGCCTGGCTGGAACCCCTCTCTCCTTTCAGACATGCTCTGCATG +
Preference number: 6 (lower is better)
Translates to: KEDHSGRRKHCRKSS*PGWNPSLLSDMLCM
Trigger: CATGCAGAGCATGTCTGAAAGGAGAGAGGGGTTCCAGCCAGGCAAGCTGCTCTTCCTGCAATGTTTGCGCCTCCCACTATGGTCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS GCA 72 bp GATAATCTGGGGCCTCAGTGCCTGTGTTTCGGTAAATaGAGGGCAGGTAGACGATCTCTTCCCTGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: DNLGPQCLCFGK*RAGRRSLPWVL
Trigger: CAGGACCCAGGGAAGAGATCGTCTACCTGCCCTGCATTTACCGAAACACAGGCACTGAGGCCCCAGATTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470345.5
ENST00000474352.5
CDS GCA 72 bp CCTGTGCTGTCCCACAGCACACATGTCTGCTTTTCCTaGACCTCCCTCAACATCCTGCAGCTGCTTCAGATC +
Preference number: 6 (lower is better)
Translates to: PVLSHSTHVCFS*TSLNILQLLQI
Trigger: GATCTGAAGCAGCTGCAGGATGTTGAGGGAGGTGCAGGAAAAGCAGACATGTGTGCTGTGGGACAGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS GCA 72 bp GAGTATAAGGAGGACCATAGTGGGAGGCGCAAACATTaGAGGAAGAGCAGCTTGCCTGGCTGGAACCCCTCT +
Preference number: 6 (lower is better)
Translates to: EYKEDHSGRRKH*RKSSLPGWNPS
Trigger: AGAGGGGTTCCAGCCAGGCAAGCTGCTCTTCCTGCAATGTTTGCGCCTCCCACTATGGTCCTCCTTATACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS CCA 72 bp TCCACAATTCCCACATTTCGTAGCCATGCTGCCGACTaGTACACTTTGATCCCGGCGGGTTTGCTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: STIPTFRSHAAD*YTLIPAGLLCW
Trigger: CCAGCACAGCAAACCCGCCGGGATCAAAGTGTACCAGTCGGCAGCATGGCTACGAAATGTGGGAATTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000368868.10
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
ENST00000455839.5
ENST00000463664.5
ENST00000470345.5
ENST00000473693.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
ENST00000498494.1
CDS CCA 72 bp CTTTTGGAAGAGGCGCCCTGTGGACTCATTTTGGTTTaGAAGCACGGCACAGGCTGGATTTCAGCACTCCCC +
Preference number: 6 (lower is better)
Translates to: LLEEAPCGLILV*KHGTGWISALP
Trigger: GGGGAGTGCTGAAATCCAGCCTGTGCCGTGCTTCCAAACCAAAATGAGTCCACAGGGCGCCTCTTCCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463664.5
ENST00000470345.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5
CDS CCA 72 bp TTCTCCACTGACCATGTACCTCCCTACATTGAGGGGTaGAGGGTGAGGTTAGCTGGCAGAGAGGTCAGCCTA +
Preference number: 6 (lower is better)
Translates to: FSTDHVPPYIEG*RVRLAGREVSL
Trigger: TAGGCTGACCTCTCTGCCAGCTAACCTCACCCTCCACCCCTCAATGTAGGGAGGTACATGGTCAGTGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS CCA 72 bp AGGCGCAAACATTGCAGGAAGAGCAGCTTGCCTGGCTaGAACCCCTCTCTCCTTTCAGACATGCTCTGCATG +
Preference number: 6 (lower is better)
Translates to: RRKHCRKSSLPG*NPSLLSDMLCM
Trigger: CATGCAGAGCATGTCTGAAAGGAGAGAGGGGTTCCAGCCAGGCAAGCTGCTCTTCCTGCAATGTTTGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474352.5
CDS CAA 72 bp AGGCAGTGGCTGGTGTGGAGAAAGGCCAGTTCGCACTaGGCATGGATGTCCTTGGGCTCAATGACATGCCTT +
Preference number: 6 (lower is better)
Translates to: RQWLVWRKASSH*AWMSLGSMTCL
Trigger: AAGGCATGTCATTGAGCCCAAGGACATCCATGCCAAGTGCGAACTGGCCTTTCTCCACACCAGCCACTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423070.5
ENST00000427977.6
ENST00000443708.5
ENST00000455397.5
CDS GCA 72 bp GATAATCTGGGGCCTCAGTGCCTGTGTTTCGGTAAATaGAGGGCAGGTAGACGATCTCTTCCCTGGGTCCTT +
Preference number: 6 (lower is better)
Translates to: DNLGPQCLCFGK*RAGRRSLPWVL
Trigger: AAGGACCCAGGGAAGAGATCGTCTACCTGCCCTGCATTTACCGAAACACAGGCACTGAGGCCCCAGATTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000368868.10
ENST00000423070.5
ENST00000424475.5
ENST00000426705.6
ENST00000427867.2
ENST00000427977.6
ENST00000443708.5
ENST00000447402.7
ENST00000455397.5
ENST00000463664.5
ENST00000473693.5
ENST00000492643.5
ENST00000493560.5
ENST00000498494.1
CDS CCA 72 bp TGTGGACTCATTTTGGTTTGGAAGCACGGCACAGGCTaGATTTCAGCACTCCCCTTGTCCCAGGTTGAGCGT +
Preference number: 6 (lower is better)
Translates to: CGLILVWKHGTG*ISALPLSQVER
Trigger: ACGCTCAACCTGGGACAAGGGGAGTGCTGAAATCCAGCCTGTGCCGTGCTTCCAAACCAAAATGAGTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463664.5
ENST00000470345.5
ENST00000474352.5
ENST00000492643.5
ENST00000493560.5