RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SELE (Homo sapiens)

Ensembl gene IDs: ENSG00000007908

Ensembl transcript IDs: ENST00000333360.12, ENST00000367774.1, ENST00000367775.5, ENST00000367776.5, ENST00000367777.5, ENST00000461085.1, ENST00000609271.1

Found 461 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTTTGATCTATTaGAGTGGTGATGGGTGTTGCGGTTTCAGCCATAAAGGCATCTGG +
Preference number: 1 (lower is better)
Translates to: SFQLKAVLACWTLIY*SGDGCCGFSHKGIW
Trigger: CCAGATGCCTTTATGGCTGAAACCGCAACACCCATCACCACTTCAATAGATCAAAGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR TCA 90 bp ATTCTCACACTCCTCAAGGCTAGAGCAGCTTTGGCAATTACTGACTaGGAATTTTTCATTGCCAGTGATCAACTGAAAACTGGAGATTCC +
Preference number: 1 (lower is better)
Translates to: ILTLLKARAALAITD*EFFIASDQLKTGDS
Trigger: GGAATCTCCAGTTTTCAGTTGATCACTGGCAATGAAAAATTCTCAGTCAGTAATTGCCAAAGCTGCTCTAGCCTTGAGGAGTGTGAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR TCA 90 bp TGCCAAGATTTTACAGCGAGCAAGGGAGAGTTAGAAAAGGAATTCTaGGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAA +
Preference number: 1 (lower is better)
Translates to: CQDFTASKGELEKEF*DFRVLVSSPLLGRK
Trigger: TTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGAATTCCTTTTCTAACTCTCCCTTGCTCGCTGTAAAATCTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR TCA 90 bp TTTAAAAGAACCTCTGCTGTTCTGATCCTTATCACATCTCTGTTTTaGCTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGAACTTCTCT +
Preference number: 1 (lower is better)
Translates to: FKRTSAVLILITSLF*LLALLLPVFSQNFS
Trigger: AGAGAAGTTCTGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGGATCAGAACAGCAGAGGTTCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAGTGGTGATGGGTGTTaGGGTTTCAGCCATAAAGGC +
Preference number: 2 (lower is better)
Translates to: RKGNTESFQLKAVLACWTSGDGC*GFSHKG
Trigger: GCCTTTATGGCTGAAACCGCAACACCCATCACCACT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAGCCATAAAGGCATCTaGCATAGTAGGCAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: RKGNTESFQLKAVLACWTSHKGI*HSRQEG
Trigger: CCCTTCTTGCCTACTATGCCAGATGCCTTTATGGCT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCTGAGTCTTTTCAGTTaGAGGCCGTCCTTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHLSLFS*RPSLPA
Trigger: AGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATAGTGGTGATGGGTGTTaGGGTTTCAGCCATAAAGGC +
Preference number: 2 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHSGDGC*GFSHKG
Trigger: GCCTTTATGGCTGAAACCGCAACACCCATCACCACT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAAGTGGTGATGGGTGTTaGGGTTTCAGCCATAAAGGC +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPSGDGC*GFSHKG
Trigger: GCCTTTATGGCTGAAACCGCAACACCCATCACCACT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATAGCCATAAAGGCATCTaGCATAGTAGGCAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHSHKGI*HSRQEG
Trigger: CCCTTCTTGCCTACTATGCCAGATGCCTTTATGGCT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR TCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGATCTATTGAAGTGGTaGTGGGTGTTGCGGTTTCAG +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPDLLKW*WVLRFQ
Trigger: CTGAAACCGCAACACCCATCACCACTTCAATAGATC...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAAACCCTCCATGCATTTaGCTGTGGGCATTCAACATC +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPNPPCI*LWAFNI
Trigger: GATGTTGAATGCCCACAGGCAAATGCATGGAGGGTT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR TCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGATCTATTGAAGTGGTaGTGGGTGTTGCGGTTTCAG +
Preference number: 2 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQDLLKW*WVLRFQ
Trigger: CTGAAACCGCAACACCCATCACCACTTCAATAGATC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR TCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCTGAGTCTTTTCAGTTaGAGGCCGTCCTTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLLSLFS*RPSLPA
Trigger: AGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCTGAGTCTTTTCAGTTaGAGGCCGTCCTTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: SEISESWSLHLCLEENILLSLFS*RPSLPA
Trigger: AGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGAACCCTCCATGCATTTaGCTGTGGGCATTCAACATC +
Preference number: 2 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQNPPCI*LWAFNI
Trigger: GATGTTGAATGCCCACAGGCAAATGCATGGAGGGTT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAATTAACAACCCTCCATaGATTTGCCTGTGGGCATTC +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPINNPP*ICLWAF
Trigger: GAATGCCCACAGGCAAATGCATGGAGGGTTGTTAAT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGAGATTTCAGAGTCTTaGTCTCTTCACCTTTGCTTG +
Preference number: 2 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHEISES*SLHLCL
Trigger: CAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGAGTGGTGATGGGTGTTaGGGTTTCAGCCATAAAGGC +
Preference number: 2 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLSGDGC*GFSHKG
Trigger: GCCTTTATGGCTGAAACCGCAACACCCATCACCACT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTGTTGAAGGCCGTCCTTaGCTGCTGGACTTTGATCTA +
Preference number: 2 (lower is better)
Translates to: SEISESWSLHLCLEENILVEGRP*LLDFDL
Trigger: TAGATCAAAGTCCAGCAGGCAAGGACGGCCTTCAAC...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGCATTCAGTAGGATTTaGACCATTAACAACCCTCCA +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPAFSRI*TINNPP
Trigger: TGGAGGGTTGTTAATGGTGCAAATCCTACTGAATGC...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGAGATTTCAGAGTCTTaGTCTCTTCACCTTTGCTTG +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPEISES*SLHLCL
Trigger: CAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTC...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAAGGCTAGAGCAGCTTTaGCAATTACTGACTGAGAAT +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPRLEQL*QLLTEN
Trigger: ATTCTCAGTCAGTAATTGCCAAAGCTGCTCTAGCCT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR TCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGGATCTATTGAAGTGGTaGTGGGTGTTGCGGTTTCAG +
Preference number: 2 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLDLLKW*WVLRFQ
Trigger: CTGAAACCGCAACACCCATCACCACTTCAATAGATC...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTGGTCTCTTCACCTTTaGTTGGAAGAAAATATCCTT +
Preference number: 2 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHWSLHL*LEENIL
Trigger: AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATAATATTGTGTTTCTGTaGCAAGATTTTACAGCGAGC +
Preference number: 2 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHNIVFL*QDFTAS
Trigger: GCTCGCTGTAAAATCTTGGCACAGAAACACAATATT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGAACCCTCCATGCATTTaGCTGTGGGCATTCAACATC +
Preference number: 2 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLNPPCI*LWAFNI
Trigger: GATGTTGAATGCCCACAGGCAAATGCATGGAGGGTT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTAGCCATAAAGGCATCTaGCATAGTAGGCAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: SEISESWSLHLCLEENILSHKGI*HSRQEG
Trigger: CCCTTCTTGCCTACTATGCCAGATGCCTTTATGGCT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAAAACGTTTGGCCTCATaGAAGTTTTTCATCGTGGAA +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPKRLAS*KFFIVE
Trigger: TTCCACGATGAAAAACTTCCATGAGGCCAAACGTTT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR TCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGTTGCCTGCTGGACTTTaGTCTATTGAAGTGGTGATG +
Preference number: 2 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLLPAGL*SIEVVM
Trigger: CATCACCACTTCAATAGATCAAAGTCCAGCAGGCAA...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTTTGCCTGCTGGACTTTaGTCTATTGAAGTGGTGATG +
Preference number: 2 (lower is better)
Translates to: SEISESWSLHLCLEENILLPAGL*SIEVVM
Trigger: CATCACCACTTCAATAGATCAAAGTCCAGCAGGCAA...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR TCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACTACCACACTTGTATTaGATGAAGAAGTATGGAAGA +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPLPHLY*MKKYGR
Trigger: TCTTCCATACTTCTTCATTCAATACAAGTGTGGTAG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR TCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATTGGCAATTACTGACTaGGAATTTTTCATTGCCAGT +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPLAITD*EFFIAS
Trigger: ACTGGCAATGAAAAATTCTCAGTCAGTAATTGCCAA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATGGTCTCTTCACCTTTaGTTGGAAGAAAATATCCTT +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPWSLHL*LEENIL
Trigger: AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAATAAACATAAATGCTTaGTCACACAGGCATTCCTCT +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPININA*SHRHSS
Trigger: AGAGGAATGCCTGTGTGAGCAAGCATTTATGTTTAT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCCATGCATTTGCCTGTaGGCATTCAACATCTGTCAT +
Preference number: 2 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLPCICL*AFNICH
Trigger: ATGACAGATGTTGAATGCCCACAGGCAAATGCATGG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACTCAGAACTTTATTCTaGTTAACATCATGCCTTGCT +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPLRTLF*LTSCLA
Trigger: AGCAAGGCATGATGTTAACCAGAATAAAGTTCTGAG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGTGGTCTCTTCACCTTTaGTTGGAAGAAAATATCCTT +
Preference number: 2 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQWSLHL*LEENIL
Trigger: AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCA...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGAATATTGTGTTTCTGTaGCAAGATTTTACAGCGAGC +
Preference number: 2 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQNIVFL*QDFTAS
Trigger: GCTCGCTGTAAAATCTTGGCACAGAAACACAATATT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGGCATTCAGTAGGATTTaGACCATTAACAACCCTCCA +
Preference number: 2 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLAFSRI*TINNPP
Trigger: TGGAGGGTTGTTAATGGTGCAAATCCTACTGAATGC...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGGAAGTTTTTCATCGTaGAAACCACATATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: PYHISVLTVGFVVASVQPGSFSS*KPHISE
Trigger: TTCAGAAATATGTGGTTTCCACGATGAAAAACTTCC...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGTGGTCTCTTCACCTTTaGTTGGAAGAAAATATCCTT +
Preference number: 2 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLWSLHL*LEENIL
Trigger: AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCA...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGAATATTGTGTTTCTGTaGCAAGATTTTACAGCGAGC +
Preference number: 2 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLNIVFL*QDFTAS
Trigger: GCTCGCTGTAAAATCTTGGCACAGAAACACAATATT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGAAAGTGATTAAATTGTaGATAGTAACCCTCGCACAG +
Preference number: 2 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLKVIKL*IVTLAQ
Trigger: CTGTGCGAGGGTTACTATGCACAATTTAATCACTTT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAACTGAGTCTTTTCAGTaGAAGGCCGTCCTTGCCTGC +
Preference number: 3 (lower is better)
Translates to: PYHISVLTVGFVVASVQPTESFQ*KAVLAC
Trigger: GCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR TCA 72 bp ACCTCTGCTGTTCTGATCCTTATCACATCTCTGTTTTaGCTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: TSAVLILITSLF*LLALLLPVFSQ
Trigger: CTGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGGATCAGAACAGCAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGACTGAGTCTTTTCAGTaGAAGGCCGTCCTTGCCTGC +
Preference number: 3 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLTESFQ*KAVLAC
Trigger: GCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAAAGTGTAGGAGAGTTTaGATTCTCACACTCCTCAAG +
Preference number: 3 (lower is better)
Translates to: PYHISVLTVGFVVASVQPKCRRV*ILTLLK
Trigger: CTTGAGGAGTGTGAGAATCAAAACTCTCCTACACTT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR GCA 72 bp GCATTCAGTAGGATTTGCACCATTAACAACCCTCCATaGATTTGCCTGTGGGCATTCAACATCTGTCATTTT +
Preference number: 3 (lower is better)
Translates to: AFSRICTINNPP*ICLWAFNICHF
Trigger: AAAATGACAGATGTTGAATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAAATAAACATAAATGCTaGCTCACACAGGCATTCCTC +
Preference number: 3 (lower is better)
Translates to: PYHISVLTVGFVVASVQPNKHKC*LTQAFL
Trigger: GAGGAATGCCTGTGTGAGCAAGCATTTATGTTTATT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR TCA 72 bp CTCCTCAAGGCTAGAGCAGCTTTGGCAATTACTGACTaGGAATTTTTCATTGCCAGTGATCAACTGAAAACT +
Preference number: 3 (lower is better)
Translates to: LLKARAALAITD*EFFIASDQLKT
Trigger: AGTTTTCAGTTGATCACTGGCAATGAAAAATTCTCAGTCAGTAATTGCCAAAGCTGCTCTAGCCTTGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGTTGGTCTCTTCACCTTaGCTTGGAAGAAAATATCCT +
Preference number: 3 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLLVSSP*LGRKYP
Trigger: AGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAA...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR GCA 72 bp TTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTaGCAGTGTTCAGCCAGAACTTCTCTGAAACTTTTT +
Preference number: 3 (lower is better)
Translates to: LSHLCFDCWLCC*QCSARTSLKLF
Trigger: AAAAAGTTTCAGAGAAGTTCTGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
3UTR TCA 72 bp TTACTGACTGAGAATTTTTCATTGCCAGTGATCAACTaGAAACTGGAGATTCCTTTGGAATTGTTAAATCTG +
Preference number: 3 (lower is better)
Translates to: LLTENFSLPVIN*KLEIPLELLNL
Trigger: CAGATTTAACAATTCCAAAGGAATCTCCAGTTTTCAGTTGATCACTGGCAATGAAAAATTCTCAGTCAGTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCTCACAGAGCCATTCTaGGGCTGGCGGACGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTLTEPF*GWRTAL
Trigger: CAGGGCCGTCCGCCAGCCTCAGAATGGCTCTGTGAG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTGCTGGCGGACGGCCCTaGATGTCACAGCTTTACACG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTAGGRP*MSQLYT
Trigger: CGTGTAAAGCTGTGACATGCAGGGCCGTCCGCCAGC...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAGCCTCGCTCGGGGTTaGACAAGGCTGTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTSLARG*TRLCTG
Trigger: TCCAGTGCACAGCCTTGTCCAACCCCGAGCGAGGCT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCAGACCAGTGTCCTGTaGCTCCACATGTCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTQTSVL*LHMSEL
Trigger: CAGCTCGGACATGTGGAGCCACAGGACACTGGTCTG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCCAGATGAGGTACACTaGAGGCTCTGGGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTPDEVH*RLWAPI
Trigger: AATGGGAGCCCAGAGCCTTCAGTGTACCTCATCTGG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTTGTGTCCACTGCCCTTaGGTGGTGCATTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTCVHCP*VVHSTW
Trigger: CCAGGTTGAATGCACCACTCAAGGGCAGTGGACACA...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTACTGCATGGTCTCCATaGTGCTTGGCAGGTAACCCC +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTTAWSP*CLAGNP
Trigger: GGGGTTACCTGCCAAGCAGCATGGAGACCATGCAGT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCAGCAGGGGAATGGCTaGACCTCACAGAGCCATTCT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTQQGNG*TSQSHS
Trigger: AGAATGGCTCTGTGAGGTGCAGCCATTCCCCTGCTG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCAGGACAGGCGAACTTaGACACAGTGCCAAACACGG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTQDRRT*TQCQTR
Trigger: CCGTGTTTGGCACTGTGTGCAAGTTCGCCTGTCCTG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTGCATTCAACCTGGGCTaGTCCCTGCAACATGAAGCC +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTAFNLG*SLQHEA
Trigger: GGCTTCATGTTGCAGGGACCAGCCCAGGTTGAATGC...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTGTCCCAATTCCCAGATaGGGTACACTGAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTVPIPR*GTLKAL
Trigger: CAGAGCCTTCAGTGTACCTCATCTGGGAATTGGGAC...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTATCCCTCCTCACAGCTaGAGGCACAAGAGGACTTGT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTIPPHS*RHKRTC
Trigger: ACAAGTCCTCTTGTGCCTTCAGCTGTGAGGAGGGAT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCTGAGTCTTTTCAGTTaGAGGCCGTCCTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTLSLFS*RPSLPA
Trigger: AGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTTTCCCAGTGGGTGACTaGAAACCAGGCTTCCATGCT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTFPVGD*KPGFHA
Trigger: AGCATGGAAGCCTGGTTTGCAGTCACCCACTGGGAA...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGCTGGCGGACGGCCCTaGATGTCACAGCTTTACACG +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHAGGRP*MSQLYT
Trigger: CGTGTAAAGCTGTGACATGCAGGGCCGTCCGCCAGC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTACAGGATCTCTCAGGTaGGTATCACTGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTTGSLR*VSLLPL
Trigger: CAGAGGCAGCAGTGATACCCACCTGAGAGATCCTGT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333360.12
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTTCTGTCAGAGGTTTCTaGGTTCCTACCCAGACCCAC +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTSVRGF*VPTQTH
Trigger: GTGGGTCTGGGTAGGAACCCAGAAACCTCTGACAGA...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGAGCTGCAGAGCCATTaGGCGTCCATCCTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHELQSH*ASILQD
Trigger: GTCCTGAAGGATGGACGCTCAATGGCTCTGCAGCTC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTATTCACCGTGGCCACTaGAGGATGTATTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTIHRGH*RMYWYR
Trigger: CCTGTACCAATACATCCTGCAGTGGCCACGGTGAAT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTATTGTTGGGTTCACCTaGAGCCCAGTTCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTIVGFT*SPVLGF
Trigger: GAAGCCAAGAACTGGGCTCCAGGTGAACCCAACAAT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTCTCCAGCAGGGGAATaGCTGCACCTCACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHSPAGE*LHLTEP
Trigger: TGGCTCTGTGAGGTGCAGCCATTCCCCTGCTGGAGA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTGTCCCACTCCCCTGTaGGGCCACATTGGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHCPTPL*GHIGAF
Trigger: AAAGGCTCCAATGTGGCCCCACAGGGGAGTGGGACA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACCCTTCGGGGGCTGGTaGACAGCATCGCATCTCACA +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPPFGGW*TASHLT
Trigger: TGTGAGATGCGATGCTGTCCACCAGCCCCCGAAGGG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCCAGATGAGGTACACTaGAGGCTCTGGGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHPDEVH*RLWAPI
Trigger: AATGGGAGCCCAGAGCCTTCAGTGTACCTCATCTGG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCTCACAGAGCCATTCTaGGGCTGGCGGACGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILLTEPF*GWRTAL
Trigger: CAGGGCCGTCCGCCAGCCTCAGAATGGCTCTGTGAG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCTCACAGAGCCATTCTaGGGCTGGCGGACGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLLTEPF*GWRTAL
Trigger: CAGGGCCGTCCGCCAGCCTCAGAATGGCTCTGTGAG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTGATCTATTGAAGTGGTaGTGGGTGTTGCGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTDLLKW*WVLRFQ
Trigger: CTGAAACCGCAACACCCATCACCACTTCAATAGATC...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCGGAACTGCCAGGCTTaGACATTTTACCACTTCACA +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTRNCQA*TFYHFT
Trigger: TGTGAAGTGGTAAAATGTTCAAGCCTGGCAGTTCCG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367777.5
CDS-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCAAACCAGGCTTCCATaGTCAGGGGATTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHQTRLP*SGDSRA
Trigger: AGCCCTGGAATCCCCTGAGCATGGAAGCCTGGTTTG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATACTGCATGGTCTCCATaGTGCTTGGCAGGTAACCCC +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHTAWSP*CLAGNP
Trigger: GGGGTTACCTGCCAAGCAGCATGGAGACCATGCAGT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCAGCAGGGGAATGGCTaGACCTCACAGAGCCATTCT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHQQGNG*TSQSHS
Trigger: AGAATGGCTCTGTGAGGTGCAGCCATTCCCCTGCTG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATACTGCCCTTGAGTGGTaGATTCAACCTGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHTALEW*IQPGLV
Trigger: GACCAGCCCAGGTTGAATGCACCACTCAAGGGCAGT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACGAACTTGCACACAGTaGCAAACACGGGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPRTCTQ*QTRAPH
Trigger: GTGGGGAGCCCGTGTTTGGCACTGTGTGCAAGTTCG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCAAGGCTTTGGCAGCTaGTGGCAGGAACAAATTTCT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTQGFGS*WQEQIS
Trigger: AGAAATTTGTTCCTGCCAGCAGCTGCCAAAGCCTTG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAACCCTCCATGCATTTaGCTGTGGGCATTCAACATC +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTNPPCI*LWAFNI
Trigger: GATGTTGAATGCCCACAGGCAAATGCATGGAGGGTT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCTTTTTGCCTATTGTTaGGTTCACCTGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTLFAYC*VHLEPS
Trigger: ACTGGGCTCCAGGTGAACCCAACAATAGGCAAAAAG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTACAGGTTGTGTTCCATaGGAAGCTTCCAGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTTGCVP*EASRVL
Trigger: CAAAACCCTGGAAGCTTCCCATGGAACACAACCTGT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGCATTCAACCTGGGCTaGTCCCTGCAACATGAAGCC +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHAFNLG*SLQHEA
Trigger: GGCTTCATGTTGCAGGGACCAGCCCAGGTTGAATGC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGTGGTGCATTCAACCTaGGCTGGTCCCTGCAACATG +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHVVHST*AGPCNM
Trigger: CATGTTGCAGGGACCAGCCCAGGTTGAATGCACCAC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGAGCCTCGCTCGGGGTTaGACAAGGCTGTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQSLARG*TRLCTG
Trigger: TCCAGTGCACAGCCTTGTCCAACCCCGAGCGAGGCT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCCTGTGGGGCCACATTaGAGCCTTTTGGATCCCTTC +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHPVGPH*SLLDPF
Trigger: GAAGGGATCCAAAAGGCTCCAATGTGGCCCCACAGG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCCCTTCGGGGGCTGGTaGACAGCATCGCATCTCACA +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQPFGGW*TASHLT
Trigger: TGTGAGATGCGATGCTGTCCACCAGCCCCCGAAGGG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACAGACCAGTGTCCTGTaGCTCCACATGTCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPQTSVL*LHMSEL
Trigger: CAGCTCGGACATGTGGAGCCACAGGACACTGGTCTG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATATCCCTCCTCACAGCTaGAGGCACAAGAGGACTTGT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHIPPHS*RHKRTC
Trigger: ACAAGTCCTCTTGTGCCTTCAGCTGTGAGGAGGGAT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR TCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGAGCTGCAGAGCCATTaGGCGTCCATCCTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQELQSH*ASILQD
Trigger: GTCCTGAAGGATGGACGCTCAATGGCTCTGCAGCTC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTTTGCCTGCTGGACTTTaGTCTATTGAAGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTLPAGL*SIEVVM
Trigger: CATCACCACTTCAATAGATCAAAGTCCAGCAGGCAA...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGGTGGGTATCACTGCTaGCTCTGTCTCAGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHGGYHC*LCLRSV
Trigger: TACTGACCTGAGACAGAGGCAGCAGTGATACCCACC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333360.12
CDS-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGCATGGTCTCCATGCTaGTTGGCAGGTAACCCCTAT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHAWSPC*LAGNPY
Trigger: ATAGGGGTTACCTGCCAAGCAGCATGGAGACCATGC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAACTGCCCTTGAGTGGTaGATTCAACCTGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPTALEW*IQPGLV
Trigger: GACCAGCCCAGGTTGAATGCACCACTCAAGGGCAGT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCGAACTTGCACACAGTaGCAAACACGGGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQRTCTQ*QTRAPH
Trigger: GTGGGGAGCCCGTGTTTGGCACTGTGTGCAAGTTCG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTATTAACAACCCTCCATaGATTTGCCTGTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTINNPP*ICLWAF
Trigger: GAATGCCCACAGGCAAATGCATGGAGGGTTGTTAAT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTATTCCACGAACCCATTaGCTGGATTTGTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTIPRTH*LDLSQH
Trigger: ATGCTGTGACAAATCCAGCCAATGGGTTCGTGGAAT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAAGCTTCCAGGGTTTTaGAAACATTCCACGAACCCA +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTKLPGF*KHSTNP
Trigger: TGGGTTCGTGGAATGTTTCCAAAACCCTGGAAGCTT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCACAGCTTTACACGTTaGCTTCTCGTTGTCCCAATT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTHSFTR*LLVVPI
Trigger: AATTGGGACAACGAGAAGCCAACGTGTAAAGCTGTG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGTGGTGCATTCAACCTaGGCTGGTCCCTGCAACATG +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPVVHST*AGPCNM
Trigger: CATGTTGCAGGGACCAGCCCAGGTTGAATGCACCAC...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCAGACCAGTGTCCTGTaGCTCCACATGTCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQQTSVL*LHMSEL
Trigger: CAGCTCGGACATGTGGAGCCACAGGACACTGGTCTG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTATAGGAGTTTTGATGTaGAGTCAGCCAAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTIGVLM*SQPRTA
Trigger: AGCTGTTCTTGGCTGACTTCACATCAAAACTCCTAT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333360.12
CDS-3UTR TCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAAAGTTTCCCAGTGGGTaGCTGCAAACCAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPKFPSG*LQTRLP
Trigger: TGGAAGCCTGGTTTGCAGTCACCCACTGGGAAACTT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGTCCCAATTCCCAGATaGGGTACACTGAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPVPIPR*GTLKAL
Trigger: CAGAGCCTTCAGTGTACCTCATCTGGGAATTGGGAC...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATCTCCAATAGGGGAATaGGCACACCTCACCAAACCC +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPSPIGE*AHLTKP
Trigger: GGGTTTGGTGAGGTGTGCTCATTCCCCTATTGGAGA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCGGAACTGCCAGGCTTaGACATTTTACCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHRNCQA*TFYHLA
Trigger: TGCCAAGTGGTAAAATGTTCAAGCCTGGCAGTTCCG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR TCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACTGAGTCTTTTCAGTTaGAGGCCGTCCTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPLSLFS*RPSLPA
Trigger: AGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCAGTCCTCATCTTTTTaGCTATTGTTGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTQSSSF*LLLGSP
Trigger: AGGTGAACCCAACAATAGGCAAAAAGATGAGGACTG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTGTACAGTTCACAATTTaGTCACACTTGAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTVQFTI*SHLSPL
Trigger: CAGTGGACTCAAGTGTGAGCAAATTGTGAACTGTAC...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATTCCCAGTGGGTGACTaGAAACCAGGCTTCCATGCT +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPFPVGD*KPGFHA
Trigger: AGCATGGAAGCCTGGTTTGCAGTCACCCACTGGGAA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGCATGGTCTCCATGCTaGTTGGCAGGTAACCCCTAT +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPAWSPC*LAGNPY
Trigger: ATAGGGGTTACCTGCCAAGCAGCATGGAGACCATGC...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTATTGTCCCTGAGATGTaGACTCAAGTTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTIVPEM*TQVELI
Trigger: GATCAACTCAACTTGAGTGCACATCTCAGGGACAAT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCAGGACAGGCGAACTTaGACACAGTGCCAAACACGG +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQQDRRT*TQCQTR
Trigger: CCGTGTTTGGCACTGTGTGCAAGTTCGCCTGTCCTG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGTTGAAGGCCGTCCTTaGCTGCTGGACTTTGATCTA +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHVEGRP*LLDFDL
Trigger: TAGATCAAAGTCCAGCAGGCAAGGACGGCCTTCAAC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTGCATTCAGTAGGATTTaGACCATTAACAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTAFSRI*TINNPP
Trigger: TGGAGGGTTGTTAATGGTGCAAATCCTACTGAATGC...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATCTGTCAGAGGTTTCTaGGTTCCTACCCAGACCCAC +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPSVRGF*VPTQTH
Trigger: GTGGGTCTGGGTAGGAACCCAGAAACCTCTGACAGA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGGTCTCCATGCTGCTTaGCAGGTAACCCCTATCACA +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPGLHAA*QVTPIT
Trigger: TGTGATAGGGGTTACCTGCCAAGCAGCATGGAGACC...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGTCCACTGCCCTTGAGTaGTGCATTCAACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQSTALE*CIQPGL
Trigger: CAGCCCAGGTTGAATGCACCACTCAAGGGCAGTGGA...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCCTGTGGGGCCACATTaGAGCCTTTTGGATCCCTTC +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQPVGPH*SLLDPF
Trigger: GAAGGGATCCAAAAGGCTCCAATGTGGCCCCACAGG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCCCTTCGGGGGCTGGTaGACAGCATCGCATCTCACA +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILPFGGW*TASHLT
Trigger: TGTGAGATGCGATGCTGTCCACCAGCCCCCGAAGGG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCTACCAAGGGAATGTTaGACTCAGTGGGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHLPREC*TQWELH
Trigger: GTGAAGCTCCCACTGAGTCCAACATTCCCTTGGTAG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTCTGATTCAAGGCTTTaGCAGCTGCTGGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHSDSRL*QLLAGT
Trigger: TGTTCCTGCCAGCAGCTGCCAAAGCCTTGAATCAGA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTGAGATTTCAGAGTCTTaGTCTCTTCACCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTEISES*SLHLCL
Trigger: CAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTC...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCTCTGTTTTGACTGTTaGCTTTGTTGTTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTLCFDC*LCCCQC
Trigger: ACACTGGCAACAACAAAGCCAACAGTCAAAACAGAG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATAGGAAGAATTGTAGCTaGAGTTTCCCAGTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHRKNCS*SFPVGD
Trigger: GTCACCCACTGGGAAACTTCAGCTACAATTCTTCCT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGTCCCAATTCCCAGATaGGGTACACTGAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQVPIPR*GTLKAL
Trigger: CAGAGCCTTCAGTGTACCTCATCTGGGAATTGGGAC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGGTGAAGTTGCAGGATaGTTTGAAGGTGAACTCTCC +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHGEVAG*FEGELS
Trigger: GGAGAGTTCACCTTCAAATCATCCTGCAACTTCACC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACGGAACTGCCAGGCTTaGACATTTTACCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPRNCQA*TFYHLA
Trigger: TGCCAAGTGGTAAAATGTTCAAGCCTGGCAGTTCCG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTGAGCTGCAGAGCCATTaGGCGTCCATCCTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILELQSH*ASILQD
Trigger: GTCCTGAAGGATGGACGCTCAATGGCTCTGCAGCTC...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTTGGTAGCTTCCATCTaGTTCAAGGCTTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHLVASI*FKALAA
Trigger: AGCTGCCAAAGCCTTGAATCAGATGGAAGCTACCAA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGGGCAAGCTTCTTCTTaGTGCACCTCTCATCATTCC +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPGQASS*CTSHHS
Trigger: GGAATGATGAGAGGTGCAGCAAGAAGAAGCTTGCCC...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGCATGGTCTCCATGCTaGTTGGCAGGTAACCCCTAT +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQAWSPC*LAGNPY
Trigger: ATAGGGGTTACCTGCCAAGCAGCATGGAGACCATGC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGGTTGGACAAGGCTGTaGACTGGAAAGCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHGWTRL*TGKLHK
Trigger: TTTGTGAAGCTTTCCAGTGCACAGCCTTGTCCAACC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCGAACTTGCACACAGTaGCAAACACGGGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILRTCTQ*QTRAPH
Trigger: GTGGGGAGCCCGTGTTTGGCACTGTGTGCAAGTTCG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCGAACTTGCACACAGTaGCAAACACGGGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLRTCTQ*QTRAPH
Trigger: GTGGGGAGCCCGTGTTTGGCACTGTGTGCAAGTTCG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCAAGGCTTTGGCAGCTaGTGGCAGGAACAAATTTCT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHQGFGS*WQEQIS
Trigger: AGAAATTTGTTCCTGCCAGCAGCTGCCAAAGCCTTG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTTTCCCAGAGTTTTTCTaGCCCTTTAAAAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTFPEFF*PFKRTS
Trigger: AGAGGTTCTTTTAAAGGGGCAGAAAAACTCTGGGAA...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGTCTGTCAGAGGTTTCTaGGTTCCTACCCAGACCCAC +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQSVRGF*VPTQTH
Trigger: GTGGGTCTGGGTAGGAACCCAGAAACCTCTGACAGA...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAATTGTTGGGTTCACCTaGAGCCCAGTTCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPIVGFT*SPVLGF
Trigger: GAAGCCAAGAACTGGGCTCCAGGTGAACCCAACAAT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTTCTCCAGCAGGGGAATaGCTGCACCTCACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILSPAGE*LHLTEP
Trigger: TGGCTCTGTGAGGTGCAGCCATTCCCCTGCTGGAGA...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGTCTCCAGCAGGGGAATaGCTGCACCTCACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLSPAGE*LHLTEP
Trigger: TGGCTCTGTGAGGTGCAGCCATTCCCCTGCTGGAGA...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTAAACCCTTCGGGGGCTaGTGGACAGCATCGCATCTC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILKPFGG*WTASHL
Trigger: GAGATGCGATGCTGTCCACCAGCCCCCGAAGGGTTT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATCTGATTCAAGGCTTTaGCAGCTGCTGGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPSDSRL*QLLAGT
Trigger: TGTTCCTGCCAGCAGCTGCCAAAGCCTTGAATCAGA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTACTGTGAAGCAATCATaGCTTCAAGAGTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTTVKQS*LQEFFS
Trigger: TGAAAAGAACTCTTGAAGTCATGATTGCTTCACAGT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTTGTGTCCACTGCCCTTaGGTGGTGCATTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILCVHCP*VVHSTW
Trigger: CCAGGTTGAATGCACCACTCAAGGGCAGTGGACACA...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCGGAACTGCCAGGCTTaGACATTTTACCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQRNCQA*TFYHLA
Trigger: TGCCAAGTGGTAAAATGTTCAAGCCTGGCAGTTCCG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR TCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATTGGTAGCTTCCATCTaGTTCAAGGCTTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPLVASI*FKALAA
Trigger: AGCTGCCAAAGCCTTGAATCAGATGGAAGCTACCAA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTTGCCTGCTGGACTTTaGTCTATTGAAGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHLPAGL*SIEVVM
Trigger: CATCACCACTTCAATAGATCAAAGTCCAGCAGGCAA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCTACCACACTTGTATTaGATGAAGAAGTATGGAAGA +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTLPHLY*MKKYGR
Trigger: TCTTCCATACTTCTTCATTCAATACAAGTGTGGTAG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTTTGGCAATTACTGACTaGGAATTTTTCATTGCCAGT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTLAITD*EFFIAS
Trigger: ACTGGCAATGAAAAATTCTCAGTCAGTAATTGCCAA...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAGCTTTGGCAATTACTaGCTGAGAATTTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTSFGNY*LRIFHC
Trigger: GCAATGAAAAATTCTCAGTCAGTAATTGCCAAAGCT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGGGCAAGCTTCTTCTTaGTGCACCTCTCATCATTCC +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQGQASS*CTSHHS
Trigger: GGAATGATGAGAGGTGCAGCAAGAAGAAGCTTGCCC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCAAACCAGGCTTCCATaGTCAGGGGATTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILQTRLP*SGDSRA
Trigger: AGCCCTGGAATCCCCTGAGCATGGAAGCCTGGTTTG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCAAACCAGGCTTCCATaGTCAGGGGATTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLQTRLP*SGDSRA
Trigger: AGCCCTGGAATCCCCTGAGCATGGAAGCCTGGTTTG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTACTGCATGGTCTCCATaGTGCTTGGCAGGTAACCCC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILTAWSP*CLAGNP
Trigger: GGGGTTACCTGCCAAGCAGCATGGAGACCATGCAGT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCAGCAGGGGAATGGCTaGACCTCACAGAGCCATTCT +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLQQGNG*TSQSHS
Trigger: AGAATGGCTCTGTGAGGTGCAGCCATTCCCCTGCTG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTACCTGGGCTGGTCCCTaGAACATGAAGCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILTWAGP*NMKPSS
Trigger: TGAGGAAGGCTTCATGTTGCAGGGACCAGCCCAGGT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGACCTGGGCTGGTCCCTaGAACATGAAGCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLTWAGP*NMKPSS
Trigger: TGAGGAAGGCTTCATGTTGCAGGGACCAGCCCAGGT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTACTGCCCTTGAGTGGTaGATTCAACCTGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILTALEW*IQPGLV
Trigger: GACCAGCCCAGGTTGAATGCACCACTCAAGGGCAGT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCAGGACAGGCGAACTTaGACACAGTGCCAAACACGG +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLQDRRT*TQCQTR
Trigger: CCGTGTTTGGCACTGTGTGCAAGTTCGCCTGTCCTG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTTCCACATGTCCGAGCTaGAGAGCCATTGAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILSTCPS*RAIERP
Trigger: TGGACGCTCAATGGCTCTGCAGCTCGGACATGTGGA...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGTCCACATGTCCGAGCTaGAGAGCCATTGAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLSTCPS*RAIERP
Trigger: TGGACGCTCAATGGCTCTGCAGCTCGGACATGTGGA...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGAGTGGTGATGGGTGTTaGGGTTTCAGCCATAAAGGC +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQSGDGC*GFSHKG
Trigger: GCCTTTATGGCTGAAACCGCAACACCCATCACCACT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGTTGAAGGCCGTCCTTaGCTGCTGGACTTTGATCTA +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQVEGRP*LLDFDL
Trigger: TAGATCAAAGTCCAGCAGGCAAGGACGGCCTTCAAC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTTGGTCTCTTCACCTTTaGTTGGAAGAAAATATCCTT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTWSLHL*LEENIL
Trigger: AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCA...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAATATTGTGTTTCTGTaGCAAGATTTTACAGCGAGC +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTNIVFL*QDFTAS
Trigger: GCTCGCTGTAAAATCTTGGCACAGAAACACAATATT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAAAGTGATTAAATTGTaGATAGTAACCCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTKVIKL*IVTLAQ
Trigger: CTGTGCGAGGGTTACTATGCACAATTTAATCACTTT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTATAAACATAAATGCTTaGTCACACAGGCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTININA*SHRHSS
Trigger: AGAGGAATGCCTGTGTGAGCAAGCATTTATGTTTAT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTGTTGGCTTTGTTGTTaGCAGTGTTCAGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHCWLCC*QCSART
Trigger: AGTTCTGGCTGAACACTGGCAACAACAAAGCCAACA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGATTGTTGGGTTCACCTaGAGCCCAGTTCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQIVGFT*SPVLGF
Trigger: GAAGCCAAGAACTGGGCTCCAGGTGAACCCAACAAT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACTTTTTGCCTATTGTTaGGTTCACCTGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPLFAYC*VHLEPS
Trigger: ACTGGGCTCCAGGTGAACCCAACAATAGGCAAAAAG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATAAGCTTCCAGGGTTTTaGAAACATTCCACGAACCCA +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHKLPGF*KHSTNP
Trigger: TGGGTTCGTGGAATGTTTCCAAAACCCTGGAAGCTT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAACAGGTTGTGTTCCATaGGAAGCTTCCAGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPTGCVP*EASRVL
Trigger: CAAAACCCTGGAAGCTTCCCATGGAACACAACCTGT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCACAGCTTTACACGTTaGCTTCTCGTTGTCCCAATT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHHSFTR*LLVVPI
Trigger: AATTGGGACAACGAGAAGCCAACGTGTAAAGCTGTG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTGCATTCAACCTGGGCTaGTCCCTGCAACATGAAGCC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILAFNLG*SLQHEA
Trigger: GGCTTCATGTTGCAGGGACCAGCCCAGGTTGAATGC...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGGTGGTGCATTCAACCTaGGCTGGTCCCTGCAACATG +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLVVHST*AGPCNM
Trigger: CATGTTGCAGGGACCAGCCCAGGTTGAATGCACCAC...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTGTGGTGCATTCAACCTaGGCTGGTCCCTGCAACATG +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILVVHST*AGPCNM
Trigger: CATGTTGCAGGGACCAGCCCAGGTTGAATGCACCAC...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGTCCACTGCCCTTGAGTaGTGCATTCAACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLSTALE*CIQPGL
Trigger: CAGCCCAGGTTGAATGCACCACTCAAGGGCAGTGGA...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTTCCACTGCCCTTGAGTaGTGCATTCAACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILSTALE*CIQPGL
Trigger: CAGCCCAGGTTGAATGCACCACTCAAGGGCAGTGGA...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGGCTTTGGCAGCTGCTaGCAGGAACAAATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPGFGSC*QEQISL
Trigger: CAAAGAAATTTGTTCCTGCCAGCAGCTGCCAAAGCC...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAAGCCATAAAGGCATCTaGCATAGTAGGCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPSHKGI*HSRQEG
Trigger: CCCTTCTTGCCTACTATGCCAGATGCCTTTATGGCT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCCATGCATTTGCCTGTaGGCATTCAACATCTGTCAT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHPCICL*AFNICH
Trigger: ATGACAGATGTTGAATGCCCACAGGCAAATGCATGG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCTCAGAACTTTATTCTaGTTAACATCATGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTLRTLF*LTSCLA
Trigger: AGCAAGGCATGATGTTAACCAGAATAAAGTTCTGAG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTAAGTTTCCCAGTGGGTaGCTGCAAACCAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILKFPSG*LQTRLP
Trigger: TGGAAGCCTGGTTTGCAGTCACCCACTGGGAAACTT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGGTGAAGTTGCAGGATaGTTTGAAGGTGAACTCTCC +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQGEVAG*FEGELS
Trigger: GGAGAGTTCACCTTCAAATCATCCTGCAACTTCACC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTTCTCCAATAGGGGAATaGGCACACCTCACCAAACCC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILSPIGE*AHLTKP
Trigger: GGGTTTGGTGAGGTGTGCTCATTCCCCTATTGGAGA...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTATCCCTCCTCACAGCTaGAGGCACAAGAGGACTTGT +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILIPPHS*RHKRTC
Trigger: ACAAGTCCTCTTGTGCCTTCAGCTGTGAGGAGGGAT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR TCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATTGCCTGCTGGACTTTaGTCTATTGAAGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPLPAGL*SIEVVM
Trigger: CATCACCACTTCAATAGATCAAAGTCCAGCAGGCAA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTTGCCAGTGATCAACTaGAAACTGGAGATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHLPVIN*KLEIPL
Trigger: CAAAGGAATCTCCAGTTTTCAGTTGATCACTGGCAA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTTCAGGTGGGTATCACTaGTGCCTCTGTCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILSGGYH*CLCLRS
Trigger: TGACCTGAGACAGAGGCAGCAGTGATACCCACCTGA...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333360.12
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGGTTGGACAAGGCTGTaGACTGGAAAGCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQGWTRL*TGKLHK
Trigger: TTTGTGAAGCTTTCCAGTGCACAGCCTTGTCCAACC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCAAGGCTTTGGCAGCTaGTGGCAGGAACAAATTTCT +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQQGFGS*WQEQIS
Trigger: AGAAATTTGTTCCTGCCAGCAGCTGCCAAAGCCTTG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGCATTCAGTAGGATTTaGACCATTAACAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHAFSRI*TINNPP
Trigger: TGGAGGGTTGTTAATGGTGCAAATCCTACTGAATGC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATGTTGGCTTTGTTGTTaGCAGTGTTCAGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPCWLCC*QCSART
Trigger: AGTTCTGGCTGAACACTGGCAACAACAAAGCCAACA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGGGTCTCCATGCTGCTTaGCAGGTAACCCCTATCACA +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLGLHAA*QVTPIT
Trigger: TGTGATAGGGGTTACCTGCCAAGCAGCATGGAGACC...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTGGTCTCCATGCTGCTTaGCAGGTAACCCCTATCACA +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILGLHAA*QVTPIT
Trigger: TGTGATAGGGGTTACCTGCCAAGCAGCATGGAGACC...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCACATTGGAGCCTTTTaGATCCCTTCAACACAAAAC +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHHIGAF*IPSTQN
Trigger: GTTTTGTGTTGAAGGGATCCAAAAGGCTCCAATGTG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGAACATTTTACCACTTaGCAGGAAGGAACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHEHFTT*QEGTSS
Trigger: AGAAGAGGTTCCTTCCTGCCAAGTGGTAAAATGTTC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGGCTTTGGCAGCTGCTaGCAGGAACAAATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQGFGSC*QEQISL
Trigger: CAAAGAAATTTGTTCCTGCCAGCAGCTGCCAAAGCC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACCATGCATTTGCCTGTaGGCATTCAACATCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPPCICL*AFNICH
Trigger: ATGACAGATGTTGAATGCCCACAGGCAAATGCATGG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTGGAAGTTTTTCATCGTaGAAACCACATATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTGSFSS*KPHISE
Trigger: TTCAGAAATATGTGGTTTCCACGATGAAAAACTTCC...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTTTAGTTCAAAACGTTTaGCCTCATGGAAGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTLVQNV*PHGSFS
Trigger: TGAAAAACTTCCATGAGGCCAAACGTTTTGAACTAA...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCTCTGTTTTGACTGTTaGCTTTGTTGTTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHLCFDC*LCCCQC
Trigger: ACACTGGCAACAACAAAGCCAACAGTCAAAACAGAG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAAACACAAACCACACTaGTATTTCACACAGCTAATT +
Preference number: 4 (lower is better)
Translates to: RKGNTESFQLKAVLACWTKHKPH*YFTQLI
Trigger: AATTAGCTGTGTGAAATACCAGTGTGGTTTGTGTTT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGATGTGCACTCAAGTTaGGTTGATCCATGTAATTCA +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHDVHSS*VDPCNS
Trigger: TGAATTACATGGATCAACTCAACTTGAGTGCACATC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACAGTCCTCATCTTTTTaGCTATTGTTGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPQSSSF*LLLGSP
Trigger: AGGTGAACCCAACAATAGGCAAAAAGATGAGGACTG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGGGGCAAGCTTCTTCTTaGTGCACCTCTCATCATTCC +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLGQASS*CTSHHS
Trigger: GGAATGATGAGAGGTGCAGCAAGAAGAAGCTTGCCC...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTATTCACCGTGGCCACTaGAGGATGTATTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILIHRGH*RMYWYR
Trigger: CCTGTACCAATACATCCTGCAGTGGCCACGGTGAAT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGATTCACCGTGGCCACTaGAGGATGTATTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLIHRGH*RMYWYR
Trigger: CCTGTACCAATACATCCTGCAGTGGCCACGGTGAAT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGATTAACAACCCTCCATaGATTTGCCTGTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQINNPP*ICLWAF
Trigger: GAATGCCCACAGGCAAATGCATGGAGGGTTGTTAAT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGTGTTGGCTTTGTTGTTaGCAGTGTTCAGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQCWLCC*QCSART
Trigger: AGTTCTGGCTGAACACTGGCAACAACAAAGCCAACA...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCACAGCTTTACACGTTaGCTTCTCGTTGTCCCAATT +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQHSFTR*LLVVPI
Trigger: AATTGGGACAACGAGAAGCCAACGTGTAAAGCTGTG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGGACAAGGCTGTGCACTaGAAAGCTTCACAAACTGGG +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLDKAVH*KASQTG
Trigger: CCCAGTTTGTGAAGCTTTCCAGTGCACAGCCTTGTC...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGAACATTTTACCACTTaGCAGGAAGGAACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPEHFTT*QEGTSS
Trigger: AGAAGAGGTTCCTTCCTGCCAAGTGGTAAAATGTTC...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCTACCAAGGGAATGTTaGACTCAGTGGGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLLPREC*TQWELH
Trigger: GTGAAGCTCCCACTGAGTCCAACATTCCCTTGGTAG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCCATGCATTTGCCTGTaGGCATTCAACATCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQPCICL*AFNICH
Trigger: ATGACAGATGTTGAATGCCCACAGGCAAATGCATGG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATAAACGTTTGGCCTCATaGAAGTTTTTCATCGTGGAA +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHKRLAS*KFFIVE
Trigger: TTCCACGATGAAAAACTTCCATGAGGCCAAACGTTT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATACTGTGAAGCAATCATaGCTTCAAGAGTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHTVKQS*LQEFFS
Trigger: TGAAAAGAACTCTTGAAGTCATGATTGCTTCACAGT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCCAGTAATAACTTGGTaGATAGCTCAATATGGAGTT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHPVITW*IAQYGV
Trigger: AACTCCATATTGAGCTATTCACCAAGTTATTACTGG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTAGGAAGAATTGTAGCTaGAGTTTCCCAGTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILRKNCS*SFPVGD
Trigger: GTCACCCACTGGGAAACTTCAGCTACAATTCTTCCT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTGGTGAAGTTGCAGGATaGTTTGAAGGTGAACTCTCC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILGEVAG*FEGELS
Trigger: GGAGAGTTCACCTTCAAATCATCCTGCAACTTCACC...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGGGTGAAGTTGCAGGATaGTTTGAAGGTGAACTCTCC +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLGEVAG*FEGELS
Trigger: GGAGAGTTCACCTTCAAATCATCCTGCAACTTCACC...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTTGGCAATTACTGACTaGGAATTTTTCATTGCCAGT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHLAITD*EFFIAS
Trigger: ACTGGCAATGAAAAATTCTCAGTCAGTAATTGCCAA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCAGTCCTCATCTTTTTaGCTATTGTTGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQQSSSF*LLLGSP
Trigger: AGGTGAACCCAACAATAGGCAAAAAGATGAGGACTG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGTACAGTTCACAATTTaGTCACACTTGAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQVQFTI*SHLSPL
Trigger: CAGTGGACTCAAGTGTGAGCAAATTGTGAACTGTAC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCAAGGCTTTGGCAGCTaGTGGCAGGAACAAATTTCT +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILQGFGS*WQEQIS
Trigger: AGAAATTTGTTCCTGCCAGCAGCTGCCAAAGCCTTG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTAACCCTCCATGCATTTaGCTGTGGGCATTCAACATC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILNPPCI*LWAFNI
Trigger: GATGTTGAATGCCCACAGGCAAATGCATGGAGGGTT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGCATTCAGTAGGATTTaGACCATTAACAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQAFSRI*TINNPP
Trigger: TGGAGGGTTGTTAATGGTGCAAATCCTACTGAATGC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATATAAACATAAATGCTTaGTCACACAGGCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHININA*SHRHSS
Trigger: AGAGGAATGCCTGTGTGAGCAAGCATTTATGTTTAT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATTCCCAGAGTTTTTCTaGCCCTTTAAAAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPFPEFF*PFKRTS
Trigger: AGAGGTTCTTTTAAAGGGGCAGAAAAACTCTGGGAA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCTTTTTGCCTATTGTTaGGTTCACCTGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLLFAYC*VHLEPS
Trigger: ACTGGGCTCCAGGTGAACCCAACAATAGGCAAAAAG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCTTTTTGCCTATTGTTaGGTTCACCTGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILLFAYC*VHLEPS
Trigger: ACTGGGCTCCAGGTGAACCCAACAATAGGCAAAAAG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGAACCACATTGCAGGCTaGAATAGGAGCACTCCATTC +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLNHIAG*NRSTPF
Trigger: GAATGGAGTGCTCCTATTCCAGCCTGCAATGTGGTT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTAACCACATTGCAGGCTaGAATAGGAGCACTCCATTC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILNHIAG*NRSTPF
Trigger: GAATGGAGTGCTCCTATTCCAGCCTGCAATGTGGTT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTGGCTTTGGCAGCTGCTaGCAGGAACAAATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILGFGSC*QEQISL
Trigger: CAAAGAAATTTGTTCCTGCCAGCAGCTGCCAAAGCC...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGAGATTTCAGAGTCTTaGTCTCTTCACCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQEISES*SLHLCL
Trigger: CAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGAGGCTAGAGCAGCTTTaGCAATTACTGACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQRLEQL*QLLTEN
Trigger: ATTCTCAGTCAGTAATTGCCAAAGCTGCTCTAGCCT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGATGTGCACTCAAGTTaGGTTGATCCATGTAATTCA +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQDVHSS*VDPCNS
Trigger: TGAATTACATGGATCAACTCAACTTGAGTGCACATC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTGAACCTCTGCTGTTCTaGTCCTTATCACATCTCTGT +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILEPLLF*SLSHLC
Trigger: ACAGAGATGTGATAAGGATCAGAACAGCAGAGGTTC...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATTCTTTGTTTTGAATTaGAACCAGGTGTGTGTACCT +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPFFVLN*NQVCVP
Trigger: AGGTACACACACCTGGTTGCAATTCAAAACAAAGAA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGTTCAACACAAAACCCTaGTCACAGGAGAACTCACAG +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLFNTKP*SQENSQ
Trigger: CTGTGAGTTCTCCTGTGAGCAGGGTTTTGTGTTGAA...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTTTCAACACAAAACCCTaGTCACAGGAGAACTCACAG +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILFNTKP*SQENSQ
Trigger: CTGTGAGTTCTCCTGTGAGCAGGGTTTTGTGTTGAA...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTATTAACAACCCTCCATaGATTTGCCTGTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILINNPP*ICLWAF
Trigger: GAATGCCCACAGGCAAATGCATGGAGGGTTGTTAAT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGTGTTGGCTTTGTTGTTaGCAGTGTTCAGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLCWLCC*QCSART
Trigger: AGTTCTGGCTGAACACTGGCAACAACAAAGCCAACA...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGTTCCCAGAGTTTTTCTaGCCCTTTAAAAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQFPEFF*PFKRTS
Trigger: AGAGGTTCTTTTAAAGGGGCAGAAAAACTCTGGGAA...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTATTCCACGAACCCATTaGCTGGATTTGTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILIPRTH*LDLSQH
Trigger: ATGCTGTGACAAATCCAGCCAATGGGTTCGTGGAAT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGAAGCTTCCAGGGTTTTaGAAACATTCCACGAACCCA +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLKLPGF*KHSTNP
Trigger: TGGGTTCGTGGAATGTTTCCAAAACCCTGGAAGCTT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCACAGCTTTACACGTTaGCTTCTCGTTGTCCCAATT +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLHSFTR*LLVVPI
Trigger: AATTGGGACAACGAGAAGCCAACGTGTAAAGCTGTG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCCATGCATTTGCCTGTaGGCATTCAACATCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILPCICL*AFNICH
Trigger: ATGACAGATGTTGAATGCCCACAGGCAAATGCATGG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGAAACGTTTGGCCTCATaGAAGTTTTTCATCGTGGAA +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQKRLAS*KFFIVE
Trigger: TTCCACGATGAAAAACTTCCATGAGGCCAAACGTTT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTTAGTTCAAAACGTTTaGCCTCATGGAAGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHLVQNV*PHGSFS
Trigger: TGAAAAACTTCCATGAGGCCAAACGTTTTGAACTAA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGACTGTGAAGCAATCATaGCTTCAAGAGTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQTVKQS*LQEFFS
Trigger: TGAAAAGAACTCTTGAAGTCATGATTGCTTCACAGT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCCAGTAATAACTTGGTaGATAGCTCAATATGGAGTT +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQPVITW*IAQYGV
Trigger: AACTCCATATTGAGCTATTCACCAAGTTATTACTGG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGTTGCCAGTGATCAACTaGAAACTGGAGATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLLPVIN*KLEIPL
Trigger: CAAAGGAATCTCCAGTTTTCAGTTGATCACTGGCAA...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTTTGCCAGTGATCAACTaGAAACTGGAGATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILLPVIN*KLEIPL
Trigger: CAAAGGAATCTCCAGTTTTCAGTTGATCACTGGCAA...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGAGCTTTGGCAATTACTaGCTGAGAATTTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQSFGNY*LRIFHC
Trigger: GCAATGAAAAATTCTCAGTCAGTAATTGCCAAAGCT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGTTCTTTGTTTTGAATTaGAACCAGGTGTGTGTACCT +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQFFVLN*NQVCVP
Trigger: AGGTACACACACCTGGTTGCAATTCAAAACAAAGAA...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCAGTCCTCATCTTTTTaGCTATTGTTGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILQSSSF*LLLGSP
Trigger: AGGTGAACCCAACAATAGGCAAAAAGATGAGGACTG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGGTACAGTTCACAATTTaGTCACACTTGAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLVQFTI*SHLSPL
Trigger: CAGTGGACTCAAGTGTGAGCAAATTGTGAACTGTAC...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTATTGTCCCTGAGATGTaGACTCAAGTTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILIVPEM*TQVELI
Trigger: GATCAACTCAACTTGAGTGCACATCTCAGGGACAAT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGATTGTCCCTGAGATGTaGACTCAAGTTGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLIVPEM*TQVELI
Trigger: GATCAACTCAACTTGAGTGCACATCTCAGGGACAAT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTGCATTCAGTAGGATTTaGACCATTAACAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILAFSRI*TINNPP
Trigger: TGGAGGGTTGTTAATGGTGCAAATCCTACTGAATGC...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGTGAATAGCTCAATATaGAGTTTAGGTACTCAATCT +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPVNSSI*SLGTQS
Trigger: AGATTGAGTACCTAAACTCCATATTGAGCTATTCAC...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCACATTGGAGCCTTTTaGATCCCTTCAACACAAAAC +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLHIGAF*IPSTQN
Trigger: GTTTTGTGTTGAAGGGATCCAAAAGGCTCCAATGTG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGGAACATTTTACCACTTaGCAGGAAGGAACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLEHFTT*QEGTSS
Trigger: AGAAGAGGTTCCTTCCTGCCAAGTGGTAAAATGTTC...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTGAGATTTCAGAGTCTTaGTCTCTTCACCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILEISES*SLHLCL
Trigger: CAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTC...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATTAGTTCAAAACGTTTaGCCTCATGGAAGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPLVQNV*PHGSFS
Trigger: TGAAAAACTTCCATGAGGCCAAACGTTTTGAACTAA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTAGGCTAGAGCAGCTTTaGCAATTACTGACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILRLEQL*QLLTEN
Trigger: ATTCTCAGTCAGTAATTGCCAAAGCTGCTCTAGCCT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCTCTGTTTTGACTGTTaGCTTTGTTGTTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLLCFDC*LCCCQC
Trigger: ACACTGGCAACAACAAAGCCAACAGTCAAAACAGAG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAAAACACAAACCACACTaGTATTTCACACAGCTAATT +
Preference number: 4 (lower is better)
Translates to: PYHISVLTVGFVVASVQPKHKPH*YFTQLI
Trigger: AATTAGCTGTGTGAAATACCAGTGTGGTTTGTGTTT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGGATGTGCACTCAAGTTaGGTTGATCCATGTAATTCA +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLDVHSS*VDPCNS
Trigger: TGAATTACATGGATCAACTCAACTTGAGTGCACATC...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGTGAATAGCTCAATATaGAGTTTAGGTACTCAATCT +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQVNSSI*SLGTQS
Trigger: AGATTGAGTACCTAAACTCCATATTGAGCTATTCAC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGGAAGTTTTTCATCGTaGAAACCACATATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQGSFSS*KPHISE
Trigger: TTCAGAAATATGTGGTTTCCACGATGAAAAACTTCC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTAAACGTTTGGCCTCATaGAAGTTTTTCATCGTGGAA +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILKRLAS*KFFIVE
Trigger: TTCCACGATGAAAAACTTCCATGAGGCCAAACGTTT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGAAACACAAACCACACTaGTATTTCACACAGCTAATT +
Preference number: 4 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQKHKPH*YFTQLI
Trigger: AATTAGCTGTGTGAAATACCAGTGTGGTTTGTGTTT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGACTGTGAAGCAATCATaGCTTCAAGAGTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLTVKQS*LQEFFS
Trigger: TGAAAAGAACTCTTGAAGTCATGATTGCTTCACAGT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCTACCACACTTGTATTaGATGAAGAAGTATGGAAGA +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILLPHLY*MKKYGR
Trigger: TCTTCCATACTTCTTCATTCAATACAAGTGTGGTAG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCTACCACACTTGTATTaGATGAAGAAGTATGGAAGA +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLLPHLY*MKKYGR
Trigger: TCTTCCATACTTCTTCATTCAATACAAGTGTGGTAG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR TCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTAGCTTTGGCAATTACTaGCTGAGAATTTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILSFGNY*LRIFHC
Trigger: GCAATGAAAAATTCTCAGTCAGTAATTGCCAAAGCT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGTTCTTTGTTTTGAATTaGAACCAGGTGTGTGTACCT +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLFFVLN*NQVCVP
Trigger: AGGTACACACACCTGGTTGCAATTCAAAACAAAGAA...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTAATATTGTGTTTCTGTaGCAAGATTTTACAGCGAGC +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILNIVFL*QDFTAS
Trigger: GCTCGCTGTAAAATCTTGGCACAGAAACACAATATT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTAAAGTGATTAAATTGTaGATAGTAACCCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILKVIKL*IVTLAQ
Trigger: CTGTGCGAGGGTTACTATGCACAATTTAATCACTTT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR GCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGATAAACATAAATGCTTaGTCACACAGGCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLININA*SHRHSS
Trigger: AGAGGAATGCCTGTGTGAGCAAGCATTTATGTTTAT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCTCAGAACTTTATTCTaGTTAACATCATGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILLRTLF*LTSCLA
Trigger: AGCAAGGCATGATGTTAACCAGAATAAAGTTCTGAG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGAAATACTTTCCGTTTTaGGAAGCAGTTGTTCAAACA +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLKYFPF*EAVVQT
Trigger: TGTTTGAACAACTGCTTCCCAAAACGGAAAGTATTT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333360.12
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGGTGAATAGCTCAATATaGAGTTTAGGTACTCAATCT +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLVNSSI*SLGTQS
Trigger: AGATTGAGTACCTAAACTCCATATTGAGCTATTCAC...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTGGAAGTTTTTCATCGTaGAAACCACATATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SEISESWSLHLCLEENILGSFSS*KPHISE
Trigger: TTCAGAAATATGTGGTTTCCACGATGAAAAACTTCC...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGGGAAGTTTTTCATCGTaGAAACCACATATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLGSFSS*KPHISE
Trigger: TTCAGAAATATGTGGTTTCCACGATGAAAAACTTCC...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CCA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGAAACACAAACCACACTaGTATTTCACACAGCTAATT +
Preference number: 4 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLKHKPH*YFTQLI
Trigger: AATTAGCTGTGTGAAATACCAGTGTGGTTTGTGTTT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS TCA 90 bp GTGAACTCTCCAGCAGGGGAATGGCTGCACCTCACAGAGCCATTCTaGGGCTGGCGGACGGCCCTGCATGTCACAGCTTTACACGTTGGC +
Preference number: 5 (lower is better)
Translates to: VNSPAGEWLHLTEPF*GWRTALHVTALHVG
Trigger: GCCAACGTGTAAAGCTGTGACATGCAGGGCCGTCCGCCAGCCTCAGAATGGCTCTGTGAGGTGCAGCCATTCCCCTGCTGGAGAGTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS TCA 90 bp CAGACCAGTGTCCTGTGGCTCCACATGTCCGAGCTGCAGAGCCATTaGGCGTCCATCCTTCAGGACAGGCGAACTTGCACACAGTGCCAA +
Preference number: 5 (lower is better)
Translates to: QTSVLWLHMSELQSH*ASILQDRRTCTQCQ
Trigger: TTGGCACTGTGTGCAAGTTCGCCTGTCCTGAAGGATGGACGCTCAATGGCTCTGCAGCTCGGACATGTGGAGCCACAGGACACTGGTCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CCA 90 bp GATTTGCTGTGTCCACTGCCCTTGAGTGGTGCATTCAACCTGGGCTaGTCCCTGCAACATGAAGCCTTCCTCACAGGTGAAGTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: DLLCPLPLSGAFNLG*SLQHEAFLTGEVAG
Trigger: TCCTGCAACTTCACCTGTGAGGAAGGCTTCATGTTGCAGGGACCAGCCCAGGTTGAATGCACCACTCAAGGGCAGTGGACACAGCAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS TCA 90 bp TGGTCCCTGCAACATGAAGCCTTCCTCACAGGTGAAGTTGCAGGATaGTTTGAAGGTGAACTCTCCAGCAGGGGAATGGCTGCACCTCAC +
Preference number: 5 (lower is better)
Translates to: WSLQHEAFLTGEVAG*FEGELSSRGMAAPH
Trigger: GTGAGGTGCAGCCATTCCCCTGCTGGAGAGTTCACCTTCAAATCATCCTGCAACTTCACCTGTGAGGAAGGCTTCATGTTGCAGGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS TCA 90 bp CACTGGAAAGCTTCACAAACTGGGATTTGCTGTGTCCACTGCCCTTaGGTGGTGCATTCAACCTGGGCTGGTCCCTGCAACATGAAGCCT +
Preference number: 5 (lower is better)
Translates to: HWKASQTGICCVHCP*VVHSTWAGPCNMKP
Trigger: AGGCTTCATGTTGCAGGGACCAGCCCAGGTTGAATGCACCACTCAAGGGCAGTGGACACAGCAAATCCCAGTTTGTGAAGCTTTCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS TCA 90 bp ACTTGCACACAGTGCCAAACACGGGCTCCCCACTGCAGCTCATGTTaGTCTTTCCCGGAACTGCCAGGCTTGAACATTTTACCACTTGGC +
Preference number: 5 (lower is better)
Translates to: TCTQCQTRAPHCSSC*SFPELPGLNILPLG
Trigger: GCCAAGTGGTAAAATGTTCAAGCCTGGCAGTTCCGGGAAAGATCAACATGAGCTGCAGTGGGGAGCCCGTGTTTGGCACTGTGTGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS TCA 90 bp CATCTCACAGCTTCACAAACTGGGATTTGCTGTGTCCACTGCCCTTaGGTGGTGCATTCAACCTGGGCTGGTCCCTGCAACATGAAGCCT +
Preference number: 5 (lower is better)
Translates to: HLTASQTGICCVHCP*VVHSTWAGPCNMKP
Trigger: AGGCTTCATGTTGCAGGGACCAGCCCAGGTTGAATGCACCACTCAAGGGCAGTGGACACAGCAAATCCCAGTTTGTGAAGCTGTGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTTGGTCTCCATGCTGCTaGGCAGGTAACCCCTATCAC +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTWSPCC*AGNPYH
Trigger: GTGATAGGGGTTACCTGCCAAGCAGCATGGAGACCA...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCATGTGGGCTTCTCGTaGTCCCACTCCCCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHHVGFS*SHSPVG
Trigger: CCCCACAGGGGAGTGGGACAACGAGAAGCCCACATG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCCACTGCAGCTCATGTaGATCTTTCCCGGAACTGCC +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTPLQLM*IFPGTA
Trigger: GGCAGTTCCGGGAAAGATCAACATGAGCTGCAGTGG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS TCA 90 bp ACTTGCACACAGTGCCAAACACGGGCTCCCCACTGCAGCTCATGTTaGTCTTTCCCGGAACTGCCAGGCTTGAACATTTTACCACTTCAC +
Preference number: 5 (lower is better)
Translates to: TCTQCQTRAPHCSSC*SFPELPGLNILPLH
Trigger: GTGAAGTGGTAAAATGTTCAAGCCTGGCAGTTCCGGGAAAGATCAACATGAGCTGCAGTGGGGAGCCCGTGTTTGGCACTGTGTGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367774.1
ENST00000367777.5
CDS TCA 90 bp GGGAAGGGAAGGCATGCAGACCTGACTCTAATGCCAGCTAGGACGTaGGATGGTGCTACCATCTCAAGTGAAGAAAGAGGCAAGAACCAG +
Preference number: 5 (lower is better)
Translates to: GKGRHADLTLMPART*DGATISSEERGKNQ
Trigger: CTGGTTCTTGCCTCTTTCTTCACTTGAGATGGTAGCACCATCTCACGTCCTAGCTGGCATTAGAGTCAGGTCTGCATGCCTTCCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461085.1
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTACTGAGTCTTTTCAGTaGAAGGCCGTCCTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTTESFQ*KAVLAC
Trigger: GCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS TCA 90 bp CATTTTACCACTTCACAAACTGGGATTTGCTGTGTCCACTGCCCTTaGGTGGTGCATTCAACCTGGGCTGGTCCCTGCAACATGAAGCCT +
Preference number: 5 (lower is better)
Translates to: HFTTSQTGICCVHCP*VVHSTWAGPCNMKP
Trigger: AGGCTTCATGTTGCAGGGACCAGCCCAGGTTGAATGCACCACTCAAGGGCAGTGGACACAGCAAATCCCAGTTTGTGAAGTGGTAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367774.1
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCAGGTGTGTGTACCTTaGCTGACAATAAGCACTGGC +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTQVCVP*LTISTG
Trigger: GCCAGTGCTTATTGTCAGCAAAGGTACACACACCTG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAGGGCAAGCTTCTTCTaGCTGCACCTCTCATCATTC +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTRASFF*LHLSSF
Trigger: GAATGATGAGAGGTGCAGCAAGAAGAAGCTTGCCCT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCATTCCACGAACCCATaGGCTGGATTTGTCACAGCA +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTHSTNP*AGFVTA
Trigger: TGCTGTGACAAATCCAGCCAATGGGTTCGTGGAATG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCATGTGGGCTTCTCGTaGTCCCACTCCCCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQHVGFS*SHSPVG
Trigger: CCCCACAGGGGAGTGGGACAACGAGAAGCCCACATG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAACCTCTTCTGTCCATaGTCCCTGAGATGTGCACTC +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTNLFCP*SLRCAL
Trigger: GAGTGCACATCTCAGGGACAATGGACAGAAGAGGTT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCGAGCTGCAGAGCCATaGAGCGTCCATCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHRAAEP*SVHPSG
Trigger: TCCTGAAGGATGGACGCTCAATGGCTCTGCAGCTCG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCAACCCTCCATGCATTaGCCTGTGGGCATTCAACAT +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTQPSMH*PVGIQH
Trigger: ATGTTGAATGCCCACAGGCAAATGCATGGAGGGTTG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CCA 90 bp GGTTCACCTGGAGCCCAGTTCTTGGCTTCTTCTGTCAGAGGTTTCTaGGTTCCTACCCAGACCCACACATTGTTGACTTTTCTGATTCCA +
Preference number: 5 (lower is better)
Translates to: GSPGAQFLASSVRGF*VPTQTHTLLTFLIP
Trigger: TGGAATCAGAAAAGTCAACAATGTGTGGGTCTGGGTAGGAACCCAGAAACCTCTGACAGAAGAAGCCAAGAACTGGGCTCCAGGTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTGCAGTCCTCATCTTTTaGCCTATTGTTGGGTTCACC +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTAVLIF*PIVGFT
Trigger: GGTGAACCCAACAATAGGCAAAAAGATGAGGACTGC...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTGGTCTCCATGCTGCTaGGCAGGTAACCCCTATCAC +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHWSPCC*AGNPYH
Trigger: GTGATAGGGGTTACCTGCCAAGCAGCATGGAGACCA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTACCCATTGGCTGGATTaGTCACAGCATCACACTCAA +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTTHWLD*SQHHTQ
Trigger: TTGAGTGTGATGCTGTGACAAATCCAGCCAATGGGT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTCAGGACAGGCGAACTaGCACACAGTGCCAAACACG +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHSGQAN*HTVPNT
Trigger: CGTGTTTGGCACTGTGTGCAAGTTCGCCTGTCCTGA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CCA 90 bp ACTCCATTCTCCAGAGGACATACACTGCATGGTCTCCATGCTGCTTaGCAGGTAACCCCTATCACAGCTGATAGAGCAGGAAGAATTGTA +
Preference number: 5 (lower is better)
Translates to: TPFSRGHTLHGLHAA*QVTPITADRAGRIV
Trigger: TACAATTCTTCCTGCTCTATCAGCTGTGATAGGGGTTACCTGCCAAGCAGCATGGAGACCATGCAGTGTATGTCCTCTGGAGAATGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367776.5
ENST00000367777.5
CDS CCA 90 bp TGGGAAGCTTCCAGGGTTTTGGAAACATTCCACGAACCCATTGGCTaGATTTGTCACAGCATCACACTCAACCACATTGCAGGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: WEASRVLETFHEPIG*ICHSITLNHIAGWN
Trigger: ATTCCAGCCTGCAATGTGGTTGAGTGTGATGCTGTGACAAATCCAGCCAATGGGTTCGTGGAATGTTTCCAAAACCCTGGAAGCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAGTCAAATGTACAGGTaGTGTTCCATGGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTSQMYR*CSMGSF
Trigger: GAAGCTTCCCATGGAACACAACCTGTACATTTGACT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAAGTTGCAGGATGATTaGAAGGTGAACTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTKLQDD*KVNSPA
Trigger: TGCTGGAGAGTTCACCTTCAAATCATCCTGCAACTT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACTGTGTCCACTGCCCTaGAGTGGTGCATTCAACCTG +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPLCPLP*SGAFNL
Trigger: CAGGTTGAATGCACCACTCAAGGGCAGTGGACACAG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCCACATTGGAGCCTTTaGGATCCCTTCAACACAAAA +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTPHWSL*DPFNTK
Trigger: TTTTGTGTTGAAGGGATCCAAAAGGCTCCAATGTGG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCCGGAACTGCCAGGCTaGAACATTTTACCACTTGGC +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHPELPG*NILPLG
Trigger: GCCAAGTGGTAAAATGTTCAAGCCTGGCAGTTCCGG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATCAGGACAGGCGAACTaGCACACAGTGCCAAACACG +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPSGQAN*HTVPNT
Trigger: CGTGTTTGGCACTGTGTGCAAGTTCGCCTGTCCTGA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGCTACCAAGGGAATGTaGGACTCAGTGGGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHATKGM*DSVGAS
Trigger: TGAAGCTCCCACTGAGTCCAACATTCCCTTGGTAGC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CCA 90 bp CTTTCCGTTTTGGGAAGCAGTTGTTCAAACACAGGATCTCTCAGGTaGGTATCACTGCTGCCTCTGTCTCAGGTCAGTATAGGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: LSVLGSSCSNTGSLR*VSLLPLSQVSIGVL
Trigger: CAAAACTCCTATACTGACCTGAGACAGAGGCAGCAGTGATACCCACCTGAGAGATCCTGTGTTTGAACAACTGCTTCCCAAAACGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000609271.1
CDS CCA 90 bp TGGGAAGCTTCCAGGGTTTTGGAAACATTCCACGAACCCATTGGCTaGATTTGTCACAGCATCACACTCAACCATTTGCTCACACTTGAG +
Preference number: 5 (lower is better)
Translates to: WEASRVLETFHEPIG*ICHSITLNHLLTLE
Trigger: CTCAAGTGTGAGCAAATGGTTGAGTGTGATGCTGTGACAAATCCAGCCAATGGGTTCGTGGAATGTTTCCAAAACCCTGGAAGCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367775.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCAGACCCACACATTGTaGACTTTTCTGATTCCAATC +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTQTHTL*TFLIPI
Trigger: GATTGGAATCAGAAAAGTCAACAATGTGTGGGTCTG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTCTTTTTGCCTATTGTaGGGTTCACCTGGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHSFCLL*GSPGAQ
Trigger: CTGGGCTCCAGGTGAACCCAACAATAGGCAAAAAGA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTTGTACAGTTCACAATTaGCTCACACTTGAGTCCACT +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTCTVHN*LTLEST
Trigger: AGTGGACTCAAGTGTGAGCAAATTGTGAACTGTACA...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTCACACTCAACCACATaGCAGGCTGGAATAGGAGCA +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHSHSTT*QAGIGA
Trigger: TGCTCCTATTCCAGCCTGCAATGTGGTTGAGTGTGA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCATTCCACGAACCCATaGGCTGGATTTGTCACAGCA +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHHSTNP*AGFVTA
Trigger: TGCTGTGACAAATCCAGCCAATGGGTTCGTGGAATG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACACGTTGGCTTCTCGTaGTCCCAATTCCCAGATGAG +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPHVGFS*SQFPDE
Trigger: CTCATCTGGGAATTGGGACAACGAGAAGCCAACGTG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCTGTGTCCACTGCCCTaGAGTGGTGCATTCAACCTG +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQLCPLP*SGAFNL
Trigger: CAGGTTGAATGCACCACTCAAGGGCAGTGGACACAG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACCGGAACTGCCAGGCTaGAACATTTTACCACTTGGC +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPPELPG*NILPLG
Trigger: GCCAAGTGGTAAAATGTTCAAGCCTGGCAGTTCCGG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTAAGTGTAGGAGAGTTTaGATTCTCACACTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTKCRRV*ILTLLK
Trigger: CTTGAGGAGTGTGAGAATCAAAACTCTCCTACACTT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAACCATTTGCTCACACTaGAGTCCACTGAAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPTICSH*SPLKPG
Trigger: CCCTGGCTTCAGTGGACTCAAGTGTGAGCAAATGGT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367775.5
CDS TCA 90 bp TCAGGTCAGTATAGGAGTTTTGATGTGAAGTCAGCCAAGAACAGCTaGACACTACTTCGGCTGAGGCCCTTTTATAGGAGGGATTGCTTC +
Preference number: 5 (lower is better)
Translates to: SGQYRSFDVKSAKNS*TLLRLRPFYRRDCF
Trigger: GAAGCAATCCCTCCTATAAAAGGGCCTCAGCCGAAGTAGTGTTCAGCTGTTCTTGGCTGACTTCACATCAAAACTCCTATACTGACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609271.1
CDS GCA 90 bp ATGTATTGGTACAGGCAGCTGTGTAGCATAGGGCAAGCTTCTTCTTaGTGCACCTCTCATCATTCCACATGCCCACATCTTTTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: MYWYRQLCSIGQASS*CTSHHSTCPHLFLS
Trigger: AGAGAGAAAAAGATGTGGGCATGTGGAATGATGAGAGGTGCAGCAAGAAGAAGCTTGCCCTATGCTACACAGCTGCCTGTACCAATACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
ENST00000461085.1
CDS CCA 90 bp CAGTCAAATGTACAGGTTGTGTTCCATGGGAAGCTTCCAGGGTTTTaGAAACATTCCACGAACCCATTGGCTGGATTTGTCACAGCATCA +
Preference number: 5 (lower is better)
Translates to: QSNVQVVFHGKLPGF*KHSTNPLAGFVTAS
Trigger: TGATGCTGTGACAAATCCAGCCAATGGGTTCGTGGAATGTTTCCAAAACCCTGGAAGCTTCCCATGGAACACAACCTGTACATTTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CCA 90 bp AAGGCTTTTGGTAGCTTCCATCTGATTCAAGGCTTTGGCAGCTGCTaGCAGGAACAAATTTCTTTGCTTTCCGTAAGCATTTCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: KAFGSFHLIQGFGSC*QEQISLLSVSISEA
Trigger: GGCTTCGGAAATGCTTACGGAAAGCAAAGAAATTTGTTCCTGCCAGCAGCTGCCAAAGCCTTGAATCAGATGGAAGCTACCAAAAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATCTTTTTGCCTATTGTaGGGTTCACCTGGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPSFCLL*GSPGAQ
Trigger: CTGGGCTCCAGGTGAACCCAACAATAGGCAAAAAGA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATGCAGTCCTCATCTTTTaGCCTATTGTTGGGTTCACC +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHAVLIF*PIVGFT
Trigger: GGTGAACCCAACAATAGGCAAAAAGATGAGGACTGC...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATCACACTCAACCACATaGCAGGCTGGAATAGGAGCA +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPSHSTT*QAGIGA
Trigger: TGCTCCTATTCCAGCCTGCAATGTGGTTGAGTGTGA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATACCCATTGGCTGGATTaGTCACAGCATCACACTCAA +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHTHWLD*SQHHTQ
Trigger: TTGAGTGTGATGCTGTGACAAATCCAGCCAATGGGT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCACGTTGGCTTCTCGTaGTCCCAATTCCCAGATGAG +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQHVGFS*SQFPDE
Trigger: CTCATCTGGGAATTGGGACAACGAGAAGCCAACGTG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTCCTCACAGGTGAAGTaGCAGGATGATTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHSSQVK*QDDLKV
Trigger: CACCTTCAAATCATCCTGCAACTTCACCTGTGAGGA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATTCACAAACTGGGATTaGCTGTGTCCACTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPFTNWD*LCPLPL
Trigger: CAAGGGCAGTGGACACAGCAAATCCCAGTTTGTGAA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCGAGCTGCAGAGCCATaGAGCGTCCATCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLRAAEP*SVHPSG
Trigger: TCCTGAAGGATGGACGCTCAATGGCTCTGCAGCTCG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCGAGCTGCAGAGCCATaGAGCGTCCATCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILRAAEP*SVHPSG
Trigger: TCCTGAAGGATGGACGCTCAATGGCTCTGCAGCTCG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGGCTACCAAGGGAATGTaGGACTCAGTGGGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQATKGM*DSVGAS
Trigger: TGAAGCTCCCACTGAGTCCAACATTCCCTTGGTAGC...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTTTGGTCTCTTCACCTTaGCTTGGAAGAAAATATCCT +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTLVSSP*LGRKYP
Trigger: AGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAA...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTCCTACCACACTTGTATaGAATGAAGAAGTATGGAAG +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTPTTLV*NEEVWK
Trigger: CTTCCATACTTCTTCATTCAATACAAGTGTGGTAGG...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACCGGAACTGCCAGGCTaGAACATTTTACCACTTCAC +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPPELPG*NILPLH
Trigger: GTGAAGTGGTAAAATGTTCAAGCCTGGCAGTTCCGG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCAGGTGTGTGTACCTTaGCTGACAATAAGCACTGGC +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQQVCVP*LTISTG
Trigger: GCCAGTGCTTATTGTCAGCAAAGGTACACACACCTG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATACCCAGACCCACACATaGTTGACTTTTCTGATTCCA +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHTQTHT*LTFLIP
Trigger: TGGAATCAGAAAAGTCAACAATGTGTGGGTCTGGGT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTTGGTCTCCATGCTGCTaGGCAGGTAACCCCTATCAC +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILWSPCC*AGNPYH
Trigger: GTGATAGGGGTTACCTGCCAAGCAGCATGGAGACCA...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCATTCCACGAACCCATaGGCTGGATTTGTCACAGCA +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQHSTNP*AGFVTA
Trigger: TGCTGTGACAAATCCAGCCAATGGGTTCGTGGAATG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATAGTCAAATGTACAGGTaGTGTTCCATGGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHSQMYR*CSMGSF
Trigger: GAAGCTTCCCATGGAACACAACCTGTACATTTGACT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATAAGTTGCAGGATGATTaGAAGGTGAACTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHKLQDD*KVNSPA
Trigger: TGCTGGAGAGTTCACCTTCAAATCATCCTGCAACTT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATCCTCACAGGTGAAGTaGCAGGATGATTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPSSQVK*QDDLKV
Trigger: CACCTTCAAATCATCCTGCAACTTCACCTGTGAGGA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCTGTGTCCACTGCCCTaGAGTGGTGCATTCAACCTG +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILLCPLP*SGAFNL
Trigger: CAGGTTGAATGCACCACTCAAGGGCAGTGGACACAG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCCACATTGGAGCCTTTaGGATCCCTTCAACACAAAA +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHPHWSL*DPFNTK
Trigger: TTTTGTGTTGAAGGGATCCAAAAGGCTCCAATGTGG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGAACCTCTTCTGTCCATaGTCCCTGAGATGTGCACTC +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQNLFCP*SLRCAL
Trigger: GAGTGCACATCTCAGGGACAATGGACAGAAGAGGTT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCCACTGCAGCTCATGTaGATCTTTCCCGGAACTGCC +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLPLQLM*IFPGTA
Trigger: GGCAGTTCCGGGAAAGATCAACATGAGCTGCAGTGG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCCACTGCAGCTCATGTaGATCTTTCCCGGAACTGCC +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILPLQLM*IFPGTA
Trigger: GGCAGTTCCGGGAAAGATCAACATGAGCTGCAGTGG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGTCAGGACAGGCGAACTaGCACACAGTGCCAAACACG +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLSGQAN*HTVPNT
Trigger: CGTGTTTGGCACTGTGTGCAAGTTCGCCTGTCCTGA...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTTCAGGACAGGCGAACTaGCACACAGTGCCAAACACG +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILSGQAN*HTVPNT
Trigger: CGTGTTTGGCACTGTGTGCAAGTTCGCCTGTCCTGA...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCAACCCTCCATGCATTaGCCTGTGGGCATTCAACAT +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQQPSMH*PVGIQH
Trigger: ATGTTGAATGCCCACAGGCAAATGCATGGAGGGTTG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTATTAGTTCAAAACGTTaGGCCTCATGGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTISSKR*ASWKFF
Trigger: GAAAAACTTCCATGAGGCCAAACGTTTTGAACTAAT...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp AGGAAAGGGAACACTGAGTCTTTTCAGTTGAAGGCCGTCCTTGCCTGCTGGACTTATCACATCTCTGTTTaGACTGTTGGCTTTGTTGTT +
Preference number: 5 (lower is better)
Translates to: RKGNTESFQLKAVLACWTYHISV*TVGFVV
Trigger: AACAACAAAGCCAACAGTCAAAACAGAGATGTGATA...AGTCCAGCAGGCAAGGACGGCCTTCAACTGAAAAGACTCAGTGTTCCCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAACCCAGACCCACACATaGTTGACTTTTCTGATTCCA +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPTQTHT*LTFLIP
Trigger: TGGAATCAGAAAAGTCAACAATGTGTGGGTCTGGGT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGACCCATTGGCTGGATTaGTCACAGCATCACACTCAA +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQTHWLD*SQHHTQ
Trigger: TTGAGTGTGATGCTGTGACAAATCCAGCCAATGGGT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAAGTCAAATGTACAGGTaGTGTTCCATGGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPSQMYR*CSMGSF
Trigger: GAAGCTTCCCATGGAACACAACCTGTACATTTGACT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCACGTTGGCTTCTCGTaGTCCCAATTCCCAGATGAG +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLHVGFS*SQFPDE
Trigger: CTCATCTGGGAATTGGGACAACGAGAAGCCAACGTG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCACGTTGGCTTCTCGTaGTCCCAATTCCCAGATGAG +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILHVGFS*SQFPDE
Trigger: CTCATCTGGGAATTGGGACAACGAGAAGCCAACGTG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCCGGAACTGCCAGGCTaGAACATTTTACCACTTGGC +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILPELPG*NILPLG
Trigger: GCCAAGTGGTAAAATGTTCAAGCCTGGCAGTTCCGG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTGCTACCAAGGGAATGTaGGACTCAGTGGGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILATKGM*DSVGAS
Trigger: TGAAGCTCCCACTGAGTCCAACATTCCCTTGGTAGC...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAATCACACTCAACCATTaGCTCACACTTGAGTCCACT +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPITLNH*LTLEST
Trigger: AGTGGACTCAAGTGTGAGCAAATGGTTGAGTGTGAT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367775.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCGTTTTGGGAAGCAGTaGTTCAAACACAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQRFGKQ*FKHRIS
Trigger: AGAGATCCTGTGTTTGAACAACTGCTTCCCAAAACG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333360.12
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCAGGTGTGTGTACCTTaGCTGACAATAAGCACTGGC +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLQVCVP*LTISTG
Trigger: GCCAGTGCTTATTGTCAGCAAAGGTACACACACCTG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGTCTTTTTGCCTATTGTaGGGTTCACCTGGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLSFCLL*GSPGAQ
Trigger: CTGGGCTCCAGGTGAACCCAACAATAGGCAAAAAGA...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGTTCACAAACTGGGATTaGCTGTGTCCACTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLFTNWD*LCPLPL
Trigger: CAAGGGCAGTGGACACAGCAAATCCCAGTTTGTGAA...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGAACCTCTTCTGTCCATaGTCCCTGAGATGTGCACTC +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLNLFCP*SLRCAL
Trigger: GAGTGCACATCTCAGGGACAATGGACAGAAGAGGTT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTTGGTCTCTTCACCTTaGCTTGGAAGAAAATATCCT +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHLVSSP*LGRKYP
Trigger: AGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCAACCCTCCATGCATTaGCCTGTGGGCATTCAACAT +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLQPSMH*PVGIQH
Trigger: ATGTTGAATGCCCACAGGCAAATGCATGGAGGGTTG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATAATAAACATAAATGCTaGCTCACACAGGCATTCCTC +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHNKHKC*LTQAFL
Trigger: GAGGAATGCCTGTGTGAGCAAGCATTTATGTTTATT...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS TCA 90 bp CTTTTGAACTTAAAGGATGTAAGAAGGCTTTTGGTAGCTTCCATCTaGTTCAAGGCTTTGGCAGCTGCTGGCAGGAACAAATTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: LLNLKDVRRLLVASI*FKALAAAGRNKFLC
Trigger: GCAAAGAAATTTGTTCCTGCCAGCAGCTGCCAAAGCCTTGAATCAGATGGAAGCTACCAAAAGCCTTCTTACATCCTTTAAGTTCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAGAAATACTTTCCGTTTaGGGAAGCAGTTGTTCAAAC +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPEILSV*GSSCSN
Trigger: GTTTGAACAACTGCTTCCCAAAACGGAAAGTATTTC...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333360.12
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCTTCTTTGTTTTGAATaGCAACCAGGTGTGTGTACC +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQLLCFE*QPGVCT
Trigger: GGTACACACACCTGGTTGCAATTCAAAACAAAGAAG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATCAATCCAGTAATAACTaGGTGAATAGCTCAATATGG +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHQSSNN*VNSSIW
Trigger: CCATATTGAGCTATTCACCAAGTTATTACTGGATTG...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGTGTACAGTTCACAATTaGCTCACACTTGAGTCCACT +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQCTVHN*LTLEST
Trigger: AGTGGACTCAAGTGTGAGCAAATTGTGAACTGTACA...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333360.12
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTACCCATTGGCTGGATTaGTCACAGCATCACACTCAA +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILTHWLD*SQHHTQ
Trigger: TTGAGTGTGATGCTGTGACAAATCCAGCCAATGGGT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTTCCTCACAGGTGAAGTaGCAGGATGATTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILSSQVK*QDDLKV
Trigger: CACCTTCAAATCATCCTGCAACTTCACCTGTGAGGA...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATTGGTCTCTTCACCTTaGCTTGGAAGAAAATATCCT +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPLVSSP*LGRKYP
Trigger: AGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACCTACCACACTTGTATaGAATGAAGAAGTATGGAAG +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPPTTLV*NEEVWK
Trigger: CTTCCATACTTCTTCATTCAATACAAGTGTGGTAGG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGAAGTGTAGGAGAGTTTaGATTCTCACACTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQKCRRV*ILTLLK
Trigger: CTTGAGGAGTGTGAGAATCAAAACTCTCCTACACTT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CATTCAGTAGGATTTGCACCATTAACAACCCTCCATGCATTTGCCTGTGGGCATTATCACATCTCTGTTTaGACTGTTGGCTTTGTTGTT +
Preference number: 5 (lower is better)
Translates to: HSVGFAPLTTLHAFACGHYHISV*TVGFVV
Trigger: AACAACAAAGCCAACAGTCAAAACAGAGATGTGATA...ATGCCCACAGGCAAATGCATGGAGGGTTGTTAATGGTGCAAATCCTACTGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCACAATCCAGTAATAACTaGGTGAATAGCTCAATATGG +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPQSSNN*VNSSIW
Trigger: CCATATTGAGCTATTCACCAAGTTATTACTGGATTG...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGACCCAGACCCACACATaGTTGACTTTTCTGATTCCA +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLTQTHT*LTFLIP
Trigger: TGGAATCAGAAAAGTCAACAATGTGTGGGTCTGGGT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGAGTCAAATGTACAGGTaGTGTTCCATGGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLSQMYR*CSMGSF
Trigger: GAAGCTTCCCATGGAACACAACCTGTACATTTGACT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGAAGTTGCAGGATGATTaGAAGGTGAACTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLKLQDD*KVNSPA
Trigger: TGCTGGAGAGTTCACCTTCAAATCATCCTGCAACTT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGTTGGTCTCTTCACCTTaGCTTGGAAGAAAATATCCT +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQLVSSP*LGRKYP
Trigger: AGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAA...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCAATTAGTTCAAAACGTTaGGCCTCATGGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPISSKR*ASWKFF
Trigger: GAAAAACTTCCATGAGGCCAAACGTTTTGAACTAAT...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGAATAAACATAAATGCTaGCTCACACAGGCATTCCTC +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQNKHKC*LTQAFL
Trigger: GAGGAATGCCTGTGTGAGCAAGCATTTATGTTTATT...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CCTTATCACATCTCTGTTTTGACTGTTGGCTTTGTTGTTGCCAGTGTTCAGCCATATCACATCTCTGTTTaGACTGTTGGCTTTGTTGTT +
Preference number: 5 (lower is better)
Translates to: PYHISVLTVGFVVASVQPYHISV*TVGFVV
Trigger: AACAACAAAGCCAACAGTCAAAACAGAGATGTGATA...TGGCTGAACACTGGCAACAACAAAGCCAACAGTCAAAACAGAGATGTGATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCTTCTTTGTTTTGAATaGCAACCAGGTGTGTGTACC +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLLLCFE*QPGVCT
Trigger: GGTACACACACCTGGTTGCAATTCAAAACAAAGAAG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCTTCTTTGTTTTGAATaGCAACCAGGTGTGTGTACC +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILLLCFE*QPGVCT
Trigger: GGTACACACACCTGGTTGCAATTCAAAACAAAGAAG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp CTGAATCCCATAGGGATGAAAGTGATTAAATTGTGCATAGTAACCCTCGCACAGCAATCCAGTAATAACTaGGTGAATAGCTCAATATGG +
Preference number: 5 (lower is better)
Translates to: LNPIGMKVIKLCIVTLAQQSSNN*VNSSIW
Trigger: CCATATTGAGCTATTCACCAAGTTATTACTGGATTG...CTGTGCGAGGGTTACTATGCACAATTTAATCACTTTCATCCCTATGGGATTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCAGACCCACACATTGTaGACTTTTCTGATTCCAATC +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLQTHTL*TFLIPI
Trigger: GATTGGAATCAGAAAAGTCAACAATGTGTGGGTCTG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTCAGACCCACACATTGTaGACTTTTCTGATTCCAATC +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILQTHTL*TFLIPI
Trigger: GATTGGAATCAGAAAAGTCAACAATGTGTGGGTCTG...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGAAGTGTAGGAGAGTTTaGATTCTCACACTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLKCRRV*ILTLLK
Trigger: CTTGAGGAGTGTGAGAATCAAAACTCTCCTACACTT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS TCA 90 bp ATTGAATGTGTCCTGTGTGCCAGGCACCATGTAACCATGAGCCTATaGAGTTCACACTATTATTATCCTCATTTTACAATGAGAAAACTG +
Preference number: 5 (lower is better)
Translates to: IECVLCARHHVTMSL*SSHYYYPHFTMRKL
Trigger: CAGTTTTCTCATTGTAAAATGAGGATAATAATAGTGTGAACTTCATAGGCTCATGGTTACATGGTGCCTGGCACACAGGACACATTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461085.1
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGCCTACCACACTTGTATaGAATGAAGAAGTATGGAAG +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLPTTLV*NEEVWK
Trigger: CTTCCATACTTCTTCATTCAATACAAGTGTGGTAGG...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTAATAAACATAAATGCTaGCTCACACAGGCATTCCTC +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILNKHKC*LTQAFL
Trigger: GAGGAATGCCTGTGTGAGCAAGCATTTATGTTTATT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTATTAGTTCAAAACGTTaGGCCTCATGGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILISSKR*ASWKFF
Trigger: GAAAAACTTCCATGAGGCCAAACGTTTTGAACTAAT...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TTCAAAACGTTTGGCCTCATGGAAGTTTTTCATCGTGGAAACCACATATTTCTGATTAGTTCAAAACGTTaGGCCTCATGGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: FKTFGLMEVFHRGNHIFLISSKR*ASWKFF
Trigger: GAAAAACTTCCATGAGGCCAAACGTTTTGAACTAAT...CAGAAATATGTGGTTTCCACGATGAAAAACTTCCATGAGGCCAAACGTTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS-3UTR CAA 90 bp TCTGAGATTTCAGAGTCTTGGTCTCTTCACCTTTGCTTGGAAGAAAATATCCTTTATCACATCTCTGTTTaGACTGTTGGCTTTGTTGTT +
Preference number: 5 (lower is better)
Translates to: SEISESWSLHLCLEENILYHISV*TVGFVV
Trigger: AACAACAAAGCCAACAGTCAAAACAGAGATGTGATA...AAGGATATTTTCTTCCAAGCAAAGGTGAAGAGACCAAGACTCTGAAATCTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS GCA 72 bp GCCAGACCAGTGTCCTGTGGCTCCACATGTCCGAGCTaGAGAGCCATTGAGCGTCCATCCTTCAGGACAGGC +
Preference number: 6 (lower is better)
Translates to: ARPVSCGSTCPS*RAIERPSFRTG
Trigger: GCCTGTCCTGAAGGATGGACGCTCAATGGCTCTGCAGCTCGGACATGTGGAGCCACAGGACACTGGTCTGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CAA 72 bp GAGCCATTGAGCGTCCATCCTTCAGGACAGGCGAACTaGCACACAGTGCCAAACACGGGCTCCCCACTGCAG +
Preference number: 6 (lower is better)
Translates to: EPLSVHPSGQAN*HTVPNTGSPLQ
Trigger: CTGCAGTGGGGAGCCCGTGTTTGGCACTGTGTGCAAGTTCGCCTGTCCTGAAGGATGGACGCTCAATGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CAA 90 bp CGAGCTGCAGAGCCATTGAGCGTCCATCCTTCAGGACAGGCGAACTaGCACACAGTGCCAAACACGGGCTCCCCACTGCAGCTCATGTTG +
Preference number: 6 (lower is better)
Translates to: RAAEPLSVHPSGQAN*HTVPNTGSPLQLML
Trigger: CAACATGAGCTGCAGTGGGGAGCCCGTGTTTGGCACTGTGTGCAAGTTCGCCTGTCCTGAAGGATGGACGCTCAATGGCTCTGCAGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CAA 90 bp CCAGACCAGTGTCCTGTGGCTCCACATGTCCGAGCTGCAGAGCCATaGAGCGTCCATCCTTCAGGACAGGCGAACTTGCACACAGTGCCA +
Preference number: 6 (lower is better)
Translates to: PDQCPVAPHVRAAEP*SVHPSGQANLHTVP
Trigger: TGGCACTGTGTGCAAGTTCGCCTGTCCTGAAGGATGGACGCTCAATGGCTCTGCAGCTCGGACATGTGGAGCCACAGGACACTGGTCTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS TCA 72 bp GTCCTGTGGCTCCACATGTCCGAGCTGCAGAGCCATTaGGCGTCCATCCTTCAGGACAGGCGAACTTGCACA +
Preference number: 6 (lower is better)
Translates to: VLWLHMSELQSH*ASILQDRRTCT
Trigger: TGTGCAAGTTCGCCTGTCCTGAAGGATGGACGCTCAATGGCTCTGCAGCTCGGACATGTGGAGCCACAGGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CAA 72 bp GCATCGCATCTCACAGCTTCACATGTGGGCTTCTCGTaGTCCCACTCCCCTGTGGGGCCACATTGGAGCCTT +
Preference number: 6 (lower is better)
Translates to: ASHLTASHVGFS*SHSPVGPHWSL
Trigger: AAGGCTCCAATGTGGCCCCACAGGGGAGTGGGACAACGAGAAGCCCACATGTGAAGCTGTGAGATGCGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333360.12
CDS CAA 72 bp TGTCCTGTGGCTCCACATGTCCGAGCTGCAGAGCCATaGAGCGTCCATCCTTCAGGACAGGCGAACTTGCAC +
Preference number: 6 (lower is better)
Translates to: CPVAPHVRAAEP*SVHPSGQANLH
Trigger: GTGCAAGTTCGCCTGTCCTGAAGGATGGACGCTCAATGGCTCTGCAGCTCGGACATGTGGAGCCACAGGACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CAA 90 bp ACCTGGGCTGGTCCCTGCAACATGAAGCCTTCCTCACAGGTGAAGTaGCAGGATGATTTGAAGGTGAACTCTCCAGCAGGGGAATGGCTG +
Preference number: 6 (lower is better)
Translates to: TWAGPCNMKPSSQVK*QDDLKVNSPAGEWL
Trigger: CAGCCATTCCCCTGCTGGAGAGTTCACCTTCAAATCATCCTGCAACTTCACCTGTGAGGAAGGCTTCATGTTGCAGGGACCAGCCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CAA 90 bp GCACTGGAAAGCTTCACAAACTGGGATTTGCTGTGTCCACTGCCCTaGAGTGGTGCATTCAACCTGGGCTGGTCCCTGCAACATGAAGCC +
Preference number: 6 (lower is better)
Translates to: ALESFTNWDLLCPLP*SGAFNLGWSLQHEA
Trigger: GGCTTCATGTTGCAGGGACCAGCCCAGGTTGAATGCACCACTCAAGGGCAGTGGACACAGCAAATCCCAGTTTGTGAAGCTTTCCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS CAA 90 bp GCATCTCACAGCTTCACAAACTGGGATTTGCTGTGTCCACTGCCCTaGAGTGGTGCATTCAACCTGGGCTGGTCCCTGCAACATGAAGCC +
Preference number: 6 (lower is better)
Translates to: ASHSFTNWDLLCPLP*SGAFNLGWSLQHEA
Trigger: GGCTTCATGTTGCAGGGACCAGCCCAGGTTGAATGCACCACTCAAGGGCAGTGGACACAGCAAATCCCAGTTTGTGAAGCTGTGAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367775.5
ENST00000367776.5
CDS CAA 90 bp CCCTGCAACATGAAGCCTTCCTCACAGGTGAAGTTGCAGGATGATTaGAAGGTGAACTCTCCAGCAGGGGAATGGCTGCACCTCACAGAG +
Preference number: 6 (lower is better)
Translates to: PCNMKPSSQVKLQDD*KVNSPAGEWLHLTE
Trigger: CTCTGTGAGGTGCAGCCATTCCCCTGCTGGAGAGTTCACCTTCAAATCATCCTGCAACTTCACCTGTGAGGAAGGCTTCATGTTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS TCA 72 bp CAGTGCCAAACACGGGCTCCCCACTGCAGCTCATGTTaGTCTTTCCCGGAACTGCCAGGCTTGAACATTTTA +
Preference number: 6 (lower is better)
Translates to: QCQTRAPHCSSC*SFPELPGLNIL
Trigger: TAAAATGTTCAAGCCTGGCAGTTCCGGGAAAGATCAACATGAGCTGCAGTGGGGAGCCCGTGTTTGGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CCA 72 bp TCCAGAGGACATACACTGCATGGTCTCCATGCTGCTTaGCAGGTAACCCCTATCACAGCTGATAGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: SRGHTLHGLHAA*QVTPITADRAG
Trigger: TCCTGCTCTATCAGCTGTGATAGGGGTTACCTGCCAAGCAGCATGGAGACCATGCAGTGTATGTCCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367776.5
ENST00000367777.5
CDS CAA 72 bp GGTCCCTGCAACATGAAGCCTTCCTCACAGGTGAAGTaGCAGGATGATTTGAAGGTGAACTCTCCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: GPCNMKPSSQVK*QDDLKVNSPAG
Trigger: CCCTGCTGGAGAGTTCACCTTCAAATCATCCTGCAACTTCACCTGTGAGGAAGGCTTCATGTTGCAGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CAA 90 bp ACATTTTACCACTTCACAAACTGGGATTTGCTGTGTCCACTGCCCTaGAGTGGTGCATTCAACCTGGGCTGGTCCCTGCAACATGAAGCC +
Preference number: 6 (lower is better)
Translates to: TFYHFTNWDLLCPLP*SGAFNLGWSLQHEA
Trigger: GGCTTCATGTTGCAGGGACCAGCCCAGGTTGAATGCACCACTCAAGGGCAGTGGACACAGCAAATCCCAGTTTGTGAAGTGGTAAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367774.1
CDS TCA 72 bp AGGCATGCAGACCTGACTCTAATGCCAGCTAGGACGTaGGATGGTGCTACCATCTCAAGTGAAGAAAGAGGC +
Preference number: 6 (lower is better)
Translates to: RHADLTLMPART*DGATISSEERG
Trigger: GCCTCTTTCTTCACTTGAGATGGTAGCACCATCTCACGTCCTAGCTGGCATTAGAGTCAGGTCTGCATGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461085.1
CDS GCA 72 bp AATTCATGTAGCCTCGCTCGGGGTTGGACAAGGCTGTaGACTGGAAAGCTTCACAAACTGGGATTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: NSCSLARGWTRL*TGKLHKLGFAV
Trigger: CACAGCAAATCCCAGTTTGTGAAGCTTTCCAGTGCACAGCCTTGTCCAACCCCGAGCGAGGCTACATGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS CAA 72 bp ATGAAGCCTTCCTCACAGGTGAAGTTGCAGGATGATTaGAAGGTGAACTCTCCAGCAGGGGAATGGCTGCAC +
Preference number: 6 (lower is better)
Translates to: MKPSSQVKLQDD*KVNSPAGEWLH
Trigger: GTGCAGCCATTCCCCTGCTGGAGAGTTCACCTTCAAATCATCCTGCAACTTCACCTGTGAGGAAGGCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CAA 72 bp CAAGGCTGTGCACTGGAAAGCTTCACAAACTGGGATTaGCTGTGTCCACTGCCCTTGAGTGGTGCATTCAAC +
Preference number: 6 (lower is better)
Translates to: QGCALESFTNWD*LCPLPLSGAFN
Trigger: GTTGAATGCACCACTCAAGGGCAGTGGACACAGCAAATCCCAGTTTGTGAAGCTTTCCAGTGCACAGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000367777.5
CDS CAA 72 bp GACAGCATCGCATCTCACAGCTTCACAAACTGGGATTaGCTGTGTCCACTGCCCTTGAGTGGTGCATTCAAC +
Preference number: 6 (lower is better)
Translates to: DSIASHSFTNWD*LCPLPLSGAFN
Trigger: GTTGAATGCACCACTCAAGGGCAGTGGACACAGCAAATCCCAGTTTGTGAAGCTGTGAGATGCGATGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367775.5
ENST00000367776.5
CDS TCA 72 bp CAACATGAAGCCTTCCTCACAGGTGAAGTTGCAGGATaGTTTGAAGGTGAACTCTCCAGCAGGGGAATGGCT +
Preference number: 6 (lower is better)
Translates to: QHEAFLTGEVAG*FEGELSSRGMA
Trigger: AGCCATTCCCCTGCTGGAGAGTTCACCTTCAAATCATCCTGCAACTTCACCTGTGAGGAAGGCTTCATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS TCA 72 bp CTGCCTCTGTCTCAGGTCAGTATAGGAGTTTTGATGTaGAGTCAGCCAAGAACAGCTGAACACTACTTCGGC +
Preference number: 6 (lower is better)
Translates to: LPLSQVSIGVLM*SQPRTAEHYFG
Trigger: GCCGAAGTAGTGTTCAGCTGTTCTTGGCTGACTTCACATCAAAACTCCTATACTGACCTGAGACAGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609271.1
CDS CCA 72 bp TTGGGAAGCAGTTGTTCAAACACAGGATCTCTCAGGTaGGTATCACTGCTGCCTCTGTCTCAGGTCAGTATA +
Preference number: 6 (lower is better)
Translates to: LGSSCSNTGSLR*VSLLPLSQVSI
Trigger: TATACTGACCTGAGACAGAGGCAGCAGTGATACCCACCTGAGAGATCCTGTGTTTGAACAACTGCTTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333360.12
ENST00000609271.1
CDS CCA 72 bp GTACAGGTTGTGTTCCATGGGAAGCTTCCAGGGTTTTaGAAACATTCCACGAACCCATTGGCTGGATTTGTC +
Preference number: 6 (lower is better)
Translates to: VQVVFHGKLPGF*KHSTNPLAGFV
Trigger: GACAAATCCAGCCAATGGGTTCGTGGAATGTTTCCAAAACCCTGGAAGCTTCCCATGGAACACAACCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CAA 72 bp GGTTTTGGAAACATTCCACGAACCCATTGGCTGGATTaGTCACAGCATCACACTCAACCACATTGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: GFGNIPRTHWLD*SQHHTQPHCRL
Trigger: CAGCCTGCAATGTGGTTGAGTGTGATGCTGTGACAAATCCAGCCAATGGGTTCGTGGAATGTTTCCAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367776.5
ENST00000367777.5
CDS CAA 72 bp AGAAAGAGGCAAGAACCAGACTTACTTTGCTCACACTaGAGTCCACTGAAGCCAGGGTCACACTTGCAAGTG +
Preference number: 6 (lower is better)
Translates to: RKRQEPDLLCSH*SPLKPGSHLQV
Trigger: CACTTGCAAGTGTGACCCTGGCTTCAGTGGACTCAAGTGTGAGCAAAGTAAGTCTGGTTCTTGCCTCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461085.1
CDS CAA 90 bp ACAGTCAAATGTACAGGTTGTGTTCCATGGGAAGCTTCCAGGGTTTaGGAAACATTCCACGAACCCATTGGCTGGATTTGTCACAGCATC +
Preference number: 6 (lower is better)
Translates to: TVKCTGCVPWEASRV*ETFHEPIGWICHSI
Trigger: GATGCTGTGACAAATCCAGCCAATGGGTTCGTGGAATGTTTCCAAAACCCTGGAAGCTTCCCATGGAACACAACCTGTACATTTGACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CCA 72 bp TCCAGGGTTTTGGAAACATTCCACGAACCCATTGGCTaGATTTGTCACAGCATCACACTCAACCACATTGCA +
Preference number: 6 (lower is better)
Translates to: SRVLETFHEPIG*ICHSITLNHIA
Trigger: TGCAATGTGGTTGAGTGTGATGCTGTGACAAATCCAGCCAATGGGTTCGTGGAATGTTTCCAAAACCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367776.5
ENST00000367777.5
CDS CAA 72 bp AAGCTTCCAGGGTTTTGGAAACATTCCACGAACCCATaGGCTGGATTTGTCACAGCATCACACTCAACCACA +
Preference number: 6 (lower is better)
Translates to: KLPGFWKHSTNP*AGFVTASHSTT
Trigger: TGTGGTTGAGTGTGATGCTGTGACAAATCCAGCCAATGGGTTCGTGGAATGTTTCCAAAACCCTGGAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367776.5
ENST00000367777.5
CDS CAA 72 bp GGTTTTGGAAACATTCCACGAACCCATTGGCTGGATTaGTCACAGCATCACACTCAACCATTTGCTCACACT +
Preference number: 6 (lower is better)
Translates to: GFGNIPRTHWLD*SQHHTQPFAHT
Trigger: AGTGTGAGCAAATGGTTGAGTGTGATGCTGTGACAAATCCAGCCAATGGGTTCGTGGAATGTTTCCAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367775.5
CDS CAA 72 bp AAGCTTCCAGGGTTTTGGAAACATTCCACGAACCCATaGGCTGGATTTGTCACAGCATCACACTCAACCATT +
Preference number: 6 (lower is better)
Translates to: KLPGFWKHSTNP*AGFVTASHSTI
Trigger: AATGGTTGAGTGTGATGCTGTGACAAATCCAGCCAATGGGTTCGTGGAATGTTTCCAAAACCCTGGAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367775.5
CDS TCA 72 bp TTAAAGGATGTAAGAAGGCTTTTGGTAGCTTCCATCTaGTTCAAGGCTTTGGCAGCTGCTGGCAGGAACAAA +
Preference number: 6 (lower is better)
Translates to: LKDVRRLLVASI*FKALAAAGRNK
Trigger: TTTGTTCCTGCCAGCAGCTGCCAAAGCCTTGAATCAGATGGAAGCTACCAAAAGCCTTCTTACATCCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS CAA 90 bp CTCAATCTCTTCTTTGTTTTGAATTGCAACCAGGTGTGTGTACCTTaGCTGACAATAAGCACTGGCCTCATCATAAGTCATAGCTTCCGT +
Preference number: 6 (lower is better)
Translates to: LNLFFVLNCNQVCVP*LTISTGLIISHSFR
Trigger: ACGGAAGCTATGACTTATGATGAGGCCAGTGCTTATTGTCAGCAAAGGTACACACACCTGGTTGCAATTCAAAACAAAGAAGAGATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5
CDS TCA 72 bp GTCCTGTGTGCCAGGCACCATGTAACCATGAGCCTATaGAGTTCACACTATTATTATCCTCATTTTACAATG +
Preference number: 6 (lower is better)
Translates to: VLCARHHVTMSL*SSHYYYPHFTM
Trigger: CATTGTAAAATGAGGATAATAATAGTGTGAACTTCATAGGCTCATGGTTACATGGTGCCTGGCACACAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461085.1
CDS CAA 72 bp TTCTTTGTTTTGAATTGCAACCAGGTGTGTGTACCTTaGCTGACAATAAGCACTGGCCTCATCATAAGTCAT +
Preference number: 6 (lower is better)
Translates to: FFVLNCNQVCVP*LTISTGLIISH
Trigger: ATGACTTATGATGAGGCCAGTGCTTATTGTCAGCAAAGGTACACACACCTGGTTGCAATTCAAAACAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333360.12
ENST00000367774.1
ENST00000367775.5
ENST00000367776.5
ENST00000367777.5