RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEL1L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000101251

Ensembl transcript IDs: ENST00000284951.10, ENST00000378072.5, ENST00000423870.6, ENST00000475649.5, ENST00000476952.1, ENST00000477435.1, ENST00000482196.5, ENST00000486903.5, ENST00000492548.1, ENST00000646153.1

Found 330 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTCTAGGATGGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTaGGCGGGAAACTGCAGCGGACTCTTGATTTGGATGGGAAACTGT +
Preference number: 1 (lower is better)
Translates to: SLGWSPSLVCFPSQP*AGNCSGLLIWMGNC
Trigger: ACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACCATCCTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
3UTR CCA 90 bp AGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTaGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTG +
Preference number: 1 (lower is better)
Translates to: SFQFHDGKEHRYVGI*TRLSSHVVQSSGQV
Trigger: CACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAACTGGAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
3UTR TCA 90 bp TCTGTTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGGACTCTTaGTTTGGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGT +
Preference number: 1 (lower is better)
Translates to: SVSHHSPERETAADS*FGWETVYLVGIPWS
Trigger: ACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
3UTR GCA 90 bp TTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTaGTGTTTGATAGTCTTTCTTAGTCCCATAGCCATAGTAATGGTA +
Preference number: 1 (lower is better)
Translates to: LRVVVFVGCNAVVCG*CLIVFLSPIAIVMV
Trigger: TACCATTACTATGGCTATGGGACTAAGAAAGACTATCAAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
3UTR GCA 90 bp ATAAGCCAGATTGAACATGGCTTGCGCGTTGTGGTATTTGTTGGCTaGAATGCTGTAGTGTGTGGCTGCTGTTTGATAGTCTTTCTTAGT +
Preference number: 1 (lower is better)
Translates to: ISQIEHGLRVVVFVG*NAVVCGCCLIVFLS
Trigger: ACTAAGAAAGACTATCAAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCCATGTTCAATCTGGCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
3UTR TCA 90 bp CTTTCTTGTAATAACTTAGGGCAACTTCACAATTCTGTAGAACATTaGTTCCCGACAAATATCTGTACCCCAAAATCATCTGGGACATCA +
Preference number: 1 (lower is better)
Translates to: LSCNNLGQLHNSVEH*FPTNICTPKSSGTS
Trigger: TGATGTCCCAGATGATTTTGGGGTACAGATATTTGTCGGGAATCAATGTTCTACAGAATTGTGAAGTTGCCCTAAGTTATTACAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423870.6
3UTR GCA 90 bp AGAAGTAGTGTAATGCTTTGTAGTAATCCTGATCTAGACCTTTCCTaGCAATTAGATGTAATTGTCCAAGAGAGACTTGTATCTGAACAT +
Preference number: 1 (lower is better)
Translates to: RSSVMLCSNPDLDLS*QLDVIVQERLVSEH
Trigger: ATGTTCAGATACAAGTCTCTCTTGGACAATTACATCTAATTGGCAGGAAAGGTCTAGATCAGGATTACTACAAAGCATTACACTACTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
3UTR-3UTR TCA 90 bp CCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGGACGGGGATACCTTGGAGTaGACTGATTCCCGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: PQVLSVSHHSPERETAADGDTLE*TDSREQ
Trigger: CTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCC...GTCCGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
3UTR-3UTR TCA 90 bp GTGATCCGCATCCTACCCATGGTGATTTCTAAGCAACAAAATCAGCCCAGGAACGGGGATACCTTGGAGTaGACTGATTCCCGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: VIRILPMVISKQQNQPRNGDTLE*TDSREQ
Trigger: CTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCC...GTTCCTGGGCTGATTTTGTTGCTTAGAAATCACCATGGGTAGGATGCGGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
3UTR-3UTR GCA 90 bp TATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAAAATGCCATGGCATTTaGACTCCCGGCCTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: YVGIWTRLSSHVVQSSGQKCHGI*TPGLCC
Trigger: GCAGCAAAGGCCGGGAGTGCAAATGCCATGGCATTT...TTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423870.6
3UTR CAA 90 bp TTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTaGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTGAATGTCCTT +
Preference number: 2 (lower is better)
Translates to: FHDGKEHRYVGIWTR*SSHVVQSSGQVNVL
Trigger: AAGGACATTCACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
3UTR-3UTR TCA 90 bp GCTGTAGTGTGTGGCTGCTGTTTGATAGTCTTTCTTAGTCCCATAGCCATAGTAGGGGATACCTTGGAGTaGACTGATTCCCGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: AVVCGCCLIVFLSPIAIVGDTLE*TDSREQ
Trigger: CTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCC...TACTATGGCTATGGGACTAAGAAAGACTATCAAACAGCAGCCACACACTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
3UTR-3UTR TCA 90 bp TATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAACACAGCAGTTCTGCATaGTCTTACTACTCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: YVGIWTRLSSHVVQSSGQHSSSA*SYYSCS
Trigger: GGAACAGGAGTAGTAAGATCATGCAGAACTGCTGTG...TTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
3UTR-3UTR CCA 90 bp AAGTCCCAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTTTAGTGGGGATACCTTaGAGTGAACTGATTCCCGTG +
Preference number: 2 (lower is better)
Translates to: KSQCGPMVLSSFSQFHLVLVGIP*SELIPV
Trigger: CACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA...AACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
3UTR-3UTR GCA 90 bp TATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAAGATTGAACATGGCTTaGGCGTTGTGGTATTTGTTG +
Preference number: 2 (lower is better)
Translates to: YVGIWTRLSSHVVQSSGQRLNMA*ALWYLL
Trigger: CAACAAATACCACAACGCGCAAGCCATGTTCAATCT...TTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
3UTR-3UTR GCA 90 bp CCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTATGTGAGATTGAACATGGCTTaGGCGTTGTGGTATTTGTTG +
Preference number: 2 (lower is better)
Translates to: PEQMRSFQFHDGKEHRYVRLNMA*ALWYLL
Trigger: CAACAAATACCACAACGCGCAAGCCATGTTCAATCT...CACATACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
3UTR-3UTR CCA 90 bp TTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTGAATGTCCTTTGTGATGCCATGCATTGCCTTGAATaGCAGCTCGATTCCATAGGA +
Preference number: 2 (lower is better)
Translates to: LSSHVVQSSGQVNVLCDAMHCLE*QLDSIG
Trigger: TCCTATGGAATCGAGCTGCCATTCAAGGCAATGCAT...GGCATCACAAAGGACATTCACTTGGCCAGAAGATTGTACGACATGGCTGCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
3UTR-3UTR CCA 90 bp GTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTGAAATTATGGCTTGCGCGTTGTaGTATTTGTTGGCTGCAATG +
Preference number: 2 (lower is better)
Translates to: VWSNGVVQFQPVPSRCEIMACAL*YLLAAM
Trigger: CATTGCAGCCAACAAATACCACAACGCGCAAGCCAT...AATTTCACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
3UTR CAA 90 bp GTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTaGATAGTCTTTCTTAGTCCCATAGCCATAGTAATGGTAATCTCC +
Preference number: 2 (lower is better)
Translates to: VVVFVGCNAVVCGCC*IVFLSPIAIVMVIS
Trigger: GGAGATTACCATTACTATGGCTATGGGACTAAGAAAGACTATCAAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
3UTR-3UTR GCA 90 bp AGAATCTATATCACCATCCTTATAGGCAAAGTAAGCTGTCAGGAATTTCTCAGCGCTCCACAGCAGTTCTaGATGATCTTACTACTCCTG +
Preference number: 2 (lower is better)
Translates to: RIYITILIGKVSCQEFLSAPQQF*MILLLL
Trigger: CAGGAGTAGTAAGATCATGCAGAACTGCTGTGGAGC...GCTGAGAAATTCCTGACAGCTTACTTTGCCTATAAGGATGGTGATATAGATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
3UTR-3UTR CCA 90 bp AGAATCTATATCACCATCCTTATAGGCAAAGTAAGCTGTCAGGAATTTCTCAGCTACCCCAAAATCATCTaGGACATCATGTTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: RIYITILIGKVSCQEFLSYPKII*DIMFPP
Trigger: TGGAGGAAACATGATGTCCCAGATGATTTTGGGGTA...GCTGAGAAATTCCTGACAGCTTACTTTGCCTATAAGGATGGTGATATAGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423870.6
3UTR-3UTR CCA 90 bp AGAATCTATATCACCATCCTTATAGGCAAAGTAAGCTGTCAGGAATTTCTCAGCCTGTTGCATACATCTTaGCCAGATAATAAATGGCAA +
Preference number: 2 (lower is better)
Translates to: RIYITILIGKVSCQEFLSLLHTS*PDNKWQ
Trigger: TTGCCATTTATTATCTGGCCAAGATGTATGCAACAG...GCTGAGAAATTCCTGACAGCTTACTTTGCCTATAAGGATGGTGATATAGATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
3UTR TCA 72 bp TGGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTaGGCGGGAAACTGCAGCGGACTCTTGATTTGGATG +
Preference number: 3 (lower is better)
Translates to: WSPSLVCFPSQP*AGNCSGLLIWM
Trigger: CATCCAAATCAAGAGTCCGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
3UTR-3UTR CAA 90 bp TTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTTGGCCCATGAAGGCCGATaGCATTGCCCTTACTGGCTG +
Preference number: 3 (lower is better)
Translates to: LRVVVFVGCNAVVCGCCLAHEGR*HCPYWL
Trigger: CAGCCAGTAAGGGCAATGCAATCGGCCTTCATGGGC...CAAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
3UTR CCA 72 bp TTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTaGACTCGTTTGAGCAGCCATGTCGTACAATCTTCT +
Preference number: 3 (lower is better)
Translates to: FHDGKEHRYVGI*TRLSSHVVQSS
Trigger: AGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
3UTR-3UTR CAA 90 bp GTCCCAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTTATCAGTGCCTTAGCTaGATCATATTCCATTCCTAT +
Preference number: 3 (lower is better)
Translates to: VPVWSNGVVQFQPVPSRCYQCLS*IIFHSY
Trigger: ATAGGAATGGAATATGATCAAGCTAAGGCACTGATA...ACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
3UTR-3UTR CAA 90 bp CCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTATGTGATAGGAGAAGCGCCATaGGATACATCTTCTCTTTTT +
Preference number: 3 (lower is better)
Translates to: PEQMRSFQFHDGKEHRYVIGEAP*DTSSLF
Trigger: AAAAAGAGAAGATGTATCCAATGGCGCTTCTCCTAT...CACATACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000475649.5
3UTR GCA 72 bp GTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTaGTGTTTGATAGTCTTTCTTAGTCCCATAGCCATA +
Preference number: 3 (lower is better)
Translates to: VVFVGCNAVVCG*CLIVFLSPIAI
Trigger: TATGGCTATGGGACTAAGAAAGACTATCAAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
3UTR CCA 72 bp TTTGGATGGGAAACTGTTTATTTAGTGGGGATACCTTaGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGT +
Preference number: 3 (lower is better)
Translates to: FGWETVYLVGIP*SELIPVSRFSC
Trigger: ACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
3UTR GCA 72 bp GTTCACAGACACCTTTATAAAGCTCCACAGCAGTTCTaGATGATCTTACTACTCCTGTTCCTGTTGCATACA +
Preference number: 3 (lower is better)
Translates to: VHRHLYKAPQQF*MILLLLFLLHT
Trigger: TGTATGCAACAGGAACAGGAGTAGTAAGATCATGCAGAACTGCTGTGGAGCTTTATAAAGGTGTCTGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
3UTR TCA 72 bp ACAGACACCTTTATAAAGCTCCACAGCAGTTCTGCATaGTCTTACTACTCCTGTTCCTGTTGCATACATCTT +
Preference number: 3 (lower is better)
Translates to: TDTFIKLHSSSA*SYYSCSCCIHL
Trigger: AAGATGTATGCAACAGGAACAGGAGTAGTAAGATCATGCAGAACTGCTGTGGAGCTTTATAAAGGTGTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
3UTR-3UTR CAA 90 bp AGAATCTATATCACCATCCTTATAGGCAAAGTAAGCTGTCAGGAATTTCTCAGCTTGTCCAAGAGAGACTaGTATCTGAACATCTCCTCT +
Preference number: 3 (lower is better)
Translates to: RIYITILIGKVSCQEFLSLSKRD*YLNISS
Trigger: AGAGGAGATGTTCAGATACAAGTCTCTCTTGGACAA...GCTGAGAAATTCCTGACAGCTTACTTTGCCTATAAGGATGGTGATATAGATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
3UTR TCA 72 bp AATAACTTAGGGCAACTTCACAATTCTGTAGAACATTaGTTCCCGACAAATATCTGTACCCCAAAATCATCT +
Preference number: 3 (lower is better)
Translates to: NNLGQLHNSVEH*FPTNICTPKSS
Trigger: AGATGATTTTGGGGTACAGATATTTGTCGGGAATCAATGTTCTACAGAATTGTGAAGTTGCCCTAAGTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR TCA 90 bp CCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGGACGAGCAGGTTTTCCTGTaGTCCGCATCCTACCCATGG +
Preference number: 4 (lower is better)
Translates to: PQVLSVSHHSPERETAADEQVFL*SASYPW
Trigger: CCATGGGTAGGATGCGGATCACAGGAAAACCTGCTC...GTCCGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR GCA 90 bp GGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGGCAGTAGCGTTATTTTaGGGCACGGCAGCATTCCCC +
Preference number: 4 (lower is better)
Translates to: GPQVLSVSHHSPERETAAAVALF*GTAAFP
Trigger: GGGGAATGCTGCCGTGCCGCAAAATAACGCTACTGC...CGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp TGTTTCTCTAGGATGGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCTTCCCATCACAGCCCTaGGCGGGAAACTGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: CFSRMVPKSCLFPITALSFPSQP*AGNCSG
Trigger: TCCGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAA...GCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACCATCCTAGAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp GGCTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTACGGACAATTCGTGTTaGCCCTCGGTCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GLRVVVFVGCNAVVCGCCTDNSC*PSVSSH
Trigger: GTGGGAGGAGACCGAGGGTCAACACGAATTGTCCGT...ACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486903.5
CDS-3UTR GCA 90 bp TTCTCTAGGATGGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGGCCCATGAAGGCCGATTaGATTGCCCTTACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FSRMVPKSCLFPITALSGPMKAD*IALTGC
Trigger: GCAGCCAGTAAGGGCAATGCAATCGGCCTTCATGGG...CCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACCATCCTAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp GGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGGCAAATGCATTGCCTTaGATGGCAGCTCGATTCCAT +
Preference number: 4 (lower is better)
Translates to: GPQVLSVSHHSPERETAAANALP*MAARFH
Trigger: ATGGAATCGAGCTGCCATTCAAGGCAATGCATTTGC...CGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp GTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGGAGCAGGTTTTCCTGTaGTCCGCATCCTACCCATGG +
Preference number: 4 (lower is better)
Translates to: VGIPWSELIPVSRFSCDPEQVFL*SASYPW
Trigger: CCATGGGTAGGATGCGGATCACAGGAAAACCTGCTC...CGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp CACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTCATCCTCCAAGTCCCTaGGGCGGCTTTCCGCTAGCT +
Preference number: 4 (lower is better)
Translates to: HRYVGIWTRLSSHVVQSSHPPSP*GGFPLA
Trigger: AGCTAGCGGAAAGCCGCCTCAGGGACTTGGAGGATG...AGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486903.5
CDS-3UTR GCA 90 bp GTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGGCAGTAGCGTTATTTTaGGGCACGGCAGCATTCCCC +
Preference number: 4 (lower is better)
Translates to: VGIPWSELIPVSRFSCDPAVALF*GTAAFP
Trigger: GGGGAATGCTGCCGTGCCGCAAAATAACGCTACTGC...CGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp CATGGCTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCCCCATGAAGGCCGATTaGATTGCCCTTACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: HGLRVVVFVGCNAVVCGCPMKAD*IALTGC
Trigger: GCAGCCAGTAAGGGCAATGCAATCGGCCTTCATGGG...GCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp GGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGGCTCCACAGCAGTTCTaGATGATCTTACTACTCCTG +
Preference number: 4 (lower is better)
Translates to: GPQVLSVSHHSPERETAAAPQQF*MILLLL
Trigger: CAGGAGTAGTAAGATCATGCAGAACTGCTGTGGAGC...CGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CCA 90 bp GGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGCAGAAACTAGGTGATTaGCCCAAGAGCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPQVLSVSHHSPERETAAQKLGD*PKSSSS
Trigger: AGAAGAGGAGCTCTTGGGCCAATCACCTAGTTTCTG...CGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CCA 90 bp GGCTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTCTCTTGGGCAGAAGCTaGAGCAGAGTAGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GLRVVVFVGCNAVVCGCCLLGRS*SRVVQA
Trigger: TGCCTGGACTACTCTGCTCCAGCTTCTGCCCAAGAG...ACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR CCA 90 bp CAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTGAAAGTCACTTGGCGCACCTaGCTCTACAGGCCACGCCCT +
Preference number: 4 (lower is better)
Translates to: QCGPMVLSSFSQFHLVVKVTWRT*LYRPRP
Trigger: AGGGCGTGGCCTGTAGAGCCAGGTGCGCCAAGTGAC...TTTCACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486903.5
CDS-3UTR TCA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATGAGCAGGTTTTCCTGTaGTCCGCATCCTACCCATGG +
Preference number: 4 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHEQVFL*SASYPW
Trigger: CCATGGGTAGGATGCGGATCACAGGAAAACCTGCTC...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp GTCCCAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTGAGCAGGTTTTCCTGTaGTCCGCATCCTACCCATGG +
Preference number: 4 (lower is better)
Translates to: VPVWSNGVVQFQPVPSRCEQVFL*SASYPW
Trigger: CCATGGGTAGGATGCGGATCACAGGAAAACCTGCTC...ACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp GAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTGGGGATACCTTGGAGTaGACTGATTCCCGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: EHRYVGIWTRLSSHVVQSGDTLE*TDSREQ
Trigger: CTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCC...AGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR GCA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATGCAGTAGCGTTATTTTaGGGCACGGCAGCATTCCCC +
Preference number: 4 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHAVALF*GTAAFP
Trigger: GGGGAATGCTGCCGTGCCGCAAAATAACGCTACTGC...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp CAGTTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCCCCATGAAGGCCGATTaGATTGCCCTTACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QFHDGKEHRYVGIWTRLSPMKAD*IALTGC
Trigger: GCAGCCAGTAAGGGCAATGCAATCGGCCTTCATGGG...GCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGTACATGAAGCCTAACTaGAACTGTGCGTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: VGIPWSELIPVSRFSCDPYMKPN*NCASGH
Trigger: GTGGCCCGACGCACAGTTCCAGTTAGGCTTCATGTA...CGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp GTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCCCAGTGTGGTCCAATaGTGTTGTCCAGTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VGIPWSELIPVSRFSCDPPSVVQ*CCPVSA
Trigger: GGCTGAAACTGGACAACACCATTGGACCACACTGGG...CGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp CAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTGAAAAGCTCGCCTGTCACTTaGCGCACCTGGCTCTACAGG +
Preference number: 4 (lower is better)
Translates to: QCGPMVLSSFSQFHLVVKSSPVT*RTWLYR
Trigger: CCTGTAGAGCCAGGTGCGCCAAGTGACAGGCGAGCT...TTTCACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486903.5
3UTR CAA 72 bp GGCAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTaGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: GKEHRYVGIWTR*SSHVVQSSGQV
Trigger: CACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR GCA 90 bp CAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAAAATGCCATGGCATTTaGACTCCCGGCCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QRAQVCGHLDSFEQPCRTKCHGI*TPGLCC
Trigger: GCAGCAAAGGCCGGGAGTGCAAATGCCATGGCATTT...TGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp CCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGGACATTGCCCTTACTGGCTaGCATGGAAAAGTACTTGAA +
Preference number: 4 (lower is better)
Translates to: PQVLSVSHHSPERETAADIALTG*HGKVLE
Trigger: TTCAAGTACTTTTCCATGGCAGCCAGTAAGGGCAAT...GTCCGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp TTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATAGAAGACCAAGCCCATaGAGGCCGATTGCATTGCCC +
Preference number: 4 (lower is better)
Translates to: LVGIPWSELIPVSRFSCDRRPSP*RPIALP
Trigger: GGGCAATGCAATCGGCCTTCATGGGCTTGGTCTTCT...ATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp TTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTGAATGTCCTTTGTGATGCCAGAAGACCAAGCCCATaGAGGCCGATTGCATTGCCC +
Preference number: 4 (lower is better)
Translates to: LSSHVVQSSGQVNVLCDARRPSP*RPIALP
Trigger: GGGCAATGCAATCGGCCTTCATGGGCTTGGTCTTCT...GGCATCACAAAGGACATTCACTTGGCCAGAAGATTGTACGACATGGCTGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp CCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGGACAATGCTGAATTGCTTTaGGCTACTTCATACCCCATT +
Preference number: 4 (lower is better)
Translates to: PQVLSVSHHSPERETAADNAELL*ATSYPI
Trigger: AATGGGGTATGAAGTAGCTCAAAGCAATTCAGCATT...GTCCGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATGCATCTGGACTCGTTTaGGCAGCCATGTCGTACAAT +
Preference number: 4 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHASGLV*AAMSYN
Trigger: ATTGTACGACATGGCTGCTCAAACGAGTCCAGATGC...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp CAAATAAGTCCCAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCGAGCAGGTTTTCCTGTaGTCCGCATCCTACCCATGG +
Preference number: 4 (lower is better)
Translates to: QISPSVVQWCCPVSASSIEQVFL*SASYPW
Trigger: CCATGGGTAGGATGCGGATCACAGGAAAACCTGCTC...GATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGACTTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp CCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTATGTGACAGGGCAGTTGGAGTaGGCACGGACAATTCGTGTT +
Preference number: 4 (lower is better)
Translates to: PEQMRSFQFHDGKEHRYVTGQLE*ARTIRV
Trigger: AACACGAATTGTCCGTGCTCACTCCAACTGCCCTGT...CACATACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486903.5
CDS-3UTR GCA 90 bp CACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTAAATGCCATGGCATTTaGACTCCCGGCCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: HRYVGIWTRLSSHVVQSSKCHGI*TPGLCC
Trigger: GCAGCAAAGGCCGGGAGTGCAAATGCCATGGCATTT...AGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp GGCTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTGAGGCTAAAATAAGCTaGTCTTGGGCAGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GLRVVVFVGCNAVVCGCCEAKIS*SWAEAG
Trigger: TCCAGCTTCTGCCCAAGAGCAGCTTATTTTAGCCTC...ACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR CCA 90 bp CATGGCTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGGCTTTTAGACTGCTaGAGAACCTTGATGCCCATC +
Preference number: 4 (lower is better)
Translates to: HGLRVVVFVGCNAVVCGCWLLDC*RTLMPI
Trigger: GATGGGCATCAAGGTTCTCCAGCAGTCTAAAAGCCA...GCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp CTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTGAATGTCCTTACATGAAGCCTAACTaGAACTGTGCGTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LDSFEQPCRTIFWPSECPYMKPN*NCASGH
Trigger: GTGGCCCGACGCACAGTTCCAGTTAGGCTTCATGTA...AGGACATTCACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATAGGTATGTGGGCATCTaGACTCGTTTGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHRYVGI*TRLSSH
Trigger: ATGGCTGCTCAAACGAGTCCAGATGCCCACATACCT...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp CAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAAGGTATGTGGGCATCTaGACTCGTTTGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: QRAQVCGHLDSFEQPCRTRYVGI*TRLSSH
Trigger: ATGGCTGCTCAAACGAGTCCAGATGCCCACATACCT...TGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp AAGTCCCAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTCCCAGTGTGGTCCAATaGTGTTGTCCAGTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KSQCGPMVLSSFSQFHLVPSVVQ*CCPVSA
Trigger: GGCTGAAACTGGACAACACCATTGGACCACACTGGG...AACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp GTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGTTAGTGGGGATACCTTaGAGTGAACTGATTCCCGTG +
Preference number: 4 (lower is better)
Translates to: VGIPWSELIPVSRFSCDPLVGIP*SELIPV
Trigger: CACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA...CGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp GGCTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTCCATGTCAGCTGCTTTaGCAAAAAGTAGGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: GLRVVVFVGCNAVVCGCCPCQLL*QKVGRL
Trigger: GAGCCTACCTACTTTTTGCCAAAGCAGCTGACATGG...ACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR TCA 90 bp GAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGCAGGCAGAAACTAGGTaGTTGGCCCAAGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ETVYLVGIPWSELIPVSRQAETR*LAQELL
Trigger: GAGGAGCTCTTGGGCCAATCACCTAGTTTCTGCCTG...CCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
CDS-3UTR TCA 90 bp GGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGCAGGCAGAAACTAGGTaGTTGGCCCAAGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GWETVYLVGIPWSELIPVQAETR*LAQELL
Trigger: GAGGAGCTCTTGGGCCAATCACCTAGTTTCTGCCTG...CACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
CDS-3UTR TCA 90 bp TTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGGACTCTTGATTTGGATGGGGTTTTGGGCTTTACATaGTCCTTCTTTAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: FPITALSGKLQRTLDLDGVLGFT*SFFSQG
Trigger: TCCTTGGCTAAAGAAGGATCATGTAAAGCCCAAAAC...CCCATCCAAATCAAGAGTCCGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCAGAAGACCAAGCCCATaGAGGCCGATTGCATTGCCC +
Preference number: 4 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSRRPSP*RPIALP
Trigger: GGGCAATGCAATCGGCCTTCATGGGCTTGGTCTTCT...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp GGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGAAGACCAAGCCCATaGAGGCCGATTGCATTGCCC +
Preference number: 4 (lower is better)
Translates to: GWETVYLVGIPWSELIPVRRPSP*RPIALP
Trigger: GGGCAATGCAATCGGCCTTCATGGGCTTGGTCTTCT...CACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp TTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCGCAAATGCATTGCCTTaGATGGCAGCTCGATTCCAT +
Preference number: 4 (lower is better)
Translates to: FHDGKEHRYVGIWTRLSSANALP*MAARFH
Trigger: ATGGAATCGAGCTGCCATTCAAGGCAATGCATTTGC...GCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp CAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAGCAAATGCATTGCCTTaGATGGCAGCTCGATTCCAT +
Preference number: 4 (lower is better)
Translates to: QRAQVCGHLDSFEQPCRTANALP*MAARFH
Trigger: ATGGAATCGAGCTGCCATTCAAGGCAATGCATTTGC...TGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp ATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTGGGCATCTGGACTCGTTTaGGCAGCCATGTCGTACAAT +
Preference number: 4 (lower is better)
Translates to: MRSFQFHDGKEHRYVGIWASGLV*AAMSYN
Trigger: ATTGTACGACATGGCTGCTCAAACGAGTCCAGATGC...CCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp TGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCGGGGATACCTTGGAGTaGACTGATTCCCGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: WETVYLVGIPWSELIPVSGDTLE*TDSREQ
Trigger: CTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCC...GCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp GTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTGAAATTGGGGATACCTTGGAGTaGACTGATTCCCGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VWSNGVVQFQPVPSRCEIGDTLE*TDSREQ
Trigger: CTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCC...AATTTCACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATCCAAGTGAATGTCCTTaGATGGCAGCTCGATTCCAT +
Preference number: 4 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHPSECP*MAARFH
Trigger: ATGGAATCGAGCTGCCATTCAAGGACATTCACTTGG...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378072.5
ENST00000475649.5
CDS-3UTR TCA 90 bp CAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACACCAAGTGAATGTCCTTaGATGGCAGCTCGATTCCAT +
Preference number: 4 (lower is better)
Translates to: QRAQVCGHLDSFEQPCRTPSECP*MAARFH
Trigger: ATGGAATCGAGCTGCCATTCAAGGACATTCACTTGG...TGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475649.5
CDS-3UTR GCA 90 bp TTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATAAATGCCATGGCATTTaGACTCCCGGCCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVGIPWSELIPVSRFSCDKCHGI*TPGLCC
Trigger: GCAGCAAAGGCCGGGAGTGCAAATGCCATGGCATTT...ATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp TTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGGACTCTTGATTTGGATGGGCATCTTTCCTATAAATaGCATGGCATTTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: FPITALSGKLQRTLDLDGHLSYK*HGICTP
Trigger: GGGAGTGCAAATGCCATGGCATTTATAGGAAAGATG...CCCATCCAAATCAAGAGTCCGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR GCA 90 bp TGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCCCCATGAAGGCCGATTaGATTGCCCTTACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: WETVYLVGIPWSELIPVSPMKAD*IALTGC
Trigger: GCAGCCAGTAAGGGCAATGCAATCGGCCTTCATGGG...GCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp TGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTCAGAAACTAGGTGATTaGCCCAAGAGCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CGHLDSFEQPCRTIFWPSQKLGD*PKSSSS
Trigger: AGAAGAGGAGCTCTTGGGCCAATCACCTAGTTTCTG...ACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR CCA 90 bp ACAGCCCTGAGCGGGAAACTGCAGCGGACTCTTGATTTGGATGGGAAACTGTTTTGGCTTTTAGACTGCTaGAGAACCTTGATGCCCATC +
Preference number: 4 (lower is better)
Translates to: TALSGKLQRTLDLDGKLFWLLDC*RTLMPI
Trigger: GATGGGCATCAAGGTTCTCCAGCAGTCTAAAAGCCA...AAACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTTTCCCGCTCAGGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CCA 90 bp GTGATCCGCATCCTACCCATGGTGATTTCTAAGCAACAAAATCAGCCCAGGAACTACATGAAGCCTAACTaGAACTGTGCGTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: VIRILPMVISKQQNQPRNYMKPN*NCASGH
Trigger: GTGGCCCGACGCACAGTTCCAGTTAGGCTTCATGTA...GTTCCTGGGCTGATTTTGTTGCTTAGAAATCACCATGGGTAGGATGCGGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp GGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGCTGTTGCATACATCTTaGCCAGATAATAAATGGCAA +
Preference number: 4 (lower is better)
Translates to: GPQVLSVSHHSPERETAALLHTS*PDNKWQ
Trigger: TTGCCATTTATTATCTGGCCAAGATGTATGCAACAG...CGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CCA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATTTAGTGGGGATACCTTaGAGTGAACTGATTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHLVGIP*SELIPV
Trigger: CACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp CAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACATTAGTGGGGATACCTTaGAGTGAACTGATTCCCGTG +
Preference number: 4 (lower is better)
Translates to: QRAQVCGHLDSFEQPCRTLVGIP*SELIPV
Trigger: CACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA...TGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp CAGTTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCAAAATAAGCTGCTCTTaGGCAGAAGCTGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QFHDGKEHRYVGIWTRLSKISCS*AEAGAE
Trigger: CTCTGCTCCAGCTTCTGCCCAAGAGCAGCTTATTTT...GCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR TCA 90 bp ACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTCAGGCAGAAACTAGGTaGTTGGCCCAAGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TVYLVGIPWSELIPVSRFQAETR*LAQELL
Trigger: GAGGAGCTCTTGGGCCAATCACCTAGTTTCTGCCTG...AAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
CDS-3UTR TCA 90 bp CTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTGAATGTCCTAGCCAGAGTAGTACATaGAGCCTAACTGGAACTGTG +
Preference number: 4 (lower is better)
Translates to: LDSFEQPCRTIFWPSECPSQSST*SLTGTV
Trigger: CACAGTTCCAGTTAGGCTTCATGTACTACTCTGGCT...AGGACATTCACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp TGTTTCTCTAGGATGGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCACATATAAGCCAGATTaGACATGGCTTGCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: CFSRMVPKSCLFPITALSTYKPD*TWLARC
Trigger: ACAACGCGCAAGCCATGTTCAATCTGGCTTATATGT...GCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACCATCCTAGAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp CAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAACATATAAGCCAGATTaGACATGGCTTGCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: QRAQVCGHLDSFEQPCRTTYKPD*TWLARC
Trigger: ACAACGCGCAAGCCATGTTCAATCTGGCTTATATGT...TGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp ACAGCCCTGAGCGGGAAACTGCAGCGGACTCTTGATTTGGATGGGAAACTGTTTAGTGAATGTCCTTTGTaGTGCCTAAGCCGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: TALSGKLQRTLDLDGKLFSECPL*CLSRVH
Trigger: ATGAACACGGCTTAGGCATCACAAAGGACATTCACT...AAACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTTTCCCGCTCAGGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp ACAGCCCTGAGCGGGAAACTGCAGCGGACTCTTGATTTGGATGGGAAACTGTTTAATCTTCTGGCCAAGTaGATGTCCTTTGTGATGCCT +
Preference number: 4 (lower is better)
Translates to: TALSGKLQRTLDLDGKLFNLLAK*MSFVMP
Trigger: AGGCATCACAAAGGACATTCACTTGGCCAGAAGATT...AAACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTTTCCCGCTCAGGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp ATATCCCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTGCATCTGGACTCGTTTaGGCAGCCATGTCGTACAAT +
Preference number: 4 (lower is better)
Translates to: ISRSKCVVSSFMTAKSTGASGLV*AAMSYN
Trigger: ATTGTACGACATGGCTGCTCAAACGAGTCCAGATGC...ACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGGGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp CCAGGAACAATGAGGCCAATCACAAATAAGTCCCAGTGTGGTCCAATGGTGTTGGCATCTGGACTCGTTTaGGCAGCCATGTCGTACAAT +
Preference number: 4 (lower is better)
Translates to: PGTMRPITNKSQCGPMVLASGLV*AAMSYN
Trigger: ATTGTACGACATGGCTGCTCAAACGAGTCCAGATGC...CAACACCATTGGACCACACTGGGACTTATTTGTGATTGGCCTCATTGTTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp GCATCCCGCAAAGGGTTTTCTCTACTAAGCAGGAAGTCTGAAGTTGTTTCTCTAGGGGATACCTTGGAGTaGACTGATTCCCGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: ASRKGFSLLSRKSEVVSLGDTLE*TDSREQ
Trigger: CTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCC...TAGAGAAACAACTTCAGACTTCCTGCTTAGTAGAGAAAACCCTTTGCGGGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp GTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGACTAAGCAGGAAGTCTaGAGTTGTTTCTCTAGGATG +
Preference number: 4 (lower is better)
Translates to: VGIPWSELIPVSRFSCDPTKQEV*SCFSRM
Trigger: CATCCTAGAGAAACAACTTCAGACTTCCTGCTTAGT...CGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR GCA 90 bp GGCTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTATTGCCCTTACTGGCTaGCATGGAAAAGTACTTGAA +
Preference number: 4 (lower is better)
Translates to: GLRVVVFVGCNAVVCGCCIALTG*HGKVLE
Trigger: TTCAAGTACTTTTCCATGGCAGCCAGTAAGGGCAAT...ACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp GTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGTTCATACCCCATTTCTaGAAGCAGTGCATACTGAAC +
Preference number: 4 (lower is better)
Translates to: VGIPWSELIPVSRFSCDPFIPHF*KQCILN
Trigger: GTTCAGTATGCACTGCTTGCAGAAATGGGGTATGAA...CGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284951.10
ENST00000423870.6
CDS-3UTR CCA 90 bp TTCCAGTTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGTGGCTTTTAGACTGCTaGAGAACCTTGATGCCCATC +
Preference number: 4 (lower is better)
Translates to: FQFHDGKEHRYVGIWTRLWLLDC*RTLMPI
Trigger: GATGGGCATCAAGGTTCTCCAGCAGTCTAAAAGCCA...CAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAACTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GTCCCAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTCCATGTCAGCTGCTTTaGCAAAAAGTAGGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: VPVWSNGVVQFQPVPSRCPCQLL*QKVGRL
Trigger: AAGCCTACCTACTTTTTGCCAAAGCAGCTGACATGG...ACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486903.5
CDS-3UTR CCA 90 bp TGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCTACATGAAGCCTAACTaGAACTGTGCGTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: WETVYLVGIPWSELIPVSYMKPN*NCASGH
Trigger: GTGGCCCGACGCACAGTTCCAGTTAGGCTTCATGTA...GCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp ACATGGCTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGATGCATTGCCTTGAATaGCAGCTCGATTCCATAGGA +
Preference number: 4 (lower is better)
Translates to: TWLARCGICWLQCCSVWLMHCLE*QLDSIG
Trigger: TCCTATGGAATCGAGCTGCCATTCAAGGCAATGCAT...CAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp TGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTGAATGTCCTTAGGTATGTGGGCATCTaGACTCGTTTGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: WTRLSSHVVQSSGQVNVLRYVGI*TRLSSH
Trigger: ATGGCTGCTCAAACGAGTCCAGATGCCCACATACCT...AAGGACATTCACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp GAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGCCCAGTGTGGTCCAATaGTGTTGTCCAGTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ETVYLVGIPWSELIPVSRPSVVQ*CCPVSA
Trigger: GGCTGAAACTGGACAACACCATTGGACCACACTGGG...CCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp GGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGCCCAGTGTGGTCCAATaGTGTTGTCCAGTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GWETVYLVGIPWSELIPVPSVVQ*CCPVSA
Trigger: GGCTGAAACTGGACAACACCATTGGACCACACTGGG...CACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp ATACATCTTTCCTATAAATGCCATGGCATTTGCACTCCCGGCCTTTGCTGCCTTCCCAGTGTGGTCCAATaGTGTTGTCCAGTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: IHLSYKCHGICTPGLCCLPSVVQ*CCPVSA
Trigger: GGCTGAAACTGGACAACACCATTGGACCACACTGGG...AAGGCAGCAAAGGCCGGGAGTGCAAATGCCATGGCATTTATAGGAAAGATGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR TCA 90 bp CAGTTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCGTTTTGGGCTTTACATaGTCCTTCTTTAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QFHDGKEHRYVGIWTRLSVLGFT*SFFSQG
Trigger: TCCTTGGCTAAAGAAGGATCATGTAAAGCCCAAAAC...GCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp TTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATAGCCAGAGTAGTACATaGAGCCTAACTGGAACTGTG +
Preference number: 4 (lower is better)
Translates to: LVGIPWSELIPVSRFSCDSQSST*SLTGTV
Trigger: CACAGTTCCAGTTAGGCTTCATGTACTACTCTGGCT...ATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp CTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTTAGTGAATGTCCTTTGTaGTGCCTAAGCCGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LARCGICWLQCCSVWLLFSECPL*CLSRVH
Trigger: ATGAACACGGCTTAGGCATCACAAAGGACATTCACT...AAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp TATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAAATCTTCTGGCCAAGTaGATGTCCTTTGTGATGCCT +
Preference number: 4 (lower is better)
Translates to: YVGIWTRLSSHVVQSSGQNLLAK*MSFVMP
Trigger: AGGCATCACAAAGGACATTCACTTGGCCAGAAGATT...TTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp TTCCAGTTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAATCTTCTGGCCAAGTaGATGTCCTTTGTGATGCCT +
Preference number: 4 (lower is better)
Translates to: FQFHDGKEHRYVGIWTRLNLLAK*MSFVMP
Trigger: AGGCATCACAAAGGACATTCACTTGGCCAGAAGATT...CAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAACTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp TTTGGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGGGGATACCTTGGAGTaGACTGATTCCCGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FGWETVYLVGIPWSELIPGDTLE*TDSREQ
Trigger: CTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCC...GGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp GTCCCAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTCCTTTTAGTAGTACATaGAGCCTAACTGGAACTGTG +
Preference number: 4 (lower is better)
Translates to: VPVWSNGVVQFQPVPSRCPFSST*SLTGTV
Trigger: CACAGTTCCAGTTAGGCTTCATGTACTACTAAAAGG...ACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475649.5
CDS-3UTR TCA 90 bp GTGATCCGCATCCTACCCATGGTGATTTCTAAGCAACAAAATCAGCCCAGGAACTGCTTTGATAGCTGGTaGAAATCCTCCTCAACAGGG +
Preference number: 4 (lower is better)
Translates to: VIRILPMVISKQQNQPRNCFDSW*KSSSTG
Trigger: CCCTGTTGAGGAGGATTTTCACCAGCTATCAAAGCA...GTTCCTGGGCTGATTTTGTTGCTTAGAAATCACCATGGGTAGGATGCGGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486903.5
CDS-3UTR GCA 90 bp TGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTATTGCCCTTACTGGCTaGCATGGAAAAGTACTTGAA +
Preference number: 4 (lower is better)
Translates to: CGHLDSFEQPCRTIFWPSIALTG*HGKVLE
Trigger: TTCAAGTACTTTTCCATGGCAGCCAGTAAGGGCAAT...ACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp GTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCTGAAAGTATTTAAGTaGTTCGGCATAATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VGIPWSELIPVSRFSCDPLKVFK*FGIIQG
Trigger: CCCCTGAATTATGCCGAAGCACTTAAATACTTTCAG...CGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR GCA 90 bp ATATCCCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTGCTCCACAGCAGTTCTaGATGATCTTACTACTCCTG +
Preference number: 4 (lower is better)
Translates to: ISRSKCVVSSFMTAKSTGAPQQF*MILLLL
Trigger: CAGGAGTAGTAAGATCATGCAGAACTGCTGTGGAGC...ACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR GCA 90 bp TGTTTCTCTAGGATGGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCATATCCCGGAGCAAATaGGTAGTTTCCAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: CFSRMVPKSCLFPITALSISRSK*VVSSFM
Trigger: CATGAAACTGGAAACTACGCATTTGCTCCGGGATAT...GCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACCATCCTAGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR GCA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATATATCCCGGAGCAAATaGGTAGTTTCCAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHISRSK*VVSSFM
Trigger: CATGAAACTGGAAACTACGCATTTGCTCCGGGATAT...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp ACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTACATGAAGCCTAACTaGAACTGTGCGTCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TVYLVGIPWSELIPVSRFYMKPN*NCASGH
Trigger: GTGGCCCGACGCACAGTTCCAGTTAGGCTTCATGTA...AAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp TTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATATGGCTTGCGCGTTGTaGTATTTGTTGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: LVGIPWSELIPVSRFSCDMACAL*YLLAAM
Trigger: CATTGCAGCCAACAAATACCACAACGCGCAAGCCAT...ATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp ATATCCCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTATGGCTTGCGCGTTGTaGTATTTGTTGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: ISRSKCVVSSFMTAKSTGMACAL*YLLAAM
Trigger: CATTGCAGCCAACAAATACCACAACGCGCAAGCCAT...ACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp TGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTATGTGGGCATCTaGACTCGTTTGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: WETVYLVGIPWSELIPVSRYVGI*TRLSSH
Trigger: ATGGCTGCTCAAACGAGTCCAGATGCCCACATACCT...GCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp TTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGGACTCTTGATTTGGATGGGAGCGGACTCTTGATTTaGATGGGAAACTGTTTATTT +
Preference number: 4 (lower is better)
Translates to: FPITALSGKLQRTLDLDGSGLLI*MGNCLF
Trigger: AAATAAACAGTTTCCCATCCAAATCAAGAGTCCGCT...CCCATCCAAATCAAGAGTCCGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATTTTTCCGCAGCTTTCTaGAAGTATTTAAGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHFSAAF*KYLSAS
Trigger: CGAAGCACTTAAATACTTTCAGAAAGCTGCGGAAAA...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp TATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTAGCCAGAGTAGTACATaGAGCCTAACTGGAACTGTG +
Preference number: 4 (lower is better)
Translates to: YLVGIPWSELIPVSRFSCSQSST*SLTGTV
Trigger: CACAGTTCCAGTTAGGCTTCATGTACTACTCTGGCT...ACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp TGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGCCAGAGTAGTACATaGAGCCTAACTGGAACTGTG +
Preference number: 4 (lower is better)
Translates to: WETVYLVGIPWSELIPVSSQSST*SLTGTV
Trigger: CACAGTTCCAGTTAGGCTTCATGTACTACTCTGGCT...GCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp GAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGCACAGCAGTTCTGCATaGTCTTACTACTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ETVYLVGIPWSELIPVSRHSSSA*SYYSCS
Trigger: GGAACAGGAGTAGTAAGATCATGCAGAACTGCTGTG...CCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp TGTTTCTCTAGGATGGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGCAAGCAGTGCATACTaGACAAGAGAAGAATCTATA +
Preference number: 4 (lower is better)
Translates to: CFSRMVPKSCLFPITALSASSAY*TREESI
Trigger: TATAGATTCTTCTCTTGTTCAGTATGCACTGCTTGC...GCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACCATCCTAGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp GGCTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTTCCAAAATGAATGCTaGATTGCTTTGAGCTACTTC +
Preference number: 4 (lower is better)
Translates to: GLRVVVFVGCNAVVCGCCFQNEC*IALSYF
Trigger: GAAGTAGCTCAAAGCAATTCAGCATTCATTTTGGAA...ACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR TCA 90 bp GGAAACTGCAGCGGACTCTTGATTTGGATGGGAAACTGTTTATTTAGTGGGGATGCATCTGGACTCGTTTaGGCAGCCATGTCGTACAAT +
Preference number: 4 (lower is better)
Translates to: GNCSGLLIWMGNCLFSGDASGLV*AAMSYN
Trigger: ATTGTACGACATGGCTGCTCAAACGAGTCCAGATGC...ATCCCCACTAAATAAACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp GAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGAATCTTCTGGCCAAGTaGATGTCCTTGAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: ETVYLVGIPWSELIPVSRNLLAK*MSLNGS
Trigger: GCTGCCATTCAAGGACATTCACTTGGCCAGAAGATT...CCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378072.5
ENST00000475649.5
CDS-3UTR TCA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCAATCTTCTGGCCAAGTaGATGTCCTTGAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSNLLAK*MSLNGS
Trigger: GCTGCCATTCAAGGACATTCACTTGGCCAGAAGATT...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378072.5
ENST00000475649.5
CDS-3UTR GCA 90 bp TTTGGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCAAATGCCATGGCATTTaGACTCCCGGCCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FGWETVYLVGIPWSELIPKCHGI*TPGLCC
Trigger: GCAGCAAAGGCCGGGAGTGCAAATGCCATGGCATTT...GGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp AAGTCCCAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTCATCTTTCCTATAAATaGCATGGCATTTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: KSQCGPMVLSSFSQFHLVHLSYK*HGICTP
Trigger: GGGAGTGCAAATGCCATGGCATTTATAGGAAAGATG...AACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp TGTTTCTCTAGGATGGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCCTGAAAGTATTTAAGTaGTTCGGCATAATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: CFSRMVPKSCLFPITALSLKVFK*FGIIQG
Trigger: CCCCTGAATTATGCCGAAGCACTTAAATACTTTCAG...GCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACCATCCTAGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR GCA 90 bp TTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCTGAAAGTATTTAAGTaGTTCGGCATAATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: FHDGKEHRYVGIWTRLSSLKVFK*FGIIQG
Trigger: CCCCTGAATTATGCCGAAGCACTTAAATACTTTCAG...GCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR GCA 90 bp TTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTTGTACTCCTGTTCCTGTTaGATACATCTTGGCCAGATA +
Preference number: 4 (lower is better)
Translates to: LRVVVFVGCNAVVCGCCLYSCSC*IHLGQI
Trigger: TATCTGGCCAAGATGTATGCAACAGGAACAGGAGTA...CAAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp TGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTTTTTACTCTAGCAAATaGATTGCCTTGAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: CGHLDSFEQPCRTIFWPSFYSSK*IALNGS
Trigger: GCTGCCATTCAAGGCAATGCATTTGCTAGAGTAAAA...ACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp TTCCAGTTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGGCTGTAGTGTGTGGCTaGTGTTTGATAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FQFHDGKEHRYVGIWTRLAVVCG*CLIVFL
Trigger: AAGAAAGACTATCAAACAGCAGCCACACACTACAGC...CAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAACTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp CACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTAGATTGAACATGGCTTaGGCGTTGTGGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: HRYVGIWTRLSSHVVQSSRLNMA*ALWYLL
Trigger: CAACAAATACCACAACGCGCAAGCCATGTTCAATCT...AGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGGCTTTTAGACTGCTaGAGAACCTTGATGCCCATC +
Preference number: 4 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSWLLDC*RTLMPI
Trigger: GATGGGCATCAAGGTTCTCCAGCAGTCTAAAAGCCA...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GGCTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTAATCCTAATGCGTTTTaGGCTTTACATGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: GLRVVVFVGCNAVVCGCCNPNAF*ALHDPS
Trigger: AGAAGGATCATGTAAAGCCCAAAACGCATTAGGATT...ACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp CATGGCTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCAATCCTAATGCGTTTTaGGCTTTACATGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: HGLRVVVFVGCNAVVCGCNPNAF*ALHDPS
Trigger: AGAAGGATCATGTAAAGCCCAAAACGCATTAGGATT...GCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGAATTTCTCAGCCCAGTaGCCTAGTTCACAGACACCT +
Preference number: 4 (lower is better)
Translates to: ETVYLVGIPWSELIPVSRNFSAQ*PSSQTP
Trigger: AGGTGTCTGTGAACTAGGCCACTGGGCTGAGAAATT...CCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284951.10
ENST00000423870.6
CDS-3UTR CCA 90 bp CGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTTGATACGTTGTGGTATTTGTTaGCTGCAATGCTGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: RVVVFVGCNAVVCGCCLIRCGIC*LQCCSV
Trigger: CACACTACAGCATTGCAGCCAACAAATACCACAACG...TATCAAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp TGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCATGGCTTGCGCGTTGTaGTATTTGTTGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: WETVYLVGIPWSELIPVSMACAL*YLLAAM
Trigger: CATTGCAGCCAACAAATACCACAACGCGCAAGCCAT...GCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp TTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTTGTGTCGTACAATCTTCTaGCCAAGTGAATGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LRVVVFVGCNAVVCGCCLCRTIF*PSECPL
Trigger: CAAAGGACATTCACTTGGCCAGAAGATTGTACGACA...CAAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp ACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTAGGTATGTGGGCATCTaGACTCGTTTGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: TVYLVGIPWSELIPVSRFRYVGI*TRLSSH
Trigger: ATGGCTGCTCAAACGAGTCCAGATGCCCACATACCT...AAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp GGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGTTAGTGGGGATACCTTaGAGTGAACTGATTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GWETVYLVGIPWSELIPVLVGIP*SELIPV
Trigger: CACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA...CACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp GAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTAGTGGGGATACCTTaGAGTGAACTGATTCCCGTG +
Preference number: 4 (lower is better)
Translates to: ETVYLVGIPWSELIPVSRLVGIP*SELIPV
Trigger: CACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA...CCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp TTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATGTGAATGTCCTTGAATaGCAGCTCGATTCCATAGGA +
Preference number: 4 (lower is better)
Translates to: LVGIPWSELIPVSRFSCDVNVLE*QLDSIG
Trigger: TCCTATGGAATCGAGCTGCCATTCAAGGACATTCAC...ATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378072.5
ENST00000475649.5
CDS-3UTR TCA 90 bp TTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATGTTTTGGGCTTTACATaGTCCTTCTTTAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LVGIPWSELIPVSRFSCDVLGFT*SFFSQG
Trigger: TCCTTGGCTAAAGAAGGATCATGTAAAGCCCAAAAC...ATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp CTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTGAATGTCCTTTTTCCGCAGCTTTCTaGAAGTATTTAAGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: LDSFEQPCRTIFWPSECPFSAAF*KYLSAS
Trigger: CGAAGCACTTAAATACTTTCAGAAAGCTGCGGAAAA...AGGACATTCACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp GTAGCGTTATTTTGCGGCACGGCAGCATTCCCCTCTAAATACATCTTTCCTATACACAGCAGTTCTGCATaGTCTTACTACTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VALFCGTAAFPSKYIFPIHSSSA*SYYSCS
Trigger: GGAACAGGAGTAGTAAGATCATGCAGAACTGCTGTG...TATAGGAAAGATGTATTTAGAGGGGAATGCTGCCGTGCCGCAAAATAACGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR TCA 90 bp CACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTAATGCTGAATTGCTTTaGGCTACTTCATACCCCATT +
Preference number: 4 (lower is better)
Translates to: HRYVGIWTRLSSHVVQSSNAELL*ATSYPI
Trigger: AATGGGGTATGAAGTAGCTCAAAGCAATTCAGCATT...AGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR TCA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCACATATAAGCCAGATTaGACATGGCTTGCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSTYKPD*TWLARC
Trigger: ACAACGCGCAAGCCATGTTCAATCTGGCTTATATGT...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp ACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTGAATGTCCTTTGTAGTGAATGTCCTTTGTaGTGCCTAAGCCGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: TRLSSHVVQSSGQVNVLCSECPL*CLSRVH
Trigger: ATGAACACGGCTTAGGCATCACAAAGGACATTCACT...ACAAAGGACATTCACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp TTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATGCATCCTACCCATGGTaGTTTCTAAGCAACAAAATC +
Preference number: 4 (lower is better)
Translates to: LVGIPWSELIPVSRFSCDASYPW*FLSNKI
Trigger: GATTTTGTTGCTTAGAAATCACCATGGGTAGGATGC...ATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR GCA 90 bp CACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTCTGAAAGTATTTAAGTaGTTCGGCATAATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: HRYVGIWTRLSSHVVQSSLKVFK*FGIIQG
Trigger: CCCCTGAATTATGCCGAAGCACTTAAATACTTTCAG...AGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR GCA 90 bp CAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTGAAATACTCCTGTTCCTGTTaGATACATCTTGGCCAGATA +
Preference number: 4 (lower is better)
Translates to: QCGPMVLSSFSQFHLVVKYSCSC*IHLGQI
Trigger: TATCTGGCCAAGATGTATGCAACAGGAACAGGAGTA...TTTCACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp CAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTGAAATTCATACCCCATTTCTaGAAGCAGTGCATACTGAAC +
Preference number: 4 (lower is better)
Translates to: QCGPMVLSSFSQFHLVVKFIPHF*KQCILN
Trigger: GTTCAGTATGCACTGCTTGCAGAAATGGGGTATGAA...TTTCACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR GCA 90 bp CTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTTTTTTACTCTAGCAAATaGATTGCCTTGAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: LARCGICWLQCCSVWLLFFYSSK*IALNGS
Trigger: GCTGCCATTCAAGGCAATGCATTTGCTAGAGTAAAA...AAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp TTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATGCTGTAGTGTGTGGCTaGTGTTTGATAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LVGIPWSELIPVSRFSCDAVVCG*CLIVFL
Trigger: AAGAAAGACTATCAAACAGCAGCCACACACTACAGC...ATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp CCAGGAACAATGAGGCCAATCACAAATAAGTCCCAGTGTGGTCCAATGGTGTTGGCTGTAGTGTGTGGCTaGTGTTTGATAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PGTMRPITNKSQCGPMVLAVVCG*CLIVFL
Trigger: AAGAAAGACTATCAAACAGCAGCCACACACTACAGC...CAACACCATTGGACCACACTGGGACTTATTTGTGATTGGCCTCATTGTTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp ATATCCCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTAGATTGAACATGGCTTaGGCGTTGTGGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: ISRSKCVVSSFMTAKSTGRLNMA*ALWYLL
Trigger: CAACAAATACCACAACGCGCAAGCCATGTTCAATCT...ACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGGGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp TTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATATATCCCGGAGCAAATaGGTAGTTTCCAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: LVGIPWSELIPVSRFSCDISRSK*VVSSFM
Trigger: CATGAAACTGGAAACTACGCATTTGCTCCGGGATAT...ATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR GCA 90 bp ATATCCCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTATATCCCGGAGCAAATaGGTAGTTTCCAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: ISRSKCVVSSFMTAKSTGISRSK*VVSSFM
Trigger: CATGAAACTGGAAACTACGCATTTGCTCCGGGATAT...ACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGGGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CCA 90 bp TATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTCCATGTCAGCTGCTTTaGCAAAAAGTAGGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: YLVGIPWSELIPVSRFSCPCQLL*QKVGRL
Trigger: AAGCCTACCTACTTTTTGCCAAAGCAGCTGACATGG...ACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000486903.5
CDS-3UTR CCA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCCCATGTCAGCTGCTTTaGCAAAAAGTAGGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSPCQLL*QKVGRL
Trigger: AAGCCTACCTACTTTTTGCCAAAGCAGCTGACATGG...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000486903.5
CDS-3UTR CCA 90 bp TTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATTACCCCAAAATCATCTaGGACATCATGTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LVGIPWSELIPVSRFSCDYPKII*DIMFPP
Trigger: TGGAGGAAACATGATGTCCCAGATGATTTTGGGGTA...ATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GTGATCCGCATCCTACCCATGGTGATTTCTAAGCAACAAAATCAGCCCAGGAACTACCCCAAAATCATCTaGGACATCATGTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VIRILPMVISKQQNQPRNYPKII*DIMFPP
Trigger: TGGAGGAAACATGATGTCCCAGATGATTTTGGGGTA...GTTCCTGGGCTGATTTTGTTGCTTAGAAATCACCATGGGTAGGATGCGGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTTGCATTGCCCTTACTaGCTGCCATGGAAAAGTACT +
Preference number: 4 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSLHCPY*LPWKST
Trigger: AGTACTTTTCCATGGCAGCCAGTAAGGGCAATGCAA...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATCTGTTGCATACATCTTaGCCAGATAATAAATGGCAA +
Preference number: 4 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHLLHTS*PDNKWQ
Trigger: TTGCCATTTATTATCTGGCCAAGATGTATGCAACAG...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp ACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTAATTTCTCAGCCCAGTaGCCTAGTTCACAGACACCT +
Preference number: 4 (lower is better)
Translates to: TVYLVGIPWSELIPVSRFNFSAQ*PSSQTP
Trigger: AGGTGTCTGTGAACTAGGCCACTGGGCTGAGAAATT...AAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284951.10
ENST00000423870.6
CDS-3UTR CCA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCATGCATTGCCTTGAATaGCAGCTCGATTCCATAGGA +
Preference number: 4 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSMHCLE*QLDSIG
Trigger: TCCTATGGAATCGAGCTGCCATTCAAGGCAATGCAT...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp AGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTATGTGGGCACAATGCTGTAGTGTGTaGCTGCTGTTTGATAGTCTT +
Preference number: 4 (lower is better)
Translates to: SKCVVSSFMTAKSTGMWAQCCSV*LLFDSL
Trigger: AAGACTATCAAACAGCAGCCACACACTACAGCATTG...TGCCCACATACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp CAAATAAGTCCCAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCCAATGCTGTAGTGTGTaGCTGCTGTTTGATAGTCTT +
Preference number: 4 (lower is better)
Translates to: QISPSVVQWCCPVSASSIQCCSV*LLFDSL
Trigger: AAGACTATCAAACAGCAGCCACACACTACAGCATTG...GATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGACTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCGTGAATGTCCTTGAATaGCAGCTCGATTCCATAGGA +
Preference number: 4 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSVNVLE*QLDSIG
Trigger: TCCTATGGAATCGAGCTGCCATTCAAGGACATTCAC...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378072.5
ENST00000475649.5
3UTR CAA 72 bp GCCGTGTTCATACATATAAGCCAGATTGAACATGGCTaGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTA +
Preference number: 4 (lower is better)
Translates to: AVFIHISQIEHG*RVVVFVGCNAV
Trigger: TACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCCATGTTCAATCTGGCTTATATGTATGAACACGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
3UTR CAA 72 bp CCAATCACAAATAAGTCCCAGTGTGGTCCAATGGTGTaGTCCAGTTTCAGCCAGTTCCATCTCGTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: PITNKSQCGPMV*SSFSQFHLVVK
Trigger: TTTCACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGACTTATTTGTGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCCTGATACCTGTGTGGTaGCATTTCTTTCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSLIPVW*HFFPFV
Trigger: GACAAAAGGAAAGAAATGTCACCACACAGGTATCAG...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp AGGATATCCCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACATTTTCCGCAGCTTTCTaGAAGTATTTAAGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: RISRSKCVVSSFMTAKSTFSAAF*KYLSAS
Trigger: CGAAGCACTTAAATACTTTCAGAAAGCTGCGGAAAA...TGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGGGATATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp TTTGGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCCACAGCAGTTCTGCATaGTCTTACTACTCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FGWETVYLVGIPWSELIPHSSSA*SYYSCS
Trigger: GGAACAGGAGTAGTAAGATCATGCAGAACTGCTGTG...GGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCGCATCCTACCCATGGTaGTTTCTAAGCAACAAAATC +
Preference number: 4 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSASYPW*FLSNKI
Trigger: GATTTTGTTGCTTAGAAATCACCATGGGTAGGATGC...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR TCA 90 bp GAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGGCATCCTACCCATGGTaGTTTCTAAGCAACAAAATC +
Preference number: 4 (lower is better)
Translates to: ETVYLVGIPWSELIPVSRASYPW*FLSNKI
Trigger: GATTTTGTTGCTTAGAAATCACCATGGGTAGGATGC...CCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR GCA 90 bp CAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAGGTGTAATATATCAGTaGCTTAGCTTGATCATATTC +
Preference number: 4 (lower is better)
Translates to: QRAQVCGHLDSFEQPCRTGVIYQ*LSLIIF
Trigger: GAATATGATCAAGCTAAGGCACTGATATATTACACC...TGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp GGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGCATCTTTCCTATAAATaGCATGGCATTTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: GWETVYLVGIPWSELIPVHLSYK*HGICTP
Trigger: GGGAGTGCAAATGCCATGGCATTTATAGGAAAGATG...CACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp GAGAAGAATCTATATCACCATCCTTATAGGCAAAGTAAGCTGTCAGGAATTTCTGCAGTAGCGTTATTTTaGGGCACGGCAGCATTCCCC +
Preference number: 4 (lower is better)
Translates to: EKNLYHHPYRQSKLSGISAVALF*GTAAFP
Trigger: GGGGAATGCTGCCGTGCCGCAAAATAACGCTACTGC...AGAAATTCCTGACAGCTTACTTTGCCTATAAGGATGGTGATATAGATTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR GCA 90 bp TGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCATTGCCCTTACTGGCTaGCATGGAAAAGTACTTGAA +
Preference number: 4 (lower is better)
Translates to: WETVYLVGIPWSELIPVSIALTG*HGKVLE
Trigger: TTCAAGTACTTTTCCATGGCAGCCAGTAAGGGCAAT...GCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp GGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGTACTCCTGTTCCTGTTaGATACATCTTGGCCAGATA +
Preference number: 4 (lower is better)
Translates to: GWETVYLVGIPWSELIPVYSCSC*IHLGQI
Trigger: TATCTGGCCAAGATGTATGCAACAGGAACAGGAGTA...CACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp TGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGATTGAACATGGCTTaGGCGTTGTGGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: WETVYLVGIPWSELIPVSRLNMA*ALWYLL
Trigger: CAACAAATACCACAACGCGCAAGCCATGTTCAATCT...GCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp CTTTTCCATGAAAGTAAAGAAGACCAAGCCCATGAAGGCCGATTGCATTGCCCTATATCCCGGAGCAAATaGGTAGTTTCCAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: LFHESKEDQAHEGRLHCPISRSK*VVSSFM
Trigger: CATGAAACTGGAAACTACGCATTTGCTCCGGGATAT...AGGGCAATGCAATCGGCCTTCATGGGCTTGGTCTTCTTTACTTTCATGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR CCA 90 bp TTTGGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCCAGAAACTAGGTGATTaGCCCAAGAGCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FGWETVYLVGIPWSELIPQKLGD*PKSSSS
Trigger: AGAAGAGGAGCTCTTGGGCCAATCACCTAGTTTCTG...GGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
CDS-3UTR CCA 90 bp GCATCCCGCAAAGGGTTTTCTCTACTAAGCAGGAAGTCTGAAGTTGTTTCTCTATTGCATTGCCCTTACTaGCTGCCATGGAAAAGTACT +
Preference number: 4 (lower is better)
Translates to: ASRKGFSLLSRKSEVVSLLHCPY*LPWKST
Trigger: AGTACTTTTCCATGGCAGCCAGTAAGGGCAATGCAA...TAGAGAAACAACTTCAGACTTCCTGCTTAGTAGAGAAAACCCTTTGCGGGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CCA 90 bp TTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTTGCTGTTGCATACATCTTaGCCAGATAATAAATGGCAA +
Preference number: 4 (lower is better)
Translates to: LRVVVFVGCNAVVCGCCLLLHTS*PDNKWQ
Trigger: TTGCCATTTATTATCTGGCCAAGATGTATGCAACAG...CAAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp TGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCCAATGCTGTAGTGTGTaGCTGCTGTTTGATAGTCTT +
Preference number: 4 (lower is better)
Translates to: WETVYLVGIPWSELIPVSQCCSV*LLFDSL
Trigger: AAGACTATCAAACAGCAGCCACACACTACAGCATTG...GCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GCATCCCGCAAAGGGTTTTCTCTACTAAGCAGGAAGTCTGAAGTTGTTTCTCTACGTTGTGGTATTTGTTaGCTGCAATGCTGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: ASRKGFSLLSRKSEVVSLRCGIC*LQCCSV
Trigger: CACACTACAGCATTGCAGCCAACAAATACCACAACG...TAGAGAAACAACTTCAGACTTCCTGCTTAGTAGAGAAAACCCTTTGCGGGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CCA 90 bp TATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTTGTCGTACAATCTTCTaGCCAAGTGAATGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: YLVGIPWSELIPVSRFSCCRTIF*PSECPL
Trigger: CAAAGGACATTCACTTGGCCAGAAGATTGTACGACA...ACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GCATCCCGCAAAGGGTTTTCTCTACTAAGCAGGAAGTCTGAAGTTGTTTCTCTAGTTGTTTCTCTAGGATaGTCCCCAAGTCTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: ASRKGFSLLSRKSEVVSLVVSLG*SPSLVC
Trigger: ACAGACAAGACTTGGGGACCATCCTAGAGAAACAAC...TAGAGAAACAACTTCAGACTTCCTGCTTAGTAGAGAAAACCCTTTGCGGGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
3UTR CAA 72 bp CAGCAGTTCTGCATGATCTTACTACTCCTGTTCCTGTaGCATACATCTTGGCCAGATAATAAATGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: QQFCMILLLLFL*HTSWPDNKWQG
Trigger: CCCTTGCCATTTATTATCTGGCCAAGATGTATGCAACAGGAACAGGAGTAGTAAGATCATGCAGAACTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR TCA 90 bp GGAAACTGCAGCGGACTCTTGATTTGGATGGGAAACTGTTTATTTAGTGGGGATCTGATACCTGTGTGGTaGCATTTCTTTCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: GNCSGLLIWMGNCLFSGDLIPVW*HFFPFV
Trigger: GACAAAAGGAAAGAAATGTCACCACACAGGTATCAG...ATCCCCACTAAATAAACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR TCA 90 bp CAAATAAGTCCCAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCATCAGTGCCTTAGCTTaGTCATATTCCATTCCTATT +
Preference number: 4 (lower is better)
Translates to: QISPSVVQWCCPVSASSIISALA*SYSIPI
Trigger: AATAGGAATGGAATATGATCAAGCTAAGGCACTGAT...GATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGACTTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp AAATACATCTTTCCTATAAATGCCATGGCATTTGCACTCCCGGCCTTTGCTGCCTTTTCCGCAGCTTTCTaGAAGTATTTAAGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: KYIFPINAMAFALPAFAAFSAAF*KYLSAS
Trigger: CGAAGCACTTAAATACTTTCAGAAAGCTGCGGAAAA...GGCAGCAAAGGCCGGGAGTGCAAATGCCATGGCATTTATAGGAAAGATGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR TCA 90 bp ATAAATGGCAAGGGGCTGCCCACTCTGAGATGCCAGGTAAAAATATTTGAAGGCGCAAGCAGTGCATACTaGACAAGAGAAGAATCTATA +
Preference number: 4 (lower is better)
Translates to: INGKGLPTLRCQVKIFEGASSAY*TREESI
Trigger: TATAGATTCTTCTCTTGTTCAGTATGCACTGCTTGC...GCCTTCAAATATTTTTACCTGGCATCTCAGAGTGGGCAGCCCCTTGCCATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR TCA 90 bp CATATAAGCCAGATTGAACATGGCTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCATCCTACCCATGGTaGTTTCTAAGCAACAAAATC +
Preference number: 4 (lower is better)
Translates to: HISQIEHGLRVVVFVGCNASYPW*FLSNKI
Trigger: GATTTTGTTGCTTAGAAATCACCATGGGTAGGATGC...ATTGCAGCCAACAAATACCACAACGCGCAAGCCATGTTCAATCTGGCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp GGAAACTGCAGCGGACTCTTGATTTGGATGGGAAACTGTTTATTTAGTGGGGATTACTCCTGTTCCTGTTaGATACATCTTGGCCAGATA +
Preference number: 4 (lower is better)
Translates to: GNCSGLLIWMGNCLFSGDYSCSC*IHLGQI
Trigger: TATCTGGCCAAGATGTATGCAACAGGAACAGGAGTA...ATCCCCACTAAATAAACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR GCA 90 bp TTTGGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCTCTCCACAGCAGTTCTaGATGATCTTACTACTCCTG +
Preference number: 4 (lower is better)
Translates to: FGWETVYLVGIPWSELIPSPQQF*MILLLL
Trigger: CAGGAGTAGTAAGATCATGCAGAACTGCTGTGGAGA...GGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378072.5
ENST00000486903.5
CDS-3UTR GCA 90 bp AATGCTGTAGTGTGTGGCTGCTGTTTGATAGTCTTTCTTAGTCCCATAGCCATATCTCCACAGCAGTTCTaGATGATCTTACTACTCCTG +
Preference number: 4 (lower is better)
Translates to: NAVVCGCCLIVFLSPIAISPQQF*MILLLL
Trigger: CAGGAGTAGTAAGATCATGCAGAACTGCTGTGGAGA...TATGGCTATGGGACTAAGAAAGACTATCAAACAGCAGCCACACACTACAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486903.5
CDS-3UTR CCA 90 bp ACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTACCCCAAAATCATCTaGGACATCATGTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TVYLVGIPWSELIPVSRFYPKII*DIMFPP
Trigger: TGGAGGAAACATGATGTCCCAGATGATTTTGGGGTA...AAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp TTTGGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCTTGCATTGCCCTTACTaGCTGCCATGGAAAAGTACT +
Preference number: 4 (lower is better)
Translates to: FGWETVYLVGIPWSELIPLHCPY*LPWKST
Trigger: AGTACTTTTCCATGGCAGCCAGTAAGGGCAATGCAA...GGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GTGATCCGCATCCTACCCATGGTGATTTCTAAGCAACAAAATCAGCCCAGGAACCTGTTGCATACATCTTaGCCAGATAATAAATGGCAA +
Preference number: 4 (lower is better)
Translates to: VIRILPMVISKQQNQPRNLLHTS*PDNKWQ
Trigger: TTGCCATTTATTATCTGGCCAAGATGTATGCAACAG...GTTCCTGGGCTGATTTTGTTGCTTAGAAATCACCATGGGTAGGATGCGGATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp TTTGGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCCGTTGTGGTATTTGTTaGCTGCAATGCTGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: FGWETVYLVGIPWSELIPRCGIC*LQCCSV
Trigger: CACACTACAGCATTGCAGCCAACAAATACCACAACG...GGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GCTGTAGTGTGTGGCTGCTGTTTGATAGTCTTTCTTAGTCCCATAGCCATAGTATGTCGTACAATCTTCTaGCCAAGTGAATGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: AVVCGCCLIVFLSPIAIVCRTIF*PSECPL
Trigger: CAAAGGACATTCACTTGGCCAGAAGATTGTACGACA...TACTATGGCTATGGGACTAAGAAAGACTATCAAACAGCAGCCACACACTACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
3UTR CAA 72 bp TTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTaGATAGTCTTTCTTAGTCCCATAGCCATAGTAATG +
Preference number: 4 (lower is better)
Translates to: FVGCNAVVCGCC*IVFLSPIAIVM
Trigger: CATTACTATGGCTATGGGACTAAGAAAGACTATCAAACAGCAGCCACACACTACAGCATTGCAGCCAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp TTTGGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTTTTGGGCTTTACATaGTCCTTCTTTAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: FGWETVYLVGIPWSELIPVLGFT*SFFSQG
Trigger: TCCTTGGCTAAAGAAGGATCATGTAAAGCCCAAAAC...GGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp TATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTATCAGTGCCTTAGCTTaGTCATATTCCATTCCTATT +
Preference number: 4 (lower is better)
Translates to: YLVGIPWSELIPVSRFSCISALA*SYSIPI
Trigger: AATAGGAATGGAATATGATCAAGCTAAGGCACTGAT...ACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp ACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTGAATGTCCTTTGTATCAGTGCCTTAGCTTaGTCATATTCCATTCCTATT +
Preference number: 4 (lower is better)
Translates to: TRLSSHVVQSSGQVNVLCISALA*SYSIPI
Trigger: AATAGGAATGGAATATGATCAAGCTAAGGCACTGAT...ACAAAGGACATTCACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp ACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTTTTCCGCAGCTTTCTaGAAGTATTTAAGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: TVYLVGIPWSELIPVSRFFSAAF*KYLSAS
Trigger: CGAAGCACTTAAATACTTTCAGAAAGCTGCGGAAAA...AAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR GCA 90 bp CAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTGAAAGGTGTAATATATCAGTaGCTTAGCTTGATCATATTC +
Preference number: 4 (lower is better)
Translates to: QCGPMVLSSFSQFHLVVKGVIYQ*LSLIIF
Trigger: GAATATGATCAAGCTAAGGCACTGATATATTACACC...TTTCACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp GGAAACTGCAGCGGACTCTTGATTTGGATGGGAAACTGTTTATTTAGTGGGGATTTTTACTCTAGCAAATaGATTGCCTTGAATGGCAGC +
Preference number: 4 (lower is better)
Translates to: GNCSGLLIWMGNCLFSGDFYSSK*IALNGS
Trigger: GCTGCCATTCAAGGCAATGCATTTGCTAGAGTAAAA...ATCCCCACTAAATAAACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CCA 90 bp TGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCCCCATCTTAAATAGCTaGTCTCCTTCATCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: WETVYLVGIPWSELIPVSPILNS*SPSSVK
Trigger: TTTTACAGATGAAGGAGACCAGCTATTTAAGATGGG...GCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGCCCATCTTAAATAGCTaGTCTCCTTCATCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: ETVYLVGIPWSELIPVSRPILNS*SPSSVK
Trigger: TTTTACAGATGAAGGAGACCAGCTATTTAAGATGGG...CCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp TGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAATCCTAATGCGTTTTaGGCTTTACATGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: WETVYLVGIPWSELIPVSNPNAF*ALHDPS
Trigger: AGAAGGATCATGTAAAGCCCAAAACGCATTAGGATT...GCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp GTGTTCATACATATAAGCCAGATTGAACATGGCTTGCGCGTTGTGGTATTTGTTATGCATTGCCTTGAATaGCAGCTCGATTCCATAGGA +
Preference number: 4 (lower is better)
Translates to: VFIHISQIEHGLRVVVFVMHCLE*QLDSIG
Trigger: TCCTATGGAATCGAGCTGCCATTCAAGGCAATGCAT...AACAAATACCACAACGCGCAAGCCATGTTCAATCTGGCTTATATGTATGAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp ACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTATCAGTGCCTTAGCTTaGTCATATTCCATTCCTATT +
Preference number: 4 (lower is better)
Translates to: TVYLVGIPWSELIPVSRFISALA*SYSIPI
Trigger: AATAGGAATGGAATATGATCAAGCTAAGGCACTGAT...AAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR TCA 90 bp GCATCCCGCAAAGGGTTTTCTCTACTAAGCAGGAAGTCTGAAGTTGTTTCTCTATTCCAAAATGAATGCTaGATTGCTTTGAGCTACTTC +
Preference number: 4 (lower is better)
Translates to: ASRKGFSLLSRKSEVVSLFQNEC*IALSYF
Trigger: GAAGTAGCTCAAAGCAATTCAGCATTCATTTTGGAA...TAGAGAAACAACTTCAGACTTCCTGCTTAGTAGAGAAAACCCTTTGCGGGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR GCA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCGGTGTAATATATCAGTaGCTTAGCTTGATCATATTC +
Preference number: 4 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSGVIYQ*LSLIIF
Trigger: GAATATGATCAAGCTAAGGCACTGATATATTACACC...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR GCA 90 bp GCATCCCGCAAAGGGTTTTCTCTACTAAGCAGGAAGTCTGAAGTTGTTTCTCTAGATCTAGACCTTTCCTaGCAATTAGATGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: ASRKGFSLLSRKSEVVSLDLDLS*QLDVIV
Trigger: GACAATTACATCTAATTGGCAGGAAAGGTCTAGATC...TAGAGAAACAACTTCAGACTTCCTGCTTAGTAGAGAAAACCCTTTGCGGGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CCA 90 bp ACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTAATCCTAATGCGTTTTaGGCTTTACATGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: TVYLVGIPWSELIPVSRFNPNAF*ALHDPS
Trigger: AGAAGGATCATGTAAAGCCCAAAACGCATTAGGATT...AAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CCA 90 bp AGAATCTATATCACCATCCTTATAGGCAAAGTAAGCTGTCAGGAATTTCTCAGCTTGCATTGCCCTTACTaGCTGCCATGGAAAAGTACT +
Preference number: 4 (lower is better)
Translates to: RIYITILIGKVSCQEFLSLHCPY*LPWKST
Trigger: AGTACTTTTCCATGGCAGCCAGTAAGGGCAATGCAA...GCTGAGAAATTCCTGACAGCTTACTTTGCCTATAAGGATGGTGATATAGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR GCA 90 bp GGAAACTGCAGCGGACTCTTGATTTGGATGGGAAACTGTTTATTTAGTGGGGATGGTGTAATATATCAGTaGCTTAGCTTGATCATATTC +
Preference number: 4 (lower is better)
Translates to: GNCSGLLIWMGNCLFSGDGVIYQ*LSLIIF
Trigger: GAATATGATCAAGCTAAGGCACTGATATATTACACC...ATCCCCACTAAATAAACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CCA 90 bp CCTAATGCGTTTTGGGCTTTACATGATCCTTCTTTAGCCAAGGACTCATATAATTACCCCAAAATCATCTaGGACATCATGTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PNAFWALHDPSLAKDSYNYPKII*DIMFPP
Trigger: TGGAGGAAACATGATGTCCCAGATGATTTTGGGGTA...ATTATATGAGTCCTTGGCTAAAGAAGGATCATGTAAAGCCCAAAACGCATTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS CCA 90 bp TCCCTGAGGCGGCTTTCCGCTAGCTCGCCTGTCACTTGGCGCACCTaGCTCTACAGGCCACGCCCTCAAGTCTTCCAAGAGGCCAGCGGT +
Preference number: 5 (lower is better)
Translates to: SLRRLSASSPVTWRT*LYRPRPQVFQEASG
Trigger: ACCGCTGGCCTCTTGGAAGACTTGAGGGCGTGGCCTGTAGAGCCAGGTGCGCCAAGTGACAGGCGAGCTAGCGGAAAGCCGCCTCAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486903.5
ENST00000646153.1
CDS TCA 90 bp GTGTTGACCCTCGGTCTCCTCCCACTTCTACATCCTCCAAGTCCCTaGGGCGGCTTTCCGCTAGCTCGCCTGTCACTTGGCGCACCTGGC +
Preference number: 5 (lower is better)
Translates to: VLTLGLLPLLHPPSP*GGFPLARLSLGAPG
Trigger: GCCAGGTGCGCCAAGTGACAGGCGAGCTAGCGGAAAGCCGCCTCAGGGACTTGGAGGATGTAGAAGTGGGAGGAGACCGAGGGTCAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486903.5
ENST00000646153.1
CDS CCA 90 bp TCCTCCAAGTCCCTGAGGCGGCTTTCCGCTAGCTCGCCTGTCACTTaGCGCACCTGGCTCTACAGGCCACGCCCTCAAGTCTTCCAAGAG +
Preference number: 5 (lower is better)
Translates to: SSKSLRRLSASSPVT*RTWLYRPRPQVFQE
Trigger: CTCTTGGAAGACTTGAGGGCGTGGCCTGTAGAGCCAGGTGCGCCAAGTGACAGGCGAGCTAGCGGAAAGCCGCCTCAGGGACTTGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486903.5
ENST00000646153.1
CDS-3UTR CAA 90 bp GGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGGCCCATGAAGGCCGATaGCATTGCCCTTACTGGCTG +
Preference number: 5 (lower is better)
Translates to: GPQVLSVSHHSPERETAAAHEGR*HCPYWL
Trigger: CAGCCAGTAAGGGCAATGCAATCGGCCTTCATGGGC...CGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS TCA 90 bp ATCCTCCTCAACAGGGCAGTTGGAGTGAGCACGGACAATTCGTGTTaGCCCTCGGTCTCCTCCCACTTCTACATCCTCCAAGTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: ILLNRAVGVSTDNSC*PSVSSHFYILQVPE
Trigger: CTCAGGGACTTGGAGGATGTAGAAGTGGGAGGAGACCGAGGGTCAACACGAATTGTCCGTGCTCACTCCAACTGCCCTGTTGAGGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486903.5
ENST00000646153.1
CDS-3UTR CAA 90 bp TGTTTCTCTAGGATGGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGCAGTAGCGTTATTTaGCGGCACGGCAGCATTCCC +
Preference number: 5 (lower is better)
Translates to: CFSRMVPKSCLFPITALSGSSVI*RHGSIP
Trigger: GGGAATGCTGCCGTGCCGCAAAATAACGCTACTGCC...GCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACCATCCTAGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CAA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATGGCAGTAGCGTTATTTaGCGGCACGGCAGCATTCCC +
Preference number: 5 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHGSSVI*RHGSIP
Trigger: GGGAATGCTGCCGTGCCGCAAAATAACGCTACTGCC...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp CAGTTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCGGCAGTAGCGTTATTTaGCGGCACGGCAGCATTCCC +
Preference number: 5 (lower is better)
Translates to: QFHDGKEHRYVGIWTRLSGSSVI*RHGSIP
Trigger: GGGAATGCTGCCGTGCCGCAAAATAACGCTACTGCC...GCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATGCCCATGAAGGCCGATaGCATTGCCCTTACTGGCTG +
Preference number: 5 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHAHEGR*HCPYWL
Trigger: CAGCCAGTAAGGGCAATGCAATCGGCCTTCATGGGC...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS GCA 90 bp TTCGGAGGCTTCTGCTGTACTCCTGCCCTGACACCACTGTTTCAGTaGATTATGGTAACCTCCCTAGACTGGGTTCATGCAGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: FGGFCCTPALTPLFQ*IMVTSLDWVHAAEL
Trigger: CAGCTCTGCTGCATGAACCCAGTCTAGGGAGGTTACCATAATGCACTGAAACAGTGGTGTCAGGGCAGGAGTACAGCAGAAGCCTCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476952.1
CDS CCA 90 bp TCCTCTGCTTTGATAGCTGGTGAAAATCCTCCTCAACAGGGCAGTTaGAGTGAGCACGGACAATTCGTGTTGACCCTCGGTCTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: SSALIAGENPPQQGS*SEHGQFVLTLGLLP
Trigger: TGGGAGGAGACCGAGGGTCAACACGAATTGTCCGTGCTCACTCCAACTGCCCTGTTGAGGAGGATTTTCACCAGCTATCAAAGCAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486903.5
ENST00000646153.1
CDS-3UTR CAA 90 bp CTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTTCACGGACAATTCGTGTaGACCCTCGGTCTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: LARCGICWLQCCSVWLLFHGQFV*TLGLLP
Trigger: TGGGAGGAGACCGAGGGTCAACACGAATTGTCCGTG...AAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486903.5
CDS-3UTR CAA 90 bp AGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTATGTGGGCAGGCAGTAGCGTTATTTaGCGGCACGGCAGCATTCCC +
Preference number: 5 (lower is better)
Translates to: SKCVVSSFMTAKSTGMWAGSSVI*RHGSIP
Trigger: GGGAATGCTGCCGTGCCGCAAAATAACGCTACTGCC...TGCCCACATACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp CAAATAAGTCCCAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCGCCCATGAAGGCCGATaGCATTGCCCTTACTGGCTG +
Preference number: 5 (lower is better)
Translates to: QISPSVVQWCCPVSASSIAHEGR*HCPYWL
Trigger: CAGCCAGTAAGGGCAATGCAATCGGCCTTCATGGGC...GATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGACTTATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp AGGATATCCCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGCCCATGAAGGCCGATaGCATTGCCCTTACTGGCTG +
Preference number: 5 (lower is better)
Translates to: RISRSKCVVSSFMTAKSTAHEGR*HCPYWL
Trigger: CAGCCAGTAAGGGCAATGCAATCGGCCTTCATGGGC...TGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGGGATATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATGGCATCTGGACTCGTTaGAGCAGCCATGTCGTACAA +
Preference number: 5 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHGIWTR*SSHVVQ
Trigger: TTGTACGACATGGCTGCTCAAACGAGTCCAGATGCC...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CAA 90 bp GGCTTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTGTGGTCCAATGGTGTaGTCCAGTTTCAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: GLRVVVFVGCNAVVCGCCCGPMV*SSFSQF
Trigger: GAACTGGCTGAAACTGGACAACACCATTGGACCACA...ACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGGAAACTGCAGCGCAGCGGACTCTTGATTaGGATGGGAAACTGTTTATT +
Preference number: 5 (lower is better)
Translates to: GPQVLSVSHHSPERETAAQRTLD*DGKLFI
Trigger: AATAAACAGTTTCCCATCCAAATCAAGAGTCCGCTG...CGCTGCAGTTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CAA 90 bp GTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGGACTGCTGGAGAACCTaGATGCCCATCTTAAATAGC +
Preference number: 5 (lower is better)
Translates to: VGIPWSELIPVSRFSCDPDCWRT*MPILNS
Trigger: GCTATTTAAGATGGGCATCAAGGTTCTCCAGCAGTC...CGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp TGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTTTGCACTCCCGGCCTTaGCTGCCTTTAAGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: CGHLDSFEQPCRTIFWPSLHSRP*LPLRSS
Trigger: ACTACTTCTTAAAGGCAGCAAAGGCCGGGAGTGCAA...ACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp TTGCGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTTGGGCATCTGGACTCGTTaGAGCAGCCATGTCGTACAA +
Preference number: 5 (lower is better)
Translates to: LRVVVFVGCNAVVCGCCLGIWTR*SSHVVQ
Trigger: TTGTACGACATGGCTGCTCAAACGAGTCCAGATGCC...CAAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATTGTGGTCCAATGGTGTaGTCCAGTTTCAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHCGPMV*SSFSQF
Trigger: GAACTGGCTGAAACTGGACAACACCATTGGACCACA...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CAA 90 bp TCTAGGATGGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCGGGAAAAACTGCAGCGGACTCTaGATTTGGATGGGAAACTGT +
Preference number: 5 (lower is better)
Translates to: SRMVPKSCLFPITALSGKNCSGL*IWMGNC
Trigger: ACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTT...TTTCCCGCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACCATCCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CAA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATCTACTCCTGTTCCTGTaGCATACATCTTGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHLLLFL*HTSWPD
Trigger: ATCTGGCCAAGATGTATGCAACAGGAACAGGAGTAG...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp TGTTTCTCTAGGATGGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCAGCAAATGCATTGCCTaGAATGGCAGCTCGATTCCA +
Preference number: 5 (lower is better)
Translates to: CFSRMVPKSCLFPITALSSKCIA*NGSSIP
Trigger: TGGAATCGAGCTGCCATTCAAGGCAATGCATTTGCT...GCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACCATCCTAGAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CAA 90 bp TTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTTGAGCAGCAGCAAATGCATTGCCTaGAATGGCAGCTCGATTCCA +
Preference number: 5 (lower is better)
Translates to: FHDGKEHRYVGIWTRLSSSKCIA*NGSSIP
Trigger: TGGAATCGAGCTGCCATTCAAGGCAATGCATTTGCT...GCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp TGTGGGCATCTGGACTCGTTTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTAGCAAATGCATTGCCTaGAATGGCAGCTCGATTCCA +
Preference number: 5 (lower is better)
Translates to: CGHLDSFEQPCRTIFWPSSKCIA*NGSSIP
Trigger: TGGAATCGAGCTGCCATTCAAGGCAATGCATTTGCT...ACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATGTGTGTGGCTGCTGTTaGATAGTCTTTCTTAGTCCC +
Preference number: 5 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHVCGCC*IVFLSP
Trigger: GGGACTAAGAAAGACTATCAAACAGCAGCCACACAC...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp CGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTTGATAGGCATCTGGACTCGTTaGAGCAGCCATGTCGTACAA +
Preference number: 5 (lower is better)
Translates to: RVVVFVGCNAVVCGCCLIGIWTR*SSHVVQ
Trigger: TTGTACGACATGGCTGCTCAAACGAGTCCAGATGCC...TATCAAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp CATGTCGTACAATCTTCTGGCCAAGTGAATGTCCTTGAATGGCAGCTCGATTCCGGCATCTGGACTCGTTaGAGCAGCCATGTCGTACAA +
Preference number: 5 (lower is better)
Translates to: HVVQSSGQVNVLEWQLDSGIWTR*SSHVVQ
Trigger: TTGTACGACATGGCTGCTCAAACGAGTCCAGATGCC...GGAATCGAGCTGCCATTCAAGGACATTCACTTGGCCAGAAGATTGTACGACATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475649.5
CDS-3UTR CAA 90 bp GCGGGAAACTGCAGCGGACTCTTGATTTGGATGGGAAACTGTTTATTTAGTGGGGATGGTCCCCAAGTCTaGTCTGTTTCCCATCACAGC +
Preference number: 5 (lower is better)
Translates to: AGNCSGLLIWMGNCLFSGDGPQV*SVSHHS
Trigger: GCTGTGATGGGAAACAGACAAGACTTGGGGACCATC...CCCACTAAATAAACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTTTCCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS CCA 90 bp GCCCTGACACCACTGTTTCAGTGCATTATGGTAACCTCCCTAGACTaGGTTCATGCAGCAGAGCTGGAATACTATTGCTCAACTCCTTTC +
Preference number: 5 (lower is better)
Translates to: ALTPLFQCIMVTSLD*VHAAELEYYCSTPF
Trigger: GAAAGGAGTTGAGCAATAGTATTCCAGCTCTGCTGCATGAACCCAGTCTAGGGAGGTTACCATAATGCACTGAAACAGTGGTGTCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476952.1
CDS-3UTR CAA 90 bp GCGGGAAACTGCAGCGGACTCTTGATTTGGATGGGAAACTGTTTATTTAGTGGGTTGCACTCCCGGCCTTaGCTGCCTTTAAGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: AGNCSGLLIWMGNCLFSGLHSRP*LPLRSS
Trigger: ACTACTTCTTAAAGGCAGCAAAGGCCGGGAGTGCAA...CCCACTAAATAAACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTTTCCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CAA 90 bp TTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATTTGCACTCCCGGCCTTaGCTGCCTTTAAGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: LVGIPWSELIPVSRFSCDLHSRP*LPLRSS
Trigger: ACTACTTCTTAAAGGCAGCAAAGGCCGGGAGTGCAA...ATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp CAAATAAGTCCCAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTTGCACTCCCGGCCTTaGCTGCCTTTAAGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: QISPSVVQWCCPVSASSILHSRP*LPLRSS
Trigger: ACTACTTCTTAAAGGCAGCAAAGGCCGGGAGTGCAA...GATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGACTTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp CCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTATGTGGTGTGTGGCTGCTGTTaGATAGTCTTTCTTAGTCCC +
Preference number: 5 (lower is better)
Translates to: PEQMRSFQFHDGKEHRYVVCGCC*IVFLSP
Trigger: GGGACTAAGAAAGACTATCAAACAGCAGCCACACAC...CACATACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp TTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTGAATGTCCTTTGTGATGCCAACATGGCTTGCGCGTaGTGGTATTTGTTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: LSSHVVQSSGQVNVLCDANMACA*WYLLAA
Trigger: TGCAGCCAACAAATACCACAACGCGCAAGCCATGTT...GGCATCACAAAGGACATTCACTTGGCCAGAAGATTGTACGACATGGCTGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp TGTTTCTCTAGGATGGTCCCCAAGTCTTGTCTGTTTCCCATCACAGCCCTGAGCCAGATTGAACATGGCTaGCGCGTTGTGGTATTTGTT +
Preference number: 5 (lower is better)
Translates to: CFSRMVPKSCLFPITALSQIEHG*RVVVFV
Trigger: AACAAATACCACAACGCGCAAGCCATGTTCAATCTG...GCTCAGGGCTGTGATGGGAAACAGACAAGACTTGGGGACCATCCTAGAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS GCA 90 bp CACAAGAGACTCCCTGATGGGCCTTGTCACTTTGTCCCTAAGAGTTaGTCACTGGAGACTTTCAGAGATTCAGGACCTGTTCAAGACAAA +
Preference number: 5 (lower is better)
Translates to: HKRLPDGPCHFVPKS*SLETFRDSGPVQDK
Trigger: TTTGTCTTGAACAGGTCCTGAATCTCTGAAAGTCTCCAGTGAGCAACTCTTAGGGACAAAGTGACAAGGCCCATCAGGGAGTCTCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492548.1
CDS-3UTR CAA 90 bp TTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATGACTGCTGGAGAACCTaGATGCCCATCTTAAATAGC +
Preference number: 5 (lower is better)
Translates to: LVGIPWSELIPVSRFSCDDCWRT*MPILNS
Trigger: GCTATTTAAGATGGGCATCAAGGTTCTCCAGCAGTC...ATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp TTGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTGAATGTCCTTTGTGATGCCGACTGCTGGAGAACCTaGATGCCCATCTTAAATAGC +
Preference number: 5 (lower is better)
Translates to: LSSHVVQSSGQVNVLCDADCWRT*MPILNS
Trigger: GCTATTTAAGATGGGCATCAAGGTTCTCCAGCAGTC...GGCATCACAAAGGACATTCACTTGGCCAGAAGATTGTACGACATGGCTGCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp AGGATATCCCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGACTGCTGGAGAACCTaGATGCCCATCTTAAATAGC +
Preference number: 5 (lower is better)
Translates to: RISRSKCVVSSFMTAKSTDCWRT*MPILNS
Trigger: GCTATTTAAGATGGGCATCAAGGTTCTCCAGCAGTC...TGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGGGATATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATTTGTCCAAGAGAGACTaGTATCTGAACATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHLSKRD*YLNISS
Trigger: AGAGGAGATGTTCAGATACAAGTCTCTCTTGGACAA...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATCCTACCCATGGTGATTTGTCCAAGAGAGACTaGTATCTGAACATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ELIPVSRFSCDPHPTHGDLSKRD*YLNISS
Trigger: AGAGGAGATGTTCAGATACAAGTCTCTCTTGGACAA...ATCACCATGGGTAGGATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp ATATCCCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTGTGTGTGGCTGCTGTTaGATAGTCTTTCTTAGTCCC +
Preference number: 5 (lower is better)
Translates to: ISRSKCVVSSFMTAKSTGVCGCC*IVFLSP
Trigger: GGGACTAAGAAAGACTATCAAACAGCAGCCACACAC...ACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGAACATGGCTTGCGCGTaGTGGTATTTGTTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: ETVYLVGIPWSELIPVSRNMACA*WYLLAA
Trigger: TGCAGCCAACAAATACCACAACGCGCAAGCCATGTT...CCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp CCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAGGTATGTGCAGATTGAACATGGCTaGCGCGTTGTGGTATTTGTT +
Preference number: 5 (lower is better)
Translates to: PEQMRSFQFHDGKEHRYVQIEHG*RVVVFV
Trigger: AACAAATACCACAACGCGCAAGCCATGTTCAATCTG...CACATACCTGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GGAAACTGCAGCGGACTCTTGATTTGGATGGGAAACTGTTTATTTAGTGGGGATGGCATCTGGACTCGTTaGAGCAGCCATGTCGTACAA +
Preference number: 5 (lower is better)
Translates to: GNCSGLLIWMGNCLFSGDGIWTR*SSHVVQ
Trigger: TTGTACGACATGGCTGCTCAAACGAGTCCAGATGCC...ATCCCCACTAAATAAACAGTTTCCCATCCAAATCAAGAGTCCGCTGCAGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CAA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGGTCCAATGGTGTaGTCCAGTTTCAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSCGPMV*SSFSQF
Trigger: GAACTGGCTGAAACTGGACAACACCATTGGACCACA...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS GCA 90 bp ACCACTGTTTCAGTGCATTATGGTAACCTCCCTAGACTGGGTTCATaGAGCAGAGCTGGAATACTATTGCTCAACTCCTTTCACATGCTG +
Preference number: 5 (lower is better)
Translates to: TTVSVHYGNLPRLGS*SRAGILLLNSFHML
Trigger: CAGCATGTGAAAGGAGTTGAGCAATAGTATTCCAGCTCTGCTGCATGAACCCAGTCTAGGGAGGTTACCATAATGCACTGAAACAGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476952.1
CDS CCA 90 bp GACTCCCTGATGGGCCTTGTCACTTTGTCCCTAAGAGTTGCTCACTaGAGACTTTCAGAGATTCAGGACCTGTTCAAGACAAACTTACAT +
Preference number: 5 (lower is better)
Translates to: DSLMGLVTLSLRVAH*RLSEIQDLFKTNLH
Trigger: ATGTAAGTTTGTCTTGAACAGGTCCTGAATCTCTGAAAGTCTCCAGTGAGCAACTCTTAGGGACAAAGTGACAAGGCCCATCAGGGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492548.1
CDS-3UTR CAA 90 bp TGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCCTACTCCTGTTCCTGTaGCATACATCTTGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: WETVYLVGIPWSELIPVSLLLFL*HTSWPD
Trigger: ATCTGGCCAAGATGTATGCAACAGGAACAGGAGTAG...GCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GTCCCAGTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTATAGGAGAAGCGCCATaGGATACATCTTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: VPVWSNGVVQFQPVPSRCIGEAP*DTSSLF
Trigger: AAAAAGAGAAGATGTATCCAATGGCGCTTCTCCTAT...ACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CAA 90 bp GGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATCCGCATTATCAGTGCCTTAGCTaGATCATATTCCATTCCTAT +
Preference number: 5 (lower is better)
Translates to: GIPWSELIPVSRFSCDPHYQCLS*IIFHSY
Trigger: ATAGGAATGGAATATGATCAAGCTAAGGCACTGATA...ATGCGGATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GCATCCCGCAAAGGGTTTTCTCTACTAAGCAGGAAGTCTGAAGTTGTTTCTCTACTACTCCTGTTCCTGTaGCATACATCTTGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: ASRKGFSLLSRKSEVVSLLLLFL*HTSWPD
Trigger: ATCTGGCCAAGATGTATGCAACAGGAACAGGAGTAG...TAGAGAAACAACTTCAGACTTCCTGCTTAGTAGAGAAAACCCTTTGCGGGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284951.10
CDS-3UTR CAA 90 bp TTTGGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCAACATGGCTTGCGCGTaGTGGTATTTGTTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: FGWETVYLVGIPWSELIPNMACA*WYLLAA
Trigger: TGCAGCCAACAAATACCACAACGCGCAAGCCATGTT...GGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp TATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTCAGATTGAACATGGCTaGCGCGTTGTGGTATTTGTT +
Preference number: 5 (lower is better)
Translates to: YLVGIPWSELIPVSRFSCQIEHG*RVVVFV
Trigger: AACAAATACCACAACGCGCAAGCCATGTTCAATCTG...ACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284951.10
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp AATGCTGTAGTGTGTGGCTGCTGTTTGATAGTCTTTCTTAGTCCCATAGCCATATGTGGTCCAATGGTGTaGTCCAGTTTCAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: NAVVCGCCLIVFLSPIAICGPMV*SSFSQF
Trigger: GAACTGGCTGAAACTGGACAACACCATTGGACCACA...TATGGCTATGGGACTAAGAAAGACTATCAAACAGCAGCCACACACTACAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGTTGTCCAAGAGAGACTaGTATCTGAACATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GWETVYLVGIPWSELIPVLSKRD*YLNISS
Trigger: AGAGGAGATGTTCAGATACAAGTCTCTCTTGGACAA...CACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp ATAAATGGCAAGGGGCTGCCCACTCTGAGATGCCAGGTAAAAATATTTGAAGGCTTGTCCAAGAGAGACTaGTATCTGAACATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: INGKGLPTLRCQVKIFEGLSKRD*YLNISS
Trigger: AGAGGAGATGTTCAGATACAAGTCTCTCTTGGACAA...GCCTTCAAATATTTTTACCTGGCATCTCAGAGTGGGCAGCCCCTTGCCATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423870.6
CDS-3UTR CAA 90 bp TTTGGATGGGAAACTGTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCCTACTCCTGTTCCTGTaGCATACATCTTGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: FGWETVYLVGIPWSELIPLLLFL*HTSWPD
Trigger: ATCTGGCCAAGATGTATGCAACAGGAACAGGAGTAG...GGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAACAGTTTCCCATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp TTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTGATATAGGAGAAGCGCCATaGGATACATCTTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: LVGIPWSELIPVSRFSCDIGEAP*DTSSLF
Trigger: AAAAAGAGAAGATGTATCCAATGGCGCTTCTCCTAT...ATCACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CAA 90 bp AGGATATCCCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACAATAGGAGAAGCGCCATaGGATACATCTTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: RISRSKCVVSSFMTAKSTIGEAP*DTSSLF
Trigger: AAAAAGAGAAGATGTATCCAATGGCGCTTCTCCTAT...TGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGGGATATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CAA 90 bp CGCGTTGTGGTATTTGTTGGCTGCAATGCTGTAGTGTGTGGCTGCTGTTTGATACAATTCTGTAGAACATaGATTCCCGACAAATATCTG +
Preference number: 5 (lower is better)
Translates to: RVVVFVGCNAVVCGCCLIQFCRT*IPDKYL
Trigger: CAGATATTTGTCGGGAATCAATGTTCTACAGAATTG...TATCAAACAGCAGCCACACACTACAGCATTGCAGCCAACAAATACCACAACGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp AGGATATCCCGGAGCAAATGCGTAGTTTCCAGTTTCATGACGGCAAAGAGCACACAATTCTGTAGAACATaGATTCCCGACAAATATCTG +
Preference number: 5 (lower is better)
Translates to: RISRSKCVVSSFMTAKSTQFCRT*IPDKYL
Trigger: CAGATATTTGTCGGGAATCAATGTTCTACAGAATTG...TGTGCTCTTTGCCGTCATGAAACTGGAAACTACGCATTTGCTCCGGGATATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCATAGGAGAAGCGCCATaGGATACATCTTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSIGEAP*DTSSLF
Trigger: AAAAAGAGAAGATGTATCCAATGGCGCTTCTCCTAT...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CAA 90 bp GTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTGAAATTATAGGAGAAGCGCCATaGGATACATCTTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: VWSNGVVQFQPVPSRCEIIGEAP*DTSSLF
Trigger: AAAAAGAGAAGATGTATCCAATGGCGCTTCTCCTAT...AATTTCACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423870.6
ENST00000475649.5
ENST00000486903.5
CDS-3UTR CAA 90 bp GTGTGGTCCAATGGTGTTGTCCAGTTTCAGCCAGTTCCATCTCGTTGTGAAATTTTATGTTCCTCTGCTTaGATAGCTGGTGAAAATCCT +
Preference number: 5 (lower is better)
Translates to: VWSNGVVQFQPVPSRCEILCSSA*IAGENP
Trigger: AGGATTTTCACCAGCTATCAAAGCAGAGGAACATAA...AATTTCACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486903.5
CDS-3UTR CAA 90 bp TATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCTGTCAATTCTGTAGAACATaGATTCCCGACAAATATCTG +
Preference number: 5 (lower is better)
Translates to: YLVGIPWSELIPVSRFSCQFCRT*IPDKYL
Trigger: CAGATATTTGTCGGGAATCAATGTTCTACAGAATTG...ACAGGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS-3UTR CAA 90 bp GTTTATTTAGTGGGGATACCTTGGAGTGAACTGATTCCCGTGAGCAGGTTTTCCCAATTCTGTAGAACATaGATTCCCGACAAATATCTG +
Preference number: 5 (lower is better)
Translates to: VYLVGIPWSELIPVSRFSQFCRT*IPDKYL
Trigger: CAGATATTTGTCGGGAATCAATGTTCTACAGAATTG...GGAAAACCTGCTCACGGGAATCAGTTCACTCCAAGGTATCCCCACTAAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284951.10
ENST00000378072.5
ENST00000423870.6
ENST00000486903.5
CDS TCA 90 bp TCAATAGAACATGCAGAATTACTCTGCATGGCAAGTGTAAGACTCTaGATTTTACTTCTCAAAGGAAAGCCAGTCCACAAGAGACTCCCT +
Preference number: 5 (lower is better)
Translates to: SIEHAELLCMASVRL*ILLLKGKPVHKRLP
Trigger: AGGGAGTCTCTTGTGGACTGGCTTTCCTTTGAGAAGTAAAATTCAGAGTCTTACACTTGCCATGCAGAGTAATTCTGCATGTTCTATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492548.1
CDS CCA 72 bp TCCCTGAGGCGGCTTTCCGCTAGCTCGCCTGTCACTTaGCGCACCTGGCTCTACAGGCCACGCCCTCAAGTC +
Preference number: 6 (lower is better)
Translates to: SLRRLSASSPVT*RTWLYRPRPQV
Trigger: GACTTGAGGGCGTGGCCTGTAGAGCCAGGTGCGCCAAGTGACAGGCGAGCTAGCGGAAAGCCGCCTCAGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486903.5
ENST00000646153.1
CDS CCA 72 bp CGGCTTTCCGCTAGCTCGCCTGTCACTTGGCGCACCTaGCTCTACAGGCCACGCCCTCAAGTCTTCCAAGAG +
Preference number: 6 (lower is better)
Translates to: RLSASSPVTWRT*LYRPRPQVFQE
Trigger: CTCTTGGAAGACTTGAGGGCGTGGCCTGTAGAGCCAGGTGCGCCAAGTGACAGGCGAGCTAGCGGAAAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486903.5
ENST00000646153.1
CDS TCA 72 bp CTCGGTCTCCTCCCACTTCTACATCCTCCAAGTCCCTaGGGCGGCTTTCCGCTAGCTCGCCTGTCACTTGGC +
Preference number: 6 (lower is better)
Translates to: LGLLPLLHPPSP*GGFPLARLSLG
Trigger: GCCAAGTGACAGGCGAGCTAGCGGAAAGCCGCCTCAGGGACTTGGAGGATGTAGAAGTGGGAGGAGACCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486903.5
ENST00000646153.1
CDS CAA 72 bp CAACAGGGCAGTTGGAGTGAGCACGGACAATTCGTGTaGACCCTCGGTCTCCTCCCACTTCTACATCCTCCA +
Preference number: 6 (lower is better)
Translates to: QQGSWSEHGQFV*TLGLLPLLHPP
Trigger: TGGAGGATGTAGAAGTGGGAGGAGACCGAGGGTCAACACGAATTGTCCGTGCTCACTCCAACTGCCCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486903.5
ENST00000646153.1
CDS TCA 72 bp AACAGGGCAGTTGGAGTGAGCACGGACAATTCGTGTTaGCCCTCGGTCTCCTCCCACTTCTACATCCTCCAA +
Preference number: 6 (lower is better)
Translates to: NRAVGVSTDNSC*PSVSSHFYILQ
Trigger: TTGGAGGATGTAGAAGTGGGAGGAGACCGAGGGTCAACACGAATTGTCCGTGCTCACTCCAACTGCCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486903.5
ENST00000646153.1
CDS CCA 72 bp TTGATAGCTGGTGAAAATCCTCCTCAACAGGGCAGTTaGAGTGAGCACGGACAATTCGTGTTGACCCTCGGT +
Preference number: 6 (lower is better)
Translates to: LIAGENPPQQGS*SEHGQFVLTLG
Trigger: ACCGAGGGTCAACACGAATTGTCCGTGCTCACTCCAACTGCCCTGTTGAGGAGGATTTTCACCAGCTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486903.5
ENST00000646153.1
CDS CAA 72 bp CAGTCCACAAGAGACTCCCTGATGGGCCTTGTCACTTaGTCCCTAAGAGTTGCTCACTGGAGACTTTCAGAG +
Preference number: 6 (lower is better)
Translates to: QSTRDSLMGLVT*SLRVAHWRLSE
Trigger: CTCTGAAAGTCTCCAGTGAGCAACTCTTAGGGACAAAGTGACAAGGCCCATCAGGGAGTCTCTTGTGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492548.1
CDS CAA 90 bp AAGGAAAGCCAGTCCACAAGAGACTCCCTGATGGGCCTTGTCACTTaGTCCCTAAGAGTTGCTCACTGGAGACTTTCAGAGATTCAGGAC +
Preference number: 6 (lower is better)
Translates to: KESQSTRDSLMGLVT*SLRVAHWRLSEIQD
Trigger: GTCCTGAATCTCTGAAAGTCTCCAGTGAGCAACTCTTAGGGACAAAGTGACAAGGCCCATCAGGGAGTCTCTTGTGGACTGGCTTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492548.1
CDS CAA 90 bp TTTCATGACGGCAAAGAGCACAGGTATGTGGGCATCTGGACTCGTTaGAGCAGCCATGTCGTACAATCTTCTGGCCAAGTGAATGTCCAT +
Preference number: 6 (lower is better)
Translates to: FHDGKEHRYVGIWTR*SSHVVQSSGQVNVH
Trigger: ATGGACATTCACTTGGCCAGAAGATTGTACGACATGGCTGCTCAAACGAGTCCAGATGCCCACATACCTGTGCTCTTTGCCGTCATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482196.5
CDS CCA 72 bp CCACTGTTTCAGTGCATTATGGTAACCTCCCTAGACTaGGTTCATGCAGCAGAGCTGGAATACTATTGCTCA +
Preference number: 6 (lower is better)
Translates to: PLFQCIMVTSLD*VHAAELEYYCS
Trigger: TGAGCAATAGTATTCCAGCTCTGCTGCATGAACCCAGTCTAGGGAGGTTACCATAATGCACTGAAACAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476952.1
CDS CCA 72 bp ATGGGCCTTGTCACTTTGTCCCTAAGAGTTGCTCACTaGAGACTTTCAGAGATTCAGGACCTGTTCAAGACA +
Preference number: 6 (lower is better)
Translates to: MGLVTLSLRVAH*RLSEIQDLFKT
Trigger: TGTCTTGAACAGGTCCTGAATCTCTGAAAGTCTCCAGTGAGCAACTCTTAGGGACAAAGTGACAAGGCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492548.1
CDS CAA 72 bp CCAATCACAAATAAGTCCCAGTGTGGTCCAATGGTGTaGTCCAGTTTCAGCCAGTTCCATCTCGTTGTGAAC +
Preference number: 6 (lower is better)
Translates to: PITNKSQCGPMV*SSFSQFHLVVN
Trigger: GTTCACAACGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGACTTATTTGTGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646153.1
CDS CAA 90 bp GGTAACCTCCCTAGACTGGGTTCATGCAGCAGAGCTGGAATACTATaGCTCAACTCCTTTCACATGCTGTCTATAGTTATTTCAGGATGG +
Preference number: 6 (lower is better)
Translates to: GNLPRLGSCSRAGIL*LNSFHMLSIVISGW
Trigger: CCATCCTGAAATAACTATAGACAGCATGTGAAAGGAGTTGAGCAATAGTATTCCAGCTCTGCTGCATGAACCCAGTCTAGGGAGGTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476952.1
CDS GCA 72 bp TCAGTGCATTATGGTAACCTCCCTAGACTGGGTTCATaGAGCAGAGCTGGAATACTATTGCTCAACTCCTTT +
Preference number: 6 (lower is better)
Translates to: SVHYGNLPRLGS*SRAGILLLNSF
Trigger: AAAGGAGTTGAGCAATAGTATTCCAGCTCTGCTGCATGAACCCAGTCTAGGGAGGTTACCATAATGCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476952.1
CDS CAA 90 bp CCTCTCCCTAGTTCTGTAGGGCAATGTCTTTCCATCCTTGAAGACTaGGCATCAGCTGACACCAGGCTTAATGATTCTTATTTCTCTTCA +
Preference number: 6 (lower is better)
Translates to: PLPSSVGQCLSILED*ASADTRLNDSYFSS
Trigger: TGAAGAGAAATAAGAATCATTAAGCCTGGTGTCAGCTGATGCCAAGTCTTCAAGGATGGAAAGACATTGCCCTACAGAACTAGGGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477435.1
CDS CAA 72 bp CCTAGACTGGGTTCATGCAGCAGAGCTGGAATACTATaGCTCAACTCCTTTCACATGCTGTCTATAGTTATT +
Preference number: 6 (lower is better)
Translates to: PRLGSCSRAGIL*LNSFHMLSIVI
Trigger: AATAACTATAGACAGCATGTGAAAGGAGTTGAGCAATAGTATTCCAGCTCTGCTGCATGAACCCAGTCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476952.1
CDS GCA 72 bp TTTTCAAGAATGTTAGCCTTTTCTCCACAGCAGTTCTaGATGATCTTACTACTCCTGTTCCTGTTGCATACA +
Preference number: 6 (lower is better)
Translates to: FSRMLAFSPQQF*MILLLLFLLHT
Trigger: TGTATGCAACAGGAACAGGAGTAGTAAGATCATGCAGAACTGCTGTGGAGAAAAGGCTAACATTCTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378072.5
ENST00000486903.5
ENST00000646153.1