RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SECISBP2L (Homo sapiens)

Ensembl gene IDs: ENSG00000138593

Ensembl transcript IDs: ENST00000261847.7, ENST00000380927.6, ENST00000557923.1, ENST00000557940.1, ENST00000559122.1, ENST00000559198.1, ENST00000559424.1, ENST00000559471.6, ENST00000561203.1, ENST00000561428.1

Found 500 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGAGTTCAGTAAAGAATCTGCCCAATTCTTCTCTCCTGCCTCTGTaGGGCAAAGCCCTGCCCCAGATAATCAGGGCAGGGATAATACCC +
Preference number: 1 (lower is better)
Translates to: MSSVKNLPNSSLLPL*GKALPQIIRAGIIP
Trigger: GGGTATTATCCCTGCCCTGATTATCTGGGGCAGGGCTTTGCCTCACAGAGGCAGGAGAGAAGAATTGGGCAGATTCTTTACTGAACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR CCA 90 bp TTCTTGGGTTGTCCTCTAGAGGTGACCTGTCTCATAAAAAGGCTATaGTCCCTTGGATTTGCTGGCAGAAGAGGTACTGCATATGCGAGA +
Preference number: 1 (lower is better)
Translates to: FLGCPLEVTCLIKRL*SLGFAGRRGTAYAR
Trigger: TCTCGCATATGCAGTACCTCTTCTGCCAGCAAATCCAAGGGACCATAGCCTTTTTATGAGACAGGTCACCTCTAGAGGACAACCCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR GCA 90 bp TCTAGAGGTGACCTGTCTCATAAAAAGGCTATGGTCCCTTGGATTTaGTGGCAGAAGAGGTACTGCATATGCGAGAGCATTTACCGAACA +
Preference number: 1 (lower is better)
Translates to: SRGDLSHKKAMVPWI*WQKRYCICESIYRT
Trigger: TGTTCGGTAAATGCTCTCGCATATGCAGTACCTCTTCTGCCAGCAAATCCAAGGGACCATAGCCTTTTTATGAGACAGGTCACCTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR CCA 90 bp TTGTCCTCTAGAGGTGACCTGTCTCATAAAAAGGCTATGGTCCCTTaGATTTGCTGGCAGAAGAGGTACTGCATATGCGAGAGCATTTAC +
Preference number: 1 (lower is better)
Translates to: LSSRGDLSHKKAMVP*ICWQKRYCICESIY
Trigger: GTAAATGCTCTCGCATATGCAGTACCTCTTCTGCCAGCAAATCCAAGGGACCATAGCCTTTTTATGAGACAGGTCACCTCTAGAGGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR CCA 90 bp AGAGGTGACCTGTCTCATAAAAAGGCTATGGTCCCTTGGATTTGCTaGCAGAAGAGGTACTGCATATGCGAGAGCATTTACCGAACATAT +
Preference number: 1 (lower is better)
Translates to: RGDLSHKKAMVPWIC*QKRYCICESIYRTY
Trigger: ATATGTTCGGTAAATGCTCTCGCATATGCAGTACCTCTTCTGCCAGCAAATCCAAGGGACCATAGCCTTTTTATGAGACAGGTCACCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR GCA 90 bp CTTCCTCCTCTAAGCCTTGATTATCAGGATACATGTCACAAGTTGTaGAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATT +
Preference number: 1 (lower is better)
Translates to: LPPLSLDYQDTCHKL*KVPFLDLLTVTMVI
Trigger: AATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATCCTGATAATCAAGGCTTAGAGGAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR TCA 90 bp CCTGTGAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTaGCATCGAGCAAAGGAAATTTACACCATAAAAAGTATGAACAGT +
Preference number: 1 (lower is better)
Translates to: PVKSHHLKVKSYLNH*HRAKEIYTIKSMNS
Trigger: ACTGTTCATACTTTTTATGGTGTAAATTTCCTTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTCACAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR GCA 90 bp ATGTATAAATCCATGAGTACTATTTCAGAGGCTTCATTCCTTACCTaGTGTGTTCCTTTAAATATTGGATATTTAGTGCCTAGGAAGTCT +
Preference number: 1 (lower is better)
Translates to: MYKSMSTISEASFLT*CVPLNIGYLVPRKS
Trigger: AGACTTCCTAGGCACTAAATATCCAATATTTAAAGGAACACAGCAGGTAAGGAATGAAGCCTCTGAAATAGTACTCATGGATTTATACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR GCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCATGGTCCCTTGGATTTaGTGGCAGAAGAGGTACTGC +
Preference number: 2 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPMVPWI*WQKRYC
Trigger: GCAGTACCTCTTCTGCCAGCAAATCCAAGGGACCAT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCAAGGCTATGGTCCCTTaGATTTGCTGGCAGAAGAGG +
Preference number: 2 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPKAMVP*ICWQKR
Trigger: CCTCTTCTGCCAGCAAATCCAAGGGACCATAGCCTT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR GCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCATAAAAGGTAATGGCTaGAACCCTTCCACAGCTGGA +
Preference number: 2 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPIKGNG*NPSTAG
Trigger: TCCAGCTGTGGAAGGGTTGCAGCCATTACCTTTTAT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCCCATGTATAAATCCATaGGTACTATTTCAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPPCINP*VLFQRL
Trigger: AAGCCTCTGAAATAGTACTCATGGATTTATACATGG...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCAATATAAGAAACCTGTaGAAAGCCATCATCTCAAGG +
Preference number: 2 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPNIRNL*KAIISR
Trigger: CCTTGAGATGATGGCTTTTCACAGGTTTCTTATATT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCAGCAAACAAACCTACTaGAGCAGAAATCTAACTTTG +
Preference number: 2 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPSKQTY*SRNLTL
Trigger: CAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACCAATTCTTCTCTCCTaGCTCTGTGAGGCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: EKPSSQGQELSESLTSSKPILLS*LCEAKP
Trigger: GGGCTTTGCCTCACAGAGGCAGGAGAGAAGAATTGG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTTCAAATCAAGAGTCCTaGACCAGAAGCATGCAAGAG +
Preference number: 2 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTSNQES*TRSMQE
Trigger: CTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGA...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR GCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTTTGCTATGTGGAAGGTaGTCAAGGCTAGGTGCAAAA +
Preference number: 2 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTLLCGR*SRLGAK
Trigger: TTTTGCACCTAGCCTTGAGCACCTTCCACATAGCAA...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR CAA 90 bp AAACTTCCTCCTCTAAGCCTTGATTATCAGGATACATGTCACAAGTaGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTC +
Preference number: 2 (lower is better)
Translates to: KLPPLSLDYQDTCHK*CKVPFLDLLTVTMV
Trigger: GACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATCCTGATAATCAAGGCTTAGAGGAGGAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR GCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACATAAAAGGTAATGGCTaGAACCCTTCCACAGCTGGA +
Preference number: 2 (lower is better)
Translates to: KSISQIKSPEPEACKRTHIKGNG*NPSTAG
Trigger: TCCAGCTGTGGAAGGGTTGCAGCCATTACCTTTTAT...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCCAATTCTTCTCTCCTaGCTCTGTGAGGCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHPILLS*LCEAKP
Trigger: GGGCTTTGCCTCACAGAGGCAGGAGAGAAGAATTGG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAAGGTCCTATCATGGGTaGCTGTTCACTATTATAGAC +
Preference number: 2 (lower is better)
Translates to: EKPSSQGQELSESLTSSKRSYHG*LFTIID
Trigger: GTCTATAATAGTGAACAGTCACCCATGATAGGACCT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR GCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGGAGTTTACATGTAAGTaGAGCAGTCATACAATCGGT +
Preference number: 2 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKEFTCK*SSHTIG
Trigger: ACCGATTGTATGACTGCTGCACTTACATGTAAACTC...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR GCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGAAGGTGAAACAGTTTTaGACTCAGGACAAGTTTGGA +
Preference number: 2 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKKVKQF*TQDKFG
Trigger: TCCAAACTTGTCCTGAGTGCAAAACTGTTTCACCTT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATAAGGCTATGGTCCCTTaGATTTGCTGGCAGAAGAGG +
Preference number: 2 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHKAMVP*ICWQKR
Trigger: CCTCTTCTGCCAGCAAATCCAAGGGACCATAGCCTT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR CAA 90 bp AAGCATGCTCTCAAAATGGTAACATTTCCTTTAATAATTCTTGGGTaGTCCTCTAGAGGTGACCTGTCTCATAAAAAGGCTATGGTCCCT +
Preference number: 2 (lower is better)
Translates to: KHALKMVTFPLIILG*SSRGDLSHKKAMVP
Trigger: AGGGACCATAGCCTTTTTATGAGACAGGTCACCTCTAGAGGACAACCCAAGAATTATTAAAGGAAATGTTACCATTTTGAGAGCATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTTGCAAAATGTTGAGATaGAGCATAAAAGGTAATGGC +
Preference number: 2 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTCKMLR*SIKGNG
Trigger: GCCATTACCTTTTATGCTTCATCTCAACATTTTGCA...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGAAGCTGAAACAGATCTaGATTTTCCACACAGTTCTT +
Preference number: 2 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKKLKQI*IFHTVL
Trigger: AAGAACTGTGTGGAAAATTCAGATCTGTTTCAGCTT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTTTCATTTAATTTTCTaGCTCCACCCCCAGTTCTTT +
Preference number: 2 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKFHLIF*LHPQFF
Trigger: AAAGAACTGGGGGTGGAGTCAGAAAATTAAATGAAA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAAGGTCCTATCATGGGTaGCTGTTCACTATTATAGAC +
Preference number: 2 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAARSYHG*LFTIID
Trigger: GTCTATAATAGTGAACAGTCACCCATGATAGGACCT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAAGTAACTATGGTCATTaGTATGTGGAAGGTGCTCAA +
Preference number: 2 (lower is better)
Translates to: EKPSSQGQELSESLTSSKSNYGH*YVEGAQ
Trigger: TTGAGCACCTTCCACATAGCAATGACCATAGTTACT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACTGCAAAATGTTGAGATaGAGCATAAAAGGTAATGGC +
Preference number: 2 (lower is better)
Translates to: KSISQIKSPEPEACKRTHCKMLR*SIKGNG
Trigger: GCCATTACCTTTTATGCTTCATCTCAACATTTTGCA...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAAAGCTGAAACAGATCTaGATTTTCCACACAGTTCTT +
Preference number: 2 (lower is better)
Translates to: EKPSSQGQELSESLTSSKKLKQI*IFHTVL
Trigger: AAGAACTGTGTGGAAAATTCAGATCTGTTTCAGCTT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR CCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACACTCAGGACAAGTTTaGATACTCAATCAAATCCAT +
Preference number: 2 (lower is better)
Translates to: EKPSSQGQELSESLTSSKHSGQV*ILNQIH
Trigger: ATGGATTTGATTGAGTATCCAAACTTGTCCTGAGTG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAATAATCAGTGACTTCTaGCTAAACATTTGTGGACCA +
Preference number: 2 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAIISDF*LNICGP
Trigger: TGGTCCACAAATGTTTAGTCAGAAGTCACTGATTAT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCAAAGTTCCTTTCCTTaGCCTCCTGACAGTAACTAT +
Preference number: 2 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHQSSFP*PPDSNY
Trigger: ATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATAGGTCAAGAGTTATCTaGATCACTGACATCGAGCAA +
Preference number: 2 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHRSRVI*ITDIEQ
Trigger: TTGCTCGATGTCAGTGATTCAGATAACTCTTGACCT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTCCTTCTCAGTTTTGTaGCTGCTTATGGAAGCTTGT +
Preference number: 2 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHSFSVL*LLMEAC
Trigger: ACAAGCTTCCATAAGCAGGCACAAAACTGAGAAGGA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATAGTCCAGGTGGTGACTaGCTAGCAAATAAAACATTT +
Preference number: 2 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHSPGGD*LANKTF
Trigger: AAATGTTTTATTTGCTAGTCAGTCACCACCTGGACT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATACATGTCACAAGTTGTaGAAAGTTCCTTTCCTTGAC +
Preference number: 2 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHTCHKL*KVPFLD
Trigger: GTCAAGGAAAGGAACTTTGCACAACTTGTGACATGT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCCATGTATAAATCCATaGGTACTATTTCAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHPCINP*VLFQRL
Trigger: AAGCCTCTGAAATAGTACTCATGGATTTATACATGG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR TCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATAATATAAGAAACCTGTaGAAAGCCATCATCTCAAGG +
Preference number: 2 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHNIRNL*KAIISR
Trigger: CCTTGAGATGATGGCTTTTCACAGGTTTCTTATATT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTTTTGTGCCTGCTTATaGAAGCTTGTAAGTGGAAAA +
Preference number: 2 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHFCACL*KLVSGK
Trigger: TTTTCCACTTACAAGCTTCCATAAGCAGGCACAAAA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR CCA 72 bp AGAGGTGACCTGTCTCATAAAAAGGCTATGGTCCCTTaGATTTGCTGGCAGAAGAGGTACTGCATATGCGAG +
Preference number: 3 (lower is better)
Translates to: RGDLSHKKAMVP*ICWQKRYCICE
Trigger: CTCGCATATGCAGTACCTCTTCTGCCAGCAAATCCAAGGGACCATAGCCTTTTTATGAGACAGGTCACCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR CCA 72 bp TGTCCTCTAGAGGTGACCTGTCTCATAAAAAGGCTATaGTCCCTTGGATTTGCTGGCAGAAGAGGTACTGCA +
Preference number: 3 (lower is better)
Translates to: CPLEVTCLIKRL*SLGFAGRRGTA
Trigger: TGCAGTACCTCTTCTGCCAGCAAATCCAAGGGACCATAGCCTTTTTATGAGACAGGTCACCTCTAGAGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR CAA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCGATACATGTCACAAGTaGTGCAAAGTTCCTTTCCTT +
Preference number: 3 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPDTCHK*CKVPFL
Trigger: AAGGAAAGGAACTTTGCACAACTTGTGACATGTATC...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR GCA 72 bp GACCTGTCTCATAAAAAGGCTATGGTCCCTTGGATTTaGTGGCAGAAGAGGTACTGCATATGCGAGAGCATT +
Preference number: 3 (lower is better)
Translates to: DLSHKKAMVPWI*WQKRYCICESI
Trigger: AATGCTCTCGCATATGCAGTACCTCTTCTGCCAGCAAATCCAAGGGACCATAGCCTTTTTATGAGACAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR CCA 72 bp CTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTaGAAGGTGCTCAAGGCTAGGTGCAAAATAGGTATT +
Preference number: 3 (lower is better)
Translates to: LDLLTVTMVIAM*KVLKARCKIGI
Trigger: AATACCTATTTTGCACCTAGCCTTGAGCACCTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR CAA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACCTTCCTTCTCAGTTTaGTGCCTGCTTATGGAAGCT +
Preference number: 3 (lower is better)
Translates to: EKPSSQGQELSESLTSSKPSFSV*CLLMEA
Trigger: AGCTTCCATAAGCAGGCACAAAACTGAGAAGGAAGG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR TCA 72 bp GGATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTaGCCTCCTGACAGTAACTATGGTCATTGCTATGTG +
Preference number: 3 (lower is better)
Translates to: GYMSQVVQSSFP*PPDSNYGHCYV
Trigger: CACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR CAA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGGCACTCAGGACAAGTTaGGATACTCAATCAAATCCA +
Preference number: 3 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKALRTS*DTQSNP
Trigger: TGGATTTGATTGAGTATCCAAACTTGTCCTGAGTGC...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR CCA 72 bp GAAGCAAATATGAGACAGAACCTGGAGGTCCTATCATaGGTGACTGTTCACTATTATAGACAGCATCTATCA +
Preference number: 3 (lower is better)
Translates to: EANMRQNLEVLS*VTVHYYRQHLS
Trigger: TGATAGATGCTGTCTATAATAGTGAACAGTCACCCATGATAGGACCTCCAGGTTCTGTCTCATATTTGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR CAA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAGATACATGTCACAAGTaGTGCAAAGTTCCTTTCCTT +
Preference number: 3 (lower is better)
Translates to: EKPSSQGQELSESLTSSKDTCHK*CKVPFL
Trigger: AAGGAAAGGAACTTTGCACAACTTGTGACATGTATC...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR TCA 72 bp CGTATATTAAATACTGGACAGTGCAAAATGTTGAGATaGAGCATAAAAGGTAATGGCTGCAACCCTTCCACA +
Preference number: 3 (lower is better)
Translates to: RILNTGQCKMLR*SIKGNGCNPST
Trigger: TGTGGAAGGGTTGCAGCCATTACCTTTTATGCTTCATCTCAACATTTTGCACTGTCCAGTATTTAATATACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR TCA 72 bp AGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTaGCATCGAGCAAAGGAAATTTACACCATAAAAAGT +
Preference number: 3 (lower is better)
Translates to: SHHLKVKSYLNH*HRAKEIYTIKS
Trigger: ACTTTTTATGGTGTAAATTTCCTTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR-3UTR CAA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCATTTAGCTCATTTATaGTCTCCTAAGCAGGTATAC +
Preference number: 3 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHHLAHL*SPKQVY
Trigger: GTATACCTGCTTAGGAGACAATAAATGAGCTAAATG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR CCA 72 bp TTAAAAGGTGAAACAGTTTTGCACTCAGGACAAGTTTaGATACTCAATCAAATCCATATCTCAAATCAAGAG +
Preference number: 3 (lower is better)
Translates to: LKGETVLHSGQV*ILNQIHISNQE
Trigger: CTCTTGATTTGAGATATGGATTTGATTGAGTATCCAAACTTGTCCTGAGTGCAAAACTGTTTCACCTTTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCTCGGTCCATGGTGCCTaGAGCCGCAACGGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSSVHGA*SRNGPA
Trigger: CGCGGGCCCGTTGCGGCTGCAGGCACCATGGACCGA...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCCGCTCGGGTCCAGACTaGGTTCCGGACCTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSRSGPD*VPDLRP
Trigger: GGGGCGGAGGTCCGGAACCCAGTCTGGACCCGAGCG...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCCCTCAGCTGACAGCTTaGCATTCTGCTCCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPPQLTA*HSAPWG
Trigger: CCCCCACGGAGCAGAATGTCAAGCTGTCAGCTGAGG...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCCCAGGACTGGCCTGCTaGTCAGCAGTCCATGCCTCA +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPPGLAC*SAVHAS
Trigger: TGAGGCATGGACTGCTGACCAGCAGGCCAGTCCTGG...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCCCCAGCACTTGTAGCTaGGGTAGTACTGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPPSTCS*GSTACS
Trigger: GCTACAGGCAGTACTACCTCAGCTACAAGTGCTGGG...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
53% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCCAGAGTGCTCTTTGTTaGGCGAGCTGCAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPQSALC*ASCSCW
Trigger: CCAGCAACTGCAGCTCGCTCAACAAAGAGCACTCTG...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAATCGGTCCATGGTGCCTaGAGCCGCAACGGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKSVHGA*SRNGPA
Trigger: CGCGGGCCCGTTGCGGCTGCAGGCACCATGGACCGA...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACGGGCTCGGTCCATGGTaGCTGCAGCCGCAACGGGCC +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHGLGPW*LQPQRA
Trigger: GGCCCGTTGCGGCTGCAGGCACCATGGACCGAGCCC...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCTGCCCAGGACTGGCCTaGTGGTCAGCAGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSCPGLA*WSAVHA
Trigger: GGCATGGACTGCTGACCAGCAGGCCAGTCCTGGGCA...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTGGGGGCTCGGTCCATaGTGCCTGCAGCCGCAACGG +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKWGLGP*CLQPQR
Trigger: CCGTTGCGGCTGCAGGCACCATGGACCGAGCCCCCA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAGGGCTCGGTCCATGGTaGCTGCAGCCGCAACGGGCC +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAGLGPW*LQPQRA
Trigger: GGCCCGTTGCGGCTGCAGGCACCATGGACCGAGCCC...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAATGGGGGCTCGGTCCATaGTGCCTGCAGCCGCAACGG +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKWGLGP*CLQPQR
Trigger: CCGTTGCGGCTGCAGGCACCATGGACCGAGCCCCCA...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCTCGATGGCTGGACAATaGGAAGACCTGTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPSMAGQ*EDLSKL
Trigger: CAGCTTGGACAGGTCTTCCCATTGTCCAGCCATCGA...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCCCAGGACTGGCCTGCTaGTCAGCAGTCCATGCCTCA +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSPGLAC*SAVHAS
Trigger: TGAGGCATGGACTGCTGACCAGCAGGCCAGTCCTGG...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACCCGCCCCTATCTGGCTaGCCGCGACACCGATTCGGC +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHPPLSG*PRHRFG
Trigger: GCCGAATCGGTGTCGCGGCCAGCCAGATAGGGGCGG...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559471.6
CDS-3UTR GCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCATGCTCTTCTTCTCCTaGCCTTGGACTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPMLFFS*PWTSRA
Trigger: TGCTCTGGAAGTCCAAGGGCAGGAGAAGAAGAGCAT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCGCTTCACTAGCCCCCTaGTCACTAGAAGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPASLAP*SLEDSA
Trigger: TGCTGAATCTTCTAGTGAGCAGGGGGCTAGTGAAGC...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCCAGGTAGCTGGGAATTaGAGTTGGTTCCACACCAGA +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPQVAGN*SWFHTR
Trigger: TCTGGTGTGGAACCAACTCCAATTCCCAGCTACCTG...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCCTGTCCAAGCTGACTTaGACGCTCAGTGCATTCTGT +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPLSKLT*TLSAFC
Trigger: ACAGAATGCACTGAGCGTCCAAGTCAGCTTGGACAG...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCTTCTGCTTCGATGGCTaGACAATGGGAAGACCTGTC +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPFCFDG*TMGRPV
Trigger: GACAGGTCTTCCCATTGTCCAGCCATCGAAGCAGAA...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTCTGCTGCCCAGGACTaGCCTGCTGGTCAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKSAAQD*PAGQQS
Trigger: GGACTGCTGACCAGCAGGCCAGTCCTGGGCAGCAGA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCTGCACGTTTGGGAACTaGGGTGGTAATAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPCTFGN*GGNRNW
Trigger: CCAATTCCTATTACCACCTCAGTTCCCAAACGTGCA...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCAGTTCTCTGGGTCTCTaGGACCCAAGACTCAATTCT +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPSSLGL*DPRLNS
Trigger: AGAATTGAGTCTTGGGTCTCAGAGACCCAGAGAACT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCAAAGATCTCGGCAACTaGCATCCAAAGAGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPKDLGN*HPKSQS
Trigger: AGACTGGCTCTTTGGATGGCAGTTGCCGAGATCTTT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAATGCCCAGGACTGGCCTaGTGGTCAGCAGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKCPGLA*WSAVHA
Trigger: GGCATGGACTGCTGACCAGCAGGCCAGTCCTGGGCA...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCGCTCGGGTCCAGACTaGGTTCCGGACCTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHRSGPD*VPDLRP
Trigger: GGGGCGGAGGTCCGGAACCCAGTCTGGACCCGAGCG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCAATACTCTTGAGCTGTaGCAAGGGCTGCTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPNTLEL*QGLLLK
Trigger: CTTTAGCAGCAGCCCTTGCCACAGCTCAAGAGTATT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCTGGCTGCTTACCAATTaGGGGTGTGTCAAATGGAAG +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPWLLTN*GCVKWK
Trigger: CTTCCATTTGACACACCCCCAATTGGTAAGCAGCCA...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCGTTTCCATAGTTCTCTaGGTCTCTGAGACCCAAGAC +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPVSIVL*VSETQD
Trigger: GTCTTGGGTCTCAGAGACCCAGAGAACTATGGAAAC...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCAGGGTTTTTCCAAGCTaGAGGGTTTCCATAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPRVFPS*RVSIVL
Trigger: GAGAACTATGGAAACCCTTCAGCTTGGAAAAACCCT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCCTCTGTTACTGTTTCTaGTTCGATGGCTGGACAATG +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPLCYCF*FDGWTM
Trigger: CATTGTCCAGCCATCGAAGCAGAAACAGTAACAGAG...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCCTGCAGGCTGGTTGTTaGTGTGTTTGGGACTGCAGT +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSLQAGC*CVWDCS
Trigger: ACTGCAGTCCCAAACACAGCAACAACCAGCCTGCAG...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAACCTCCGCCCCTATCTaGCTGGCCGCGACACCGATT +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAATSAPI*LAATPI
Trigger: AATCGGTGTCGCGGCCAGCCAGATAGGGGCGGAGGT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCAGAGCATTGTTGCAGTaGTCTCTGAGAGAGACTTGT +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPRALLQ*SLRETC
Trigger: ACAAGTCTCTCTCAGAGACCACTGCAACAATGCTCT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCAGGTGTCATACAGTATaGAGAGTTCTGACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPRCHTV*RVLTCW
Trigger: CCAGCAAGTCAGAACTCTCCATACTGTATGACACCT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCATCTGCTGCCCAGGACTaGCCTGCTGGTCAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAASAAQD*PAGQQS
Trigger: GGACTGCTGACCAGCAGGCCAGTCCTGGGCAGCAGA...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCCTCATAAAAAGGCTATaGTCCCTTGGATTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPLIKRL*SLGFAG
Trigger: GCCAGCAAATCCAAGGGACCATAGCCTTTTTATGAG...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTCCCAGCACTTGTAGCTaGGGTAGTACTGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTPSTCS*GSTACS
Trigger: GCTACAGGCAGTACTACCTCAGCTACAAGTGCTGGG...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCCAAAGTTCCTTTCCTTaGCCTCCTGACAGTAACTAT +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPQSSFP*PPDSNY
Trigger: ATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTG...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCGCCACTAATGATGGCTaGTTACCAATTGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSATNDG*LPIGGV
Trigger: CACACCCCCAATTGGTAAGCAGCCATCATTAGTGGC...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCTTCCTCTTTATCACTTaGTGTGGATTTCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPFLFIT*CGFPST
Trigger: AGTGCTGGGAAATCCACAGCAAGTGATAAAGAGGAA...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCTTCTGCTTCGATGGCTaGACAATGGGAAGACCTGTC +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSFCFDG*TMGRPV
Trigger: GACAGGTCTTCCCATTGTCCAGCCATCGAAGCAGAA...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACTGGCTCCACCTCAGCTaGCAGCTTGACATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHWLHLS*QLDILL
Trigger: GAGCAGAATGTCAAGCTGTCAGCTGAGGTGGAGCCA...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAATGGCTCCACCTCAGCTaGCAGCTTGACATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKWLHLS*QLDILL
Trigger: GAGCAGAATGTCAAGCTGTCAGCTGAGGTGGAGCCA...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCTGTTGCAGTGGTCTCTaGGAGAGACTTGTTAGCGAT +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSCCSGL*ERLVSD
Trigger: ATCGCTAACAAGTCTCTCTCAGAGACCACTGCAACA...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCAAAGCTTTCTTCTTCTaGCTTTTTGCACGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPKAFFF*LFARLG
Trigger: TCCCAAACGTGCAAAAAGTCAGAAGAAGAAAGCTTT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACTCTGTACTCTGCTGTaGGGCCCATTCCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKLCTLL*GPFQVI
Trigger: GATGACCTGGAATGGGCCTCACAGCAGAGTACAGAG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACCAGAGTGCTCTTTGTTaGGCGAGCTGCAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHQSALC*ASCSCW
Trigger: CCAGCAACTGCAGCTCGCTCAACAAAGAGCACTCTG...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCAAGTTACCAGTGTTCTaGAGATTTCCTCAACTTCTC +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPKLPVF*RFPQLL
Trigger: GAGAAGTTGAGGAAATCTTCAGAACACTGGTAACTT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCACTATCAGGACCTGCTaGATTTGTTTCTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPTIRTC*ICFFLS
Trigger: ACTCAGAAAGAAACAAATGCAGCAGGTCCTGATAGT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAATCTCAAAGCCCCTGCTaGAGGCTGGTTGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKSQSPC*RLVVAV
Trigger: CACAGCAACAACCAGCCTGCAGCAGGGGCTTTGAGA...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCGTTAGTAATTTGCCGTaGTTTCATTGCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPVSNLP*FHCLLL
Trigger: CAACAGCAAGCAATGAAAGCACGGCAAATTACTAAC...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCAGAAATGGCACTTGCTaGAGAGGGATTCCGAGAATG +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSRNGTC*RGIPRM
Trigger: CATTCTCGGAATCCCTCTGCAGCAAGTGCCATTTCT...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCGAAAGAAATGGCACTTaGTGCAGAGGGATTCCGAGA +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSERNGT*CRGIPR
Trigger: TCTCGGAATCCCTCTGCAGCAAGTGCCATTTCTTTC...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCTTTTCAGAAGTGCTGTaGTTACAGGATACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPFSEVL*LQDTSF
Trigger: GAAAGAGGTATCCTGTAAGCACAGCACTTCTGAAAA...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACCAGTCTCTGTACTCTaGTGTGAGGCCCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKPVSVL*CEAHSR
Trigger: CCTGGAATGGGCCTCACAGCAGAGTACAGAGACTGG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCAAAGATCTCGGCAACTaGCATCCAAAGAGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSKDLGN*HPKSQS
Trigger: AGACTGGCTCTTTGGATGGCAGTTGCCGAGATCTTT...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCACTTCCATTATCATTTaGGAGAGCCATAGGGATCAT +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPTSIII*ESHRDH
Trigger: ATGATCCCTATGGCTCTCCCAAATGATAATGGAAGT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAGCCCCTGCTGCAGGCTaGTTGTTGCTGTGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAAPAAG*LLLCLG
Trigger: TCCCAAACACAGCAACAACCAGCCTGCAGCAGGGGC...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCCTCAGCTGACAGCTTaGCATTCTGCTCCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHPQLTA*HSAPWG
Trigger: CCCCCACGGAGCAGAATGTCAAGCTGTCAGCTGAGG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCGCATTTGTTTCTTTCTaGGTAGCTACATTTTTCACC +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPAFVSF*VATFFT
Trigger: GGTGAAAAATGTAGCTACTCAGAAAGAAACAAATGC...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCGAGTCTGAACTATATTaGTTGGTGAGTTTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPESELY*LVSFQV
Trigger: TACCTGAAAACTCACCAATCAATATAGTTCAGACTC...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCACTCTGTACTCTGCTGTaGGGCCCATTCCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAALCTLL*GPFQVI
Trigger: GATGACCTGGAATGGGCCTCACAGCAGAGTACAGAG...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCATAATCAGTGACTTCTaGCTAAACATTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPIISDF*LNICGP
Trigger: TGGTCCACAAATGTTTAGTCAGAAGTCACTGATTAT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCCTCTGTTACTGTTTCTaGTTCGATGGCTGGACAATG +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSLCYCF*FDGWTM
Trigger: CATTGTCCAGCCATCGAAGCAGAAACAGTAACAGAG...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGATGCTCTTCTTCTCCTaGCCTTGGACTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKMLFFS*PWTSRA
Trigger: TGCTCTGGAAGTCCAAGGGCAGGAGAAGAAGAGCAT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACAGCAGTAGGGTGGGATaGTCTTCTTCTCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHSSRVG*SSSPAL
Trigger: AAGGGCAGGAGAAGAAGAGCATCCCACCCTACTGCT...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGGCTTCACTAGCCCCCTaGTCACTAGAAGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKASLAP*SLEDSA
Trigger: TGCTGAATCTTCTAGTGAGCAGGGGGCTAGTGAAGC...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCTGCTGTGTTTGGGACTaGAGTAACCACTATCACTGT +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSCCVWD*SNHYHC
Trigger: ACAGTGATAGTGGTTACTGCAGTCCCAAACACAGCA...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACTGCAGGCTGGTTGTTaGTGTGTTTGGGACTGCAGT +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKLQAGC*CVWDCS
Trigger: ACTGCAGTCCCAAACACAGCAACAACCAGCCTGCAG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCAACGAGTCGTCTCCTTaGTTTTGCTCTTACAGGATC +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSNESSP*FCSYRI
Trigger: GATCCTGTAAGAGCAAAAGCAAGGAGACGACTCGTT...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAAAGGCTTCCTCAGCCTaGTCCTGTTCCATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKKASSA*SCSIAA
Trigger: TGCAGCAATGGAACAGGAGCAGGCTGAGGAAGCCTT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACCCAATTCTTCTCTCCTaGCTCTGTGAGGCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHPILLS*LCEAKP
Trigger: GGGCTTTGCCTCACAGAGGCAGGAGAGAAGAATTGG...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTCTGTTTCTGCTTCGATaGCTGGACAATGGGAAGACC +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTLFLLR*LDNGKT
Trigger: GGTCTTCCCATTGTCCAGCCATCGAAGCAGAAACAG...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCAGAGCATTGTTGCAGTaGTCTCTGAGAGAGACTTGT +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSRALLQ*SLRETC
Trigger: ACAAGTCTCTCTCAGAGACCACTGCAACAATGCTCT...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGAAGGCTATGGTCCCTTaGATTTGCTGGCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKKAMVP*ICWQKR
Trigger: CCTCTTCTGCCAGCAAATCCAAGGGACCATAGCCTT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCTTGTTTTGGGACCACTaGTCCTCTGTTACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSLFWDH*SSVTVS
Trigger: AGAAACAGTAACAGAGGATCAGTGGTCCCAAAACAA...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATTTCTGAATACTCTTaGGCTGTGGCAAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTISEYS*AVARAA
Trigger: AGCAGCCCTTGCCACAGCTCAAGAGTATTCAGAAAT...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAACTTGCTGGAGAGAGTaGAGTATCACTGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKTCWRE*SITGHA
Trigger: AGCATGCCCAGTGATACTTCACTCTCTCCAGCAAGT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTCAGTATGGAGAGTTCTaGCTTGCTGGAGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTQYGEF*LAGESE
Trigger: TTCACTCTCTCCAGCAAGTCAGAACTCTCCATACTG...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGCAGTATGGAGAGTTCTaGCTTGCTGGAGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKQYGEF*LAGESE
Trigger: TTCACTCTCTCCAGCAAGTCAGAACTCTCCATACTG...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACAGCAGGAGAGCCTTGTaGCACAGGTGTCATACAGTA +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHSRRAL*HRCHTV
Trigger: TACTGTATGACACCTGTGTCACAAGGCTCTCCTGCT...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTAGTTCTCTGGGTCTCTaGGACCCAAGACTCAATTCT +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTSSLGL*DPRLNS
Trigger: AGAATTGAGTCTTGGGTCTCAGAGACCCAGAGAACT...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCAGGTCCTATCATGGGTaGCTGTTCACTATTATAGAC +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSRSYHG*LFTIID
Trigger: GTCTATAATAGTGAACAGTCACCCATGATAGGACCT...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCTCACCAGCGGCCTTTTaGTTTTTATGTGCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSSPAAF*FLCAVV
Trigger: TACAACAGCACATAAAAAGCAAAAGGCCGCTGGTGA...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAAGCAGTAGGGTGGGATaGTCTTCTTCTCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAASSRVG*SSSPAL
Trigger: AAGGGCAGGAGAAGAAGAGCATCCCACCCTACTGCT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCTCAATAAAATCTAAGTaGATTTCTGTTGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPSIKSK*ISVGSS
Trigger: CGAGGAACCAACAGAAATGCACTTAGATTTTATTGA...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCAATTTCTTGTTCCCGTaGCATGGCTATAACATTATA +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPNFLFP*HGYNII
Trigger: TATAATGTTATAGCCATGGCACGGGAACAAGAAATT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAGCCACTAATGATGGCTaGTTACCAATTGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKATNDG*LPIGGV
Trigger: CACACCCCCAATTGGTAAGCAGCCATCATTAGTGGC...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCTCCTTCTCAGTTTTGTaGCTGCTTATGGAAGCTTGT +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSSFSVL*LLMEAC
Trigger: ACAAGCTTCCATAAGCAGGCACAAAACTGAGAAGGA...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCACCAATTCTTCTCTCCTaGCTCTGTGAGGCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAPILLS*LCEAKP
Trigger: GGGCTTTGCCTCACAGAGGCAGGAGAGAAGAATTGG...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAATGGTCCCTTGGATTTaGTGGCAGAAGAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKMVPWI*WQKRYC
Trigger: GCAGTACCTCTTCTGCCAGCAAATCCAAGGGACCAT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACAGGTAGCTGGGAATTaGAGTTGGTTCCACACCAGA +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKQVAGN*SWFHTR
Trigger: TCTGGTGTGGAACCAACTCCAATTCCCAGCTACCTG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACTGTCCAAGCTGACTTaGACGCTCAGTGCATTCTGT +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKLSKLT*TLSAFC
Trigger: ACAGAATGCACTGAGCGTCCAAGTCAGCTTGGACAG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACCTGTTTCTGCTTCGATaGCTGGACAATGGGAAGACC +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHLFLLR*LDNGKT
Trigger: GGTCTTCCCATTGTCCAGCCATCGAAGCAGAAACAG...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATGCCCCTGCTGCAGGCTaGTTGTTGCTGTGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHAPAAG*LLLCLG
Trigger: TCCCAAACACAGCAACAACCAGCCTGCAGCAGGGGC...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAGATCCCAAAAGATTGTaGTCCACAGTTAAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKDPKRL*STVKRP
Trigger: GGGGCGCTTAACTGTGGACCACAATCTTTTGGGATC...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACGATCCCAAAAGATTGTaGTCCACAGTTAAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHDPKRL*STVKRP
Trigger: GGGGCGCTTAACTGTGGACCACAATCTTTTGGGATC...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTCGAGAATGTCCCATGTaGTGTGGTACCTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTRECPM*CGTFFT
Trigger: TGTGAAGAAGGTACCACACCACATGGGACATTCTCG...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGCACTGCAGAAAGAAATaGCACTTGCTGCAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKHCRKK*HLLQRD
Trigger: ATCCCTCTGCAGCAAGTGCCATTTCTTTCTGCAGTG...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCGCACTTCTACAGATATaGGTTCATGAGTATAATCTT +
Preference number: 4 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPALLQI*VHEYNL
Trigger: AAGATTATACTCATGAACCCATATCTGTAGAAGTGC...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTGTCCCTTGGATTTGCTaGCAGAAGAGGTACTGCATA +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTVPWIC*QKRYCI
Trigger: TATGCAGTACCTCTTCTGCCAGCAAATCCAAGGGAC...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR CAA 72 bp AATCAGGGCAGGGATAATACCCCTTCCTTCTCAGTTTaGTGCCTGCTTATGGAAGCTTGTAAGTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: NQGRDNTPSFSV*CLLMEACKWKT
Trigger: TGTTTTCCACTTACAAGCTTCCATAAGCAGGCACAAAACTGAGAAGGAAGGGGTATTATCCCTGCCCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACTGTTGCAGTGGTCTCTaGGAGAGACTTGTTAGCGAT +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHCCSGL*ERLVSD
Trigger: ATCGCTAACAAGTCTCTCTCAGAGACCACTGCAACA...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCATAGATGATTCCACATaGTTCATGGTCCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSIDDST*FMVPES
Trigger: TGATTCTGGGACCATGAATCATGTGGAATCATCTAT...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAATGCACGTTTGGGAACTaGGGTGGTAATAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKCTFGN*GGNRNW
Trigger: CCAATTCCTATTACCACCTCAGTTCCCAAACGTGCA...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAACTTGCTGGAGAGAGTaGAGTATCACTGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAATCWRE*SITGHA
Trigger: AGCATGCCCAGTGATACTTCACTCTCTCCAGCAAGT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAAGCAGGAGAGCCTTGTaGCACAGGTGTCATACAGTA +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAASRRAL*HRCHTV
Trigger: TACTGTATGACACCTGTGTCACAAGGCTCTCCTGCT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTGCTTCCAGTCCATCTaGAGTTTCCACCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKCFQSI*SFHHVS
Trigger: AGAAACATGGTGGAAACTTCAGATGGACTGGAAGCA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGAGGGTTTTTCCAAGCTaGAGGGTTTCCATAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKRVFPS*RVSIVL
Trigger: GAGAACTATGGAAACCCTTCAGCTTGGAAAAACCCT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCAGTCCAGGTGGTGACTaGCTAGCAAATAAAACATTT +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSSPGGD*LANKTF
Trigger: AAATGTTTTATTTGCTAGTCAGTCACCACCTGGACT...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATTCTGTCTTCTTTCTaGGGAAGTACTGTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTILSSF*GSTVSS
Trigger: CGAGGACACAGTACTTCCTCAGAAAGAAGACAGAAT...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559471.6
CDS-3UTR GCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTTGCTGTGTTTGGGACTaGAGTAACCACTATCACTGT +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTCCVWD*SNHYHC
Trigger: ACAGTGATAGTGGTTACTGCAGTCCCAAACACAGCA...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTCTCAAAGCCCCTGCTaGAGGCTGGTTGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHSQSPC*RLVVAV
Trigger: CACAGCAACAACCAGCCTGCAGCAGGGGCTTTGAGA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAAGAAATGGCACTTGCTaGAGAGGGATTCCGAGAATG +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKRNGTC*RGIPRM
Trigger: CATTCTCGGAATCCCTCTGCAGCAAGTGCCATTTCT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCCAGTCTCTGTACTCTaGTGTGAGGCCCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHPVSVL*CEAHSR
Trigger: CCTGGAATGGGCCTCACAGCAGAGTACAGAGACTGG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACTTCTTCTTCAAGCATaGCAGGTACAAGAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKLLLQA*QVQECW
Trigger: CCAGCACTCTTGTACCTGGCATGCTTGAAGAAGAAG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATAAAAGGTAATGGCTaGAACCCTTCCACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTIKGNG*NPSTAG
Trigger: TCCAGCTGTGGAAGGGTTGCAGCCATTACCTTTTAT...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTGGCAGAAGAGGTACTaGATATGCGAGAGCATTTAC +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKWQKRY*ICESIY
Trigger: GTAAATGCTCTCGCATATGCAGTACCTCTTCTGCCA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAATGGTCCCTTGGATTTaGTGGCAGAAGAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAMVPWI*WQKRYC
Trigger: GCAGTACCTCTTCTGCCAGCAAATCCAAGGGACCAT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCACTTCCATTATCATTTaGGAGAGCCATAGGGATCAT +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSTSIII*ESHRDH
Trigger: ATGATCCCTATGGCTCTCCCAAATGATAATGGAAGT...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACTGGGCACATGGTGCTaGCATCAGCTGATAATATGT +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKLGTWC*HQLIIC
Trigger: ACATATTATCAGCTGATGCCAGCACCATGTGCCCAG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGCCTGGCAAGTTACATTaGACCAATTTACACCACCTG +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKPGKLH*TNLHHL
Trigger: CAGGTGGTGTAAATTGGTCCAATGTAACTTGCCAGG...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACCACTGCAGAAAGAAATaGCACTTGCTGCAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHHCRKK*HLLQRD
Trigger: ATCCCTCTGCAGCAAGTGCCATTTCTTTCTGCAGTG...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAGTTTCCATAGTTCTCTaGGTCTCTGAGACCCAAGAC +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKVSIVL*VSETQD
Trigger: GTCTTGGGTCTCAGAGACCCAGAGAACTATGGAAAC...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACATGGTCATTGCTATGTaGAAGGTGCTCAAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHMVIAM*KVLKAR
Trigger: CCTAGCCTTGAGCACCTTCCACATAGCAATGACCAT...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACGTCCCTTGGATTTGCTaGCAGAAGAGGTACTGCATA +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHVPWIC*QKRYCI
Trigger: TATGCAGTACCTCTTCTGCCAGCAAATCCAAGGGAC...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAAAGGCTATGGTCCCTTaGATTTGCTGGCAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAKAMVP*ICWQKR
Trigger: CCTCTTCTGCCAGCAAATCCAAGGGACCATAGCCTT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
3UTR CAA 72 bp CCTCTAAGCCTTGATTATCAGGATACATGTCACAAGTaGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTA +
Preference number: 4 (lower is better)
Translates to: PLSLDYQDTCHK*CKVPFLDLLTV
Trigger: TACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATCCTGATAATCAAGGCTTAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATAAGACCTGTCCAAGCTaGCTTGGACGCTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHKTCPS*LGRSVH
Trigger: ATGCACTGAGCGTCCAAGTCAGCTTGGACAGGTCTT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACAGAAGCACAATTTTTaGTCGACTATCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKQKHNF*STIRTC
Trigger: GCAGGTCCTGATAGTCGATCAAAAATTGTGCTTCTG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACGAAATCAGTTTGCTGTaGAGCATCTACCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHEISLL*SIYQKH
Trigger: GTGCTTCTGGTAGATGCTTCACAGCAAACTGATTTC...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGCTTGTTAGCGATATCTaGTGGGAAATCAGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKLVSDI*WEISLL
Trigger: CAGCAAACTGATTTCCCATCAGATATCGCTAACAAG...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGCTCCATACTTATTTCTaGATACTCTTGAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKLHTYF*ILLSCG
Trigger: GCCACAGCTCAAGAGTATTCAGAAATAAGTATGGAG...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGAGTAACCACTGTATATaGCAGAGGTCTGGTGTTAGT +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKSNHCI*QRSGVS
Trigger: ACTAACACCAGACCTCTGTCATATACAGTGGTTACT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACTGCTTCCAGTCCATCTaGAGTTTCCACCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHCFQSI*SFHHVS
Trigger: AGAAACATGGTGGAAACTTCAGATGGACTGGAAGCA...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCAAGCTGAAACAGATCTaGATTTTCCACACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSKLKQI*IFHTVL
Trigger: AAGAACTGTGTGGAAAATTCAGATCTGTTTCAGCTT...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCATAATCAGTGACTTCTaGCTAAACATTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSIISDF*LNICGP
Trigger: TGGTCCACAAATGTTTAGTCAGAAGTCACTGATTAT...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGAGGTCCTATCATGGGTaGCTGTTCACTATTATAGAC +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKRSYHG*LFTIID
Trigger: GTCTATAATAGTGAACAGTCACCCATGATAGGACCT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACTCAAATCAAGAGTCCTaGACCAGAAGCATGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHSNQES*TRSMQE
Trigger: CTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGA...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTCAAAGTTCCTTTCCTTaGCCTCCTGACAGTAACTAT +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTQSSFP*PPDSNY
Trigger: ATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTG...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTCCTCCTCTAAGCCTTaGTTATCAGGATACATGTCA +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKSSSKP*LSGYMS
Trigger: TGACATGTATCCTGATAATCAAGGCTTAGAGGAGGA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCAGTTATCTGAATCACTaGCATCGAGCAAAGGAAATT +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSSYLNH*HRAKEI
Trigger: AATTTCCTTTGCTCGATGTCAGTGATTCAGATAACT...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGAGGTCAAGAGTTATCTaGATCACTGACATCGAGCAA +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKRSRVI*ITDIEQ
Trigger: TTGCTCGATGTCAGTGATTCAGATAACTCTTGACCT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTAGGTCAAGAGTTATCTaGATCACTGACATCGAGCAA +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTRSRVI*ITDIEQ
Trigger: TTGCTCGATGTCAGTGATTCAGATAACTCTTGACCT...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAATGTGTCCTCGGCATCTaGATCCAACCTGTGAATTAT +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKCVLGI*IQPVNY
Trigger: ATAATTCACAGGTTGGATTCAGATGCCGAGGACACA...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559471.6
CDS-3UTR GCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTCGACTATCAGGACCTaGTGCATTTGTTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKSTIRT*CICFFL
Trigger: CAGAAAGAAACAAATGCAGCAGGTCCTGATAGTCGA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTGATGGGAAATCAGTTTaGTGTGAAGCATCTACCAGA +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTDGKSV*CEASTR
Trigger: TCTGGTAGATGCTTCACAGCAAACTGATTTCCCATC...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATAAGGCTTCCTCAGCCTaGTCCTGTTCCATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHKASSA*SCSIAA
Trigger: TGCAGCAATGGAACAGGAGCAGGCTGAGGAAGCCTT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAGAAAGAAATGGCACTTaGTGCAGAGGGATTCCGAGA +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAERNGT*CRGIPR
Trigger: TCTCGGAATCCCTCTGCAGCAAGTGCCATTTCTTTC...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTTGGGTTTTTCAGAAGTaGTGTGCTTACAGGATACCT +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTWVFQK*CAYRIP
Trigger: AGGTATCCTGTAAGCACAGCACTTCTGAAAAACCCA...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTCCTTCTCAGTTTTGTaGCTGCTTATGGAAGCTTGT +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKSFSVL*LLMEAC
Trigger: ACAAGCTTCCATAAGCAGGCACAAAACTGAGAAGGA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGAAGAGGTACTGCATATaGGAGAGCATTTACCGAACA +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKKRYCI*ESIYRT
Trigger: TGTTCGGTAAATGCTCTCGCATATGCAGTACCTCTT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTAAGAGGTACTGCATATaGGAGAGCATTTACCGAACA +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTKRYCI*ESIYRT
Trigger: TGTTCGGTAAATGCTCTCGCATATGCAGTACCTCTT...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCGTTTTCCTGCACAAATaGGTAACAAGTAATCAGGTA +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSVFLHK*VTSNQV
Trigger: TACCTGATTACTTGTTACCCATTTGTGCAGGAAAAC...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCACTGGGCACATGGTGCTaGCATCAGCTGATAATATGT +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAALGTWC*HQLIIC
Trigger: ACATATTATCAGCTGATGCCAGCACCATGTGCCCAG...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTCGATGGCTGGACAATaGGAAGACCTGTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHSMAGQ*EDLSKL
Trigger: CAGCTTGGACAGGTCTTCCCATTGTCCAGCCATCGA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAAATACTCTTGAGCTGTaGCAAGGGCTGCTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAANTLEL*QGLLLK
Trigger: CTTTAGCAGCAGCCCTTGCCACAGCTCAAGAGTATT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCGGAAACAATCTCCTGTaGCAAGTCATCAATAAAATC +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSGNNLL*QVINKI
Trigger: GATTTTATTGATGACTTGCCACAGGAGATTGTTTCC...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGATGTCCCATGTGGTGTaGTACCTTCTTCACATTCTT +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKMSHVV*YLLHIL
Trigger: AAGAATGTGAAGAAGGTACCACACCACATGGGACAT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAATGGTCATTGCTATGTaGAAGGTGCTCAAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAMVIAM*KVLKAR
Trigger: CCTAGCCTTGAGCACCTTCCACATAGCAATGACCAT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCTTTTGTGCCTGCTTATaGAAGCTTGTAAGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSFCACL*KLVSGK
Trigger: TTTTCCACTTACAAGCTTCCATAAGCAGGCACAAAA...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACCTCATAAAAAGGCTATaGTCCCTTGGATTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHLIKRL*SLGFAG
Trigger: GCCAGCAAATCCAAGGGACCATAGCCTTTTTATGAG...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACTTGTTTTGGGACCACTaGTCCTCTGTTACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHLFWDH*SSVTVS
Trigger: AGAAACAGTAACAGAGGATCAGTGGTCCCAAAACAA...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCACAGAAGCACAATTTTTaGTCGACTATCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAQKHNF*STIRTC
Trigger: GCAGGTCCTGATAGTCGATCAAAAATTGTGCTTCTG...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAGAAATCAGTTTGCTGTaGAGCATCTACCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAEISLL*SIYQKH
Trigger: GTGCTTCTGGTAGATGCTTCACAGCAAACTGATTTC...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATAGATGATTCCACATaGTTCATGGTCCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTIDDST*FMVPES
Trigger: TGATTCTGGGACCATGAATCATGTGGAATCATCTAT...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAACCTGCACACATAGATaGTTCCACATGATTCATGGT +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKTCTHR*FHMIHG
Trigger: ACCATGAATCATGTGGAATCATCTATGTGTGCAGGT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTAAAGCTTTCTTCTTCTaGCTTTTTGCACGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTKAFFF*LFARLG
Trigger: TCCCAAACGTGCAAAAAGTCAGAAGAAGAAAGCTTT...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACCTCCATACTTATTTCTaGATACTCTTGAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHLHTYF*ILLSCG
Trigger: GCCACAGCTCAAGAGTATTCAGAAATAAGTATGGAG...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACAGTAACCACTGTATATaGCAGAGGTCTGGTGTTAGT +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHSNHCI*QRSGVS
Trigger: ACTAACACCAGACCTCTGTCATATACAGTGGTTACT...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAGATTTTGGTTATTGTTaGAGATGCCATTGGACTGCC +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKDFGYC*RCHWTA
Trigger: GGCAGTCCAATGGCATCTTCAACAATAACCAAAATC...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTAGTCCAGGTGGTGACTaGCTAGCAAATAAAACATTT +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTSPGGD*LANKTF
Trigger: AAATGTTTTATTTGCTAGTCAGTCACCACCTGGACT...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTCGCTTCTATGGGATTaGCTAGAGCTTAAATGCTTA +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKSLLWD*LELKCL
Trigger: TAAGCATTTAAGCTCTAGTCAATCCCATAGAAGCGA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559471.6
CDS-3UTR GCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGACTATCAGGACCTGCTaGATTTGTTTCTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKTIRTC*ICFFLS
Trigger: ACTCAGAAAGAAACAAATGCAGCAGGTCCTGATAGT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACTGGTGTTAGTAATTTaGCGTGCTTTCATTGCTTGC +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKLVLVI*RAFIAC
Trigger: GCAAGCAATGAAAGCACGGCAAATTACTAACACCAG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTAGAAATGGCACTTGCTaGAGAGGGATTCCGAGAATG +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFRNGTC*RGIPRM
Trigger: CATTCTCGGAATCCCTCTGCAGCAAGTGCCATTTCT...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR GCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTGAAAGAAATGGCACTTaGTGCAGAGGGATTCCGAGA +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFERNGT*CRGIPR
Trigger: TCTCGGAATCCCTCTGCAGCAAGTGCCATTTCTTTC...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR GCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTTTTTCAGAAGTGCTGTaGTTACAGGATACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTFSEVL*LQDTSF
Trigger: GAAAGAGGTATCCTGTAAGCACAGCACTTCTGAAAA...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAATAAAAGGTAATGGCTaGAACCCTTCCACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAIKGNG*NPSTAG
Trigger: TCCAGCTGTGGAAGGGTTGCAGCCATTACCTTTTAT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGACATGTCACAAGTTGTaGAAAGTTCCTTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKTCHKL*KVPFLD
Trigger: GTCAAGGAAAGGAACTTTGCACAACTTGTGACATGT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGAAGGAAACTGTCTATTaGACTGGTTTTCCTGCACAA +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKKETVY*TGFPAQ
Trigger: TTGTGCAGGAAAACCAGTCCAATAGACAGTTTCCTT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAGGGATAGGCAAAGTATaGTCCAGTAGGGTTTGGATT +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAGIGKV*SSRVWI
Trigger: AATCCAAACCCTACTGGACCATACTTTGCCTATCCC...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCGGTGGTAATAGGAATTaGAGTCTGAACTATATTGAT +
Preference number: 4 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSGGNRN*SLNYID
Trigger: ATCAATATAGTTCAGACTCCAATTCCTATTACCACC...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAAGAGTGAAGTATCACTaGGCATGCTTAGTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKRVKYH*ACLVQY
Trigger: ATACTGGACTAAGCATGCCCAGTGATACTTCACTCT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTCGAGAATGTCCCATGTaGTGTGGTACCTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFRECPM*CGTFFT
Trigger: TGTGAAGAAGGTACCACACCACATGGGACATTCTCG...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR CCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTCACTGCAGAAAGAAATaGCACTTGCTGCAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFHCRKK*HLLQRD
Trigger: ATCCCTCTGCAGCAAGTGCCATTTCTTTCTGCAGTG...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTGCATTTGTTTCTTTCTaGGTAGCTACATTTTTCACC +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTAFVSF*VATFFT
Trigger: GGTGAAAAATGTAGCTACTCAGAAAGAAACAAATGC...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCACTTGTTAGCGATATCTaGTGGGAAATCAGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAALVSDI*WEISLL
Trigger: CAGCAAACTGATTTCCCATCAGATATCGCTAACAAG...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGGAGTCTGAACTATATTaGTTGGTGAGTTTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKESELY*LVSFQV
Trigger: TACCTGAAAACTCACCAATCAATATAGTTCAGACTC...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTTGCTTCCAGTCCATCTaGAGTTTCCACCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFCFQSI*SFHHVS
Trigger: AGAAACATGGTGGAAACTTCAGATGGACTGGAAGCA...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTTTTCATTTAATTTTCTaGCTCCACCCCCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTFHLIF*LHPQFF
Trigger: AAAGAACTGGGGGTGGAGTCAGAAAATTAAATGAAA...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCATCCTCCTCTAAGCCTTaGTTATCAGGATACATGTCA +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAASSSKP*LSGYMS
Trigger: TGACATGTATCCTGATAATCAAGGCTTAGAGGAGGA...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTTTCTACACAGCTCCTaGACTTTCACAATTCACAAA +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKFLHSS*TFTIHK
Trigger: TTTGTGAATTGTGAAAGTTCAGGAGCTGTGTAGAAA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTTTTCTACACAGCTCCTaGACTTTCACAATTCACAAA +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTFLHSS*TFTIHK
Trigger: TTTGTGAATTGTGAAAGTTCAGGAGCTGTGTAGAAA...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGCCATGTATAAATCCATaGGTACTATTTCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKPCINP*VLFQRL
Trigger: AAGCCTCTGAAATAGTACTCATGGATTTATACATGG...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTAGTTATCTGAATCACTaGCATCGAGCAAAGGAAATT +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTSYLNH*HRAKEI
Trigger: AATTTCCTTTGCTCGATGTCAGTGATTCAGATAACT...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGAATATAAGAAACCTGTaGAAAGCCATCATCTCAAGG +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKNIRNL*KAIISR
Trigger: CCTTGAGATGATGGCTTTTCACAGGTTTCTTATATT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAAAGTTACCAGTGTTCTaGAGATTTCCTCAACTTCTC +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKKLPVF*RFPQLL
Trigger: GAGAAGTTGAGGAAATCTTCAGAACACTGGTAACTT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTAGCAAACAAACCTACTaGAGCAGAAATCTAACTTTG +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTSKQTY*SRNLTL
Trigger: CAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCT...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTGGAGTCATGAACTCTTaGAGTATCTCAATTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFGVMNS*SISIGG
Trigger: ACCCCCAATTGAGATACTTCAAGAGTTCATGACTCC...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR GCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTCCCCTAAATCTAGCTaGACAGGTGTTTTATTCTTT +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKSPKSS*TGVLFF
Trigger: AAAGAATAAAACACCTGTGCAGCTAGATTTAGGGGA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAGTTAGTAATTTGCCGTaGTTTCATTGCTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKVSNLP*FHCLLL
Trigger: CAACAGCAAGCAATGAAAGCACGGCAAATTACTAAC...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACTCCTGTTCCATTGCTaGAACCATATCTTTATATGC +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKLLFHC*NHIFIC
Trigger: GCATATAAAGATATGGTTGCAGCAATGGAACAGGAG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCATGGGTTTTTCAGAAGTaGTGTGCTTACAGGATACCT +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAWVFQK*CAYRIP
Trigger: AGGTATCCTGTAAGCACAGCACTTCTGAAAAACCCA...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCTTCTTCTTCAAGCATaGCAGGTACAAGAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHLLLQA*QVQECW
Trigger: CCAGCACTCTTGTACCTGGCATGCTTGAAGAAGAAG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGATTCTACTATTGAGCTaGACTTCTACAGATATGGGT +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKILLLS*TSTDMG
Trigger: ACCCATATCTGTAGAAGTGCAGCTCAATAGTAGAAT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAGAGTTTACATGTAAGTaGAGCAGTCATACAATCGGT +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKEFTCK*SSHTIG
Trigger: ACCGATTGTATGACTGCTGCACTTACATGTAAACTC...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACAGTAACTATGGTCATTaGTATGTGGAAGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHSNYGH*YVEGAQ
Trigger: TTGAGCACCTTCCACATAGCAATGACCATAGTTACT...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAACATGTCACAAGTTGTaGAAAGTTCCTTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKTCHKL*KVPFLD
Trigger: GTCAAGGAAAGGAACTTTGCACAACTTGTGACATGT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACCATTCACTACTCATTTaGACATTTCAATTCCCACCC +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHHSLLI*TFQFPP
Trigger: GGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATG...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATGCTGGGAATTGGAGTTaGTTCCACACCAGAAACACT +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHAGNWS*FHTRNT
Trigger: AGTGTTTCTGGTGTGGAACCAACTCCAATTCCCAGC...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGGTTTTCCTGCACAAATaGGTAACAAGTAATCAGGTA +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKVFLHK*VTSNQV
Trigger: TACCTGATTACTTGTTACCCATTTGTGCAGGAAAAC...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACAAGGAAACTGTCTATTaGACTGGTTTTCCTGCACAA +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHKETVY*TGFPAQ
Trigger: TTGTGCAGGAAAACCAGTCCAATAGACAGTTTCCTT...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACAAACTGACAAGCTCTTaGAGAAGAAGAGTCACACAT +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHKLTSS*RRRVTH
Trigger: ATGTGTGACTCTTCTTCTCCAAGAGCTTGTCAGTTT...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTGGCTGCTTACCAATTaGGGGTGTGTCAAATGGAAG +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHWLLTN*GCVKWK
Trigger: CTTCCATTTGACACACCCCCAATTGGTAAGCAGCCA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTCACTCAGGACAAGTTTaGATACTCAATCAAATCCAT +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTHSGQV*ILNQIH
Trigger: ATGGATTTGATTGAGTATCCAAACTTGTCCTGAGTG...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGGATGTTCTAACCTGTTaGCCCAACATACAGAAAATA +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKDVLTC*PNIQKI
Trigger: TATTTTCTGTATGTTGGGCCAACAGGTTAGAACATC...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACCCCATCTTCATCCTGTaGATTATTTCTTTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHPIFIL*IISLFS
Trigger: ACTGAACAAAGAAATAATTCACAGGATGAAGATGGG...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261847.7
CDS-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACTTTCATTTAATTTTCTaGCTCCACCCCCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHFHLIF*LHPQFF
Trigger: AAAGAACTGGGGGTGGAGTCAGAAAATTAAATGAAA...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACAATATAAGAAACCTGTaGAAAGCCATCATCTCAAGG +
Preference number: 4 (lower is better)
Translates to: KSISQIKSPEPEACKRTHNIRNL*KAIISR
Trigger: CCTTGAGATGATGGCTTTTCACAGGTTTCTTATATT...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTACTTGTGGGGAGTCATaGACTCTTGAAGTATCTCAA +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFTCGES*TLEVSQ
Trigger: TTGAGATACTTCAAGAGTTCATGACTCCCCACAAGT...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR GCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAAGCATTTACAGTATTTaGAGCCTGAAAGGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAASIYSI*SLKGVG
Trigger: TCCAACACCTTTCAGGCTGCAAATACTGTAAATGCT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAATCCCCTAAATCTAGCTaGACAGGTGTTTTATTCTTT +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKSPKSS*TGVLFF
Trigger: AAAGAATAAAACACCTGTGCAGCTAGATTTAGGGGA...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCATCGTCTCCTTGCTTTTaGTCTTACAGGATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAASSPCF*SYRIFL
Trigger: CAAAAAGATCCTGTAAGAGCAAAAGCAAGGAGACGA...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTTGGGTTTTTCAGAAGTaGTGTGCTTACAGGATACCT +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFWVFQK*CAYRIP
Trigger: AGGTATCCTGTAAGCACAGCACTTCTGAAAAACCCA...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR GCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAATTCTACTATTGAGCTaGACTTCTACAGATATGGGT +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKILLLS*TSTDMG
Trigger: ACCCATATCTGTAGAAGTGCAGCTCAATAGTAGAAT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAAAGGTGAAACAGTTTTaGACTCAGGACAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAKVKQF*TQDKFG
Trigger: TCCAAACTTGTCCTGAGTGCAAAACTGTTTCACCTT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTTGCTATGTGGAAGGTaGTCAAGGCTAGGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHLLCGR*SRLGAK
Trigger: TTTTGCACCTAGCCTTGAGCACCTTCCACATAGCAA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTGGCAGAAGAGGTACTaGATATGCGAGAGCATTTAC +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHWQKRY*ICESIY
Trigger: GTAAATGCTCTCGCATATGCAGTACCTCTTCTGCCA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCACATTCACTACTCATTTaGACATTTCAATTCCCACCC +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAHSLLI*TFQFPP
Trigger: GGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATG...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATGGTTGTTGCTGTGTTTaGGACTGCAGTAACCACTAT +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHGCCCV*DCSNHY
Trigger: ATAGTGGTTACTGCAGTCCCAAACACAGCAACAACC...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTGGTGGTAATAGGAATTaGAGTCTGAACTATATTGAT +
Preference number: 4 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTGGNRN*SLNYID
Trigger: ATCAATATAGTTCAGACTCCAATTCCTATTACCACC...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATAGGTGTCATACAGTATaGAGAGTTCTGACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHRCHTV*RVLTCW
Trigger: CCAGCAAGTCAGAACTCTCCATACTGTATGACACCT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTTTTGCTGTGGATTTTaGTTATTGTTGAAGATGCCA +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKFCCGF*LLLKMP
Trigger: TGGCATCTTCAACAATAACCAAAATCCACAGCAAAA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTATGTCCCATGTGGTGTaGTACCTTCTTCACATTCTT +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFMSHVV*YLLHIL
Trigger: AAGAATGTGAAGAAGGTACCACACCACATGGGACAT...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR CCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTTGGGGGTGTGTCAAATaGAAGTTTACTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFWGCVK*KFTGFF
Trigger: GAAAAACCCAGTAAACTTCCATTTGACACACCCCCA...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR CCA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGGCACTTCTACAGATATaGGTTCATGAGTATAATCTT +
Preference number: 4 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKALLQI*VHEYNL
Trigger: AAGATTATACTCATGAACCCATATCTGTAGAAGTGC...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAGATGTTCTAACCTGTTaGCCCAACATACAGAAAATA +
Preference number: 4 (lower is better)
Translates to: EKPSSQGQELSESLTSSKDVLTC*PNIQKI
Trigger: TATTTTCTGTATGTTGGGCCAACAGGTTAGAACATC...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATACCTGCACACATAGATaGTTCCACATGATTCATGGT +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHTCTHR*FHMIHG
Trigger: ACCATGAATCATGTGGAATCATCTATGTGTGCAGGT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATGATTTTGGTTATTGTTaGAGATGCCATTGGACTGCC +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHDFGYC*RCHWTA
Trigger: GGCAGTCCAATGGCATCTTCAACAATAACCAAAATC...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAACTCAATTCTACTATTaGGCTGCACTTCTACAGATA +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAATQFYY*AALLQI
Trigger: TATCTGTAGAAGTGCAGCTCAATAGTAGAATTGAGT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCATGCAAAATGTTGAGATaGAGCATAAAAGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAACKMLR*SIKGNG
Trigger: GCCATTACCTTTTATGCTTCATCTCAACATTTTGCA...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCACCATGTATAAATCCATaGGTACTATTTCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAPCINP*VLFQRL
Trigger: AAGCCTCTGAAATAGTACTCATGGATTTATACATGG...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTTTTGGCAACTCCATATaGCCACCAATCAATACTCAA +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFFGNSI*PPINTQ
Trigger: TTGAGTATTGATTGGTGGTCATATGGAGTTGCCAAA...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTCACCAGCGGCCTTTTaGTTTTTATGTGCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHSPAAF*FLCAVV
Trigger: TACAACAGCACATAAAAAGCAAAAGGCCGCTGGTGA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTCGACTATCAGGACCTaGTGCATTTGTTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHSTIRT*CICFFL
Trigger: CAGAAAGAAACAAATGCAGCAGGTCCTGATAGTCGA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATGATGGGAAATCAGTTTaGTGTGAAGCATCTACCAGA +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHDGKSV*CEASTR
Trigger: TCTGGTAGATGCTTCACAGCAAACTGATTTCCCATC...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCTGGTGTTAGTAATTTaGCGTGCTTTCATTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHLVLVI*RAFIAC
Trigger: GCAAGCAATGAAAGCACGGCAAATTACTAACACCAG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTTTTTCAGAAGTGCTGTaGTTACAGGATACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFFSEVL*LQDTSF
Trigger: GAAAGAGGTATCCTGTAAGCACAGCACTTCTGAAAA...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
38% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATAGAGTGAAGTATCACTaGGCATGCTTAGTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHRVKYH*ACLVQY
Trigger: ATACTGGACTAAGCATGCCCAGTGATACTTCACTCT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATATGTCCCATGTGGTGTaGTACCTTCTTCACATTCTT +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHMSHVV*YLLHIL
Trigger: AAGAATGTGAAGAAGGTACCACACCACATGGGACAT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTGGGGGTGTGTCAAATaGAAGTTTACTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHWGCVK*KFTGFF
Trigger: GAAAAACCCAGTAAACTTCCATTTGACACACCCCCA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTTTGAAGTATCTCAATTaGGGGTGTGTCAAATGGAAG +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFLKYLN*GCVKWK
Trigger: CTTCCATTTGACACACCCCCAATTGAGATACTTCAA...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000561428.1
3UTR CAA 72 bp CTCAAAATGGTAACATTTCCTTTAATAATTCTTGGGTaGTCCTCTAGAGGTGACCTGTCTCATAAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LKMVTFPLIILG*SSRGDLSHKKA
Trigger: AGCCTTTTTATGAGACAGGTCACCTCTAGAGGACAACCCAAGAATTATTAAAGGAAATGTTACCATTTTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTTTCTTAACTCCTTCGTaGCGATTTTACAGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SQMEIFILNSFVTILQPFFLTPS*RFYSLF
Trigger: AAAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAA...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATAGCATTTACAGTATTTaGAGCCTGAAAGGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHSIYSI*SLKGVG
Trigger: TCCAACACCTTTCAGGCTGCAAATACTGTAAATGCT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTCGTCTCCTTGCTTTTaGTCTTACAGGATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHSSPCF*SYRIFL
Trigger: CAAAAAGATCCTGTAAGAGCAAAAGCAAGGAGACGA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCTCCTGTTCCATTGCTaGAACCATATCTTTATATGC +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHLLFHC*NHIFIC
Trigger: GCATATAAAGATATGGTTGCAGCAATGGAACAGGAG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATGAGTTTACATGTAAGTaGAGCAGTCATACAATCGGT +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHEFTCK*SSHTIG
Trigger: ACCGATTGTATGACTGCTGCACTTACATGTAAACTC...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAATAAAATACCATCTCTaGAAAAACAACCTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAIKYHL*KNNLQS
Trigger: TGACTGGAGGTTGTTTTTGCAGAGATGGTATTTTAT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATAAACTGACAAGCTCTTaGAGAAGAAGAGTCACACAT +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHKLTSS*RRRVTH
Trigger: ATGTGTGACTCTTCTTCTCCAAGAGCTTGTCAGTTT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR TCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATACTCAATTCTACTATTaGGCTGCACTTCTACAGATA +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHTQFYY*AALLQI
Trigger: TATCTGTAGAAGTGCAGCTCAATAGTAGAATTGAGT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATGGAAACAATCTCCTGTaGCAAGTCATCAATAAAATC +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHGNNLL*QVINKI
Trigger: GATTTTATTGATGACTTGCCACAGGAGATTGTTTCC...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTTTGGATTGGGTTGTTaGCATCGTATATCATTGTTA +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHFGLGC*HRISLL
Trigger: TAACAATGATATACGATGGCAACAACCCAATCCAAA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTCAATAAAATCTAAGTaGATTTCTGTTGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHSIKSK*ISVGSS
Trigger: CGAGGAACCAACAGAAATGCACTTAGATTTTATTGA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR GCA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATAATTTCTTGTTCCCGTaGCATGGCTATAACATTATA +
Preference number: 4 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHNFLFP*HGYNII
Trigger: TATAATGTTATAGCCATGGCACGGGAACAAGAAATT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCACCTCAGCTGACAGCTaGACATTCTGCTCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPTSADS*TFCSVG
Trigger: CCCCACGGAGCAGAATGTCAAGCTGTCAGCTGAGGT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS CCA 90 bp TCGGCTTCACTAGCCCCCTGCTCACTAGAAGATTCAGCAGTAGGGTaGGATGCTCTTCTTCTCCTGCCCTTGGACTTCCAGAGCATTGTT +
Preference number: 5 (lower is better)
Translates to: SASLAPCSLEDSAVG*DALLLLPLDFQSIV
Trigger: AACAATGCTCTGGAAGTCCAAGGGCAGGAGAAGAAGAGCATCCCACCCTACTGCTGAATCTTCTAGTGAGCAGGGGGCTAGTGAAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS GCA 90 bp TTCACTAGCCCCCTGCTCACTAGAAGATTCAGCAGTAGGGTGGGATaGTCTTCTTCTCCTGCCCTTGGACTTCCAGAGCATTGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: FTSPLLTRRFSSRVG*SSSPALGLPEHCCS
Trigger: ACTGCAACAATGCTCTGGAAGTCCAAGGGCAGGAGAAGAAGAGCATCCCACCCTACTGCTGAATCTTCTAGTGAGCAGGGGGCTAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS GCA 90 bp TCCCAGAATCAGGATTTCTCAAAGCCCCTGCTGCAGGCTGGTTGTTaGTGTGTTTGGGACTGCAGTAACCACTATCACTGTCAATGTCGG +
Preference number: 5 (lower is better)
Translates to: SQNQDFSKPLLQAGC*CVWDCSNHYHCQCR
Trigger: CCGACATTGACAGTGATAGTGGTTACTGCAGTCCCAAACACAGCAACAACCAGCCTGCAGCAGGGGCTTTGAGAAATCCTGATTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS-3UTR CAA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCACTTCCAGAGCATTGTaGCAGTGGTCTCTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPTSRAL*QWSLRE
Trigger: CTCTCTCAGAGACCACTGCAACAATGCTCTGGAAGT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS TCA 90 bp GCAGGAGAGCCTTGTGACACAGGTGTCATACAGTATGGAGAGTTCTaGCTTGCTGGAGAGAGTGAAGTATCACTGGGCATGCTTAGTCCA +
Preference number: 5 (lower is better)
Translates to: AGEPCDTGVIQYGEF*LAGESEVSLGMLSP
Trigger: TGGACTAAGCATGCCCAGTGATACTTCACTCTCTCCAGCAAGTCAGAACTCTCCATACTGTATGACACCTGTGTCACAAGGCTCTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS GCA 90 bp CACATGATTCATGGTCCCAGAATCAGGATTTCTCAAAGCCCCTGCTaGAGGCTGGTTGTTGCTGTGTTTGGGACTGCAGTAACCACTATC +
Preference number: 5 (lower is better)
Translates to: HMIHGPRIRISQSPC*RLVVAVFGTAVTTI
Trigger: GATAGTGGTTACTGCAGTCCCAAACACAGCAACAACCAGCCTGCAGCAGGGGCTTTGAGAAATCCTGATTCTGGGACCATGAATCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS GCA 90 bp TTCCACATGATTCATGGTCCCAGAATCAGGATTTCTCAAAGCCCCTaGTGCAGGCTGGTTGTTGCTGTGTTTGGGACTGCAGTAACCACT +
Preference number: 5 (lower is better)
Translates to: FHMIHGPRIRISQSP*CRLVVAVFGTAVTT
Trigger: AGTGGTTACTGCAGTCCCAAACACAGCAACAACCAGCCTGCAGCAGGGGCTTTGAGAAATCCTGATTCTGGGACCATGAATCATGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS GCA 90 bp AAAAGATCTCGGCAACTGCCATCCAAAGAGCCAGTCTCTGTACTCTaGTGTGAGGCCCATTCCAGGTCATCTGGCTTCACTTCCTCTTTA +
Preference number: 5 (lower is better)
Translates to: KRSRQLPSKEPVSVL*CEAHSRSSGFTSSL
Trigger: TAAAGAGGAAGTGAAGCCAGATGACCTGGAATGGGCCTCACAGCAGAGTACAGAGACTGGCTCTTTGGATGGCAGTTGCCGAGATCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCGTCTCTGAGAGAGACTaGTTAGCGATATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPVSERD*LAISDG
Trigger: CCCATCAGATATCGCTAACAAGTCTCTCTCAGAGAC...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS TCA 90 bp CTGTTTCTGCTTCGATGGCTGGACAATGGGAAGACCTGTCCAAGCTaGCTTGGACGCTCAGTGCATTCTGTGGTGATAGCATTTACAGTA +
Preference number: 5 (lower is better)
Translates to: LFLLRWLDNGKTCPS*LGRSVHSVVIAFTV
Trigger: TACTGTAAATGCTATCACCACAGAATGCACTGAGCGTCCAAGTCAGCTTGGACAGGTCTTCCCATTGTCCAGCCATCGAAGCAGAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559424.1
ENST00000559471.6
CDS TCA 90 bp AGATGCCATTGGACTGCCTATTCCAGAACTAGCAGGAGAGCCTTGTaGCACAGGTGTCATACAGTATGGAGAGTTCTGACTTGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: RCHWTAYSRTSRRAL*HRCHTVWRVLTCWR
Trigger: TCTCCAGCAAGTCAGAACTCTCCATACTGTATGACACCTGTGTCACAAGGCTCTCCTGCTAGTTCTGGAATAGGCAGTCCAATGGCATCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS CCA 90 bp TCTGCTTCGATGGCTGGACAATGGGAAGACCTGTCCAAGCTGACTTaGACGCTCAGTGCATTCTGTGGTGATAGCATTTACAGTATTTGC +
Preference number: 5 (lower is better)
Translates to: SASMAGQWEDLSKLT*TLSAFCGDSIYSIC
Trigger: GCAAATACTGTAAATGCTATCACCACAGAATGCACTGAGCGTCCAAGTCAGCTTGGACAGGTCTTCCCATTGTCCAGCCATCGAAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559424.1
ENST00000559471.6
CDS CCA 90 bp AAAGAAATGGCACTTGCTGCAGAGGGATTCCGAGAATGTCCCATGTaGTGTGGTACCTTCTTCACATTCTTTAAGGCTTCCTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: KEMALAAEGFRECPM*CGTFFTFFKASSAC
Trigger: GCAGGCTGAGGAAGCCTTAAAGAATGTGAAGAAGGTACCACACCACATGGGACATTCTCGGAATCCCTCTGCAGCAAGTGCCATTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS-3UTR CAA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCCCAGAAGCACAATTTTaGATCGACTATCAGGACCTG +
Preference number: 5 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPPEAQF*IDYQDL
Trigger: CAGGTCCTGATAGTCGATCAAAAATTGTGCTTCTGG...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTGCTGCAGGCTGGTTGTaGCTGTGTTTGGGACTGCAG +
Preference number: 5 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTAAGWL*LCLGLQ
Trigger: CTGCAGTCCCAAACACAGCAACAACCAGCCTGCAGC...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTCCTGCTGCAGGCTGGTaGTTGCTGTGTTTGGGACTG +
Preference number: 5 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTPAAGW*LLCLGL
Trigger: CAGTCCCAAACACAGCAACAACCAGCCTGCAGCAGG...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCATGGAGAGTTCTGACTaGCTGGAGAGAGTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPMESSD*LERVKY
Trigger: ATACTTCACTCTCTCCAGCAAGTCAGAACTCTCCAT...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS GCA 90 bp GTAAAAGCTGTTGTTTTGGGACCACTGATCCTCTGTTACTGTTTCTaGTTCGATGGCTGGACAATGGGAAGACCTGTCCAAGCTGACTTG +
Preference number: 5 (lower is better)
Translates to: VKAVVLGPLILCYCF*FDGWTMGRPVQADL
Trigger: CAAGTCAGCTTGGACAGGTCTTCCCATTGTCCAGCCATCGAAGCAGAAACAGTAACAGAGGATCAGTGGTCCCAAAACAACAGCTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559424.1
ENST00000559471.6
CDS-3UTR CAA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACCCTGCTGCAGGCTGGTaGTTGCTGTGTTTGGGACTG +
Preference number: 5 (lower is better)
Translates to: KSISQIKSPEPEACKRTHPAAGW*LLCLGL
Trigger: CAGTCCCAAACACAGCAACAACCAGCCTGCAGCAGG...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCTCTGGTGTTAGTAATTaGCCGTGCTTTCATTGCTTG +
Preference number: 5 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPSGVSN*PCFHCL
Trigger: CAAGCAATGAAAGCACGGCAAATTACTAACACCAGA...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCTCGGATCCCAAAAGATaGTGGTCCACAGTTAAGCGC +
Preference number: 5 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSSDPKR*WSTVKR
Trigger: GCGCTTAACTGTGGACCACAATCTTTTGGGATCCGA...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCTCTTACAGGATCTTTTaGGTAGATGCGTTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPSYRIF*VDAFLE
Trigger: TTCCAGGAACGCATCTACCAAAAAGATCCTGTAAGA...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCGCACTCAGGACAAGTTaGGATACTCAATCAAATCCA +
Preference number: 5 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPALRTS*DTQSNP
Trigger: TGGATTTGATTGAGTATCCAAACTTGTCCTGAGTGC...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS GCA 90 bp AGAGATCGGTTCAGAAATAACACTGCAGAAAGAAATGGCACTTGCTaGAGAGGGATTCCGAGAATGTCCCATGTGGTGTGGTACCTTCTT +
Preference number: 5 (lower is better)
Translates to: RDRFRNNTAERNGTC*RGIPRMSHVVWYLL
Trigger: AAGAAGGTACCACACCACATGGGACATTCTCGGAATCCCTCTGCAGCAAGTGCCATTTCTTTCTGCAGTGTTATTTCTGAACCGATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
ENST00000561428.1
CDS GCA 90 bp TTCAGAGATCGGTTCAGAAATAACACTGCAGAAAGAAATGGCACTTaGTGCAGAGGGATTCCGAGAATGTCCCATGTGGTGTGGTACCTT +
Preference number: 5 (lower is better)
Translates to: FRDRFRNNTAERNGT*CRGIPRMSHVVWYL
Trigger: AAGGTACCACACCACATGGGACATTCTCGGAATCCCTCTGCAGCAAGTGCCATTTCTTTCTGCAGTGTTATTTCTGAACCGATCTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
ENST00000561428.1
CDS GCA 90 bp GCACTTGTAGCTGAGGTAGTACTGCCTGTAGCCACTAATGATGGCTaGTTACCAATTGGGGGTGTGTCAAATGGAAGTTTACTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: ALVAEVVLPVATNDG*LPIGGVSNGSLLGF
Trigger: AAAACCCAGTAAACTTCCATTTGACACACCCCCAATTGGTAAGCAGCCATCATTAGTGGCTACAGGCAGTACTACCTCAGCTACAAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS CCA 90 bp TTTGGGAGAGCCATAGGGATCATAAATGTATCAGGACTCTTCTTCTaGGGAATAAATGGCTCCACCTCAGCTGACAGCTTGACATTCTGC +
Preference number: 5 (lower is better)
Translates to: FGRAIGIINVSGLFF*GINGSTSADSLTFC
Trigger: GCAGAATGTCAAGCTGTCAGCTGAGGTGGAGCCATTTATTCCCCAGAAGAAGAGTCCTGATACATTTATGATCCCTATGGCTCTCCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000557923.1
ENST00000559424.1
ENST00000559471.6
CDS CCA 90 bp GACCATTCCATGAGAAGAGGAGAAAGGGGGAGCTCCTTACCTTCCTaGGAAACAATCTCCTGTGGCAAGTCATCAATAAAATCTAAGTGC +
Preference number: 5 (lower is better)
Translates to: DHSMRRGERGSSLPS*ETISCGKSSIKSKC
Trigger: GCACTTAGATTTTATTGATGACTTGCCACAGGAGATTGTTTCCCAGGAAGGTAAGGAGCTCCCCCTTTCTCCTCTTCTCATGGAATGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559198.1
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAACCTCAGCTGACAGCTaGACATTCTGCTCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAATSADS*TFCSVG
Trigger: CCCCACGGAGCAGAATGTCAAGCTGTCAGCTGAGGT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTCAGGTAGCTGGGAATaGGAGTTGGTTCCACACCAG +
Preference number: 5 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKSGSWE*ELVPHQ
Trigger: CTGGTGTGGAACCAACTCCAATTCCCAGCTACCTGA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACCCTGTCCAAGCTGACTaGGACGCTCAGTGCATTCTG +
Preference number: 5 (lower is better)
Translates to: KSISQIKSPEPEACKRTHPVQAD*DAQCIL
Trigger: CAGAATGCACTGAGCGTCCAAGTCAGCTTGGACAGG...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCGCCTGGCAAGTTACATaGGACCAATTTACACCACCT +
Preference number: 5 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSAWQVT*DQFTPP
Trigger: AGGTGGTGTAAATTGGTCCAATGTAACTTGCCAGGC...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GTAGCATTCACTACTCATTTGCACATTTCAATTCCCACCCCTCCCTCCTCCCCCGACTCAATTCTACTATaGAGCTGCACTTCTACAGAT +
Preference number: 5 (lower is better)
Translates to: VAFTTHLHISIPTPPSSPDSILL*SCTSTD
Trigger: ATCTGTAGAAGTGCAGCTCAATAGTAGAATTGAGTC...GGGGGAGGAGGGAGGGGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCATTGAGCGAGCTGCAGTaGCTGGACTTCTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAALSELQ*LDFCCP
Trigger: TGGGCAGCAGAAGTCCAGCAACTGCAGCTCGCTCAA...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCCCTTCCTTCTCAGTTTaGTGCCTGCTTATGGAAGCT +
Preference number: 5 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSPSFSV*CLLMEA
Trigger: AGCTTCCATAAGCAGGCACAAAACTGAGAAGGAAGG...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS TCA 90 bp TGCTCTACATTGTCTTCCTCAGAACCATTAAGGGTTTTTCCAAGCTaGAGGGTTTCCATAGTTCTCTGGGTCTCTGAGACCCAAGACTCA +
Preference number: 5 (lower is better)
Translates to: CSTLSSSEPLRVFPS*RVSIVLWVSETQDS
Trigger: TGAGTCTTGGGTCTCAGAGACCCAGAGAACTATGGAAACCCTTCAGCTTGGAAAAACCCTTAATGGTTCTGAGGAAGACAATGTAGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS GCA 90 bp AGGTGTAGGAAAAGGATGATAGAAACCCATAACCTGGGCACATGGTaGTGGCATCAGCTGATAATATGTATACTCTGTAGAAACAGGCGG +
Preference number: 5 (lower is better)
Translates to: RCRKRMIETHNLGTW*WHQLIICILCRNRR
Trigger: CCGCCTGTTTCTACAGAGTATACATATTATCAGCTGATGCCAGCACCATGTGCCCAGGTTATGGGTTTCTATCATCCTTTTCCTACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000559424.1
ENST00000559471.6
CDS CCA 90 bp TGTAGGAAAAGGATGATAGAAACCCATAACCTGGGCACATGGTGCTaGCATCAGCTGATAATATGTATACTCTGTAGAAACAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: CRKRMIETHNLGTWC*HQLIICILCRNRRL
Trigger: CAGCCGCCTGTTTCTACAGAGTATACATATTATCAGCTGATGCCAGCACCATGTGCCCAGGTTATGGGTTTCTATCATCCTTTTCCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000559424.1
ENST00000559471.6
CDS-3UTR CAA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACTCAGGTAGCTGGGAATaGGAGTTGGTTCCACACCAG +
Preference number: 5 (lower is better)
Translates to: KSISQIKSPEPEACKRTHSGSWE*ELVPHQ
Trigger: CTGGTGTGGAACCAACTCCAATTCCCAGCTACCTGA...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCGTAAAAGCTGTTGTTTaGGGACCACTGATCCTCTGT +
Preference number: 5 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSVKAVV*GPLILC
Trigger: ACAGAGGATCAGTGGTCCCAAAACAACAGCTTTTAC...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTTGGACTTCCAGAGCATaGTTGCAGTGGTCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTWTSRA*LQWSLR
Trigger: TCTCAGAGACCACTGCAACAATGCTCTGGAAGTCCA...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTCTAACAGGAACCAGCTaGTTCACACAGCGTCCTAGA +
Preference number: 5 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTLTGTS*FTQRPR
Trigger: TCTAGGACGCTGTGTGAACAAGCTGGTTCCTGTTAG...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTATGGTCCCTTGGATTaGCTGGCAGAAGAGGTACTG +
Preference number: 5 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKYGPLD*LAEEVL
Trigger: CAGTACCTCTTCTGCCAGCAAATCCAAGGGACCATA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGAAAGGCTATGGTCCCTaGGATTTGCTGGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKKGYGP*DLLAEE
Trigger: CTCTTCTGCCAGCAAATCCAAGGGACCATAGCCTTT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS TCA 90 bp AAGGGTTTTTCCAAGCTGAAGGGTTTCCATAGTTCTCTGGGTCTCTaGGACCCAAGACTCAATTCTACTATTGAGCTGCACTTCTACAGA +
Preference number: 5 (lower is better)
Translates to: KGFSKLKGFHSSLGL*DPRLNSTIELHFYR
Trigger: TCTGTAGAAGTGCAGCTCAATAGTAGAATTGAGTCTTGGGTCTCAGAGACCCAGAGAACTATGGAAACCCTTCAGCTTGGAAAAACCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS GCA 90 bp GCTGCAGTAACCACTGTATATGACAGAGGTCTGGTGTTAGTAATTTaGCGTGCTTTCATTGCTTGCTGTTGTTTTTCCAGAGCAGCTAAC +
Preference number: 5 (lower is better)
Translates to: AAVTTVYDRGLVLVI*RAFIACCCFSRAAN
Trigger: GTTAGCTGCTCTGGAAAAACAACAGCAAGCAATGAAAGCACGGCAAATTACTAACACCAGACCTCTGTCATATACAGTGGTTACTGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS GCA 90 bp AGCTTTCCTTCCAAGGGCAAACACAAAAGGAATTTCTTGTTCCCGTaGCATGGCTATAACATTATAGAGAGCCTCATCCAGACCACCTTT +
Preference number: 5 (lower is better)
Translates to: SFPSKGKHKRNFLFP*HGYNIIESLIQTTF
Trigger: AAAGGTGGTCTGGATGAGGCTCTCTATAATGTTATAGCCATGGCACGGGAACAAGAAATTCCTTTTGTGTTTGCCCTTGGAAGGAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS GCA 90 bp ATGTGGTGTGGTACCTTCTTCACATTCTTTAAGGCTTCCTCAGCCTaGTCCTGTTCCATTGCTGCAACCATATCTTTATATGCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: MWCGTFFTFFKASSA*SCSIAATISLYAFL
Trigger: CAGGAAAGCATATAAAGATATGGTTGCAGCAATGGAACAGGAGCAGGCTGAGGAAGCCTTAAAGAATGTGAAGAAGGTACCACACCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS CCA 90 bp CTGCACAAATGGGTAACAAGTAATCAGGTAGCTGGGAATTGGAGTTaGTTCCACACCAGAAACACTTCCATTATCATTTGGGAGAGCCAT +
Preference number: 5 (lower is better)
Translates to: LHKWVTSNQVAGNWS*FHTRNTSIIIWESH
Trigger: ATGGCTCTCCCAAATGATAATGGAAGTGTTTCTGGTGTGGAACCAACTCCAATTCCCAGCTACCTGATTACTTGTTACCCATTTGTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000557923.1
ENST00000559424.1
ENST00000559471.6
CDS CCA 90 bp TGTAGAAACAGGCGGCTGAGCAGATATAATGGGATAGGCAAAGTATaGTCCAGTAGGGTTTGGATTGGGTTGTTGCCATCGTATATCATT +
Preference number: 5 (lower is better)
Translates to: CRNRRLSRYNGIGKV*SSRVWIGLLPSYII
Trigger: AATGATATACGATGGCAACAACCCAATCCAAACCCTACTGGACCATACTTTGCCTATCCCATTATATCTGCTCAGCCGCCTGTTTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000559424.1
ENST00000559471.6
CDS-3UTR CAA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGCCAGTAGGGTTTGGATaGGGTTGTTGCCATCGTATA +
Preference number: 5 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKPVGFG*GCCHRI
Trigger: TATACGATGGCAACAACCCAATCCAAACCCTACTGG...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACTGGACTTCCAGAGCATaGTTGCAGTGGTCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: KSISQIKSPEPEACKRTHWTSRA*LQWSLR
Trigger: TCTCAGAGACCACTGCAACAATGCTCTGGAAGTCCA...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACTTCTTCTCCTGCCCTaGGACTTCCAGAGCATTGTT +
Preference number: 5 (lower is better)
Translates to: EKPSSQGQELSESLTSSKLLLLP*DFQSIV
Trigger: AACAATGCTCTGGAAGTCCAAGGGCAGGAGAAGAAG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATGCTGCAGGCTGGTTGTaGCTGTGTTTGGGACTGCAG +
Preference number: 5 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHAAGWL*LCLGLQ
Trigger: CTGCAGTCCCAAACACAGCAACAACCAGCCTGCAGC...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACTCGGATCCCAAAAGATaGTGGTCCACAGTTAAGCGC +
Preference number: 5 (lower is better)
Translates to: KSISQIKSPEPEACKRTHSDPKR*WSTVKR
Trigger: GCGCTTAACTGTGGACCACAATCTTTTGGGATCCGA...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACAGAAAGAAATGGCACTaGCTGCAGAGGGATTCCGAG +
Preference number: 5 (lower is better)
Translates to: KSISQIKSPEPEACKRTHRKKWH*LQRDSE
Trigger: CTCGGAATCCCTCTGCAGCAAGTGCCATTTCTTTCT...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAAGAAAGAAATGGCACTaGCTGCAGAGGGATTCCGAG +
Preference number: 5 (lower is better)
Translates to: EKPSSQGQELSESLTSSKRKKWH*LQRDSE
Trigger: CTCGGAATCCCTCTGCAGCAAGTGCCATTTCTTTCT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGCTTCCTCTTTATCACTaGCTGTGGATTTCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKLPLYH*LWISQH
Trigger: GTGCTGGGAAATCCACAGCAAGTGATAAAGAGGAAG...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTTGAGCGAGCTGCAGTaGCTGGACTTCTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHLSELQ*LDFCCP
Trigger: TGGGCAGCAGAAGTCCAGCAACTGCAGCTCGCTCAA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAAAAGGCTATGGTCCCTaGGATTTGCTGGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: EKPSSQGQELSESLTSSKKGYGP*DLLAEE
Trigger: CTCTTCTGCCAGCAAATCCAAGGGACCATAGCCTTT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCTTAATAATTCTTGGGTaGTCCTCTAGAGGTGACCTG +
Preference number: 5 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSLIILG*SSRGDL
Trigger: CAGGTCACCTCTAGAGGACAACCCAAGAATTATTAA...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS GCA 90 bp ACTTGGACGCTCAGTGCATTCTGTGGTGATAGCATTTACAGTATTTaGAGCCTGAAAGGTGTTGGAGTAAGGTGTAGGAAAAGGATGATA +
Preference number: 5 (lower is better)
Translates to: TWTLSAFCGDSIYSI*SLKGVGVRCRKRMI
Trigger: TATCATCCTTTTCCTACACCTTACTCCAACACCTTTCAGGCTGCAAATACTGTAAATGCTATCACCACAGAATGCACTGAGCGTCCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000559424.1
ENST00000559471.6
CDS CCA 90 bp GGGAATTGGAGTTGGTTCCACACCAGAAACACTTCCATTATCATTTaGGAGAGCCATAGGGATCATAAATGTATCAGGACTCTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: GNWSWFHTRNTSIII*ESHRDHKCIRTLLL
Trigger: CAGAAGAAGAGTCCTGATACATTTATGATCCCTATGGCTCTCCCAAATGATAATGGAAGTGTTTCTGGTGTGGAACCAACTCCAATTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000557923.1
ENST00000559424.1
ENST00000559471.6
CDS CCA 90 bp GTTTTCCTGCACAAATGGGTAACAAGTAATCAGGTAGCTGGGAATTaGAGTTGGTTCCACACCAGAAACACTTCCATTATCATTTGGGAG +
Preference number: 5 (lower is better)
Translates to: VFLHKWVTSNQVAGN*SWFHTRNTSIIIWE
Trigger: CTCCCAAATGATAATGGAAGTGTTTCTGGTGTGGAACCAACTCCAATTCCCAGCTACCTGATTACTTGTTACCCATTTGTGCAGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000557923.1
ENST00000559424.1
ENST00000559471.6
CDS CCA 90 bp GTAAGGTGTAGGAAAAGGATGATAGAAACCCATAACCTGGGCACATaGTGCTGGCATCAGCTGATAATATGTATACTCTGTAGAAACAGG +
Preference number: 5 (lower is better)
Translates to: VRCRKRMIETHNLGT*CWHQLIICILCRNR
Trigger: CCTGTTTCTACAGAGTATACATATTATCAGCTGATGCCAGCACCATGTGCCCAGGTTATGGGTTTCTATCATCCTTTTCCTACACCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000559424.1
ENST00000559471.6
CDS CCA 90 bp ATGATGGCTGCTTACCAATTGGGGGTGTGTCAAATGGAAGTTTACTaGGTTTTTCAGAAGTGCTGTGCTTACAGGATACCTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: MMAAYQLGVCQMEVY*VFQKCCAYRIPLSH
Trigger: ATGAGAAAGAGGTATCCTGTAAGCACAGCACTTCTGAAAAACCCAGTAAACTTCCATTTGACACACCCCCAATTGGTAAGCAGCCATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS CCA 90 bp CATTTACAGTATTTGCAGCCTATTGGACTGGTTTTCCTGCACAAATaGGTAACAAGTAATCAGGTAGCTGGGAATTGGAGTTGGTTCCAC +
Preference number: 5 (lower is better)
Translates to: HLQYLQPIGLVFLHK*VTSNQVAGNWSWFH
Trigger: GTGGAACCAACTCCAATTCCCAGCTACCTGATTACTTGTTACCCATTTGTGCAGGAAAACCAGTCCAATAGGCTGCAAATACTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380927.6
CDS-3UTR CAA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCCTGTCCAAGCTGACTaGGACGCTCAGTGCATTCTG +
Preference number: 5 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHPVQAD*DAQCIL
Trigger: CAGAATGCACTGAGCGTCCAAGTCAGCTTGGACAGG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTTTCACCAGCGGCCTTTaGCTTTTTATGTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTFTSGL*LFMCCC
Trigger: ACAACAGCACATAAAAAGCAAAAGGCCGCTGGTGAA...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAACTTCCAGAGCATTGTaGCAGTGGTCTCTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAATSRAL*QWSLRE
Trigger: CTCTCTCAGAGACCACTGCAACAATGCTCTGGAAGT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTCTTCTTCTGACTTTTaGCACGTTTGGGAACTGAGG +
Preference number: 5 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKSSSDF*HVWELR
Trigger: CCTCAGTTCCCAAACGTGCAAAAAGTCAGAAGAAGA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGCTAAGTGCATTTCTGTaGGTTCCTCGGATCCCAAAA +
Preference number: 5 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKLSAFL*VPRIPK
Trigger: TTTTGGGATCCGAGGAACCAACAGAAATGCACTTAG...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGTTGTTGAAGATGCCATaGGACTGCCTATTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKLLKMP*DCLFQN
Trigger: GTTCTGGAATAGGCAGTCCAATGGCATCTTCAACAA...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GTGCAGCAGTCATACAATCGGTTACAGTTATTCACCTGTCAACATGTGCCTAGCTGTGGATTTTGGTTATaGTTGAAGATGCCATTGGAC +
Preference number: 5 (lower is better)
Translates to: VQQSYNRLQLFTCQHVPSCGFWL*LKMPLD
Trigger: GTCCAATGGCATCTTCAACAATAACCAAAATCCACA...GCTAGGCACATGTTGACAGGTGAATAACTGTAACCGATTGTATGACTGCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTCCTGCTCCTGTTCCATaGCTGCAACCATATCTTTAT +
Preference number: 5 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTPAPVP*LQPYLY
Trigger: ATAAAGATATGGTTGCAGCAATGGAACAGGAGCAGG...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACATGGCTGCTTACCAATaGGGGGTGTGTCAAATGGAA +
Preference number: 5 (lower is better)
Translates to: KSISQIKSPEPEACKRTHMAAYQ*GVCQME
Trigger: TTCCATTTGACACACCCCCAATTGGTAAGCAGCCAT...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACCTTCCTCTTTATCACTaGCTGTGGATTTCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: KSISQIKSPEPEACKRTHLPLYH*LWISQH
Trigger: GTGCTGGGAAATCCACAGCAAGTGATAAAGAGGAAG...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTTTCCTCTTCTCCACTTaGCTCTACATTGTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTFLFST*LYIVFL
Trigger: GAGGAAGACAATGTAGAGCAAAGTGGAGAAGAGGAA...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTAAAGGAAACTGTCTATaGGACTGGTTTTCCTGCACA +
Preference number: 5 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTKGNCL*DWFSCT
Trigger: TGTGCAGGAAAACCAGTCCAATAGACAGTTTCCTTT...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGAGGGTTTGGATTGGGTaGTTGCCATCGTATATCATT +
Preference number: 5 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKRVWIG*LPSYII
Trigger: AATGATATACGATGGCAACAACCCAATCCAAACCCT...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCACCAGTAGGGTTTGGATaGGGTTGTTGCCATCGTATA +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAPVGFG*GCCHRI
Trigger: TATACGATGGCAACAACCCAATCCAAACCCTACTGG...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACGTAAAAGCTGTTGTTTaGGGACCACTGATCCTCTGT +
Preference number: 5 (lower is better)
Translates to: KSISQIKSPEPEACKRTHVKAVV*GPLILC
Trigger: ACAGAGGATCAGTGGTCCCAAAACAACAGCTTTTAC...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAGTCTCTGAGAGAGACTaGTTAGCGATATCTGATGGG +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAVSERD*LAISDG
Trigger: CCCATCAGATATCGCTAACAAGTCTCTCTCAGAGAC...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAGCCTGGCAAGTTACATaGGACCAATTTACACCACCT +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAAWQVT*DQFTPP
Trigger: AGGTGGTGTAAATTGGTCCAATGTAACTTGCCAGGC...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCACCGTGCTTTCATTGCTaGCTGTTGTTTTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAPCFHC*LLFFQS
Trigger: GCTCTGGAAAAACAACAGCAAGCAATGAAAGCACGG...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAATTGTTGAAGATGCCATaGGACTGCCTATTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: EKPSSQGQELSESLTSSKLLKMP*DCLFQN
Trigger: GTTCTGGAATAGGCAGTCCAATGGCATCTTCAACAA...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTGTCGTCTCCTTGCTTTaGCTCTTACAGGATCTTTTT +
Preference number: 5 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTVVSLL*LLQDLF
Trigger: AAAAAGATCCTGTAAGAGCAAAAGCAAGGAGACGAC...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTAGAAAGAAATGGCACTaGCTGCAGAGGGATTCCGAG +
Preference number: 5 (lower is better)
Translates to: SQMEIFILNSFVTILQPFRKKWH*LQRDSE
Trigger: CTCGGAATCCCTCTGCAGCAAGTGCCATTTCTTTCT...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAATGGCTGCTTACCAATaGGGGGTGTGTCAAATGGAA +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAMAAYQ*GVCQME
Trigger: TTCCATTTGACACACCCCCAATTGGTAAGCAGCCAT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGCCACTTTGCTCTACATaGTCTTCCTCAGAACCATTA +
Preference number: 5 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKPLCST*SSSEPL
Trigger: TAATGGTTCTGAGGAAGACAATGTAGAGCAAAGTGG...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTCCACTTTGCTCTACATaGTCTTCCTCAGAACCATTA +
Preference number: 5 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTPLCST*SSSEPL
Trigger: TAATGGTTCTGAGGAAGACAATGTAGAGCAAAGTGG...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACTTCCTCTTCTCCACTTaGCTCTACATTGTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: KSISQIKSPEPEACKRTHFLFST*LYIVFL
Trigger: GAGGAAGACAATGTAGAGCAAAGTGGAGAAGAGGAA...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTGCATTCACTACTCATTaGCACATTTCAATTCCCACC +
Preference number: 5 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTAFTTH*HISIPT
Trigger: GGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGC...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS TCA 90 bp CTTTTGCTCTTACAGGATCTTTTTGGTAGATGCGTTCCTGGAAACTaGCAAGCTCTTGGAGAAGAAGAGTCACACATTCATCAATCTCTT +
Preference number: 5 (lower is better)
Translates to: LLLLQDLFGRCVPGN*QALGEEESHIHQSL
Trigger: AAGAGATTGATGAATGTGTGACTCTTCTTCTCCAAGAGCTTGTCAGTTTCCAGGAACGCATCTACCAAAAAGATCCTGTAAGAGCAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559122.1
ENST00000559471.6
CDS GCA 90 bp CTAATGATATCACCTGTATATGACAGAGGTCTGGTGTTAGTAATTTaGCGTGCTTTCATTGCTTGCTGTTGTTTTTCCAGAGCAGCTAAC +
Preference number: 5 (lower is better)
Translates to: LMISPVYDRGLVLVI*RAFIACCCFSRAAN
Trigger: GTTAGCTGCTCTGGAAAAACAACAGCAAGCAATGAAAGCACGGCAAATTACTAACACCAGACCTCTGTCATATACAGGTGATATCATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561203.1
CDS CCA 90 bp ACTCTTGAAGTATCTCAATTGGGGGTGTGTCAAATGGAAGTTTACTaGGTTTTTCAGAAGTGCTGTGCTTACAGGATACCTCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: TLEVSQLGVCQMEVY*VFQKCCAYRIPLSH
Trigger: ATGAGAAAGAGGTATCCTGTAAGCACAGCACTTCTGAAAAACCCAGTAAACTTCCATTTGACACACCCCCAATTGAGATACTTCAAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR CAA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAAGGGTTTGGATTGGGTaGTTGCCATCGTATATCATT +
Preference number: 5 (lower is better)
Translates to: EKPSSQGQELSESLTSSKRVWIG*LPSYII
Trigger: AATGATATACGATGGCAACAACCCAATCCAAACCCT...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCATTCACCAGCGGCCTTTaGCTTTTTATGTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAFTSGL*LFMCCC
Trigger: ACAACAGCACATAAAAAGCAAAAGGCCGCTGGTGAA...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCTTCTTCTCCTGCCCTaGGACTTCCAGAGCATTGTT +
Preference number: 5 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHLLLLP*DFQSIV
Trigger: AACAATGCTCTGGAAGTCCAAGGGCAGGAGAAGAAG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCATCTTCTTCTGACTTTTaGCACGTTTGGGAACTGAGG +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAASSSDF*HVWELR
Trigger: CCTCAGTTCCCAAACGTGCAAAAAGTCAGAAGAAGA...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAATTTGCCGTGCTTTCATaGCTTGCTGTTGTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: EKPSSQGQELSESLTSSKFAVLS*LAVVFP
Trigger: TGGAAAAACAACAGCAAGCAATGAAAGCACGGCAAA...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACTTTGCCGTGCTTTCATaGCTTGCTGTTGTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: KSISQIKSPEPEACKRTHFAVLS*LAVVFP
Trigger: TGGAAAAACAACAGCAAGCAATGAAAGCACGGCAAA...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCACTAAGTGCATTTCTGTaGGTTCCTCGGATCCCAAAA +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAALSAFL*VPRIPK
Trigger: TTTTGGGATCCGAGGAACCAACAGAAATGCACTTAG...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAAGGATTTTGGTTATTGTaGAAGATGCCATTGGACTGC +
Preference number: 5 (lower is better)
Translates to: EKPSSQGQELSESLTSSKGFWLL*KMPLDC
Trigger: GCAGTCCAATGGCATCTTCAACAATAACCAAAATCC...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAGAAACTGACAAGCTCTaGGAGAAGAAGAGTCACACA +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAETDKL*EKKSHT
Trigger: TGTGTGACTCTTCTTCTCCAAGAGCTTGTCAGTTTC...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACTCTTACAGGATCTTTTaGGTAGATGCGTTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: KSISQIKSPEPEACKRTHSYRIF*VDAFLE
Trigger: TTCCAGGAACGCATCTACCAAAAAGATCCTGTAAGA...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAATCCATATCTCAAATCAAGAGTCCTGAACCAGAAGCATGCAAGAGAACACACGTCGTCTCCTTGCTTTaGCTCTTACAGGATCTTTTT +
Preference number: 5 (lower is better)
Translates to: KSISQIKSPEPEACKRTHVVSLL*LLQDLF
Trigger: AAAAAGATCCTGTAAGAGCAAAAGCAAGGAGACGAC...GTGTGTTCTCTTGCATGCTTCTGGTTCAGGACTCTTGATTTGAGATATGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGGATACATGTCACAAGTaGTGCAAAGTTCCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKDTCHK*CKVPFL
Trigger: AAGGAAAGGAACTTTGCACAACTTGTGACATGTATC...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GATACATGTCACAAGTTGTGCAAAGTTCCTTTCCTTGACCTCCTGACAGTAACTGATACATGTCACAAGTaGTGCAAAGTTCCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: DTCHKLCKVPFLDLLTVTDTCHK*CKVPFL
Trigger: AAGGAAAGGAACTTTGCACAACTTGTGACATGTATC...AGTTACTGTCAGGAGGTCAAGGAAAGGAACTTTGCACAACTTGTGACATGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAATTAATAATTCTTGGGTaGTCCTCTAGAGGTGACCTG +
Preference number: 5 (lower is better)
Translates to: EKPSSQGQELSESLTSSKLIILG*SSRGDL
Trigger: CAGGTCACCTCTAGAGGACAACCCAAGAATTATTAA...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS TCA 90 bp AGAGACAAACAGCAAATTGCTCAGACTAATGATATCACCTGTATATaGCAGAGGTCTGGTGTTAGTAATTTGCCGTGCTTTCATTGCTTG +
Preference number: 5 (lower is better)
Translates to: RDKQQIAQTNDITCI*QRSGVSNLPCFHCL
Trigger: CAAGCAATGAAAGCACGGCAAATTACTAACACCAGACCTCTGTCATATACAGGTGATATCATTAGTCTGAGCAATTTGCTGTTTGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561203.1
CDS-3UTR CAA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCCGTGCTTTCATTGCTaGCTGTTGTTTTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHPCFHC*LLFFQS
Trigger: GCTCTGGAAAAACAACAGCAAGCAATGAAAGCACGG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp GAAAAGCCATCATCTCAAGGTCAAGAGTTATCTGAATCACTGACATCGAGCAAACCTGAGTTACGTAGTTaGCGTTGTGTAATTAGAATC +
Preference number: 5 (lower is better)
Translates to: EKPSSQGQELSESLTSSKPELRS*RCVIRI
Trigger: GATTCTAATTACACAACGCAAACTACGTAACTCAGG...TTTGCTCGATGTCAGTGATTCAGATAACTCTTGACCTTGAGATGATGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAGCACTCAGGACAAGTTaGGATACTCAATCAAATCCA +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAALRTS*DTQSNP
Trigger: TGGATTTGATTGAGTATCCAAACTTGTCCTGAGTGC...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AAAGTTCCTTTCCTTGACCTCCTGACAGTAACTATGGTCATTGCTATGTGGAAGCATTTAGCTCATTTATaGTCTCCTAAGCAGGTATAC +
Preference number: 5 (lower is better)
Translates to: KVPFLDLLTVTMVIAMWKHLAHL*SPKQVY
Trigger: GTATACCTGCTTAGGAGACAATAAATGAGCTAAATG...CTTCCACATAGCAATGACCATAGTTACTGTCAGGAGGTCAAGGAAAGGAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAGCATTCACTACTCATTaGCACATTTCAATTCCCACC +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAAFTTH*HISIPT
Trigger: GGTGGGAATTGAAATGTGCAAATGAGTAGTGAATGC...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCCAGAAGCACAATTTTaGATCGACTATCAGGACCTG +
Preference number: 5 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHPEAQF*IDYQDL
Trigger: CAGGTCCTGATAGTCGATCAAAAATTGTGCTTCTGG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATATGGAGAGTTCTGACTaGCTGGAGAGAGTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHMESSD*LERVKY
Trigger: ATACTTCACTCTCTCCAGCAAGTCAGAACTCTCCAT...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATGAAACTGACAAGCTCTaGGAGAAGAAGAGTCACACA +
Preference number: 5 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHETDKL*EKKSHT
Trigger: TGTGTGACTCTTCTTCTCCAAGAGCTTGTCAGTTTC...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATCCTGCTCCTGTTCCATaGCTGCAACCATATCTTTAT +
Preference number: 5 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHPAPVP*LQPYLY
Trigger: ATAAAGATATGGTTGCAGCAATGGAACAGGAGCAGG...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCACCTGAGTTACGTAGTTaGCGTTGTGTAATTAGAATC +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAPELRS*RCVIRI
Trigger: GATTCTAATTACACAACGCAAACTACGTAACTCAGG...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTCTTGAAGTATCTCAATaGGGGGTGTGTCAAATGGAA +
Preference number: 5 (lower is better)
Translates to: SQMEIFILNSFVTILQPFLEVSQ*GVCQME
Trigger: TTCCATTTGACACACCCCCAATTGAGATACTTCAAG...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS-3UTR CAA 90 bp TCCCAGATGGAGATTTTTATTCTTAACTCCTTCGTGACGATTTTACAGCCTTTTTTTTCTGTCTTCTACTaGTGGGGAGTCATGAACTCT +
Preference number: 5 (lower is better)
Translates to: SQMEIFILNSFVTILQPFFSVFY*WGVMNS
Trigger: AGAGTTCATGACTCCCCACAAGTAGAAGACAGAAAA...AAAAGGCTGTAAAATCGTCACGAAGGAGTTAAGAATAAAAATCTCCATCTGGGA
39% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS TCA 90 bp CTTTTTGCACGTTTGGGAACTGAGGTGGTAATAGGAATTGGAGTCTaGACTATATTGATTGGTGAGTTTTCAGGTAAATCATCCAATACT +
Preference number: 5 (lower is better)
Translates to: LFARLGTEVVIGIGV*TILIGEFSGKSSNT
Trigger: AGTATTGGATGATTTACCTGAAAACTCACCAATCAATATAGTTCAGACTCCAATTCCTATTACCACCTCAGTTCCCAAACGTGCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000557940.1
ENST00000559471.6
CDS TCA 90 bp CTTTTTGCACGTTTGGGAACTGAGGTGGTAATAGGAATTGGAGTCTaGACTATATTGATTGGTGAGTTTTCAGGTAAATCATCCAACTAT +
Preference number: 5 (lower is better)
Translates to: LFARLGTEVVIGIGV*TILIGEFSGKSSNY
Trigger: ATAGTTGGATGATTTACCTGAAAACTCACCAATCAATATAGTTCAGACTCCAATTCCTATTACCACCTCAGTTCCCAAACGTGCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561203.1
CDS-3UTR CAA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTCTGGTGTTAGTAATTaGCCGTGCTTTCATTGCTTG +
Preference number: 5 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHSGVSN*PCFHCL
Trigger: CAAGCAATGAAAGCACGGCAAATTACTAACACCAGA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCACATTTAGCTCATTTATaGTCTCCTAAGCAGGTATAC +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAHLAHL*SPKQVY
Trigger: GTATACCTGCTTAGGAGACAATAAATGAGCTAAATG...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp AGAACACACCAGTATAAGACTCTGTTTCTGAAGAGTTTACATGTAAGTGCAGCAATAAAGACTCAGAATTaGGATCGCTTCTATGGGATT +
Preference number: 5 (lower is better)
Translates to: RTHQYKTLFLKSLHVSAAIKTQN*DRFYGI
Trigger: AATCCCATAGAAGCGATCCAAATTCTGAGTCTTTAT...TGCTGCACTTACATGTAAACTCTTCAGAAACAGAGTCTTATACTGGTGTGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559471.6
CDS-3UTR CAA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATTGTGGATTTTGGTTATaGTTGAAGATGCCATTGGAC +
Preference number: 5 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHCGFWL*LKMPLD
Trigger: GTCCAATGGCATCTTCAACAATAACCAAAATCCACA...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS-3UTR CAA 90 bp TCACAGCAAACAAACCTACTGAAGCAGAAATCTAACTTTGGAAGTGTAATTCATGACTCAATTCTACTATaGAGCTGCACTTCTACAGAT +
Preference number: 5 (lower is better)
Translates to: SQQTNLLKQKSNFGSVIHDSILL*SCTSTD
Trigger: ATCTGTAGAAGTGCAGCTCAATAGTAGAATTGAGTC...ATGAATTACACTTCCAAAGTTAGATTTCTGCTTCAGTAGGTTTGTTTGCTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS GCA 72 bp GACATTCTGCTCCGTGGGGGCTCGGTCCATGGTGCCTaGAGCCGCAACGGGCCCGCGCTAGTCGGTGTAAAC +
Preference number: 6 (lower is better)
Translates to: DILLRGGSVHGA*SRNGPALVGVN
Trigger: GTTTACACCGACTAGCGCGGGCCCGTTGCGGCTGCAGGCACCATGGACCGAGCCCCCACGGAGCAGAATGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000557923.1
ENST00000559424.1
ENST00000559471.6
CDS CCA 72 bp GCGAGCTGCAGTTGCTGGACTTCTGCTGCCCAGGACTaGCCTGCTGGTCAGCAGTCCATGCCTCACTGTCCA +
Preference number: 6 (lower is better)
Translates to: ASCSCWTSAAQD*PAGQQSMPHCP
Trigger: TGGACAGTGAGGCATGGACTGCTGACCAGCAGGCCAGTCCTGGGCAGCAGAAGTCCAGCAACTGCAGCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS TCA 72 bp ACTCTTCTTCTGGGGAATAAATGGCTCCACCTCAGCTaGCAGCTTGACATTCTGCTCCGTGGGGGCTCGGTC +
Preference number: 6 (lower is better)
Translates to: TLLLGNKWLHLS*QLDILLRGGSV
Trigger: GACCGAGCCCCCACGGAGCAGAATGTCAAGCTGTCAGCTGAGGTGGAGCCATTTATTCCCCAGAAGAAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000557923.1
ENST00000559424.1
ENST00000559471.6
CDS GCA 72 bp CGGCAACTGCCATCCAAAGAGCCAGTCTCTGTACTCTaGTGTGAGGCCCATTCCAGGTCATCTGGCTTCACT +
Preference number: 6 (lower is better)
Translates to: RQLPSKEPVSVL*CEAHSRSSGFT
Trigger: AGTGAAGCCAGATGACCTGGAATGGGCCTCACAGCAGAGTACAGAGACTGGCTCTTTGGATGGCAGTTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS CCA 72 bp CTAGCCCCCTGCTCACTAGAAGATTCAGCAGTAGGGTaGGATGCTCTTCTTCTCCTGCCCTTGGACTTCCAG +
Preference number: 6 (lower is better)
Translates to: LAPCSLEDSAVG*DALLLLPLDFQ
Trigger: CTGGAAGTCCAAGGGCAGGAGAAGAAGAGCATCCCACCCTACTGCTGAATCTTCTAGTGAGCAGGGGGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS TCA 72 bp CTTCGATGGCTGGACAATGGGAAGACCTGTCCAAGCTaGCTTGGACGCTCAGTGCATTCTGTGGTGATAGCA +
Preference number: 6 (lower is better)
Translates to: LRWLDNGKTCPS*LGRSVHSVVIA
Trigger: TGCTATCACCACAGAATGCACTGAGCGTCCAAGTCAGCTTGGACAGGTCTTCCCATTGTCCAGCCATCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559424.1
ENST00000559471.6
CDS GCA 72 bp CCACTATCACTGTCAATGTCGGCTTCACTAGCCCCCTaGTCACTAGAAGATTCAGCAGTAGGGTGGGATGCT +
Preference number: 6 (lower is better)
Translates to: PLSLSMSASLAP*SLEDSAVGWDA
Trigger: AGCATCCCACCCTACTGCTGAATCTTCTAGTGAGCAGGGGGCTAGTGAAGCCGACATTGACAGTGATAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS GCA 72 bp CATGGTCCCAGAATCAGGATTTCTCAAAGCCCCTGCTaGAGGCTGGTTGTTGCTGTGTTTGGGACTGCAGTA +
Preference number: 6 (lower is better)
Translates to: HGPRIRISQSPC*RLVVAVFGTAV
Trigger: TACTGCAGTCCCAAACACAGCAACAACCAGCCTGCAGCAGGGGCTTTGAGAAATCCTGATTCTGGGACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS CCA 72 bp TCAAAGCCCCTGCTGCAGGCTGGTTGTTGCTGTGTTTaGGACTGCAGTAACCACTATCACTGTCAATGTCGG +
Preference number: 6 (lower is better)
Translates to: SKPLLQAGCCCV*DCSNHYHCQCR
Trigger: CCGACATTGACAGTGATAGTGGTTACTGCAGTCCCAAACACAGCAACAACCAGCCTGCAGCAGGGGCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS GCA 72 bp CAGGATTTCTCAAAGCCCCTGCTGCAGGCTGGTTGTTaGTGTGTTTGGGACTGCAGTAACCACTATCACTGT +
Preference number: 6 (lower is better)
Translates to: QDFSKPLLQAGC*CVWDCSNHYHC
Trigger: ACAGTGATAGTGGTTACTGCAGTCCCAAACACAGCAACAACCAGCCTGCAGCAGGGGCTTTGAGAAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS GCA 72 bp ATTCATGGTCCCAGAATCAGGATTTCTCAAAGCCCCTaGTGCAGGCTGGTTGTTGCTGTGTTTGGGACTGCA +
Preference number: 6 (lower is better)
Translates to: IHGPRIRISQSP*CRLVVAVFGTA
Trigger: TGCAGTCCCAAACACAGCAACAACCAGCCTGCAGCAGGGGCTTTGAGAAATCCTGATTCTGGGACCATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS CCA 72 bp AGGCGGCTGAGCAGATATAATGGGATAGGCAAAGTATaGTCCAGTAGGGTTTGGATTGGGTTGTTGCCATCG +
Preference number: 6 (lower is better)
Translates to: RRLSRYNGIGKV*SSRVWIGLLPS
Trigger: CGATGGCAACAACCCAATCCAAACCCTACTGGACCATACTTTGCCTATCCCATTATATCTGCTCAGCCGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000559424.1
ENST00000559471.6
CDS CCA 72 bp ATGGCTGGACAATGGGAAGACCTGTCCAAGCTGACTTaGACGCTCAGTGCATTCTGTGGTGATAGCATTTAC +
Preference number: 6 (lower is better)
Translates to: MAGQWEDLSKLT*TLSAFCGDSIY
Trigger: GTAAATGCTATCACCACAGAATGCACTGAGCGTCCAAGTCAGCTTGGACAGGTCTTCCCATTGTCCAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559424.1
ENST00000559471.6
CDS CCA 72 bp GCACTTGCTGCAGAGGGATTCCGAGAATGTCCCATGTaGTGTGGTACCTTCTTCACATTCTTTAAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: ALAAEGFRECPM*CGTFFTFFKAS
Trigger: GGAAGCCTTAAAGAATGTGAAGAAGGTACCACACCACATGGGACATTCTCGGAATCCCTCTGCAGCAAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS TCA 72 bp CCTTGTGACACAGGTGTCATACAGTATGGAGAGTTCTaGCTTGCTGGAGAGAGTGAAGTATCACTGGGCATG +
Preference number: 6 (lower is better)
Translates to: PCDTGVIQYGEF*LAGESEVSLGM
Trigger: CATGCCCAGTGATACTTCACTCTCTCCAGCAAGTCAGAACTCTCCATACTGTATGACACCTGTGTCACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS TCA 72 bp TGGACTGCCTATTCCAGAACTAGCAGGAGAGCCTTGTaGCACAGGTGTCATACAGTATGGAGAGTTCTGACT +
Preference number: 6 (lower is better)
Translates to: WTAYSRTSRRAL*HRCHTVWRVLT
Trigger: AGTCAGAACTCTCCATACTGTATGACACCTGTGTCACAAGGCTCTCCTGCTAGTTCTGGAATAGGCAGTCCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS GCA 72 bp GTTGTTTTGGGACCACTGATCCTCTGTTACTGTTTCTaGTTCGATGGCTGGACAATGGGAAGACCTGTCCAA +
Preference number: 6 (lower is better)
Translates to: VVLGPLILCYCF*FDGWTMGRPVQ
Trigger: TTGGACAGGTCTTCCCATTGTCCAGCCATCGAAGCAGAAACAGTAACAGAGGATCAGTGGTCCCAAAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559424.1
ENST00000559471.6
CDS TCA 72 bp TCCAAGCTGAAGGGTTTCCATAGTTCTCTGGGTCTCTaGGACCCAAGACTCAATTCTACTATTGAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: SKLKGFHSSLGL*DPRLNSTIELH
Trigger: GTGCAGCTCAATAGTAGAATTGAGTCTTGGGTCTCAGAGACCCAGAGAACTATGGAAACCCTTCAGCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS GCA 72 bp GCTGAGGTAGTACTGCCTGTAGCCACTAATGATGGCTaGTTACCAATTGGGGGTGTGTCAAATGGAAGTTTA +
Preference number: 6 (lower is better)
Translates to: AEVVLPVATNDG*LPIGGVSNGSL
Trigger: TAAACTTCCATTTGACACACCCCCAATTGGTAAGCAGCCATCATTAGTGGCTACAGGCAGTACTACCTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS CCA 72 bp GAGAGTTCTGACTTGCTGGAGAGAGTGAAGTATCACTaGGCATGCTTAGTCCAGTATCTTCCTGGGAAACAA +
Preference number: 6 (lower is better)
Translates to: ESSDLLERVKYH*ACLVQYLPGKQ
Trigger: TTGTTTCCCAGGAAGATACTGGACTAAGCATGCCCAGTGATACTTCACTCTCTCCAGCAAGTCAGAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS CAA 90 bp ACCCATAACGAGTCGTCTCCTTGCTTTTGCTCTTACAGGATCTTTTaGGTAGATGCGTTCCTGGAAACTGACAAGCTCTTGGAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: THNESSPCFCSYRIF*VDAFLETDKLLEKK
Trigger: CTTCTTCTCCAAGAGCTTGTCAGTTTCCAGGAACGCATCTACCAAAAAGATCCTGTAAGAGCAAAAGCAAGGAGACGACTCGTTATGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559122.1
ENST00000559471.6
CDS CAA 90 bp TCCACAGCTGGAGATAGAGAGCCGACATTTCCTGAGTTACGTAGTTaGCGTTGTGTAATTAGAATCAGAGTGCTCTTTGTTGAGCGAGCT +
Preference number: 6 (lower is better)
Translates to: STAGDREPTFPELRS*RCVIRIRVLFVERA
Trigger: AGCTCGCTCAACAAAGAGCACTCTGATTCTAATTACACAACGCAAACTACGTAACTCAGGAAATGTCGGCTCTCTATCTCCAGCTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS TCA 72 bp TTGTCTTCCTCAGAACCATTAAGGGTTTTTCCAAGCTaGAGGGTTTCCATAGTTCTCTGGGTCTCTGAGACC +
Preference number: 6 (lower is better)
Translates to: LSSSEPLRVFPS*RVSIVLWVSET
Trigger: GGTCTCAGAGACCCAGAGAACTATGGAAACCCTTCAGCTTGGAAAAACCCTTAATGGTTCTGAGGAAGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS CCA 72 bp ATGAGAAGAGGAGAAAGGGGGAGCTCCTTACCTTCCTaGGAAACAATCTCCTGTGGCAAGTCATCAATAAAA +
Preference number: 6 (lower is better)
Translates to: MRRGERGSSLPS*ETISCGKSSIK
Trigger: TTTTATTGATGACTTGCCACAGGAGATTGTTTCCCAGGAAGGTAAGGAGCTCCCCCTTTCTCCTCTTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559198.1
CDS CAA 72 bp CATTCTTTAAGGCTTCCTCAGCCTGCTCCTGTTCCATaGCTGCAACCATATCTTTATATGCTTTCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: HSLRLPQPAPVP*LQPYLYMLSWP
Trigger: AGGCCAGGAAAGCATATAAAGATATGGTTGCAGCAATGGAACAGGAGCAGGCTGAGGAAGCCTTAAAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS CCA 72 bp GCTTACCAATTGGGGGTGTGTCAAATGGAAGTTTACTaGGTTTTTCAGAAGTGCTGTGCTTACAGGATACCT +
Preference number: 6 (lower is better)
Translates to: AYQLGVCQMEVY*VFQKCCAYRIP
Trigger: AGGTATCCTGTAAGCACAGCACTTCTGAAAAACCCAGTAAACTTCCATTTGACACACCCCCAATTGGTAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS CAA 72 bp TTCCAGAGCATTGTTGCAGTGGTCTCTGAGAGAGACTaGTTAGCGATATCTGATGGGAAATCAGTTTGCTGT +
Preference number: 6 (lower is better)
Translates to: FQSIVAVVSERD*LAISDGKSVCC
Trigger: ACAGCAAACTGATTTCCCATCAGATATCGCTAACAAGTCTCTCTCAGAGACCACTGCAACAATGCTCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS TCA 72 bp TCTGGGTCTCTGAGACCCAAGACTCAATTCTACTATTaGGCTGCACTTCTACAGATATGGGTTCATGAGTAT +
Preference number: 6 (lower is better)
Translates to: SGSLRPKTQFYY*AALLQIWVHEY
Trigger: ATACTCATGAACCCATATCTGTAGAAGTGCAGCTCAATAGTAGAATTGAGTCTTGGGTCTCAGAGACCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS GCA 72 bp GGTACCTTCTTCACATTCTTTAAGGCTTCCTCAGCCTaGTCCTGTTCCATTGCTGCAACCATATCTTTATAT +
Preference number: 6 (lower is better)
Translates to: GTFFTFFKASSA*SCSIAATISLY
Trigger: ATATAAAGATATGGTTGCAGCAATGGAACAGGAGCAGGCTGAGGAAGCCTTAAAGAATGTGAAGAAGGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS CCA 72 bp AGGATGATAGAAACCCATAACCTGGGCACATGGTGCTaGCATCAGCTGATAATATGTATACTCTGTAGAAAC +
Preference number: 6 (lower is better)
Translates to: RMIETHNLGTWC*HQLIICILCRN
Trigger: GTTTCTACAGAGTATACATATTATCAGCTGATGCCAGCACCATGTGCCCAGGTTATGGGTTTCTATCATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000559424.1
ENST00000559471.6
CDS CCA 72 bp GTATCTCAATTGGGGGTGTGTCAAATGGAAGTTTACTaGGTTTTTCAGAAGTGCTGTGCTTACAGGATACCT +
Preference number: 6 (lower is better)
Translates to: VSQLGVCQMEVY*VFQKCCAYRIP
Trigger: AGGTATCCTGTAAGCACAGCACTTCTGAAAAACCCAGTAAACTTCCATTTGACACACCCCCAATTGAGATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS GCA 72 bp ACCACTGTATATGACAGAGGTCTGGTGTTAGTAATTTaGCGTGCTTTCATTGCTTGCTGTTGTTTTTCCAGA +
Preference number: 6 (lower is better)
Translates to: TTVYDRGLVLVI*RAFIACCCFSR
Trigger: TCTGGAAAAACAACAGCAAGCAATGAAAGCACGGCAAATTACTAACACCAGACCTCTGTCATATACAGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS GCA 72 bp TCACCTGTATATGACAGAGGTCTGGTGTTAGTAATTTaGCGTGCTTTCATTGCTTGCTGTTGTTTTTCCAGA +
Preference number: 6 (lower is better)
Translates to: SPVYDRGLVLVI*RAFIACCCFSR
Trigger: TCTGGAAAAACAACAGCAAGCAATGAAAGCACGGCAAATTACTAACACCAGACCTCTGTCATATACAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561203.1
CDS CCA 72 bp GAACTCTTGAAGTATCTCAATTGGGGGTGTGTCAAATaGAAGTTTACTGGGTTTTTCAGAAGTGCTGTGCTT +
Preference number: 6 (lower is better)
Translates to: ELLKYLNWGCVK*KFTGFFRSAVL
Trigger: AAGCACAGCACTTCTGAAAAACCCAGTAAACTTCCATTTGACACACCCCCAATTGAGATACTTCAAGAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561428.1
CDS CAA 72 bp CAGTTTGCTGTGAAGCATCTACCAGAAGCACAATTTTaGATCGACTATCAGGACCTGCTGCATTTGTTTCTT +
Preference number: 6 (lower is better)
Translates to: QFAVKHLPEAQF*IDYQDLLHLFL
Trigger: AAGAAACAAATGCAGCAGGTCCTGATAGTCGATCAAAAATTGTGCTTCTGGTAGATGCTTCACAGCAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559471.6
CDS CAA 72 bp GGAGATAGAGAGCCGACATTTCCTGAGTTACGTAGTTaGCGTTGTGTAATTAGAATCAGAGTGCTCTTTGTT +
Preference number: 6 (lower is better)
Translates to: GDREPTFPELRS*RCVIRIRVLFV
Trigger: AACAAAGAGCACTCTGATTCTAATTACACAACGCAAACTACGTAACTCAGGAAATGTCGGCTCTCTATCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261847.7
ENST00000559471.6
CDS CAA 90 bp TATGGTCCAGTAGGGTTTGGATTGGGTTGTTGCCATCGTATATCATaGTTATATAAAGGAAACTGTCTATTGGACTGGTTTTCCTGCACA +
Preference number: 6 (lower is better)
Translates to: YGPVGFGLGCCHRIS*LYKGNCLLDWFSCT
Trigger: TGTGCAGGAAAACCAGTCCAATAGACAGTTTCCTTTATATAACAATGATATACGATGGCAACAACCCAATCCAAACCCTACTGGACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000559424.1
ENST00000559471.6
CDS CAA 90 bp TACAGGATCTTTTTGGTAGATGCGTTCCTGGAAACTGACAAGCTCTaGGAGAAGAAGAGTCACACATTCATCAATCTCTTTACAAAGAAC +
Preference number: 6 (lower is better)
Translates to: YRIFLVDAFLETDKL*EKKSHTFINLFTKN
Trigger: GTTCTTTGTAAAGAGATTGATGAATGTGTGACTCTTCTTCTCCAAGAGCTTGTCAGTTTCCAGGAACGCATCTACCAAAAAGATCCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559122.1
ENST00000559471.6
CDS TCA 72 bp CAGCAAATTGCTCAGACTAATGATATCACCTGTATATaGCAGAGGTCTGGTGTTAGTAATTTGCCGTGCTTT +
Preference number: 6 (lower is better)
Translates to: QQIAQTNDITCI*QRSGVSNLPCF
Trigger: AAAGCACGGCAAATTACTAACACCAGACCTCTGTCATATACAGGTGATATCATTAGTCTGAGCAATTTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561203.1
CDS GCA 72 bp ACAATCTCCTGTGGCAAGTCATCAATAAAATCTAAGTaGATTTCTGTTGGTTCCTCGGATCCCAAAAGATTG +
Preference number: 6 (lower is better)
Translates to: TISCGKSSIKSK*ISVGSSDPKRL
Trigger: CAATCTTTTGGGATCCGAGGAACCAACAGAAATGCACTTAGATTTTATTGATGACTTGCCACAGGAGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000559198.1
ENST00000559471.6
CDS TCA 72 bp CGTTTGGGAACTGAGGTGGTAATAGGAATTGGAGTCTaGACTATATTGATTGGTGAGTTTTCAGGTAAATCA +
Preference number: 6 (lower is better)
Translates to: RLGTEVVIGIGV*TILIGEFSGKS
Trigger: TGATTTACCTGAAAACTCACCAATCAATATAGTTCAGACTCCAATTCCTATTACCACCTCAGTTCCCAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261847.7
ENST00000380927.6
ENST00000557940.1
ENST00000559471.6
ENST00000561203.1
CDS GCA 72 bp GCAAAGTATGGTCCAGTAGGGTTTGGATTGGGTTGTTaGCATCGTATATCATTGTTATATAAAGGAAACTGT +
Preference number: 6 (lower is better)
Translates to: AKYGPVGFGLGC*HRISLLYKGNC
Trigger: ACAGTTTCCTTTATATAACAATGATATACGATGGCAACAACCCAATCCAAACCCTACTGGACCATACTTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000559424.1
ENST00000559471.6
CDS CAA 90 bp ACAAAGAACCTGATTACAATACTTATGCGTGAAAACATGCAGTGTTaGGTTTTCTGTTCCTGTGTTAGTTTGCTGAGAATCATGGTTTCC +
Preference number: 6 (lower is better)
Translates to: TKNLITILMRENMQC*VFCSCVSLLRIMVS
Trigger: GGAAACCATGATTCTCAGCAAACTAACACAGGAACAGAAAACCAAACACTGCATGTTTTCACGCATAAGTATTGTAATCAGGTTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559122.1
CDS CAA 72 bp GTAGGGTTTGGATTGGGTTGTTGCCATCGTATATCATaGTTATATAAAGGAAACTGTCTATTGGACTGGTTT +
Preference number: 6 (lower is better)
Translates to: VGFGLGCCHRIS*LYKGNCLLDWF
Trigger: AAACCAGTCCAATAGACAGTTTCCTTTATATAACAATGATATACGATGGCAACAACCCAATCCAAACCCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261847.7
ENST00000559424.1
ENST00000559471.6
CDS CAA 72 bp CTGATTACAATACTTATGCGTGAAAACATGCAGTGTTaGGTTTTCTGTTCCTGTGTTAGTTTGCTGAGAATC +
Preference number: 6 (lower is better)
Translates to: LITILMRENMQC*VFCSCVSLLRI
Trigger: GATTCTCAGCAAACTAACACAGGAACAGAAAACCAAACACTGCATGTTTTCACGCATAAGTATTGTAATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559122.1
CDS TCA 72 bp TATAAAGACTCAGAATTTGGATCGCTTCTATGGGATTaGCTAGAGCTTAAATGCTTATTATCTGGTCTCTTT +
Preference number: 6 (lower is better)
Translates to: YKDSEFGSLLWD*LELKCLLSGLF
Trigger: AAAGAGACCAGATAATAAGCATTTAAGCTCTAGTCAATCCCATAGAAGCGATCCAAATTCTGAGTCTTTATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380927.6
ENST00000557940.1
ENST00000559471.6