Pregenerated sensors for SEC61G-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000234707Ensembl transcript IDs: ENST00000439413.2, ENST00000655633.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAAGACCCTAATGGAGGCAGTGGTGGAAATTCCCATTCACGACGATaGCATGGAAGGAGGGAGGCCAGGACCCAGTCAGTAGCACGCAGA | + |
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Preference number: 5 (lower is better) Translates to: EDPNGGSGGNSHSRR*HGRREARTQSVARR Trigger: TCTGCGTGCTACTGACTGGGTCCTGGCCTCCCTCCTTCCATGGCATCGTCGTGAATGGGAATTTCCACCACTGCCTCCATTAGGGTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655633.1 |
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| CDS GCA 90 bp | CTTCTGACTAATGGAGGCAGTGGTGGAAATTCCCATTCACGACGATaGCATGGAAGGAGGGAGGCCAGGACCCAGTCAGTAGCACGCAGA | + |
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Preference number: 5 (lower is better) Translates to: LLTNGGSGGNSHSRR*HGRREARTQSVARR Trigger: TCTGCGTGCTACTGACTGGGTCCTGGCCTCCCTCCTTCCATGGCATCGTCGTGAATGGGAATTTCCACCACTGCCTCCATTAGTCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439413.2 |
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| CDS TCA 90 bp | GGCCCAGGGAAGAAGTGCTCTGTGATCACAGATAGTCCATCGCGGTaGGAGACCCACCTCGCAGTGAGGAAAACAGTGCGTTTTATAGGA | + |
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Preference number: 5 (lower is better) Translates to: GPGKKCSVITDSPSR*ETHLAVRKTVRFIG Trigger: TCCTATAAAACGCACTGTTTTCCTCACTGCGAGGTGGGTCTCTCACCGCGATGGACTATCTGTGATCACAGAGCACTTCTTCCCTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439413.2 |
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| CDS CCA 90 bp | ACTTTAGTATACGTCCCCAGGAACGTGTTTACACTGAGAAGCATGTaGTATGATGAAGGTCACTTGGCAGTTTGGCCCTTTCTTCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: TLVYVPRNVFTLRSM*YDEGHLAVWPFLLF Trigger: AAAGAGAAGAAAGGGCCAAACTGCCAAGTGACCTTCATCATACCACATGCTTCTCAGTGTAAACACGTTCCTGGGGACGTATACTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655633.1 |
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| CDS TCA 90 bp | AGCCAAGGTTTAAAACCCCAGTCTGAGGAATGCATACATACTCTCTaGCAGTGGAATGAAGGAAAGGTATACCATTCTGACTTTAGTATA | + |
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Preference number: 5 (lower is better) Translates to: SQGLKPQSEECIHTL*QWNEGKVYHSDFSI Trigger: TATACTAAAGTCAGAATGGTATACCTTTCCTTCATTCCACTGTCAGAGAGTATGTATGCATTCCTCAGACTGGGGTTTTAAACCTTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655633.1 |
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| CDS CAA 72 bp | AAGGCCGCTGGGGCTCGTGCTGTGGACGTGAGTGGGTaGAGGTCGGGCTGGTGGGGTAACCCGGGATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: KAAGARAVDVSG*RSGWWGNPGSS Trigger: GCTGGATCCCGGGTTACCCCACCAGCCCGACCTCAACCCACTCACGTCCACAGCACGAGCCCCAGCGGCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655633.1 |
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| CDS CAA 72 bp | CAGATGTGGCACAAGTCTCCCCATGCGGCTTCACTGTaGACTCTCAGGACATCTACCCTGGGGACTTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: QMWHKSPHAASL*TLRTSTLGTSR Trigger: GCGGGAAGTCCCCAGGGTAGATGTCCTGAGAGTCAACAGTGAAGCCGCATGGGGAGACTTGTGCCACATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655633.1 |
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| CDS CAA 90 bp | GACTGGAAGCAGATGTGGCACAAGTCTCCCCATGCGGCTTCACTGTaGACTCTCAGGACATCTACCCTGGGGACTTCCCGCACCAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: DWKQMWHKSPHAASL*TLRTSTLGTSRTKK Trigger: CTTCTTGGTGCGGGAAGTCCCCAGGGTAGATGTCCTGAGAGTCAACAGTGAAGCCGCATGGGGAGACTTGTGCCACATCTGCTTCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655633.1 |
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| CDS GCA 72 bp | AATGGAGGCAGTGGTGGAAATTCCCATTCACGACGATaGCATGGAAGGAGGGAGGCCAGGACCCAGTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: NGGSGGNSHSRR*HGRREARTQSV Trigger: TACTGACTGGGTCCTGGCCTCCCTCCTTCCATGGCATCGTCGTGAATGGGAATTTCCACCACTGCCTCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000439413.2 ENST00000655633.1 |
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| CDS CAA 90 bp | TGTGGTATGATGAAGGTCACTTGGCAGTTTGGCCCTTTCTTCTCTTaGGCAGTGGGAGGCCATGAGAGCCGGAATTCTCACGAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: CGMMKVTWQFGPFFS*AVGGHESRNSHEQQ Trigger: CTGCTGCTCGTGAGAATTCCGGCTCTCATGGCCTCCCACTGCCAAAGAGAAGAAAGGGCCAAACTGCCAAGTGACCTTCATCATACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655633.1 |
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| CDS TCA 72 bp | AAGAAGTGCTCTGTGATCACAGATAGTCCATCGCGGTaGGAGACCCACCTCGCAGTGAGGAAAACAGTGCGT | + |
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Preference number: 6 (lower is better) Translates to: KKCSVITDSPSR*ETHLAVRKTVR Trigger: ACGCACTGTTTTCCTCACTGCGAGGTGGGTCTCTCACCGCGATGGACTATCTGTGATCACAGAGCACTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439413.2 |
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| CDS CCA 72 bp | TACGTCCCCAGGAACGTGTTTACACTGAGAAGCATGTaGTATGATGAAGGTCACTTGGCAGTTTGGCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: YVPRNVFTLRSM*YDEGHLAVWPF Trigger: AAAGGGCCAAACTGCCAAGTGACCTTCATCATACCACATGCTTCTCAGTGTAAACACGTTCCTGGGGACGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655633.1 |
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| CDS CAA 72 bp | TTTACACTGAGAAGCATGTGGTATGATGAAGGTCACTaGGCAGTTTGGCCCTTTCTTCTCTTTGGCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: FTLRSMWYDEGH*AVWPFLLFGSG Trigger: CCCACTGCCAAAGAGAAGAAAGGGCCAAACTGCCAAGTGACCTTCATCATACCACATGCTTCTCAGTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655633.1 |
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| CDS TCA 72 bp | CTTCAGTGGATCTTTCAGCAAGTGCATACACAAGGATaGCGGGCTTTCTACAGTTACAACATGTTCAATCTT | + |
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Preference number: 6 (lower is better) Translates to: LQWIFQQVHTQG*RAFYSYNMFNL Trigger: AAGATTGAACATGTTGTAACTGTAGAAAGCCCGTCATCCTTGTGTATGCACTTGCTGAAAGATCCACTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439413.2 |
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| CDS TCA 72 bp | TTAAAACCCCAGTCTGAGGAATGCATACATACTCTCTaGCAGTGGAATGAAGGAAAGGTATACCATTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LKPQSEECIHTL*QWNEGKVYHSD Trigger: GTCAGAATGGTATACCTTTCCTTCATTCCACTGTCAGAGAGTATGTATGCATTCCTCAGACTGGGGTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655633.1 |
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