RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC61A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000058262

Ensembl transcript IDs: ENST00000243253.8, ENST00000424880.2, ENST00000464451.5, ENST00000483956.1, ENST00000491668.1, ENST00000498837.1

Found 406 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTGCCGTGTaGCCACTGTCAGAGTGGGGTCTCCCCGACAGGCTGCACGCACCC +
Preference number: 1 (lower is better)
Translates to: SAGLWRWPCALQAAV*PLSEWGLPDRLHAP
Trigger: GGGTGCGTGCAGCCTGTCGGGGAGACCCCACTCTGACAGTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR TCA 90 bp GGGGTCAGCCCCCACCCACCCACCGTGACCATCACCCACAGGGCGTaGGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCAG +
Preference number: 1 (lower is better)
Translates to: GVSPHPPTVTITHRA*VWALQGPADGYRLQ
Trigger: CTGCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGGTGATGGTCACGGTGGGTGGGTGGGGGCTGACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 90 bp TGCCTTCCAGCCCCCTGCCCACCAGCTTGGGTACAGCTGCCTGCCTaGCAGAGGCCAAGCATTCCTAAGCGTGGGCTGGGGGAGGCCCTG +
Preference number: 1 (lower is better)
Translates to: CLPAPCPPAWVQLPA*QRPSIPKRGLGEAL
Trigger: CAGGGCCTCCCCCAGCCCACGCTTAGGAATGCTTGGCCTCTGGCAGGCAGGCAGCTGTACCCAAGCTGGTGGGCAGGGGGCTGGAAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 90 bp GGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTaGAGGCGGGACTATGGGGCTCCTCCTGAGGCCTGGTGCCTTCCA +
Preference number: 1 (lower is better)
Translates to: GRECGPCRAQPMVTG*RRDYGAPPEAWCLP
Trigger: TGGAAGGCACCAGGCCTCAGGAGGAGCCCCATAGTCCCGCCTGCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CCA 90 bp AGCACTGCCAGCAAGGTCTCCAGAGTGTGCCCCTCTGCCGGGCTGTaGCGGTGGCCCTGTGCTTTGCAGGCTGCCGTGTGCCCACTGTCA +
Preference number: 1 (lower is better)
Translates to: STASKVSRVCPSAGL*RWPCALQAAVCPLS
Trigger: TGACAGTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGACCTTGCTGGCAGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CCA 90 bp CATCACCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATaGTTACAGGCTGCAGGCGGGACTATGGGGCTCCTCCTGAGGCCT +
Preference number: 1 (lower is better)
Translates to: HHPQGVSVGLAGPSR*LQAAGGTMGLLLRP
Trigger: AGGCCTCAGGAGGAGCCCCATAGTCCCGCCTGCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGGTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 90 bp CCTGCCAGAGGCCAAGCATTCCTAAGCGTGGGCTGGGGGAGGCCCTaGCCCTCTGTAGCAGCAGAGCAGACAGGGCAGTGGGAGAACCAT +
Preference number: 1 (lower is better)
Translates to: PARGQAFLSVGWGRP*PSVAAEQTGQWENH
Trigger: ATGGTTCTCCCACTGCCCTGTCTGCTCTGCTGCTACAGAGGGGCAGGGCCTCCCCCAGCCCACGCTTAGGAATGCTTGGCCTCTGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 90 bp TCACTCTGTTTCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGTGTaGCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCT +
Preference number: 1 (lower is better)
Translates to: SLCFLASTASKVSRV*PSAGLWRWPCALQA
Trigger: AGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGACCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 90 bp GCCAGCTCGAAACCTCGAGCTCCTCAGGATCTTAGCACCCAACTCTaGTGCCCTTGCTGCTGGGCAGTGCCTGTCCTAAGAGGGGACTCC +
Preference number: 1 (lower is better)
Translates to: ASSKPRAPQDLSTQL*CPCCWAVPVLRGDS
Trigger: GGAGTCCCCTCTTAGGACAGGCACTGCCCAGCAGCAAGGGCAGCAGAGTTGGGTGCTAAGATCCTGAGGAGCTCGAGGTTTCGAGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 90 bp CCTCGAGCTCCTCAGGATCTTAGCACCCAACTCTGCTGCCCTTGCTaGTGGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCCAGA +
Preference number: 1 (lower is better)
Translates to: PRAPQDLSTQLCCPC*WAVPVLRGDSLKAR
Trigger: TCTGGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAGCAGCAAGGGCAGCAGAGTTGGGTGCTAAGATCCTGAGGAGCTCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CCA 90 bp CGAGCTCCTCAGGATCTTAGCACCCAACTCTGCTGCCCTTGCTGCTaGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCCAGAGAG +
Preference number: 1 (lower is better)
Translates to: RAPQDLSTQLCCPCC*AVPVLRGDSLKARE
Trigger: CTCTCTGGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAGCAGCAAGGGCAGCAGAGTTGGGTGCTAAGATCCTGAGGAGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 90 bp AAACCTCGAGCTCCTCAGGATCTTAGCACCCAACTCTGCTGCCCTTaGTGCTGGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCC +
Preference number: 1 (lower is better)
Translates to: KPRAPQDLSTQLCCP*CWAVPVLRGDSLKA
Trigger: GGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAGCAGCAAGGGCAGCAGAGTTGGGTGCTAAGATCCTGAGGAGCTCGAGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 90 bp GCCATATGGAGGAGCCTGGGGCCCATCTTGGTTCTGCTGCTGAGTTaGTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTGGTCACTC +
Preference number: 1 (lower is better)
Translates to: AIWRSLGPILVLLLS*WVALGKSLLVPWSL
Trigger: GAGTGACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATGGGCCCCAGGCTCCTCCATATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CCA 90 bp CTCCCCTTGCTAGGGCAGCTGCGAGGAGACGTGTCCAGTGATGACTaGCAGAATCTGGACAAACGGACATCACTGCAAGGGTCTGTCCAC +
Preference number: 1 (lower is better)
Translates to: LPLLGQLRGDVSSDD*QNLDKRTSLQGSVH
Trigger: GTGGACAGACCCTTGCAGTGATGTCCGTTTGTCCAGATTCTGCCAGTCATCACTGGACACGTCTCCTCGCAGCTGCCCTAGCAAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 90 bp AGCCCATGCACCCCGAACCTGACTTCACTACCAACCTTGAGCCTGTaGTGTCCTCTCTCTGCTGACGACACTGGTGACGCAGAAAGGAAG +
Preference number: 1 (lower is better)
Translates to: SPCTPNLTSLPTLSL*CPLSADDTGDAERK
Trigger: CTTCCTTTCTGCGTCACCAGTGTCGTCAGCAGAGAGAGGACAGCACAGGCTCAAGGTTGGTAGTGAAGTCAGGTTCGGGGTGCATGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CCA 90 bp CTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTaGTCACTCTGTTTCCTGGCTAGCACTGCCAGCAAGGTCTCCAGA +
Preference number: 1 (lower is better)
Translates to: LLSCWVALGKSLLVP*SLCFLASTASKVSR
Trigger: TCTGGAGACCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CCA 90 bp ATATGGAGGAGCCTGGGGCCCATCTTGGTTCTGCTGCTGAGTTGCTaGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTGGTCACTCTGT +
Preference number: 1 (lower is better)
Translates to: IWRSLGPILVLLLSC*VALGKSLLVPWSLC
Trigger: ACAGAGTGACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATGGGCCCCAGGCTCCTCCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 90 bp CTTATTTCAAACACTGGAGCAACTGATCAACACCACCACAGCCCATaGACCCCGAACCTGACTTCACTACCAACCTTGAGCCTGTGCTGT +
Preference number: 1 (lower is better)
Translates to: LISNTGATDQHHHSP*TPNLTSLPTLSLCC
Trigger: ACAGCACAGGCTCAAGGTTGGTAGTGAAGTCAGGTTCGGGGTGCATGGGCTGTGGTGGTGTTGATCAGTTGCTCCAGTGTTTGAAATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR TCA 90 bp TCCAGACATAAACATGAGTCTTCTTATTTCAAACACTGGAGCAACTaGTCAACACCACCACAGCCCATGCACCCCGAACCTGACTTCACT +
Preference number: 1 (lower is better)
Translates to: SRHKHESSYFKHWSN*STPPQPMHPEPDFT
Trigger: AGTGAAGTCAGGTTCGGGGTGCATGGGCTGTGGTGGTGTTGATCAGTTGCTCCAGTGTTTGAAATAAGAAGACTCATGTTTATGTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR TCA 90 bp GGGAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAAAATaGAACGTAGACATTTCAGTGTTTGTGCTTCCAACCAGAGTGAGA +
Preference number: 1 (lower is better)
Translates to: GKYMICSQLHTLLPK*NVDISVFVLPTRVR
Trigger: TCTCACTCTGGTTGGAAGCACAAACACTGAAATGTCTACGTTTCATTTTGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR GCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCAGCACCCAACTCTGCTaGCCTTGCTGCTGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCSTQLC*PCCWAV
Trigger: CACTGCCCAGCAGCAAGGGCAGCAGAGTTGGGTGCT...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCCTTCCGAGGCGCTTCTaGAGCAGCTTCCTCAACCTG +
Preference number: 2 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCLPRRF*SSFLNL
Trigger: CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAG...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR GCA 90 bp TCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGTGTGCCCCTCTGCCGGGCTGTCTCTGCTGCCCTTGCTaGTGGGCAGTGCCTGTCCTA +
Preference number: 2 (lower is better)
Translates to: SWLALPARSPECAPLPGCLCCPC*WAVPVL
Trigger: TAGGACAGGCACTGCCCAGCAGCAAGGGCAGCAGAG...ACAGCCCGGCAGAGGGGCACACTCTGGAGACCTTGCTGGCAGTGCTAGCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCAGTGGGAGAACCATGTaGGTAGGAGGGCATCAGGTC +
Preference number: 2 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCSGRTM*VGGHQV
Trigger: GACCTGATGCCCTCCTACCCACATGGTTCTCCCACT...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR TCA 90 bp TCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTCTTCACTACCAACCTTaGGCCTGTGCTGTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: SRVCPSAGLWRWPCALQALHYQP*ACAVLS
Trigger: AGAGAGGACAGCACAGGCTCAAGGTTGGTAGTGAAG...AGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR GCA 90 bp TCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGTGTGCCCCTCTGCCGGGCTGTCTGTGCTTTGCAGGCTaGCGTGTGCCCACTGTCAGA +
Preference number: 2 (lower is better)
Translates to: SWLALPARSPECAPLPGCLCFAG*RVPTVR
Trigger: TCTGACAGTGGGCACACGGCAGCCTGCAAAGCACAG...ACAGCCCGGCAGAGGGGCACACTCTGGAGACCTTGCTGGCAGTGCTAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR GCA 90 bp TGCTCAGGACTGGGTCTAGACAAGGCCACGTGTGATAGGGTGGTAAGCCCTGGGGTGGCGGTGGCCCTGTaGTTTGCAGGCTGCCGTGTG +
Preference number: 2 (lower is better)
Translates to: CSGLGLDKATCDRVVSPGVAVAL*FAGCRV
Trigger: CACACGGCAGCCTGCAAAGCACAGGGCCACCGCCAC...CCCAGGGCTTACCACCCTATCACACGTGGCCTTGTCTAGACCCAGTCCTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CCA 90 bp TCTCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGGCCAGGAGTGTCTTCTaGGAAAGCCATCCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: SPECAPLPGCGGGPVLCRARSVF*ESHPSL
Trigger: AAGAGAGGGATGGCTTTCCCAGAAGACACTCCTGGC...CCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CCA 90 bp TCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGTGTGCCCCTCTGCCGGGCTGTTCTGTCCACCTAGCTTaGCCAGGCTCAGCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: SWLALPARSPECAPLPGCSVHLA*PGSAWQ
Trigger: CTGCCAAGCTGAGCCTGGCCAAGCTAGGTGGACAGA...ACAGCCCGGCAGAGGGGCACACTCTGGAGACCTTGCTGGCAGTGCTAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR TCA 90 bp TCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGTGTGCCCCTCTGCCGGGCTGTCTGAACACAGCTGGGTaGTCTTCAGCCCAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: SWLALPARSPECAPLPGCLNTAG*SSAQKV
Trigger: CACCTTCTGGGCTGAAGATCACCCAGCTGTGTTCAG...ACAGCCCGGCAGAGGGGCACACTCTGGAGACCTTGCTGGCAGTGCTAGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR GCA 90 bp CCGATGGTTACAGGCTGCAGGCGGGACTATGGGGCTCCTCCTGAGGCCTGGTGCGTTCTGCTGCTGAGTTaGTGGGTGGCTTTAGGCAAG +
Preference number: 2 (lower is better)
Translates to: PMVTGCRRDYGAPPEAWCVLLLS*WVALGK
Trigger: CTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAAC...GCACCAGGCCTCAGGAGGAGCCCCATAGTCCCGCCTGCAGCCTGTAACCATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CCA 90 bp TGCTCAGGACTGGGTCTAGACAAGGCCACGTGTGATAGGGTGGTAAGCCCTGGGTGCCCACTGTCAGAGTaGGGTCTCCCCGACAGGCTG +
Preference number: 2 (lower is better)
Translates to: CSGLGLDKATCDRVVSPGCPLSE*GLPDRL
Trigger: CAGCCTGTCGGGGAGACCCCACTCTGACAGTGGGCA...CCCAGGGCTTACCACCCTATCACACGTGGCCTTGTCTAGACCCAGTCCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CAA 90 bp CACCACCACAGCCCATGCACCCCGAACCTGACTTCACTACCAACCTaGAGCCTGTGCTGTCCTCTCTCTGCTGACGACACTGGTGACGCA +
Preference number: 2 (lower is better)
Translates to: HHHSPCTPNLTSLPT*SLCCPLSADDTGDA
Trigger: TGCGTCACCAGTGTCGTCAGCAGAGAGAGGACAGCACAGGCTCAAGGTTGGTAGTGAAGTCAGGTTCGGGGTGCATGGGCTGTGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR TCA 90 bp TACAGCTGCCTGCCTGCCAGAGGCCAAGCATTCCTAAGCGTGGGCTGGGGGAGGTCTCCGGGAAATACATaGTCTGCTCCCAGCTTCACA +
Preference number: 2 (lower is better)
Translates to: YSCLPARGQAFLSVGWGRSPGNT*SAPSFT
Trigger: TGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGA...CCTCCCCCAGCCCACGCTTAGGAATGCTTGGCCTCTGGCAGGCAGGCAGCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR GCA 90 bp TGCTCAGGACTGGGTCTAGACAAGGCCACGTGTGATAGGGTGGTAAGCCCTGGGCACCACCACAGCCCATaGACCCCGAACCTGACTTCA +
Preference number: 2 (lower is better)
Translates to: CSGLGLDKATCDRVVSPGHHHSP*TPNLTS
Trigger: TGAAGTCAGGTTCGGGGTGCATGGGCTGTGGTGGTG...CCCAGGGCTTACCACCCTATCACACGTGGCCTTGTCTAGACCCAGTCCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CCA 90 bp TCTCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGAATTCTGAACACAGCTaGGTGATCTTCAGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: SPECAPLPGCGGGPVLCRNSEHS*VIFSPE
Trigger: TTCTGGGCTGAAGATCACCCAGCTGTGTTCAGAATT...CCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CCA 90 bp TCTCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCCTGCAAAACATCCTTaGTCCCACCAATGTCTAAAG +
Preference number: 2 (lower is better)
Translates to: SPECAPLPGCGGGPVLCRPAKHP*SHQCLK
Trigger: CTTTAGACATTGGTGGGACCAAGGATGTTTTGCAGG...CCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CAA 90 bp GGCCATATGGAGGAGCCTGGGGCCCATCTTGGTTCTGCTGCTGAGTaGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTGGTCACT +
Preference number: 2 (lower is better)
Translates to: GHMEEPGAHLGSAAE*LGGFRQVPSCPLVT
Trigger: AGTGACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATGGGCCCCAGGCTCCTCCATATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR GCA 90 bp TGCTCAGGACTGGGTCTAGACAAGGCCACGTGTGATAGGGTGGTAAGCCCTGGGCCAACCTTGAGCCTGTaGTGTCCTCTCTCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: CSGLGLDKATCDRVVSPGPTLSL*CPLSAD
Trigger: GTCAGCAGAGAGAGGACAGCACAGGCTCAAGGTTGG...CCCAGGGCTTACCACCCTATCACACGTGGCCTTGTCTAGACCCAGTCCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CCA 90 bp TCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTAGTTACATGGACACTTaGGGACAATCCTATACCATT +
Preference number: 2 (lower is better)
Translates to: SRVCPSAGLWRWPCALQASYMDT*GQSYTI
Trigger: AATGGTATAGGATTGTCCCCAAGTGTCCATGTAACT...AGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR GCA 90 bp TCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTGGTCCCAACCTTGAGCCTGTaGTGTCCTCTCTCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: SAAELLGGFRQVPSCPLVPTLSL*CPLSAD
Trigger: GTCAGCAGAGAGAGGACAGCACAGGCTCAAGGTTGG...GACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR TCA 90 bp AGCCCATGCACCCCGAACCTGACTTCACTACCAACCTTGAGCCTGTGCTGTCCTTGCTTCCAACCAGAGTaGGAAATTCCCTTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: SPCTPNLTSLPTLSLCCPCFQPE*EIPFVG
Trigger: CCCCACAAAGGGAATTTCTCACTCTGGTTGGAAGCA...AGGACAGCACAGGCTCAAGGTTGGTAGTGAAGTCAGGTTCGGGGTGCATGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR TCA 90 bp CTTGTCCCTTGGTCACTCTGTTTCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAAAACACTGGAGCAACTaGTCAACACCACCACAGCCC +
Preference number: 2 (lower is better)
Translates to: LVPWSLCFLASTASKVSRKHWSN*STPPQP
Trigger: GGGCTGTGGTGGTGTTGATCAGTTGCTCCAGTGTTT...TCTGGAGACCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACCAAGGGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CCA 90 bp CATCTTGGTTCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCTTCCGAGGCGCTTCTaGAGCAGCTTCCTCAACCTG +
Preference number: 2 (lower is better)
Translates to: HLGSAAELLGGFRQVPSCLPRRF*SSFLNL
Trigger: CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAG...ACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR TCA 90 bp TCCTTGGTCCCACCAATGTCTAAAGCCAGCTCGAAACCTCGAGCTCCTCAGGATCTTCACTACCAACCTTaGGCCTGTGCTGTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: SLVPPMSKASSKPRAPQDLHYQP*ACAVLS
Trigger: AGAGAGGACAGCACAGGCTCAAGGTTGGTAGTGAAG...ATCCTGAGGAGCTCGAGGTTTCGAGCTGGCTTTAGACATTGGTGGGACCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CCA 90 bp TCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTGGTCGTGTCCAGTGATGACTaGCAGAATCTGGACAAACGG +
Preference number: 2 (lower is better)
Translates to: SAAELLGGFRQVPSCPLVVSSDD*QNLDKR
Trigger: CCGTTTGTCCAGATTCTGCCAGTCATCACTGGACAC...GACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CAA 90 bp CTGGCTTTATTTGTCACTTATTCACCTTATCTCAGTTATGCCATTTaGGCGTCCACAGTGACAGTCCCCTGGAAGCTGGGGTCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: LALFVTYSPYLSYAI*ASTVTVPWKLGSAP
Trigger: GGGGGCTGACCCCAGCTTCCAGGGGACTGTCACTGTGGACGCCAAAATGGCATAACTGAGATAAGGTGAATAAGTGACAAATAAAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR TCA 90 bp TCCTTGGTCCCACCAATGTCTAAAGCCAGCTCGAAACCTCGAGCTCCTCAGGATAGCCGCATACAGCACTaGGAAGGTGCAAAGGTTAAA +
Preference number: 2 (lower is better)
Translates to: SLVPPMSKASSKPRAPQDSRIQH*EGAKVK
Trigger: TTTAACCTTTGCACCTTCTCAGTGCTGTATGCGGCT...ATCCTGAGGAGCTCGAGGTTTCGAGCTGGCTTTAGACATTGGTGGGACCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CCA 90 bp CTTGTCCCTTGGTCACTCTGTTTCCTGGCTAGCACTGCCAGCAAGGTCTCCAGACCTGCAAAACATCCTTaGTCCCACCAATGTCTAAAG +
Preference number: 2 (lower is better)
Translates to: LVPWSLCFLASTASKVSRPAKHP*SHQCLK
Trigger: CTTTAGACATTGGTGGGACCAAGGATGTTTTGCAGG...TCTGGAGACCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACCAAGGGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR TCA 90 bp CTTGTCCCTTGGTCACTCTGTTTCCTGGCTAGCACTGCCAGCAAGGTCTCCAGATCTCTGGCAGTCGGCTaGATAAAATTTCACTTTCAC +
Preference number: 2 (lower is better)
Translates to: LVPWSLCFLASTASKVSRSLAVG*IKFHFH
Trigger: GTGAAAGTGAAATTTTATTCAGCCGACTGCCAGAGA...TCTGGAGACCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACCAAGGGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR GCA 90 bp TGGCAGAATCTGGACAAACGGACATCACTGCAAGGGTCTGTCCACCTAGCTTGGTTTCACAGTTCTTTTTaGCAGTGCCAGGATAAAAAG +
Preference number: 2 (lower is better)
Translates to: WQNLDKRTSLQGSVHLAWFHSSF*QCQDKK
Trigger: CTTTTTATCCTGGCACTGGCAAAAAGAACTGTGAAA...CCAAGCTAGGTGGACAGACCCTTGCAGTGATGTCCGTTTGTCCAGATTCTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CCA 90 bp CATCTTGGTTCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTAGTTACATGGACACTTaGGGACAATCCTATACCATT +
Preference number: 2 (lower is better)
Translates to: HLGSAAELLGGFRQVPSCSYMDT*GQSYTI
Trigger: AATGGTATAGGATTGTCCCCAAGTGTCCATGTAACT...ACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR TCA 90 bp GAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAAAATGAAACGTAGAAGCCGCATACAGCACTaGGAAGGTGCAAAGGTTAAA +
Preference number: 2 (lower is better)
Translates to: EIHDLLPASHPTAKMKRRSRIQH*EGAKVK
Trigger: TTTAACCTTTGCACCTTCTCAGTGCTGTATGCGGCT...TCTACGTTTCATTTTGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CCA 72 bp GTCTCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTaGCCCTGTGCTTTGCAGGCTGCCGTGTGCCCACTG +
Preference number: 3 (lower is better)
Translates to: VSRVCPSAGLWR*PCALQAAVCPL
Trigger: CAGTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR TCA 72 bp CCCCACCCACCCACCGTGACCATCACCCACAGGGCGTaGGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTAC +
Preference number: 3 (lower is better)
Translates to: PHPPTVTITHRA*VWALQGPADGY
Trigger: GTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGGTGATGGTCACGGTGGGTGGGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 72 bp CTGTGGCGGTGGCCCTGTGCTTTGCAGGCTGCCGTGTaGCCACTGTCAGAGTGGGGTCTCCCCGACAGGCTG +
Preference number: 3 (lower is better)
Translates to: LWRWPCALQAAV*PLSEWGLPDRL
Trigger: CAGCCTGTCGGGGAGACCCCACTCTGACAGTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCGCCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 72 bp GCCCCCTGCCCACCAGCTTGGGTACAGCTGCCTGCCTaGCAGAGGCCAAGCATTCCTAAGCGTGGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: APCPPAWVQLPA*QRPSIPKRGLG
Trigger: CCCCAGCCCACGCTTAGGAATGCTTGGCCTCTGGCAGGCAGGCAGCTGTACCCAAGCTGGTGGGCAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 72 bp TGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTaGAGGCGGGACTATGGGGCTCCTCCTGAGGCCTGG +
Preference number: 3 (lower is better)
Translates to: CGPCRAQPMVTG*RRDYGAPPEAW
Trigger: CCAGGCCTCAGGAGGAGCCCCATAGTCCCGCCTGCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CCA 72 bp AGCAAGGTCTCCAGAGTGTGCCCCTCTGCCGGGCTGTaGCGGTGGCCCTGTGCTTTGCAGGCTGCCGTGTGC +
Preference number: 3 (lower is better)
Translates to: SKVSRVCPSAGL*RWPCALQAAVC
Trigger: GCACACGGCAGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGACCTTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CCA 72 bp CAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATaGTTACAGGCTGCAGGCGGGACTATGGGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: QGVSVGLAGPSR*LQAAGGTMGLL
Trigger: GAGGAGCCCCATAGTCCCGCCTGCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 72 bp TTCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGTGTaGCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCT +
Preference number: 3 (lower is better)
Translates to: FLASTASKVSRV*PSAGLWRWPCA
Trigger: AGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGACCTTGCTGGCAGTGCTAGCCAGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 72 bp GGCCAAGCATTCCTAAGCGTGGGCTGGGGGAGGCCCTaGCCCTCTGTAGCAGCAGAGCAGACAGGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: GQAFLSVGWGRP*PSVAAEQTGQW
Trigger: CCACTGCCCTGTCTGCTCTGCTGCTACAGAGGGGCAGGGCCTCCCCCAGCCCACGCTTAGGAATGCTTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CAA 90 bp CCGATGGTTACAGGCTGCAGGCGGGACTATGGGGCTCCTCCTGAGGCCTGGTGCCCAACTCTGCTGCCCTaGCTGCTGGGCAGTGCCTGT +
Preference number: 3 (lower is better)
Translates to: PMVTGCRRDYGAPPEAWCPTLLP*LLGSAC
Trigger: ACAGGCACTGCCCAGCAGCAAGGGCAGCAGAGTTGG...GCACCAGGCCTCAGGAGGAGCCCCATAGTCCCGCCTGCAGCCTGTAACCATCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CAA 90 bp TCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTGCCGTGTGCCCACTGGTGGTGTCTGCTCACTaGCGTGCAGTCCTAAGCACA +
Preference number: 3 (lower is better)
Translates to: SAGLWRWPCALQAAVCPLVVSAH*RAVLST
Trigger: TGTGCTTAGGACTGCACGCAAGTGAGCAGACACCAC...CAGTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CAA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCGTCCCTTCTTGTCCCTaGGTCACTCTGTTTCCTGGC +
Preference number: 3 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCVPSCP*VTLFPG
Trigger: GCCAGGAAACAGAGTGACCAAGGGACAAGAAGGGAC...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CAA 90 bp TCTCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGACTTCACTACCAACCTaGAGCCTGTGCTGTCCTCTC +
Preference number: 3 (lower is better)
Translates to: SPECAPLPGCGGGPVLCRTSLPT*SLCCPL
Trigger: GAGAGGACAGCACAGGCTCAAGGTTGGTAGTGAAGT...CCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 72 bp CCTCGAGCTCCTCAGGATCTTAGCACCCAACTCTGCTaGCCTTGCTGCTGGGCAGTGCCTGTCCTAAGAGGG +
Preference number: 3 (lower is better)
Translates to: PRAPQDLSTQLC*PCCWAVPVLRG
Trigger: CCCTCTTAGGACAGGCACTGCCCAGCAGCAAGGGCAGCAGAGTTGGGTGCTAAGATCCTGAGGAGCTCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CAA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCAAGTTACATGGACACTaGGGGACAATCCTATACCAT +
Preference number: 3 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCKLHGH*GTILYH
Trigger: ATGGTATAGGATTGTCCCCAAGTGTCCATGTAACTT...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 72 bp AGGAGCCTGGGGCCCATCTTGGTTCTGCTGCTGAGTTaGTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCT +
Preference number: 3 (lower is better)
Translates to: RSLGPILVLLLS*WVALGKSLLVP
Trigger: AGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATGGGCCCCAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CAA 90 bp CATCTTGGTTCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCAACTCTGCTGCCCTaGCTGCTGGGCAGTGCCTGT +
Preference number: 3 (lower is better)
Translates to: HLGSAAELLGGFRQVPSCPTLLP*LLGSAC
Trigger: ACAGGCACTGCCCAGCAGCAAGGGCAGCAGAGTTGG...ACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 72 bp ACCCCGAACCTGACTTCACTACCAACCTTGAGCCTGTaGTGTCCTCTCTCTGCTGACGACACTGGTGACGCA +
Preference number: 3 (lower is better)
Translates to: TPNLTSLPTLSL*CPLSADDTGDA
Trigger: TGCGTCACCAGTGTCGTCAGCAGAGAGAGGACAGCACAGGCTCAAGGTTGGTAGTGAAGTCAGGTTCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 72 bp AAACCTCGAGCTCCTCAGGATCTTAGCACCCAACTCTaGTGCCCTTGCTGCTGGGCAGTGCCTGTCCTAAGA +
Preference number: 3 (lower is better)
Translates to: KPRAPQDLSTQL*CPCCWAVPVLR
Trigger: TCTTAGGACAGGCACTGCCCAGCAGCAAGGGCAGCAGAGTTGGGTGCTAAGATCCTGAGGAGCTCGAGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CCA 72 bp CTAGGGCAGCTGCGAGGAGACGTGTCCAGTGATGACTaGCAGAATCTGGACAAACGGACATCACTGCAAGGG +
Preference number: 3 (lower is better)
Translates to: LGQLRGDVSSDD*QNLDKRTSLQG
Trigger: CCCTTGCAGTGATGTCCGTTTGTCCAGATTCTGCCAGTCATCACTGGACACGTCTCCTCGCAGCTGCCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CCA 72 bp TGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTaGTCACTCTGTTTCCTGGCTAGCACTGCCAGCAAG +
Preference number: 3 (lower is better)
Translates to: CWVALGKSLLVP*SLCFLASTASK
Trigger: CTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR GCA 72 bp AACACTGGAGCAACTGATCAACACCACCACAGCCCATaGACCCCGAACCTGACTTCACTACCAACCTTGAGC +
Preference number: 3 (lower is better)
Translates to: NTGATDQHHHSP*TPNLTSLPTLS
Trigger: GCTCAAGGTTGGTAGTGAAGTCAGGTTCGGGGTGCATGGGCTGTGGTGGTGTTGATCAGTTGCTCCAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR TCA 72 bp ACATGCCAGCAAGGTCCCACGTCTCCGGGAAATACATaGTCTGCTCCCAGCTTCACACCCTACTGCCAAAAT +
Preference number: 3 (lower is better)
Translates to: TCQQGPTSPGNT*SAPSFTPYCQN
Trigger: ATTTTGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGACGTGGGACCTTGCTGGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CAA 90 bp TCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTGGTCAAGTTACATGGACACTaGGGGACAATCCTATACCAT +
Preference number: 3 (lower is better)
Translates to: SAAELLGGFRQVPSCPLVKLHGH*GTILYH
Trigger: ATGGTATAGGATTGTCCCCAAGTGTCCATGTAACTT...GACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR-3UTR CAA 90 bp CAGCTTGGCAGAGCTGATGACCCAAGTGGACTAAACACGGAGCTAGCAGAAACAAGCCATCCCTCTCTTTaGGAAGAAGTTCTGTCCTTA +
Preference number: 3 (lower is better)
Translates to: QLGRADDPSGLNTELAETSHPSL*EEVLSL
Trigger: TAAGGACAGAACTTCTTCCAAAAGAGAGGGATGGCT...TGTTTCTGCTAGCTCCGTGTTTAGTCCACTTGGGTCATCAGCTCTGCCAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTGCCGTGTGCCCACTGCCGAGAGGGCCCCGATaGACAGCCCACCAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: SAGLWRWPCALQAAVCPLPRGPR*TAHQRP
Trigger: CGGCCTTTGGTGGGCTGTGCATCGGGGCCCTCTCGG...CAGTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TCTCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGGGTGGCCCTGTGCTTTaGAGGCTGCCGTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SPECAPLPGCGGGPVLCRGGPVL*RLPCAH
Trigger: GTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACC...CCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TACAGCTGCCTGCCTGCCAGAGGCCAAGCATTCCTAAGCGTGGGCTGGGGGAGGCAGAGTGTGCCCCTCTaGCGGGCTGTGGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: YSCLPARGQAFLSVGWGRQSVPL*RAVAVA
Trigger: GGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTG...CCTCCCCCAGCCCACGCTTAGGAATGCTTGGCCTCTGGCAGGCAGGCAGCTGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTGCCGTGTGCCCACTGTGCCCACTGTCAGAGTaGGGTCTCCCCGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: SAGLWRWPCALQAAVCPLCPLSE*GLPDRL
Trigger: CAGCCTGTCGGGGAGACCCCACTCTGACAGTGGGCA...CAGTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp CCGATGGTTACAGGCTGCAGGCGGGACTATGGGGCTCCTCCTGAGGCCTGGTGCGCCGGGCTGTGGCGGTaGCCCTGTGCTTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PMVTGCRRDYGAPPEAWCAGLWR*PCALQA
Trigger: AGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGC...GCACCAGGCCTCAGGAGGAGCCCCATAGTCCCGCCTGCAGCCTGTAACCATCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp CCGATGGTTACAGGCTGCAGGCGGGACTATGGGGCTCCTCCTGAGGCCTGGTGCCTATGGGGCTCCTCCTaGGGCCTGGTGCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PMVTGCRRDYGAPPEAWCLWGSS*GLVPSS
Trigger: GCTGGAAGGCACCAGGCCTCAGGAGGAGCCCCATAG...GCACCAGGCCTCAGGAGGAGCCCCATAGTCCCGCCTGCAGCCTGTAACCATCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp GCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCCGAGAGGGCCCCGATaGACAGCCCACCAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: AARAMMRAPLPRRFWSSFPRGPR*TAHQRP
Trigger: CGGCCTTTGGTGGGCTGTGCATCGGGGCCCTCTCGG...GAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCGCAGGGCCCCCATGCTaGCAACCTCGCTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCAGPPC*QPRFAP
Trigger: AGGAGCAAAGCGAGGTTGGCAGCATGGGGGCCCTGC...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTCGTGAGTGTGGGCCTTaGAGGGCCCAGCCGATGGTT +
Preference number: 4 (lower is better)
Translates to: SRVCPSAGLWRWPCALQARECGP*RAQPMV
Trigger: AACCATCGGCTGGGCCCTGCAAGGCCCACACTCACG...AGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCGCGGGCCGACTTGATTaGCAGGTCCACTCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCAGRLD*QVHSEA
Trigger: GGCTTCCGAGTGGACCTGCCAATCAAGTCGGCCCGC...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TACAGCTGCCTGCCTGCCAGAGGCCAAGCATTCCTAAGCGTGGGCTGGGGGAGGGCCGGGCTGTGGCGGTaGCCCTGTGCTTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: YSCLPARGQAFLSVGWGRAGLWR*PCALQA
Trigger: AGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGC...CCTCCCCCAGCCCACGCTTAGGAATGCTTGGCCTCTGGCAGGCAGGCAGCTGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTGCCGTGTGCCCACTGCTCGGACCTTGTCTGTaGGTGTGGCCAGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: SAGLWRWPCALQAAVCPLLGPCL*VWPADG
Trigger: TCCATCTGCTGGCCACACGCACAGACAAGGTCCGAG...CAGTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCCGAGAGGGCCCCGATaGACAGCCCACCAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: KSICRSSTRHDESSPSEAPRGPR*TAHQRP
Trigger: CGGCCTTTGGTGGGCTGTGCATCGGGGCCCTCTCGG...CGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp CTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGGGGCAGGGCCCCCATGCTaGCAACCTCGCTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPFRGASGAASSTCPGDGAGPPC*QPRFAP
Trigger: AGGAGCAAAGCGAGGTTGGCAGCATGGGGGCCCTGC...CCCGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp TCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTGCCGTGTGCCCACTGCTTAGCACCCAACTCTaGTGCCCTTGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SAGLWRWPCALQAAVCPLLSTQL*CPCCWA
Trigger: TGCCCAGCAGCAAGGGCAGCAGAGTTGGGTGCTAAG...CAGTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGGGAAGGTCTCCAGAGTGTaGCCCTCTGCCGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LPFRGASGAASSTCPGDGKVSRV*PSAGLW
Trigger: CCACAGCCCGGCAGAGGGGCACACTCTGGAGACCTT...CCCGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACGGCTGGGGGAGGCCCTaGCCCTCTGTAGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RAMMRAPLPRRFWSSFLNGWGRP*PSVAAE
Trigger: CTCTGCTGCTACAGAGGGGCAGGGCCTCCCCCAGCC...GTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCCCGATGGTTACAGGCTaGAGGCGGGACTATGGGGCT +
Preference number: 4 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCPMVTG*RRDYGA
Trigger: AGCCCCATAGTCCCGCCTGCAGCCTGTAACCATCGG...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTGCAGGGCCCAGCCGATaGTTACAGGCTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: STRHDESSPSEALLEQLPAGPSR*LQAAGG
Trigger: CCCGCCTGCAGCCTGTAACCATCGGCTGGGCCCTGC...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp CGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACATCACCCACAGGGCGTaGGTGTGGGCCTTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RAMMRAPLPRRFWSSFLNITHRA*VWALQG
Trigger: GCCCTGCAAGGCCCACACTCACGCCCTGTGGGTGAT...GTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp GCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGCCCACCCACCCACCGTaGCCATCACCCACAGGGCGT +
Preference number: 4 (lower is better)
Translates to: AMMRAPLPRRFWSSFLNLPTHPP*PSPTGR
Trigger: ACGCCCTGTGGGTGATGGTCACGGTGGGTGGGTGGG...CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp CTGGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCCAGAGAGAGGGTGCTCCCACCCACCCACCGTaGCCATCACCCACAGGGCGT +
Preference number: 4 (lower is better)
Translates to: LGSACPKRGLPKGQREGAPTHPP*PSPTGR
Trigger: ACGCCCTGTGGGTGATGGTCACGGTGGGTGGGTGGG...AGCACCCTCTCTCTGGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCTTTTGGCGTCCACAGTaGCAGTCCCCTGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCFWRPQ*QSPGSW
Trigger: CCAGCTTCCAGGGGACTGTCACTGTGGACGCCAAAA...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGGCAGGGCCCCCATGCTaGCAACCTCGCTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSPSEALLEQLPQPVRETAGPPC*QPRFAP
Trigger: AGGAGCAAAGCGAGGTTGGCAGCATGGGGGCCCTGC...CGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp CCGATGGTTACAGGCTGCAGGCGGGACTATGGGGCTCCTCCTGAGGCCTGGTGCTTGCAGGCTGCCGTGTaGCCACTGTCAGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PMVTGCRRDYGAPPEAWCLQAAV*PLSEWG
Trigger: ACCCCACTCTGACAGTGGGCACACGGCAGCCTGCAA...GCACCAGGCCTCAGGAGGAGCCCCATAGTCCCGCCTGCAGCCTGTAACCATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp GCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAAGGTCTCCAGAGTGTaGCCCTCTGCCGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ARAMMRAPLPRRFWSSFLKVSRV*PSAGLW
Trigger: CCACAGCCCGGCAGAGGGGCACACTCTGGAGACCTT...GAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTCAAGAGCCTCTCCCCTaGTCAGGACTGGGTCTAGAC +
Preference number: 4 (lower is better)
Translates to: SRVCPSAGLWRWPCALQAQEPLP*SGLGLD
Trigger: GTCTAGACCCAGTCCTGAGCAGGGGAGAGGCTCTTG...AGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CTGGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCCAGAGAGAGGGTGCTGGCTGGGGGAGGCCCTaGCCCTCTGTAGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LGSACPKRGLPKGQREGAGWGRP*PSVAAE
Trigger: CTCTGCTGCTACAGAGGGGCAGGGCCTCCCCCAGCC...AGCACCCTCTCTCTGGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGGCGGGCCGACTTGATTaGCAGGTCCACTCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SSPSEALLEQLPQPVRETAGRLD*QVHSEA
Trigger: GGCTTCCGAGTGGACCTGCCAATCAAGTCGGCCCGC...CGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp TCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTCTTCCGAGGCGCTTCTaGAGCAGCTTCCTCAACCTG +
Preference number: 4 (lower is better)
Translates to: SRVCPSAGLWRWPCALQALPRRF*SSFLNL
Trigger: CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAG...AGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp GCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCTGCCCACTGTCAGAGTaGGGTCTCCCCGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: AARAMMRAPLPRRFWSSFCPLSE*GLPDRL
Trigger: CAGCCTGTCGGGGAGACCCCACTCTGACAGTGGGCA...GAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGTGTGCCCCTCTGCCGGGCTGTACAGTGACAGTCCCCTaGAAGCTGGGGTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SWLALPARSPECAPLPGCTVTVP*KLGSAP
Trigger: GGGGGCTGACCCCAGCTTCCAGGGGACTGTCACTGT...ACAGCCCGGCAGAGGGGCACACTCTGGAGACCTTGCTGGCAGTGCTAGCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp GCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCCCGGAGGCTTGTCGTaGGTGTGGGTCCCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: AARAMMRAPLPRRFWSSFPGGLS*VWVPFH
Trigger: ATGGAAGGGGACCCACACCCACGACAAGCCTCCGGG...GAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR TCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCCTGAACACAGCTGGGTaGTCTTCAGCCCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCLNTAG*SSAQKV
Trigger: CACCTTCTGGGCTGAAGATCACCCAGCTGTGTTCAG...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp GCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCAGCACCCAACTCTGCTaGCCTTGCTGCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: AARAMMRAPLPRRFWSSFSTQLC*PCCWAV
Trigger: CACTGCCCAGCAGCAAGGGCAGCAGAGTTGGGTGCT...GAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTGCCGTGTGCCCACTGGCCAGGAGTGTCTTCTaGGAAAGCCATCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SAGLWRWPCALQAAVCPLARSVF*ESHPSL
Trigger: AAGAGAGGGATGGCTTTCCCAGAAGACACTCCTGGC...CAGTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTGTTTCTGGAGAGACTTaGCCGGAGAAGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: STRHDESSPSEALLEQLPVSGET*PEKGRG
Trigger: GCCCCGGCCCTTCTCCGGCCAAGTCTCTCCAGAAAC...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR TCA 90 bp CCGATGGTTACAGGCTGCAGGCGGGACTATGGGGCTCCTCCTGAGGCCTGGTGCCTGAACACAGCTGGGTaGTCTTCAGCCCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PMVTGCRRDYGAPPEAWCLNTAG*SSAQKV
Trigger: CACCTTCTGGGCTGAAGATCACCCAGCTGTGTTCAG...GCACCAGGCCTCAGGAGGAGCCCCATAGTCCCGCCTGCAGCCTGTAACCATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGGGAACTGGATAAGCACGTaGTGGGCCCCCAGAAGACGT +
Preference number: 4 (lower is better)
Translates to: LPFRGASGAASSTCPGDGNWIST*WAPRRR
Trigger: ACGTCTTCTGGGGGCCCAGCACGTGCTTATCCAGTT...CCCGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp TCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTGCCGTGTGCCCACTGCCTCTCATCACCATCTaGTGCTCCTTCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SAGLWRWPCALQAAVCPLPLITI*CSFSCF
Trigger: AAAGCAGCTGAAGGAGCAGCAGATGGTGATGAGAGG...CAGTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACAGAGCAGGGCCCCCATaGTGCCAACCTCGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RAMMRAPLPRRFWSSFLNRAGPP*CQPRFA
Trigger: AGCAAAGCGAGGTTGGCAGCATGGGGGCCCTGCTCT...GTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTTTGCAGGCTGCCGTGTaGCCACTGTCAGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: STRHDESSPSEALLEQLPLQAAV*PLSEWG
Trigger: ACCCCACTCTGACAGTGGGCACACGGCAGCCTGCAA...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp GCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCGCAAAGGCCACCAACTaGATAAGCACGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ARAMMRAPLPRRFWSSFLAKATN*ISTCWA
Trigger: GGCCCAGCACGTGCTTATCCAGTTGGTGGCCTTTGC...GAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCTACCGGTTGAGTTCATaGACCATGGAGGTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCYRLSS*TMEVSR
Trigger: CCGAGAGACCTCCATGGTCCATGAACTCAACCGGTA...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp AAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGTTGTGGGGAAACAGGTaGGACGGCTGCAGCCGCATA +
Preference number: 4 (lower is better)
Translates to: KSICRSSTRHDESSPSEALWGNR*DGCSRI
Trigger: TATGCGGCTGCAGCCGTCTCACCTGTTTCCCCACAA...CGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp CTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGGGTCTGGCGAGAAGGAATaGGGGAACAGGTTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LPFRGASGAASSTCPGDGSGEKE*GNRLRR
Trigger: TCTCCTCAACCTGTTCCCTCATTCCTTCTCGCCAGA...CCCGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR GCA 90 bp ATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGCTCGGACCTTGTCTGTaGGTGTGGCCAGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: MRAPLPRRFWSSFLNLSGLGPCL*VWPADG
Trigger: TCCATCTGCTGGCCACACGCACAGACAAGGTCCGAG...CCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp TCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTGCCGTGTGCCCACTGCTCCTTCAGCTGCTTTaGAACATCTTTGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SAGLWRWPCALQAAVCPLLLQLL*NIFGRG
Trigger: TCCTCTGCCAAAGATGTTGCAAAGCAGCTGAAGGAG...CAGTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGGGGTAGATGATTGTGACTaGGAGCAGGATCCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: LPFRGASGAASSTCPGDGVDDCD*EQDPGS
Trigger: GGAACCGGGATCCTGCTCGCAGTCACAATCATCTAC...CCCGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp GCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCGAAGTCGGTGGTGTCTaGTCACTTGCGTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: ARAMMRAPLPRRFWSSFLEVGGV*SLACSP
Trigger: AGGACTGCACGCAAGTGAGCAGACACCACCGACTTC...GAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGTGTGCCCCTCTGCCGGGCTGTCCAACCTTGAGCCTGTaGTGTCCTCTCTCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SWLALPARSPECAPLPGCPTLSL*CPLSAD
Trigger: GTCAGCAGAGAGAGGACAGCACAGGCTCAAGGTTGG...ACAGCCCGGCAGAGGGGCACACTCTGGAGACCTTGCTGGCAGTGCTAGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCACCACCACAGCCCATaGACCCCGAACCTGACTTCA +
Preference number: 4 (lower is better)
Translates to: STRHDESSPSEALLEQLPHHHSP*TPNLTS
Trigger: TGAAGTCAGGTTCGGGGTGCATGGGCTGTGGTGGTG...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TGGCAGAATCTGGACAAACGGACATCACTGCAAGGGTCTGTCCACCTAGCTTGGCAGAGTGTGCCCCTCTaGCGGGCTGTGGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: WQNLDKRTSLQGSVHLAWQSVPL*RAVAVA
Trigger: GGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTG...CCAAGCTAGGTGGACAGACCCTTGCAGTGATGTCCGTTTGTCCAGATTCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGGGGTTCTGCTGCTGAGTTaGTGGGTGGCTTTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LPFRGASGAASSTCPGDGVLLLS*WVALGK
Trigger: CTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAAC...CCCGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TGCTCAGGACTGGGTCTAGACAAGGCCACGTGTGATAGGGTGGTAAGCCCTGGGCGTGAGTGTGGGCCTTaGAGGGCCCAGCCGATGGTT +
Preference number: 4 (lower is better)
Translates to: CSGLGLDKATCDRVVSPGRECGP*RAQPMV
Trigger: AACCATCGGCTGGGCCCTGCAAGGCCCACACTCACG...CCCAGGGCTTACCACCCTATCACACGTGGCCTTGTCTAGACCCAGTCCTGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp CGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACTGGATAAGCACGTGCTaGGCCCCCAGAAGACGTGTC +
Preference number: 4 (lower is better)
Translates to: RAMMRAPLPRRFWSSFLNWISTC*APRRRV
Trigger: GACACGTCTTCTGGGGGCCCAGCACGTGCTTATCCA...GTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp GCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCATGGAGGTCTCTCGGTaGCCTCTCATCACCATCTGC +
Preference number: 4 (lower is better)
Translates to: ARAMMRAPLPRRFWSSFLMEVSR*PLITIC
Trigger: GCAGATGGTGATGAGAGGCCACCGAGAGACCTCCAT...GAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCAGACAAATCCACAGATaGCCAGGAGTGTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCRQIHR*PGVSSG
Trigger: CCCAGAAGACACTCCTGGCCATCTGTGGATTTGTCT...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TCCCACGTCTCCGGGAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCACCCTCTGCCGGGCTGTaGCGGTGGCCCTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SHVSGKYMICSQLHTLLPPSAGL*RWPCAL
Trigger: CAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGG...TGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGACGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp GCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCCTGCTGCTGAGTTGCTaGGTGGCTTTAGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: ARAMMRAPLPRRFWSSFLLLLSC*VALGKS
Trigger: GGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAG...GAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CAA 72 bp AAGCCCTGGGCCATATGGAGGAGCCTGGGGCCCATCTaGGTTCTGCTGCTGAGTTGCTGGGTGGCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: KPWAIWRSLGPI*VLLLSCWVALG
Trigger: GCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATGGGCCCCAGGCTCCTCCATATGGCCCAGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCCCAGCAACAAAGAGCTaGATGGTGATTAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCPATKS*MVISRQ
Trigger: TTGCCTGCTAATCACCATTCAGCTCTTTGTTGCTGG...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp GCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCCCAGCAAGTTGCCACTaGAGCGAGCTGAGAGCATTT +
Preference number: 4 (lower is better)
Translates to: ARAMMRAPLPRRFWSSFLPASCH*SELRAF
Trigger: AAATGCTCTCAGCTCGCTTCAGTGGCAACTTGCTGG...GAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR TCA 90 bp GCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAAACACTGGAGCAACTaGTCAACACCACCACAGCCC +
Preference number: 4 (lower is better)
Translates to: ARAMMRAPLPRRFWSSFLKHWSN*STPPQP
Trigger: GGGCTGTGGTGGTGTTGATCAGTTGCTCCAGTGTTT...GAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGATCACCCACAGGGCGTaGGTGTGGGCCTTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPITHRA*VWALQG
Trigger: GCCCTGCAAGGCCCACACTCACGCCCTGTGGGTGAT...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTAGCACCCTCGCTGTCTaGGTCATTAAGCAAACCCGG +
Preference number: 4 (lower is better)
Translates to: STRHDESSPSEALLEQLPSTLAV*VIKQTR
Trigger: CCGGGTTTGCTTAATGACTCAGACAGCGAGGGTGCT...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR GCA 90 bp AGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGTTCCAGAAATTTGATTaGCATGGCGGCGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SSPSEALLEQLPQPVRETFQKFD*HGGGCS
Trigger: CGAGCAGCCGCCGCCATGGCAATCAAATTTCTGGAA...CGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243253.8
CDS-3UTR GCA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTAACTGGATAAGCACGTaGTGGGCCCCCAGAAGACGT +
Preference number: 4 (lower is better)
Translates to: STRHDESSPSEALLEQLPNWIST*WAPRRR
Trigger: ACGTCTTCTGGGGGCCCAGCACGTGCTTATCCAGTT...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp ATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAACTGGATAAGCACGTaGTGGGCCCCCAGAAGACGT +
Preference number: 4 (lower is better)
Translates to: MRAPLPRRFWSSFLNLSGNWIST*WAPRRR
Trigger: ACGTCTTCTGGGGGCCCAGCACGTGCTTATCCAGTT...CCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCCTCCTTCAGCTGCTTTaGAACATCTTTGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCLLQLL*NIFGRG
Trigger: TCCTCTGCCAAAGATGTTGCAAAGCAGCTGAAGGAG...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TGCTCAGGACTGGGTCTAGACAAGGCCACGTGTGATAGGGTGGTAAGCCCTGGGCTCTGCTGCCCTTGCTaGTGGGCAGTGCCTGTCCTA +
Preference number: 4 (lower is better)
Translates to: CSGLGLDKATCDRVVSPGLCCPC*WAVPVL
Trigger: TAGGACAGGCACTGCCCAGCAGCAAGGGCAGCAGAG...CCCAGGGCTTACCACCCTATCACACGTGGCCTTGTCTAGACCCAGTCCTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CTTGTCCCTTGGTCACTCTGTTTCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGGTGGCCCTGTGCTTTaGAGGCTGCCGTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LVPWSLCFLASTASKVSRGGPVL*RLPCAH
Trigger: GTGGGCACACGGCAGCCTGCAAAGCACAGGGCCACC...TCTGGAGACCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACCAAGGGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CTTGTCCCTTGGTCACTCTGTTTCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGTGGCGGTGGCCCTGTaGTTTGCAGGCTGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: LVPWSLCFLASTASKVSRVAVAL*FAGCRV
Trigger: CACACGGCAGCCTGCAAAGCACAGGGCCACCGCCAC...TCTGGAGACCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACCAAGGGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp GCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGGTACAGCTGCCTGCCTaGCAGAGGCCAAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: AMMRAPLPRRFWSSFLNLVQLPA*QRPSIP
Trigger: AGGAATGCTTGGCCTCTGGCAGGCAGGCAGCTGTAC...CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp GCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTTGGGTACAGCTGCCTaGCTGCCAGAGGCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: AMMRAPLPRRFWSSFLNLLGTAA*LPEAKH
Trigger: ATGCTTGGCCTCTGGCAGGCAGGCAGCTGTACCCAA...CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp CTGGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCCAGAGAGAGGGTGCTGCAAAGGCCACCAACTaGATAAGCACGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LGSACPKRGLPKGQREGAAKATN*ISTCWA
Trigger: GGCCCAGCACGTGCTTATCCAGTTGGTGGCCTTTGC...AGCACCCTCTCTCTGGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TCTCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGGCTTTGCAACATCTTTaGCAGAGGAACCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: SPECAPLPGCGGGPVLCRALQHL*QRNLRP
Trigger: AGGTCTCAGGTTCCTCTGCCAAAGATGTTGCAAAGC...CCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp GCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTGCTGCCCTTGCTGCTaGGCAGTGCCTGTCCTAAGA +
Preference number: 4 (lower is better)
Translates to: AMMRAPLPRRFWSSFLNLCCPCC*AVPVLR
Trigger: TCTTAGGACAGGCACTGCCCAGCAGCAAGGGCAGCA...CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTGGTCACTCTGTTTCCTaGCTAGCACTGCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: STRHDESSPSEALLEQLPGHSVS*LALPAR
Trigger: CCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACC...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp GCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCAGGTGTAGGGGCTTGTaGGCACTAAGTCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: AARAMMRAPLPRRFWSSFRCRGL*ALSQFL
Trigger: CAGAAACTGACTTAGTGCTCACAAGCCCCTACACCT...GAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACGTTCTGCTGCTGAGTTaGTGGGTGGCTTTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: RAMMRAPLPRRFWSSFLNVLLLS*WVALGK
Trigger: CTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAAC...GTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp GCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCCGTGTGGCCAGCAGATaGAAAAGTGCGATGATAGCA +
Preference number: 4 (lower is better)
Translates to: ARAMMRAPLPRRFWSSFLRVASR*KSAMIA
Trigger: TGCTATCATCGCACTTTTCCATCTGCTGGCCACACG...GAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp TGCTCAGGACTGGGTCTAGACAAGGCCACGTGTGATAGGGTGGTAAGCCCTGGGTGGATAAGCACGTGCTaGGCCCCCAGAAGACGTGTC +
Preference number: 4 (lower is better)
Translates to: CSGLGLDKATCDRVVSPGWISTC*APRRRV
Trigger: GACACGTCTTCTGGGGGCCCAGCACGTGCTTATCCA...CCCAGGGCTTACCACCCTATCACACGTGGCCTTGTCTAGACCCAGTCCTGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp CTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGGGGCTTTGCAACATCTTTaGCAGAGGAACCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: LPFRGASGAASSTCPGDGALQHL*QRNLRP
Trigger: AGGTCTCAGGTTCCTCTGCCAAAGATGTTGCAAAGC...CCCGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp CTGGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCCAGAGAGAGGGTGCTATGGAGGTCTCTCGGTaGCCTCTCATCACCATCTGC +
Preference number: 4 (lower is better)
Translates to: LGSACPKRGLPKGQREGAMEVSR*PLITIC
Trigger: GCAGATGGTGATGAGAGGCCACCGAGAGACCTCCAT...AGCACCCTCTCTCTGGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp ATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGGCCAGGAGTGTCTTCTaGGAAAGCCATCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: MRAPLPRRFWSSFLNLSGARSVF*ESHPSL
Trigger: AAGAGAGGGATGGCTTTCCCAGAAGACACTCCTGGC...CCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAGAAAGGAAGTCGGTaGTGTCTGCTCACTTGCGTG +
Preference number: 4 (lower is better)
Translates to: STRHDESSPSEALLEQLPQKGSR*CLLTCV
Trigger: CACGCAAGTGAGCAGACACCACCGACTTCCTTTCTG...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp GCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGAGTGGGAGAACCATGTaGGTAGGAGGGCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: AMMRAPLPRRFWSSFLNLSGRTM*VGGHQV
Trigger: GACCTGATGCCCTCCTACCCACATGGTTCTCCCACT...CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp CAGCTTGGCAGAGCTGATGACCCAAGTGGACTAAACACGGAGCTAGCAGAAACAGCTCCTCCTGAGGCCTaGTGCCTTCCAGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: QLGRADDPSGLNTELAETAPPEA*CLPAPC
Trigger: GCAGGGGGCTGGAAGGCACCAGGCCTCAGGAGGAGC...TGTTTCTGCTAGCTCCGTGTTTAGTCCACTTGGGTCATCAGCTCTGCCAAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp GCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTTCAGGAAGGCCTCCTaGGAGAGTACCTTTGTGCCG +
Preference number: 4 (lower is better)
Translates to: AMMRAPLPRRFWSSFLNLFRKAS*ESTFVP
Trigger: CGGCACAAAGGTACTCTCCCAGGAGGCCTTCCTGAA...CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR TCA 90 bp TCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTACGTATAGAAGAGCTTaGTGGGATAGGTGTTGTACT +
Preference number: 4 (lower is better)
Translates to: SRVCPSAGLWRWPCALQATYRRA*WDRCCT
Trigger: AGTACAACACCTATCCCATCAAGCTCTTCTATACGT...AGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCACGTATAGAAGAGCTTaGTGGGATAGGTGTTGTACT +
Preference number: 4 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCTYRRA*WDRCCT
Trigger: AGTACAACACCTATCCCATCAAGCTCTTCTATACGT...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp GCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCTTTGGCAGAGGAACCTaGGACCTCAATCCACGTTTT +
Preference number: 4 (lower is better)
Translates to: ARAMMRAPLPRRFWSSFLFGRGT*DLNPRF
Trigger: AAAACGTGGATTGAGGTCTCAGGTTCCTCTGCCAAA...GAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR TCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCTCTCTGGCAGTCGGCTaGATAAAATTTCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCSLAVG*IKFHFH
Trigger: GTGAAAGTGAAATTTTATTCAGCCGACTGCCAGAGA...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp GCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCAGTAGTGGGGCTGAATaGCTTCCATACGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: AARAMMRAPLPRRFWSSFSSGAE*LPYDGF
Trigger: GAAACCATCGTATGGAAGGCATTCAGCCCCACTACT...GAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp TCTCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGGAAATAGATGACCACTaGAAAGACAAAGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: SPECAPLPGCGGGPVLCREIDDH*KDKDGG
Trigger: GCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTC...CCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGTGCTGCTCCTTCAGCTaGTTTGCAACATCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SSPSEALLEQLPQPVRETCCSFS*FATSLA
Trigger: TGCCAAAGATGTTGCAAAGCAGCTGAAGGAGCAGCA...CGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp CGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCCTCTCATCACCATCTaGTGCTCCTTCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RAMMRAPLPRRFWSSFLNPLITI*CSFSCF
Trigger: AAAGCAGCTGAAGGAGCAGCAGATGGTGATGAGAGG...GTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp TCCCACGTCTCCGGGAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAAGAGCAGGGCCCCCATaGTGCCAACCTCGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SHVSGKYMICSQLHTLLPRAGPP*CQPRFA
Trigger: AGCAAAGCGAGGTTGGCAGCATGGGGGCCCTGCTCT...TGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGACGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TCCCACGTCTCCGGGAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCACTCTGCTGCCCTTGCTaGTGGGCAGTGCCTGTCCTA +
Preference number: 4 (lower is better)
Translates to: SHVSGKYMICSQLHTLLPLCCPC*WAVPVL
Trigger: TAGGACAGGCACTGCCCAGCAGCAAGGGCAGCAGAG...TGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGACGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AGCCCATGCACCCCGAACCTGACTTCACTACCAACCTTGAGCCTGTGCTGTCCTCTGTGCTTTGCAGGCTaGCGTGTGCCCACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SPCTPNLTSLPTLSLCCPLCFAG*RVPTVR
Trigger: TCTGACAGTGGGCACACGGCAGCCTGCAAAGCACAG...AGGACAGCACAGGCTCAAGGTTGGTAGTGAAGTCAGGTTCGGGGTGCATGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp CCCACAGGGCGTGAGTGTGGGCCTTGCAGGGCCCAGCCGATGGTTACAGGCTGCATGCCAAATAACTTTTaGGCTCCGTTGAAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PTGRECGPCRAQPMVTGCMPNNF*APLKRA
Trigger: AGCTCTCTTCAACGGAGCCCAAAAGTTATTTGGCAT...GCAGCCTGTAACCATCGGCTGGGCCCTGCAAGGCCCACACTCACGCCCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243253.8
CDS-3UTR CCA 90 bp GCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCGCTTTGCAACATCTTTaGCAGAGGAACCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: ARAMMRAPLPRRFWSSFLALQHL*QRNLRP
Trigger: AGGTCTCAGGTTCCTCTGCCAAAGATGTTGCAAAGC...GAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp AGCCCATGCACCCCGAACCTGACTTCACTACCAACCTTGAGCCTGTGCTGTCCTTCTGTCCACCTAGCTTaGCCAGGCTCAGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SPCTPNLTSLPTLSLCCPSVHLA*PGSAWQ
Trigger: CTGCCAAGCTGAGCCTGGCCAAGCTAGGTGGACAGA...AGGACAGCACAGGCTCAAGGTTGGTAGTGAAGTCAGGTTCGGGGTGCATGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGTGTGCCCCTCTGCCGGGCTGTATGACTGGCAGAATCTaGACAAACGGACATCACTGC +
Preference number: 4 (lower is better)
Translates to: SWLALPARSPECAPLPGCMTGRI*TNGHHC
Trigger: GCAGTGATGTCCGTTTGTCCAGATTCTGCCAGTCAT...ACAGCCCGGCAGAGGGGCACACTCTGGAGACCTTGCTGGCAGTGCTAGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTGTGTCCAGTGATGACTaGCAGAATCTGGACAAACGG +
Preference number: 4 (lower is better)
Translates to: STRHDESSPSEALLEQLPVSSDD*QNLDKR
Trigger: CCGTTTGTCCAGATTCTGCCAGTCATCACTGGACAC...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TGCTCAGGACTGGGTCTAGACAAGGCCACGTGTGATAGGGTGGTAAGCCCTGGGCTGCTGCTGAGTTGCTaGGTGGCTTTAGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: CSGLGLDKATCDRVVSPGLLLSC*VALGKS
Trigger: GGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAG...CCCAGGGCTTACCACCCTATCACACGTGGCCTTGTCTAGACCCAGTCCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGAATGGGATGAGTTTCTaGAGAGACTTGGCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: SSPSEALLEQLPQPVRETNGMSF*RDLAGE
Trigger: TTCTCCGGCCAAGTCTCTCCAGAAACTCATCCCATT...CGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR TCA 90 bp CGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCCAGCAACAAAGAGCTaGATGGTGATTAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: RAMMRAPLPRRFWSSFLNPATKS*MVISRQ
Trigger: TTGCCTGCTAATCACCATTCAGCTCTTTGTTGCTGG...GTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR TCA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTTTTGGCAGAGGAACCTaGGACCTCAATCCACGTTTT +
Preference number: 4 (lower is better)
Translates to: STRHDESSPSEALLEQLPFGRGT*DLNPRF
Trigger: AAAACGTGGATTGAGGTCTCAGGTTCCTCTGCCAAA...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR TCA 90 bp CTGGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCCAGAGAGAGGGTGCTTGCTTCCAACCAGAGTaGGAAATTCCCTTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LGSACPKRGLPKGQREGACFQPE*EIPFVG
Trigger: CCCCACAAAGGGAATTTCTCACTCTGGTTGGAAGCA...AGCACCCTCTCTCTGGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGAGTAGTGGGGCTGAATaGCTTCCATACGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: KSICRSSTRHDESSPSEASSGAE*LPYDGF
Trigger: GAAACCATCGTATGGAAGGCATTCAGCCCCACTACT...CGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp CTTGTCCCTTGGTCACTCTGTTTCCTGGCTAGCACTGCCAGCAAGGTCTCCAGACTCGGACCTTGTCTGTaGGTGTGGCCAGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: LVPWSLCFLASTASKVSRLGPCL*VWPADG
Trigger: TCCATCTGCTGGCCACACGCACAGACAAGGTCCGAG...TCTGGAGACCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACCAAGGGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CCGATGGTTACAGGCTGCAGGCGGGACTATGGGGCTCCTCCTGAGGCCTGGTGCGAAATAGATGACCACTaGAAAGACAAAGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: PMVTGCRRDYGAPPEAWCEIDDH*KDKDGG
Trigger: GCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTC...GCACCAGGCCTCAGGAGGAGCCCCATAGTCCCGCCTGCAGCCTGTAACCATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGGGGAAATAGATGACCACTaGAAAGACAAAGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: LPFRGASGAASSTCPGDGEIDDH*KDKDGG
Trigger: GCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTC...CCCGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp AAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTCCTTCAGCTGCTTTaGAACATCTTTGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KSICRSSTRHDESSPSEALLQLL*NIFGRG
Trigger: TCCTCTGCCAAAGATGTTGCAAAGCAGCTGAAGGAG...CGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp CTGGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCCAGAGAGAGGGTGCTAGGATCAGGGCATCCTaGAAAACATCCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LGSACPKRGLPKGQREGARIRAS*KTSLVP
Trigger: TGGGACCAAGGATGTTTTGCAGGATGCCCTGATCCT...AGCACCCTCTCTCTGGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGCTGTGCTTTGCAGGCTaGCGTGTGCCCACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPLCFAG*RVPTVR
Trigger: TCTGACAGTGGGCACACGGCAGCCTGCAAAGCACAG...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CTTGTCCCTTGGTCACTCTGTTTCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGTACAGCTGCCTGCCTaGCAGAGGCCAAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: LVPWSLCFLASTASKVSRVQLPA*QRPSIP
Trigger: AGGAATGCTTGGCCTCTGGCAGGCAGGCAGCTGTAC...TCTGGAGACCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACCAAGGGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTGGTCTTGGGTACAGCTGCCTaGCTGCCAGAGGCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: SAAELLGGFRQVPSCPLVLGTAA*LPEAKH
Trigger: ATGCTTGGCCTCTGGCAGGCAGGCAGCTGTACCCAA...GACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp ATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGGGGAGAGTACCTTTGTaGCGAGCCTTGATAGATTCT +
Preference number: 4 (lower is better)
Translates to: MRAPLPRRFWSSFLNLSGGRVPL*RALIDS
Trigger: AGAATCTATCAAGGCTCGGCACAAAGGTACTCTCCC...CCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR CCA 90 bp ATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGCTGAATCTTCCTCTCTaGCTTCTGAATTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: MRAPLPRRFWSSFLNLSGLNLPL*LLNFRQ
Trigger: CTGCCGGAAATTCAGAAGCCAGAGAGGAAGATTCAG...CCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000464451.5
CDS-3UTR CCA 90 bp GCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGCGTGTGGCCAGCAGATaGAAAAGTGCGATGATAGCA +
Preference number: 4 (lower is better)
Translates to: AMMRAPLPRRFWSSFLNLRVASR*KSAMIA
Trigger: TGCTATCATCGCACTTTTCCATCTGCTGGCCACACG...CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp TCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTGGTCTGGATAAGCACGTGCTaGGCCCCCAGAAGACGTGTC +
Preference number: 4 (lower is better)
Translates to: SAAELLGGFRQVPSCPLVWISTC*APRRRV
Trigger: GACACGTCTTCTGGGGGCCCAGCACGTGCTTATCCA...GACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp CTTGTCCCTTGGTCACTCTGTTTCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGCAAAGGCCACCAACTaGATAAGCACGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LVPWSLCFLASTASKVSRAKATN*ISTCWA
Trigger: GGCCCAGCACGTGCTTATCCAGTTGGTGGCCTTTGC...TCTGGAGACCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACCAAGGGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGATGTATACAACTGCATaGACCGGGTCTTCTAACACG +
Preference number: 4 (lower is better)
Translates to: SSPSEALLEQLPQPVRETMYTTA*TGSSNT
Trigger: CGTGTTAGAAGACCCGGTCCATGCAGTTGTATACAT...CGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp TGCTCAGGACTGGGTCTAGACAAGGCCACGTGTGATAGGGTGGTAAGCCCTGGGTACCGGTTGAGTTCATaGACCATGGAGGTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: CSGLGLDKATCDRVVSPGYRLSS*TMEVSR
Trigger: CCGAGAGACCTCCATGGTCCATGAACTCAACCGGTA...CCCAGGGCTTACCACCCTATCACACGTGGCCTTGTCTAGACCCAGTCCTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGATGACTGGCAGAATCTaGACAAACGGACATCACTGC +
Preference number: 4 (lower is better)
Translates to: KSICRSSTRHDESSPSEAMTGRI*TNGHHC
Trigger: GCAGTGATGTCCGTTTGTCCAGATTCTGCCAGTCAT...CGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGAATTCTGAACACAGCTaGGTGATCTTCAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SSPSEALLEQLPQPVRETNSEHS*VIFSPE
Trigger: TTCTGGGCTGAAGATCACCCAGCTGTGTTCAGAATT...CGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp CAGCTTGGCAGAGCTGATGACCCAAGTGGACTAAACACGGAGCTAGCAGAAACAACAGTGACAGTCCCCTaGAAGCTGGGGTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: QLGRADDPSGLNTELAETTVTVP*KLGSAP
Trigger: GGGGGCTGACCCCAGCTTCCAGGGGACTGTCACTGT...TGTTTCTGCTAGCTCCGTGTTTAGTCCACTTGGGTCATCAGCTCTGCCAAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGAGCCTTGATAGATTCTaGCGAGAAGGAATGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SSPSEALLEQLPQPVRETSLDRF*REGMRE
Trigger: TTCCCTCATTCCTTCTCGCCAGAATCTATCAAGGCT...CGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
3UTR CAA 72 bp CAAACGGACATCACTGCAAGGGTCTGTCCACCTAGCTaGGCCAGGCTCAGCTTGGCAGAGCTGATGACCCAA +
Preference number: 4 (lower is better)
Translates to: QTDITARVCPPS*ARLSLAELMTQ
Trigger: TTGGGTCATCAGCTCTGCCAAGCTGAGCCTGGCCAAGCTAGGTGGACAGACCCTTGCAGTGATGTCCGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp TCCCACGTCTCCGGGAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAGCCACTGAAGCGAGCTaGGAGCATTTGGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: SHVSGKYMICSQLHTLLPATEAS*EHLGDD
Trigger: GTCATCTCCCAAATGCTCTCAGCTCGCTTCAGTGGC...TGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGACGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp CTGGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCCAGAGAGAGGGTGCTTTTGGCAGAGGAACCTaGGACCTCAATCCACGTTTT +
Preference number: 4 (lower is better)
Translates to: LGSACPKRGLPKGQREGAFGRGT*DLNPRF
Trigger: AAAACGTGGATTGAGGTCTCAGGTTCCTCTGCCAAA...AGCACCCTCTCTCTGGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp TCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAGTGTGCCCCTCTGCCGGGCTGTTCTCTGGCAGTCGGCTaGATAAAATTTCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: SWLALPARSPECAPLPGCSLAVG*IKFHFH
Trigger: GTGAAAGTGAAATTTTATTCAGCCGACTGCCAGAGA...ACAGCCCGGCAGAGGGGCACACTCTGGAGACCTTGCTGGCAGTGCTAGCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TCCTTGGTCCCACCAATGTCTAAAGCCAGCTCGAAACCTCGAGCTCCTCAGGATAGGCCAGAGAGAGGGTaGTCATCTCCAGGACCTAGG +
Preference number: 4 (lower is better)
Translates to: SLVPPMSKASSKPRAPQDRPERG*SSPGPR
Trigger: CCTAGGTCCTGGAGATGAGCACCCTCTCTCTGGCCT...ATCCTGAGGAGCTCGAGGTTTCGAGCTGGCTTTAGACATTGGTGGGACCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TGGCAGAATCTGGACAAACGGACATCACTGCAAGGGTCTGTCCACCTAGCTTGGAGGCCAGAGAGAGGGTaGTCATCTCCAGGACCTAGG +
Preference number: 4 (lower is better)
Translates to: WQNLDKRTSLQGSVHLAWRPERG*SSPGPR
Trigger: CCTAGGTCCTGGAGATGAGCACCCTCTCTCTGGCCT...CCAAGCTAGGTGGACAGACCCTTGCAGTGATGTCCGTTTGTCCAGATTCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TCCTTGGTCCCACCAATGTCTAAAGCCAGCTCGAAACCTCGAGCTCCTCAGGATCAAGAGCCTCTCCCCTaGTCAGGACTGGGTCTAGAC +
Preference number: 4 (lower is better)
Translates to: SLVPPMSKASSKPRAPQDQEPLP*SGLGLD
Trigger: GTCTAGACCCAGTCCTGAGCAGGGGAGAGGCTCTTG...ATCCTGAGGAGCTCGAGGTTTCGAGCTGGCTTTAGACATTGGTGGGACCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCTGCCTTCCAGCCCCCTaGCCACCAGCTTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: NIIKSPYAAAARAMMRAPCLPAP*PPAWVQ
Trigger: CTGTACCCAAGCTGGTGGGCAGGGGGCTGGAAGGCA...GGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TACAGCTGCCTGCCTGCCAGAGGCCAAGCATTCCTAAGCGTGGGCTGGGGGAGGACCTTATCTCAGTTATaGCATTTTGGCGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: YSCLPARGQAFLSVGWGRTLSQL*HFGVHS
Trigger: ACTGTGGACGCCAAAATGGCATAACTGAGATAAGGT...CCTCCCCCAGCCCACGCTTAGGAATGCTTGGCCTCTGGCAGGCAGGCAGCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AGCCCATGCACCCCGAACCTGACTTCACTACCAACCTTGAGCCTGTGCTGTCCTCCTTGTCTGTGCGTGTaGCCAGCAGATGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SPCTPNLTSLPTLSLCCPPCLCV*PADGKV
Trigger: CACTTTTCCATCTGCTGGCCACACGCACAGACAAGG...AGGACAGCACAGGCTCAAGGTTGGTAGTGAAGTCAGGTTCGGGGTGCATGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTATGTATACAACTGCATaGACCGGGTCTTCTAACACG +
Preference number: 4 (lower is better)
Translates to: STRHDESSPSEALLEQLPMYTTA*TGSSNT
Trigger: CGTGTTAGAAGACCCGGTCCATGCAGTTGTATACAT...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp TGGCAGAATCTGGACAAACGGACATCACTGCAAGGGTCTGTCCACCTAGCTTGGCTTCCGAGGCGCTTCTaGAGCAGCTTCCTCAACCTG +
Preference number: 4 (lower is better)
Translates to: WQNLDKRTSLQGSVHLAWLPRRF*SSFLNL
Trigger: CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAG...CCAAGCTAGGTGGACAGACCCTTGCAGTGATGTCCGTTTGTCCAGATTCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTACGTATAGAAGAGCTTaGTGGGATAGGTGTTGTACT +
Preference number: 4 (lower is better)
Translates to: STRHDESSPSEALLEQLPTYRRA*WDRCCT
Trigger: AGTACAACACCTATCCCATCAAGCTCTTCTATACGT...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR TCA 90 bp TGGCAGAATCTGGACAAACGGACATCACTGCAAGGGTCTGTCCACCTAGCTTGGGCCACTGAAGCGAGCTaGGAGCATTTGGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: WQNLDKRTSLQGSVHLAWATEAS*EHLGDD
Trigger: GTCATCTCCCAAATGCTCTCAGCTCGCTTCAGTGGC...CCAAGCTAGGTGGACAGACCCTTGCAGTGATGTCCGTTTGTCCAGATTCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGCCAGCAAGTTGCCACTaGAGCGAGCTGAGAGCATTT +
Preference number: 4 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPPASCH*SELRAF
Trigger: AAATGCTCTCAGCTCGCTTCAGTGGCAACTTGCTGG...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR TCA 90 bp CATCTTGGTTCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTTTGTGGGGAAACAGGTaGGACGGCTGCAGCCGCATA +
Preference number: 4 (lower is better)
Translates to: HLGSAAELLGGFRQVPSCLWGNR*DGCSRI
Trigger: TATGCGGCTGCAGCCGTCTCACCTGTTTCCCCACAA...ACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGCTTCACTACCAACCTTaGGCCTGTGCTGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPLHYQP*ACAVLS
Trigger: AGAGAGGACAGCACAGGCTCAAGGTTGGTAGTGAAG...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCAGCAGATGGAAAAGTaGGATGATAGCACCTTCAAA +
Preference number: 4 (lower is better)
Translates to: KSICRSSTRHDESSPSEAQQMEK*DDSTFK
Trigger: TTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTG...CGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp AGCCCATGCACCCCGAACCTGACTTCACTACCAACCTTGAGCCTGTGCTGTCCTCCTCTCATCACCATCTaGTGCTCCTTCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SPCTPNLTSLPTLSLCCPPLITI*CSFSCF
Trigger: AAAGCAGCTGAAGGAGCAGCAGATGGTGATGAGAGG...AGGACAGCACAGGCTCAAGGTTGGTAGTGAAGTCAGGTTCGGGGTGCATGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TCCCACGTCTCCGGGAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAGTAGATGATTGTGACTaGGAGCAGGATCCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: SHVSGKYMICSQLHTLLPVDDCD*EQDPGS
Trigger: GGAACCGGGATCCTGCTCGCAGTCACAATCATCTAC...TGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGACGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TGGCAGAATCTGGACAAACGGACATCACTGCAAGGGTCTGTCCACCTAGCTTGGCCAACCTTGAGCCTGTaGTGTCCTCTCTCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: WQNLDKRTSLQGSVHLAWPTLSL*CPLSAD
Trigger: GTCAGCAGAGAGAGGACAGCACAGGCTCAAGGTTGG...CCAAGCTAGGTGGACAGACCCTTGCAGTGATGTCCGTTTGTCCAGATTCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCCGATGGTTACAGGCTaGAGGCGGGACTATGGGGCT +
Preference number: 4 (lower is better)
Translates to: NIIKSPYAAAARAMMRAPPMVTG*RRDYGA
Trigger: AGCCCCATAGTCCCGCCTGCAGCCTGTAACCATCGG...GGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTGGTCCCTTGTCTGTGCGTGTaGCCAGCAGATGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SAAELLGGFRQVPSCPLVPCLCV*PADGKV
Trigger: CACTTTTCCATCTGCTGGCCACACGCACAGACAAGG...GACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TCCTTGGTCCCACCAATGTCTAAAGCCAGCTCGAAACCTCGAGCTCCTCAGGATATGGAGGTCTCTCGGTaGCCTCTCATCACCATCTGC +
Preference number: 4 (lower is better)
Translates to: SLVPPMSKASSKPRAPQDMEVSR*PLITIC
Trigger: GCAGATGGTGATGAGAGGCCACCGAGAGACCTCCAT...ATCCTGAGGAGCTCGAGGTTTCGAGCTGGCTTTAGACATTGGTGGGACCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGTACCGGTTGAGTTCATaGACCATGGAGGTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPYRLSS*TMEVSR
Trigger: CCGAGAGACCTCCATGGTCCATGAACTCAACCGGTA...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp CTGGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCCAGAGAGAGGGTGCTAATTCTGAACACAGCTaGGTGATCTTCAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LGSACPKRGLPKGQREGANSEHS*VIFSPE
Trigger: TTCTGGGCTGAAGATCACCCAGCTGTGTTCAGAATT...AGCACCCTCTCTCTGGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TCCCACGTCTCCGGGAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCACAGAAAGGAAGTCGGTaGTGTCTGCTCACTTGCGTG +
Preference number: 4 (lower is better)
Translates to: SHVSGKYMICSQLHTLLPQKGSR*CLLTCV
Trigger: CACGCAAGTGAGCAGACACCACCGACTTCCTTTCTG...TGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGACGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp GAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAAAATGAAACGTAGACCCTCTGCCGGGCTGTaGCGGTGGCCCTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: EIHDLLPASHPTAKMKRRPSAGL*RWPCAL
Trigger: CAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGG...TCTACGTTTCATTTTGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TGGCAGAATCTGGACAAACGGACATCACTGCAAGGGTCTGTCCACCTAGCTTGGGGTCACTCTGTTTCCTaGCTAGCACTGCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: WQNLDKRTSLQGSVHLAWGHSVS*LALPAR
Trigger: CCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACC...CCAAGCTAGGTGGACAGACCCTTGCAGTGATGTCCGTTTGTCCAGATTCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp GAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAAAATGAAACGTAGAGCTCCTCCTGAGGCCTaGTGCCTTCCAGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: EIHDLLPASHPTAKMKRRAPPEA*CLPAPC
Trigger: GCAGGGGGCTGGAAGGCACCAGGCCTCAGGAGGAGC...TCTACGTTTCATTTTGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTGCAGGGCCCAGCCGATaGTTACAGGCTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: KNIIKSPYAAAARAMMRAAGPSR*LQAAGG
Trigger: CCCGCCTGCAGCCTGTAACCATCGGCTGGGCCCTGC...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp AGCCCATGCACCCCGAACCTGACTTCACTACCAACCTTGAGCCTGTGCTGTCCTAGCCGCATACAGCACTaGGAAGGTGCAAAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: SPCTPNLTSLPTLSLCCPSRIQH*EGAKVK
Trigger: TTTAACCTTTGCACCTTCTCAGTGCTGTATGCGGCT...AGGACAGCACAGGCTCAAGGTTGGTAGTGAAGTCAGGTTCGGGGTGCATGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp TCCCACGTCTCCGGGAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCATCTCCGGGAAATACATaGTCTGCTCCCAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: SHVSGKYMICSQLHTLLPSPGNT*SAPSFT
Trigger: TGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGA...TGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGACGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp TGGCAGAATCTGGACAAACGGACATCACTGCAAGGGTCTGTCCACCTAGCTTGGAAACACTGGAGCAACTaGTCAACACCACCACAGCCC +
Preference number: 4 (lower is better)
Translates to: WQNLDKRTSLQGSVHLAWKHWSN*STPPQP
Trigger: GGGCTGTGGTGGTGTTGATCAGTTGCTCCAGTGTTT...CCAAGCTAGGTGGACAGACCCTTGCAGTGATGTCCGTTTGTCCAGATTCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp GAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAAAATGAAACGTAGACTATGGGGCTCCTCCTaGGGCCTGGTGCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EIHDLLPASHPTAKMKRRLWGSS*GLVPSS
Trigger: GCTGGAAGGCACCAGGCCTCAGGAGGAGCCCCATAG...TCTACGTTTCATTTTGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp ATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTTTTTGGCGTCCACAGTaGCAGTCCCCTGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IIKSPYAAAARAMMRAPLFWRPQ*QSPGSW
Trigger: CCAGCTTCCAGGGGACTGTCACTGTGGACGCCAAAA...AAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp GAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAAAATGAAACGTAGACCCAGCGCGTTCCACTaGACAGCAGCTCCGCCGAGA +
Preference number: 4 (lower is better)
Translates to: EIHDLLPASHPTAKMKRRPSAFH*TAAPPR
Trigger: TCTCGGCGGAGCTGCTGTGCAGTGGAACGCGCTGGG...TCTACGTTTCATTTTGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243253.8
CDS-3UTR GCA 90 bp ATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCTTAGCACCCAACTCTaGTGCCCTTGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: IIKSPYAAAARAMMRAPLLSTQL*CPCCWA
Trigger: TGCCCAGCAGCAAGGGCAGCAGAGTTGGGTGCTAAG...AAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTGTGGCGGTGGCCCTGTaGTTTGCAGGCTGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: KNIIKSPYAAAARAMMRAVAVAL*FAGCRV
Trigger: CACACGGCAGCCTGCAAAGCACAGGGCCACCGCCAC...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTaGAGCAGCTTCCTCAACCTG +
Preference number: 4 (lower is better)
Translates to: NIIKSPYAAAARAMMRAPLPRRF*SSFLNL
Trigger: CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAG...GGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp AAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGAGTTACATGGACACTTaGGGACAATCCTATACCATT +
Preference number: 4 (lower is better)
Translates to: KSICRSSTRHDESSPSEASYMDT*GQSYTI
Trigger: AATGGTATAGGATTGTCCCCAAGTGTCCATGTAACT...CGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TCCCACGTCTCCGGGAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAGTGTCCAGTGATGACTaGCAGAATCTGGACAAACGG +
Preference number: 4 (lower is better)
Translates to: SHVSGKYMICSQLHTLLPVSSDD*QNLDKR
Trigger: CCGTTTGTCCAGATTCTGCCAGTCATCACTGGACAC...TGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGACGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp ATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTGCCACTGAAGCGAGCTaGGAGCATTTGGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: IIKSPYAAAARAMMRAPLATEAS*EHLGDD
Trigger: GTCATCTCCCAAATGCTCTCAGCTCGCTTCAGTGGC...AAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp TCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTGGTCAGTAGTGGGGCTGAATaGCTTCCATACGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: SAAELLGGFRQVPSCPLVSSGAE*LPYDGF
Trigger: GAAACCATCGTATGGAAGGCATTCAGCCCCACTACT...GACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGCGTTTTGGAGAAGAATaGACAGGAGCCCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPRFGEE*TGAQHE
Trigger: TTCATGCTGGGCTCCTGTGCATTCTTCTCCAAAACG...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp TCCCACGTCTCCGGGAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCATGCTGCTCCTTCAGCTaGTTTGCAACATCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SHVSGKYMICSQLHTLLPCCSFS*FATSLA
Trigger: TGCCAAAGATGTTGCAAAGCAGCTGAAGGAGCAGCA...TGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGACGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTGGTCTGCTGCTCCTTCAGCTaGTTTGCAACATCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SAAELLGGFRQVPSCPLVCCSFS*FATSLA
Trigger: TGCCAAAGATGTTGCAAAGCAGCTGAAGGAGCAGCA...GACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TCCCACGTCTCCGGGAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCACTGCCAACCTCGCTTTaGTCCTTAACGAAGATCTCA +
Preference number: 4 (lower is better)
Translates to: SHVSGKYMICSQLHTLLPLPTSL*SLTKIS
Trigger: TGAGATCTTCGTTAAGGAGCAAAGCGAGGTTGGCAG...TGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGACGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp ATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTGAAGTCGGTGGTGTCTaGTCACTTGCGTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: IIKSPYAAAARAMMRAPLEVGGV*SLACSP
Trigger: AGGACTGCACGCAAGTGAGCAGACACCACCGACTTC...AAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTTGCCTTCCAGCCCCCTaGCCACCAGCTTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: KNIIKSPYAAAARAMMRACLPAP*PPAWVQ
Trigger: CTGTACCCAAGCTGGTGGGCAGGGGGCTGGAAGGCA...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TCCTTGGTCCCACCAATGTCTAAAGCCAGCTCGAAACCTCGAGCTCCTCAGGATAGACAAATCCACAGATaGCCAGGAGTGTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLVPPMSKASSKPRAPQDRQIHR*PGVSSG
Trigger: CCCAGAAGACACTCCTGGCCATCTGTGGATTTGTCT...ATCCTGAGGAGCTCGAGGTTTCGAGCTGGCTTTAGACATTGGTGGGACCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGCAAAGAGCTGAATGGTaGTTAGCAGGCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPQRAEW*LAGKFQ
Trigger: CTGGAATTTGCCTGCTAATCACCATTCAGCTCTTTG...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR TCA 90 bp AACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCCAGCAAGTTGCCACTaGAGCGAGCTGAGAGCATTT +
Preference number: 4 (lower is better)
Translates to: NIIKSPYAAAARAMMRAPPASCH*SELRAF
Trigger: AAATGCTCTCAGCTCGCTTCAGTGGCAACTTGCTGG...GGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR TCA 90 bp TGGCAGAATCTGGACAAACGGACATCACTGCAAGGGTCTGTCCACCTAGCTTGGCACAGGAGCCCAGCATaGACACTATGTATACAACTG +
Preference number: 4 (lower is better)
Translates to: WQNLDKRTSLQGSVHLAWHRSPA*TLCIQL
Trigger: CAGTTGTATACATAGTGTTCATGCTGGGCTCCTGTG...CCAAGCTAGGTGGACAGACCCTTGCAGTGATGTCCGTTTGTCCAGATTCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp CAGCTTGGCAGAGCTGATGACCCAAGTGGACTAAACACGGAGCTAGCAGAAACATCTCCGGGAAATACATaGTCTGCTCCCAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: QLGRADDPSGLNTELAETSPGNT*SAPSFT
Trigger: TGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGA...TGTTTCTGCTAGCTCCGTGTTTAGTCCACTTGGGTCATCAGCTCTGCCAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AGCCCATGCACCCCGAACCTGACTTCACTACCAACCTTGAGCCTGTGCTGTCCTCAGCAGATGGAAAAGTaGGATGATAGCACCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SPCTPNLTSLPTLSLCCPQQMEK*DDSTFK
Trigger: TTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTG...AGGACAGCACAGGCTCAAGGTTGGTAGTGAAGTCAGGTTCGGGGTGCATGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCGTAGATGATTGTGACTaGGAGCAGGATCCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: NIIKSPYAAAARAMMRAPVDDCD*EQDPGS
Trigger: GGAACCGGGATCCTGCTCGCAGTCACAATCATCTAC...GGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTAGAGCAGGGCCCCCATaGTGCCAACCTCGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: KNIIKSPYAAAARAMMRARAGPP*CQPRFA
Trigger: AGCAAAGCGAGGTTGGCAGCATGGGGGCCCTGCTCT...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp CTGGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCCAGAGAGAGGGTGCTTTTCACAGTTCTTTTTaGCAGTGCCAGGATAAAAAG +
Preference number: 4 (lower is better)
Translates to: LGSACPKRGLPKGQREGAFHSSF*QCQDKK
Trigger: CTTTTTATCCTGGCACTGGCAAAAAGAACTGTGAAA...AGCACCCTCTCTCTGGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TCCCACGTCTCCGGGAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCACCAAACAGGGGAATCTaGCAGCACACTAAGAAGATA +
Preference number: 4 (lower is better)
Translates to: SHVSGKYMICSQLHTLLPPNRGI*QHTKKI
Trigger: TATCTTCTTAGTGTGCTGCCAGATTCCCCTGTTTGG...TGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTCCCGGAGACGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243253.8
CDS-3UTR CCA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGCCAAACAGGGGAATCTaGCAGCACACTAAGAAGATA +
Preference number: 4 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPPNRGI*QHTKKI
Trigger: TATCTTCTTAGTGTGCTGCCAGATTCCCCTGTTTGG...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000464451.5
CDS-3UTR CCA 90 bp ATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCTTGTCTGTGCGTGTaGCCAGCAGATGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: IIKSPYAAAARAMMRAPLPCLCV*PADGKV
Trigger: CACTTTTCCATCTGCTGGCCACACGCACAGACAAGG...AAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp AACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCTTGAGGAGACTGTTGTaGGCAAAGCATGGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: NIIKSPYAAAARAMMRAPLRRLL*AKHGGV
Trigger: CACACCGCCATGCTTTGCCCACAACAGTCTCCTCAA...GGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR TCA 90 bp CATCTTGGTTCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCACAGGAGCCCAGCATaGACACTATGTATACAACTG +
Preference number: 4 (lower is better)
Translates to: HLGSAAELLGGFRQVPSCHRSPA*TLCIQL
Trigger: CAGTTGTATACATAGTGTTCATGCTGGGCTCCTGTG...ACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp AACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCTGCTTCCAACCAGAGTaGGAAATTCCCTTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: NIIKSPYAAAARAMMRAPCFQPE*EIPFVG
Trigger: CCCCACAAAGGGAATTTCTCACTCTGGTTGGAAGCA...GGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGACCCTACTGCCAAAATaGAACGTAGACATTTCAGTG +
Preference number: 4 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPTLLPK*NVDISV
Trigger: CACTGAAATGTCTACGTTTCATTTTGGCAGTAGGGT...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp CATCTTGGTTCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCTGCCAACCTCGCTTTaGTCCTTAACGAAGATCTCA +
Preference number: 4 (lower is better)
Translates to: HLGSAAELLGGFRQVPSCLPTSL*SLTKIS
Trigger: TGAGATCTTCGTTAAGGAGCAAAGCGAGGTTGGCAG...ACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp ATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTGTCTGCTCACTTGCGTaGAGTCCTAAGCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: IIKSPYAAAARAMMRAPLVCSLA*SPKHSK
Trigger: CTTACTGTGCTTAGGACTGCACGCAAGTGAGCAGAC...AAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp GAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAAAATGAAACGTAGACACCACCACAGCCCATaGACCCCGAACCTGACTTCA +
Preference number: 4 (lower is better)
Translates to: EIHDLLPASHPTAKMKRRHHHSP*TPNLTS
Trigger: TGAAGTCAGGTTCGGGGTGCATGGGCTGTGGTGGTG...TCTACGTTTCATTTTGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp CATCTTGGTTCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCTGAATCTTCCTCTCTaGCTTCTGAATTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: HLGSAAELLGGFRQVPSCLNLPL*LLNFRQ
Trigger: CTGCCGGAAATTCAGAAGCCAGAGAGGAAGATTCAG...ACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243253.8
CDS-3UTR CCA 90 bp CATCTTGGTTCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTGGAGCCAAAAGATTCTaGAGGGGACAGGTAATAGCA +
Preference number: 4 (lower is better)
Translates to: HLGSAAELLGGFRQVPSCGAKRF*RGQVIA
Trigger: TGCTATTACCTGTCCCCTCCAGAATCTTTTGGCTCC...ACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp TCCTTGGTCCCACCAATGTCTAAAGCCAGCTCGAAACCTCGAGCTCCTCAGGATATGTATACAACTGCATaGACCGGGTCTTCTAACACG +
Preference number: 4 (lower is better)
Translates to: SLVPPMSKASSKPRAPQDMYTTA*TGSSNT
Trigger: CGTGTTAGAAGACCCGGTCCATGCAGTTGTATACAT...ATCCTGAGGAGCTCGAGGTTTCGAGCTGGCTTTAGACATTGGTGGGACCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTGGCTTGTCGTGGGTGTaGGTCCCCTTCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: KNIIKSPYAAAARAMMRAGLSWV*VPFHLR
Trigger: TCTCAGATGGAAGGGGACCCACACCCACGACAAGCC...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR TCA 90 bp CATCTTGGTTCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCAAAGAGCTGAATGGTaGTTAGCAGGCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: HLGSAAELLGGFRQVPSCQRAEW*LAGKFQ
Trigger: CTGGAATTTGCCTGCTAATCACCATTCAGCTCTTTG...ACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp ATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCACAGGAGCCCAGCATaGACACTATGTATACAACTG +
Preference number: 4 (lower is better)
Translates to: IIKSPYAAAARAMMRAPLHRSPA*TLCIQL
Trigger: CAGTTGTATACATAGTGTTCATGCTGGGCTCCTGTG...AAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp TCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTGGTCAGGCCATATCCTTTTTaGAGGAGTTCATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: SAAELLGGFRQVPSCPLVRPYPF*RSSSKS
Trigger: ACTTTTGGATGAACTCCTGCAAAAAGGATATGGCCT...GACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCCATATCCTTTTTaGAGGAGTTCATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPRPYPF*RSSSKS
Trigger: ACTTTTGGATGAACTCCTGCAAAAAGGATATGGCCT...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp AACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCGTTTTGGAGAAGAATaGACAGGAGCCCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: NIIKSPYAAAARAMMRAPRFGEE*TGAQHE
Trigger: TTCATGCTGGGCTCCTGTGCATTCTTCTCCAAAACG...GGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp TCCTTGGTCCCACCAATGTCTAAAGCCAGCTCGAAACCTCGAGCTCCTCAGGATACCTTATCTCAGTTATaGCATTTTGGCGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: SLVPPMSKASSKPRAPQDTLSQL*HFGVHS
Trigger: ACTGTGGACGCCAAAATGGCATAACTGAGATAAGGT...ATCCTGAGGAGCTCGAGGTTTCGAGCTGGCTTTAGACATTGGTGGGACCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCGGAGCCAAAAGATTCTaGAGGGGACAGGTAATAGCA +
Preference number: 4 (lower is better)
Translates to: NIIKSPYAAAARAMMRAPGAKRF*RGQVIA
Trigger: TGCTATTACCTGTCCCCTCCAGAATCTTTTGGCTCC...GGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGTTACATGGACACTTaGGGACAATCCTATACCATT +
Preference number: 4 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPSYMDT*GQSYTI
Trigger: AATGGTATAGGATTGTCCCCAAGTGTCCATGTAACT...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp CATCTTGGTTCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCTGCAAAACATCCTTaGTCCCACCAATGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: HLGSAAELLGGFRQVPSCPAKHP*SHQCLK
Trigger: CTTTAGACATTGGTGGGACCAAGGATGTTTTGCAGG...ACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTAGTGGGAGAACCATGTaGGTAGGAGGGCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: KNIIKSPYAAAARAMMRASGRTM*VGGHQV
Trigger: GACCTGATGCCCTCCTACCCACATGGTTCTCCCACT...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
3UTR CAA 72 bp TTTGTCACTTATTCACCTTATCTCAGTTATGCCATTTaGGCGTCCACAGTGACAGTCCCCTGGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FVTYSPYLSYAI*ASTVTVPWKLG
Trigger: CCCCAGCTTCCAGGGGACTGTCACTGTGGACGCCAAAATGGCATAACTGAGATAAGGTGAATAAGTGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp GAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAAAATGAAACGTAGACTTCACTACCAACCTTaGGCCTGTGCTGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: EIHDLLPASHPTAKMKRRLHYQP*ACAVLS
Trigger: AGAGAGGACAGCACAGGCTCAAGGTTGGTAGTGAAG...TCTACGTTTCATTTTGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp TTCAGTGTTTGTGCTTCCAACCAGAGTGAGAAATTCCCTTTGTGGGGAAACAGGAGGATCAGGGCATCCTaGAAAACATCCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: FSVCASNQSEKFPLWGNRRIRAS*KTSLVP
Trigger: TGGGACCAAGGATGTTTTGCAGGATGCCCTGATCCT...CCTGTTTCCCCACAAAGGGAATTTCTCACTCTGGTTGGAAGCACAAACACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTAGGTGTAGGGGCTTGTaGGCACTAAGTCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: KNIIKSPYAAAARAMMRARCRGL*ALSQFL
Trigger: CAGAAACTGACTTAGTGCTCACAAGCCCCTACACCT...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp ATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCAGCAGATGGAAAAGTaGGATGATAGCACCTTCAAA +
Preference number: 4 (lower is better)
Translates to: IIKSPYAAAARAMMRAPLQQMEK*DDSTFK
Trigger: TTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTG...AAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTGTCTGCTCACTTGCGTaGAGTCCTAAGCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: KNIIKSPYAAAARAMMRAVCSLA*SPKHSK
Trigger: CTTACTGTGCTTAGGACTGCACGCAAGTGAGCAGAC...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCGTGTGGCCAGCAGATaGAAAAGTGCGATGATAGCA +
Preference number: 4 (lower is better)
Translates to: KNIIKSPYAAAARAMMRARVASR*KSAMIA
Trigger: TGCTATCATCGCACTTTTCCATCTGCTGGCCACACG...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR TCA 90 bp TTCAGTGTTTGTGCTTCCAACCAGAGTGAGAAATTCCCTTTGTGGGGAAACAGGCAAAGAGCTGAATGGTaGTTAGCAGGCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: FSVCASNQSEKFPLWGNRQRAEW*LAGKFQ
Trigger: CTGGAATTTGCCTGCTAATCACCATTCAGCTCTTTG...CCTGTTTCCCCACAAAGGGAATTTCTCACTCTGGTTGGAAGCACAAACACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTAGCCGCATACAGCACTaGGAAGGTGCAAAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: KNIIKSPYAAAARAMMRASRIQH*EGAKVK
Trigger: TTTAACCTTTGCACCTTCTCAGTGCTGTATGCGGCT...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR GCA 90 bp AACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCAGGCCATATCCTTTTTaGAGGAGTTCATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: NIIKSPYAAAARAMMRAPRPYPF*RSSSKS
Trigger: ACTTTTGGATGAACTCCTGCAAAAAGGATATGGCCT...GGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR GCA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCTGCCAACCTCGCTTTaGTCCTTAACGAAGATCTCA +
Preference number: 4 (lower is better)
Translates to: KNIIKSPYAAAARAMMRALPTSL*SLTKIS
Trigger: TGAGATCTTCGTTAAGGAGCAAAGCGAGGTTGGCAG...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CCA 90 bp TTCAGTGTTTGTGCTTCCAACCAGAGTGAGAAATTCCCTTTGTGGGGAAACAGGCAAATACTTCCTCTCTaGCTTCTGAATTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: FSVCASNQSEKFPLWGNRQILPL*LLNFRQ
Trigger: CTGCCGGAAATTCAGAAGCCAGAGAGGAAGTATTTG...CCTGTTTCCCCACAAAGGGAATTTCTCACTCTGGTTGGAAGCACAAACACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424880.2
CDS-3UTR GCA 90 bp ATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTTTTCACAGTTCTTTTTaGCAGTGCCAGGATAAAAAG +
Preference number: 4 (lower is better)
Translates to: IIKSPYAAAARAMMRAPLFHSSF*QCQDKK
Trigger: CTTTTTATCCTGGCACTGGCAAAAAGAACTGTGAAA...AAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CCA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCTGCAAAACATCCTTaGTCCCACCAATGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: KNIIKSPYAAAARAMMRAPAKHP*SHQCLK
Trigger: CTTTAGACATTGGTGGGACCAAGGATGTTTTGCAGG...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR TCA 90 bp GAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAAAATGAAACGTAGAACCCTACTGCCAAAATaGAACGTAGACATTTCAGTG +
Preference number: 4 (lower is better)
Translates to: EIHDLLPASHPTAKMKRRTLLPK*NVDISV
Trigger: CACTGAAATGTCTACGTTTCATTTTGGCAGTAGGGT...TCTACGTTTCATTTTGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS CCA 90 bp GGGGGCCGGTCAGGGTTGGCCGGCGGGCGCCCGACCGCACGGGTGTaGGGAAGGGGGATCTGTTCCGTCCCGGCCTCAATAGGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: GGRSGLAGGRPTARV*GRGICSVPASIGLP
Trigger: GGGAAGCCCTATTGAGGCCGGGACGGAACAGATCCCCCTTCCCCACACCCGTGCGGTCGGGCGCCCGCCGGCCAACCCTGACCGGCCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491668.1
CDS-3UTR CAA 90 bp TCTCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCCCCTGCCCACCAGCTaGGGTACAGCTGCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SPECAPLPGCGGGPVLCRPLPTS*GTAACL
Trigger: CAGGCAGGCAGCTGTACCCAAGCTGGTGGGCAGGGG...CCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp GCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCCGGTGGCCCTGTGCTTaGCAGGCTGCCGTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: ARAMMRAPLPRRFWSSFLRWPCA*QAAVCP
Trigger: TGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCG...GAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp AGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGCCCCTGCCCACCAGCTaGGGTACAGCTGCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SSPSEALLEQLPQPVRETPLPTS*GTAACL
Trigger: CAGGCAGGCAGCTGTACCCAAGCTGGTGGGCAGGGG...CGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp TCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTCCACAATGTCTCCCCTaGCTAGGGCAGCTGCGAGGA +
Preference number: 5 (lower is better)
Translates to: SRVCPSAGLWRWPCALQAPQCLP*LGQLRG
Trigger: TCCTCGCAGCTGCCCTAGCAAGGGGAGACATTGTGG...AGCCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS CCA 90 bp GCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTaGAGCAGCTTCCTCAACCTGTCCGGGAGACGGGCTCAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: AAARAMMRAPLPRRF*SSFLNLSGRRAQKS
Trigger: GCTCTTCTGAGCCCGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
ENST00000483956.1
ENST00000498837.1
CDS-3UTR CAA 90 bp ATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGCGAAGGGCTCGGACCTaGTCTGTGCGTGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: MRAPLPRRFWSSFLNLSGRRART*SVRVAS
Trigger: GCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCG...CCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCGAAGGGCTCGGACCTaGTCTGTGCGTGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: STRHDESSPSEALLEQLPRRART*SVRVAS
Trigger: GCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCG...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp GCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCAGTTTCTGGAGAGACTaGGCCGGAGAAGGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: AARAMMRAPLPRRFWSSFSFWRD*AGEGPG
Trigger: CCCCGGCCCTTCTCCGGCCAAGTCTCTCCAGAAACT...GAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR CAA 90 bp AAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGAGCAAACCCGGAGGCTaGTCGTGGGTGTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: KSICRSSTRHDESSPSEASKPGG*SWVWVP
Trigger: GGGGACCCACACCCACGACAAGCCTCCGGGTTTGCT...CGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR CAA 90 bp TCTCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGGTGGGGATGTACCGGTaGAGTTCATGGACCATGGAG +
Preference number: 5 (lower is better)
Translates to: SPECAPLPGCGGGPVLCRVGMYR*SSWTME
Trigger: CTCCATGGTCCATGAACTCAACCGGTACATCCCCAC...CCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp TACAGCTGCCTGCCTGCCAGAGGCCAAGCATTCCTAAGCGTGGGCTGGGGGAGGGTCTGTCCACCTAGCTaGGCCAGGCTCAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: YSCLPARGQAFLSVGWGRVCPPS*ARLSLA
Trigger: TGCCAAGCTGAGCCTGGCCAAGCTAGGTGGACAGAC...CCTCCCCCAGCCCACGCTTAGGAATGCTTGGCCTCTGGCAGGCAGGCAGCTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp GCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCGTCTGTCCACCTAGCTaGGCCAGGCTCAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: AARAMMRAPLPRRFWSSFVCPPS*ARLSLA
Trigger: TGCCAAGCTGAGCCTGGCCAAGCTAGGTGGACAGAC...GAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp CTGGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCCAGAGAGAGGGTGCTCCAACTCTGCTGCCCTaGCTGCTGGGCAGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: LGSACPKRGLPKGQREGAPTLLP*LLGSAC
Trigger: ACAGGCACTGCCCAGCAGCAAGGGCAGCAGAGTTGG...AGCACCCTCTCTCTGGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp CTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGGGGTCCCTTCTTGTCCCTaGGTCACTCTGTTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: LPFRGASGAASSTCPGDGVPSCP*VTLFPG
Trigger: GCCAGGAAACAGAGTGACCAAGGGACAAGAAGGGAC...CCCGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS GCA 90 bp TGGAGGGGACAGGTAATAGCAAAGGCCACCAACTGGATAAGCACGTaGTGGGCCCCCAGAAGACGTGTCCGACCAGGTGCCCAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: WRGQVIAKATNWIST*WAPRRRVRPGAQQA
Trigger: AGCCTGCTGGGCACCTGGTCGGACACGTCTTCTGGGGGCCCAGCACGTGCTTATCCAGTTGGTGGCCTTTGCTATTACCTGTCCCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
ENST00000483956.1
CDS CCA 90 bp CGGAGGCTTGTCGTGGGTGTGGGTCCCCTTCCATCTGAGAACGAATaGGATGAGTTTCTGGAGAGACTTGGCCGGAGAAGGGCCGGGGCA +
Preference number: 5 (lower is better)
Translates to: RRLVVGVGPLPSENE*DEFLERLGRRRAGA
Trigger: TGCCCCGGCCCTTCTCCGGCCAAGTCTCTCCAGAAACTCATCCCATTCGTTCTCAGATGGAAGGGGACCCACACCCACGACAAGCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR CAA 90 bp CGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACAGGCTGACCAGCAAGTaGCCACTGAAGCGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: RAMMRAPLPRRFWSSFLNRLTSK*PLKRAE
Trigger: CTCAGCTCGCTTCAGTGGCAACTTGCTGGTCAGCCT...GTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp ATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGGCTGACCAGCAAGTaGCCACTGAAGCGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: MRAPLPRRFWSSFLNLSGRLTSK*PLKRAE
Trigger: CTCAGCTCGCTTCAGTGGCAACTTGCTGGTCAGCCT...CCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp GCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCGTGGGGATGTACCGGTaGAGTTCATGGACCATGGAG +
Preference number: 5 (lower is better)
Translates to: AARAMMRAPLPRRFWSSFVGMYR*SSWTME
Trigger: CTCCATGGTCCATGAACTCAACCGGTACATCCCCAC...GAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp TCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTCCCTTGGTCCGGTGGCCCTGTGCTTaGCAGGCTGCCGTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: SAAELLGGFRQVPSCPLVRWPCA*QAAVCP
Trigger: TGGGCACACGGCAGCCTGCAAAGCACAGGGCCACCG...GACCAAGGGACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp TCTCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGCTCAGTTATGCCATTTaGGCGTCCACAGTGACAGTC +
Preference number: 5 (lower is better)
Translates to: SPECAPLPGCGGGPVLCRLSYAI*ASTVTV
Trigger: GACTGTCACTGTGGACGCCAAAATGGCATAACTGAG...CCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp CTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGTCCGGGAGACGGGCCTTTGTGCCGAGCCTaGATAGATTCTGGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: LPFRGASGAASSTCPGDGPLCRA*IDSGEK
Trigger: CTTCTCGCCAGAATCTATCAAGGCTCGGCACAAAGG...CCCGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR CAA 90 bp CGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACGTGGTGTCTGCTCACTaGCGTGCAGTCCTAAGCACA +
Preference number: 5 (lower is better)
Translates to: RAMMRAPLPRRFWSSFLNVVSAH*RAVLST
Trigger: TGTGCTTAGGACTGCACGCAAGTGAGCAGACACCAC...GTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTGGTTCTGCTGCTGAGTaGCTGGGTGGCTTTAGGCAA +
Preference number: 5 (lower is better)
Translates to: STRHDESSPSEALLEQLPGSAAE*LGGFRQ
Trigger: TTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACC...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp GCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCCCTGGGAGAGTACCTTaGTGCCGAGCCTTGATAGAT +
Preference number: 5 (lower is better)
Translates to: ARAMMRAPLPRRFWSSFLPGRVP*CRALID
Trigger: ATCTATCAAGGCTCGGCACAAAGGTACTCTCCCAGG...GAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR CAA 90 bp TACAGCTGCCTGCCTGCCAGAGGCCAAGCATTCCTAAGCGTGGGCTGGGGGAGGATGACTTCCAGAAATTaGATTGCCATGGCGGCGGCT +
Preference number: 5 (lower is better)
Translates to: YSCLPARGQAFLSVGWGRMTSRN*IAMAAA
Trigger: AGCCGCCGCCATGGCAATCAAATTTCTGGAAGTCAT...CCTCCCCCAGCCCACGCTTAGGAATGCTTGGCCTCTGGCAGGCAGGCAGCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243253.8
CDS-3UTR CAA 90 bp GCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCTGCTTTGCAACATCTTaGGCAGAGGAACCTGAGACC +
Preference number: 5 (lower is better)
Translates to: AARAMMRAPLPRRFWSSFCFATS*AEEPET
Trigger: GGTCTCAGGTTCCTCTGCCAAAGATGTTGCAAAGCA...GAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp AGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTGCTGCCAACCTCGCTTaGCTCCTTAACGAAGATCTC +
Preference number: 5 (lower is better)
Translates to: STRHDESSPSEALLEQLPAANLA*LLNEDL
Trigger: GAGATCTTCGTTAAGGAGCAAAGCGAGGTTGGCAGC...AGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp TCTCCAGAGTGTGCCCCTCTGCCGGGCTGTGGCGGTGGCCCTGTGCTTTGCAGGAGCCATCCCTCTCTTTaGGAAGAAGTTCTGTCCTTA +
Preference number: 5 (lower is better)
Translates to: SPECAPLPGCGGGPVLCRSHPSL*EEVLSL
Trigger: TAAGGACAGAACTTCTTCCAAAAGAGAGGGATGGCT...CCTGCAAAGCACAGGGCCACCGCCACAGCCCGGCAGAGGGGCACACTCTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp GCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGGCTCCTTCAGCTGCTTaGCAACATCTTTGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: AMMRAPLPRRFWSSFLNLAPSAA*QHLWQR
Trigger: CCTCTGCCAAAGATGTTGCAAAGCAGCTGAAGGAGC...CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp CTTGTCCCTTGGTCACTCTGTTTCCTGGCTAGCACTGCCAGCAAGGTCTCCAGACCACAATGTCTCCCCTaGCTAGGGCAGCTGCGAGGA +
Preference number: 5 (lower is better)
Translates to: LVPWSLCFLASTASKVSRPQCLP*LGQLRG
Trigger: TCCTCGCAGCTGCCCTAGCAAGGGGAGACATTGTGG...TCTGGAGACCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACCAAGGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp GCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAACCTGACTTCACTACCAACCTaGAGCCTGTGCTGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: AMMRAPLPRRFWSSFLNLTSLPT*SLCCPL
Trigger: GAGAGGACAGCACAGGCTCAAGGTTGGTAGTGAAGT...CAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp TGCTCAGGACTGGGTCTAGACAAGGCCACGTGTGATAGGGTGGTAAGCCCTGGGGTCCCTTCTTGTCCCTaGGTCACTCTGTTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: CSGLGLDKATCDRVVSPGVPSCP*VTLFPG
Trigger: GCCAGGAAACAGAGTGACCAAGGGACAAGAAGGGAC...CCCAGGGCTTACCACCCTATCACACGTGGCCTTGTCTAGACCCAGTCCTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp AAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTCAGTTATGCCATTTaGGCGTCCACAGTGACAGTC +
Preference number: 5 (lower is better)
Translates to: KSICRSSTRHDESSPSEALSYAI*ASTVTV
Trigger: GACTGTCACTGTGGACGCCAAAATGGCATAACTGAG...CGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS CCA 90 bp GCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATaGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTCGGCCA +
Preference number: 5 (lower is better)
Translates to: ASRRARTLSVRVASR*KSAMIAPSNSIPRP
Trigger: TGGCCGAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp AACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCGAAGGGCTCGGACCTaGTCTGTGCGTGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: NIIKSPYAAAARAMMRAPRRART*SVRVAS
Trigger: GCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCG...GGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS CCA 90 bp GCACCCTCGCTGTCTGAGTCATTAAGCAAACCCGGAGGCTTGTCGTaGGTGTGGGTCCCCTTCCATCTGAGAACGAATGGGATGAGTTTC +
Preference number: 5 (lower is better)
Translates to: APSLSESLSKPGGLS*VWVPFHLRTNGMSF
Trigger: GAAACTCATCCCATTCGTTCTCAGATGGAAGGGGACCCACACCCACGACAAGCCTCCGGGTTTGCTTAATGACTCAGACAGCGAGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR CAA 90 bp GCACGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTGGAGCAGCTTCCTCAAGGCCATATCCTTTTaGCAGGAGTTCATCCAAAAG +
Preference number: 5 (lower is better)
Translates to: ARAMMRAPLPRRFWSSFLKAISF*QEFIQK
Trigger: CTTTTGGATGAACTCCTGCAAAAAGGATATGGCCTT...GAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGGTGGGGATGTACCGGTaGAGTTCATGGACCATGGAG +
Preference number: 5 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPVGMYR*SSWTME
Trigger: CTCCATGGTCCATGAACTCAACCGGTACATCCCCAC...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp AGCCCATGCACCCCGAACCTGACTTCACTACCAACCTTGAGCCTGTGCTGTCCTGCTGCCAACCTCGCTTaGCTCCTTAACGAAGATCTC +
Preference number: 5 (lower is better)
Translates to: SPCTPNLTSLPTLSLCCPAANLA*LLNEDL
Trigger: GAGATCTTCGTTAAGGAGCAAAGCGAGGTTGGCAGC...AGGACAGCACAGGCTCAAGGTTGGTAGTGAAGTCAGGTTCGGGGTGCATGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGAGGTTGAGGAGACTGTaGTGGGCAAAGCATGGCGGT +
Preference number: 5 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPRLRRL*WAKHGG
Trigger: ACCGCCATGCTTTGCCCACAACAGTCTCCTCAACCT...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS CCA 90 bp AAGGCCTCCTGGGAGAGTACCTTTGTGCCGAGCCTTGATAGATTCTaGCGAGAAGGAATGAGGGAACAGGTTGAGGAGACTGTTGTGGGC +
Preference number: 5 (lower is better)
Translates to: KASWESTFVPSLDRF*REGMREQVEETVVG
Trigger: GCCCACAACAGTCTCCTCAACCTGTTCCCTCATTCCTTCTCGCCAGAATCTATCAAGGCTCGGCACAAAGGTACTCTCCCAGGAGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS GCA 90 bp AAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTaGGATGATAGCACCTTCAAATTCCATTCCTCGGCCAGTGTTGAC +
Preference number: 5 (lower is better)
Translates to: KGSDLVCACGQQMEK*DDSTFKFHSSASVD
Trigger: GTCAACACTGGCCGAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS CCA 90 bp GCTCGGGAAGTAGTCTGCCTCACAGAAGAATTCAGGAAGGCCTCCTaGGAGAGTACCTTTGTGCCGAGCCTTGATAGATTCTGGCGAGAA +
Preference number: 5 (lower is better)
Translates to: AREVVCLTEEFRKAS*ESTFVPSLDRFWRE
Trigger: TTCTCGCCAGAATCTATCAAGGCTCGGCACAAAGGTACTCTCCCAGGAGGCCTTCCTGAATTCTTCTGTGAGGCAGACTACTTCCCGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS CCA 90 bp TCGCTGTCTGAGTCATTAAGCAAACCCGGAGGCTTGTCGTGGGTGTaGGTCCCCTTCCATCTGAGAACGAATGGGATGAGTTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: SLSESLSKPGGLSWV*VPFHLRTNGMSFWR
Trigger: TCTCCAGAAACTCATCCCATTCGTTCTCAGATGGAAGGGGACCCACACCCACGACAAGCCTCCGGGTTTGCTTAATGACTCAGACAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR CAA 90 bp TGGCAGAATCTGGACAAACGGACATCACTGCAAGGGTCTGTCCACCTAGCTTGGATTCCTCGGCCAGTGTaGACAGTAGTGGGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: WQNLDKRTSLQGSVHLAWIPRPV*TVVGLN
Trigger: ATTCAGCCCCACTACTGTCAACACTGGCCGAGGAAT...CCAAGCTAGGTGGACAGACCCTTGCAGTGATGTCCGTTTGTCCAGATTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp TCCTTGGTCCCACCAATGTCTAAAGCCAGCTCGAAACCTCGAGCTCCTCAGGATGCTCCTTCAGCTGCTTaGCAACATCTTTGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: SLVPPMSKASSKPRAPQDAPSAA*QHLWQR
Trigger: CCTCTGCCAAAGATGTTGCAAAGCAGCTGAAGGAGC...ATCCTGAGGAGCTCGAGGTTTCGAGCTGGCTTTAGACATTGGTGGGACCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp TCCTTGGTCCCACCAATGTCTAAAGCCAGCTCGAAACCTCGAGCTCCTCAGGATGCTGCCAACCTCGCTTaGCTCCTTAACGAAGATCTC +
Preference number: 5 (lower is better)
Translates to: SLVPPMSKASSKPRAPQDAANLA*LLNEDL
Trigger: GAGATCTTCGTTAAGGAGCAAAGCGAGGTTGGCAGC...ATCCTGAGGAGCTCGAGGTTTCGAGCTGGCTTTAGACATTGGTGGGACCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp CAGCTTGGCAGAGCTGATGACCCAAGTGGACTAAACACGGAGCTAGCAGAAACAGGTTCTGCTGCTGAGTaGCTGGGTGGCTTTAGGCAA +
Preference number: 5 (lower is better)
Translates to: QLGRADDPSGLNTELAETGSAAE*LGGFRQ
Trigger: TTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACC...TGTTTCTGCTAGCTCCGTGTTTAGTCCACTTGGGTCATCAGCTCTGCCAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS TCA 90 bp AGAGTACCTTTGTGCCGAGCCTTGATAGATTCTGGCGAGAAGGAATaGGGGAACAGGTTGAGGAGACTGTTGTGGGCAAAGCATGGCGGT +
Preference number: 5 (lower is better)
Translates to: RVPLCRALIDSGEKE*GNRLRRLLWAKHGG
Trigger: ACCGCCATGCTTTGCCCACAACAGTCTCCTCAACCTGTTCCCTCATTCCTTCTCGCCAGAATCTATCAAGGCTCGGCACAAAGGTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS-3UTR CAA 90 bp CATCTTGGTTCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTACTTCACTACCAACCTaGAGCCTGTGCTGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: HLGSAAELLGGFRQVPSCTSLPT*SLCCPL
Trigger: GAGAGGACAGCACAGGCTCAAGGTTGGTAGTGAAGT...ACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp GAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAAAATGAAACGTAGACCAACTCTGCTGCCCTaGCTGCTGGGCAGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: EIHDLLPASHPTAKMKRRPTLLP*LLGSAC
Trigger: ACAGGCACTGCCCAGCAGCAAGGGCAGCAGAGTTGG...TCTACGTTTCATTTTGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp ATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTGCTCCTTCAGCTGCTTaGCAACATCTTTGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: IIKSPYAAAARAMMRAPLAPSAA*QHLWQR
Trigger: CCTCTGCCAAAGATGTTGCAAAGCAGCTGAAGGAGC...AAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp ATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTCCGACAAAACAGGAAGAGTaGGGACACAGAGAAGTAACC +
Preference number: 5 (lower is better)
Translates to: IKSPYAAAARAMMRAPLPTKQEE*GHREVT
Trigger: GGTTACTTCTCTGTGTCCCAACTCTTCCTGTTTTGT...CGGAAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424880.2
CDS-3UTR CAA 90 bp CTGGGCAGTGCCTGTCCTAAGAGGGGACTCCCTAAAGGCCAGAGAGAGGGTGCTTCCAGAAATTTGACTTaGATGGGAGAAACAAAACAG +
Preference number: 5 (lower is better)
Translates to: LGSACPKRGLPKGQREGASRNLT*MGETKQ
Trigger: CTGTTTTGTTTCTCCCATCAAAGTCAAATTTCTGGA...AGCACCCTCTCTCTGGCCTTTAGGGAGTCCCCTCTTAGGACAGGCACTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424880.2
CDS-3UTR CAA 90 bp CTTGTCCCTTGGTCACTCTGTTTCCTGGCTAGCACTGCCAGCAAGGTCTCCAGAAAGGCCATATCCTTTTaGCAGGAGTTCATCCAAAAG +
Preference number: 5 (lower is better)
Translates to: LVPWSLCFLASTASKVSRKAISF*QEFIQK
Trigger: CTTTTGGATGAACTCCTGCAAAAAGGATATGGCCTT...TCTGGAGACCTTGCTGGCAGTGCTAGCCAGGAAACAGAGTGACCAAGGGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTAGGCTGACCAGCAAGTaGCCACTGAAGCGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: KNIIKSPYAAAARAMMRARLTSK*PLKRAE
Trigger: CTCAGCTCGCTTCAGTGGCAACTTGCTGGTCAGCCT...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp CATCTTGGTTCTGCTGCTGAGTTGCTGGGTGGCTTTAGGCAAGTCCCTTCTTGTAGCCATCCCTCTCTTTaGGAAGAAGTTCTGTCCTTA +
Preference number: 5 (lower is better)
Translates to: HLGSAAELLGGFRQVPSCSHPSL*EEVLSL
Trigger: TAAGGACAGAACTTCTTCCAAAAGAGAGGGATGGCT...ACAAGAAGGGACTTGCCTAAAGCCACCCAGCAACTCAGCAGCAGAACCAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTGTGGTGTCTGCTCACTaGCGTGCAGTCCTAAGCACA +
Preference number: 5 (lower is better)
Translates to: KNIIKSPYAAAARAMMRAVVSAH*RAVLST
Trigger: TGTGCTTAGGACTGCACGCAAGTGAGCAGACACCAC...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS-3UTR CAA 90 bp TTCAGTGTTTGTGCTTCCAACCAGAGTGAGAAATTCCCTTTGTGGGGAAACAGGTGCTTTGCAACATCTTaGGCAGAGGAACCTGAGACC +
Preference number: 5 (lower is better)
Translates to: FSVCASNQSEKFPLWGNRCFATS*AEEPET
Trigger: GGTCTCAGGTTCCTCTGCCAAAGATGTTGCAAAGCA...CCTGTTTCCCCACAAAGGGAATTTCTCACTCTGGTTGGAAGCACAAACACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS GCA 90 bp GTTTCAACACAATATGATGACAGTGCACCCCACAGAGTGGGGGACTaGACACAAGGCATTCTGAAACTTAAATCCAGACCATGGAAACTC +
Preference number: 5 (lower is better)
Translates to: VSTQYDDSAPHRVGD*TQGILKLKSRPWKL
Trigger: GAGTTTCCATGGTCTGGATTTAAGTTTCAGAATGCCTTGTGTGCAGTCCCCCACTCTGTGGGGTGCACTGTCATCATATTGTGTTGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483956.1
CDS-3UTR CAA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTTGCTTTGCAACATCTTaGGCAGAGGAACCTGAGACC +
Preference number: 5 (lower is better)
Translates to: KNIIKSPYAAAARAMMRACFATS*AEEPET
Trigger: GGTCTCAGGTTCCTCTGCCAAAGATGTTGCAAAGCA...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp ATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTCCCCTTAAGTTACATGGACACTaGGGGACAATCCTATACCAT +
Preference number: 5 (lower is better)
Translates to: IIKSPYAAAARAMMRAPLKLHGH*GTILYH
Trigger: ATGGTATAGGATTGTCCCCAAGTGTCCATGTAACTT...AAGGGGAGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS CCA 90 bp AATGGCAGGTCCCATGACTCAATGAACATGCTTGTCCAGCTCATCTaGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTCAACACAA +
Preference number: 5 (lower is better)
Translates to: NGRSHDSMNMLVQLI*KPAAFKYHLIVSTQ
Trigger: TTGTGTTGAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTGGACAAGCATGTTCATTGAGTCATGGGACCTGCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483956.1
CDS-3UTR CAA 90 bp CAGCTTGGCAGAGCTGATGACCCAAGTGGACTAAACACGGAGCTAGCAGAAACAATGACTTCCAGAAATTaGACTTTGATGGGAGAAACA +
Preference number: 5 (lower is better)
Translates to: QLGRADDPSGLNTELAETMTSRN*TLMGET
Trigger: TGTTTCTCCCATCAAAGTCAAATTTCTGGAAGTCAT...TGTTTCTGCTAGCTCCGTGTTTAGTCCACTTGGGTCATCAGCTCTGCCAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424880.2
CDS TCA 90 bp AACTGCCTTAATTTTGTTTCGTTAATGGCAGGTCCCATGACTCAATaGACATGCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAAT +
Preference number: 5 (lower is better)
Translates to: NCLNFVSLMAGPMTQ*TCLSSSSGNLLPSN
Trigger: ATTTGAAGGCAGCAGGTTTCCAGATGAGCTGGACAAGCATGTTCATTGAGTCATGGGACCTGCCATTAACGAAACAAAATTAAGGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483956.1
CDS-3UTR CAA 90 bp AAAAACATTATTAAAAGTCCATATGCCGCAGCAGCACGCGCCATGATGAGAGCTAAGGCCATATCCTTTTaGCAGGAGTTCATCCAAAAG +
Preference number: 5 (lower is better)
Translates to: KNIIKSPYAAAARAMMRAKAISF*QEFIQK
Trigger: CTTTTGGATGAACTCCTGCAAAAAGGATATGGCCTT...AGCTCTCATCATGGCGCGTGCTGCTGCGGCATATGGACTTTTAATAATGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS-3UTR CAA 90 bp GAAATACATGATCTGCTCCCAGCTTCACACCCTACTGCCAAAATGAAACGTAGAAAGTTACATGGACACTaGGGGACAATCCTATACCAT +
Preference number: 5 (lower is better)
Translates to: EIHDLLPASHPTAKMKRRKLHGH*GTILYH
Trigger: ATGGTATAGGATTGTCCCCAAGTGTCCATGTAACTT...TCTACGTTTCATTTTGGCAGTAGGGTGTGAAGCTGGGAGCAGATCATGTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243253.8
ENST00000424880.2
CDS CCA 72 bp GGCACGGGCCGCGTTCTGCAGGGGGCCGGTCAGGGTTaGCCGGCGGGCGCCCGACCGCACGGGTGTGGGGAA +
Preference number: 6 (lower is better)
Translates to: GTGRVLQGAGQG*PAGARPHGCGE
Trigger: TTCCCCACACCCGTGCGGTCGGGCGCCCGCCGGCCAACCCTGACCGGCCCCCTGCAGAACGCGGCCCGTGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491668.1
CDS GCA 72 bp GATACTCGAGAAGGGCCGGGGGCACGGGCCGCGTTCTaGAGGGGGCCGGTCAGGGTTGGCCGGCGGGCGCCC +
Preference number: 6 (lower is better)
Translates to: DTREGPGARAAF*RGPVRVGRRAP
Trigger: GGGCGCCCGCCGGCCAACCCTGACCGGCCCCCTGCAGAACGCGGCCCGTGCCCCCGGCCCTTCTCGAGTATC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491668.1
CDS CCA 72 bp TCAGGGTTGGCCGGCGGGCGCCCGACCGCACGGGTGTaGGGAAGGGGGATCTGTTCCGTCCCGGCCTCAATA +
Preference number: 6 (lower is better)
Translates to: SGLAGGRPTARV*GRGICSVPASI
Trigger: TATTGAGGCCGGGACGGAACAGATCCCCCTTCCCCACACCCGTGCGGTCGGGCGCCCGCCGGCCAACCCTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491668.1
CDS CCA 72 bp CGCGCCATGATGAGAGCTCCCCTTCCGAGGCGCTTCTaGAGCAGCTTCCTCAACCTGTCCGGGAGACGGGCT +
Preference number: 6 (lower is better)
Translates to: RAMMRAPLPRRF*SSFLNLSGRRA
Trigger: AGCCCGTCTCCCGGACAGGTTGAGGAAGCTGCTCCAGAAGCGCCTCGGAAGGGGAGCTCTCATCATGGCGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
ENST00000483956.1
ENST00000498837.1
CDS GCA 72 bp CAGGTAATAGCAAAGGCCACCAACTGGATAAGCACGTaGTGGGCCCCCAGAAGACGTGTCCGACCAGGTGCC +
Preference number: 6 (lower is better)
Translates to: QVIAKATNWIST*WAPRRRVRPGA
Trigger: GGCACCTGGTCGGACACGTCTTCTGGGGGCCCAGCACGTGCTTATCCAGTTGGTGGCCTTTGCTATTACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
ENST00000483956.1
CDS CCA 72 bp GTAATAGCAAAGGCCACCAACTGGATAAGCACGTGCTaGGCCCCCAGAAGACGTGTCCGACCAGGTGCCCAG +
Preference number: 6 (lower is better)
Translates to: VIAKATNWISTC*APRRRVRPGAQ
Trigger: CTGGGCACCTGGTCGGACACGTCTTCTGGGGGCCCAGCACGTGCTTATCCAGTTGGTGGCCTTTGCTATTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
ENST00000483956.1
CDS CCA 72 bp GTCCCCTTCCATCTGAGAACGAATGGGATGAGTTTCTaGAGAGACTTGGCCGGAGAAGGGCCGGGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: VPFHLRTNGMSF*RDLAGEGPGQL
Trigger: GAGCTGCCCCGGCCCTTCTCCGGCCAAGTCTCTCCAGAAACTCATCCCATTCGTTCTCAGATGGAAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS CAA 72 bp CCCTCGCTGTCTGAGTCATTAAGCAAACCCGGAGGCTaGTCGTGGGTGTGGGTCCCCTTCCATCTGAGAACG +
Preference number: 6 (lower is better)
Translates to: PSLSESLSKPGG*SWVWVPFHLRT
Trigger: CGTTCTCAGATGGAAGGGGACCCACACCCACGACAAGCCTCCGGGTTTGCTTAATGACTCAGACAGCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS CCA 72 bp GTCGTGGGTGTGGGTCCCCTTCCATCTGAGAACGAATaGGATGAGTTTCTGGAGAGACTTGGCCGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: VVGVGPLPSENE*DEFLERLGRRR
Trigger: CCTTCTCCGGCCAAGTCTCTCCAGAAACTCATCCCATTCGTTCTCAGATGGAAGGGGACCCACACCCACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS CCA 72 bp CTGTCTGAGTCATTAAGCAAACCCGGAGGCTTGTCGTaGGTGTGGGTCCCCTTCCATCTGAGAACGAATGGG +
Preference number: 6 (lower is better)
Translates to: LSESLSKPGGLS*VWVPFHLRTNG
Trigger: CCCATTCGTTCTCAGATGGAAGGGGACCCACACCCACGACAAGCCTCCGGGTTTGCTTAATGACTCAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS CAA 72 bp GCAACCTGCAGGGTGCCCACAGGGGAGAAGTTGGAATaGGAGGCTGAAGGGGAAATAGGCATTCCAAGTGGT +
Preference number: 6 (lower is better)
Translates to: ATCRVPTGEKLE*EAEGEIGIPSG
Trigger: ACCACTTGGAATGCCTATTTCCCCTTCAGCCTCCAATTCCAACTTCTCCCCTGTGGGCACCCTGCAGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498837.1
CDS TCA 72 bp CACCCCACAGAGTGGGGGACTGCACACAAGGCATTCTaGAACTTAAATCCAGACCATGGAAACTCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: HPTEWGTAHKAF*NLNPDHGNSLG
Trigger: CCCCAGGGAGTTTCCATGGTCTGGATTTAAGTTTCAGAATGCCTTGTGTGCAGTCCCCCACTCTGTGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483956.1
CDS CCA 72 bp GAGTCATTAAGCAAACCCGGAGGCTTGTCGTGGGTGTaGGTCCCCTTCCATCTGAGAACGAATGGGATGAGT +
Preference number: 6 (lower is better)
Translates to: ESLSKPGGLSWV*VPFHLRTNGMS
Trigger: ACTCATCCCATTCGTTCTCAGATGGAAGGGGACCCACACCCACGACAAGCCTCCGGGTTTGCTTAATGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS CAA 90 bp GAGACGGGCTCAGAAGAGCAGGGCCCCCATGCTGCCAACCTCGCTTaGCTCCTTAACGAAGATCTCAAAGTACTGGTAGATGATTGTGAC +
Preference number: 6 (lower is better)
Translates to: ETGSEEQGPHAANLA*LLNEDLKVLVDDCD
Trigger: GTCACAATCATCTACCAGTACTTTGAGATCTTCGTTAAGGAGCAAAGCGAGGTTGGCAGCATGGGGGCCCTGCTCTTCTGAGCCCGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
ENST00000483956.1
ENST00000498837.1
CDS CAA 90 bp AGCTGCTTTGCAACCTGCAGGGTGCCCACAGGGGAGAAGTTGGAATaGGAGGCTGAAGGGGAAATAGGCATTCCAAGTGGTACTGAACAG +
Preference number: 6 (lower is better)
Translates to: SCFATCRVPTGEKLE*EAEGEIGIPSGTEQ
Trigger: CTGTTCAGTACCACTTGGAATGCCTATTTCCCCTTCAGCCTCCAATTCCAACTTCTCCCCTGTGGGCACCCTGCAGGTTGCAAAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498837.1
CDS GCA 72 bp GACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTaGGATGATAGCACCTTCAAATTCCATTCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: DLVCACGQQMEK*DDSTFKFHSSA
Trigger: GGCCGAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS TCA 72 bp TTGTGCCGAGCCTTGATAGATTCTGGCGAGAAGGAATaGGGGAACAGGTTGAGGAGACTGTTGTGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: LCRALIDSGEKE*GNRLRRLLWAK
Trigger: CTTTGCCCACAACAGTCTCCTCAACCTGTTCCCTCATTCCTTCTCGCCAGAATCTATCAAGGCTCGGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS TCA 72 bp ATGACTTCCAGAAATTTGACGAGCACCCTCGCTGTCTaGGTCATTAAGCAAACCCGGAGGCTTGTCGTGGGT +
Preference number: 6 (lower is better)
Translates to: MTSRNLTSTLAV*VIKQTRRLVVG
Trigger: ACCCACGACAAGCCTCCGGGTTTGCTTAATGACTCAGACAGCGAGGGTGCTCGTCAAATTTCTGGAAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS CCA 72 bp AGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATaGAAAAGTGCGATGATAGCACCTTCAAATTCCATT +
Preference number: 6 (lower is better)
Translates to: RARTLSVRVASR*KSAMIAPSNSI
Trigger: AATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS CCA 72 bp TGGGAGAGTACCTTTGTGCCGAGCCTTGATAGATTCTaGCGAGAAGGAATGAGGGAACAGGTTGAGGAGACT +
Preference number: 6 (lower is better)
Translates to: WESTFVPSLDRF*REGMREQVEET
Trigger: AGTCTCCTCAACCTGTTCCCTCATTCCTTCTCGCCAGAATCTATCAAGGCTCGGCACAAAGGTACTCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS CCA 72 bp GTAGTCTGCCTCACAGAAGAATTCAGGAAGGCCTCCTaGGAGAGTACCTTTGTGCCGAGCCTTGATAGATTC +
Preference number: 6 (lower is better)
Translates to: VVCLTEEFRKAS*ESTFVPSLDRF
Trigger: GAATCTATCAAGGCTCGGCACAAAGGTACTCTCCCAGGAGGCCTTCCTGAATTCTTCTGTGAGGCAGACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464451.5
CDS CAA 72 bp TCAGAAGAGCAGGGCCCCCATGCTGCCAACCTCGCTTaGCTCCTTAACGAAGATCTCAAAGTACTGGTAGAT +
Preference number: 6 (lower is better)
Translates to: SEEQGPHAANLA*LLNEDLKVLVD
Trigger: ATCTACCAGTACTTTGAGATCTTCGTTAAGGAGCAAAGCGAGGTTGGCAGCATGGGGGCCCTGCTCTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
ENST00000483956.1
ENST00000498837.1
CDS GCA 72 bp CAGGTCCACTCGGAAGCCCTGGAAATAGATGACCACTaGAAAGACAAAGATGGTGGCGATGAGATTCATGAG +
Preference number: 6 (lower is better)
Translates to: QVHSEALEIDDH*KDKDGGDEIHE
Trigger: CTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGGCTTCCGAGTGGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS CCA 72 bp TGCACACAAGGCATTCTGAAACTTAAATCCAGACCATaGAAACTCCCTGGGGTTGGATCTGGACACACCTGG +
Preference number: 6 (lower is better)
Translates to: CTQGILKLKSRP*KLPGVGSGHTW
Trigger: CCAGGTGTGTCCAGATCCAACCCCAGGGAGTTTCCATGGTCTGGATTTAAGTTTCAGAATGCCTTGTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483956.1
CDS GCA 72 bp CAATATGATGACAGTGCACCCCACAGAGTGGGGGACTaGACACAAGGCATTCTGAAACTTAAATCCAGACCA +
Preference number: 6 (lower is better)
Translates to: QYDDSAPHRVGD*TQGILKLKSRP
Trigger: TGGTCTGGATTTAAGTTTCAGAATGCCTTGTGTGCAGTCCCCCACTCTGTGGGGTGCACTGTCATCATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483956.1
CDS CCA 72 bp CAGGAGCCCAGCATGAACACTATGTATACAACTGCATaGACCGGGTCTTCTAACACGGAGCCAAAAGATTCT +
Preference number: 6 (lower is better)
Translates to: QEPSMNTMYTTA*TGSSNTEPKDS
Trigger: AGAATCTTTTGGCTCCGTGTTAGAAGACCCGGTCCATGCAGTTGTATACATAGTGTTCATGCTGGGCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
ENST00000483956.1
CDS CCA 72 bp TCCCATGACTCAATGAACATGCTTGTCCAGCTCATCTaGAAACCTGCTGCCTTCAAATACCATCTCATCGTT +
Preference number: 6 (lower is better)
Translates to: SHDSMNMLVQLI*KPAAFKYHLIV
Trigger: AACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTGGACAAGCATGTTCATTGAGTCATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483956.1
CDS TCA 72 bp AATTTTGTTTCGTTAATGGCAGGTCCCATGACTCAATaGACATGCTTGTCCAGCTCATCTGGAAACCTGCTG +
Preference number: 6 (lower is better)
Translates to: NFVSLMAGPMTQ*TCLSSSSGNLL
Trigger: CAGCAGGTTTCCAGATGAGCTGGACAAGCATGTTCATTGAGTCATGGGACCTGCCATTAACGAAACAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483956.1
CDS GCA 72 bp AAGAGAGAAATACCAGAGCCAAGGCCATATCCTTTTTaGAGGAGTTCATCCAAAAGTAGGACAATTAAGCCA +
Preference number: 6 (lower is better)
Translates to: KREIPEPRPYPF*RSSSKSRTIKP
Trigger: TGGCTTAATTGTCCTACTTTTGGATGAACTCCTGCAAAAAGGATATGGCCTTGGCTCTGGTATTTCTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243253.8
ENST00000424880.2
ENST00000464451.5
CDS GCA 72 bp AATGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTaGCTTCAAATACCATCTCATCGTTTCAACACAATA +
Preference number: 6 (lower is better)
Translates to: NEHACPAHLETC*LQIPSHRFNTI
Trigger: TATTGTGTTGAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTGGACAAGCATGTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483956.1