RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC31B (Homo sapiens)

Ensembl gene IDs: ENSG00000075826

Ensembl transcript IDs: ENST00000370345.8, ENST00000462434.5, ENST00000469546.6, ENST00000469824.1, ENST00000479697.5, ENST00000480905.1, ENST00000482456.6, ENST00000484848.5, ENST00000485800.6, ENST00000492667.5, ENST00000494350.1, ENST00000498298.1

Found 1262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGTGGCCAGGCTGCCCTGGGCTGCCAGGAGGTTGGCATACTGAGTaGCCCTGTAGGTTGTGGCAGGGCCTGGGCTCACCCCATGAGGAC +
Preference number: 1 (lower is better)
Translates to: QWPGCPGLPGGWHTE*PCRLWQGLGSPHED
Trigger: GTCCTCATGGGGTGAGCCCAGGCCCTGCCACAACCTACAGGGTCACTCAGTATGCCAACCTCCTGGCAGCCCAGGGCAGCCTGGCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR GCA 90 bp GCCCGCCACCTGGGCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTaGATCCACACATCGGGCAACCTCATGGAGCCCAGCCACGACATG +
Preference number: 1 (lower is better)
Translates to: ARHLGMHCKALLKAS*IHTSGNLMEPSHDM
Trigger: CATGTCGTGGCTGGGCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGCCCAGGTGGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR GCA 90 bp GGACACCTCGCTGAAGCTGCTACAGCCCGCCACCTGGGCATGCACTaGAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAAC +
Preference number: 1 (lower is better)
Translates to: GHLAEAATARHLGMH*KALLKASCIHTSGN
Trigger: GTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGCCCAGGTGGCGGGCTGTAGCAGCTTCAGCGAGGTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 90 bp CAGGAGGTTGGCATACTGAGTGACCCTGTAGGTTGTGGCAGGGCCTaGGCTCACCCCATGAGGACCCCGCAGTTGCTCCAAGCTCCTGTT +
Preference number: 1 (lower is better)
Translates to: QEVGILSDPVGCGRA*AHPMRTPQLLQAPV
Trigger: AACAGGAGCTTGGAGCAACTGCGGGGTCCTCATGGGGTGAGCCCAGGCCCTGCCACAACCTACAGGGTCACTCAGTATGCCAACCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 90 bp GGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGCCCGCCACCTaGGCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACA +
Preference number: 1 (lower is better)
Translates to: GMKLDTSLKLLQPAT*ACTARPCSKLPAST
Trigger: TGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGCCCAGGTGGCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 90 bp GGGAGGTATCAGTGGTGCTTGTGCCACTTGCTCTGGCACCTGCAGTaGTGGGAGAGGCTGGCCTTTGCTGAAGGAAGAGGAGATCTGGGG +
Preference number: 1 (lower is better)
Translates to: GRYQWCLCHLLWHLQ*WERLAFAEGRGDLG
Trigger: CCCCAGATCTCCTCTTCCTTCAGCAAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATACCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR CCA 90 bp TGGGTGAGGAGTCAAGATGCCAGTGGTTGGGAGGACACTAGAGCATaGGGCACCTGGGTCCCCTGGAAGGTATGGCACAGGGAAGCTTGC +
Preference number: 1 (lower is better)
Translates to: WVRSQDASGWEDTRA*GTWVPWKVWHREAC
Trigger: GCAAGCTTCCCTGTGCCATACCTTCCAGGGGACCCAGGTGCCCCATGCTCTAGTGTCCTCCCAACCACTGGCATCTTGACTCCTCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR CCA 90 bp CTTGAGGTCCAGGCCTTACCCCAGGGCTCAAAGGCAAAGGCTGGATaGCCTGGGGCCCAGGTGCCCTGTAGTCACTTATATTCTGTGTCC +
Preference number: 1 (lower is better)
Translates to: LEVQALPQGSKAKAG*PGAQVPCSHLYSVS
Trigger: GGACACAGAATATAAGTGACTACAGGGCACCTGGGCCCCAGGCCATCCAGCCTTTGCCTTTGAGCCCTGGGGTAAGGCCTGGACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000482456.6
3UTR GCA 90 bp TTCAGGGGAGGTATCAGTGGTGCTTGTGCCACTTGCTCTGGCACCTaGAGTGGTGGGAGAGGCTGGCCTTTGCTGAAGGAAGAGGAGATC +
Preference number: 1 (lower is better)
Translates to: FRGGISGACATCSGT*SGGRGWPLLKEEEI
Trigger: GATCTCCTCTTCCTTCAGCAAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATACCTCCCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 90 bp GGGAGGTATCAGTGGTGCTTGTGCCACTTGCTCTGGCACCTGCAGTaGTGGGAGAGGCTGGCCTTTGCTGAAGGAAGAGGAGATCTTGTC +
Preference number: 1 (lower is better)
Translates to: GRYQWCLCHLLWHLQ*WERLAFAEGRGDLV
Trigger: GACAAGATCTCCTCTTCCTTCAGCAAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATACCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482456.6
3UTR TCA 90 bp TCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTaGATCACGGGAAGTCGATCATCCTCTGAGCACAGCACTAACTGG +
Preference number: 1 (lower is better)
Translates to: SSTFKGEEAKRKSHS*ITGSRSSSEHSTNW
Trigger: CCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTCCCGTGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
3UTR GCA 90 bp TCCCTGAGCACACATAACAGAGTCTGGCTTCGGAGGTTAGTGCCCTaGTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCT +
Preference number: 1 (lower is better)
Translates to: SLSTHNRVWLRRLVP*CPPVPCEFPACHRA
Trigger: AGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGACTCTGTTATGTGTGCTCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR GCA 90 bp AGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTaGTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCTTCCTTTCCA +
Preference number: 1 (lower is better)
Translates to: SQLQTGSSVGEAPQS*SSRTDALGAAPSFP
Trigger: TGGAAAGGAAGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR TCA 90 bp CAGAAGGCCTGTTGTCTGTCACTGTTGAGGTCATTTCCCTTGGGCTaGGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGCC +
Preference number: 1 (lower is better)
Translates to: QKACCLSLLRSFPLG*GLSPSPTSLFNHVA
Trigger: GGCCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAAATGACCTCAACAGTGACAGACAACAGGCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR TCA 90 bp AGAGTACAAACTGATCCAGCCGTTGAAGGAGGCAGCAGAGAACACTaGAGGGTCCCGAGGGCACCACTGCACATCAAAGCACCAGCTGCT +
Preference number: 1 (lower is better)
Translates to: RVQTDPAVEGGSREH*RVPRAPLHIKAPAA
Trigger: AGCAGCTGGTGCTTTGATGTGCAGTGGTGCCCTCGGGACCCTTCAGTGTTCTCTGCTGCCTCCTTCAACGGCTGGATCAGTTTGTACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR GCA 90 bp ACACTGAAGGGTCCCGAGGGCACCACTGCACATCAAAGCACCAGCTaGTCTGTGTTGGTAGCTTATATACCACCTCACTGCTCCCCAGGT +
Preference number: 1 (lower is better)
Translates to: TLKGPEGTTAHQSTS*SVLVAYIPPHCSPG
Trigger: ACCTGGGGAGCAGTGAGGTGGTATATAAGCTACCAACACAGAGCAGCTGGTGCTTTGATGTGCAGTGGTGCCCTCGGGACCCTTCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR CCA 90 bp AGCTTATATACCACCTCACTGCTCCCCAGGTTCCGGCACAAGATCTaGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCAGCCTGG +
Preference number: 1 (lower is better)
Translates to: SLYTTSLLPRFRHKI*LSLALVSSSSASAW
Trigger: CCAGGCTGATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAACCTGGGGAGCAGTGAGGTGGTATATAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR TCA 90 bp TGCAGCTCAGCTGATCGCATCAGGAATTCAGATTCTGTGGTGACTTaGCTGATGAAGACTAGGCGGGGGCAAGGCTGTGGCACCAGATGG +
Preference number: 1 (lower is better)
Translates to: CSSADRIRNSDSVVT*LMKTRRGQGCGTRW
Trigger: CCATCTGGTGCCACAGCCTTGCCCCCGCCTAGTCTTCATCAGTCAAGTCACCACAGAATCTGAATTCCTGATGCGATCAGCTGAGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR TCA 90 bp CTCCCAAGGAGTCATGTTCTGAGGGACCAGCTCATCAAAGAAGGCTaGGGAAGCAGAGGCTTCCTTTGTGGTGTGTTTGGAGGCCTGGCT +
Preference number: 1 (lower is better)
Translates to: LPRSHVLRDQLIKEG*GSRGFLCGVFGGLA
Trigger: AGCCAGGCCTCCAAACACACCACAAAGGAAGCCTCTGCTTCCTCAGCCTTCTTTGATGAGCTGGTCCCTCAGAACATGACTCCTTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR CCA 90 bp TATCATCACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTaGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCT +
Preference number: 1 (lower is better)
Translates to: YHHRRNGLGLRLQHR*SQGQFPIGCGSPAP
Trigger: AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTGATGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR TCA 90 bp TTCTGCTCAGCACCCATCCCTCACGTCCATGAGTTGTTCAAAGGGTaGACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAAT +
Preference number: 1 (lower is better)
Translates to: FCSAPIPHVHELFKG*TAVSSTPDPGLQRN
Trigger: ATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR TCA 90 bp AAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATaGGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCC +
Preference number: 1 (lower is better)
Translates to: KFPLLVLLSTHPSRP*VVQRVNSSQLYPRP
Trigger: GGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR TCA 90 bp TGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATaGTGTCTCTTTAGAGTGGAGGGTAGCTCCCACAACAATCCGGGG +
Preference number: 1 (lower is better)
Translates to: WSWDLVRRLGSQSVR*CLFRVEGSSHNNPG
Trigger: CCCCGGATTGTTGTGGGAGCTACCCTCCACTCTAAAGAGACATCATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR TCA 90 bp AGTCCATCAATATCTGGCTGCAGAAGGCCTGTTGTCTGTCACTGTTaGGGTCATTTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGT +
Preference number: 1 (lower is better)
Translates to: SPSISGCRRPVVCHC*GHFPWAEDSHLAPR
Trigger: ACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAAATGACCTCAACAGTGACAGACAACAGGCCTTCTGCAGCCAGATATTGATGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469546.6
3UTR GCA 90 bp TTGAAGGAGGCAGCAGAGAACACTGAAGGGTCCCGAGGGCACCACTaGACATCAAAGCACCAGCTGCTCTGTGTTGGTAGCTTATATACC +
Preference number: 1 (lower is better)
Translates to: LKEAAENTEGSRGHH*TSKHQLLCVGSLYT
Trigger: GGTATATAAGCTACCAACACAGAGCAGCTGGTGCTTTGATGTGCAGTGGTGCCCTCGGGACCCTTCAGTGTTCTCTGCTGCCTCCTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR GCA 90 bp TCTCATCTCCTTGCACCTGAGCTGTCTCTGGCGGGCTTCAGGAACTaGCACAGCATCTTTTCACTTTGCAGTAAAGCTTGCTGGCTCTTG +
Preference number: 1 (lower is better)
Translates to: SHLLAPELSLAGFRN*HSIFSLCSKACWLL
Trigger: CAAGAGCCAGCAAGCTTTACTGCAAAGTGAAAAGATGCTGTGGCAGTTCCTGAAGCCCGCCAGAGACAGCTCAGGTGCAAGGAGATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
3UTR CCA 90 bp ACCTGCCTGATGTATAGTCTCATCTCCTTGCACCTGAGCTGTCTCTaGCGGGCTTCAGGAACTGCCACAGCATCTTTTCACTTTGCAGTA +
Preference number: 1 (lower is better)
Translates to: TCLMYSLISLHLSCL*RASGTATASFHFAV
Trigger: TACTGCAAAGTGAAAAGATGCTGTGGCAGTTCCTGAAGCCCGCCAGAGACAGCTCAGGTGCAAGGAGATGAGACTATACATCAGGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
3UTR GCA 90 bp AGCATTCTCTACCAAGCCCTTCAAACCTTGTCAGCCTGTCTCATATaGTGGACTTCCCAGCTCCTACCCATCACAGAGTACAAACTGATC +
Preference number: 1 (lower is better)
Translates to: SILYQALQTLSACLI*WTSQLLPITEYKLI
Trigger: GATCAGTTTGTACTCTGTGATGGGTAGGAGCTGGGAAGTCCAGCATATGAGACAGGCTGACAAGGTTTGAAGGGCTTGGTAGAGAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR CCA 90 bp GAAGTGAGTGGTAGCGAGGGTGGGACTCCCATGCAAGTAGGCTCTTaGAAAGACTACTACATTCAAAGTCTACAATGGAGTGTGGCACAA +
Preference number: 1 (lower is better)
Translates to: EVSGSEGGTPMQVGS*KDYYIQSLQWSVAQ
Trigger: TTGTGCCACACTCCATTGTAGACTTTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCATGGGAGTCCCACCCTCGCTACCACTCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR CCA 90 bp ATTCTCTACCAAGCCCTTCAAACCTTGTCAGCCTGTCTCATATGCTaGACTTCCCAGCTCCTACCCATCACAGAGTACAAACTGATCCAG +
Preference number: 1 (lower is better)
Translates to: ILYQALQTLSACLIC*TSQLLPITEYKLIQ
Trigger: CTGGATCAGTTTGTACTCTGTGATGGGTAGGAGCTGGGAAGTCCAGCATATGAGACAGGCTGACAAGGTTTGAAGGGCTTGGTAGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR GCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTaGCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAAC +
Preference number: 1 (lower is better)
Translates to: LRSHLNRRSLGEKIS*PRSLQSVVLGRVKN
Trigger: GTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 90 bp GCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTaGGCTTTATCATCACAGAAGGAATGGCCTTGGGCTAAGGCTCCA +
Preference number: 1 (lower is better)
Translates to: ALEENHSLIWLQFQN*ALSSQKEWPWAKAP
Trigger: TGGAGCCTTAGCCCAAGGCCATTCCTTCTGTGATGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR CCA 90 bp ATGCAAGTAGGCTCTTGGAAAGACTACTACATTCAAAGTCTACAATaGAGTGTGGCACAAAATGGATCTATAGAAGAGAGAAAGATAAGA +
Preference number: 1 (lower is better)
Translates to: MQVGSWKDYYIQSLQ*SVAQNGSIEERKIR
Trigger: TCTTATCTTTCTCTCTTCTATAGATCCATTTTGTGCCACACTCCATTGTAGACTTTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp TTCCTGCATCCACACATCGGGCAACCTCATGGAGCCCAGCCACGACATGAGGTGCCTGGGCTCACCCCATaGGGACCCCGCAGTTGCTCC +
Preference number: 2 (lower is better)
Translates to: FLHPHIGQPHGAQPRHEVPGLTP*GPRSCS
Trigger: GGAGCAACTGCGGGGTCCTCATGGGGTGAGCCCAGG...CACCTCATGTCGTGGCTGGGCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATACCTGGGCTCACCCCATaGGGACCCCGCAGTTGCTCC +
Preference number: 2 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDIPGLTP*GPRSCS
Trigger: GGAGCAACTGCGGGGTCCTCATGGGGTGAGCCCAGG...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CAA 90 bp CCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTaGCCCAGCACTCCACCAGCCGCTCCACACTCCCTGAGCACACAT +
Preference number: 2 (lower is better)
Translates to: PSGPAEPWGTKPGGI*PSTPPAAPHSLSTH
Trigger: ATGTGTGCTCAGGGAGTGTGGAGCGGCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp AGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGCCCGCAGCTGGACACCTCGCTaGAGCTGCTACAGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: SLQDRHEAGHLAEAATARSWTPR*SCYSPP
Trigger: TGGCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCT...GCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAAAGGCAAAGGCTGGATaGCCTGGGGCCCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: LQGPAQSFLHPHIGQPHGKAKAG*PGAQVP
Trigger: GGGCACCTGGGCCCCAGGCCATCCAGCCTTTGCCTT...TCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp GCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGCCCCTGCCTCCAGGCCTaGGAGTGTCTTGGACAGATC +
Preference number: 2 (lower is better)
Translates to: ARPCSKLPASTHRATSWSPCLQA*ECLGQI
Trigger: GATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGG...GCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GAGCATGACTCACACTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTGGTTGTGGCAGGGCCTaGGCTCACCCCATGAGGACC +
Preference number: 2 (lower is better)
Translates to: EHDSHWRQGAVREESLVAGCGRA*AHPMRT
Trigger: GGTCCTCATGGGGTGAGCCCAGGCCCTGCCACAACC...AGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGGAGGCTGCTGTGACTTaGATCCCAGGGTCATTGGCA +
Preference number: 2 (lower is better)
Translates to: VALQHLQGRGGKAQVPQLEAAVT*IPGSLA
Trigger: TGCCAATGACCCTGGGATCCAAGTCACAGCAGCCTC...CAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
3UTR CAA 90 bp GTAGGTTGTGGCAGGGCCTGGGCTCACCCCATGAGGACCCCGCAGTaGCTCCAAGCTCCTGTTAAGAACCATCACCTTCTCCATCAGGTC +
Preference number: 2 (lower is better)
Translates to: VGCGRAWAHPMRTPQ*LQAPVKNHHLLHQV
Trigger: GACCTGATGGAGAAGGTGATGGTTCTTAACAGGAGCTTGGAGCAACTGCGGGGTCCTCATGGGGTGAGCCCAGGCCCTGCCACAACCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp TTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGCCCTGCCTCCAGGCCTaGGAGTGTCTTGGACAGATC +
Preference number: 2 (lower is better)
Translates to: FPWAEDSHLAPRHSSTMWPCLQA*ECLGQI
Trigger: GATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGG...CCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCCCTGGGCTCACCCCATaGGGACCCCGCAGTTGCTCC +
Preference number: 2 (lower is better)
Translates to: APVSQPKTASSKRQFIPFPGLTP*GPRSCS
Trigger: GGAGCAACTGCGGGGTCCTCATGGGGTGAGCCCAGG...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp TTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGATGCCAGGCCAGGCCTaGGCAGTGCATCCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: FPWAEDSHLAPRHSSTMWMPGQA*AVHPVA
Trigger: AGCAACAGGATGCACTGCTCAGGCCTGGCCTGGCAT...CCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp CATCAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCACTCTGGAGGCTGCTGTaGCTTGGATCCCAGGGTCAT +
Preference number: 2 (lower is better)
Translates to: HQPGSMTLTRSPCCGSPALWRLL*LGSQGH
Trigger: ATGACCCTGGGATCCAAGTCACAGCAGCCTCCAGAG...TGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
3UTR-3UTR GCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCAGCCTGGTGGCATTTTaGCCAGCACTCCACCAGCCG +
Preference number: 2 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLSLVAF*PALHQP
Trigger: CGGCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCT...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCTTCTCTGGCACCTGCAGTaGTGGGAGAGGCTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: EKRLKAALQGLMLWGQLLLWHLQ*WERLAF
Trigger: AAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAG...AAGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTAAGGCAAAGGCTGGATaGCCTGGGGCCCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLKAKAG*PGAQVP
Trigger: GGGCACCTGGGCCCCAGGCCATCCAGCCTTTGCCTT...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTCAGGGGTGAGGCTCGCCTGTCTCATATGCTaGACTTCCCAGCTCCTACCC +
Preference number: 2 (lower is better)
Translates to: LETGGCEGRIPCSSGVRLACLIC*TSQLLP
Trigger: GGGTAGGAGCTGGGAAGTCCAGCATATGAGACAGGC...GAGCCTCACCCCTGAGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp AGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCCTGCCTCCAGGCCTaGGAGTGTCTTGGACAGATC +
Preference number: 2 (lower is better)
Translates to: RVNSSQLYPRPWATEKYGPCLQA*ECLGQI
Trigger: GATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGG...TCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp AGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGAGGCTGGCCTTTGCTaGAGGAAGAGGAGATCTGGG +
Preference number: 2 (lower is better)
Translates to: RLVPCCPPVPCEFPACHREAGLC*RKRRSG
Trigger: CCCAGATCTCCTCTTCCTTCAGCAAAGGCCAGCCTC...TCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp GCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCATCGCTGGTGATGACTaGGGGGTGAAAACCCTTGGC +
Preference number: 2 (lower is better)
Translates to: ACTARPCSKLPASTHRATIAGDD*GVKTLG
Trigger: GCCAAGGGTTTTCACCCCTCAGTCATCACCAGCGAT...GGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTGCTGAAGCTGCAGGCTaGGTTCTCCTGGAACTCCTG +
Preference number: 2 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPAAEAAG*VLLELL
Trigger: CAGGAGTTCCAGGAGAACTCAGCCTGCAGCTTCAGC...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR TCA 90 bp CAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCAGCCTGGCTATGCCAGGCCAGGCCTaGGCAGTGCATCCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: QDLAVLSTSEQQLSISLAMPGQA*AVHPVA
Trigger: AGCAACAGGATGCACTGCTCAGGCCTGGCCTGGCAT...AGCCAGGCTGATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
3UTR-3UTR TCA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCATCAGGTGGCAGGTGCTaGAGCTGCTGCAGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPSGGRC*SCCRLS
Trigger: ACTCAGCCTGCAGCAGCTTCAGCACCTGCCACCTGA...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482456.6
3UTR-3UTR TCA 90 bp CATCAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCATCCAAGACAGTGCCTTaGTGTCCTCTGGAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: HQPGSMTLTRSPCCGSPASKTVP*CPLEAA
Trigger: AGCAGCCTCCAGAGGACATCAAGGCACTGTCTTGGA...TGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
3UTR-3UTR GCA 90 bp TCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCTATCAGTGGTGCTTGTaGCACTTGCTCTGGCACCTG +
Preference number: 2 (lower is better)
Translates to: SCRAMGDKAWWHFAQHSTYQWCL*HLLWHL
Trigger: CAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATA...GGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp AGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGATCCCAAGGCCTCCTaGAGCTCAGCTGATCGCATC +
Preference number: 2 (lower is better)
Translates to: RLVPCCPPVPCEFPACHRDPKAS*SSADRI
Trigger: GATGCGATCAGCTGAGCTGCAGGAGGCCTTGGGATC...TCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCGAGATCCCACACAACTaGCTTGCCACTGGGGTGAGC +
Preference number: 2 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLEIPHN*LATGVS
Trigger: GCTCACCCCAGTGGCAAGGCAGTTGTGTGGGATCTC...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGTCCCGAGGGCACCACTaGACATCAAAGCACCAGCTG +
Preference number: 2 (lower is better)
Translates to: CKALLKASCIHTSGNLMESRGHH*TSKHQL
Trigger: CAGCTGGTGCTTTGATGTGCAGTGGTGCCCTCGGGA...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp TGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAGCAAGCAGGCACTCAGCTaGTTTGGAGCCAAGCCTACA +
Preference number: 2 (lower is better)
Translates to: CRAMGDKAWWHFAQHSTSKQALS*FGAKPT
Trigger: TGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGCTT...GCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCCCAAACCCCGGGCCCTaGTCTCCCAATCTCCAATAT +
Preference number: 2 (lower is better)
Translates to: ACTARPCSKLPASTHRATPNPGP*SPNLQY
Trigger: ATATTGGAGATTGGGAGACCAGGGCCCGGGGTTTGG...GGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGTGTGTTTGGAGGCCTaGCTGCAGAAGGCCTGTTGT +
Preference number: 2 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPVCLEA*LQKACC
Trigger: ACAACAGGCCTTCTGCAGCCAGGCCTCCAAACACAC...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GGTGAAAACCCTTGGCCTTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGAGGGGACAAAGCCTGGTaGCATTTTGCCCAGCACTCC +
Preference number: 2 (lower is better)
Translates to: GENPWPWRWSWDLVRRLGGDKAW*HFAQHS
Trigger: GGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCC...TCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp AGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGCCCGCATGGGGGACAAAGCCTaGTGGCATTTTGCCCAGCAC +
Preference number: 2 (lower is better)
Translates to: SLQDRHEAGHLAEAATARMGDKA*WHFAQH
Trigger: GTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCAT...GCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTCAGGGGTGAGGCTCAGGGGTGAAAACCCTTaGCCTTGGAGATGGAGTTGG +
Preference number: 2 (lower is better)
Translates to: LETGGCEGRIPCSSGVRLRGENP*PWRWSW
Trigger: CCAACTCCATCTCCAAGGCCAAGGGTTTTCACCCCT...GAGCCTCACCCCTGAGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGGACAGGGAGCAGCGTTaGAGAAGCGCCTCAAAGCTG +
Preference number: 2 (lower is better)
Translates to: CKALLKASCIHTSGNLMEDREQR*RSASKL
Trigger: CAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTC...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CAA 90 bp GCCCTGAGACATGTGGTGGCTGCGAGGGAGAAGGACCCCCAACCCTaGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCA +
Preference number: 2 (lower is better)
Translates to: ALRHVVAAREKDPQP*RSSAGRESFLNMAP
Trigger: TGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGGTTGGGGGTCCTTCTCCCTCGCAGCCACCACATGTCTCAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
3UTR CAA 90 bp ACTTCCCAGCTCCTACCCATCACAGAGTACAAACTGATCCAGCCGTaGAAGGAGGCAGCAGAGAACACTGAAGGGTCCCGAGGGCACCAC +
Preference number: 2 (lower is better)
Translates to: TSQLLPITEYKLIQP*KEAAENTEGSRGHH
Trigger: GTGGTGCCCTCGGGACCCTTCAGTGTTCTCTGCTGCCTCCTTCAACGGCTGGATCAGTTTGTACTCTGTGATGGGTAGGAGCTGGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR CAA 90 bp AACTGCCTTGCCACTGGGGTGAGCAGAAGACAGAATGTGTTGGGCTaGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTGGAGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: NCLATGVSRRQNVLG*PVPRQCLDVLWRLL
Trigger: CAGCAGCCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
3UTR-3UTR TCA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTGGGTCCCACGGTCCCTaGAATACTACAGGGCCCATC +
Preference number: 2 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLGSHGP*NTTGPI
Trigger: GATGGGCCCTGTAGTATTTCAGGGACCGTGGGACCC...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp CTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTCAGGGGTGAGGCTCGATTCTGTGGTGACTTaGCTGATGAAGACTAGGCGG +
Preference number: 2 (lower is better)
Translates to: LETGGCEGRIPCSSGVRLDSVVT*LMKTRR
Trigger: CCGCCTAGTCTTCATCAGTCAAGTCACCACAGAATC...GAGCCTCACCCCTGAGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp GAGCATGACTCACACTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTTCATCTCCTTGCACCTaGGCTGTCTCTGGCGGGCTT +
Preference number: 2 (lower is better)
Translates to: EHDSHWRQGAVREESLVASSPCT*AVSGGL
Trigger: AAGCCCGCCAGAGACAGCTCAGGTGCAAGGAGATGA...AGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCATCATCTCCTTGCACCTaGGCTGTCTCTGGCGGGCTT +
Preference number: 2 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPSSPCT*AVSGGL
Trigger: AAGCCCGCCAGAGACAGCTCAGGTGCAAGGAGATGA...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp AGTGGCCTCCTAGCAAGAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATCATTTCCCTTGGGCTaGGGACTCTCACCTAGCCCC +
Preference number: 2 (lower is better)
Translates to: SGLLAREAAWFRPAAYERSFPLG*GLSPSP
Trigger: GGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAAATGA...TCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGCTAGGAGGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp CAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCTCATCAAAGAAGGCTaGGGAAGCAGAGGCTTCCTT +
Preference number: 2 (lower is better)
Translates to: QVLQSHGGQSLVAFCPALLIKEG*GSRGFL
Trigger: AAGGAAGCCTCTGCTTCCTCAGCCTTCTTTGATGAG...GAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGCCGCTCCACACTCCCTaGGCACACATAACAGAGTCT +
Preference number: 2 (lower is better)
Translates to: CKALLKASCIHTSGNLMEPLHTP*AHITES
Trigger: AGACTCTGTTATGTGTGCTCAGGGAGTGTGGAGCGG...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp GAGGACAGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGGAGTTGGGACCTGGTaGGAAGGCTGGGATCCCAAT +
Preference number: 2 (lower is better)
Translates to: EDSLQDRHEAGHLAEAATGVGTW*EGWDPN
Trigger: ATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCC...TGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp AGGCTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGTGATGACTGAGGGGTaGAAACCCTTGGCCTTGGAG +
Preference number: 2 (lower is better)
Translates to: RLQHRWSQGQFPIGCGSPVMTEG*KPLALE
Trigger: CTCCAAGGCCAAGGGTTTTCACCCCTCAGTCATCAC...AGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp ACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTCTGGAGGCTGCTGTaGCTTGGATCCCAGGGTCAT +
Preference number: 2 (lower is better)
Translates to: TGSSVGEAPQSCSSRTDALWRLL*LGSQGH
Trigger: ATGACCCTGGGATCCAAGTCACAGCAGCCTCCAGAG...AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR-3UTR GCA 90 bp AGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCGCACTAGGGCAAAGGTaGAGCCCTCCCAAACCCCGG +
Preference number: 2 (lower is better)
Translates to: SATNANPIGEGSPETCGGALGQR*SPPKPR
Trigger: CCGGGGTTTGGGAGGGCTGCACCTTTGCCCTAGTGC...GCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR GCA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCATATCAGTGGTGCTTGTaGCACTTGCTCTGGCACCTG +
Preference number: 2 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPYQWCL*HLLWHL
Trigger: CAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATA...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTGATCCCAAGGCCTCCTaGAGCTCAGCTGATCGCATC +
Preference number: 2 (lower is better)
Translates to: AALLFHASSQHVTELGKFDPKAS*SSADRI
Trigger: GATGCGATCAGCTGAGCTGCAGGAGGCCTTGGGATC...AAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp ACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTGATCCCAAGGCCTCCTaGAGCTCAGCTGATCGCATC +
Preference number: 2 (lower is better)
Translates to: TGSSVGEAPQSCSSRTDADPKAS*SSADRI
Trigger: GATGCGATCAGCTGAGCTGCAGGAGGCCTTGGGATC...AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGCTCCAGACGCTGGGCTaGCTCTTCCAGCTTCCTTTT +
Preference number: 2 (lower is better)
Translates to: CKALLKASCIHTSGNLMELQTLG*LFQLPF
Trigger: AAAAGGAAGCTGGAAGAGGCAGCCCAGCGTCTGGAG...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GTTCCGGCACAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCGAGATCCCACACAACTaGCTTGCCACTGGGGTGAGC +
Preference number: 2 (lower is better)
Translates to: VPAQDLAVLSTSEQQLSIEIPHN*LATGVS
Trigger: GCTCACCCCAGTGGCAAGGCAGTTGTGTGGGATCTC...GATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
3UTR-3UTR GCA 90 bp TCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCAATGTCCTCTGGAGGCTaGTGTGACTTGGATCCCAGG +
Preference number: 2 (lower is better)
Translates to: SPAPSRARRQSASPTAESMSSGG*CDLDPR
Trigger: CCTGGGATCCAAGTCACAGCAGCCTCCAGAGGACAT...TGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
3UTR-3UTR CCA 90 bp TTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGAGGCTCCAACATAGGTaGAGTCAAGGGCAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: FPWAEDSHLAPRHSSTMWRLQHR*SQGQFP
Trigger: GGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT...CCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp CACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTGGAGTCAAGGGCAGTTGTGCCACTTGCTCTaGCACCTGCAGTGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: HRRNGLGLRLQHRWSQGQLCHLL*HLQWWE
Trigger: CTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAA...CTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp AGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGACAGGGGAGGTATCAGTaGTGCTTGTGCCACTTGCTC +
Preference number: 2 (lower is better)
Translates to: RLVPCCPPVPCEFPACHRQGRYQ*CLCHLL
Trigger: GAGCAAGTGGCACAAGCACCACTGATACCTCCCCTG...TCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GGTGAAAACCCTTGGCCTTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCTGTACCCCCAGCCTaGGCCAGGATAATGGCATCA +
Preference number: 2 (lower is better)
Translates to: GENPWPWRWSWDLVRRLGSVPPA*ARIMAS
Trigger: TGATGCCATTATCCTGGCCCAGGCTGGGGGTACAGA...TCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GAGGACAGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGGGGACAAAGCCTGGTaGCATTTTGCCCAGCACTCC +
Preference number: 2 (lower is better)
Translates to: EDSLQDRHEAGHLAEAATGDKAW*HFAQHS
Trigger: GGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCC...TGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCTGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCTTATGGGGGACAAAGCCTaGTGGCATTTTGCCCAGCAC +
Preference number: 2 (lower is better)
Translates to: EKRLKAALQGLMLWGQLLMGDKA*WHFAQH
Trigger: GTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCAT...AAGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGATGGGGGACAAAGCCTaGTGGCATTTTGCCCAGCAC +
Preference number: 2 (lower is better)
Translates to: CKALLKASCIHTSGNLMEMGDKA*WHFAQH
Trigger: GTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCAT...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCTTGCTGAGCACAGTCCCTaGGTAGAAAGCTCATGGCAG +
Preference number: 2 (lower is better)
Translates to: EKRLKAALQGLMLWGQLLAEHSP*VESSWQ
Trigger: CTGCCATGAGCTTTCTACCCAGGGACTGTGCTCAGC...AAGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTCTACAGCCCGCCACCTaGGCATGCACTGCAAGGCCC +
Preference number: 2 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPLQPAT*ACTARP
Trigger: GGGCCTTGCAGTGCATGCCCAGGTGGCGGGCTGTAG...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCCAACTGCCTTGCCACTaGGGTGAGCAGAAGACAGAA +
Preference number: 2 (lower is better)
Translates to: ACTARPCSKLPASTHRATQLPCH*GEQKTE
Trigger: TTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTG...GGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTTCATTTCCCTTGGGCTaGGGACTCTCACCTAGCCCC +
Preference number: 2 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLSFPLG*GLSPSP
Trigger: GGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAAATGA...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGGTTGGCATACTGAGTaGCCCTGTAGGTTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPGWHTE*PCRLWQ
Trigger: CTGCCACAACCTACAGGGTCACTCAGTATGCCAACC...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp GTTCCGGCACAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCCGCAAGTCCCACAGCTaGATCACGGGAAGTCGATCA +
Preference number: 2 (lower is better)
Translates to: VPAQDLAVLSTSEQQLSIRKSHS*ITGSRS
Trigger: TGATCGACTTCCCGTGATTCAGCTGTGGGACTTGCG...GATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
3UTR-3UTR GCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATATTCCTCTCTTGGTTCTaGTCAGCACCCATCCCTCAC +
Preference number: 2 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDIFLSWF*SAPIPH
Trigger: GTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAA...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp CACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTGGAGTCAAGGGCAGGGGAGGTATCAGTGGTaGTTGTGCCACTTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: HRRNGLGLRLQHRWSQGQGRYQW*LCHLLW
Trigger: CCAGAGCAAGTGGCACAAGCACCACTGATACCTCCC...CTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR GCA 90 bp GAGGACAGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGGGAGGTATCAGTGGTaGTTGTGCCACTTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: EDSLQDRHEAGHLAEAATGRYQW*LCHLLW
Trigger: CCAGAGCAAGTGGCACAAGCACCACTGATACCTCCC...TGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGCGCGGGCTTCAGGAACTaGCACAGCATCTTTTCACTT +
Preference number: 2 (lower is better)
Translates to: ARPCSKLPASTHRATSWSAGFRN*HSIFSL
Trigger: AAGTGAAAAGATGCTGTGGCAGTTCCTGAAGCCCGC...GCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp AGGCTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTCTGCTCAAAGCTTCCTaGATCCACACATCGGGCAAC +
Preference number: 2 (lower is better)
Translates to: RLQHRWSQGQFPIGCGSPLLKAS*IHTSGN
Trigger: GTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAG...AGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR GCA 90 bp TTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGAGAATGTGTTGGGCTTaGCGGTTCCAAGACAGTGCC +
Preference number: 2 (lower is better)
Translates to: FPWAEDSHLAPRHSSTMWRMCWA*RFQDSA
Trigger: GGCACTGTCTTGGAACCGGCAAGCCCAACACATTCT...CCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp AGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGAGATCCCACACAACTaGCTTGCCACTGGGGTGAGC +
Preference number: 2 (lower is better)
Translates to: SRSSSEHSTNWVAMSGCQEIPHN*LATGVS
Trigger: GCTCACCCCAGTGGCAAGGCAGTTGTGTGGGATCTC...CTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
3UTR-3UTR GCA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTTCCCGAGGGCACCACTaGACATCAAAGCACCAGCTG +
Preference number: 2 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLSRGHH*TSKHQL
Trigger: CAGCTGGTGCTTTGATGTGCAGTGGTGCCCTCGGGA...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATAGGAACTTGCACCCTTTaGCCTCCTAATAGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDIGTCTL*PPNSCG
Trigger: GCCACAGCTATTAGGAGGGCAAAGGGTGCAAGTTCC...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR-3UTR CCA 90 bp TCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCAGGCCTGAGAGTGTCTTaGACAGATCCTAGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: SPAPSRARRQSASPTAESGLRVS*TDPRRP
Trigger: TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCC...TGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGAGGCTCCAACATAGGTaGAGTCAAGGGCAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: RQSFLSWFCSAPIPHVHERLQHR*SQGQFP
Trigger: GGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT...CTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp AGTGGCCTCCTAGCAAGAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGACCAAACCCCGGGCCCTaGTCTCCCAATCTCCAATAT +
Preference number: 2 (lower is better)
Translates to: SGLLAREAAWFRPAAYERPNPGP*SPNLQY
Trigger: ATATTGGAGATTGGGAGACCAGGGCCCGGGGTTTGG...TCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGCTAGGAGGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp CAAGCTCCTGTTAAGAACCATCACCTTCTCCATCAGGTCCTGCAGAGCCATGGGTTGTGCCACTTGCTCTaGCACCTGCAGTGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: QAPVKNHHLLHQVLQSHGLCHLL*HLQWWE
Trigger: CTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAA...CCCATGGCTCTGCAGGACCTGATGGAGAAGGTGATGGTTCTTAACAGGAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGCCACCTTCTTCTCAGGGGAGGTATCAGTaGTGCTTGTGCCACTTGCTC +
Preference number: 2 (lower is better)
Translates to: EDSHLAPRHSSTMWPPSSQGRYQ*CLCHLL
Trigger: GAGCAAGTGGCACAAGCACCACTGATACCTCCCCTG...AGAAGAAGGTGGCCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAAAGGCAAAGGCTGGATaGCCTGGGGCCCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPKAKAG*PGAQVP
Trigger: GGGCACCTGGGCCCCAGGCCATCCAGCCTTTGCCTT...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR CCA 90 bp TTCCTGCATCCACACATCGGGCAACCTCATGGAGCCCAGCCACGACATGAGGTGGGTGAGGCTCATAACTaGAGCAGTAATTGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: FLHPHIGQPHGAQPRHEVGEAHN*SSNWCW
Trigger: CCAGCACCAATTACTGCTCCAGTTATGAGCCTCACC...CACCTCATGTCGTGGCTGGGCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTACAGCACTAACTGGGTaGCTATGTCAGGATGCCAGG +
Preference number: 2 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPATALTG*LCQDAR
Trigger: CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGT...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR CAA 90 bp GAGTCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCTCCTaGCACCTGAGCTGTCTCTGGCGGGCTTCAGGAACTGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: ESCSKVTCLMYSLIS*HLSCLWRASGTATA
Trigger: TGCTGTGGCAGTTCCTGAAGCCCGCCAGAGACAGCTCAGGTGCAAGGAGATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp ATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACACACCCTGCCTCCAGGCCTaGGAGTGTCTTGGACAGATC +
Preference number: 2 (lower is better)
Translates to: MSVAKPVPLSSSSGYRYTPCLQA*ECLGQI
Trigger: GATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGG...TGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp GCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAATATCTGAGTTGTTCAAAGGGTaGACAGCAGTCAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: AGPSSPSRRAWLRSPSISELFKG*TAVSST
Trigger: GGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTC...AGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTGGGTCCCACGGTCCCTaGAATACTACAGGGCCCATC +
Preference number: 2 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPGSHGP*NTTGPI
Trigger: GATGGGCCCTGTAGTATTTCAGGGACCGTGGGACCC...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp GCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAATATCTGATTCTGTGGTGACTTaGCTGATGAAGACTAGGCGG +
Preference number: 2 (lower is better)
Translates to: AGPSSPSRRAWLRSPSISDSVVT*LMKTRR
Trigger: CCGCCTAGTCTTCATCAGTCAAGTCACCACAGAATC...AGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp ACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTCCTGCAGCTCAGCTaGTCGCATCAGGAATTCAGA +
Preference number: 2 (lower is better)
Translates to: TGSSVGEAPQSCSSRTDALLQLS*SHQEFR
Trigger: TCTGAATTCCTGATGCGATCAGCTGAGCTGCAGGAG...AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp CTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTCAGGGGTGAGGCTCGTGGCCACCTTCTTCTaGAGCTCATCTTTACTGTAT +
Preference number: 2 (lower is better)
Translates to: LETGGCEGRIPCSSGVRLVATFF*SSSLLY
Trigger: ATACAGTAAAGATGAGCTTCAGAAGAAGGTGGCCAC...GAGCCTCACCCCTGAGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCGTTGTCTGTCACTGTTaGGGTCATTTCCCTTGGGCT +
Preference number: 2 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLVVCHC*GHFPWA
Trigger: AGCCCAAGGGAAATGACCTCAACAGTGACAGACAAC...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp CTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTCAGGGGTGAGGCTCCATCAATATCTTTTGTaGTGGGGATCTCCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: LETGGCEGRIPCSSGVRLHQYLL*WGSPKE
Trigger: CTCCTTGGGAGATCCCCATCACAAAAGATATTGATG...GAGCCTCACCCCTGAGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp CAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCACCTAGAAACAGAATCTGTTaGAGAAGTCCCCTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: QPGSMTLTRSPCCGSPAPRNRIC*RSPLFC
Trigger: GCAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCT...AGGTGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCGAAGAACTGATTCTATaGCCTGCCTCCAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGEELIL*PASRPE
Trigger: CTCAGGCCTGGAGGCAGGGCATAGAATCAGTTCTTC...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GTTCCGGCACAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCGGGGAGAAGATATCCTaGCCCAGGTCCTTACAGAGT +
Preference number: 2 (lower is better)
Translates to: VPAQDLAVLSTSEQQLSIGEKIS*PRSLQS
Trigger: ACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCC...GATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAAGACAGTGCCACAAATaGAAATCCAATCGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPRQCHK*KSNRRR
Trigger: CCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCT...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR GCA 90 bp GAAGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCCCGGTTCCAAGACAGTaGCTTGATGTCCTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: EVDHPLSTALTGWLCQDAPVPRQ*LDVLWR
Trigger: CCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGG...GGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
3UTR-3UTR GCA 90 bp ATCACGGGAAGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCACCCACACAACTGCCTTaGCACTGGGGTGAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: ITGSRSSSEHSTNWVAMSPTQLP*HWGEQK
Trigger: CTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGGG...TGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTCCCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
3UTR-3UTR GCA 90 bp GAGCATGACTCACACTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTTATATACCACCTCACTaGTCCCCAGGTTCCGGCACA +
Preference number: 2 (lower is better)
Translates to: EHDSHWRQGAVREESLVAYIPPH*SPGSGT
Trigger: TGTGCCGGAACCTGGGGAGCAGTGAGGTGGTATATA...AGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCGTTCCCCATAGGCTGTaGTTCCCCTGCTCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: APVSQPKTASSKRQFIPFVPHRL*FPCSCL
Trigger: GAGACAGGAGCAGGGGAACCACAGCCTATGGGGAAC...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp CAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGAGGCCAAACCCCGGGCCCTaGTCTCCCAATCTCCAATAT +
Preference number: 2 (lower is better)
Translates to: QMQIQSEKVALRHVVAARPNPGP*SPNLQY
Trigger: ATATTGGAGATTGGGAGACCAGGGCCCGGGGTTTGG...CCTCGCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR CCA 90 bp TGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAGCATCGCCATCCTAAAGTaGCAGTTTAGTCAGGAACTC +
Preference number: 2 (lower is better)
Translates to: CRAMGDKAWWHFAQHSTSIAILK*QFSQEL
Trigger: GAGTTCCTGACTAAACTGCCACTTTAGGATGGCGAT...GCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp CTCTGGCGGGCTTCAGGAACTGCCACAGCATCTTTTCACTTTGCAGTAAAGCTTCTCTGGCACCTGCAGTaGTGGGAGAGGCTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: LWRASGTATASFHFAVKLLWHLQ*WERLAF
Trigger: AAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAG...AAGCTTTACTGCAAAGTGAAAAGATGCTGTGGCAGTTCCTGAAGCCCGCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATACCAAGCAGGAGAGCCTaGCTTAGGAGTCCATCAATA +
Preference number: 2 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDIPSRRA*LRSPSI
Trigger: TATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGG...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTGGCAGCTTGTTCCTCTaGAGGTTTCCCCTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPGSLFL*RFPLGA
Trigger: AGCCCCCAGGGGAAACCTCCAGAGGAACAAGCTGCC...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp AGGCTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGGTGAGGCTCATAACTaGAGCAGTAATTGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: RLQHRWSQGQFPIGCGSPGEAHN*SSNWCW
Trigger: CCAGCACCAATTACTGCTCCAGTTATGAGCCTCACC...AGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR CCA 90 bp AGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGAAGACAGAATGTGTTaGGCTTGCCGGTTCCAAGAC +
Preference number: 2 (lower is better)
Translates to: RLVPCCPPVPCEFPACHREDRMC*ACRFQD
Trigger: GTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC...TCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GTTCCGGCACAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCCAACTGCCTTGCCACTaGGGTGAGCAGAAGACAGAA +
Preference number: 2 (lower is better)
Translates to: VPAQDLAVLSTSEQQLSIQLPCH*GEQKTE
Trigger: TTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTG...GATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
3UTR-3UTR CCA 90 bp AGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGAACAGCACTAACTGGGTaGCTATGTCAGGATGCCAGG +
Preference number: 2 (lower is better)
Translates to: RVNSSQLYPRPWATEKYGTALTG*LCQDAR
Trigger: CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGT...TCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTAACAAAAGACCCACATaGTGGGTCACAGCAGAGGTA +
Preference number: 2 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPNKRPT*WVTAEV
Trigger: TACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTT...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp GCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTGTTGTCTGTCACTGTTaGGGTCATTTCCCTTGGGCT +
Preference number: 2 (lower is better)
Translates to: AALLFHASSQHVTELGKFVVCHC*GHFPWA
Trigger: AGCCCAAGGGAAATGACCTCAACAGTGACAGACAAC...AAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp TTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATGGGTTGGCATACTGAGTaGCCCTGTAGGTTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: LEMELGPGEKAGIPICKMGWHTE*PCRLWQ
Trigger: CTGCCACAACCTACAGGGTCACTCAGTATGCCAACC...CATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTAGCCACGACATGAGGTaGGAGTGTCCCCTCACAGAG +
Preference number: 2 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPSHDMR*ECPLTE
Trigger: CTCTGTGAGGGGACACTCTCACCTCATGTCGTGGCT...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTAGCTGGACACCTCGCTaGAGCTGCTACAGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: ILPQVLTECSIRESEELISWTPR*SCYSPP
Trigger: TGGCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCT...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATAAGAAGTCCCCTCTTCTaGAGGGAGGAGTTATGTAAC +
Preference number: 2 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDIRSPLF*REELCN
Trigger: GTTACATAACTCCTCCCTGCAGAAGAGGGGACTTCT...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp CAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGAGGGGGGAGAAGATATCCTaGCCCAGGTCCTTACAGAGT +
Preference number: 2 (lower is better)
Translates to: QMQIQSEKVALRHVVAARGEKIS*PRSLQS
Trigger: ACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCC...CCTCGCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR GCA 90 bp GGGCCCTGGTCTCCCAATCTCCAATATCTCCGCTTCTCAAGCCATATGTCTCTCTTCCTCTCTTGGTTCTaGTCAGCACCCATCCCTCAC +
Preference number: 2 (lower is better)
Translates to: GPWSPNLQYLRFSSHMSLFLSWF*SAPIPH
Trigger: GTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAA...GAGAGACATATGGCTTGAGAAGCGGAGATATTGGAGATTGGGAGACCAGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR GCA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTTATCAGTGGTGCTTGTaGCACTTGCTCTGGCACCTG +
Preference number: 2 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLYQWCL*HLLWHL
Trigger: CAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATA...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGGGGAGGTATCAGTGGTaGTTGTGCCACTTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRGRYQW*LCHLLW
Trigger: CCAGAGCAAGTGGCACAAGCACCACTGATACCTCCC...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCGGGAGGTATCAGTGGTaGTTGTGCCACTTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: APVSQPKTASSKRQFIPFGRYQW*LCHLLW
Trigger: CCAGAGCAAGTGGCACAAGCACCACTGATACCTCCC...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp AGGCTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTTTCATTCTGGAGTCTTaGTCTAAGGTCACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: RLQHRWSQGQFPIGCGSPFILES*SKVTCL
Trigger: CAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAA...AGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR GCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCTTCATTCTGGAGTCTTaGTCTAAGGTCACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLFILES*SKVTCL
Trigger: CAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAA...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp AAGGAGTCATGTTCTGAGGGACCAGCTCATCAAAGAAGGCTGAGGAAGCAGAGGGTTTGGAGGCCTGGCTaGAGAAGGCCTGTTGTCTGT +
Preference number: 2 (lower is better)
Translates to: KESCSEGPAHQRRLRKQRVWRPG*RRPVVC
Trigger: ACAGACAACAGGCCTTCTGCAGCCAGGCCTCCAAAC...CCTCTGCTTCCTCAGCCTTCTTTGATGAGCTGGTCCCTCAGAACATGACTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp CGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGGAAGCGCCTCAAAGCTaGTCTTCAAGGACTGATGCT +
Preference number: 2 (lower is better)
Translates to: RQSFLSWFCSAPIPHVHEEAPQS*SSRTDA
Trigger: AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTC...CTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGTCACCTTCAGGAACTaGCACAGCATCTTTTCACTT +
Preference number: 2 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPVTFRN*HSIFSL
Trigger: AAGTGAAAAGATGCTGTGGCAGTTCCTGAAGGTGAC...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469546.6
3UTR-3UTR CCA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAACAGCATCACATACCTaGCAGCAAGGAAAAGAGTCG +
Preference number: 2 (lower is better)
Translates to: AGTQLVWSQAYSITYLAATASHT*QQGKES
Trigger: CGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGT...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTAAGCAGGCACTCAGCTaGTTTGGAGCCAAGCCTACA +
Preference number: 2 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLKQALS*FGAKPT
Trigger: TGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGCTT...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GGGCCCTGGTCTCCCAATCTCCAATATCTCCGCTTCTCAAGCCATATGTCTCTCGGCCTGAGAGTGTCTTaGACAGATCCTAGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: GPWSPNLQYLRFSSHMSLGLRVS*TDPRRP
Trigger: TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCC...GAGAGACATATGGCTTGAGAAGCGGAGATATTGGAGATTGGGAGACCAGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp CACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTGGAGTCAAGGGCAGATCCTTTCAGGAAGATaGGCACTAGGGCAAAGGTGC +
Preference number: 2 (lower is better)
Translates to: HRRNGLGLRLQHRWSQGQILSGR*ALGQRC
Trigger: GCACCTTTGCCCTAGTGCCCATCTTCCTGAAAGGAT...CTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGCAGAGGCTTCCTTTGTaGTGTGTTTGGAGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRQRLPL*CVWRPG
Trigger: GCCAGGCCTCCAAACACACCACAAAGGAAGCCTCTG...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATAAGCAGTAATTGGTGCTaGGGGCATAAATGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDISSNWC*GHKCLW
Trigger: CCAGAGACATTTATGCCCCCAGCACCAATTACTGCT...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGCTGGAGGCTGTGACTTaGATCCCAGGGTCATTGGCA +
Preference number: 2 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRLEAVT*IPGSLA
Trigger: TGCCAATGACCCTGGGATCCAAGTCACAGCCTCCAG...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482456.6
3UTR-3UTR CCA 90 bp GGGCCCTGGTCTCCCAATCTCCAATATCTCCGCTTCTCAAGCCATATGTCTCTCCAACTGCCTTGCCACTaGGGTGAGCAGAAGACAGAA +
Preference number: 2 (lower is better)
Translates to: GPWSPNLQYLRFSSHMSLQLPCH*GEQKTE
Trigger: TTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTG...GAGAGACATATGGCTTGAGAAGCGGAGATATTGGAGATTGGGAGACCAGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR-3UTR CCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGAAGATCCCCCTGCTGTaGCTCTCCAGCACCTTCAAG +
Preference number: 2 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRKIPLL*LSSTFK
Trigger: CTTGAAGGTGCTGGAGAGCCACAGCAGGGGGATCTT...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GAGCATGACTCACACTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTTTCCGGCACAAGATCTaGCTGTCCTTAGCACTAGTG +
Preference number: 2 (lower is better)
Translates to: EHDSHWRQGAVREESLVAFRHKI*LSLALV
Trigger: CACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAA...AGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGGAGGCTGCTGTGACTTaGATCCCAGGGTCATTGGCA +
Preference number: 2 (lower is better)
Translates to: LRSHLNRRSLGEKISCPREAAVT*IPGSLA
Trigger: TGCCAATGACCCTGGGATCCAAGTCACAGCAGCCTC...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR-3UTR CCA 90 bp AGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGAGTCCATCAATATCTaGCTGCAGAAGGCCTGTTGT +
Preference number: 2 (lower is better)
Translates to: RLVPCCPPVPCEFPACHRESINI*LQKACC
Trigger: ACAACAGGCCTTCTGCAGCCAGATATTGATGGACTC...TCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469546.6
3UTR-3UTR TCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCTTGAGACACCCAATTTaGCCTAGAAAGGTCAGACTC +
Preference number: 2 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLLRHPI*PRKVRL
Trigger: GAGTCTGACCTTTCTAGGTCAAATTGGGTGTCTCAA...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTTTTGGGAGGAATCCTTaGGACACCCAATTTGACCTA +
Preference number: 2 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPAFGRNP*DTQFDL
Trigger: TAGGTCAAATTGGGTGTCTCAAGGATTCCTCCCAAA...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTGATTCTGTGGTGACTTaGCTGATGAAGACTAGGCGG +
Preference number: 2 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLDSVVT*LMKTRR
Trigger: CCGCCTAGTCTTCATCAGTCAAGTCACCACAGAATC...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTCCGCTCCACACTCCCTaGGCACACATAACAGAGTCT +
Preference number: 2 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPPLHTP*AHITES
Trigger: AGACTCTGTTATGTGTGCTCAGGGAGTGTGGAGCGG...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTGGAGTTGGGACCTGGTaGGAAGGCTGGGATCCCAAT +
Preference number: 2 (lower is better)
Translates to: AALEENHSLIWLQFQNWAGVGTW*EGWDPN
Trigger: ATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCC...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTGTGATGACTGAGGGGTaGAAACCCTTGGCCTTGGAG +
Preference number: 2 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPVMTEG*KPLALE
Trigger: CTCCAAGGCCAAGGGTTTTCACCCCTCAGTCATCAC...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTTCCAAGACAGTGCCTTaGTGTCCTCTGGAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPSKTVP*CPLEAV
Trigger: CACAGCCTCCAGAGGACATCAAGGCACTGTCTTGGA...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482456.6
3UTR-3UTR GCA 90 bp GCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTAGAAGTCCCCTCTTCTaGAGGGAGGAGTTATGTAAC +
Preference number: 2 (lower is better)
Translates to: AALLFHASSQHVTELGKFRSPLF*REELCN
Trigger: GTTACATAACTCCTCCCTGCAGAAGAGGGGACTTCT...AAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGAAACAGAATCTGTTaGAGAAGTCCCCTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: AGTQLVWSQAYSITYLAARNRIC*RSPLFC
Trigger: GCAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCT...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAATATCTAGAAACAGAATCTGTTaGAGAAGTCCCCTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: AGPSSPSRRAWLRSPSISRNRIC*RSPLFC
Trigger: GCAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCT...AGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp TCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACACACCAGAAGAACTGATTCTATaGCCTGCCTCCAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: SVAKPVPLSSSSGYRYTPEELIL*PASRPE
Trigger: CTCAGGCCTGGAGGCAGGGCATAGAATCAGTTCTTC...TGGTGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp ACCACATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGGCACTAGGGCAAAGGTaGAGCCCTCCCAAACCCCGG +
Preference number: 2 (lower is better)
Translates to: TTSFQFFCTTQARSEEILALGQR*SPPKPR
Trigger: CCGGGGTTTGGGAGGGCTGCACCTTTGCCCTAGTGC...CAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR GCA 90 bp AATTTCTCTGTGCCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCGATCCCAAGGCCTCCTaGAGCTCAGCTGATCGCATC +
Preference number: 2 (lower is better)
Translates to: NFSVPEYVSSKASASLQFDPKAS*SSADRI
Trigger: GATGCGATCAGCTGAGCTGCAGGAGGCCTTGGGATC...GAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCATCCTTCCAATTCTTTTaGACAACACAGGCTAGAAGC +
Preference number: 2 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPSFQFF*TTQARS
Trigger: GCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGA...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCCTTCCAATTCTTTTaGACAACACAGGCTAGAAGC +
Preference number: 2 (lower is better)
Translates to: ACTARPCSKLPASTHRATSFQFF*TTQARS
Trigger: GCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGA...GGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCCTGCTCAAAGCTTCCTaGATCCACACATCGGGCAAC +
Preference number: 2 (lower is better)
Translates to: APVSQPKTASSKRQFIPFLLKAS*IHTSGN
Trigger: GTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAG...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCTTCATCAAAGCACCAGCTaGTCTGTGTTGGTAGCTTAT +
Preference number: 2 (lower is better)
Translates to: EKRLKAALQGLMLWGQLLHQSTS*SVLVAY
Trigger: ATAAGCTACCAACACAGAGCAGCTGGTGCTTTGATG...AAGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp TCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGTTGTTCAAAGGGTAAGCAGGCACTCAGCTaGTTTGGAGCCAAGCCTACA +
Preference number: 2 (lower is better)
Translates to: SLGSAQHPSLTSMSCSKGKQALS*FGAKPT
Trigger: TGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGCTT...ACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp TTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATGGGCCTGAGAGTGTCTTaGACAGATCCTAGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: LEMELGPGEKAGIPICKMGLRVS*TDPRRP
Trigger: TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCC...CATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCGCCTTCTTCACATTGTaGCAGAAACTAACATCCTTT +
Preference number: 2 (lower is better)
Translates to: PSGPAEPWGTKPGGILPSAFFTL*QKLTSF
Trigger: AAAGGATGTTAGTTTCTGCCACAATGTGAAGAAGGC...GCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp AGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTGTGCCACTTGCTCTaGCACCTGCAGTGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: SSAGRESFLNMAPIPELGLCHLL*HLQWWE
Trigger: CTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAA...GCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR CCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCTTTTGGTTTTCTTCTTaGCCAAGTAGCGCTCCTGTG +
Preference number: 2 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLFWFSS*PSSAPV
Trigger: CACAGGAGCGCTACTTGGCCAAGAAGAAAACCAAAA...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCACAGGCTGAGTTCTCCTaGAACTCCTGGGGGAGCATG +
Preference number: 2 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSQAEFS*NSWGSM
Trigger: CATGCTCCCCCAGGAGTTCCAGGAGAACTCAGCCTG...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp AGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTGCCTGGGCATGCCATaGGTAGAGGGGAACCAGGAA +
Preference number: 2 (lower is better)
Translates to: SSAGRESFLNMAPIPELGCLGMP*VEGNQE
Trigger: TTCCTGGTTCCCCTCTACCCATGGCATGCCCAGGCA...GCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR-3UTR CCA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAACAAGATGCCAGTGGTTaGGAGGACACTAGAGCATGG +
Preference number: 2 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKQDASG*EDTRAW
Trigger: CCATGCTCTAGTGTCCTCCCAACCACTGGCATCTTG...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR CAA 90 bp GAGTCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCTCCTaGCACCTGAGCTGTCTCTGGCGGGCTTTCTTCCTTCAGATCTCT +
Preference number: 2 (lower is better)
Translates to: ESCSKVTCLMYSLIS*HLSCLWRAFFLQIS
Trigger: AGAGATCTGAAGGAAGAAAGCCCGCCAGAGACAGCTCAGGTGCAAGGAGATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR-3UTR TCA 90 bp TTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATGGAGTTGTTCAAAGGGTaGACAGCAGTCAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: LEMELGPGEKAGIPICKMELFKG*TAVSST
Trigger: GGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTC...CATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGGTTGTCTGTCACTGTTaGGGTCATTTCCCTTGGGCT +
Preference number: 2 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRVVCHC*GHFPWA
Trigger: AGCCCAAGGGAAATGACCTCAACAGTGACAGACAAC...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp ACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCATCAATATCTTTTGTaGTGGGGATCTCCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: TGSSVGEAPQSCSSRTDAHQYLL*WGSPKE
Trigger: CTCCTTGGGAGATCCCCATCACAAAAGATATTGATG...AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTTCAGGTGGCAGGTGCTaGAGCTGCAGGCTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: KDSATNANPIGEGSPETCSGGRC*SCRLSS
Trigger: AGAACTCAGCCTGCAGCTTCAGCACCTGCCACCTGA...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR TCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTGTCCTCTGGAGGCTGTaGCTTGGATCCCAGGGTCAT +
Preference number: 2 (lower is better)
Translates to: ILPQVLTECSIRESEELIVLWRL*LGSQGH
Trigger: ATGACCCTGGGATCCAAGTCACAGCCTCCAGAGGAC...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482456.6
3UTR-3UTR GCA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGGAAGAACTGATTCTATaGCCTGCCTCCAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: LGYREIRTWKYQVRGREKEELIL*PASRPE
Trigger: CTCAGGCCTGGAGGCAGGGCATAGAATCAGTTCTTC...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp AGCGAGGGTGGGACTCCCATGCAAGTAGGCTCTTGGAAAGACTACTACATTCAAGGGGAGAAGATATCCTaGCCCAGGTCCTTACAGAGT +
Preference number: 2 (lower is better)
Translates to: SEGGTPMQVGSWKDYYIQGEKIS*PRSLQS
Trigger: ACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCC...TTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCATGGGAGTCCCACCCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR GCA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAAGGTGCTTGTGCCACTTaGTCTGGCACCTGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKGACAT*SGTCSG
Trigger: ACCACTGCAGGTGCCAGAGCAAGTGGCACAAGCACC...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp AATTTCTCTGTGCCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCGTTTGGAGGCCTGGCTaGAGAAGGCCTGTTGTCTGT +
Preference number: 2 (lower is better)
Translates to: NFSVPEYVSSKASASLQFVWRPG*RRPVVC
Trigger: ACAGACAACAGGCCTTCTGCAGCCAGGCCTCCAAAC...GAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCTTTCCTTCCAATTCTTTTaGACAACACAGGCTAGAAGC +
Preference number: 2 (lower is better)
Translates to: EKRLKAALQGLMLWGQLLSFQFF*TTQARS
Trigger: GCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGA...AAGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTCCGGTTCCAAGACAGTaGCTTGATGTCCTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: AALEENHSLIWLQFQNWAPVPRQ*LDVLWR
Trigger: CCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGG...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR-3UTR GCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTCCCACACAACTGCCTTaGCACTGGGGTGAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: ILPQVLTECSIRESEELIPTQLP*HWGEQK
Trigger: CTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGGG...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTATATATACCACCTCACTaGTCCCCAGGTTCCGGCACA +
Preference number: 2 (lower is better)
Translates to: EYVSSKASASLQFFRLQVYIPPH*SPGSGT
Trigger: TGTGCCGGAACCTGGGGAGCAGTGAGGTGGTATATA...TACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCAGGCACTCAGCTGGTTTaGAGCCAAGCCTACAGCATC +
Preference number: 2 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSGTQLV*SQAYSI
Trigger: GATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCC...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCAATCATTCCTTAATATaGCTCCAATTCCAGAACTGG +
Preference number: 2 (lower is better)
Translates to: PSGPAEPWGTKPGGILPSNHSLI*LQFQNW
Trigger: CCAGTTCTGGAATTGGAGCCATATTAAGGAATGATT...GCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp CAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCATGCAAGTAGGCTCTTaGAAAGACTACTACATTCAA +
Preference number: 2 (lower is better)
Translates to: QVLQSHGGQSLVAFCPALMQVGS*KDYYIQ
Trigger: TTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCAT...GAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCACTACAAACTCCATTTTaGGAGGAATCCTTGAGACAC +
Preference number: 2 (lower is better)
Translates to: AGTQLVWSQAYSITYLAALQTPF*EESLRH
Trigger: GTGTCTCAAGGATTCCTCCCAAAATGGAGTTTGTAG...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp AATTTCTCTGTGCCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCCAGGGGAGGTATCAGTaGTGCTTGTGCCACTTGCTC +
Preference number: 2 (lower is better)
Translates to: NFSVPEYVSSKASASLQFQGRYQ*CLCHLL
Trigger: GAGCAAGTGGCACAAGCACCACTGATACCTCCCCTG...GAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp TGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAGCTTAGGAATTTCATTCTaGAGTCTTGCTCTAAGGTCA +
Preference number: 2 (lower is better)
Translates to: CRAMGDKAWWHFAQHSTSLGISF*SLALRS
Trigger: TGACCTTAGAGCAAGACTCCAGAATGAAATTCCTAA...GCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CAAGCTCCTGTTAAGAACCATCACCTTCTCCATCAGGTCCTGCAGAGCCATGGGCACTCTTCAACCATGTaGCCACCTTCTTCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: QAPVKNHHLLHQVLQSHGHSSTM*PPSSEA
Trigger: AGCTTCAGAAGAAGGTGGCCACATGGTTGAAGAGTG...CCCATGGCTCTGCAGGACCTGATGGAGAAGGTGATGGTTCTTAACAGGAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTGAAAACCCTTGGCCTTaGAGATGGAGTTGGGACCTG +
Preference number: 2 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPENPWP*RWSWDL
Trigger: CAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTC...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGGGGCATAAATGTCTCTaGCAGCTTGTTCCTCTGGAG +
Preference number: 2 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRGHKCL*QLVPLE
Trigger: CTCCAGAGGAACAAGCTGCCAGAGACATTTATGCCC...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTCAGGCTGAGTTCTCCTaGAACTCCTGGGGGAGCATG +
Preference number: 2 (lower is better)
Translates to: ILPQVLTECSIRESEELIQAEFS*NSWGSM
Trigger: CATGCTCCCCCAGGAGTTCCAGGAGAACTCAGCCTG...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp AGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCAGAAGTCCCCTCTTCTaGAGGGAGGAGTTATGTAAC +
Preference number: 2 (lower is better)
Translates to: SATNANPIGEGSPETCGGRSPLF*REELCN
Trigger: GTTACATAACTCCTCCCTGCAGAAGAGGGGACTTCT...GCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR GCA 90 bp TCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGTTGTTCAAAGGGTAGAAGTCCCCTCTTCTaGAGGGAGGAGTTATGTAAC +
Preference number: 2 (lower is better)
Translates to: SLGSAQHPSLTSMSCSKGRSPLF*REELCN
Trigger: GTTACATAACTCCTCCCTGCAGAAGAGGGGACTTCT...ACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGGGGAGAAGATATCCTaGCCCAGGTCCTTACAGAGT +
Preference number: 2 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPGEKIS*PRSLQS
Trigger: ACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCC...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR GCA 90 bp GCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTTCCTTCCAATTCTTTTaGACAACACAGGCTAGAAGC +
Preference number: 2 (lower is better)
Translates to: AALLFHASSQHVTELGKFSFQFF*TTQARS
Trigger: GCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGA...AAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTAGAATGTGTTGGGCTTaGCGGTTCCAAGACAGTGCC +
Preference number: 2 (lower is better)
Translates to: AALEENHSLIWLQFQNWARMCWA*RFQDSA
Trigger: GGCACTGTCTTGGAACCGGCAAGCCCAACACATTCT...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR-3UTR CCA 90 bp GGTCCCACGGTCCCTGAAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTACAGCATCACATACCTaGCAGCAAGGAAAAGAGTCG +
Preference number: 2 (lower is better)
Translates to: GPTVPEILQGPSNNKSQGTASHT*QQGKES
Trigger: CGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGT...ACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTTCAGGGACCGTGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp GAATCACGGGAAGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTACAGCATCACATACCTaGCAGCAAGGAAAAGAGTCG +
Preference number: 2 (lower is better)
Translates to: ESREVDHPLSTALTGWLCTASHT*QQGKES
Trigger: CGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGT...ACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTCCCGTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGGCCTGAGAGTGTCTTaGACAGATCCTAGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: GEDILPQVLTECSIRESEGLRVS*TDPRRP
Trigger: TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCC...TTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp AAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACAGTTCCCCATAGGCTGTaGTTCCCCTGCTCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: KYYRAHPITRVKVKAFFTVPHRL*FPCSCL
Trigger: GAGACAGGAGCAGGGGAACCACAGCCTATGGGGAAC...TGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTGCCTTCTTCACATTGTaGCAGAAACTAACATCCTTT +
Preference number: 2 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPAAFFTL*QKLTSF
Trigger: AAAGGATGTTAGTTTCTGCCACAATGTGAAGAAGGC...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp GCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGCGAGTGTGGCACAAAATaGATCTATAGAAGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: ARPCSKLPASTHRATSWSECGTK*IYRREK
Trigger: TTTCTCTCTTCTATAGATCCATTTTGTGCCACACTC...GCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTAAGATCCCCCTGCTGTaGCTCTCCAGCACCTTCAAG +
Preference number: 2 (lower is better)
Translates to: ILPQVLTECSIRESEELIKIPLL*LSSTFK
Trigger: CTTGAAGGTGCTGGAGAGCCACAGCAGGGGGATCTT...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp TGCATCAAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGGAGTTGTTCAAAGGGTaGACAGCAGTCAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: CIKDSATNANPIGEGSPEELFKG*TAVSST
Trigger: GGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTC...CTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTTGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR TCA 90 bp AATTTCTCTGTGCCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCGAGTTGTTCAAAGGGTaGACAGCAGTCAGCTCTACC +
Preference number: 2 (lower is better)
Translates to: NFSVPEYVSSKASASLQFELFKG*TAVSST
Trigger: GGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTC...GAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp TTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATGTTTGGGAGGAATCCTTaGGACACCCAATTTGACCTA +
Preference number: 2 (lower is better)
Translates to: LEMELGPGEKAGIPICKMFGRNP*DTQFDL
Trigger: TAGGTCAAATTGGGTGTCTCAAGGATTCCTCCCAAA...CATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCTTTGGGAGGAATCCTTaGGACACCCAATTTGACCTA +
Preference number: 2 (lower is better)
Translates to: APVSQPKTASSKRQFIPFFGRNP*DTQFDL
Trigger: TAGGTCAAATTGGGTGTCTCAAGGATTCCTCCCAAA...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp CATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGGTTTGAGGCTGGCCTTTGCTaGAGGAAGAGGAGATCTGGG +
Preference number: 2 (lower is better)
Translates to: HPSNSFAQHRLEARRFWFEAGLC*RKRRSG
Trigger: CCCAGATCTCCTCTTCCTTCAGCAAAGGCCAGCCTC...AAACCAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR GCA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTTTCCTCTCTTGGTTCTaGTCAGCACCCATCCCTCAC +
Preference number: 2 (lower is better)
Translates to: KDSATNANPIGEGSPETCFLSWF*SAPIPH
Trigger: GTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAA...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR GCA 90 bp AAGGAGTCATGTTCTGAGGGACCAGCTCATCAAAGAAGGCTGAGGAAGCAGAGGAGACAGTGCCACAAATaGAAATCCAATCGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: KESCSEGPAHQRRLRKQRRQCHK*KSNRRR
Trigger: CCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCT...CCTCTGCTTCCTCAGCCTTCTTTGATGAGCTGGTCCCTCAGAACATGACTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR GCA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCATCGAAGCAGCTTTATTaGACCATTAAGTACATCACT +
Preference number: 2 (lower is better)
Translates to: AGTQLVWSQAYSITYLAASKQLY*TIKYIT
Trigger: AGTGATGTACTTAATGGTGCAATAAAGCTGCTTCGA...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR CCA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTAAGCAGGCACTCAGCTaGTTTGGAGCCAAGCCTACA +
Preference number: 2 (lower is better)
Translates to: KDSATNANPIGEGSPETCKQALS*FGAKPT
Trigger: TGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGCTT...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR CCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTGGCCTGAGAGTGTCTTaGACAGATCCTAGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: ILPQVLTECSIRESEELIGLRVS*TDPRRP
Trigger: TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCC...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATAGAGTGTGGCACAAAATaGATCTATAGAAGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDIECGTK*IYRREK
Trigger: TTTCTCTCTTCTATAGATCCATTTTGTGCCACACTC...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp AATTTCATTCTGGAGTCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCTTGTGCCACTTGCTCTaGCACCTGCAGTGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: NFILESCSKVTCLMYSLILCHLL*HLQWWE
Trigger: CTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAA...GATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTAAAGGGGGAGACTGTTaGCCCAAGACAGCAGAACCT +
Preference number: 2 (lower is better)
Translates to: KDSATNANPIGEGSPETCKGGDC*PKTAEP
Trigger: AGGTTCTGCTGTCTTGGGCCAACAGTCTCCCCCTTT...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR CCA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAATTCTCCTGGAACTCCTaGGGGAGCATGACTCACACT +
Preference number: 2 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKFSWNS*GSMTHT
Trigger: AGTGTGAGTCATGCTCCCCCAGGAGTTCCAGGAGAA...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR CAA 90 bp CACCTGAGCTGTCTCTGGCGGGCTTTCTTCCTTCAGATCTCTCACTaGCTCATTTCCTTTGATAGGTATAGTACTCCTCCTTCAGGAACT +
Preference number: 2 (lower is better)
Translates to: HLSCLWRAFFLQISH*LISFDRYSTPPSGT
Trigger: AGTTCCTGAAGGAGGAGTACTATACCTATCAAAGGAAATGAGCAAGTGAGAGATCTGAAGGAAGAAAGCCCGCCAGAGACAGCTCAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR-3UTR TCA 90 bp ATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACACATTGAGACACCCAATTTaGCCTAGAAAGGTCAGACTC +
Preference number: 2 (lower is better)
Translates to: MSVAKPVPLSSSSGYRYTLRHPI*PRKVRL
Trigger: GAGTCTGACCTTTCTAGGTCAAATTGGGTGTCTCAA...TGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp GGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCATCGAGGCTGGCCTTTGCTaGAGGAAGAGGAGATCTGGG +
Preference number: 2 (lower is better)
Translates to: GRESFLNMAPIPELGFIIEAGLC*RKRRSG
Trigger: CCCAGATCTCCTCTTCCTTCAGCAAAGGCCAGCCTC...GATGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp ACCACATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGCTCCTGCAGCTCAGCTaGTCGCATCAGGAATTCAGA +
Preference number: 2 (lower is better)
Translates to: TTSFQFFCTTQARSEEILLLQLS*SHQEFR
Trigger: TCTGAATTCCTGATGCGATCAGCTGAGCTGCAGGAG...CAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCAAGAAGTCCCCTCTTCTaGAGGGAGGAGTTATGTAAC +
Preference number: 2 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSRSPLF*REELCN
Trigger: GTTACATAACTCCTCCCTGCAGAAGAGGGGACTTCT...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp TCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCTCCTTGCACCTGAGCAGAAACAGAATCTGTTaGAGAAGTCCCCTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: SCSKVTCLMYSLISLHLSRNRIC*RSPLFC
Trigger: GCAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCT...GCTCAGGTGCAAGGAGATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp AAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACATTCCTCTCTTGGTTCTaGTCAGCACCCATCCCTCAC +
Preference number: 2 (lower is better)
Translates to: KYYRAHPITRVKVKAFFTFLSWF*SAPIPH
Trigger: GTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAA...TGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR GCA 90 bp TTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATGAGCATCTTTTCACTTTaGAGTAAAGCTTGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: LEMELGPGEKAGIPICKMSIFSL*SKACWL
Trigger: GAGCCAGCAAGCTTTACTGCAAAGTGAAAAGATGCT...CATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCATTCATTCTGGAGTCTTaGTCTAAGGTCACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSFILES*SKVTCL
Trigger: CAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAA...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp TCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCTCCTTGCACCTGAGCCGGGAAATTTCTCTGTaGCTGAGTATGTCAGTAGCA +
Preference number: 2 (lower is better)
Translates to: SCSKVTCLMYSLISLHLSREISL*LSMSVA
Trigger: TGCTACTGACATACTCAGGCACAGAGAAATTTCCCG...GCTCAGGTGCAAGGAGATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp ATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACACATTCATTCTGGAGTCTTaGTCTAAGGTCACCTTCAGG +
Preference number: 2 (lower is better)
Translates to: MSVAKPVPLSSSSGYRYTFILES*SKVTFR
Trigger: CCTGAAGGTGACCTTAGAGCAAGACTCCAGAATGAA...TGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469546.6
3UTR-3UTR CCA 90 bp GAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGCCACCTTCTTCTGAGTGTGGCACAAAATaGATCTATAGAAGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: EDSHLAPRHSSTMWPPSSECGTK*IYRREK
Trigger: TTTCTCTCTTCTATAGATCCATTTTGTGCCACACTC...AGAAGAAGGTGGCCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp CACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTGGAGTCAAGGGCAGATGCAAGTAGGCTCTTaGAAAGACTACTACATTCAA +
Preference number: 2 (lower is better)
Translates to: HRRNGLGLRLQHRWSQGQMQVGS*KDYYIQ
Trigger: TTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCAT...CTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp CTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCCTACAAACTCCATTTTaGGAGGAATCCTTGAGACAC +
Preference number: 2 (lower is better)
Translates to: LVWSQAYSITYLAARKRVLQTPF*EESLRH
Trigger: GTGTCTCAAGGATTCCTCCCAAAATGGAGTTTGTAG...GACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp ACCACATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGCAAGGAGTCATGTTCTaGGGGACCAGCTCATCAAAG +
Preference number: 2 (lower is better)
Translates to: TTSFQFFCTTQARSEEILQGVMF*GTSSSK
Trigger: CTTTGATGAGCTGGTCCCTCAGAACATGACTCCTTG...CAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR TCA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTCATCAATATCTTTTGTaGTGGGGATCTCCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: AALEENHSLIWLQFQNWAHQYLL*WGSPKE
Trigger: CTCCTTGGGAGATCCCCATCACAAAAGATATTGATG...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR TCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTTCCCAATCTGTAAGATaGTGTCTCTTTAGAGTGGAG +
Preference number: 2 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPSQSVR*CLFRVE
Trigger: CTCCACTCTAAAGAGACATCATCTTACAGATTGGGA...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTACAGCATCACATACCTaGCAGCAAGGAAAAGAGTCG +
Preference number: 2 (lower is better)
Translates to: ILPQVLTECSIRESEELITASHT*QQGKES
Trigger: CGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGT...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGGTTTAAGCAGGCACTCAGCTaGTTTGGAGCCAAGCCTACA +
Preference number: 2 (lower is better)
Translates to: HPSNSFAQHRLEARRFWFKQALS*FGAKPT
Trigger: TGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGCTT...AAACCAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp AGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCCTTTCAGGAAGATaGGCACTAGGGCAAAGGTGC +
Preference number: 2 (lower is better)
Translates to: SAGRESFLNMAPIPELGFILSGR*ALGQRC
Trigger: GCACCTTTGCCCTAGTGCCCATCTTCCTGAAAGGAT...AAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTATGCAAGTAGGCTCTTaGAAAGACTACTACATTCAA +
Preference number: 2 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLMQVGS*KDYYIQ
Trigger: TTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCAT...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp GAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACTACAAACTCCATTTTaGGAGGAATCCTTGAGACAC +
Preference number: 2 (lower is better)
Translates to: EYVSSKASASLQFFRLQVLQTPF*EESLRH
Trigger: GTGTCTCAAGGATTCCTCCCAAAATGGAGTTTGTAG...TACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CCA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCAAACTGGAGCAGTAATTaGTGCTGGGGGCATAAATGT +
Preference number: 2 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSNWSSN*CWGHKC
Trigger: ACATTTATGCCCCCAGCACCAATTACTGCTCCAGTT...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp AAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACAGAAGACAGAATGTGTTaGGCTTGCCGGTTCCAAGAC +
Preference number: 2 (lower is better)
Translates to: KYYRAHPITRVKVKAFFTEDRMC*ACRFQD
Trigger: GTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC...TGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR-3UTR TCA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAAGTGGCCACCTTCTTCTaGAGCTCATCTTTACTGTAT +
Preference number: 2 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKVATFF*SSSLLY
Trigger: ATACAGTAAAGATGAGCTTCAGAAGAAGGTGGCCAC...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp GGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCATCTATCAGTGGTGCTTGTaGCACTTGCTCTGGCACCTG +
Preference number: 2 (lower is better)
Translates to: GRESFLNMAPIPELGFIIYQWCL*HLLWHL
Trigger: CAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATA...GATGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR GCA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCAAGCATCTTTTCACTTTaGAGTAAAGCTTGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSSIFSL*SKACWL
Trigger: GAGCCAGCAAGCTTTACTGCAAAGTGAAAAGATGCT...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAATGCTCTAAGGTCACCTaGCTGATGTATAGTCTCATC +
Preference number: 2 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKCSKVT*LMYSLI
Trigger: GATGAGACTATACATCAGGCAGGTGACCTTAGAGCA...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CCA 90 bp CTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCAATCCTTTCAGGAAGATaGGCACTAGGGCAAAGGTGC +
Preference number: 2 (lower is better)
Translates to: LEENHSLIWLQFQNWALSILSGR*ALGQRC
Trigger: GCACCTTTGCCCTAGTGCCCATCTTCCTGAAAGGAT...TGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp ATTCAAAGTCTACAATGGAGTGTGGCACAAAATGGATCTATAGAAGAGAGAAAGCTCCTGCAGCTCAGCTaGTCGCATCAGGAATTCAGA +
Preference number: 2 (lower is better)
Translates to: IQSLQWSVAQNGSIEERKLLQLS*SHQEFR
Trigger: TCTGAATTCCTGATGCGATCAGCTGAGCTGCAGGAG...CTTTCTCTCTTCTATAGATCCATTTTGTGCCACACTCCATTGTAGACTTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR TCA 90 bp CATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGGTTTGTGGCCACCTTCTTCTaGAGCTCATCTTTACTGTAT +
Preference number: 2 (lower is better)
Translates to: HPSNSFAQHRLEARRFWFVATFF*SSSLLY
Trigger: ATACAGTAAAGATGAGCTTCAGAAGAAGGTGGCCAC...AAACCAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp ATTCAAAGTCTACAATGGAGTGTGGCACAAAATGGATCTATAGAAGAGAGAAAGGGGGGAAAAGACACCTaGATCGCCATCCTAAAGTGG +
Preference number: 2 (lower is better)
Translates to: IQSLQWSVAQNGSIEERKGGKDT*IAILKW
Trigger: CCACTTTAGGATGGCGATGCAGGTGTCTTTTCCCCC...CTTTCTCTCTTCTATAGATCCATTTTGTGCCACACTCCATTGTAGACTTTGAAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR GCA 90 bp AATTTCATTCTGGAGTCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCCGGGAAATTTCTCTGTaGCTGAGTATGTCAGTAGCA +
Preference number: 2 (lower is better)
Translates to: NFILESCSKVTCLMYSLIREISL*LSMSVA
Trigger: TGCTACTGACATACTCAGGCACAGAGAAATTTCCCG...GATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR GCA 90 bp ATTGCACCATTAAGTACATCACTGCATCAAAGACAGTGCCACAAATGCAAATCCAGAAACAGAATCTGTTaGAGAAGTCCCCTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: IAPLSTSLHQRQCHKCKSRNRIC*RSPLFC
Trigger: GCAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCT...GGATTTGCATTTGTGGCACTGTCTTTGATGCAGTGATGTACTTAATGGTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR CCA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTTTAGGAATTTCATTCTaGAGTCTTGCTCTAAGGTCA +
Preference number: 2 (lower is better)
Translates to: KDSATNANPIGEGSPETCLGISF*SLALRS
Trigger: TGACCTTAGAGCAAGACTCCAGAATGAAATTCCTAA...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR CCA 72 bp TCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTaGTGGCATTTTGCCCAGCACTCCACCAGCCGCTCC +
Preference number: 3 (lower is better)
Translates to: SIRSCRAMGDKA*WHFAQHSTSRS
Trigger: GGAGCGGCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 72 bp CTGGACACCTCGCTGAAGCTGCTACAGCCCGCCACCTaGGCATGCACTGCAAGGCCCTGCTCAAAGCTTCCT +
Preference number: 3 (lower is better)
Translates to: LDTSLKLLQPAT*ACTARPCSKLP
Trigger: AGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGCCCAGGTGGCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp TGCTGTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGGAGGCTGCTGTGACTaGGATCCCAGGGTCATTGGC +
Preference number: 3 (lower is better)
Translates to: CCGSPAPSRARRQSASPTGGCCD*DPRVIG
Trigger: GCCAATGACCCTGGGATCCAAGTCACAGCAGCCTCC...TGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
3UTR GCA 72 bp CTGGGCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTaGATCCACACATCGGGCAACCTCATGGAGCCCAGC +
Preference number: 3 (lower is better)
Translates to: LGMHCKALLKAS*IHTSGNLMEPS
Trigger: GCTGGGCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR GCA 72 bp GCTGAAGCTGCTACAGCCCGCCACCTGGGCATGCACTaGAAGGCCCTGCTCAAAGCTTCCTGCATCCACACA +
Preference number: 3 (lower is better)
Translates to: AEAATARHLGMH*KALLKASCIHT
Trigger: TGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGCCCAGGTGGCGGGCTGTAGCAGCTTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 72 bp CAGGGGAGGTATCAGTGGTGCTTGTGCCACTTGCTCTaGCACCTGCAGTGGTGGGAGAGGCTGGCCTTTGCT +
Preference number: 3 (lower is better)
Translates to: QGRYQWCLCHLL*HLQWWERLAFA
Trigger: AGCAAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATACCTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp CCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCGGGAGAGGCTGGCCTTaGCTGAAGGAAGAGGAGATC +
Preference number: 3 (lower is better)
Translates to: PSGPAEPWGTKPGGILPSGRGWP*LKEEEI
Trigger: GATCTCCTCTTCCTTCAGCAAAGGCCAGCCTCTCCC...GCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR TCA 72 bp TGCAGGCTGAGTTCTCCTGGAACTCCTGGGGGAGCATaGCTCACACTGGAGACAGGGGGCTGTGAGGGAAGA +
Preference number: 3 (lower is better)
Translates to: CRLSSPGTPGGA*LTLETGGCEGR
Trigger: TCTTCCCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTCCCCCAGGAGTTCCAGGAGAACTCAGCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR GCA 72 bp CAGACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTaGTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCT +
Preference number: 3 (lower is better)
Translates to: QTGSSVGEAPQS*SSRTDALGAAP
Trigger: AGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 72 bp CAGTGGTGCTTGTGCCACTTGCTCTGGCACCTGCAGTaGTGGGAGAGGCTGGCCTTTGCTGAAGGAAGAGGA +
Preference number: 3 (lower is better)
Translates to: QWCLCHLLWHLQ*WERLAFAEGRG
Trigger: TCCTCTTCCTTCAGCAAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAAGCACCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 72 bp CAGGCCTTACCCCAGGGCTCAAAGGCAAAGGCTGGATaGCCTGGGGCCCAGGTGCCCTGTAGTCACTTATAT +
Preference number: 3 (lower is better)
Translates to: QALPQGSKAKAG*PGAQVPCSHLY
Trigger: ATATAAGTGACTACAGGGCACCTGGGCCCCAGGCCATCCAGCCTTTGCCTTTGAGCCCTGGGGTAAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 72 bp TGGCAGGTGCTGAAGCTGCTGCAGGCTGAGTTCTCCTaGAACTCCTGGGGGAGCATGACTCACACTGGAGAC +
Preference number: 3 (lower is better)
Translates to: WQVLKLLQAEFS*NSWGSMTHTGD
Trigger: GTCTCCAGTGTGAGTCATGCTCCCCCAGGAGTTCCAGGAGAACTCAGCCTGCAGCAGCTTCAGCACCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482456.6
3UTR CCA 72 bp TCCACGGCCGGACCCAGTTCCCCAAGCAGGAGAGCCTaGCTTAGGAGTCCATCAATATCTGGCTGCAGAAGG +
Preference number: 3 (lower is better)
Translates to: STAGPSSPSRRA*LRSPSISGCRR
Trigger: CCTTCTGCAGCCAGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGCCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469546.6
3UTR-3UTR CAA 90 bp GCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCGCCTTGGAGATGGAGTaGGGACCTGGTGAGAAGGCT +
Preference number: 3 (lower is better)
Translates to: ACTARPCSKLPASTHRATALEME*GPGEKA
Trigger: AGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGC...GGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp AGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGCCCGCAGACAGGGAGCAGCGTaGGAGAAGCGCCTCAAAGCT +
Preference number: 3 (lower is better)
Translates to: SLQDRHEAGHLAEAATARRQGAA*EKRLKA
Trigger: AGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTCT...GCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp GAGGACAGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAAAGGACCCCCAACCCTaGAGGAGCAGCGCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: EDSLQDRHEAGHLAEAATKDPQP*RSSAGR
Trigger: TCTTCCAGCGCTGCTCCTCAAGGGTTGGGGGTCCTT...TGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCTGTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR CAA 90 bp CACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTGGAGTCAAGGGCAGAAGGACCCCCAACCCTaGAGGAGCAGCGCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: HRRNGLGLRLQHRWSQGQKDPQP*RSSAGR
Trigger: TCTTCCAGCGCTGCTCCTCAAGGGTTGGGGGTCCTT...CTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
3UTR GCA 72 bp GGTATCAGTGGTGCTTGTGCCACTTGCTCTGGCACCTaGAGTGGTGGGAGAGGCTGGCCTTTGCTGAAGGAA +
Preference number: 3 (lower is better)
Translates to: GISGACATCSGT*SGGRGWPLLKE
Trigger: TTCCTTCAGCAAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 72 bp ACGGGAAGTCGATCATCCTCTGAGCACAGCACTAACTaGGTGGCTATGTCAGGATGCCAGGCCAGGCCTGAG +
Preference number: 3 (lower is better)
Translates to: TGSRSSSEHSTN*VAMSGCQARPE
Trigger: CTCAGGCCTGGCCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
3UTR-3UTR CAA 90 bp TCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCAAGGCACTCAGCTGGTTaGGAGCCAAGCCTACAGCAT +
Preference number: 3 (lower is better)
Translates to: SPAPSRARRQSASPTAESRHSAG*EPSLQH
Trigger: ATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCT...TGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp GGTGAAAACCCTTGGCCTTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGAAGGTATCAGTGGTGCTaGTGCCACTTGCTCTGGCAC +
Preference number: 3 (lower is better)
Translates to: GENPWPWRWSWDLVRRLGRYQWC*CHLLWH
Trigger: GTGCCAGAGCAAGTGGCACAAGCACCACTGATACCT...TCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp CAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCTGTTGTCTGTCACTGTaGAGGTCATTTCCCTTGGGC +
Preference number: 3 (lower is better)
Translates to: QVLQSHGGQSLVAFCPALCCLSL*RSFPLG
Trigger: GCCCAAGGGAAATGACCTCAACAGTGACAGACAACA...GAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp TCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCTGTTGTCTGTCACTGTaGAGGTCATTTCCCTTGGGC +
Preference number: 3 (lower is better)
Translates to: SCRAMGDKAWWHFAQHSTCCLSL*RSFPLG
Trigger: GCCCAAGGGAAATGACCTCAACAGTGACAGACAACA...GGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp AGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGCCCGCAAGCAGAGGCTTCCTTaGTGGTGTGTTTGGAGGCCT +
Preference number: 3 (lower is better)
Translates to: SLQDRHEAGHLAEAATARKQRLP*WCVWRP
Trigger: AGGCCTCCAAACACACCACAAAGGAAGCCTCTGCTT...GCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp AGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGCCCGCGTAGCGCTCCTGTGTTaGCTTCAGCAGATCTGTACC +
Preference number: 3 (lower is better)
Translates to: SLQDRHEAGHLAEAATARVALLC*LQQICT
Trigger: GGTACAGATCTGCTGAAGCAAACACAGGAGCGCTAC...GCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp GGTGAAAACCCTTGGCCTTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGACAGAATGTGTTGGGCTaGCCGGTTCCAAGACAGTGC +
Preference number: 3 (lower is better)
Translates to: GENPWPWRWSWDLVRRLGQNVLG*PVPRQC
Trigger: GCACTGTCTTGGAACCGGCAAGCCCAACACATTCTG...TCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp CAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCACCTAGAAGACAGAATGTGTaGGGCTTGCCGGTTCCAAGA +
Preference number: 3 (lower is better)
Translates to: QPGSMTLTRSPCCGSPAPRRQNV*GLPVPR
Trigger: TCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCT...AGGTGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
3UTR TCA 72 bp GCACCCATCCCTCACGTCCATGAGTTGTTCAAAGGGTaGACAGCAGTCAGCTCTACCCCAGACCCTGGGCTA +
Preference number: 3 (lower is better)
Translates to: APIPHVHELFKG*TAVSSTPDPGL
Trigger: TAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR TCA 72 bp AAGGTGCCAAGGGCATCGCTGGTGATGACTGAGGGGTaGAAACCCTTGGCCTTGGAGATGGAGTTGGGACCT +
Preference number: 3 (lower is better)
Translates to: KVPRASLVMTEG*KPLALEMELGP
Trigger: AGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACCCCTCAGTCATCACCAGCGATGCCCTTGGCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR TCA 72 bp GGATGGGAAGGTGCCAAGGGCATCGCTGGTGATGACTaGGGGGTGAAAACCCTTGGCCTTGGAGATGGAGTT +
Preference number: 3 (lower is better)
Translates to: GWEGAKGIAGDD*GVKTLGLGDGV
Trigger: AACTCCATCTCCAAGGCCAAGGGTTTTCACCCCTCAGTCATCACCAGCGATGCCCTTGGCACCTTCCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR TCA 72 bp GAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTaGTGTCCTCTGGAGGCTGTGACTTGGATCCCAGGG +
Preference number: 3 (lower is better)
Translates to: ECVGLAGSKTVP*CPLEAVTWIPG
Trigger: CCCTGGGATCCAAGTCACAGCCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482456.6
3UTR TCA 72 bp TTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTaGATCACGGGAAGTCGATCATCCTCTGAGCACAGC +
Preference number: 3 (lower is better)
Translates to: FKGEEAKRKSHS*ITGSRSSSEHS
Trigger: GCTGTGCTCAGAGGATGATCGACTTCCCGTGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
3UTR CCA 72 bp TCCACGGCCGGACCCAGTTCCCCAAGCAGGAGAGCCTaGCTTAGGAGTCCATCAATATCTTTTGTGATGGGG +
Preference number: 3 (lower is better)
Translates to: STAGPSSPSRRA*LRSPSISFVMG
Trigger: CCCCATCACAAAAGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGCCGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR CCA 72 bp TCCTGTGTTTGCTTCAGCAGATCTGTACCCCCAGCCTaGGCCAGGATAATGGCATCAGCAAAGCGCTCCTCC +
Preference number: 3 (lower is better)
Translates to: SCVCFSRSVPPA*ARIMASAKRSS
Trigger: GGAGGAGCGCTTTGCTGATGCCATTATCCTGGCCCAGGCTGGGGGTACAGATCTGCTGAAGCAAACACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAAGGCACTCAGCTGGTTaGGAGCCAAGCCTACAGCAT +
Preference number: 3 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPRHSAG*EPSLQH
Trigger: ATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCT...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp AGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAAAGCAGAGGCTTCCTTaGTGGTGTGTTTGGAGGCCT +
Preference number: 3 (lower is better)
Translates to: RLVPCCPPVPCEFPACHRKQRLP*WCVWRP
Trigger: AGGCCTCCAAACACACCACAAAGGAAGCCTCTGCTT...TCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATAAATGTCTCTGGCAGCTaGTTCCTCTGGAGGTTTCCC +
Preference number: 3 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDINVSGS*FLWRFP
Trigger: GGGAAACCTCCAGAGGAACAAGCTGCCAGAGACATT...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAAGAAGACAGAATGTGTaGGGCTTGCCGGTTCCAAGA +
Preference number: 3 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPRRQNV*GLPVPR
Trigger: TCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCT...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp TTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGAAACTGATCCAGCCGTaGAAGGAGGCAGCAGAGAAC +
Preference number: 3 (lower is better)
Translates to: FPWAEDSHLAPRHSSTMWKLIQP*KEAAEN
Trigger: GTTCTCTGCTGCCTCCTTCAACGGCTGGATCAGTTT...CCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGGAGGCTGCTGTGACTaGGATCCCAGGGTCATTGGC +
Preference number: 3 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKGGCCD*DPRVIG
Trigger: GCCAATGACCCTGGGATCCAAGTCACAGCAGCCTCC...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR TCA 72 bp AGGCCTGGCTGCAGAAGGCCTGTTGTCTGTCACTGTTaGGGTCATTTCCCTTGGGCTGAGGACTCTCACCTA +
Preference number: 3 (lower is better)
Translates to: RPGCRRPVVCHC*GHFPWAEDSHL
Trigger: TAGGTGAGAGTCCTCAGCCCAAGGGAAATGACCTCAACAGTGACAGACAACAGGCCTTCTGCAGCCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR GCA 72 bp ACACATAACAGAGTCTGGCTTCGGAGGTTAGTGCCCTaGTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGT +
Preference number: 3 (lower is better)
Translates to: THNRVWLRRLVP*CPPVPCEFPAC
Trigger: ACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGACTCTGTTATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR GCA 72 bp GGTCCCGAGGGCACCACTGCACATCAAAGCACCAGCTaGTCTGTGTTGGTAGCTTATATACCACCTCACTGC +
Preference number: 3 (lower is better)
Translates to: GPEGTTAHQSTS*SVLVAYIPPHC
Trigger: GCAGTGAGGTGGTATATAAGCTACCAACACAGAGCAGCTGGTGCTTTGATGTGCAGTGGTGCCCTCGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR CCA 72 bp AGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTaGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCC +
Preference number: 3 (lower is better)
Translates to: RRNGLGLRLQHR*SQGQFPIGCGS
Trigger: GGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CAA 90 bp CAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGAGGAGGCACTCAGCTGGTTaGGAGCCAAGCCTACAGCAT +
Preference number: 3 (lower is better)
Translates to: QMQIQSEKVALRHVVAARRHSAG*EPSLQH
Trigger: ATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCT...CCTCGCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR CAA 90 bp AGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGACCAAAGTTTCCTCTCTaGGTTCTGCTCAGCACCCAT +
Preference number: 3 (lower is better)
Translates to: RLVPCCPPVPCEFPACHRPKFPL*VLLSTH
Trigger: ATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGG...TCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp AGTGGCCTCCTAGCAAGAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGAAATGTCTCTGGCAGCTaGTTCCTCTGGAGGTTTCCC +
Preference number: 3 (lower is better)
Translates to: SGLLAREAAWFRPAAYERNVSGS*FLWRFP
Trigger: GGGAAACCTCCAGAGGAACAAGCTGCCAGAGACATT...TCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGCTAGGAGGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGAGACAGGGAGCAGCGTaGGAGAAGCGCCTCAAAGCT +
Preference number: 3 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRRQGAA*EKRLKA
Trigger: AGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTCT...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp AGCAGAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCTCTGGAGGCTGTGACTaGGATCCCAGGGTCATTGGC +
Preference number: 3 (lower is better)
Translates to: SRRQNVLGLPVPRQCLDVSGGCD*DPRVIG
Trigger: GCCAATGACCCTGGGATCCAAGTCACAGCCTCCAGA...GACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482456.6
3UTR TCA 72 bp GCTGATCGCATCAGGAATTCAGATTCTGTGGTGACTTaGCTGATGAAGACTAGGCGGGGGCAAGGCTGTGGC +
Preference number: 3 (lower is better)
Translates to: ADRIRNSDSVVT*LMKTRRGQGCG
Trigger: GCCACAGCCTTGCCCCCGCCTAGTCTTCATCAGTCAAGTCACCACAGAATCTGAATTCCTGATGCGATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAAAGAAACAGAATCTGTaGCAGAAGTCCCCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPKKQNL*QKSPLL
Trigger: CAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCTT...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp AGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGTTCCAAGACAGTGCCTaGATGTCCTCTGGAGGCTGT +
Preference number: 3 (lower is better)
Translates to: SRSSSEHSTNWVAMSGCQFQDSA*MSSGGC
Trigger: ACAGCCTCCAGAGGACATCAAGGCACTGTCTTGGAA...CTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482456.6
3UTR-3UTR CAA 90 bp ATCACGGGAAGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCACAGAATGTGTTGGGCTaGCCGGTTCCAAGACAGTGC +
Preference number: 3 (lower is better)
Translates to: ITGSRSSSEHSTNWVAMSQNVLG*PVPRQC
Trigger: GCACTGTCTTGGAACCGGCAAGCCCAACACATTCTG...TGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTCCCGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
3UTR TCA 72 bp CTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATaGGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTAC +
Preference number: 3 (lower is better)
Translates to: LLVLLSTHPSRP*VVQRVNSSQLY
Trigger: GTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR TCA 72 bp TGTTGTCTGTCACTGTTGAGGTCATTTCCCTTGGGCTaGGGACTCTCACCTAGCCCCACGTCACTCTTCAAC +
Preference number: 3 (lower is better)
Translates to: CCLSLLRSFPLG*GLSPSPTSLFN
Trigger: GTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAAATGACCTCAACAGTGACAGACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR GCA 72 bp CTTGCACCTGAGCTGTCTCTGGCGGGCTTCAGGAACTaGCACAGCATCTTTTCACTTTGCAGTAAAGCTTGC +
Preference number: 3 (lower is better)
Translates to: LAPELSLAGFRN*HSIFSLCSKAC
Trigger: GCAAGCTTTACTGCAAAGTGAAAAGATGCTGTGGCAGTTCCTGAAGCCCGCCAGAGACAGCTCAGGTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
3UTR CCA 72 bp CAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTaGGCTACAGAGAAATACGGACCTGGAAATACCAAG +
Preference number: 3 (lower is better)
Translates to: QRVNSSQLYPRP*ATEKYGPGNTK
Trigger: CTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 72 bp CACATTGTGGCAGAAACTAACATCCTTTCAGGAAGATaGGCACTAGGGCAAAGGTGCAGCCCTCCCAAACCC +
Preference number: 3 (lower is better)
Translates to: HIVAETNILSGR*ALGQRCSPPKP
Trigger: GGGTTTGGGAGGGCTGCACCTTTGCCCTAGTGCCCATCTTCCTGAAAGGATGTTAGTTTCTGCCACAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CAA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGAGGCACTCAGCTGGTTaGGAGCCAAGCCTACAGCAT +
Preference number: 3 (lower is better)
Translates to: LGYREIRTWKYQVRGREKRHSAG*EPSLQH
Trigger: ATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCT...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp CTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGTAGCGCTCCTGTGTTaGCTTCAGCAGATCTGTACC +
Preference number: 3 (lower is better)
Translates to: LVWSQAYSITYLAARKRVVALLC*LQQICT
Trigger: GGTACAGATCTGCTGAAGCAAACACAGGAGCGCTAC...GACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp CACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTGGAGTCAAGGGCAGACCAGCTGCTCTGTGTaGGTAGCTTATATACCACCT +
Preference number: 3 (lower is better)
Translates to: HRRNGLGLRLQHRWSQGQTSCSV*VAYIPP
Trigger: AGGTGGTATATAAGCTACCAACACAGAGCAGCTGGT...CTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR-3UTR CAA 90 bp ACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTAAGGAAGAGGAGATCTaGTCAGCCTGTCTCATATGC +
Preference number: 3 (lower is better)
Translates to: TGSSVGEAPQSCSSRTDAKEEEI*SACLIC
Trigger: GCATATGAGACAGGCTGACAAGATCTCCTCTTCCTT...AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482456.6
3UTR-3UTR CAA 90 bp GTTCCGGCACAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCAAGAAACAGAATCTGTaGCAGAAGTCCCCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: VPAQDLAVLSTSEQQLSIKKQNL*QKSPLL
Trigger: CAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCTT...GATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp GAGCATGACTCACACTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTAAGAAACAGAATCTGTaGCAGAAGTCCCCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: EHDSHWRQGAVREESLVAKKQNL*QKSPLL
Trigger: CAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCTT...AGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGAGAAGACAGAATGTGTaGGGCTTGCCGGTTCCAAGA +
Preference number: 3 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRRRQNV*GLPVPR
Trigger: TCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCT...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGCAAGCCCTTCAAACCTaGTCAGCCTGTCTCATATGC +
Preference number: 3 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRQALQT*SACLIC
Trigger: GCATATGAGACAGGCTGACAAGGTTTGAAGGGCTTG...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR-3UTR CAA 90 bp CTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGACTTCAGATCTCTCACTaGCTCATTTCCTTTGATAGG +
Preference number: 3 (lower is better)
Translates to: LQGPAQSFLHPHIGQPHGLQISH*LISFDR
Trigger: CCTATCAAAGGAAATGAGCAAGTGAGAGATCTGAAG...TCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR TCA 72 bp GACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATaGTGTCTCTTTAGAGTGGAGGGTAGCTCCCACAAC +
Preference number: 3 (lower is better)
Translates to: DLVRRLGSQSVR*CLFRVEGSSHN
Trigger: GTTGTGGGAGCTACCCTCCACTCTAAAGAGACATCATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR TCA 72 bp ATATCTGGCTGCAGAAGGCCTGTTGTCTGTCACTGTTaGGGTCATTTCCCTTGGGCTGAGGACTCTCACCTA +
Preference number: 3 (lower is better)
Translates to: ISGCRRPVVCHC*GHFPWAEDSHL
Trigger: TAGGTGAGAGTCCTCAGCCCAAGGGAAATGACCTCAACAGTGACAGACAACAGGCCTTCTGCAGCCAGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469546.6
3UTR GCA 72 bp TTCCCAGCATGTCACAGAGCTCGGGAAATTTCTCTGTaGCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTC +
Preference number: 3 (lower is better)
Translates to: FPACHRAREISL*LSMSVAKPVPL
Trigger: GAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATTTCCCGAGCTCTGTGACATGCTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR GCA 72 bp TACCAAGCCCTTCAAACCTTGTCAGCCTGTCTCATATaGTGGACTTCCCAGCTCCTACCCATCACAGAGTAC +
Preference number: 3 (lower is better)
Translates to: YQALQTLSACLI*WTSQLLPITEY
Trigger: GTACTCTGTGATGGGTAGGAGCTGGGAAGTCCAGCATATGAGACAGGCTGACAAGGTTTGAAGGGCTTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
3UTR CCA 72 bp ATGTATAGTCTCATCTCCTTGCACCTGAGCTGTCTCTaGCGGGCTTCAGGAACTGCCACAGCATCTTTTCAC +
Preference number: 3 (lower is better)
Translates to: MYSLISLHLSCL*RASGTATASFH
Trigger: GTGAAAAGATGCTGTGGCAGTTCCTGAAGCCCGCCAGAGACAGCTCAGGTGCAAGGAGATGAGACTATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAAAGGCACTCAGCTGGTTaGGAGCCAAGCCTACAGCAT +
Preference number: 3 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKRHSAG*EPSLQH
Trigger: ATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCT...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAAATGAGGACCCCGCAGTaGCTCCAAGCTCCTGTTAAG +
Preference number: 3 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKMRTPQ*LQAPVK
Trigger: CTTAACAGGAGCTTGGAGCAACTGCGGGGTCCTCAT...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTATGAGGACCCCGCAGTaGCTCCAAGCTCCTGTTAAG +
Preference number: 3 (lower is better)
Translates to: ILPQVLTECSIRESEELIMRTPQ*LQAPVK
Trigger: CTTAACAGGAGCTTGGAGCAACTGCGGGGTCCTCAT...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGTTGTCTTTAAGTCAGTaGCAGACAGGGAGCAGCGTT +
Preference number: 3 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRLSLSQ*QTGSSV
Trigger: AACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAA...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR TCA 72 bp AGTCATGTTCTGAGGGACCAGCTCATCAAAGAAGGCTaGGGAAGCAGAGGCTTCCTTTGTGGTGTGTTTGGA +
Preference number: 3 (lower is better)
Translates to: SHVLRDQLIKEG*GSRGFLCGVFG
Trigger: TCCAAACACACCACAAAGGAAGCCTCTGCTTCCTCAGCCTTCTTTGATGAGCTGGTCCCTCAGAACATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
3UTR GCA 72 bp GAGTGTAGTATTAGGGAGAGTGAAGAACTGATTCTATaGCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGA +
Preference number: 3 (lower is better)
Translates to: ECSIRESEELIL*PASRPESVLDR
Trigger: TCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAATCAGTTCTTCACTCTCCCTAATACTACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR GCA 72 bp GATGATAGGTTCATTCTTCCTGAGATCCCACACAACTaGCTTGCCACTGGGGTGAGCAGAAGACAGAATGTG +
Preference number: 3 (lower is better)
Translates to: DDRFILPEIPHN*LATGVSRRQNV
Trigger: CACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGGGATCTCAGGAAGAATGAACCTATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
3UTR-3UTR CAA 90 bp CTAAGGTCACCTTCAGGAACTGCCACAGCATCTTTTCACTTTGCAGTAAAGCTTAGGTATCAGTGGTGCTaGTGCCACTTGCTCTGGCAC +
Preference number: 3 (lower is better)
Translates to: LRSPSGTATASFHFAVKLRYQWC*CHLLWH
Trigger: GTGCCAGAGCAAGTGGCACAAGCACCACTGATACCT...AAGCTTTACTGCAAAGTGAAAAGATGCTGTGGCAGTTCCTGAAGGTGACCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469546.6
3UTR-3UTR CAA 90 bp GAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTAACCAGCTGCTCTGTGTaGGTAGCTTATATACCACCT +
Preference number: 3 (lower is better)
Translates to: EYVSSKASASLQFFRLQVTSCSV*VAYIPP
Trigger: AGGTGGTATATAAGCTACCAACACAGAGCAGCTGGT...TACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR TCA 72 bp TCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTaGTTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCT +
Preference number: 3 (lower is better)
Translates to: SLQSVVLGRVKN*FYALPPGLRVS
Trigger: AGACACTCTCAGGCCTGGAGGCAGGGCATAGAATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 72 bp GGTAGCGAGGGTGGGACTCCCATGCAAGTAGGCTCTTaGAAAGACTACTACATTCAAAGTCTACAATGGAGT +
Preference number: 3 (lower is better)
Translates to: GSEGGTPMQVGS*KDYYIQSLQWS
Trigger: ACTCCATTGTAGACTTTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCATGGGAGTCCCACCCTCGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CAA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGAAGAAACAGAATCTGTaGCAGAAGTCCCCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: LGYREIRTWKYQVRGREKKKQNL*QKSPLL
Trigger: CAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCTT...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR-3UTR CAA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTGTCTTTAAGTCAGTaGCAGACAGGGAGCAGCGTT +
Preference number: 3 (lower is better)
Translates to: AALEENHSLIWLQFQNWALSLSQ*QTGSSV
Trigger: AACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAA...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR-3UTR CAA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAAAGAAACAGAATCTGTaGCAGAAGTCCCCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPKKQNL*QKSPLL
Trigger: CAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCTT...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
3UTR-3UTR CAA 90 bp AATTTCATTCTGGAGTCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCAAACTGATCCAGCCGTaGAAGGAGGCAGCAGAGAAC +
Preference number: 3 (lower is better)
Translates to: NFILESCSKVTCLMYSLIKLIQP*KEAAEN
Trigger: GTTCTCTGCTGCCTCCTTCAACGGCTGGATCAGTTT...GATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR TCA 72 bp ACTCCATTTTGGGAGGAATCCTTGAGACACCCAATTTaGCCTAGAAAGGTCAGACTCCCATATTCCAGGGGA +
Preference number: 3 (lower is better)
Translates to: TPFWEESLRHPI*PRKVRLPYSRG
Trigger: TCCCCTGGAATATGGGAGTCTGACCTTTCTAGGTCAAATTGGGTGTCTCAAGGATTCCTCCCAAAATGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR GCA 72 bp AGGCTACAGGTACACACCACATCCTTCCAATTCTTTTaGACAACACAGGCTAGAAGCGAGGAGATTTTGGTT +
Preference number: 3 (lower is better)
Translates to: RLQVHTTSFQFF*TTQARSEEILV
Trigger: AACCAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATGTGGTGTGTACCTGTAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CCA 72 bp GGCTCTTGGAAAGACTACTACATTCAAAGTCTACAATaGAGTGTGGCACAAAATGGATCTATAGAAGAGAGA +
Preference number: 3 (lower is better)
Translates to: GSWKDYYIQSLQ*SVAQNGSIEER
Trigger: TCTCTCTTCTATAGATCCATTTTGTGCCACACTCCATTGTAGACTTTGAATGTAGTAGTCTTTCCAAGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR CCA 72 bp CTACATTCAAAGTCTACAATGGAGTGTGGCACAAAATaGATCTATAGAAGAGAGAAAGATAAGAGTCATACT +
Preference number: 3 (lower is better)
Translates to: LHSKSTMECGTK*IYRREKDKSHT
Trigger: AGTATGACTCTTATCTTTCTCTCTTCTATAGATCCATTTTGTGCCACACTCCATTGTAGACTTTGAATGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp CAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCACCTCCTGGGCTCACCCCATaGGGACCCCGCAGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: QPGSMTLTRSPCCGSPAPPGLTP*GPRSCS
Trigger: GGAGCAACTGCGGGGTCCTCATGGGGTGAGCCCAGG...AGGTGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCACCGGAGCCGCTCCTCTaGCAGGGCTCTCGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: AGTQLVWSQAYSITYLAAPEPLL*QGSRAE
Trigger: CTCCGCGCGAGAGCCCTGCCAGAGGAGCGGCTCCGG...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR CCA 90 bp TCCACGGCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAAAGGCAAAGGCTGGATaGCCTGGGGCCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: STAGPSSPSRRAWLRSPSKAKAG*PGAQVP
Trigger: GGGCACCTGGGCCCCAGGCCATCCAGCCTTTGCCTT...TGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGCCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCGGGTGTGGGAGACCATaGGGCCGGGACCTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: QVLQSHGGQSLVAFCPALGCGRP*GRDLVV
Trigger: GACCACTAGGTCCCGGCCGCATGGTCTCCCACACCC...GAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR CCA 90 bp CCACACAACTGCCTTGCCACTGGGGTGAGCAGAAGACAGAATGTGTTGGGCTTGCCGGAGCCGCTCCTCTaGCAGGGCTCTCGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: PHNCLATGVSRRQNVLGLPEPLL*QGSRAE
Trigger: CTCCGCGCGAGAGCCCTGCCAGAGGAGCGGCTCCGG...CAAGCCCAACACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
CDS-3UTR GCA 90 bp TGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTGGAGGCTGCTGTGACGCCCTCAGCCCACTGTaGGGAAGACCCCGGACAAGG +
Preference number: 4 (lower is better)
Translates to: WACRFQDSALMSSGGCCDALSPL*GRPRTR
Trigger: CCTTGTCCGGGGTCTTCCGCACAGTGGGCTGAGGGC...GTCACAGCAGCCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
CDS-3UTR GCA 90 bp TCCACGGCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAAGCCTGGTGGCATTTTaGCCAGCACTCCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: STAGPSSPSRRAWLRSPSSLVAF*PALHQP
Trigger: CGGCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCT...TGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAAGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCCCGGAGCCGCTCCTCTaGCAGGGCTCTCGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: EVDHPLSTALTGWLCQDAPEPLL*QGSRAE
Trigger: CTCCGCGCGAGAGCCCTGCCAGAGGAGCGGCTCCGG...GGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
CDS-3UTR CCA 90 bp TCCACGGCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCACTCTGGCACCTGCAGTaGTGGGAGAGGCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: STAGPSSPSRRAWLRSPSLWHLQ*WERLAF
Trigger: AAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAG...TGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGCCTACAGCCCGCCACCTaGGCATGCACTGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ARPCSKLPASTHRATSWSLQPAT*ACTARP
Trigger: GGGCCTTGCAGTGCATGCCCAGGTGGCGGGCTGTAG...GCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TGCTGTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAATGCCAGGCCAGGCCTaGGCAGTGCATCCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CCGSPAPSRARRQSASPTMPGQA*AVHPVA
Trigger: AGCAACAGGATGCACTGCTCAGGCCTGGCCTGGCAT...TGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR TCA 90 bp TCCACGGCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAGCTGAAGCTGCAGGCTaGGTTCTCCTGGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: STAGPSSPSRRAWLRSPSAEAAG*VLLELL
Trigger: CAGGAGTTCCAGGAGAACTCAGCCTGCAGCTTCAGC...TGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGCCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp CCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCCTGCTCTTCAAGGACTaGTGCTCTGGGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSGPAEPWGTKPGGILPSLLFKD*CSGGSS
Trigger: GGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAG...GCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAGCAGCCCAGCCACGACATaGGGTGAGAGTGTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: CRAMGDKAWWHFAQHSTSSPATT*GESVPS
Trigger: TGAGGGGACACTCTCACCTCATGTCGTGGCTGGGCT...GCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAAGCTGGACACCTCGCTaGAGCTGCTACAGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPSWTPR*SCYSPP
Trigger: TGGCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCT...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGCAGCTGGACACCTCGCTaGAGCTGCTACAGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: ARPCSKLPASTHRATSWSSWTPR*SCYSPP
Trigger: TGGCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCT...GCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAGCCCCTGCCTCCAGGCCTaGGAGTGTCTTGGACAGATC +
Preference number: 4 (lower is better)
Translates to: CRAMGDKAWWHFAQHSTSPCLQA*ECLGQI
Trigger: GATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGG...GCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCACCCTGCCTCCAGGCCTaGGAGTGTCTTGGACAGATC +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPPCLQA*ECLGQI
Trigger: GATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGG...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCCACGGCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAGAGATCCCACACAACTaGCTTGCCACTGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: STAGPSSPSRRAWLRSPSEIPHN*LATGVS
Trigger: GCTCACCCCAGTGGCAAGGCAGTTGTGTGGGATCTC...TGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGCCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAAGCCTGGTGGCATTTTaGCCAGCACTCCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPSLVAF*PALHQP
Trigger: CGGCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCT...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGGGCAGAAAACTGACATaGCCCTCAGCCCACTGTGCG +
Preference number: 4 (lower is better)
Translates to: VALQHLQGRGGKAQVPQLGRKLT*PSAHCA
Trigger: CGCACAGTGGGCTGAGGGCCATGTCAGTTTTCTGCC...CAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
CDS-3UTR CCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGAAGGCAAAGGCTGGATaGCCTGGGGCCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: CKALLKASCIHTSGNLMEKAKAG*PGAQVP
Trigger: GGGCACCTGGGCCCCAGGCCATCCAGCCTTTGCCTT...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGAAGGCAAAGGCTGGATaGCCTGGGGCCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWKAKAG*PGAQVP
Trigger: GGGCACCTGGGCCCCAGGCCATCCAGCCTTTGCCTT...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGGAGGGGCTGGGGTGTaGGAGACCATGCGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: ATNANPIGEGSPETCGGCGGAGV*ETMRPG
Trigger: TCCCGGCCGCATGGTCTCCCACACCCCAGCCCCTCC...GCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR TCA 90 bp TGCCTTGCCACTGGGGTGAGCAGAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGAATCGCTGGCCCCTaGAGCCAGGAGGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: CLATGVSRRQNVLGLPVPRIAGP*SQEVAL
Trigger: CAGGGCAACCTCCTGGCTTCAGGGGCCAGCGATTCT...TGGAACCGGCAAGCCCAACACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR TCA 90 bp AGGCTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGGCAGCAGAGAACACTaGAGGGTCCCGAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: RLQHRWSQGQFPIGCGSPGSREH*RVPRAP
Trigger: TGGTGCCCTCGGGACCCTTCAGTGTTCTCTGCTGCC...AGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp TCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCAGGCAGCAGAGAACACTaGAGGGTCCCGAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: SPAPSRARRQSASPTAESGSREH*RVPRAP
Trigger: TGGTGCCCTCGGGACCCTTCAGTGTTCTCTGCTGCC...TGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCATCATTTCCCTTGGGCTaGGGACTCTCACCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPSFPLG*GLSPSP
Trigger: GGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAAATGA...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAACCTGGGCTCACCCCATaGGGACCCCGCAGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CSKGEQQSALPQTLGYREPGLTP*GPRSCS
Trigger: GGAGCAACTGCGGGGTCCTCATGGGGTGAGCCCAGG...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TGTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGGAGTTGGGACCTGGTaGGAAGGCTGGGATCCCAAT +
Preference number: 4 (lower is better)
Translates to: CGSPAPSRARRQSASPTAGVGTW*EGWDPN
Trigger: ATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCC...AGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGCCCGCAGCCCAGCCACGACATaGGGTGAGAGTGTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: SLQDRHEAGHLAEAATARSPATT*GESVPS
Trigger: TGAGGGGACACTCTCACCTCATGTCGTGGCTGGGCT...GCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGTCCAAGACAGTGCCTTaGTGTCCTCTGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VALQHLQGRGGKAQVPQLSKTVP*CPLEAV
Trigger: CACAGCCTCCAGAGGACATCAAGGCACTGTCTTGGA...CAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482456.6
CDS-3UTR GCA 90 bp TCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCCCCACACAACTGCCTTaGCACTGGGGTGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SCRAMGDKAWWHFAQHSTPTQLP*HWGEQK
Trigger: CTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGGG...GGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGCAGCCTGGTGGCATTTTaGCCAGCACTCCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: ARPCSKLPASTHRATSWSSLVAF*PALHQP
Trigger: CGGCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCT...GCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGGCACTAGGGCAAAGGTaGAGCCCTCCCAAACCCCGG +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWALGQR*SPPKPR
Trigger: CCGGGGTTTGGGAGGGCTGCACCTTTGCCCTAGTGC...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp GTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAAGATCCCCCTGCTGTaGCTCTCCAGCACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VALQHLQGRGGKAQVPQLKIPLL*LSSTFK
Trigger: CTTGAAGGTGCTGGAGAGCCACAGCAGGGGGATCTT...CAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp GCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCCTCTGGCACCTGCAGTaGTGGGAGAGGCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: ACTARPCSKLPASTHRATLWHLQ*WERLAF
Trigger: AAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAG...GGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCTTGTGCCACTTGCTCTaGCACCTGCAGTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QVLQSHGGQSLVAFCPALLCHLL*HLQWWE
Trigger: CTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAA...GAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGCAGAGGCTTCCTTTGTaGTGTGTTTGGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VALQHLQGRGGKAQVPQLQRLPL*CVWRPG
Trigger: GCCAGGCCTCCAAACACACCACAAAGGAAGCCTCTG...CAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAGCGGGGACAAAGCCTGGTaGCATTTTGCCCAGCACTCC +
Preference number: 4 (lower is better)
Translates to: CRAMGDKAWWHFAQHSTSGDKAW*HFAQHS
Trigger: GGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCC...GCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp ACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTGGTTGTGGCAGGGCCTaGGCTCACCCCATGAGGACC +
Preference number: 4 (lower is better)
Translates to: TGSSVGEAPQSCSSRTDAGCGRA*AHPMRT
Trigger: GGTCCTCATGGGGTGAGCCCAGGCCCTGCCACAACC...AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGAGCATGACTCACACTaGAGACAGGGGGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPEHDSH*RQGAVR
Trigger: CCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGCTACAGCCCGCCACCTaGGCATGCACTGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: VDHPLSTALTGWLCQDARLQPAT*ACTARP
Trigger: GGGCCTTGCAGTGCATGCCCAGGTGGCGGGCTGTAG...CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTTCAAGTCGAGGGCTCTaGCAGCCCCCGTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPASSRGL*QPPCAS
Trigger: AGAAGCACACGGGGGCTGTCAGAGCCCTCGACTTGA...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR TCA 90 bp TTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGTCAAGTCGAGGGCTCTaGCAGCCCCCGTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FPWAEDSHLAPRHSSTMWSSRGL*QPPCAS
Trigger: AGAAGCACACGGGGGCTGTCAGAGCCCTCGACTTGA...CCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000469546.6
CDS-3UTR TCA 90 bp GAGGACAGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAAGAATCGCTGGCCCCTaGAGCCAGGAGGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: EDSLQDRHEAGHLAEAATRIAGP*SQEVAL
Trigger: CAGGGCAACCTCCTGGCTTCAGGGGCCAGCGATTCT...TGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCTGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGAAGAATCGCTGGCCCCTaGAGCCAGGAGGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RVNSSQLYPRPWATEKYGRIAGP*SQEVAL
Trigger: CAGGGCAACCTCCTGGCTTCAGGGGCCAGCGATTCT...TCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAATGCCAGGCCAGGCCTaGGCAGTGCATCCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LQGPAQSFLHPHIGQPHGMPGQA*AVHPVA
Trigger: AGCAACAGGATGCACTGCTCAGGCCTGGCCTGGCAT...TCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCACCTCGCAAGTCCCACAGCTaGATCACGGGAAGTCGATCA +
Preference number: 4 (lower is better)
Translates to: QPGSMTLTRSPCCGSPAPRKSHS*ITGSRS
Trigger: TGATCGACTTCCCGTGATTCAGCTGTGGGACTTGCG...AGGTGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR TCA 90 bp CACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTGGAGTCAAGGGCAGGGCAGCAGAGAACACTaGAGGGTCCCGAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: HRRNGLGLRLQHRWSQGQGSREH*RVPRAP
Trigger: TGGTGCCCTCGGGACCCTTCAGTGTTCTCTGCTGCC...CTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp GAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGCCACCTTCTTCTGGCAGCAGAGAACACTaGAGGGTCCCGAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: EDSHLAPRHSSTMWPPSSGSREH*RVPRAP
Trigger: TGGTGCCCTCGGGACCCTTCAGTGTTCTCTGCTGCC...AGAAGAAGGTGGCCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp ATCCCTGGGGGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGCCTGGGCTCACCCCATaGGGACCCCGCAGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: IPGGEDILPQVLTECSIRPGLTP*GPRSCS
Trigger: GGAGCAACTGCGGGGTCCTCATGGGGTGAGCCCAGG...CCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCCCAGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGCCCGCGGAGTTGGGACCTGGTaGGAAGGCTGGGATCCCAAT +
Preference number: 4 (lower is better)
Translates to: SLQDRHEAGHLAEAATARGVGTW*EGWDPN
Trigger: ATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCC...GCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAGCATCGCTGGTGATGACTaGGGGGTGAAAACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: CRAMGDKAWWHFAQHSTSIAGDD*GVKTLG
Trigger: GCCAAGGGTTTTCACCCCTCAGTCATCACCAGCGAT...GCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGGCTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTCTGCTCTTCAAGGACTaGTGCTCTGGGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RLQHRWSQGQFPIGCGSPLLFKD*CSGGSS
Trigger: GGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAG...AGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATACTGCTCTTCAAGGACTaGTGCTCTGGGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDILLFKD*CSGGSS
Trigger: GGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAG...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAATATCTAGCCCAGCCACGACATaGGGTGAGAGTGTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: AGPSSPSRRAWLRSPSISSPATT*GESVPS
Trigger: TGAGGGGACACTCTCACCTCATGTCGTGGCTGGGCT...AGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGCCCTGCCTCCAGGCCTaGGAGTGTCTTGGACAGATC +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWPCLQA*ECLGQI
Trigger: GATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGG...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAGCTTTCCAGAAGCCCACTaGCAAAGCTCCCCCAGACCA +
Preference number: 4 (lower is better)
Translates to: CRAMGDKAWWHFAQHSTSFPEAH*QSSPRP
Trigger: TGGTCTGGGGGAGCTTTGGCAGTGGGCTTCTGGAAA...GCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000469546.6
CDS-3UTR GCA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCACCCACACAACTGCCTTaGCACTGGGGTGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPPTQLP*HWGEQK
Trigger: CTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGGG...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TTCCTGCATCCACACATCGGGCAACCTCATGGAGCCCAGCCACGACATGAGGTGTCCCGAGGGCACCACTaGACATCAAAGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: FLHPHIGQPHGAQPRHEVSRGHH*TSKHQL
Trigger: CAGCTGGTGCTTTGATGTGCAGTGGTGCCCTCGGGA...CACCTCATGTCGTGGCTGGGCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGGTGCTTGTGCCACTTaGTCTGGCACCTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPGACAT*SGTCSG
Trigger: ACCACTGCAGGTGCCAGAGCAAGTGGCACAAGCACC...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGTATCAGTGGTGCTTGTaGCACTTGCTCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: VALQHLQGRGGKAQVPQLYQWCL*HLLWHL
Trigger: CAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATA...CAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCGGGAGGTATCAGTGGTaGTTGTGCCACTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SCRAMGDKAWWHFAQHSTGRYQW*LCHLLW
Trigger: CCAGAGCAAGTGGCACAAGCACCACTGATACCTCCC...GGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTTGCCCTCCTGTTCCATaGGAGTTCCCAGCATGTCAC +
Preference number: 4 (lower is better)
Translates to: CGSPAPSRARRQSASPTACPPVP*EFPACH
Trigger: GTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA...AGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTGGAGGCTGTGACCGGAGGTTAGTGCCCTaGTGCCCTCCTGTTCCATGC +
Preference number: 4 (lower is better)
Translates to: CWACRFQDSALMSSGGCDRRLVP*CPPVPC
Trigger: GCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCG...GTCACAGCCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482456.6
CDS-3UTR GCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCATCATGGTCTATCCTGTaGGGAAGACCCCGGACAAGG +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPSWSIL*GRPRTR
Trigger: CCTTGTCCGGGGTCTTCCGCACAGGATAGACCATGA...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462434.5
CDS-3UTR CCA 90 bp ACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTGCTGGGCTCCATGCCTaGACAGCTGGCCGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: TGSSVGEAPQSCSSRTDAAGLHA*TAGRSS
Trigger: ACTTGAGCGGCCAGCTGTCCAGGCATGGAGCCCAGC...AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGGCTGGGCTCCATGCCTaGACAGCTGGCCGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: VDHPLSTALTGWLCQDARAGLHA*TAGRSS
Trigger: ACTTGAGCGGCCAGCTGTCCAGGCATGGAGCCCAGC...CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGCCAGGAGGTTGCCCTaGAAAGGATTCAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPARRLP*KGFKSR
Trigger: CCTCGACTTGAATCCTTTCCAGGGCAACCTCCTGGC...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CCA 90 bp CCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCAAGATCCCCCTGCTGTaGCTCTCCAGCACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PSGPAEPWGTKPGGILPSKIPLL*LSSTFK
Trigger: CTTGAAGGTGCTGGAGAGCCACAGCAGGGGGATCTT...GCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAATATCTCTCTGGCACCTGCAGTaGTGGGAGAGGCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: AGPSSPSRRAWLRSPSISLWHLQ*WERLAF
Trigger: AAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAG...AGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGGGGACAAAGCCTGGTaGCATTTTGCCCAGCACTCC +
Preference number: 4 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPGDKAW*HFAQHS
Trigger: GGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCC...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAGGTTGTGGCAGGGCCTaGGCTCACCCCATGAGGACC +
Preference number: 4 (lower is better)
Translates to: CSKGEQQSALPQTLGYREGCGRA*AHPMRT
Trigger: GGTCCTCATGGGGTGAGCCCAGGCCCTGCCACAACC...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGGTTGTGGCAGGGCCTaGGCTCACCCCATGAGGACC +
Preference number: 4 (lower is better)
Translates to: SRSSSEHSTNWVAMSGCQGCGRA*AHPMRT
Trigger: GGTCCTCATGGGGTGAGCCCAGGCCCTGCCACAACC...CTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCGCTGAGCACAGTCCCTaGGTAGAAAGCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: SCRAMGDKAWWHFAQHSTAEHSP*VESSWQ
Trigger: CTGCCATGAGCTTTCTACCCAGGGACTGTGCTCAGC...GGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCACTGCCTGGGCATGCCATaGGTAGAGGGGAACCAGGAA +
Preference number: 4 (lower is better)
Translates to: LQHLQGRGGKAQVPQLNHCLGMP*VEGNQE
Trigger: TTCCTGGTTCCCCTCTACCCATGGCATGCCCAGGCA...GTGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR CCA 90 bp TCCACGGCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAGGAATCTTGAGGTCCTaGGTGAGGAGTCAAGATGCC +
Preference number: 4 (lower is better)
Translates to: STAGPSSPSRRAWLRSPSGILRS*VRSQDA
Trigger: GGCATCTTGACTCCTCACCCAGGACCTCAAGATTCC...TGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGCCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR CCA 90 bp GTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGTTCTCCTGGAACTCCTaGGGGAGCATGACTCACACT +
Preference number: 4 (lower is better)
Translates to: VALQHLQGRGGKAQVPQLFSWNS*GSMTHT
Trigger: AGTGTGAGTCATGCTCCCCCAGGAGTTCCAGGAGAA...CAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCCTACAGCCCGCCACCTaGGCATGCACTGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ATNANPIGEGSPETCGGCLQPAT*ACTARP
Trigger: GGGCCTTGCAGTGCATGCCCAGGTGGCGGGCTGTAG...GCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp CAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCAGGCTCCAACATAGGTaGAGTCAAGGGCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: QVLQSHGGQSLVAFCPALRLQHR*SQGQFP
Trigger: GGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT...GAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp TGCTGTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACACTGGAGGCTGTGACTTaGATCCCAGGGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: CCGSPAPSRARRQSASPTLEAVT*IPGSLA
Trigger: TGCCAATGACCCTGGGATCCAAGTCACAGCCTCCAG...TGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482456.6
CDS-3UTR TCA 90 bp AGGCTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTCTCTGGAGGCTGCTGTaGCTTGGATCCCAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: RLQHRWSQGQFPIGCGSPLWRLL*LGSQGH
Trigger: ATGACCCTGGGATCCAAGTCACAGCAGCCTCCAGAG...AGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp TCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCACTCTGGAGGCTGCTGTaGCTTGGATCCCAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: SPAPSRARRQSASPTAESLWRLL*LGSQGH
Trigger: ATGACCCTGGGATCCAAGTCACAGCAGCCTCCAGAG...TGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
CDS-3UTR TCA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTGGCAGCAGAGAACACTaGAGGGTCCCGAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLGSREH*RVPRAP
Trigger: TGGTGCCCTCGGGACCCTTCAGTGTTCTCTGCTGCC...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATATCATTTCCCTTGGGCTaGGGACTCTCACCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDISFPLG*GLSPSP
Trigger: GGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAAATGA...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGGCTGAAGCTGCAGGCTaGGTTCTCCTGGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: CKALLKASCIHTSGNLMEAEAAG*VLLELL
Trigger: CAGGAGTTCCAGGAGAACTCAGCCTGCAGCTTCAGC...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp GCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAATATCTTCAGGTGGCAGGTGCTaGAGCTGCAGGCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: AGPSSPSRRAWLRSPSISSGGRC*SCRLSS
Trigger: AGAACTCAGCCTGCAGCTTCAGCACCTGCCACCTGA...AGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp CTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTCAGGGGTGAGGCTCTCTTTCCAGGAATCTTaGGGTCCAGGCCTTACCCCA +
Preference number: 4 (lower is better)
Translates to: LETGGCEGRIPCSSGVRLSFQES*GPGLTP
Trigger: TGGGGTAAGGCCTGGACCTCAAGATTCCTGGAAAGA...GAGCCTCACCCCTGAGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCATCTTTCCAGGAATCTTaGGGTCCAGGCCTTACCCCA +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPSFQES*GPGLTP
Trigger: TGGGGTAAGGCCTGGACCTCAAGATTCCTGGAAAGA...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000482456.6
CDS-3UTR TCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGTCAGGTGGCAGGTGCTaGAGCTTGTTCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWSGGRC*SLFLWR
Trigger: CCTCCAGAGGAACAAGCTTCAGCACCTGCCACCTGA...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469546.6
CDS-3UTR TCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGGTCCTCTGGAGGCTGTaGCTTGGATCCCAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWVLWRL*LGSQGH
Trigger: ATGACCCTGGGATCCAAGTCACAGCCTCCAGAGGAC...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGTTGTTCAAAGGGTGCCCTCAGCCCACTGTaGGGAAGACCCCGGACAAGG +
Preference number: 4 (lower is better)
Translates to: SLGSAQHPSLTSMSCSKGALSPL*GRPRTR
Trigger: CCTTGTCCGGGGTCTTCCGCACAGTGGGCTGAGGGC...ACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR GCA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAATGTCCTCTGGAGGCTaGTGTGACTTGGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPMSSGG*CDLDPR
Trigger: CCTGGGATCCAAGTCACAGCAGCCTCCAGAGGACAT...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp CTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCACCCGGTTCCAAGACAGTaGCTTGATGTCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LQHLQGRGGKAQVPQLNHPVPRQ*LDVLWR
Trigger: CCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGG...GTGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR GCA 90 bp TGCTGTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAAGAATGTGTTGGGCTTaGCGGTTCCAAGACAGTGCC +
Preference number: 4 (lower is better)
Translates to: CCGSPAPSRARRQSASPTRMCWA*RFQDSA
Trigger: GGCACTGTCTTGGAACCGGCAAGCCCAACACATTCT...TGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR GCA 90 bp TGTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTAGAATGTGTTGGGCTTaGCGGTTCCAAGACAGTGCC +
Preference number: 4 (lower is better)
Translates to: CGSPAPSRARRQSASPTARMCWA*RFQDSA
Trigger: GGCACTGTCTTGGAACCGGCAAGCCCAACACATTCT...AGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR GCA 90 bp GAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCTTCCCACACAACTGCCTTaGCACTGGGGTGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: EKRLKAALQGLMLWGQLLPTQLP*HWGEQK
Trigger: CTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGGG...AAGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp AGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGAGATCCCACACAACTaGCTTGCCACTGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RLVPCCPPVPCEFPACHREIPHN*LATGVS
Trigger: GCTCACCCCAGTGGCAAGGCAGTTGTGTGGGATCTC...TCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTTCCCGAGGGCACCACTaGACATCAAAGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPSRGHH*TSKHQL
Trigger: CAGCTGGTGCTTTGATGTGCAGTGGTGCCCTCGGGA...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp GCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGCGGGAGGTATCAGTGGTaGTTGTGCCACTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ARPCSKLPASTHRATSWSGRYQW*LCHLLW
Trigger: CCAGAGCAAGTGGCACAAGCACCACTGATACCTCCC...GCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAGATCCCAAGGCCTCCTaGAGCTCAGCTGATCGCATC +
Preference number: 4 (lower is better)
Translates to: AGTQLVWSQAYSITYLAADPKAS*SSADRI
Trigger: GATGCGATCAGCTGAGCTGCAGGAGGCCTTGGGATC...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTGGAGGCTGTGACGATCCCAAGGCCTCCTaGAGCTCAGCTGATCGCATC +
Preference number: 4 (lower is better)
Translates to: CWACRFQDSALMSSGGCDDPKAS*SSADRI
Trigger: GATGCGATCAGCTGAGCTGCAGGAGGCCTTGGGATC...GTCACAGCCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482456.6
CDS-3UTR GCA 90 bp AGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGCCCGCGTTTGGAGGCCTGGCTaGAGAAGGCCTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SLQDRHEAGHLAEAATARVWRPG*RRPVVC
Trigger: ACAGACAACAGGCCTTCTGCAGCCAGGCCTCCAAAC...GCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCCGGAGGTTAGTGCCCTaGTGCCCTCCTGTTCCATGC +
Preference number: 4 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGRRLVP*CPPVPC
Trigger: GCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCG...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAGCGGGGAGAAGATATCCTaGCCCAGGTCCTTACAGAGT +
Preference number: 4 (lower is better)
Translates to: CRAMGDKAWWHFAQHSTSGEKIS*PRSLQS
Trigger: ACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCC...GCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCATTCCTCTCTTGGTTCTaGTCAGCACCCATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPFLSWF*SAPIPH
Trigger: GTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAA...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTCTGCACTAGGGCAAAGGTaGAGCCCTCCCAAACCCCGG +
Preference number: 4 (lower is better)
Translates to: CPPVPCEFPACHRAREISALGQR*SPPKPR
Trigger: CCGGGGTTTGGGAGGGCTGCACCTTTGCCCTAGTGC...AGAAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp GATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGCCAAGGGTATTGGCTGGCTaGGCTCCATGCCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: DHPLSTALTGWLCQDARPRVLAG*APCLDS
Trigger: GCTGTCCAGGCATGGAGCCCAGCCAGCCAATACCCT...TGGCCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp CATCAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCAGAGGCTGCTGTGACTTaGATCCCAGGGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: HQPGSMTLTRSPCCGSPAEAAVT*IPGSLA
Trigger: TGCCAATGACCCTGGGATCCAAGTCACAGCAGCCTC...TGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
CDS-3UTR CCA 90 bp CAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCACCTGAGCACAGCACTAACTaGGTGGCTATGTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: QPGSMTLTRSPCCGSPAPEHSTN*VAMSGC
Trigger: GCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTC...AGGTGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp GCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCGCCTGTCTCATATGCTaGACTTCCCAGCTCCTACCC +
Preference number: 4 (lower is better)
Translates to: ACTARPCSKLPASTHRATACLIC*TSQLLP
Trigger: GGGTAGGAGCTGGGAAGTCCAGCATATGAGACAGGC...GGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGTTGTGCCACTTGCTCTaGCACCTGCAGTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: CKALLKASCIHTSGNLMELCHLL*HLQWWE
Trigger: CTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAA...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATATTGTGCCACTTGCTCTaGCACCTGCAGTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDILCHLL*HLQWWE
Trigger: CTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAA...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGTTGTGCCACTTGCTCTaGCACCTGCAGTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWLCHLL*HLQWWE
Trigger: CTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAA...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TTCCTGCATCCACACATCGGGCAACCTCATGGAGCCCAGCCACGACATGAGGTGTCTGTACCCCCAGCCTaGGCCAGGATAATGGCATCA +
Preference number: 4 (lower is better)
Translates to: FLHPHIGQPHGAQPRHEVSVPPA*ARIMAS
Trigger: TGATGCCATTATCCTGGCCCAGGCTGGGGGTACAGA...CACCTCATGTCGTGGCTGGGCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCACATGGGGGACAAAGCCTaGTGGCATTTTGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LQHLQGRGGKAQVPQLNHMGDKA*WHFAQH
Trigger: GTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCAT...GTGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCGGTTGTGGCAGGGCCTaGGCTCACCCCATGAGGACC +
Preference number: 4 (lower is better)
Translates to: APVSQPKTASSKRQFIPFGCGRA*AHPMRT
Trigger: GGTCCTCATGGGGTGAGCCCAGGCCCTGCCACAACC...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGAAAACCCTTGGCCTTaGAGATGGAGTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPENPWP*RWSWDL
Trigger: CAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTC...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCACCTGAAAACCCTTGGCCTTaGAGATGGAGTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: QPGSMTLTRSPCCGSPAPENPWP*RWSWDL
Trigger: CAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTC...AGGTGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAAGGGGTGAAAACCCTTaGCCTTGGAGATGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPRGENP*PWRWSW
Trigger: CCAACTCCATCTCCAAGGCCAAGGGTTTTCACCCCT...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCAAGGCAAAGGCTGGATaGCCTGGGGCCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: APVSQPKTASSKRQFIPFKAKAG*PGAQVP
Trigger: GGGCACCTGGGCCCCAGGCCATCCAGCCTTTGCCTT...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGTTGTTCAAAGGGTGCTTGCAGGAGGGGCTaGGGTGTGGGAGACCATGCG +
Preference number: 4 (lower is better)
Translates to: SLGSAQHPSLTSMSCSKGACRRG*GVGDHA
Trigger: CGCATGGTCTCCCACACCCCAGCCCCTCCTGCAAGC...ACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR CCA 90 bp GAAGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCGAGGACACTAGAGCATaGGGCACCTGGGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: EVDHPLSTALTGWLCQDAEDTRA*GTWVPW
Trigger: CCAGGGGACCCAGGTGCCCCATGCTCTAGTGTCCTC...GGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR CCA 90 bp CAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCAAGATGCCAGTGGTTaGGAGGACACTAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: QVLQSHGGQSLVAFCPALQDASG*EDTRAW
Trigger: CCATGCTCTAGTGTCCTCCCAACCACTGGCATCTTG...GAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR CCA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCGGCAGCTTGTTCCTCTaGAGGTTTCCCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGGSLFL*RFPLGA
Trigger: AGCCCCCAGGGGAAACCTCCAGAGGAACAAGCTGCC...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGGAGCATGACTCACACTaGAGACAGGGGGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWEHDSH*RQGAVR
Trigger: CCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATAGAGCATGACTCACACTaGAGACAGGGGGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDIEHDSH*RQGAVR
Trigger: CCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCATTCTCCTGGAACTCCTaGGGGAGCATGACTCACACT +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPFSWNS*GSMTHT
Trigger: AGTGTGAGTCATGCTCCCCCAGGAGTTCCAGGAGAA...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGCAGGCTGAGTTCTCCTaGAACTCCTGGGGGAGCATG +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWQAEFS*NSWGSM
Trigger: CATGCTCCCCCAGGAGTTCCAGGAGAACTCAGCCTG...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCTTCAGGCTGAGTTCTCCTaGAACTCCTGGGGGAGCATG +
Preference number: 4 (lower is better)
Translates to: EKRLKAALQGLMLWGQLLQAEFS*NSWGSM
Trigger: CATGCTCCCCCAGGAGTTCCAGGAGAACTCAGCCTG...AAGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATACAGGCTGAGTTCTCCTaGAACTCCTGGGGGAGCATG +
Preference number: 4 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDIQAEFS*NSWGSM
Trigger: CATGCTCCCCCAGGAGTTCCAGGAGAACTCAGCCTG...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GGTGAAAACCCTTGGCCTTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGAGACAGGGAGCAGCGTTaGAGAAGCGCCTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: GENPWPWRWSWDLVRRLGDREQR*RSASKL
Trigger: CAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTC...TCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGGACAGGGAGCAGCGTTaGAGAAGCGCCTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWDREQR*RSASKL
Trigger: CAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTC...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCAAGCAGGCACTCAGCTaGTTTGGAGCCAAGCCTACA +
Preference number: 4 (lower is better)
Translates to: PSGPAEPWGTKPGGILPSKQALS*FGAKPT
Trigger: TGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGCTT...GCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGCAGGCTCCAACATAGGTaGAGTCAAGGGCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: ARPCSKLPASTHRATSWSRLQHR*SQGQFP
Trigger: GGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT...GCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp TCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGTTGTTCAAAGGGTAGAATCGCTGGCCCCTaGAGCCAGGAGGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SLGSAQHPSLTSMSCSKGRIAGP*SQEVAL
Trigger: CAGGGCAACCTCCTGGCTTCAGGGGCCAGCGATTCT...ACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp ATCCCTGGGGGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGAGAATCGCTGGCCCCTaGAGCCAGGAGGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: IPGGEDILPQVLTECSIRRIAGP*SQEVAL
Trigger: CAGGGCAACCTCCTGGCTTCAGGGGCCAGCGATTCT...CCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCCCAGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGTGGCCTCCTAGCAAGAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGACTCTGGAGGCTGCTGTaGCTTGGATCCCAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: SGLLAREAAWFRPAAYERLWRLL*LGSQGH
Trigger: ATGACCCTGGGATCCAAGTCACAGCAGCCTCCAGAG...TCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGCTAGGAGGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp GCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGACTCTGGAGGCTGCTGTaGCTTGGATCCCAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: ALSWFGAKPTASHTWQQGLWRLL*LGSQGH
Trigger: ATGACCCTGGGATCCAAGTCACAGCAGCCTCCAGAG...TCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATGCCAGGCCAGGCCTaGGCAGTGCATCCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CSKGEQQSALPQTLGYREMPGQA*AVHPVA
Trigger: AGCAACAGGATGCACTGCTCAGGCCTGGCCTGGCAT...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAATGCCAGGCCAGGCCTaGGCAGTGCATCCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: HSAGLEPSLQHHIPGSKEMPGQA*AVHPVA
Trigger: AGCAACAGGATGCACTGCTCAGGCCTGGCCTGGCAT...TTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TGTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGTTGTCTGTCACTGTTaGGGTCATTTCCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: CGSPAPSRARRQSASPTAVVCHC*GHFPWA
Trigger: AGCCCAAGGGAAATGACCTCAACAGTGACAGACAAC...AGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCACTCATCAAAGAAGGCTaGGGAAGCAGAGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPLIKEG*GSRGFL
Trigger: AAGGAAGCCTCTGCTTCCTCAGCCTTCTTTGATGAG...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCTTCCGCTCCACACTCCCTaGGCACACATAACAGAGTCT +
Preference number: 4 (lower is better)
Translates to: EKRLKAALQGLMLWGQLLPLHTP*AHITES
Trigger: AGACTCTGTTATGTGTGCTCAGGGAGTGTGGAGCGG...AAGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TGCCTTGCCACTGGGGTGAGCAGAAGACAGAATGTGTTGGGCTTGCCGGTTCCACCGCTCCACACTCCCTaGGCACACATAACAGAGTCT +
Preference number: 4 (lower is better)
Translates to: CLATGVSRRQNVLGLPVPPLHTP*AHITES
Trigger: AGACTCTGTTATGTGTGCTCAGGGAGTGTGGAGCGG...TGGAACCGGCAAGCCCAACACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGGGTTGGCATACTGAGTaGCCCTGTAGGTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CKALLKASCIHTSGNLMEGWHTE*PCRLWQ
Trigger: CTGCCACAACCTACAGGGTCACTCAGTATGCCAACC...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGGAGTTGGGACCTGGTaGGAAGGCTGGGATCCCAAT +
Preference number: 4 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPGVGTW*EGWDPN
Trigger: ATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCC...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTGTGATGACTGAGGGGTaGAAACCCTTGGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPVMTEG*KPLALE
Trigger: CTCCAAGGCCAAGGGTTTTCACCCCTCAGTCATCAC...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCGTGATGACTGAGGGGTaGAAACCCTTGGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLVMTEG*KPLALE
Trigger: CTCCAAGGCCAAGGGTTTTCACCCCTCAGTCATCAC...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCATCGCTGGTGATGACTaGGGGGTGAAAACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLIAGDD*GVKTLG
Trigger: GCCAAGGGTTTTCACCCCTCAGTCATCACCAGCGAT...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTGGAGTCAAGGGCAGTCAGGTGGCAGGTGCTaGAGCTGCAGGCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: HRRNGLGLRLQHRWSQGQSGGRC*SCRLSS
Trigger: AGAACTCAGCCTGCAGCTTCAGCACCTGCCACCTGA...CTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp GTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGTCAGGTGGCAGGTGCTaGAGCTGCAGGCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: VDHPLSTALTGWLCQDARSGGRC*SCRLSS
Trigger: AGAACTCAGCCTGCAGCTTCAGCACCTGCCACCTGA...CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR TCA 90 bp GCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCCTGCTCTTCAAGGACTaGTGCTCTGGGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ATNANPIGEGSPETCGGCLLFKD*CSGGSS
Trigger: GGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAG...GCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAAGCCACGACATGAGGTaGGAGTGTCCCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPSHDMR*ECPLTE
Trigger: CTCTGTGAGGGGACACTCTCACCTCATGTCGTGGCT...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp ACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTAGCCACGACATGAGGTaGGAGTGTCCCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: TGSSVGEAPQSCSSRTDASHDMR*ECPLTE
Trigger: CTCTGTGAGGGGACACTCTCACCTCATGTCGTGGCT...AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGTTGTTCAAAGGGTAGCTGGACACCTCGCTaGAGCTGCTACAGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SLGSAQHPSLTSMSCSKGSWTPR*SCYSPP
Trigger: TGGCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCT...ACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TCCCTCACGTCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGCCCTGCCTCCAGGCCTaGGAGTGTCTTGGACAGATC +
Preference number: 4 (lower is better)
Translates to: SLTSMSCSKGEQQSALPQPCLQA*ECLGQI
Trigger: GATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGG...CTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GGGCCCTGGTCTCCCAATCTCCAATATCTCCGCTTCTCAAGCCATATGTCTCTCGGGTCCCACGGTCCCTaGAATACTACAGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: GPWSPNLQYLRFSSHMSLGSHGP*NTTGPI
Trigger: GATGGGCCCTGTAGTATTTCAGGGACCGTGGGACCC...GAGAGACATATGGCTTGAGAAGCGGAGATATTGGAGATTGGGAGACCAGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp GTTCCGGCACAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCGAGGCTGGCCTTTGCTaGAGGAAGAGGAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: VPAQDLAVLSTSEQQLSIEAGLC*RKRRSG
Trigger: CCCAGATCTCCTCTTCCTTCAGCAAAGGCCAGCCTC...GATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR TCA 90 bp TCCCTCACGTCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGTCAGGTGGCAGGTGCTaGAGCTGCTGCAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SLTSMSCSKGEQQSALPQSGGRC*SCCRLS
Trigger: ACTCAGCCTGCAGCAGCTTCAGCACCTGCCACCTGA...CTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482456.6
CDS-3UTR GCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCACTGAAGCCAGGAGGTTaGCCTGGAAAGGATTCAAGT +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPLKPGG*PGKDSS
Trigger: ACTTGAATCCTTTCCAGGGCAACCTCCTGGCTTCAG...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000469546.6
CDS-3UTR GCA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTCCGGTTCCAAGACAGTaGCTTGATGTCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPPVPRQ*LDVLWR
Trigger: CCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGG...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGCCGGTTCCAAGACAGTaGCTTGATGTCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWPVPRQ*LDVLWR
Trigger: CCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGG...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGCCCACACAACTGCCTTaGCACTGGGGTGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RQSFLSWFCSAPIPHVHEPTQLP*HWGEQK
Trigger: CTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGGG...CTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCCCAGCAAAGGGGTCCCACGGTCCCTGAAATACTACAGGGCCCATCCAATAACTCCCGAGGGCACCACTaGACATCAAAGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: SQQRGPTVPEILQGPSNNSRGHH*TSKHQL
Trigger: CAGCTGGTGCTTTGATGTGCAGTGGTGCCCTCGGGA...GTTATTGGATGGGCCCTGTAGTATTTCAGGGACCGTGGGACCCCTTTGCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp AGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGGGAGGTATCAGTGGTaGTTGTGCCACTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RLVPCCPPVPCEFPACHRGRYQW*LCHLLW
Trigger: CCAGAGCAAGTGGCACAAGCACCACTGATACCTCCC...TCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GAGGACAGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGATCCCAAGGCCTCCTaGAGCTCAGCTGATCGCATC +
Preference number: 4 (lower is better)
Translates to: EDSLQDRHEAGHLAEAATDPKAS*SSADRI
Trigger: GATGCGATCAGCTGAGCTGCAGGAGGCCTTGGGATC...TGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTTGCCCTCCTGTTCCATaGGAGTTCCCAGCATGTCAC +
Preference number: 4 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPACPPVP*EFPACH
Trigger: GTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp AGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGATGCCCTCCTGTTCCATaGGAGTTCCCAGCATGTCAC +
Preference number: 4 (lower is better)
Translates to: RLVPCCPPVPCEFPACHRCPPVP*EFPACH
Trigger: GTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA...TCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAGGCCTGGGGCCCAGGTaGCCTGTAGTCACTTATATT +
Preference number: 4 (lower is better)
Translates to: AGTQLVWSQAYSITYLAAGLGPR*PVVTYI
Trigger: AATATAAGTGACTACAGGGCACCTGGGCCCCAGGCC...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGGCCTGGGGCCCAGGTaGCCTGTAGTCACTTATATT +
Preference number: 4 (lower is better)
Translates to: LQGPAQSFLHPHIGQPHGGLGPR*PVVTYI
Trigger: AATATAAGTGACTACAGGGCACCTGGGCCCCAGGCC...TCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCTTGGCCTGGGGCCCAGGTaGCCTGTAGTCACTTATATT +
Preference number: 4 (lower is better)
Translates to: EKRLKAALQGLMLWGQLLGLGPR*PVVTYI
Trigger: AATATAAGTGACTACAGGGCACCTGGGCCCCAGGCC...AAGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCGGTGAGGAGTCAAGATaGCAGTGGTTGGGAGGACAC +
Preference number: 4 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLGEESR*QWLGGH
Trigger: GTGTCCTCCCAACCACTGGCATCTTGACTCCTCACC...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR GCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCTCCAGACGCTGGGCTaGCTCTTCCAGCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPALQTLG*LFQLPF
Trigger: AAAAGGAAGCTGGAAGAGGCAGCCCAGCGTCTGGAG...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp TTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGCTCCAGACGCTGGGCTaGCTCTTCCAGCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: FPWAEDSHLAPRHSSTMWLQTLG*LFQLPF
Trigger: AAAAGGAAGCTGGAAGAGGCAGCCCAGCGTCTGGAG...CCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CCACACAACTGCCTTGCCACTGGGGTGAGCAGAAGACAGAATGTGTTGGGCTTGCACCTGGGCATGCACTaGAAGGCCCTGCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PHNCLATGVSRRQNVLGLHLGMH*KALLKA
Trigger: AGCTTTGAGCAGGGCCTTGCAGTGCATGCCCAGGTG...CAAGCCCAACACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCACCTGGTCTATCCTGTAGGTaGCAGAAAACTGACATGGCC +
Preference number: 4 (lower is better)
Translates to: QPGSMTLTRSPCCGSPAPGLSCR*QKTDMA
Trigger: GGCCATGTCAGTTTTCTGCCACCTACAGGATAGACC...AGGTGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp AGTGGCCTCCTAGCAAGAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGACCATGCCTGGACAGCTaGCCGCTCAAGTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SGLLAREAAWFRPAAYERPCLDS*PLKFLQ
Trigger: CTGAAGGAACTTGAGCGGCCAGCTGTCCAGGCATGG...TCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGCTAGGAGGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGCCACCATGCCTGGACAGCTaGCCGCTCAAGTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: DHPLSTALTGWLCQDARPPCLDS*PLKFLQ
Trigger: CTGAAGGAACTTGAGCGGCCAGCTGTCCAGGCATGG...TGGCCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp GCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGACCATGCCTGGACAGCTaGCCGCTCAAGTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ALSWFGAKPTASHTWQQGPCLDS*PLKFLQ
Trigger: CTGAAGGAACTTGAGCGGCCAGCTGTCCAGGCATGG...TCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp ATCCCTGGGGGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGCTGGGCTCCATGCCTaGACAGCTGGCCGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: IPGGEDILPQVLTECSIRAGLHA*TAGRSS
Trigger: ACTTGAGCGGCCAGCTGTCCAGGCATGGAGCCCAGC...CCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCCCAGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCAGATTTCAGAATCGCTaGCCCCTGAAGCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ACTARPCSKLPASTHRATRFQNR*PLKPGG
Trigger: ACCTCCTGGCTTCAGGGGCCAGCGATTCTGAAATCT...GGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTGGAGGCTGCTGTGACAGATTTCAGAATCGCTaGCCCCTGAAGCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: WACRFQDSALMSSGGCCDRFQNR*PLKPGG
Trigger: ACCTCCTGGCTTCAGGGGCCAGCGATTCTGAAATCT...GTCACAGCAGCCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
CDS-3UTR CCA 90 bp GCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGCAGATTTCAGAATCGCTaGCCCCTGAAGCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ARPCSKLPASTHRATSWSRFQNR*PLKPGG
Trigger: ACCTCCTGGCTTCAGGGGCCAGCGATTCTGAAATCT...GCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TTCCTGCATCCACACATCGGGCAACCTCATGGAGCCCAGCCACGACATGAGGTGCAACTGCCTTGCCACTaGGGTGAGCAGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: FLHPHIGQPHGAQPRHEVQLPCH*GEQKTE
Trigger: TTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTG...CACCTCATGTCGTGGCTGGGCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CATCAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCACAACTGCCTTGCCACTaGGGTGAGCAGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: HQPGSMTLTRSPCCGSPAQLPCH*GEQKTE
Trigger: TTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTG...TGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp CATCAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCAACAGCACTAACTGGGTaGCTATGTCAGGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: HQPGSMTLTRSPCCGSPATALTG*LCQDAR
Trigger: CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGT...TGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp CATCAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCAGAGCACAGCACTAACTaGGTGGCTATGTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: HQPGSMTLTRSPCCGSPAEHSTN*VAMSGC
Trigger: GCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTC...TGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTAAGATCCCCCTGCTGTaGCTCTCCAGCACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPKIPLL*LSSTFK
Trigger: CTTGAAGGTGCTGGAGAGCCACAGCAGGGGGATCTT...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAAAGATCCCCCTGCTGTaGCTCTCCAGCACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LQGPAQSFLHPHIGQPHGKIPLL*LSSTFK
Trigger: CTTGAAGGTGCTGGAGAGCCACAGCAGGGGGATCTT...TCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GGTGAAAACCCTTGGCCTTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGACAGGGGAGGTATCAGTaGTGCTTGTGCCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: GENPWPWRWSWDLVRRLGQGRYQ*CLCHLL
Trigger: GAGCAAGTGGCACAAGCACCACTGATACCTCCCCTG...TCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAATATCTCAGGGGAGGTATCAGTaGTGCTTGTGCCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: AGPSSPSRRAWLRSPSISQGRYQ*CLCHLL
Trigger: GAGCAAGTGGCACAAGCACCACTGATACCTCCCCTG...AGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGGTGTGTTTGGAGGCCTaGCTGCAGAAGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWVCLEA*LQKACC
Trigger: ACAACAGGCCTTCTGCAGCCAGGCCTCCAAACACAC...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTCAGGGGTGAGGCTCACACATAACAGAGTCTaGCTTCGGAGGTTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LETGGCEGRIPCSSGVRLTHNRV*LRRLVP
Trigger: GGGCACTAACCTCCGAAGCCAGACTCTGTTATGTGT...GAGCCTCACCCCTGAGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCCTTGGAGATGGAGTTaGGACCTGGTGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLPWRWS*DLVRRL
Trigger: CAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGG...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGCCCGCAGGGGTGAAAACCCTTaGCCTTGGAGATGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SLQDRHEAGHLAEAATARRGENP*PWRWSW
Trigger: CCAACTCCATCTCCAAGGCCAAGGGTTTTCACCCCT...GCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGAGTCCCCTGGAAGGTATaGCACAGGGAAGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RVNSSQLYPRPWATEKYGVPWKV*HREACR
Trigger: CCTGCAAGCTTCCCTGTGCCATACCTTCCAGGGGAC...TCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR CCA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGTCCCCTGGAAGGTATaGCACAGGGAAGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPVPWKV*HREACR
Trigger: CCTGCAAGCTTCCCTGTGCCATACCTTCCAGGGGAC...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR CCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGGAGGACACTAGAGCATaGGGCACCTGGGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKEDTRA*GTWVPW
Trigger: CCAGGGGACCCAGGTGCCCCATGCTCTAGTGTCCTC...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR CCA 90 bp TCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCTCCTTGCACCTGAGCCTACAGCCCGCCACCTaGGCATGCACTGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SCSKVTCLMYSLISLHLSLQPAT*ACTARP
Trigger: GGGCCTTGCAGTGCATGCCCAGGTGGCGGGCTGTAG...GCTCAGGTGCAAGGAGATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACTACAGCCCGCCACCTaGGCATGCACTGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: EYVSSKASASLQFFRLQVLQPAT*ACTARP
Trigger: GGGCCTTGCAGTGCATGCCCAGGTGGCGGGCTGTAG...TACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCGTTCCCCATAGGCTGTaGTTCCCCTGCTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGVPHRL*FPCSCL
Trigger: GAGACAGGAGCAGGGGAACCACAGCCTATGGGGAAC...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGACTGGAGGCTGTGACTTaGATCCCAGGGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: LQGPAQSFLHPHIGQPHGLEAVT*IPGSLA
Trigger: TGCCAATGACCCTGGGATCCAAGTCACAGCCTCCAG...TCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
3UTR CAA 72 bp GCCACTGGGGTGAGCAGAAGACAGAATGTGTTGGGCTaGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ATGVSRRQNVLG*PVPRQCLDVLW
Trigger: CCAGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCTGCTCACCCCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR TCA 90 bp TCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACACACCATCAAGTCGAGGGCTCTaGCAGCCCCCGTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SVAKPVPLSSSSGYRYTPSSRGL*QPPCAS
Trigger: AGAAGCACACGGGGGCTGTCAGAGCCCTCGACTTGA...TGGTGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000469546.6
CDS-3UTR TCA 90 bp GTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGTCCAAGACAGTGCCTTaGTGTCCTCTGGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VDHPLSTALTGWLCQDARSKTVP*CPLEAA
Trigger: AGCAGCCTCCAGAGGACATCAAGGCACTGTCTTGGA...CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
CDS-3UTR TCA 90 bp AGCAGAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCATGCCAGGCCAGGCCTaGGCAGTGCATCCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SRRQNVLGLPVPRQCLDVMPGQA*AVHPVA
Trigger: AGCAACAGGATGCACTGCTCAGGCCTGGCCTGGCAT...GACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR TCA 90 bp CAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCAGCCTGGCTCGCAAGTCCCACAGCTaGATCACGGGAAGTCGATCA +
Preference number: 4 (lower is better)
Translates to: QDLAVLSTSEQQLSISLARKSHS*ITGSRS
Trigger: TGATCGACTTCCCGTGATTCAGCTGTGGGACTTGCG...AGCCAGGCTGATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR TCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCTCCTGCAGCTCAGCTaGTCGCATCAGGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPALLQLS*SHQEFR
Trigger: TCTGAATTCCTGATGCGATCAGCTGAGCTGCAGGAG...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp CATCAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCACTCATCAAAGAAGGCTaGGGAAGCAGAGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: HQPGSMTLTRSPCCGSPALIKEG*GSRGFL
Trigger: AAGGAAGCCTCTGCTTCCTCAGCCTTCTTTGATGAG...TGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCACCTCATCAAAGAAGGCTaGGGAAGCAGAGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LQHLQGRGGKAQVPQLNHLIKEG*GSRGFL
Trigger: AAGGAAGCCTCTGCTTCCTCAGCCTTCTTTGATGAG...GTGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCCAAGGAGTCATGTTCTaGGGGACCAGCTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: ACTARPCSKLPASTHRATQGVMF*GTSSSK
Trigger: CTTTGATGAGCTGGTCCCTCAGAACATGACTCCTTG...GGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTGGAGTCAAGGGCAGCCGCTCCACACTCCCTaGGCACACATAACAGAGTCT +
Preference number: 4 (lower is better)
Translates to: HRRNGLGLRLQHRWSQGQPLHTP*AHITES
Trigger: AGACTCTGTTATGTGTGCTCAGGGAGTGTGGAGCGG...CTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp GAGGACAGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACACCGCTCCACACTCCCTaGGCACACATAACAGAGTCT +
Preference number: 4 (lower is better)
Translates to: EDSLQDRHEAGHLAEAATPLHTP*AHITES
Trigger: AGACTCTGTTATGTGTGCTCAGGGAGTGTGGAGCGG...TGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGTGGCCTCCTAGCAAGAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGACCGCTCCACACTCCCTaGGCACACATAACAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SGLLAREAAWFRPAAYERPLHTP*AHITES
Trigger: AGACTCTGTTATGTGTGCTCAGGGAGTGTGGAGCGG...TCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGCTAGGAGGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGAGGTTGGCATACTGAGTaGCCCTGTAGGTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RVNSSQLYPRPWATEKYGGWHTE*PCRLWQ
Trigger: CTGCCACAACCTACAGGGTCACTCAGTATGCCAACC...TCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGCCACCTTCTTCTGTGATGACTGAGGGGTaGAAACCCTTGGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: EDSHLAPRHSSTMWPPSSVMTEG*KPLALE
Trigger: CTCCAAGGCCAAGGGTTTTCACCCCTCAGTCATCAC...AGAAGAAGGTGGCCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTCTGCTCTTCAAGGACTaGTGCTCTGGGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EDRMCWACRFQDSALMSSLLFKD*CSGGSS
Trigger: GGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAG...AGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCAGCCCAGCCACGACATaGGGTGAGAGTGTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: SATNANPIGEGSPETCGGSPATT*GESVPS
Trigger: TGAGGGGACACTCTCACCTCATGTCGTGGCTGGGCT...GCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp TTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATGAGCCCAGCCACGACATaGGGTGAGAGTGTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LEMELGPGEKAGIPICKMSPATT*GESVPS
Trigger: TGAGGGGACACTCTCACCTCATGTCGTGGCTGGGCT...CATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAACAAAAGACCCACATaGTGGGTCACAGCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: SCRAMGDKAWWHFAQHSTNKRPT*WVTAEV
Trigger: TACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTT...GGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TTCCTGCATCCACACATCGGGCAACCTCATGGAGCCCAGCCACGACATGAGGTGGAGTTGTTCAAAGGGTaGACAGCAGTCAGCTCTACC +
Preference number: 4 (lower is better)
Translates to: FLHPHIGQPHGAQPRHEVELFKG*TAVSST
Trigger: GGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTC...CACCTCATGTCGTGGCTGGGCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GAAGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCTCATCTCCTTGCACCTaGGCTGTCTCTGGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: EVDHPLSTALTGWLCQDASSPCT*AVSGGL
Trigger: AAGCCCGCCAGAGACAGCTCAGGTGCAAGGAGATGA...GGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCATGTCCTCTGGAGGCTaGTGTGACTTGGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGMSSGG*CDLDPR
Trigger: CCTGGGATCCAAGTCACAGCAGCCTCCAGAGGACAT...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp GATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGCCAATGTCCTCTGGAGGCTaGTGTGACTTGGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: DHPLSTALTGWLCQDARPMSSGG*CDLDPR
Trigger: CCTGGGATCCAAGTCACAGCAGCCTCCAGAGGACAT...TGGCCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
CDS-3UTR GCA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGAATGTGTTGGGCTTaGCGGTTCCAAGACAGTGCC +
Preference number: 4 (lower is better)
Translates to: AGTQLVWSQAYSITYLAARMCWA*RFQDSA
Trigger: GGCACTGTCTTGGAACCGGCAAGCCCAACACATTCT...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAACCCACACAACTGCCTTaGCACTGGGGTGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: CSKGEQQSALPQTLGYREPTQLP*HWGEQK
Trigger: CTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGGG...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp AGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGCCCACACAACTGCCTTaGCACTGGGGTGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SRSSSEHSTNWVAMSGCQPTQLP*HWGEQK
Trigger: CTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGGG...CTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR GCA 90 bp CAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGAGGGGTGCTTGTGCCACTTaGTCTGGCACCTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: QMQIQSEKVALRHVVAARGACAT*SGTCSG
Trigger: ACCACTGCAGGTGCCAGAGCAAGTGGCACAAGCACC...CCTCGCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp TGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTCTGGTGCTTGTGCCACTTaGTCTGGCACCTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CPPVPCEFPACHRAREISGACAT*SGTCSG
Trigger: ACCACTGCAGGTGCCAGAGCAAGTGGCACAAGCACC...AGAAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGTATCAGTGGTGCTTGTaGCACTTGCTCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWYQWCL*HLLWHL
Trigger: CAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATA...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp AGTGGCCTCCTAGCAAGAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGCCCTCCTGTTCCATaGGAGTTCCCAGCATGTCAC +
Preference number: 4 (lower is better)
Translates to: SGLLAREAAWFRPAAYERCPPVP*EFPACH
Trigger: GTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA...TCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGCTAGGAGGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCCCTCACGTCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGAGGTTAGTGCCCTGCTaGCCTCCTGTTCCATGCGAG +
Preference number: 4 (lower is better)
Translates to: SLTSMSCSKGEQQSALPQRLVPC*PPVPCE
Trigger: CTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT...CTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCCGGAGGTTAGTGCCCTaGTGCCCTCCTGTTCCATGC +
Preference number: 4 (lower is better)
Translates to: APVSQPKTASSKRQFIPFRRLVP*CPPVPC
Trigger: GCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCG...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGCATCAAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGGGGTGTGGGAGACCATaGGGCCGGGACCTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: CIKDSATNANPIGEGSPEGCGRP*GRDLVV
Trigger: GACCACTAGGTCCCGGCCGCATGGTCTCCCACACCC...CTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTTGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR GCA 90 bp TGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTCTCACCTGGGCATGCACTaGAAGGCCCTGCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: CPPVPCEFPACHRAREISHLGMH*KALLKA
Trigger: AGCTTTGAGCAGGGCCTTGCAGTGCATGCCCAGGTG...AGAAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCGAAGAACTGATTCTATaGCCTGCCTCCAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLEELIL*PASRPE
Trigger: CTCAGGCCTGGAGGCAGGGCATAGAATCAGTTCTTC...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGATTCCTCTCTTGGTTCTaGTCAGCACCCATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LQGPAQSFLHPHIGQPHGFLSWF*SAPIPH
Trigger: GTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAA...TCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCCCATCAATATCTGGCTaGAGAAGGCCTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: PSGPAEPWGTKPGGILPSPSISG*RRPVVC
Trigger: ACAGACAACAGGCCTTCTGCAGCCAGATATTGATGG...GCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469546.6
CDS-3UTR GCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGTCCAGGGAGCATCTGTaGGGAAGACCCCGGACAAGG +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKSREHL*GRPRTR
Trigger: CCTTGTCCGGGGTCTTCCGCACAGATGCTCCCTGGA...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482456.6
CDS-3UTR CCA 90 bp CAAGCTCCTGTTAAGAACCATCACCTTCTCCATCAGGTCCTGCAGAGCCATGGGCCATGCCTGGACAGCTaGCCGCTCAAGTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QAPVKNHHLLHQVLQSHGPCLDS*PLKFLQ
Trigger: CTGAAGGAACTTGAGCGGCCAGCTGTCCAGGCATGG...CCCATGGCTCTGCAGGACCTGATGGAGAAGGTGATGGTTCTTAACAGGAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCAGAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCCCATGCCTGGACAGCTaGCCGCTCAAGTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AEDRMCWACRFQDSALMSPCLDS*PLKFLQ
Trigger: CTGAAGGAACTTGAGCGGCCAGCTGTCCAGGCATGG...GGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTGCTGGGCTCCATGCCTaGACAGCTGGCCGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPAGLHA*TAGRSS
Trigger: ACTTGAGCGGCCAGCTGTCCAGGCATGGAGCCCAGC...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCAGGGTATTGGCTGGCTaGGCTCCATGCCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: APVSQPKTASSKRQFIPFRVLAG*APCLDS
Trigger: GCTGTCCAGGCATGGAGCCCAGCCAGCCAATACCCT...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GGTCCCACGGTCCCTGAAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTAGGGTATTGGCTGGCTaGGCTCCATGCCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: GPTVPEILQGPSNNKSQGRVLAG*APCLDS
Trigger: GCTGTCCAGGCATGGAGCCCAGCCAGCCAATACCCT...ACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTTCAGGGACCGTGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATAGAGGAATCTAGCTGTTaGGCAGATGTTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDIEESSC*ADVPVA
Trigger: GGCCACAGGAACATCTGCCCAACAGCTAGATTCCTC...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAATATCTGAGGAATCTAGCTGTTaGGCAGATGTTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: AGPSSPSRRAWLRSPSISEESSC*ADVPVA
Trigger: GGCCACAGGAACATCTGCCCAACAGCTAGATTCCTC...AGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCAGAGGAATCTAGCTGTTaGGCAGATGTTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SPAPSRARRQSASPTAESEESSC*ADVPVA
Trigger: GGCCACAGGAACATCTGCCCAACAGCTAGATTCCTC...TGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCGAGGAATCTAGCTGTTaGGCAGATGTTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLEESSC*ADVPVA
Trigger: GGCCACAGGAACATCTGCCCAACAGCTAGATTCCTC...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGAGGCTGCTGTGACTTaGATCCCAGGGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPEAAVT*IPGSLA
Trigger: TGCCAATGACCCTGGGATCCAAGTCACAGCAGCCTC...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCAGCCTGGCTGAGGCTGCTGTGACTTaGATCCCAGGGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: QDLAVLSTSEQQLSISLAEAAVT*IPGSLA
Trigger: TGCCAATGACCCTGGGATCCAAGTCACAGCAGCCTC...AGCCAGGCTGATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
CDS-3UTR CCA 90 bp CATCAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCAGAAGACAGAATGTGTTaGGCTTGCCGGTTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: HQPGSMTLTRSPCCGSPAEDRMC*ACRFQD
Trigger: GTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC...TGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp GGTGAAAACCCTTGGCCTTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGACAACTGCCTTGCCACTaGGGTGAGCAGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: GENPWPWRWSWDLVRRLGQLPCH*GEQKTE
Trigger: TTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTG...TCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TGCCTTGCCACTGGGGTGAGCAGAAGACAGAATGTGTTGGGCTTGCCGGTTCCACAACTGCCTTGCCACTaGGGTGAGCAGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: CLATGVSRRQNVLGLPVPQLPCH*GEQKTE
Trigger: TTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTG...TGGAACCGGCAAGCCCAACACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGACAGCACTAACTGGGTaGCTATGTCAGGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWTALTG*LCQDAR
Trigger: CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGT...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTGAGCACAGCACTAACTaGGTGGCTATGTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPAEHSTN*VAMSGC
Trigger: GCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTC...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTGGAGTCAAGGGCAGAAGATCCCCCTGCTGTaGCTCTCCAGCACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: HRRNGLGLRLQHRWSQGQKIPLL*LSSTFK
Trigger: CTTGAAGGTGCTGGAGAGCCACAGCAGGGGGATCTT...CTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp GATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGCCAAAGATCCCCCTGCTGTaGCTCTCCAGCACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: DHPLSTALTGWLCQDARPKIPLL*LSSTFK
Trigger: CTTGAAGGTGCTGGAGAGCCACAGCAGGGGGATCTT...TGGCCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp CCACACAACTGCCTTGCCACTGGGGTGAGCAGAAGACAGAATGTGTTGGGCTTGGCCTGTCTCATATGCTaGACTTCCCAGCTCCTACCC +
Preference number: 4 (lower is better)
Translates to: PHNCLATGVSRRQNVLGLACLIC*TSQLLP
Trigger: GGGTAGGAGCTGGGAAGTCCAGCATATGAGACAGGC...CAAGCCCAACACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGCTCTGGCACCTGCAGTaGTGGGAGAGGCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKLWHLQ*WERLAF
Trigger: AAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAG...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCCACTCTTCAACCATGTaGCCACCTTCTTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PSGPAEPWGTKPGGILPSHSSTM*PPSSEA
Trigger: AGCTTCAGAAGAAGGTGGCCACATGGTTGAAGAGTG...GCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGCCACCTTCTTCTTCTGTACCCCCAGCCTaGGCCAGGATAATGGCATCA +
Preference number: 4 (lower is better)
Translates to: EDSHLAPRHSSTMWPPSSSVPPA*ARIMAS
Trigger: TGATGCCATTATCCTGGCCCAGGCTGGGGGTACAGA...AGAAGAAGGTGGCCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAGGGGACAAAGCCTGGTaGCATTTTGCCCAGCACTCC +
Preference number: 4 (lower is better)
Translates to: HSAGLEPSLQHHIPGSKEGDKAW*HFAQHS
Trigger: GGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCC...TTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAGGACAGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAATGGGGGACAAAGCCTaGTGGCATTTTGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: EDSLQDRHEAGHLAEAATMGDKA*WHFAQH
Trigger: GTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCAT...TGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCTGTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCGCTGAGCACAGTCCCTaGGTAGAAAGCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGAEHSP*VESSWQ
Trigger: CTGCCATGAGCTTTCTACCCAGGGACTGTGCTCAGC...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAAAAGGGGGAGACTGTTaGCCCAAGACAGCAGAACCT +
Preference number: 4 (lower is better)
Translates to: LQGPAQSFLHPHIGQPHGKGGDC*PKTAEP
Trigger: AGGTTCTGCTGTCTTGGGCCAACAGTCTCCCCCTTT...TCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GTTCCGGCACAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCCCTTGGAGATGGAGTTaGGACCTGGTGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: VPAQDLAVLSTSEQQLSIPWRWS*DLVRRL
Trigger: CAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGG...GATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGGAAAACCCTTGGCCTTaGAGATGGAGTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWENPWP*RWSWDL
Trigger: CAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTC...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TGCATCAAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGGCTTGCAGGAGGGGCTaGGGTGTGGGAGACCATGCG +
Preference number: 4 (lower is better)
Translates to: CIKDSATNANPIGEGSPEACRRG*GVGDHA
Trigger: CGCATGGTCTCCCACACCCCAGCCCCTCCTGCAAGC...CTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTTGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR CCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGGGCACCTGGGTCCCCTaGAAGGTATGGCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRGTWVP*KVWHRE
Trigger: TTCCCTGTGCCATACCTTCCAGGGGACCCAGGTGCC...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR CCA 90 bp AAGGAGTCATGTTCTGAGGGACCAGCTCATCAAAGAAGGCTGAGGAAGCAGAGGGGCACCTGGGTCCCCTaGAAGGTATGGCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: KESCSEGPAHQRRLRKQRGTWVP*KVWHRE
Trigger: TTCCCTGTGCCATACCTTCCAGGGGACCCAGGTGCC...CCTCTGCTTCCTCAGCCTTCTTTGATGAGCTGGTCCCTCAGAACATGACTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR CCA 90 bp ATCCCTGGGGGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGGCAGCTTGTTCCTCTaGAGGTTTCCCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: IPGGEDILPQVLTECSIRGSLFL*RFPLGA
Trigger: AGCCCCCAGGGGAAACCTCCAGAGGAACAAGCTGCC...CCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCCCAGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCGGCAGCTTGTTCCTCTaGAGGTTTCCCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RRQNVLGLPVPRQCLDVLGSLFL*RFPLGA
Trigger: AGCCCCCAGGGGAAACCTCCAGAGGAACAAGCTGCC...GAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGGTGAGGCTCATAACTaGAGCAGTAATTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPGEAHN*SSNWCW
Trigger: CCAGCACCAATTACTGCTCCAGTTATGAGCCTCACC...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CATCAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCAGGTGAGGCTCATAACTaGAGCAGTAATTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HQPGSMTLTRSPCCGSPAGEAHN*SSNWCW
Trigger: CCAGCACCAATTACTGCTCCAGTTATGAGCCTCACC...TGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGCGCAAGAGAGGCTGCCTaGTTTAGACCAGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: ARPCSKLPASTHRATSWSAREAA*FRPAAY
Trigger: ATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGC...GCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGCCACCTTCTTCTGGCACTCAGCTGGTTTaGAGCCAAGCCTACAGCATC +
Preference number: 4 (lower is better)
Translates to: EDSHLAPRHSSTMWPPSSGTQLV*SQAYSI
Trigger: GATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCC...AGAAGAAGGTGGCCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAGCATGACTCACACTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTGGCACTCAGCTGGTTTaGAGCCAAGCCTACAGCATC +
Preference number: 4 (lower is better)
Translates to: EHDSHWRQGAVREESLVAGTQLV*SQAYSI
Trigger: GATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCC...AGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTAAGCAGGCACTCAGCTaGTTTGGAGCCAAGCCTACA +
Preference number: 4 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPKQALS*FGAKPT
Trigger: TGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGCTT...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAAAGCAGGCACTCAGCTaGTTTGGAGCCAAGCCTACA +
Preference number: 4 (lower is better)
Translates to: LQGPAQSFLHPHIGQPHGKQALS*FGAKPT
Trigger: TGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGCTT...TCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGGGCCTGAGAGTGTCTTaGACAGATCCTAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FPWAEDSHLAPRHSSTMWGLRVS*TDPRRP
Trigger: TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCC...CCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGTTCCCCATAGGCTGTaGTTCCCCTGCTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ATNANPIGEGSPETCGGCVPHRL*FPCSCL
Trigger: GAGACAGGAGCAGGGGAACCACAGCCTATGGGGAAC...GCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp AGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGTTCCCCATAGGCTGTaGTTCCCCTGCTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SRSSSEHSTNWVAMSGCQVPHRL*FPCSCL
Trigger: GAGACAGGAGCAGGGGAACCACAGCCTATGGGGAAC...CTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR TCA 90 bp GTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGCCAGAGAAGGGTCCCTaGAATCAACCTCAAATATTT +
Preference number: 4 (lower is better)
Translates to: VALQHLQGRGGKAQVPQLPEKGP*NQPQIF
Trigger: AAATATTTGAGGTTGATTTCAGGGACCCTTCTCTGG...CAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR TCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTGTGTGCTTCTGTTTCTaGGCAATCACAGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPAVCFCF*AITGSF
Trigger: GAAGGAGCCTGTGATTGCTCAGAAACAGAAGCACAC...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR TCA 90 bp AATTTCTCTGTGCCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCAGAATCGCTGGCCCCTaGAGCCAGGAGGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: NFSVPEYVSSKASASLQFRIAGP*SQEVAL
Trigger: CAGGGCAACCTCCTGGCTTCAGGGGCCAGCGATTCT...GAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAATCCAAGACAGTGCCTTaGTGTCCTCTGGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CSKGEQQSALPQTLGYRESKTVP*CPLEAA
Trigger: AGCAGCCTCCAGAGGACATCAAGGCACTGTCTTGGA...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTTCCAAGACAGTGCCTTaGTGTCCTCTGGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLSKTVP*CPLEAA
Trigger: AGCAGCCTCCAGAGGACATCAAGGCACTGTCTTGGA...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp CAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGAGGCGCAAGTCCCACAGCTaGATCACGGGAAGTCGATCA +
Preference number: 4 (lower is better)
Translates to: QMQIQSEKVALRHVVAARRKSHS*ITGSRS
Trigger: TGATCGACTTCCCGTGATTCAGCTGTGGGACTTGCG...CCTCGCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp TTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGGATTCTGTGGTGACTTaGCTGATGAAGACTAGGCGG +
Preference number: 4 (lower is better)
Translates to: FPWAEDSHLAPRHSSTMWDSVVT*LMKTRR
Trigger: CCGCCTAGTCTTCATCAGTCAAGTCACCACAGAATC...CCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGCTCCTGCAGCTCAGCTaGTCGCATCAGGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: RQSFLSWFCSAPIPHVHELLQLS*SHQEFR
Trigger: TCTGAATTCCTGATGCGATCAGCTGAGCTGCAGGAG...CTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACTCCTGCAGCTCAGCTaGTCGCATCAGGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: RVNSSQLYPRPWATEKYGLLQLS*SHQEFR
Trigger: TCTGAATTCCTGATGCGATCAGCTGAGCTGCAGGAG...TCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGGTTGTCTGTCACTGTTaGGGTCATTTCCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWVVCHC*GHFPWA
Trigger: AGCCCAAGGGAAATGACCTCAACAGTGACAGACAAC...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTGTTGTCTGTCACTGTTaGGGTCATTTCCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPVVCHC*GHFPWA
Trigger: AGCCCAAGGGAAATGACCTCAACAGTGACAGACAAC...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTCTCATCAAAGAAGGCTaGGGAAGCAGAGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPLIKEG*GSRGFL
Trigger: AAGGAAGCCTCTGCTTCCTCAGCCTTCTTTGATGAG...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp GCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGGTTGGCATACTGAGTaGCCCTGTAGGTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ATNANPIGEGSPETCGGCGWHTE*PCRLWQ
Trigger: CTGCCACAACCTACAGGGTCACTCAGTATGCCAACC...GCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp GAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTGGAGTTGGGACCTGGTaGGAAGGCTGGGATCCCAAT +
Preference number: 4 (lower is better)
Translates to: EDRMCWACRFQDSALMSSGVGTW*EGWDPN
Trigger: ATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCC...AGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TCCCTCACGTCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGATCGCTGGTGATGACTaGGGGGTGAAAACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SLTSMSCSKGEQQSALPQIAGDD*GVKTLG
Trigger: GCCAAGGGTTTTCACCCCTCAGTCATCACCAGCGAT...CTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGTTGTTCAAAGGGTAGCCACGACATGAGGTaGGAGTGTCCCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: SLGSAQHPSLTSMSCSKGSHDMR*ECPLTE
Trigger: CTCTGTGAGGGGACACTCTCACCTCATGTCGTGGCT...ACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTAGCTGGACACCTCGCTaGAGCTGCTACAGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: AALEENHSLIWLQFQNWASWTPR*SCYSPP
Trigger: TGGCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCT...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGGAGTTGTTCAAAGGGTaGACAGCAGTCAGCTCTACC +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWELFKG*TAVSST
Trigger: GGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTC...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GGTGAAAACCCTTGGCCTTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGAGAGTTGTTCAAAGGGTaGACAGCAGTCAGCTCTACC +
Preference number: 4 (lower is better)
Translates to: GENPWPWRWSWDLVRRLGELFKG*TAVSST
Trigger: GGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTC...TCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCAGAGTTGTTCAAAGGGTaGACAGCAGTCAGCTCTACC +
Preference number: 4 (lower is better)
Translates to: SPAPSRARRQSASPTAESELFKG*TAVSST
Trigger: GGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTC...TGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCATTTGGGAGGAATCCTTaGGACACCCAATTTGACCTA +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPFGRNP*DTQFDL
Trigger: TAGGTCAAATTGGGTGTCTCAAGGATTCCTCCCAAA...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp GCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTTCATCTCCTTGCACCTaGGCTGTCTCTGGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: AGLEPSLQHHIPGSKEKSSSPCT*AVSGGL
Trigger: AAGCCCGCCAGAGACAGCTCAGGTGCAAGGAGATGA...ACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACATTGTGGCAGAAAGCCCTCAGCCCACTGTaGGGAAGACCCCGGACAAGG +
Preference number: 4 (lower is better)
Translates to: AHPITRVKVKAFFTLWQKALSPL*GRPRTR
Trigger: CCTTGTCCGGGGTCTTCCGCACAGTGGGCTGAGGGC...TTTCTGCCACAATGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR GCA 90 bp CACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTGGAGTCAAGGGCAGAGAATGTGTTGGGCTTaGCGGTTCCAAGACAGTGCC +
Preference number: 4 (lower is better)
Translates to: HRRNGLGLRLQHRWSQGQRMCWA*RFQDSA
Trigger: GGCACTGTCTTGGAACCGGCAAGCCCAACACATTCT...CTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp GCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAGAATGTGTTGGGCTTaGCGGTTCCAAGACAGTGCC +
Preference number: 4 (lower is better)
Translates to: ALSWFGAKPTASHTWQQGRMCWA*RFQDSA
Trigger: GGCACTGTCTTGGAACCGGCAAGCCCAACACATTCT...TCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp ACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTAGAATGTGTTGGGCTTaGCGGTTCCAAGACAGTGCC +
Preference number: 4 (lower is better)
Translates to: TGSSVGEAPQSCSSRTDARMCWA*RFQDSA
Trigger: GGCACTGTCTTGGAACCGGCAAGCCCAACACATTCT...AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp ATCACGGGAAGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGAGATCCCACACAACTaGCTTGCCACTGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: ITGSRSSSEHSTNWVAMSEIPHN*LATGVS
Trigger: GCTCACCCCAGTGGCAAGGCAGTTGTGTGGGATCTC...TGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTCCCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR GCA 90 bp CAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCATCAAAGCACCAGCTaGTCTGTGTTGGTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: QVLQSHGGQSLVAFCPALHQSTS*SVLVAY
Trigger: ATAAGCTACCAACACAGAGCAGCTGGTGCTTTGATG...GAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGGGTGCTTGTGCCACTTaGTCTGGCACCTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKGACAT*SGTCSG
Trigger: ACCACTGCAGGTGCCAGAGCAAGTGGCACAAGCACC...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTGGAGTCAAGGGCAGTATCAGTGGTGCTTGTaGCACTTGCTCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: HRRNGLGLRLQHRWSQGQYQWCL*HLLWHL
Trigger: CAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATA...CTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp GTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGTATCAGTGGTGCTTGTaGCACTTGCTCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: VDHPLSTALTGWLCQDARYQWCL*HLLWHL
Trigger: CAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATA...CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCCCTCACGTCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGGGGAGGTATCAGTGGTaGTTGTGCCACTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLTSMSCSKGEQQSALPQGRYQW*LCHLLW
Trigger: CCAGAGCAAGTGGCACAAGCACCACTGATACCTCCC...CTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGGATCCCAAGGCCTCCTaGAGCTCAGCTGATCGCATC +
Preference number: 4 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRDPKAS*SSADRI
Trigger: GATGCGATCAGCTGAGCTGCAGGAGGCCTTGGGATC...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTCTGTTTGGAGGCCTGGCTaGAGAAGGCCTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: CPPVPCEFPACHRAREISVWRPG*RRPVVC
Trigger: ACAGACAACAGGCCTTCTGCAGCCAGGCCTCCAAAC...AGAAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAGTTTGGAGGCCTGGCTaGAGAAGGCCTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: CSKGEQQSALPQTLGYREVWRPG*RRPVVC
Trigger: ACAGACAACAGGCCTTCTGCAGCCAGGCCTCCAAAC...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAAGGTTAGTGCCCTGCTaGCCTCCTGTTCCATGCGAG +
Preference number: 4 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKRLVPC*PPVPCE
Trigger: CTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp ATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACACACGGAGGTTAGTGCCCTaGTGCCCTCCTGTTCCATGC +
Preference number: 4 (lower is better)
Translates to: MSVAKPVPLSSSSGYRYTRRLVP*CPPVPC
Trigger: GCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCG...TGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp AGCGAGGGTGGGACTCCCATGCAAGTAGGCTCTTGGAAAGACTACTACATTCAACGGAGGTTAGTGCCCTaGTGCCCTCCTGTTCCATGC +
Preference number: 4 (lower is better)
Translates to: SEGGTPMQVGSWKDYYIQRRLVP*CPPVPC
Trigger: GCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCG...TTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCATGGGAGTCCCACCCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp GTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGGGAACTTGCACCCTTTaGCCTCCTAATAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VDHPLSTALTGWLCQDARGTCTL*PPNSCG
Trigger: GCCACAGCTATTAGGAGGGCAAAGGGTGCAAGTTCC...CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR GCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCACCGGGTTAGGAACTTaGACCCTTTGCCCTCCTAAT +
Preference number: 4 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLTGLGT*TLCPPN
Trigger: ATTAGGAGGGCAAAGGGTGCAAGTTCCTAACCCGGT...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR GCA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAGAAGCGCCTCAAAGCTaGTCTTCAAGGACTGATGCT +
Preference number: 4 (lower is better)
Translates to: AGTQLVWSQAYSITYLAAEAPQS*SSRTDA
Trigger: AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTC...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGGAAGCGCCTCAAAGCTaGTCTTCAAGGACTGATGCT +
Preference number: 4 (lower is better)
Translates to: CKALLKASCIHTSGNLMEEAPQS*SSRTDA
Trigger: AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTC...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GAAGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCCTCCAGACGCTGGGCTaGCTCTTCCAGCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: EVDHPLSTALTGWLCQDALQTLG*LFQLPF
Trigger: AAAAGGAAGCTGGAAGAGGCAGCCCAGCGTCTGGAG...GGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCACTGCTCAAAGCTTCCTaGATCCACACATCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPLLKAS*IHTSGN
Trigger: GTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAG...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGCACCTGGGCATGCACTaGAAGGCCCTGCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRHLGMH*KALLKA
Trigger: AGCTTTGAGCAGGGCCTTGCAGTGCATGCCCAGGTG...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TTCCTGCATCCACACATCGGGCAACCTCATGGAGCCCAGCCACGACATGAGGTGAGAAGTCCCCTCTTCTaGAGGGAGGAGTTATGTAAC +
Preference number: 4 (lower is better)
Translates to: FLHPHIGQPHGAQPRHEVRSPLF*REELCN
Trigger: GTTACATAACTCCTCCCTGCAGAAGAGGGGACTTCT...CACCTCATGTCGTGGCTGGGCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GTCTGGCTTCGGAGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAAGAAACAGAATCTGTTaGAGAAGTCCCCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VWLRRLVPCCPPVPCEFPRNRIC*RSPLFC
Trigger: GCAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCT...TGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCTCCGAAGCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCCCAGCAAAGGGGTCCCACGGTCCCTGAAATACTACAGGGCCCATCCAATAACGGGGAGAAGATATCCTaGCCCAGGTCCTTACAGAGT +
Preference number: 4 (lower is better)
Translates to: SQQRGPTVPEILQGPSNNGEKIS*PRSLQS
Trigger: ACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCC...GTTATTGGATGGGCCCTGTAGTATTTCAGGGACCGTGGGACCCCTTTGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp CGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGGGGGAGAAGATATCCTaGCCCAGGTCCTTACAGAGT +
Preference number: 4 (lower is better)
Translates to: RQSFLSWFCSAPIPHVHEGEKIS*PRSLQS
Trigger: ACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCC...CTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCATTCCTCTCTTGGTTCTaGTCAGCACCCATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPFLSWF*SAPIPH
Trigger: GTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAA...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp AGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGAGGGGGAAAAGACACCTaGATCGCCATCCTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: RVNSSQLYPRPWATEKYGGGKDT*IAILKW
Trigger: CCACTTTAGGATGGCGATGCAGGTGTCTTTTCCCCC...TCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGCCATGCCTGGACAGCTaGCCGCTCAAGTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKPCLDS*PLKFLQ
Trigger: CTGAAGGAACTTGAGCGGCCAGCTGTCCAGGCATGG...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGCGAGGGTGGGACTCCCATGCAAGTAGGCTCTTGGAAAGACTACTACATTCAAAGGGTATTGGCTGGCTaGGCTCCATGCCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: SEGGTPMQVGSWKDYYIQRVLAG*APCLDS
Trigger: GCTGTCCAGGCATGGAGCCCAGCCAGCCAATACCCT...TTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCATGGGAGTCCCACCCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp ATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACACAAGGGTATTGGCTGGCTaGGCTCCATGCCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: MSVAKPVPLSSSSGYRYTRVLAG*APCLDS
Trigger: GCTGTCCAGGCATGGAGCCCAGCCAGCCAATACCCT...TGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTGGAGGCTGCTGTGACGGGCAGATGTTCCTGTaGCCAGATACAAAGGGTATT +
Preference number: 4 (lower is better)
Translates to: WACRFQDSALMSSGGCCDGQMFL*PDTKGI
Trigger: AATACCCTTTGTATCTGGCCACAGGAACATCTGCCC...GTCACAGCAGCCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000480905.1
CDS-3UTR CCA 90 bp CGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGGAGGAATCTAGCTGTTaGGCAGATGTTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: RQSFLSWFCSAPIPHVHEEESSC*ADVPVA
Trigger: GGCCACAGGAACATCTGCCCAACAGCTAGATTCCTC...CTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TGTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGGATCCCAGGGTCATTaGCACATTCAAGTTATTCAG +
Preference number: 4 (lower is better)
Translates to: CGSPAPSRARRQSASPTAGSQGH*HIQVIQ
Trigger: CTGAATAACTTGAATGTGCCAATGACCCTGGGATCC...AGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAGAAGACAGAATGTGTTaGGCTTGCCGGTTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: AGTQLVWSQAYSITYLAAEDRMC*ACRFQD
Trigger: GTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGGAAGACAGAATGTGTTaGGCTTGCCGGTTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: CKALLKASCIHTSGNLMEEDRMC*ACRFQD
Trigger: GTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGCAACTGCCTTGCCACTaGGGTGAGCAGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: RQSFLSWFCSAPIPHVHEQLPCH*GEQKTE
Trigger: TTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTG...CTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGAGAGCACAGCACTAACTaGGTGGCTATGTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: RVNSSQLYPRPWATEKYGEHSTN*VAMSGC
Trigger: GCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTC...TCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTGTGTGTTTGGAGGCCTaGCTGCAGAAGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLVCLEA*LQKACC
Trigger: ACAACAGGCCTTCTGCAGCCAGGCCTCCAAACACAC...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAATCTGTACCCCCAGCCTaGGCCAGGATAATGGCATCA +
Preference number: 4 (lower is better)
Translates to: HSAGLEPSLQHHIPGSKESVPPA*ARIMAS
Trigger: TGATGCCATTATCCTGGCCCAGGCTGGGGGTACAGA...TTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAACACATAACAGAGTCTaGCTTCGGAGGTTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: AGTQLVWSQAYSITYLAATHNRV*LRRLVP
Trigger: GGGCACTAACCTCCGAAGCCAGACTCTGTTATGTGT...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGCTGAGCACAGTCCCTaGGTAGAAAGCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: ATNANPIGEGSPETCGGCAEHSP*VESSWQ
Trigger: CTGCCATGAGCTTTCTACCCAGGGACTGTGCTCAGC...GCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCAGGGGTGAAAACCCTTaGCCTTGGAGATGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGRGENP*PWRWSW
Trigger: CCAACTCCATCTCCAAGGCCAAGGGTTTTCACCCCT...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTAAGGCAAAGGCTGGATaGCCTGGGGCCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ILPQVLTECSIRESEELIKAKAG*PGAQVP
Trigger: GGGCACCTGGGCCCCAGGCCATCCAGCCTTTGCCTT...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGTGCCTGGGCATGCCATaGGTAGAGGGGAACCAGGAA +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKCLGMP*VEGNQE
Trigger: TTCCTGGTTCCCCTCTACCCATGGCATGCCCAGGCA...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR CCA 90 bp GAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTAGGCAGCTTGTTCCTCTaGAGGTTTCCCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: EYVSSKASASLQFFRLQVGSLFL*RFPLGA
Trigger: AGCCCCCAGGGGAAACCTCCAGAGGAACAAGCTGCC...TACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTGGGCATAAATGTCTCTaGCAGCTTGTTCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPAGHKCL*QLVPLE
Trigger: CTCCAGAGGAACAAGCTGCCAGAGACATTTATGCCC...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTGGTGAGGCTCATAACTaGAGCAGTAATTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPGEAHN*SSNWCW
Trigger: CCAGCACCAATTACTGCTCCAGTTATGAGCCTCACC...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp AGTGGCCTCCTAGCAAGAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATTCTCCTGGAACTCCTaGGGGAGCATGACTCACACT +
Preference number: 4 (lower is better)
Translates to: SGLLAREAAWFRPAAYERFSWNS*GSMTHT
Trigger: AGTGTGAGTCATGCTCCCCCAGGAGTTCCAGGAGAA...TCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGCTAGGAGGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCGACAGGGAGCAGCGTTaGAGAAGCGCCTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: RRQNVLGLPVPRQCLDVLDREQR*RSASKL
Trigger: CAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTC...GAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGCCACCTTCTTCTAAGCAGGCACTCAGCTaGTTTGGAGCCAAGCCTACA +
Preference number: 4 (lower is better)
Translates to: EDSHLAPRHSSTMWPPSSKQALS*FGAKPT
Trigger: TGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGCTT...AGAAGAAGGTGGCCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
3UTR CAA 72 bp GGCACCACTGCACATCAAAGCACCAGCTGCTCTGTGTaGGTAGCTTATATACCACCTCACTGCTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GTTAHQSTSCSV*VAYIPPHCSPG
Trigger: ACCTGGGGAGCAGTGAGGTGGTATATAAGCTACCAACACAGAGCAGCTGGTGCTTTGATGTGCAGTGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
3UTR CAA 72 bp CTCCTACCCATCACAGAGTACAAACTGATCCAGCCGTaGAAGGAGGCAGCAGAGAACACTGAAGGGTCCCGA +
Preference number: 4 (lower is better)
Translates to: LLPITEYKLIQP*KEAAENTEGSR
Trigger: TCGGGACCCTTCAGTGTTCTCTGCTGCCTCCTTCAACGGCTGGATCAGTTTGTACTCTGTGATGGGTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAGCCCAGAGAAGGGTCCCTaGAATCAACCTCAAATATTT +
Preference number: 4 (lower is better)
Translates to: CRAMGDKAWWHFAQHSTSPEKGP*NQPQIF
Trigger: AAATATTTGAGGTTGATTTCAGGGACCCTTCTCTGG...GCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAATCCAAGACAGTGCCTTaGTGTCCTCTGGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKSKTVP*CPLEAA
Trigger: AGCAGCCTCCAGAGGACATCAAGGCACTGTCTTGGA...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGCGCAAGTCCCACAGCTaGATCACGGGAAGTCGATCA +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKRKSHS*ITGSRS
Trigger: TGATCGACTTCCCGTGATTCAGCTGTGGGACTTGCG...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GAGCATGACTCACACTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTGATTCTGTGGTGACTTaGCTGATGAAGACTAGGCGG +
Preference number: 4 (lower is better)
Translates to: EHDSHWRQGAVREESLVADSVVT*LMKTRR
Trigger: CCGCCTAGTCTTCATCAGTCAAGTCACCACAGAATC...AGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGTGGCCTCCTAGCAAGAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGAGATTCTGTGGTGACTTaGCTGATGAAGACTAGGCGG +
Preference number: 4 (lower is better)
Translates to: SGLLAREAAWFRPAAYERDSVVT*LMKTRR
Trigger: CCGCCTAGTCTTCATCAGTCAAGTCACCACAGAATC...TCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGCTAGGAGGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCGATTCTGTGGTGACTTaGCTGATGAAGACTAGGCGG +
Preference number: 4 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGDSVVT*LMKTRR
Trigger: CCGCCTAGTCTTCATCAGTCAAGTCACCACAGAATC...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGTCATTTCCCTTGGGCTaGGGACTCTCACCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: LGYREIRTWKYQVRGREKSFPLG*GLSPSP
Trigger: GGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAAATGA...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCAGCCTGGCTGTTGTCTGTCACTGTTaGGGTCATTTCCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: QDLAVLSTSEQQLSISLAVVCHC*GHFPWA
Trigger: AGCCCAAGGGAAATGACCTCAACAGTGACAGACAAC...AGCCAGGCTGATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGCCCGCCATCAATATCTTTTGTaGTGGGGATCTCCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SLQDRHEAGHLAEAATARHQYLL*WGSPKE
Trigger: CTCCTTGGGAGATCCCCATCACAAAAGATATTGATG...GCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGGTTGGCATACTGAGTaGCCCTGTAGGTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LVWSQAYSITYLAARKRVGWHTE*PCRLWQ
Trigger: CTGCCACAACCTACAGGGTCACTCAGTATGCCAACC...GACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTGGAGTTGGGACCTGGTaGGAAGGCTGGGATCCCAAT +
Preference number: 4 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPGVGTW*EGWDPN
Trigger: ATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCC...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGGTGATGACTGAGGGGTaGAAACCCTTGGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRVMTEG*KPLALE
Trigger: CTCCAAGGCCAAGGGTTTTCACCCCTCAGTCATCAC...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGGGAAAAATCGCTGGTGATGACTaGGGGGTGAAAACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GAKPTASHTWQQGKESGKIAGDD*GVKTLG
Trigger: GCCAAGGGTTTTCACCCCTCAGTCATCACCAGCGAT...TTTTCCCGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGCGAGGGTGGGACTCCCATGCAAGTAGGCTCTTGGAAAGACTACTACATTCAAAGCCACGACATGAGGTaGGAGTGTCCCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: SEGGTPMQVGSWKDYYIQSHDMR*ECPLTE
Trigger: CTCTGTGAGGGGACACTCTCACCTCATGTCGTGGCT...TTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCATGGGAGTCCCACCCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp AGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCCCCTGCCTCCAGGCCTaGGAGTGTCTTGGACAGATC +
Preference number: 4 (lower is better)
Translates to: SSAGRESFLNMAPIPELGPCLQA*ECLGQI
Trigger: GATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGG...GCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp TCCCTGAAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCGGGTCCCACGGTCCCTaGAATACTACAGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: SLKYYRAHPITRVKVKAFGSHGP*NTTGPI
Trigger: GATGGGCCCTGTAGTATTTCAGGGACCGTGGGACCC...GAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTTCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTGGGTCCCACGGTCCCTaGAATACTACAGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: AALEENHSLIWLQFQNWAGSHGP*NTTGPI
Trigger: GATGGGCCCTGTAGTATTTCAGGGACCGTGGGACCC...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp GAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTAGAGGCTGGCCTTTGCTaGAGGAAGAGGAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: EYVSSKASASLQFFRLQVEAGLC*RKRRSG
Trigger: CCCAGATCTCCTCTTCCTTCAGCAAAGGCCAGCCTC...TACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp AGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGTCTTTCCAGGAATCTTaGGGTCCAGGCCTTACCCCA +
Preference number: 4 (lower is better)
Translates to: SRSSSEHSTNWVAMSGCQSFQES*GPGLTP
Trigger: TGGGGTAAGGCCTGGACCTCAAGATTCCTGGAAAGA...CTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482456.6
CDS-3UTR TCA 90 bp CTCTGGCGGGCTTCAGGAACTGCCACAGCATCTTTTCACTTTGCAGTAAAGCTTTCATCTCCTTGCACCTaGGCTGTCTCTGGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: LWRASGTATASFHFAVKLSSPCT*AVSGGL
Trigger: AAGCCCGCCAGAGACAGCTCAGGTGCAAGGAGATGA...AAGCTTTACTGCAAAGTGAAAAGATGCTGTGGCAGTTCCTGAAGCCCGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCCTGAAGCCAGGAGGTTaGCCTGGAAAGGATTCAAGT +
Preference number: 4 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGLKPGG*PGKDSS
Trigger: ACTTGAATCCTTTCCAGGGCAACCTCCTGGCTTCAG...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR GCA 90 bp ATCCCTGGGGGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGCCGGTTCCAAGACAGTaGCTTGATGTCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IPGGEDILPQVLTECSIRPVPRQ*LDVLWR
Trigger: CCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGG...CCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCCCAGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTCCGGTTCCAAGACAGTaGCTTGATGTCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EDRMCWACRFQDSALMSSPVPRQ*LDVLWR
Trigger: CCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGG...AGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR GCA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTTATATACCACCTCACTaGTCCCCAGGTTCCGGCACA +
Preference number: 4 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLYIPPH*SPGSGT
Trigger: TGTGCCGGAACCTGGGGAGCAGTGAGGTGGTATATA...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTCTTATATACCACCTCACTaGTCCCCAGGTTCCGGCACA +
Preference number: 4 (lower is better)
Translates to: CPPVPCEFPACHRAREISYIPPH*SPGSGT
Trigger: TGTGCCGGAACCTGGGGAGCAGTGAGGTGGTATATA...AGAAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGAGGTTAGTGCCCTGCTaGCCTCCTGTTCCATGCGAG +
Preference number: 4 (lower is better)
Translates to: LGYREIRTWKYQVRGREKRLVPC*PPVPCE
Trigger: CTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAAGCCTGGTGGCATTTTaGCCAGCACTCCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: GEDILPQVLTECSIRESESLVAF*PALHQP
Trigger: CGGCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCT...TTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGGGCCTGGGGCCCAGGTaGCCTGTAGTCACTTATATT +
Preference number: 4 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRGLGPR*PVVTYI
Trigger: AATATAAGTGACTACAGGGCACCTGGGCCCCAGGCC...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCACCGGGTTAGGAACTTaGACCCTTTGCCCTCCTAAT +
Preference number: 4 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGTGLGT*TLCPPN
Trigger: ATTAGGAGGGCAAAGGGTGCAAGTTCCTAACCCGGT...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR GCA 90 bp GAGGACAGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGAAGCGCCTCAAAGCTaGTCTTCAAGGACTGATGCT +
Preference number: 4 (lower is better)
Translates to: EDSLQDRHEAGHLAEAATEAPQS*SSRTDA
Trigger: AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTC...TGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCTGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTCTGCTCAAAGCTTCCTaGATCCACACATCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLLLKAS*IHTSGN
Trigger: GTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAG...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAACTGCTCAAAGCTTCCTaGATCCACACATCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: CSKGEQQSALPQTLGYRELLKAS*IHTSGN
Trigger: GTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAG...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAATATCTAGAAGTCCCCTCTTCTaGAGGGAGGAGTTATGTAAC +
Preference number: 4 (lower is better)
Translates to: AGPSSPSRRAWLRSPSISRSPLF*REELCN
Trigger: GTTACATAACTCCTCCCTGCAGAAGAGGGGACTTCT...AGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GGTGAAAACCCTTGGCCTTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGAAGAAGTCCCCTCTTCTaGAGGGAGGAGTTATGTAAC +
Preference number: 4 (lower is better)
Translates to: GENPWPWRWSWDLVRRLGRSPLF*REELCN
Trigger: GTTACATAACTCCTCCCTGCAGAAGAGGGGACTTCT...TCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGAAGTCCCCTCTTCTaGAGGGAGGAGTTATGTAAC +
Preference number: 4 (lower is better)
Translates to: AGTQLVWSQAYSITYLAARSPLF*REELCN
Trigger: GTTACATAACTCCTCCCTGCAGAAGAGGGGACTTCT...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCAGAAACAGAATCTGTTaGAGAAGTCCCCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ACTARPCSKLPASTHRATRNRIC*RSPLFC
Trigger: GCAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCT...GGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAATTCCTCTCTTGGTTCTaGTCAGCACCCATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: CSKGEQQSALPQTLGYREFLSWF*SAPIPH
Trigger: GTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAA...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAAGCACTAGGGCAAAGGTaGAGCCCTCCCAAACCCCGG +
Preference number: 4 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKALGQR*SPPKPR
Trigger: CCGGGGTTTGGGAGGGCTGCACCTTTGCCCTAGTGC...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCGGTCTATCCTGTAGGTaGCAGAAAACTGACATGGCC +
Preference number: 4 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGGLSCR*QKTDMA
Trigger: GGCCATGTCAGTTTTCTGCCACCTACAGGATAGACC...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCAGGGCAGATGTTCCTGTaGCCAGATACAAAGGGTATT +
Preference number: 4 (lower is better)
Translates to: SPAPSRARRQSASPTAESGQMFL*PDTKGI
Trigger: AATACCCTTTGTATCTGGCCACAGGAACATCTGCCC...TGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp CTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCACGGATCCCAGGGTCATTaGCACATTCAAGTTATTCAG +
Preference number: 4 (lower is better)
Translates to: LQHLQGRGGKAQVPQLNHGSQGH*HIQVIQ
Trigger: CTGAATAACTTGAATGTGCCAATGACCCTGGGATCC...GTGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp CCACACAACTGCCTTGCCACTGGGGTGAGCAGAAGACAGAATGTGTTGGGCTTGTTCCGGCACAAGATCTaGCTGTCCTTAGCACTAGTG +
Preference number: 4 (lower is better)
Translates to: PHNCLATGVSRRQNVLGLFRHKI*LSLALV
Trigger: CACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAA...CAAGCCCAACACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CCA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGCCTGTCTCATATGCTaGACTTCCCAGCTCCTACCC +
Preference number: 4 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKACLIC*TSQLLP
Trigger: GGGTAGGAGCTGGGAAGTCCAGCATATGAGACAGGC...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp ATCCCTGGGGGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGCCTGTCTCATATGCTaGACTTCCCAGCTCCTACCC +
Preference number: 4 (lower is better)
Translates to: IPGGEDILPQVLTECSIRACLIC*TSQLLP
Trigger: GGGTAGGAGCTGGGAAGTCCAGCATATGAGACAGGC...CCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCCCAGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTGCCTGTCTCATATGCTaGACTTCCCAGCTCCTACCC +
Preference number: 4 (lower is better)
Translates to: EDRMCWACRFQDSALMSSACLIC*TSQLLP
Trigger: GGGTAGGAGCTGGGAAGTCCAGCATATGAGACAGGC...AGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGTTGTGCCACTTGCTCTaGCACCTGCAGTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LGYREIRTWKYQVRGREKLCHLL*HLQWWE
Trigger: CTCCCACCACTGCAGGTGCCAGAGCAAGTGGCACAA...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGCAGGGGAGGTATCAGTaGTGCTTGTGCCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRQGRYQ*CLCHLL
Trigger: GAGCAAGTGGCACAAGCACCACTGATACCTCCCCTG...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCCAGGGGAGGTATCAGTaGTGCTTGTGCCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: LVWSQAYSITYLAARKRVQGRYQ*CLCHLL
Trigger: GAGCAAGTGGCACAAGCACCACTGATACCTCCCCTG...GACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATGCAGGGGAGGTATCAGTaGTGCTTGTGCCACTTGCTC +
Preference number: 4 (lower is better)
Translates to: LEMELGPGEKAGIPICKMQGRYQ*CLCHLL
Trigger: GAGCAAGTGGCACAAGCACCACTGATACCTCCCCTG...CATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCACTCTTCAACCATGTaGCCACCTTCTTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLHSSTM*PPSSEA
Trigger: AGCTTCAGAAGAAGGTGGCCACATGGTTGAAGAGTG...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTGTGTGTTTGGAGGCCTaGCTGCAGAAGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: AGLEPSLQHHIPGSKEKSVCLEA*LQKACC
Trigger: ACAACAGGCCTTCTGCAGCCAGGCCTCCAAACACAC...ACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCAGAGGCTTCCTTTGTaGTGTGTTTGGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: AGLEPSLQHHIPGSKEKSQRLPL*CVWRPG
Trigger: GCCAGGCCTCCAAACACACCACAAAGGAAGCCTCTG...ACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACACACCACAGAGGCTTCCTTTGTaGTGTGTTTGGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SVAKPVPLSSSSGYRYTPQRLPL*CVWRPG
Trigger: GCCAGGCCTCCAAACACACCACAAAGGAAGCCTCTG...TGGTGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAGGACAGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACACCAAGCAGGAGAGCCTaGCTTAGGAGTCCATCAATA +
Preference number: 4 (lower is better)
Translates to: EDSLQDRHEAGHLAEAATPSRRA*LRSPSI
Trigger: TATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGG...TGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCTGTCCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCTCTGTACCCCCAGCCTaGGCCAGGATAATGGCATCA +
Preference number: 4 (lower is better)
Translates to: APVSQPKTASSKRQFIPFSVPPA*ARIMAS
Trigger: TGATGCCATTATCCTGGCCCAGGCTGGGGGTACAGA...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTTTTGGTTTTCTTCTTaGCCAAGTAGCGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ACTARPCSKLPASTHRATFWFSS*PSSAPV
Trigger: CACAGGAGCGCTACTTGGCCAAGAAGAAAACCAAAA...GGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGGCTGAGCACAGTCCCTaGGTAGAAAGCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKAEHSP*VESSWQ
Trigger: CTGCCATGAGCTTTCTACCCAGGGACTGTGCTCAGC...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGGATGTCTCTTTAGAGTaGAGGGTAGCTCCCACAACA +
Preference number: 4 (lower is better)
Translates to: CKALLKASCIHTSGNLMEDVSLE*RVAPTT
Trigger: TGTTGTGGGAGCTACCCTCCACTCTAAAGAGACATC...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCCCTTGGAGATGGAGTTaGGACCTGGTGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LVWSQAYSITYLAARKRVPWRWS*DLVRRL
Trigger: CAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGG...GACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp ATTGCACCATTAAGTACATCACTGCATCAAAGACAGTGCCACAAATGCAAATCCGGAGGGGCTGGGGTGTaGGAGACCATGCGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: IAPLSTSLHQRQCHKCKSGGAGV*ETMRPG
Trigger: TCCCGGCCGCATGGTCTCCCACACCCCAGCCCCTCC...GGATTTGCATTTGTGGCACTGTCTTTGATGCAGTGATGTACTTAATGGTGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR CCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTACAGCATCACATACCTaGCAGCAAGGAAAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPATASHT*QQGKES
Trigger: CGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGT...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp AGGTTAGTGCCCTGCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAACAGCATCACATACCTaGCAGCAAGGAAAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: RLVPCCPPVPCEFPACHRTASHT*QQGKES
Trigger: CGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGT...TCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TGCCTTGCCACTGGGGTGAGCAGAAGACAGAATGTGTTGGGCTTGCCGGTTCCAACAGCATCACATACCTaGCAGCAAGGAAAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: CLATGVSRRQNVLGLPVPTASHT*QQGKES
Trigger: CGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGT...TGGAACCGGCAAGCCCAACACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCGGCACTCAGCTGGTTTaGAGCCAAGCCTACAGCATC +
Preference number: 4 (lower is better)
Translates to: SATNANPIGEGSPETCGGGTQLV*SQAYSI
Trigger: GATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCC...GCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp TCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGTTGTTCAAAGGGTGGCACTCAGCTGGTTTaGAGCCAAGCCTACAGCATC +
Preference number: 4 (lower is better)
Translates to: SLGSAQHPSLTSMSCSKGGTQLV*SQAYSI
Trigger: GATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCC...ACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAGGCCTGAGAGTGTCTTaGACAGATCCTAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HSAGLEPSLQHHIPGSKEGLRVS*TDPRRP
Trigger: TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCC...TTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTAGGCTCCAACATAGGTaGAGTCAAGGGCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: AGLEPSLQHHIPGSKEKSRLQHR*SQGQFP
Trigger: GGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT...ACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR CAA 72 bp CTTCCCTCCAGCATTCTCTACCAAGCCCTTCAAACCTaGTCAGCCTGTCTCATATGCTGGACTTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPSSILYQALQT*SACLICWTSQL
Trigger: GAGCTGGGAAGTCCAGCATATGAGACAGGCTGACAAGGTTTGAAGGGCTTGGTAGAGAATGCTGGAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR TCA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGATGTGCCATTTGTGCTaGAGGAGGAATCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: EQQSALPQTLGYREIRTWMCHLC*RRNLAV
Trigger: AACAGCTAGATTCCTCCTTCAGCACAAATGGCACAT...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCACCAGAGAAGGGTCCCTaGAATCAACCTCAAATATTT +
Preference number: 4 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPPEKGP*NQPQIF
Trigger: AAATATTTGAGGTTGATTTCAGGGACCCTTCTCTGG...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGCGCAAGTCCCACAGCTaGATCACGGGAAGTCGATCA +
Preference number: 4 (lower is better)
Translates to: LGYREIRTWKYQVRGREKRKSHS*ITGSRS
Trigger: TGATCGACTTCCCGTGATTCAGCTGTGGGACTTGCG...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTGTGGCCACCTTCTTCTaGAGCTCATCTTTACTGTAT +
Preference number: 4 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPVATFF*SSSLLY
Trigger: ATACAGTAAAGATGAGCTTCAGAAGAAGGTGGCCAC...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGGTGGCCACCTTCTTCTaGAGCTCATCTTTACTGTAT +
Preference number: 4 (lower is better)
Translates to: CKALLKASCIHTSGNLMEVATFF*SSSLLY
Trigger: ATACAGTAAAGATGAGCTTCAGAAGAAGGTGGCCAC...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAATATCTGTGGCCACCTTCTTCTaGAGCTCATCTTTACTGTAT +
Preference number: 4 (lower is better)
Translates to: AGPSSPSRRAWLRSPSISVATFF*SSSLLY
Trigger: ATACAGTAAAGATGAGCTTCAGAAGAAGGTGGCCAC...AGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAATCATTTCCCTTGGGCTaGGGACTCTCACCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: GEDILPQVLTECSIRESESFPLG*GLSPSP
Trigger: GGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAAATGA...TTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TCCCTCACGTCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGGTTGTCTGTCACTGTTaGGGTCATTTCCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SLTSMSCSKGEQQSALPQVVCHC*GHFPWA
Trigger: AGCCCAAGGGAAATGACCTCAACAGTGACAGACAAC...CTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCCAAGGAGTCATGTTCTaGGGGACCAGCTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: ATNANPIGEGSPETCGGCQGVMF*GTSSSK
Trigger: CTTTGATGAGCTGGTCCCTCAGAACATGACTCCTTG...GCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp TCCCTCACGTCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGCAAGGAGTCATGTTCTaGGGGACCAGCTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: SLTSMSCSKGEQQSALPQQGVMF*GTSSSK
Trigger: CTTTGATGAGCTGGTCCCTCAGAACATGACTCCTTG...CTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCATCCCTGGGCTCACCCCATaGGGACCCCGCAGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GRESFLNMAPIPELGFIIPGLTP*GPRSCS
Trigger: GGAGCAACTGCGGGGTCCTCATGGGGTGAGCCCAGG...GATGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp ATTGCACCATTAAGTACATCACTGCATCAAAGACAGTGCCACAAATGCAAATCCCCTGGGCTCACCCCATaGGGACCCCGCAGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: IAPLSTSLHQRQCHKCKSPGLTP*GPRSCS
Trigger: GGAGCAACTGCGGGGTCCTCATGGGGTGAGCCCAGG...GGATTTGCATTTGTGGCACTGTCTTTGATGCAGTGATGTACTTAATGGTGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTGGTTGGCATACTGAGTaGCCCTGTAGGTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPGWHTE*PCRLWQ
Trigger: CTGCCACAACCTACAGGGTCACTCAGTATGCCAACC...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCATCCCAATCTGTAAGATaGTGTCTCTTTAGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPSQSVR*CLFRVE
Trigger: CTCCACTCTAAAGAGACATCATCTTACAGATTGGGA...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGATCGCTGGTGATGACTaGGGGGTGAAAACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LGYREIRTWKYQVRGREKIAGDD*GVKTLG
Trigger: GCCAAGGGTTTTCACCCCTCAGTCATCACCAGCGAT...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTAGCTGGACACCTCGCTaGAGCTGCTACAGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SAGRESFLNMAPIPELGFSWTPR*SCYSPP
Trigger: TGGCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCT...AAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCAACAAAAGACCCACATaGTGGGTCACAGCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGNKRPT*WVTAEV
Trigger: TACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTT...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAAACAAAAGACCCACATaGTGGGTCACAGCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPNKRPT*WVTAEV
Trigger: TACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTT...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCTTTTGAGACACCCAATTTaGCCTAGAAAGGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: EKRLKAALQGLMLWGQLLLRHPI*PRKVRL
Trigger: GAGTCTGACCTTTCTAGGTCAAATTGGGTGTCTCAA...AAGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp AATTTCTCTGTGCCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCGAGGCTGGCCTTTGCTaGAGGAAGAGGAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: NFSVPEYVSSKASASLQFEAGLC*RKRRSG
Trigger: CCCAGATCTCCTCTTCCTTCAGCAAAGGCCAGCCTC...GAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp GCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCCTGAAGCCAGGAGGTTaGCCTGGAAAGGATTCAAGT +
Preference number: 4 (lower is better)
Translates to: ATNANPIGEGSPETCGGCLKPGG*PGKDSS
Trigger: ACTTGAATCCTTTCCAGGGCAACCTCCTGGCTTCAG...GCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000462434.5
CDS-3UTR GCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTCCGGTTCCAAGACAGTaGCTTGATGTCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPPVPRQ*LDVLWR
Trigger: CCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGG...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp AATTTCTCTGTGCCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCGAGATCCCACACAACTaGCTTGCCACTGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: NFSVPEYVSSKASASLQFEIPHN*LATGVS
Trigger: GCTCACCCCAGTGGCAAGGCAGTTGTGTGGGATCTC...GAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGTATATACCACCTCACTaGTCCCCAGGTTCCGGCACA +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKYIPPH*SPGSGT
Trigger: TGTGCCGGAACCTGGGGAGCAGTGAGGTGGTATATA...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCTATATACCACCTCACTaGTCCCCAGGTTCCGGCACA +
Preference number: 4 (lower is better)
Translates to: APVSQPKTASSKRQFIPFYIPPH*SPGSGT
Trigger: TGTGCCGGAACCTGGGGAGCAGTGAGGTGGTATATA...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GGTGAAAACCCTTGGCCTTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGACATCAAAGCACCAGCTaGTCTGTGTTGGTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: GENPWPWRWSWDLVRRLGHQSTS*SVLVAY
Trigger: ATAAGCTACCAACACAGAGCAGCTGGTGCTTTGATG...TCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp AATTTCTCTGTGCCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTCCCGAGGGCACCACTaGACATCAAAGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: NFSVPEYVSSKASASLQFSRGHH*TSKHQL
Trigger: CAGCTGGTGCTTTGATGTGCAGTGGTGCCCTCGGGA...GAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCATCCCGAGGGCACCACTaGACATCAAAGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPSRGHH*TSKHQL
Trigger: CAGCTGGTGCTTTGATGTGCAGTGGTGCCCTCGGGA...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp TCCCTGAAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCGGTGCTTGTGCCACTTaGTCTGGCACCTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SLKYYRAHPITRVKVKAFGACAT*SGTCSG
Trigger: ACCACTGCAGGTGCCAGAGCAAGTGGCACAAGCACC...GAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTTCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGTATCAGTGGTGCTTGTaGCACTTGCTCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKYQWCL*HLLWHL
Trigger: CAGGTGCCAGAGCAAGTGGCACAAGCACCACTGATA...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp ATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACACAGGGAGGTATCAGTGGTaGTTGTGCCACTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: MSVAKPVPLSSSSGYRYTGRYQW*LCHLLW
Trigger: CCAGAGCAAGTGGCACAAGCACCACTGATACCTCCC...TGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGCATCAAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGGATCCCAAGGCCTCCTaGAGCTCAGCTGATCGCATC +
Preference number: 4 (lower is better)
Translates to: CIKDSATNANPIGEGSPEDPKAS*SSADRI
Trigger: GATGCGATCAGCTGAGCTGCAGGAGGCCTTGGGATC...CTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTTGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTTTCATTCTGGAGTCTTaGTCTAAGGTCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPFILES*SKVTFR
Trigger: CCTGAAGGTGACCTTAGAGCAAGACTCCAGAATGAA...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000469546.6
CDS-3UTR GCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGTTCATTCTGGAGTCTTaGTCTAAGGTCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: CKALLKASCIHTSGNLMEFILES*SKVTFR
Trigger: CCTGAAGGTGACCTTAGAGCAAGACTCCAGAATGAA...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469546.6
CDS-3UTR GCA 90 bp CATCAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCATCCTTCCAATTCTTTTaGACAACACAGGCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: HQPGSMTLTRSPCCGSPASFQFF*TTQARS
Trigger: GCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGA...TGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTCGGGAAATTTCTCTGTaGCTGAGTATGTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPREISL*LSMSVA
Trigger: TGCTACTGACATACTCAGGCACAGAGAAATTTCCCG...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp GAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCTTCGGGAAATTTCTCTGTaGCTGAGTATGTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: EKRLKAALQGLMLWGQLLREISL*LSMSVA
Trigger: TGCTACTGACATACTCAGGCACAGAGAAATTTCCCG...AAGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGCGGGAAATTTCTCTGTaGCTGAGTATGTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: FPWAEDSHLAPRHSSTMWREISL*LSMSVA
Trigger: TGCTACTGACATACTCAGGCACAGAGAAATTTCCCG...CCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp AGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCAGGTTAGTGCCCTGCTaGCCTCCTGTTCCATGCGAG +
Preference number: 4 (lower is better)
Translates to: SSAGRESFLNMAPIPELGRLVPC*PPVPCE
Trigger: CTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT...GCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGGGTGAGGAGTCAAGATaGCAGTGGTTGGGAGGACAC +
Preference number: 4 (lower is better)
Translates to: LGYREIRTWKYQVRGREKGEESR*QWLGGH
Trigger: GTGTCCTCCCAACCACTGGCATCTTGACTCCTCACC...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR GCA 90 bp ATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACACACTCCAGACGCTGGGCTaGCTCTTCCAGCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: MSVAKPVPLSSSSGYRYTLQTLG*LFQLPF
Trigger: AAAAGGAAGCTGGAAGAGGCAGCCCAGCGTCTGGAG...TGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGAGAAACAGAATCTGTTaGAGAAGTCCCCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FPWAEDSHLAPRHSSTMWRNRIC*RSPLFC
Trigger: GCAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCT...CCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp AAGGAGTCATGTTCTGAGGGACCAGCTCATCAAAGAAGGCTGAGGAAGCAGAGGGAAGAACTGATTCTATaGCCTGCCTCCAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KESCSEGPAHQRRLRKQREELIL*PASRPE
Trigger: CTCAGGCCTGGAGGCAGGGCATAGAATCAGTTCTTC...CCTCTGCTTCCTCAGCCTTCTTTGATGAGCTGGTCCCTCAGAACATGACTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTAGACAGTGCCACAAATaGAAATCCAATCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPARQCHK*KSNRRR
Trigger: CCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCT...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp GAGCATGACTCACACTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTTTCATTCTGGAGTCTTaGTCTAAGGTCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: EHDSHWRQGAVREESLVAFILES*SKVTCL
Trigger: CAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAA...AGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGGGGCAGATGTTCCTGTaGCCAGATACAAAGGGTATT +
Preference number: 4 (lower is better)
Translates to: RQSFLSWFCSAPIPHVHEGQMFL*PDTKGI
Trigger: AATACCCTTTGTATCTGGCCACAGGAACATCTGCCC...CTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACAGCCCGCCCCGAAGACAGGATGTaGGTCACATTGTATAGAATA +
Preference number: 4 (lower is better)
Translates to: SLQDRHEAGHLAEAATARPEDRM*VTLYRI
Trigger: TATTCTATACAATGTGACCCACATCCTGTCTTCGGG...GCGGGCTGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CCA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGGCCAGGAGGTTGCCCTaGAAAGGATTCAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: LGYREIRTWKYQVRGREKARRLP*KGFKSR
Trigger: CCTCGACTTGAATCCTTTCCAGGGCAACCTCCTGGC...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CCA 90 bp GAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCCTTGGATCCCAGGGTCATTaGCACATTCAAGTTATTCAG +
Preference number: 4 (lower is better)
Translates to: EKRLKAALQGLMLWGQLLGSQGH*HIQVIQ
Trigger: CTGAATAACTTGAATGTGCCAATGACCCTGGGATCC...AAGGAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCACAGCACTAACTGGGTaGCTATGTCAGGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: SATNANPIGEGSPETCGGTALTG*LCQDAR
Trigger: CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGT...GCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAACAGCACTAACTGGGTaGCTATGTCAGGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKTALTG*LCQDAR
Trigger: CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGT...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGGAGCACAGCACTAACTaGGTGGCTATGTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKEHSTN*VAMSGC
Trigger: GCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTC...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGTTGTTCAAAGGGTGAGCACAGCACTAACTaGGTGGCTATGTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: SLGSAQHPSLTSMSCSKGEHSTN*VAMSGC
Trigger: GCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTC...ACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCCCTCACGTCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGTTCCGGCACAAGATCTaGCTGTCCTTAGCACTAGTG +
Preference number: 4 (lower is better)
Translates to: SLTSMSCSKGEQQSALPQFRHKI*LSLALV
Trigger: CACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAA...CTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTCTTTCCGGCACAAGATCTaGCTGTCCTTAGCACTAGTG +
Preference number: 4 (lower is better)
Translates to: CPPVPCEFPACHRAREISFRHKI*LSLALV
Trigger: CACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAA...AGAAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCTTCCGGCACAAGATCTaGCTGTCCTTAGCACTAGTG +
Preference number: 4 (lower is better)
Translates to: ATNANPIGEGSPETCGGCFRHKI*LSLALV
Trigger: CACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAA...GCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp GCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACATTGTGGCAGAAACTCTGGCACCTGCAGTaGTGGGAGAGGCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: AHPITRVKVKAFFTLWQKLWHLQ*WERLAF
Trigger: AAAGGCCAGCCTCTCCCACCACTGCAGGTGCCAGAG...TTTCTGCCACAATGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCCACTCTTCAACCATGTaGCCACCTTCTTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGHSSTM*PPSSEA
Trigger: AGCTTCAGAAGAAGGTGGCCACATGGTTGAAGAGTG...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGGGGACAAAGCCTGGTaGCATTTTGCCCAGCACTCC +
Preference number: 4 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPGDKAW*HFAQHS
Trigger: GGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCC...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp AATTTCATTCTGGAGTCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCGGTTGTGGCAGGGCCTaGGCTCACCCCATGAGGACC +
Preference number: 4 (lower is better)
Translates to: NFILESCSKVTCLMYSLIGCGRA*AHPMRT
Trigger: GGTCCTCATGGGGTGAGCCCAGGCCCTGCCACAACC...GATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAGATGTCTCTTTAGAGTaGAGGGTAGCTCCCACAACA +
Preference number: 4 (lower is better)
Translates to: ALSWFGAKPTASHTWQQGDVSLE*RVAPTT
Trigger: TGTTGTGGGAGCTACCCTCCACTCTAAAGAGACATC...TCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTGAAAACCCTTGGCCTTaGAGATGGAGTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: EDRMCWACRFQDSALMSSENPWP*RWSWDL
Trigger: CAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTC...AGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGTTGTTCAAAGGGTAGGGGTGAAAACCCTTaGCCTTGGAGATGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SLGSAQHPSLTSMSCSKGRGENP*PWRWSW
Trigger: CCAACTCCATCTCCAAGGCCAAGGGTTTTCACCCCT...ACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCGGAATCTTGAGGTCCTaGGTGAGGAGTCAAGATGCC +
Preference number: 4 (lower is better)
Translates to: SATNANPIGEGSPETCGGGILRS*VRSQDA
Trigger: GGCATCTTGACTCCTCACCCAGGACCTCAAGATTCC...GCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR CCA 90 bp CACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAGGGCATAAATGTCTCTaGCAGCTTGTTCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: HSAGLEPSLQHHIPGSKEGHKCL*QLVPLE
Trigger: CTCCAGAGGAACAAGCTGCCAGAGACATTTATGCCC...TTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAGCAGTAATTGGTGCTaGGGGCATAAATGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: ALSWFGAKPTASHTWQQGSSNWC*GHKCLW
Trigger: CCAGAGACATTTATGCCCCCAGCACCAATTACTGCT...TCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTGAGCATGACTCACACTaGAGACAGGGGGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: AALEENHSLIWLQFQNWAEHDSH*RQGAVR
Trigger: CCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp AGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTTCTCCTGGAACTCCTaGGGGAGCATGACTCACACT +
Preference number: 4 (lower is better)
Translates to: SATNANPIGEGSPETCGGFSWNS*GSMTHT
Trigger: AGTGTGAGTCATGCTCCCCCAGGAGTTCCAGGAGAA...GCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCACAGGCTGAGTTCTCCTaGAACTCCTGGGGGAGCATG +
Preference number: 4 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPQAEFS*NSWGSM
Trigger: CATGCTCCCCCAGGAGTTCCAGGAGAACTCAGCCTG...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCAGACAGGGAGCAGCGTTaGAGAAGCGCCTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSDREQR*RSASKL
Trigger: CAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTC...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAACAGCATCACATACCTaGCAGCAAGGAAAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: ALSWFGAKPTASHTWQQGTASHT*QQGKES
Trigger: CGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGT...TCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AAGGAGTCATGTTCTGAGGGACCAGCTCATCAAAGAAGGCTGAGGAAGCAGAGGAAGCAGGCACTCAGCTaGTTTGGAGCCAAGCCTACA +
Preference number: 4 (lower is better)
Translates to: KESCSEGPAHQRRLRKQRKQALS*FGAKPT
Trigger: TGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGCTT...CCTCTGCTTCCTCAGCCTTCTTTGATGAGCTGGTCCCTCAGAACATGACTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGGGCCTGAGAGTGTCTTaGACAGATCCTAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRGLRVS*TDPRRP
Trigger: TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCC...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGGCCTGAGAGTGTCTTaGACAGATCCTAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LVWSQAYSITYLAARKRVGLRVS*TDPRRP
Trigger: TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCC...GACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTGTTCCCCATAGGCTGTaGTTCCCCTGCTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: AALEENHSLIWLQFQNWAVPHRL*FPCSCL
Trigger: GAGACAGGAGCAGGGGAACCACAGCCTATGGGGAAC...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp TGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTGGAGGCTGCTGTGACCTACAAACTCCATTTTaGGAGGAATCCTTGAGACAC +
Preference number: 4 (lower is better)
Translates to: WACRFQDSALMSSGGCCDLQTPF*EESLRH
Trigger: GTGTCTCAAGGATTCCTCCCAAAATGGAGTTTGTAG...GTCACAGCAGCCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR CCA 90 bp TTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGATCGCCATCCTAAAGTaGCAGTTTAGTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: FPWAEDSHLAPRHSSTMWIAILK*QFSQEL
Trigger: GAGTTCCTGACTAAACTGCCACTTTAGGATGGCGAT...CCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp GGTGAAAACCCTTGGCCTTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGAATCGCCATCCTAAAGTaGCAGTTTAGTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: GENPWPWRWSWDLVRRLGIAILK*QFSQEL
Trigger: GAGTTCCTGACTAAACTGCCACTTTAGGATGGCGAT...TCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp AGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCGTGTGCTTCTGTTTCTaGGCAATCACAGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SATNANPIGEGSPETCGGVCFCF*AITGSF
Trigger: GAAGGAGCCTGTGATTGCTCAGAAACAGAAGCACAC...GCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000462434.5
CDS-3UTR TCA 90 bp TTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATGGTGTGCTTCTGTTTCTaGGCAATCACAGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LEMELGPGEKAGIPICKMVCFCF*AITGSF
Trigger: GAAGGAGCCTGTGATTGCTCAGAAACAGAAGCACAC...CATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000469546.6
CDS-3UTR TCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTTCCCAATCTGTAAGATaGTGTCTCTTTAGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPASQSVR*CLFRVE
Trigger: CTCCACTCTAAAGAGACATCATCTTACAGATTGGGA...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGCTGAAGCTGCAGGCTaGGTTCTCCTGGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: KDSATNANPIGEGSPETCAEAAG*VLLELL
Trigger: CAGGAGTTCCAGGAGAACTCAGCCTGCAGCTTCAGC...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp GCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGATTTGGGAGGAATCCTTaGGACACCCAATTTGACCTA +
Preference number: 4 (lower is better)
Translates to: ALSWFGAKPTASHTWQQGFGRNP*DTQFDL
Trigger: TAGGTCAAATTGGGTGTCTCAAGGATTCCTCCCAAA...TCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTTCCAGAAGCCCACTaGCAAAGCTCCCCCAGACCA +
Preference number: 4 (lower is better)
Translates to: AALEENHSLIWLQFQNWAFPEAH*QSSPRP
Trigger: TGGTCTGGGGGAGCTTTGGCAGTGGGCTTCTGGAAA...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR GCA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAATGTCCTCTGGAGGCTaGTGTGACTTGGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPMSSGG*CDLDPR
Trigger: CCTGGGATCCAAGTCACAGCAGCCTCCAGAGGACAT...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR GCA 90 bp CGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGCATCAAAGCACCAGCTaGTCTGTGTTGGTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: RQSFLSWFCSAPIPHVHEHQSTS*SVLVAY
Trigger: ATAAGCTACCAACACAGAGCAGCTGGTGCTTTGATG...CTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTAGCATCTTTTCACTTTaGAGTAAAGCTTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPSIFSL*SKACWL
Trigger: GAGCCAGCAAGCTTTACTGCAAAGTGAAAAGATGCT...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGCATCTTTTCACTTTaGAGTAAAGCTTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AGTQLVWSQAYSITYLAASIFSL*SKACWL
Trigger: GAGCCAGCAAGCTTTACTGCAAAGTGAAAAGATGCT...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATATCCTTCCAATTCTTTTaGACAACACAGGCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDISFQFF*TTQARS
Trigger: GCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGA...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTAGGTTAGTGCCCTGCTaGCCTCCTGTTCCATGCGAG +
Preference number: 4 (lower is better)
Translates to: ILPQVLTECSIRESEELIRLVPC*PPVPCE
Trigger: CTCGCATGGAACAGGAGGGCAGCAGGGCACTAACCT...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCAGGCCTGGGGCCCAGGTaGCCTGTAGTCACTTATATT +
Preference number: 4 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSGLGPR*PVVTYI
Trigger: AATATAAGTGACTACAGGGCACCTGGGCCCCAGGCC...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGTTCCTCTCTTGGTTCTaGTCAGCACCCATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LGYREIRTWKYQVRGREKFLSWF*SAPIPH
Trigger: GTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAA...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp AGTGGCCTCCTAGCAAGAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGAAGACAGTGCCACAAATaGAAATCCAATCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SGLLAREAAWFRPAAYERRQCHK*KSNRRR
Trigger: CCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCT...TCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGCTAGGAGGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp CAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCTCGAAGCAGCTTTATTaGACCATTAAGTACATCACT +
Preference number: 4 (lower is better)
Translates to: QVLQSHGGQSLVAFCPALSKQLY*TIKYIT
Trigger: AGTGATGTACTTAATGGTGCAATAAAGCTGCTTCGA...GAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp GGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGGGAAAAGCGGGCTTCAGGAACTaGCACAGCATCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: GAKPTASHTWQQGKESGKAGFRN*HSIFSL
Trigger: AAGTGAAAAGATGCTGTGGCAGTTCCTGAAGCCCGC...TTTTCCCGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCAGCCTGGCTTGCTCTAAGGTCACCTaGCTGATGTATAGTCTCATC +
Preference number: 4 (lower is better)
Translates to: QDLAVLSTSEQQLSISLACSKVT*LMYSLI
Trigger: GATGAGACTATACATCAGGCAGGTGACCTTAGAGCA...AGCCAGGCTGATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAAGGCAGAAAACTGACATaGCCCTCAGCCCACTGTGCG +
Preference number: 4 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKGRKLT*PSAHCA
Trigger: CGCACAGTGGGCTGAGGGCCATGTCAGTTTTCTGCC...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR CCA 90 bp CAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGAGGGGGCAGATGTTCCTGTaGCCAGATACAAAGGGTATT +
Preference number: 4 (lower is better)
Translates to: QMQIQSEKVALRHVVAARGQMFL*PDTKGI
Trigger: AATACCCTTTGTATCTGGCCACAGGAACATCTGCCC...CCTCGCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp ATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACACAAGATTTCAGAATCGCTaGCCCCTGAAGCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: MSVAKPVPLSSSSGYRYTRFQNR*PLKPGG
Trigger: ACCTCCTGGCTTCAGGGGCCAGCGATTCTGAAATCT...TGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGGATCCCAGGGTCATTaGCACATTCAAGTTATTCAG +
Preference number: 4 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPGSQGH*HIQVIQ
Trigger: CTGAATAACTTGAATGTGCCAATGACCCTGGGATCC...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGGGAAAAGAAGACAGAATGTGTTaGGCTTGCCGGTTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: GAKPTASHTWQQGKESGKEDRMC*ACRFQD
Trigger: GTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC...TTTTCCCGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GGTCCCACGGTCCCTGAAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGACAGAATGTGTTaGGCTTGCCGGTTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: GPTVPEILQGPSNNKSQGEDRMC*ACRFQD
Trigger: GTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC...ACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTTCAGGGACCGTGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAAGACAGAATGTGTTaGGCTTGCCGGTTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKEDRMC*ACRFQD
Trigger: GTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTAACAGCACTAACTGGGTaGCTATGTCAGGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: EYVSSKASASLQFFRLQVTALTG*LCQDAR
Trigger: CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGT...TACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGTTCCGGCACAAGATCTaGCTGTCCTTAGCACTAGTG +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKFRHKI*LSLALV
Trigger: CACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAA...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCCCTCACGTCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGCACTCTTCAACCATGTaGCCACCTTCTTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLTSMSCSKGEQQSALPQHSSTM*PPSSEA
Trigger: AGCTTCAGAAGAAGGTGGCCACATGGTTGAAGAGTG...CTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAACCAAGCAGGAGAGCCTaGCTTAGGAGTCCATCAATA +
Preference number: 4 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKPSRRA*LRSPSI
Trigger: TATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGG...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAATCTGTACCCCCAGCCTaGGCCAGGATAATGGCATCA +
Preference number: 4 (lower is better)
Translates to: GEDILPQVLTECSIRESESVPPA*ARIMAS
Trigger: TGATGCCATTATCCTGGCCCAGGCTGGGGGTACAGA...TTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCATTTTGGTTTTCTTCTTaGCCAAGTAGCGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPFWFSS*PSSAPV
Trigger: CACAGGAGCGCTACTTGGCCAAGAAGAAAACCAAAA...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCAGCCTGGCTTTTTGGTTTTCTTCTTaGCCAAGTAGCGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: QDLAVLSTSEQQLSISLAFWFSS*PSSAPV
Trigger: CACAGGAGCGCTACTTGGCCAAGAAGAAAACCAAAA...AGCCAGGCTGATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTACACATAACAGAGTCTaGCTTCGGAGGTTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: EDRMCWACRFQDSALMSSTHNRV*LRRLVP
Trigger: GGGCACTAACCTCCGAAGCCAGACTCTGTTATGTGT...AGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAACACATAACAGAGTCTaGCTTCGGAGGTTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKTHNRV*LRRLVP
Trigger: GGGCACTAACCTCCGAAGCCAGACTCTGTTATGTGT...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACATTGTGGCAGAAAGGGGACAAAGCCTGGTaGCATTTTGCCCAGCACTCC +
Preference number: 4 (lower is better)
Translates to: AHPITRVKVKAFFTLWQKGDKAW*HFAQHS
Trigger: GGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCC...TTTCTGCCACAATGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CTCTGGCGGGCTTCAGGAACTGCCACAGCATCTTTTCACTTTGCAGTAAAGCTTAAAGGGGGAGACTGTTaGCCCAAGACAGCAGAACCT +
Preference number: 4 (lower is better)
Translates to: LWRASGTATASFHFAVKLKGGDC*PKTAEP
Trigger: AGGTTCTGCTGTCTTGGGCCAACAGTCTCCCCCTTT...AAGCTTTACTGCAAAGTGAAAAGATGCTGTGGCAGTTCCTGAAGCCCGCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
CDS-3UTR CCA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCACCTTGGAGATGGAGTTaGGACCTGGTGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSPWRWS*DLVRRL
Trigger: CAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGG...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGCAAGATGCCAGTGGTTaGGAGGACACTAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: LGYREIRTWKYQVRGREKQDASG*EDTRAW
Trigger: CCATGCTCTAGTGTCCTCCCAACCACTGGCATCTTG...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR CCA 90 bp GAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGCCACCTTCTTCTAACTGGAGCAGTAATTaGTGCTGGGGGCATAAATGT +
Preference number: 4 (lower is better)
Translates to: EDSHLAPRHSSTMWPPSSNWSSN*CWGHKC
Trigger: ACATTTATGCCCCCAGCACCAATTACTGCTCCAGTT...AGAAGAAGGTGGCCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGAACTGGAGCAGTAATTaGTGCTGGGGGCATAAATGT +
Preference number: 4 (lower is better)
Translates to: VDHPLSTALTGWLCQDARNWSSN*CWGHKC
Trigger: ACATTTATGCCCCCAGCACCAATTACTGCTCCAGTT...CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTGGTGAGGCTCATAACTaGAGCAGTAATTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGLEPSLQHHIPGSKEKSGEAHN*SSNWCW
Trigger: CCAGCACCAATTACTGCTCCAGTTATGAGCCTCACC...ACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCCCTGAAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCGGCACTCAGCTGGTTTaGAGCCAAGCCTACAGCATC +
Preference number: 4 (lower is better)
Translates to: SLKYYRAHPITRVKVKAFGTQLV*SQAYSI
Trigger: GATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCC...GAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTTCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp TCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCTCCTTGCACCTGAGCGGCCTGAGAGTGTCTTaGACAGATCCTAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SCSKVTCLMYSLISLHLSGLRVS*TDPRRP
Trigger: TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCC...GCTCAGGTGCAAGGAGATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAAGGCTCCAACATAGGTaGAGTCAAGGGCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPRLQHR*SQGQFP
Trigger: GGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTCCAAACCCCGGGCCCTaGTCTCCCAATCTCCAATAT +
Preference number: 4 (lower is better)
Translates to: AALEENHSLIWLQFQNWAPNPGP*SPNLQY
Trigger: ATATTGGAGATTGGGAGACCAGGGCCCGGGGTTTGG...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCACCAAACCCCGGGCCCTaGTCTCCCAATCTCCAATAT +
Preference number: 4 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPPNPGP*SPNLQY
Trigger: ATATTGGAGATTGGGAGACCAGGGCCCGGGGTTTGG...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp GGTCCCACGGTCCCTGAAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTATCCTTTCAGGAAGATaGGCACTAGGGCAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: GPTVPEILQGPSNNKSQGILSGR*ALGQRC
Trigger: GCACCTTTGCCCTAGTGCCCATCTTCCTGAAAGGAT...ACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTTCAGGGACCGTGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCGAGTGTGGCACAAAATaGATCTATAGAAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: PSGPAEPWGTKPGGILPSECGTK*IYRREK
Trigger: TTTCTCTCTTCTATAGATCCATTTTGTGCCACACTC...GCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp CAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGAGGATGTGCCATTTGTGCTaGAGGAGGAATCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: QMQIQSEKVALRHVVAARMCHLC*RRNLAV
Trigger: AACAGCTAGATTCCTCCTTCAGCACAAATGGCACAT...CCTCGCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp TCCCTCACGTCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGATGTGCCATTTGTGCTaGAGGAGGAATCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SLTSMSCSKGEQQSALPQMCHLC*RRNLAV
Trigger: AACAGCTAGATTCCTCCTTCAGCACAAATGGCACAT...CTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGACGTGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GAAGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCATGTGCCATTTGTGCTaGAGGAGGAATCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: EVDHPLSTALTGWLCQDAMCHLC*RRNLAV
Trigger: AACAGCTAGATTCCTCCTTCAGCACAAATGGCACAT...GGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR TCA 90 bp GAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGCCACCTTCTTCTCCAGAGAAGGGTCCCTaGAATCAACCTCAAATATTT +
Preference number: 4 (lower is better)
Translates to: EDSHLAPRHSSTMWPPSSPEKGP*NQPQIF
Trigger: AAATATTTGAGGTTGATTTCAGGGACCCTTCTCTGG...AGAAGAAGGTGGCCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTTATTCAGATCCCAAATaGAGATTTCAGAATCGCTGG +
Preference number: 4 (lower is better)
Translates to: LQHRWSQGQFPIGCGSPAYSDPK*RFQNRW
Trigger: CCAGCGATTCTGAAATCTTCATTTGGGATCTGAATA...AGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp GGTGAAAACCCTTGGCCTTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATATTCAGATCCCAAATaGAGATTTCAGAATCGCTGG +
Preference number: 4 (lower is better)
Translates to: GENPWPWRWSWDLVRRLGYSDPK*RFQNRW
Trigger: CCAGCGATTCTGAAATCTTCATTTGGGATCTGAATA...TCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGGCTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTTATTCAGATCCCAAATaGAGATTTCAGAATCGCTGG +
Preference number: 4 (lower is better)
Translates to: RLQHRWSQGQFPIGCGSPYSDPK*RFQNRW
Trigger: CCAGCGATTCTGAAATCTTCATTTGGGATCTGAATA...AGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCACTCCTGCAGCTCAGCTaGTCGCATCAGGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPLLQLS*SHQEFR
Trigger: TCTGAATTCCTGATGCGATCAGCTGAGCTGCAGGAG...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp TCAAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGATGACTGAGGGGTaGAAACCCTTGGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SKTVPQMQIQSEKVALRHVMTEG*KPLALE
Trigger: CTCCAAGGCCAAGGGTTTTCACCCCTCAGTCATCAC...ATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp AGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTAGCCACGACATGAGGTaGGAGTGTCCCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: SAGRESFLNMAPIPELGFSHDMR*ECPLTE
Trigger: CTCTGTGAGGGGACACTCTCACCTCATGTCGTGGCT...AAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp AGAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCAACAAAAGACCCACATaGTGGGTCACAGCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: RRQNVLGLPVPRQCLDVLNKRPT*WVTAEV
Trigger: TACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTT...GAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGCCAGCTTGTGAAACCTaGTCAAGGCAGAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: LGYREIRTWKYQVRGREKPACET*SRQKGL
Trigger: GAGTCCTTTCTGCCTTGAGCAGGTTTCACAAGCTGG...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR GCA 90 bp AGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTGAGATCCCACACAACTaGCTTGCCACTGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SAGRESFLNMAPIPELGFEIPHN*LATGVS
Trigger: GCTCACCCCAGTGGCAAGGCAGTTGTGTGGGATCTC...AAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAAGTTTGGAGGCCTGGCTaGAGAAGGCCTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKVWRPG*RRPVVC
Trigger: ACAGACAACAGGCCTTCTGCAGCCAGGCCTCCAAAC...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CACAGAAGGAATGGCCTTGGGCTAAGGCTCCAACATAGGTGGAGTCAAGGGCAGTCCTTCCAATTCTTTTaGACAACACAGGCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: HRRNGLGLRLQHRWSQGQSFQFF*TTQARS
Trigger: GCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGA...CTGCCCTTGACTCCACCTATGTTGGAGCCTTAGCCCAAGGCCATTCCTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTTGCCCTCCTGTTCCATaGGAGTTCCCAGCATGTCAC +
Preference number: 4 (lower is better)
Translates to: ILPQVLTECSIRESEELICPPVP*EFPACH
Trigger: GTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGGAACTTGCACCCTTTaGCCTCCTAATAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPGTCTL*PPNSCG
Trigger: GCCACAGCTATTAGGAGGGCAAAGGGTGCAAGTTCC...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR GCA 90 bp AGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCCTGCTCAAAGCTTCCTaGATCCACACATCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: SSAGRESFLNMAPIPELGLLKAS*IHTSGN
Trigger: GTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAG...GCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGAGAAGTCCCCTCTTCTaGAGGGAGGAGTTATGTAAC +
Preference number: 4 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRRSPLF*REELCN
Trigger: GTTACATAACTCCTCCCTGCAGAAGAGGGGACTTCT...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTGAAGAACTGATTCTATaGCCTGCCTCCAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AALEENHSLIWLQFQNWAEELIL*PASRPE
Trigger: CTCAGGCCTGGAGGCAGGGCATAGAATCAGTTCTTC...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp GGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGGGGGAAAAGACACCTaGATCGCCATCCTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: GEDILPQVLTECSIRESEGGKDT*IAILKW
Trigger: CCACTTTAGGATGGCGATGCAGGTGTCTTTTCCCCC...TTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp TCCCTGAAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCGGGGGAAAAGACACCTaGATCGCCATCCTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: SLKYYRAHPITRVKVKAFGGKDT*IAILKW
Trigger: CCACTTTAGGATGGCGATGCAGGTGTCTTTTCCCCC...GAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTTCAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp GGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGGGAAAATTCATTCTGGAGTCTTaGTCTAAGGTCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GAKPTASHTWQQGKESGKFILES*SKVTCL
Trigger: CAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAA...TTTTCCCGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCATCGCTGGGCTCCATGCCTaGACAGCTGGCCGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: GRESFLNMAPIPELGFIIAGLHA*TAGRSS
Trigger: ACTTGAGCGGCCAGCTGTCCAGGCATGGAGCCCAGC...GATGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGGTTTAGGGTATTGGCTGGCTaGGCTCCATGCCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: HPSNSFAQHRLEARRFWFRVLAG*APCLDS
Trigger: GCTGTCCAGGCATGGAGCCCAGCCAGCCAATACCCT...AAACCAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGGGAAAAGGGCAGATGTTCCTGTaGCCAGATACAAAGGGTATT +
Preference number: 4 (lower is better)
Translates to: GAKPTASHTWQQGKESGKGQMFL*PDTKGI
Trigger: AATACCCTTTGTATCTGGCCACAGGAACATCTGCCC...TTTTCCCGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTGCCAGGAGGTTGCCCTaGAAAGGATTCAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: ILPQVLTECSIRESEELIARRLP*KGFKSR
Trigger: CCTCGACTTGAATCCTTTCCAGGGCAACCTCCTGGC...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CCA 90 bp GGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAACAACTGCCTTGCCACTaGGGTGAGCAGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: GEDILPQVLTECSIRESEQLPCH*GEQKTE
Trigger: TTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTG...TTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GTGAGGAGTCAAGATGCCAGTGGTTGGGAGGACACTAGAGCATGGGGCACCTGGTTAGGAATTTCATTCTaGAGTCTTGCTCTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: VRSQDASGWEDTRAWGTWLGISF*SLALRS
Trigger: TGACCTTAGAGCAAGACTCCAGAATGAAATTCCTAA...CCAGGTGCCCCATGCTCTAGTGTCCTCCCAACCACTGGCATCTTGACTCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR CCA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTATGGGGGACAAAGCCTaGTGGCATTTTGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KDSATNANPIGEGSPETCMGDKA*WHFAQH
Trigger: GTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCAT...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp AGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCAAAGGGGGAGACTGTTaGCCCAAGACAGCAGAACCT +
Preference number: 4 (lower is better)
Translates to: SSAGRESFLNMAPIPELGKGGDC*PKTAEP
Trigger: AGGTTCTGCTGTCTTGGGCCAACAGTCTCCCCCTTT...GCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp TTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATGGATGTCTCTTTAGAGTaGAGGGTAGCTCCCACAACA +
Preference number: 4 (lower is better)
Translates to: LEMELGPGEKAGIPICKMDVSLE*RVAPTT
Trigger: TGTTGTGGGAGCTACCCTCCACTCTAAAGAGACATC...CATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGGATGTCTCTTTAGAGTaGAGGGTAGCTCCCACAACA +
Preference number: 4 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRDVSLE*RVAPTT
Trigger: TGTTGTGGGAGCTACCCTCCACTCTAAAGAGACATC...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGTTGTTCAAAGGGTAGCAGTAATTGGTGCTaGGGGCATAAATGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLGSAQHPSLTSMSCSKGSSNWC*GHKCLW
Trigger: CCAGAGACATTTATGCCCCCAGCACCAATTACTGCT...ACCCTTTGAACAACTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGCAGTAATTGGTGCTaGGGGCATAAATGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKSSNWC*GHKCLW
Trigger: CCAGAGACATTTATGCCCCCAGCACCAATTACTGCT...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTAGCAGTAATTGGTGCTaGGGGCATAAATGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: EDRMCWACRFQDSALMSSSSNWC*GHKCLW
Trigger: CCAGAGACATTTATGCCCCCAGCACCAATTACTGCT...AGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTGACAGGGAGCAGCGTTaGAGAAGCGCCTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SAGRESFLNMAPIPELGFDREQR*RSASKL
Trigger: CAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTC...AAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CTCTGGCGGGCTTCAGGAACTGCCACAGCATCTTTTCACTTTGCAGTAAAGCTTGCAAGAGAGGCTGCCTaGTTTAGACCAGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: LWRASGTATASFHFAVKLAREAA*FRPAAY
Trigger: ATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGC...AAGCTTTACTGCAAAGTGAAAAGATGCTGTGGCAGTTCCTGAAGCCCGCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAACCAAACCCCGGGCCCTaGTCTCCCAATCTCCAATAT +
Preference number: 4 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKPNPGP*SPNLQY
Trigger: ATATTGGAGATTGGGAGACCAGGGCCCGGGGTTTGG...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTATCCTTTCAGGAAGATaGGCACTAGGGCAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPILSGR*ALGQRC
Trigger: GCACCTTTGCCCTAGTGCCCATCTTCCTGAAAGGAT...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp AGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACTACAAACTCCATTTTaGGAGGAATCCTTGAGACAC +
Preference number: 4 (lower is better)
Translates to: RVNSSQLYPRPWATEKYGLQTPF*EESLRH
Trigger: GTGTCTCAAGGATTCCTCCCAAAATGGAGTTTGTAG...TCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp TCCCAGCAAAGGGGTCCCACGGTCCCTGAAATACTACAGGGCCCATCCAATAACCTACAAACTCCATTTTaGGAGGAATCCTTGAGACAC +
Preference number: 4 (lower is better)
Translates to: SQQRGPTVPEILQGPSNNLQTPF*EESLRH
Trigger: GTGTCTCAAGGATTCCTCCCAAAATGGAGTTTGTAG...GTTATTGGATGGGCCCTGTAGTATTTCAGGGACCGTGGGACCCCTTTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp GGGCCCTGGTCTCCCAATCTCCAATATCTCCGCTTCTCAAGCCATATGTCTCTCATCGCCATCCTAAAGTaGCAGTTTAGTCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: GPWSPNLQYLRFSSHMSLIAILK*QFSQEL
Trigger: GAGTTCCTGACTAAACTGCCACTTTAGGATGGCGAT...GAGAGACATATGGCTTGAGAAGCGGAGATATTGGAGATTGGGAGACCAGGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGGAGTCCATCAATATCTaGCTGCAGAAGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRESINI*LQKACC
Trigger: ACAACAGGCCTTCTGCAGCCAGATATTGATGGACTC...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469546.6
3UTR CAA 72 bp AGACATAAAGGAGTAAAAAGCAGGCACTCAGCTGGTTaGGAGCCAAGCCTACAGCATCACATACCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RHKGVKSRHSAG*EPSLQHHIPGS
Trigger: GCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGCTTTTTACTCCTTTATGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAACCAGAGAAGGGTCCCTaGAATCAACCTCAAATATTT +
Preference number: 4 (lower is better)
Translates to: CSKGEQQSALPQTLGYREPEKGP*NQPQIF
Trigger: AAATATTTGAGGTTGATTTCAGGGACCCTTCTCTGG...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GAGCATGACTCACACTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTTATTCAGATCCCAAATaGAGATTTCAGAATCGCTGG +
Preference number: 4 (lower is better)
Translates to: EHDSHWRQGAVREESLVAYSDPK*RFQNRW
Trigger: CCAGCGATTCTGAAATCTTCATTTGGGATCTGAATA...AGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp ACCACATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGCGCAAGTCCCACAGCTaGATCACGGGAAGTCGATCA +
Preference number: 4 (lower is better)
Translates to: TTSFQFFCTTQARSEEILRKSHS*ITGSRS
Trigger: TGATCGACTTCCCGTGATTCAGCTGTGGGACTTGCG...CAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACATTGTGGCAGAAACTCCTGCAGCTCAGCTaGTCGCATCAGGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: AHPITRVKVKAFFTLWQKLLQLS*SHQEFR
Trigger: TCTGAATTCCTGATGCGATCAGCTGAGCTGCAGGAG...TTTCTGCCACAATGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp AGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCGTGGCCACCTTCTTCTaGAGCTCATCTTTACTGTAT +
Preference number: 4 (lower is better)
Translates to: SATNANPIGEGSPETCGGVATFF*SSSLLY
Trigger: ATACAGTAAAGATGAGCTTCAGAAGAAGGTGGCCAC...GCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp CTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGTGGCCACCTTCTTCTaGAGCTCATCTTTACTGTAT +
Preference number: 4 (lower is better)
Translates to: LVWSQAYSITYLAARKRVVATFF*SSSLLY
Trigger: ATACAGTAAAGATGAGCTTCAGAAGAAGGTGGCCAC...GACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCCATCAATATCTTTTGTaGTGGGGATCTCCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: APVSQPKTASSKRQFIPFHQYLL*WGSPKE
Trigger: CTCCTTGGGAGATCCCCATCACAAAAGATATTGATG...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp CAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGAGGTCCCAATCTGTAAGATaGTGTCTCTTTAGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: QMQIQSEKVALRHVVAARSQSVR*CLFRVE
Trigger: CTCCACTCTAAAGAGACATCATCTTACAGATTGGGA...CCTCGCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp AGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGTCCCAATCTGTAAGATaGTGTCTCTTTAGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: SRSSSEHSTNWVAMSGCQSQSVR*CLFRVE
Trigger: CTCCACTCTAAAGAGACATCATCTTACAGATTGGGA...CTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp TCCCTGAAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCGAGTTGTTCAAAGGGTaGACAGCAGTCAGCTCTACC +
Preference number: 4 (lower is better)
Translates to: SLKYYRAHPITRVKVKAFELFKG*TAVSST
Trigger: GGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTC...GAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTTCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAATTGAGACACCCAATTTaGCCTAGAAAGGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKLRHPI*PRKVRL
Trigger: GAGTCTGACCTTTCTAGGTCAAATTGGGTGTCTCAA...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAATATATACCACCTCACTaGTCCCCAGGTTCCGGCACA +
Preference number: 4 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKYIPPH*SPGSGT
Trigger: TGTGCCGGAACCTGGGGAGCAGTGAGGTGGTATATA...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTCTAGCATCTTTTCACTTTaGAGTAAAGCTTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CPPVPCEFPACHRAREISSIFSL*SKACWL
Trigger: GAGCCAGCAAGCTTTACTGCAAAGTGAAAAGATGCT...AGAAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTGTCACCTTCAGGAACTaGCACAGCATCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: AGLEPSLQHHIPGSKEKSVTFRN*HSIFSL
Trigger: AAGTGAAAAGATGCTGTGGCAGTTCCTGAAGGTGAC...ACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000469546.6
CDS-3UTR GCA 90 bp GCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCTCCTTCCAATTCTTTTaGACAACACAGGCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: ATNANPIGEGSPETCGGCSFQFF*TTQARS
Trigger: GCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGA...GCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp GGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAAGCGCCTCAAAGCTaGTCTTCAAGGACTGATGCT +
Preference number: 4 (lower is better)
Translates to: GEDILPQVLTECSIRESEEAPQS*SSRTDA
Trigger: AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTC...TTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TTCCCTTGGGCTGAGGACTCTCACCTAGCCCCACGTCACTCTTCAACCATGTGGTCGAAGCAGCTTTATTaGACCATTAAGTACATCACT +
Preference number: 4 (lower is better)
Translates to: FPWAEDSHLAPRHSSTMWSKQLY*TIKYIT
Trigger: AGTGATGTACTTAATGGTGCAATAAAGCTGCTTCGA...CCACATGGTTGAAGAGTGACGTGGGGCTAGGTGAGAGTCCTCAGCCCAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp CTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCTGCTCTAAGGTCACCTaGCTGATGTATAGTCTCATC +
Preference number: 4 (lower is better)
Translates to: LVWSQAYSITYLAARKRVCSKVT*LMYSLI
Trigger: GATGAGACTATACATCAGGCAGGTGACCTTAGAGCA...GACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACACACCATGCTCTAAGGTCACCTaGCTGATGTATAGTCTCATC +
Preference number: 4 (lower is better)
Translates to: SVAKPVPLSSSSGYRYTPCSKVT*LMYSLI
Trigger: GATGAGACTATACATCAGGCAGGTGACCTTAGAGCA...TGGTGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCTCCTTGCACCTGAGCTTCATTCTGGAGTCTTaGTCTAAGGTCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SCSKVTCLMYSLISLHLSFILES*SKVTCL
Trigger: CAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAA...GCTCAGGTGCAAGGAGATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AATTTCTCTGTGCCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCGGTCTATCCTGTAGGTaGCAGAAAACTGACATGGCC +
Preference number: 4 (lower is better)
Translates to: NFSVPEYVSSKASASLQFGLSCR*QKTDMA
Trigger: GGCCATGTCAGTTTTCTGCCACCTACAGGATAGACC...GAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CAAGCTCCTGTTAAGAACCATCACCTTCTCCATCAGGTCCTGCAGAGCCATGGGCCCGAAGACAGGATGTaGGTCACATTGTATAGAATA +
Preference number: 4 (lower is better)
Translates to: QAPVKNHHLLHQVLQSHGPEDRM*VTLYRI
Trigger: TATTCTATACAATGTGACCCACATCCTGTCTTCGGG...CCCATGGCTCTGCAGGACCTGATGGAGAAGGTGATGGTTCTTAACAGGAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CCA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCATTCCGGCACAAGATCTaGCTGTCCTTAGCACTAGTG +
Preference number: 4 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPFRHKI*LSLALV
Trigger: CACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAA...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp CTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGATTAGGAATTTCATTCTaGAGTCTTGCTCTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LQGPAQSFLHPHIGQPHGLGISF*SLALRS
Trigger: TGACCTTAGAGCAAGACTCCAGAATGAAATTCCTAA...TCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp ACCACATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGGTGTGTTTGGAGGCCTaGCTGCAGAAGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TTSFQFFCTTQARSEEILVCLEA*LQKACC
Trigger: ACAACAGGCCTTCTGCAGCCAGGCCTCCAAACACAC...CAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCCCAAGCAGGAGAGCCTaGCTTAGGAGTCCATCAATA +
Preference number: 4 (lower is better)
Translates to: SSAGRESFLNMAPIPELGPSRRA*LRSPSI
Trigger: TATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGG...GCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp GGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGGGAAAATTTTGGTTTTCTTCTTaGCCAAGTAGCGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GAKPTASHTWQQGKESGKFWFSS*PSSAPV
Trigger: CACAGGAGCGCTACTTGGCCAAGAAGAAAACCAAAA...TTTTCCCGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATGGGGGACAAAGCCTaGTGGCATTTTGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SAGRESFLNMAPIPELGFMGDKA*WHFAQH
Trigger: GTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCAT...AAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp AAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACAGCTGAGCACAGTCCCTaGGTAGAAAGCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: KYYRAHPITRVKVKAFFTAEHSP*VESSWQ
Trigger: CTGCCATGAGCTTTCTACCCAGGGACTGTGCTCAGC...TGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp TCAAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGAAAACCCTTGGCCTTaGAGATGGAGTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: SKTVPQMQIQSEKVALRHENPWP*RWSWDL
Trigger: CAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTC...ATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAACTGGAGCAGTAATTaGTGCTGGGGGCATAAATGT +
Preference number: 4 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKNWSSN*CWGHKC
Trigger: ACATTTATGCCCCCAGCACCAATTACTGCTCCAGTT...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GAATCACGGGAAGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTAACTGGAGCAGTAATTaGTGCTGGGGGCATAAATGT +
Preference number: 4 (lower is better)
Translates to: ESREVDHPLSTALTGWLCNWSSN*CWGHKC
Trigger: ACATTTATGCCCCCAGCACCAATTACTGCTCCAGTT...ACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTCCCGTGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCCCTGAAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCGCAAGAGAGGCTGCCTaGTTTAGACCAGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: SLKYYRAHPITRVKVKAFAREAA*FRPAAY
Trigger: ATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGC...GAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTTCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp TGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGAATCATTCCTTAATATaGCTCCAATTCCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: CKALLKASCIHTSGNLMENHSLI*LQFQNW
Trigger: CCAGTTCTGGAATTGGAGCCATATTAAGGAATGATT...CTCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp AGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCCCAGAGAAGGGTCCCTaGAATCAACCTCAAATATTT +
Preference number: 4 (lower is better)
Translates to: SATNANPIGEGSPETCGGPEKGP*NQPQIF
Trigger: AAATATTTGAGGTTGATTTCAGGGACCCTTCTCTGG...GCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp CAAGCTCCTGTTAAGAACCATCACCTTCTCCATCAGGTCCTGCAGAGCCATGGGTATTCAGATCCCAAATaGAGATTTCAGAATCGCTGG +
Preference number: 4 (lower is better)
Translates to: QAPVKNHHLLHQVLQSHGYSDPK*RFQNRW
Trigger: CCAGCGATTCTGAAATCTTCATTTGGGATCTGAATA...CCCATGGCTCTGCAGGACCTGATGGAGAAGGTGATGGTTCTTAACAGGAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTCAAGGAGTCATGTTCTaGGGGACCAGCTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: ILPQVLTECSIRESEELIQGVMF*GTSSSK
Trigger: CTTTGATGAGCTGGTCCCTCAGAACATGACTCCTTG...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp GGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAAACAAAAGACCCACATaGTGGGTCACAGCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: GEDILPQVLTECSIRESENKRPT*WVTAEV
Trigger: TACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTT...TTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR TCA 90 bp AGCGAGGGTGGGACTCCCATGCAAGTAGGCTCTTGGAAAGACTACTACATTCAATTTGGGAGGAATCCTTaGGACACCCAATTTGACCTA +
Preference number: 4 (lower is better)
Translates to: SEGGTPMQVGSWKDYYIQFGRNP*DTQFDL
Trigger: TAGGTCAAATTGGGTGTCTCAAGGATTCCTCCCAAA...TTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCATGGGAGTCCCACCCTCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTCCAGCTTGTGAAACCTaGTCAAGGCAGAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: ILPQVLTECSIRESEELIPACET*SRQKGL
Trigger: GAGTCCTTTCTGCCTTGAGCAGGTTTCACAAGCTGG...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR GCA 90 bp ATCCCTGGGGGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGAGCATCTTTTCACTTTaGAGTAAAGCTTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: IPGGEDILPQVLTECSIRSIFSL*SKACWL
Trigger: GAGCCAGCAAGCTTTACTGCAAAGTGAAAAGATGCT...CCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCCCAGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp GGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCATCCACCTGGGCATGCACTaGAAGGCCCTGCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GRESFLNMAPIPELGFIIHLGMH*KALLKA
Trigger: AGCTTTGAGCAGGGCCTTGCAGTGCATGCCCAGGTG...GATGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp AGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTGGGGAGAAGATATCCTaGCCCAGGTCCTTACAGAGT +
Preference number: 4 (lower is better)
Translates to: SAGRESFLNMAPIPELGFGEKIS*PRSLQS
Trigger: ACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCC...AAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTGGTCTATCCTGTAGGTaGCAGAAAACTGACATGGCC +
Preference number: 4 (lower is better)
Translates to: ILPQVLTECSIRESEELIGLSCR*QKTDMA
Trigger: GGCCATGTCAGTTTTCTGCCACCTACAGGATAGACC...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGGTTTGAGGCTGCTGTGACTTaGATCCCAGGGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: HPSNSFAQHRLEARRFWFEAAVT*IPGSLA
Trigger: TGCCAATGACCCTGGGATCCAAGTCACAGCAGCCTC...AAACCAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp ACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTTTAGGAATTTCATTCTaGAGTCTTGCTCTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: TGSSVGEAPQSCSSRTDALGISF*SLALRS
Trigger: TGACCTTAGAGCAAGACTCCAGAATGAAATTCCTAA...AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AATTTCATTCTGGAGTCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCCAGAGGCTTCCTTTGTaGTGTGTTTGGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: NFILESCSKVTCLMYSLIQRLPL*CVWRPG
Trigger: GCCAGGCCTCCAAACACACCACAAAGGAAGCCTCTG...GATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTCCAAGCAGGAGAGCCTaGCTTAGGAGTCCATCAATA +
Preference number: 4 (lower is better)
Translates to: KDSATNANPIGEGSPETCPSRRA*LRSPSI
Trigger: TATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGG...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp CATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGGTTTATGGGGGACAAAGCCTaGTGGCATTTTGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: HPSNSFAQHRLEARRFWFMGDKA*WHFAQH
Trigger: GTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCAT...AAACCAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp AGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTAAAGGGGGAGACTGTTaGCCCAAGACAGCAGAACCT +
Preference number: 4 (lower is better)
Translates to: SAGRESFLNMAPIPELGFKGGDC*PKTAEP
Trigger: AGGTTCTGCTGTCTTGGGCCAACAGTCTCCCCCTTT...AAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp AGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTAGGGGTGAAAACCCTTaGCCTTGGAGATGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SAGRESFLNMAPIPELGFRGENP*PWRWSW
Trigger: CCAACTCCATCTCCAAGGCCAAGGGTTTTCACCCCT...AAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp GCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACATTGTGGCAGAAAGGGCATAAATGTCTCTaGCAGCTTGTTCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: AHPITRVKVKAFFTLWQKGHKCL*QLVPLE
Trigger: CTCCAGAGGAACAAGCTGCCAGAGACATTTATGCCC...TTTCTGCCACAATGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTGCAAGAGAGGCTGCCTaGTTTAGACCAGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: ILPQVLTECSIRESEELIAREAA*FRPAAY
Trigger: ATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGC...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp GCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACATTGTGGCAGAAAGCAAGAGAGGCTGCCTaGTTTAGACCAGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: AHPITRVKVKAFFTLWQKAREAA*FRPAAY
Trigger: ATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGC...TTTCTGCCACAATGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp TGCATCAAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACAGCATCACATACCTaGCAGCAAGGAAAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: CIKDSATNANPIGEGSPETASHT*QQGKES
Trigger: CGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGT...CTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTTGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAAATCATTCCTTAATATaGCTCCAATTCCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPNHSLI*LQFQNW
Trigger: CCAGTTCTGGAATTGGAGCCATATTAAGGAATGATT...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp TGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTCTGCCTTCTTCACATTGTaGCAGAAACTAACATCCTTT +
Preference number: 4 (lower is better)
Translates to: CPPVPCEFPACHRAREISAFFTL*QKLTSF
Trigger: AAAGGATGTTAGTTTCTGCCACAATGTGAAGAAGGC...AGAAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp ACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTATGCAAGTAGGCTCTTaGAAAGACTACTACATTCAA +
Preference number: 4 (lower is better)
Translates to: TGSSVGEAPQSCSSRTDAMQVGS*KDYYIQ
Trigger: TTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCAT...AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp GATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGCCAATGCAAGTAGGCTCTTaGAAAGACTACTACATTCAA +
Preference number: 4 (lower is better)
Translates to: DHPLSTALTGWLCQDARPMQVGS*KDYYIQ
Trigger: TTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCAT...TGGCCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR TCA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTATGTGCCATTTGTGCTaGAGGAGGAATCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: AALEENHSLIWLQFQNWAMCHLC*RRNLAV
Trigger: AACAGCTAGATTCCTCCTTCAGCACAAATGGCACAT...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp GAATCACGGGAAGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTTATTCAGATCCCAAATaGAGATTTCAGAATCGCTGG +
Preference number: 4 (lower is better)
Translates to: ESREVDHPLSTALTGWLCYSDPK*RFQNRW
Trigger: CCAGCGATTCTGAAATCTTCATTTGGGATCTGAATA...ACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTCCCGTGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR TCA 90 bp ATTCAAAGTCTACAATGGAGTGTGGCACAAAATGGATCTATAGAAGAGAGAAAGATGCCAGGCCAGGCCTaGGCAGTGCATCCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: IQSLQWSVAQNGSIEERKMPGQA*AVHPVA
Trigger: AGCAACAGGATGCACTGCTCAGGCCTGGCCTGGCAT...CTTTCTCTCTTCTATAGATCCATTTTGTGCCACACTCCATTGTAGACTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp GGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAATTGAGACACCCAATTTaGCCTAGAAAGGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: GEDILPQVLTECSIRESELRHPI*PRKVRL
Trigger: GAGTCTGACCTTTCTAGGTCAAATTGGGTGTCTCAA...TTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp GGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCATCTTTCCAGAAGCCCACTaGCAAAGCTCCCCCAGACCA +
Preference number: 4 (lower is better)
Translates to: GRESFLNMAPIPELGFIIFPEAH*QSSPRP
Trigger: TGGTCTGGGGGAGCTTTGGCAGTGGGCTTCTGGAAA...GATGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR GCA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTCATCAAAGCACCAGCTaGTCTGTGTTGGTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: AALEENHSLIWLQFQNWAHQSTS*SVLVAY
Trigger: ATAAGCTACCAACACAGAGCAGCTGGTGCTTTGATG...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp CATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGGTTTCTGCTCAAAGCTTCCTaGATCCACACATCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: HPSNSFAQHRLEARRFWFLLKAS*IHTSGN
Trigger: GTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAG...AAACCAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGGATCCCAGGGTCATTaGCACATTCAAGTTATTCAG +
Preference number: 4 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPGSQGH*HIQVIQ
Trigger: CTGAATAACTTGAATGTGCCAATGACCCTGGGATCC...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp AGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCGGATCCCAGGGTCATTaGCACATTCAAGTTATTCAG +
Preference number: 4 (lower is better)
Translates to: SSAGRESFLNMAPIPELGGSQGH*HIQVIQ
Trigger: CTGAATAACTTGAATGTGCCAATGACCCTGGGATCC...GCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp CTAAGGTCACCTTCAGGAACTGCCACAGCATCTTTTCACTTTGCAGTAAAGCTTACACATAACAGAGTCTaGCTTCGGAGGTTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LRSPSGTATASFHFAVKLTHNRV*LRRLVP
Trigger: GGGCACTAACCTCCGAAGCCAGACTCTGTTATGTGT...AAGCTTTACTGCAAAGTGAAAAGATGCTGTGGCAGTTCCTGAAGGTGACCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469546.6
CDS-3UTR CCA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGATGTCTCTTTAGAGTaGAGGGTAGCTCCCACAACA +
Preference number: 4 (lower is better)
Translates to: KDSATNANPIGEGSPETCDVSLE*RVAPTT
Trigger: TGTTGTGGGAGCTACCCTCCACTCTAAAGAGACATC...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp CTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCACCTTGGAGATGGAGTTaGGACCTGGTGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LEENHSLIWLQFQNWALSPWRWS*DLVRRL
Trigger: CAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGG...TGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp ACCACATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGATCCTTTCAGGAAGATaGGCACTAGGGCAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: TTSFQFFCTTQARSEEILILSGR*ALGQRC
Trigger: GCACCTTTGCCCTAGTGCCCATCTTCCTGAAAGGAT...CAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp ATCCCTGGGGGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGCCTTCTTCACATTGTaGCAGAAACTAACATCCTTT +
Preference number: 4 (lower is better)
Translates to: IPGGEDILPQVLTECSIRAFFTL*QKLTSF
Trigger: AAAGGATGTTAGTTTCTGCCACAATGTGAAGAAGGC...CCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCCCAGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAGAGTGTGGCACAAAATaGATCTATAGAAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: HSAGLEPSLQHHIPGSKEECGTK*IYRREK
Trigger: TTTCTCTCTTCTATAGATCCATTTTGTGCCACACTC...TTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp GCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGAGTGTGGCACAAAATaGATCTATAGAAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ATNANPIGEGSPETCGGCECGTK*IYRREK
Trigger: TTTCTCTCTTCTATAGATCCATTTTGTGCCACACTC...GCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGTTCCTTCAGCTTCATaGTCTATCCTGTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: KDSATNANPIGEGSPETCVPSAS*SILCGR
Trigger: TCTTCCGCACAGGATAGACCATGAAGCTGAAGGAAC...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462434.5
CDS-3UTR TCA 90 bp ATTCAAAGTCTACAATGGAGTGTGGCACAAAATGGATCTATAGAAGAGAGAAAGGTCCTCTGGAGGCTGTaGCTTGGATCCCAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: IQSLQWSVAQNGSIEERKVLWRL*LGSQGH
Trigger: ATGACCCTGGGATCCAAGTCACAGCCTCCAGAGGAC...CTTTCTCTCTTCTATAGATCCATTTTGTGCCACACTCCATTGTAGACTTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462434.5
CDS-3UTR GCA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAACGGGAAATTTCTCTGTaGCTGAGTATGTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKREISL*LSMSVA
Trigger: TGCTACTGACATACTCAGGCACAGAGAAATTTCCCG...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp TCAAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATAGAAACAGAATCTGTTaGAGAAGTCCCCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SKTVPQMQIQSEKVALRHRNRIC*RSPLFC
Trigger: GCAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCT...ATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTAGACAGTGCCACAAATaGAAATCCAATCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ILPQVLTECSIRESEELIRQCHK*KSNRRR
Trigger: CCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCT...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp AGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTCGAAGCAGCTTTATTaGACCATTAAGTACATCACT +
Preference number: 4 (lower is better)
Translates to: SATNANPIGEGSPETCGGSKQLY*TIKYIT
Trigger: AGTGATGTACTTAATGGTGCAATAAAGCTGCTTCGA...GCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp CATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGGTTTGCGGGCTTCAGGAACTaGCACAGCATCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: HPSNSFAQHRLEARRFWFAGFRN*HSIFSL
Trigger: AAGTGAAAAGATGCTGTGGCAGTTCCTGAAGCCCGC...AAACCAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
CDS-3UTR CCA 90 bp ATTGCACCATTAAGTACATCACTGCATCAAAGACAGTGCCACAAATGCAAATCCAGATTTCAGAATCGCTaGCCCCTGAAGCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: IAPLSTSLHQRQCHKCKSRFQNR*PLKPGG
Trigger: ACCTCCTGGCTTCAGGGGCCAGCGATTCTGAAATCT...GGATTTGCATTTGTGGCACTGTCTTTGATGCAGTGATGTACTTAATGGTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp AATTTCATTCTGGAGTCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCGGGCATAAATGTCTCTaGCAGCTTGTTCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NFILESCSKVTCLMYSLIGHKCL*QLVPLE
Trigger: CTCCAGAGGAACAAGCTGCCAGAGACATTTATGCCC...GATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTGCCTTCTTCACATTGTaGCAGAAACTAACATCCTTT +
Preference number: 4 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPAFFTL*QKLTSF
Trigger: AAAGGATGTTAGTTTCTGCCACAATGTGAAGAAGGC...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp ATTGCACCATTAAGTACATCACTGCATCAAAGACAGTGCCACAAATGCAAATCCGATTCTGTGGTGACTTaGCTGATGAAGACTAGGCGG +
Preference number: 4 (lower is better)
Translates to: IAPLSTSLHQRQCHKCKSDSVVT*LMKTRR
Trigger: CCGCCTAGTCTTCATCAGTCAAGTCACCACAGAATC...GGATTTGCATTTGTGGCACTGTCTTTGATGCAGTGATGTACTTAATGGTGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR TCA 90 bp AAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACACATCAATATCTTTTGTaGTGGGGATCTCCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: KYYRAHPITRVKVKAFFTHQYLL*WGSPKE
Trigger: CTCCTTGGGAGATCCCCATCACAAAAGATATTGATG...TGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
CDS-3UTR GCA 90 bp AAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACACGGGAAATTTCTCTGTaGCTGAGTATGTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: KYYRAHPITRVKVKAFFTREISL*LSMSVA
Trigger: TGCTACTGACATACTCAGGCACAGAGAAATTTCCCG...TGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp ATTCAAAGTCTACAATGGAGTGTGGCACAAAATGGATCTATAGAAGAGAGAAAGCTCCAGACGCTGGGCTaGCTCTTCCAGCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: IQSLQWSVAQNGSIEERKLQTLG*LFQLPF
Trigger: AAAAGGAAGCTGGAAGAGGCAGCCCAGCGTCTGGAG...CTTTCTCTCTTCTATAGATCCATTTTGTGCCACACTCCATTGTAGACTTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCAGGTCTATCCTGTAGGTaGCAGAAAACTGACATGGCC +
Preference number: 4 (lower is better)
Translates to: LEENHSLIWLQFQNWALSGLSCR*QKTDMA
Trigger: GGCCATGTCAGTTTTCTGCCACCTACAGGATAGACC...TGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp TCAAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATCCCGAAGACAGGATGTaGGTCACATTGTATAGAATA +
Preference number: 4 (lower is better)
Translates to: SKTVPQMQIQSEKVALRHPEDRM*VTLYRI
Trigger: TATTCTATACAATGTGACCCACATCCTGTCTTCGGG...ATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000462434.5
CDS-3UTR CCA 90 bp GAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTAATGCAAGTAGGCTCTTaGAAAGACTACTACATTCAA +
Preference number: 4 (lower is better)
Translates to: EYVSSKASASLQFFRLQVMQVGS*KDYYIQ
Trigger: TTGAATGTAGTAGTCTTTCCAAGAGCCTACTTGCAT...TACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR CAA 72 bp CCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACATaGTGGCAGAAACTAACATCCTTTCAGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: PITRVKVKAFFT*WQKLTSFQEDG
Trigger: CCCATCTTCCTGAAAGGATGTTAGTTTCTGCCACAATGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR TCA 90 bp AGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTTCCCAATCTGTAAGATaGTGTCTCTTTAGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: SAGRESFLNMAPIPELGFSQSVR*CLFRVE
Trigger: CTCCACTCTAAAGAGACATCATCTTACAGATTGGGA...AAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp AAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACAAGCATCTTTTCACTTTaGAGTAAAGCTTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KYYRAHPITRVKVKAFFTSIFSL*SKACWL
Trigger: GAGCCAGCAAGCTTTACTGCAAAGTGAAAAGATGCT...TGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp ACCACATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGTCCTTCCAATTCTTTTaGACAACACAGGCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: TTSFQFFCTTQARSEEILSFQFF*TTQARS
Trigger: GCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGA...CAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR GCA 90 bp ATTCAAAGTCTACAATGGAGTGTGGCACAAAATGGATCTATAGAAGAGAGAAAGGGGGAGAAGATATCCTaGCCCAGGTCCTTACAGAGT +
Preference number: 4 (lower is better)
Translates to: IQSLQWSVAQNGSIEERKGEKIS*PRSLQS
Trigger: ACTCTGTAAGGACCTGGGGCAGGATATCTTCTCCCC...CTTTCTCTCTTCTATAGATCCATTTTGTGCCACACTCCATTGTAGACTTTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp CTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCAGGGCAGATGTTCCTGTaGCCAGATACAAAGGGTATT +
Preference number: 4 (lower is better)
Translates to: LEENHSLIWLQFQNWALSGQMFL*PDTKGI
Trigger: AATACCCTTTGTATCTGGCCACAGGAACATCTGCCC...TGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CCA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCATTAGGAATTTCATTCTaGAGTCTTGCTCTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSLGISF*SLALRS
Trigger: TGACCTTAGAGCAAGACTCCAGAATGAAATTCCTAA...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp CATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGGTTTTTTTGGTTTTCTTCTTaGCCAAGTAGCGCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: HPSNSFAQHRLEARRFWFFWFSS*PSSAPV
Trigger: CACAGGAGCGCTACTTGGCCAAGAAGAAAACCAAAA...AAACCAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CCA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCAAATCATTCCTTAATATaGCTCCAATTCCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSNHSLI*LQFQNW
Trigger: CCAGTTCTGGAATTGGAGCCATATTAAGGAATGATT...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
3UTR CAA 72 bp CTTTCTTCCTTCAGATCTCTCACTTGCTCATTTCCTTaGATAGGTATAGTACTCCTCCTTCAGGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: LSSFRSLTCSFP*IGIVLLLQELP
Trigger: TGGCAGTTCCTGAAGGAGGAGTACTATACCTATCAAAGGAAATGAGCAAGTGAGAGATCTGAAGGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR GCA 90 bp CTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCACATCAAAGCACCAGCTaGTCTGTGTTGGTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: LEENHSLIWLQFQNWALSHQSTS*SVLVAY
Trigger: ATAAGCTACCAACACAGAGCAGCTGGTGCTTTGATG...TGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR GCA 90 bp CTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCAGTCACCTTCAGGAACTaGCACAGCATCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: LEENHSLIWLQFQNWALSVTFRN*HSIFSL
Trigger: AAGTGAAAAGATGCTGTGGCAGTTCCTGAAGGTGAC...TGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000469546.6
CDS-3UTR CCA 90 bp TCAAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATTTAGGAATTTCATTCTaGAGTCTTGCTCTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SKTVPQMQIQSEKVALRHLGISF*SLALRS
Trigger: TGACCTTAGAGCAAGACTCCAGAATGAAATTCCTAA...ATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CCA 90 bp GGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCATCAATCATTCCTTAATATaGCTCCAATTCCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: GRESFLNMAPIPELGFIINHSLI*LQFQNW
Trigger: CCAGTTCTGGAATTGGAGCCATATTAAGGAATGATT...GATGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp TGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAGCAAGCCTGGTGGCATTTaGCCCAGCACTCCACCAGCC +
Preference number: 5 (lower is better)
Translates to: CRAMGDKAWWHFAQHSTSKPGGI*PSTPPA
Trigger: GGCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTT...GCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGGCCTTGGAGATGGAGTaGGGACCTGGTGAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: VALQHLQGRGGKAQVPQLALEME*GPGEKA
Trigger: AGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGC...CAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCGGGAGAGGCTGGCCTTaGCTGAAGGAAGAGGAGATC +
Preference number: 5 (lower is better)
Translates to: QVLQSHGGQSLVAFCPALGRGWP*LKEEEI
Trigger: GATCTCCTCTTCCTTCAGCAAAGGCCAGCCTCTCCC...GAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCACCTGGGAGAGGCTGGCCTTaGCTGAAGGAAGAGGAGATC +
Preference number: 5 (lower is better)
Translates to: QPGSMTLTRSPCCGSPAPGRGWP*LKEEEI
Trigger: GATCTCCTCTTCCTTCAGCAAAGGCCAGCCTCTCCC...AGGTGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp TGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAGCTCTGGAGGCTGTGACTaGGATCCCAGGGTCATTGGC +
Preference number: 5 (lower is better)
Translates to: CRAMGDKAWWHFAQHSTSSGGCD*DPRVIG
Trigger: GCCAATGACCCTGGGATCCAAGTCACAGCCTCCAGA...GCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
CDS TCA 90 bp CACTCCCAGCCACCCTCCACCCAACAGGGCCCTAGCCCTCTGACTTaGGGAAAGACTCCCAAAGTAGTGAGAGGAGCAGGGGAGGCAATA +
Preference number: 5 (lower is better)
Translates to: HSQPPSTQQGPSPLT*GKTPKVVRGAGEAI
Trigger: TATTGCCTCCCCTGCTCCTCTCACTACTTTGGGAGTCTTTCCTCAAGTCAGAGGGCTAGGGCCCTGTTGGGTGGAGGGTGGCTGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492667.5
CDS-3UTR CAA 90 bp CTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGGAGGCTGCTGTGACTaGGATCCCAGGGTCATTGGC +
Preference number: 5 (lower is better)
Translates to: LQGPAQSFLHPHIGQPHGGGCCD*DPRVIG
Trigger: GCCAATGACCCTGGGATCCAAGTCACAGCAGCCTCC...TCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp GTGGCTCTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAAACTGATCCAGCCGTaGAAGGAGGCAGCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: VALQHLQGRGGKAQVPQLKLIQP*KEAAEN
Trigger: GTTCTCTGCTGCCTCCTTCAACGGCTGGATCAGTTT...CAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCAGGTATCAGTGGTGCTaGTGCCACTTGCTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: PSGPAEPWGTKPGGILPSRYQWC*CHLLWH
Trigger: GTGCCAGAGCAAGTGGCACAAGCACCACTGATACCT...GCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS TCA 90 bp CTTGTCACCTGCAGGCTGAGTTCTCCTGGAACTCCTGGGGGAGCATaGCTCACACTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGT +
Preference number: 5 (lower is better)
Translates to: LVTCRLSSPGTPGGA*LTLETGGCEGRIPC
Trigger: ACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTCCCCCAGGAGTTCCAGGAGAACTCAGCCTGCAGGTGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000485800.6
ENST00000492667.5
CDS CCA 90 bp TCTAGCTGTTGGGCAGATGTTCCTGTGGCCAGATACAAAGGGTATTaGCTGGCTGGGCTCCATGCCTGGACAGCTGGCCGCTCAAGTTCC +
Preference number: 5 (lower is better)
Translates to: SSCWADVPVARYKGY*LAGLHAWTAGRSSS
Trigger: GGAACTTGAGCGGCCAGCTGTCCAGGCATGGAGCCCAGCCAGCCAATACCCTTTGTATCTGGCCACAGGAACATCTGCCCAACAGCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CAA 90 bp TTCCTGCATCCACACATCGGGCAACCTCATGGAGCCCAGCCACGACATGAGGTGCCTGAAGCCAGGAGGTaGCCCTGGAAAGGATTCAAG +
Preference number: 5 (lower is better)
Translates to: FLHPHIGQPHGAQPRHEVPEARR*PWKGFK
Trigger: CTTGAATCCTTTCCAGGGCAACCTCCTGGCTTCAGG...CACCTCATGTCGTGGCTGGGCTCCATGAGGTTGCCCGATGTGTGGATGCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CAA 90 bp CTCCAGCACCTTCAAGGGCGAGGAGGCAAAGCGCAAGTCCCACAGCTGAATCACCAGAATGTGTTGGGCTaGCCGGTTCCAAGACAGTGC +
Preference number: 5 (lower is better)
Translates to: LQHLQGRGGKAQVPQLNHQNVLG*PVPRQC
Trigger: GCACTGTCTTGGAACCGGCAAGCCCAACACATTCTG...GTGATTCAGCTGTGGGACTTGCGCTTTGCCTCCTCGCCCTTGAAGGTGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CAA 90 bp CTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTCAGGGGTGAGGCTCAAGCAGAGGCTTCCTTaGTGGTGTGTTTGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: LETGGCEGRIPCSSGVRLKQRLP*WCVWRP
Trigger: AGGCCTCCAAACACACCACAAAGGAAGCCTCTGCTT...GAGCCTCACCCCTGAGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGGCCTTGGAGATGGAGTaGGGACCTGGTGAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: EQQSALPQTLGYREIRTWALEME*GPGEKA
Trigger: AGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGC...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTCATGGAGCCTTGGAGATGGAGTaGGGACCTGGTGAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: LQGPAQSFLHPHIGQPHGALEME*GPGEKA
Trigger: AGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGC...TCCATGAGGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTAGACAGGGAGCAGCGTaGGAGAAGCGCCTCAAAGCT +
Preference number: 5 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPRQGAA*EKRLKA
Trigger: AGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTCT...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp CTCCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAAGGCACTCAGCTGGTTaGGAGCCAAGCCTACAGCAT +
Preference number: 5 (lower is better)
Translates to: LHQVLQSHGGQSLVAFCPRHSAG*EPSLQH
Trigger: ATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCT...TGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAGGACCCCCAACCCTaGAGGAGCAGCGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: ALSWFGAKPTASHTWQQGKDPQP*RSSAGR
Trigger: TCTTCCAGCGCTGCTCCTCAAGGGTTGGGGGTCCTT...TCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS TCA 90 bp GGATTCAAGTCGAGGGCTCTGACAGCCCCCGTGTGCTTCTGTTTCTaGGCAATCACAGGCTCCTTCCCCGAAGACAGGATGTGGGTCACA +
Preference number: 5 (lower is better)
Translates to: GFKSRALTAPVCFCF*AITGSFPEDRMWVT
Trigger: TGTGACCCACATCCTGTCTTCGGGGAAGGAGCCTGTGATTGCTCAGAAACAGAAGCACACGGGGGCTGTCAGAGCCCTCGACTTGAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS CCA 90 bp TTGGGCAGATGTTCCTGTGGCCAGATACAAAGGGTATTGGCTGGCTaGGCTCCATGCCTGGACAGCTGGCCGCTCAAGTTCCTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: LGRCSCGQIQRVLAG*APCLDSWPLKFLQL
Trigger: AAGCTGAAGGAACTTGAGCGGCCAGCTGTCCAGGCATGGAGCCCAGCCAGCCAATACCCTTTGTATCTGGCCACAGGAACATCTGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CAA 90 bp CCATCAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCAGAAGACAGAATGTGTaGGGCTTGCCGGTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: PSGPAEPWGTKPGGILPSRRQNV*GLPVPR
Trigger: TCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCT...GCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp TCCACGGCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAACCAGCTGCTCTGTGTaGGTAGCTTATATACCACCT +
Preference number: 5 (lower is better)
Translates to: STAGPSSPSRRAWLRSPSTSCSV*VAYIPP
Trigger: AGGTGGTATATAAGCTACCAACACAGAGCAGCTGGT...TGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGCCGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAAAGCCTGGTGGCATTTaGCCCAGCACTCCACCAGCC +
Preference number: 5 (lower is better)
Translates to: CSKGEQQSALPQTLGYREKPGGI*PSTPPA
Trigger: GGCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTT...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GCAGAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCAAGCCTGGTGGCATTTaGCCCAGCACTCCACCAGCC +
Preference number: 5 (lower is better)
Translates to: AEDRMCWACRFQDSALMSKPGGI*PSTPPA
Trigger: GGCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTT...GGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp TTCTATGCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAAGACAGGGAGCAGCGTaGGAGAAGCGCCTCAAAGCT +
Preference number: 5 (lower is better)
Translates to: FYALPPGLRVSWTDPRRPRQGAA*EKRLKA
Trigger: AGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTCT...TGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGCATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCAGCCTGGCTCCTGAAGCCAGGAGGTaGCCCTGCTCAAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: QDLAVLSTSEQQLSISLAPEARR*PCSRQK
Trigger: TTTCTGCCTTGAGCAGGGCAACCTCCTGGCTTCAGG...AGCCAGGCTGATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS TCA 90 bp GGTTTCCCAAGGGAGGGGAATACATTGTCCTTGTCACCTGCAGGCTaGGTTCTCCTGGAACTCCTGGGGGAGCATGACTCACACTGGAGA +
Preference number: 5 (lower is better)
Translates to: GFPREGNTLSLSPAG*VLLELLGEHDSHWR
Trigger: TCTCCAGTGTGAGTCATGCTCCCCCAGGAGTTCCAGGAGAACTCAGCCTGCAGGTGACAAGGACAATGTATTCCCCTCCCTTGGGAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485800.6
ENST00000492667.5
CDS-3UTR CAA 90 bp GAGGACAGCCTTCAGGATAGGCATGAAGCTGGACACCTCGCTGAAGCTGCTACACAGATACAAAGGGTATaGGCTGGCTGGGCTCCATGC +
Preference number: 5 (lower is better)
Translates to: EDSLQDRHEAGHLAEAATQIQRV*AGWAPC
Trigger: GCATGGAGCCCAGCCAGCCAATACCCTTTGTATCTG...TGTAGCAGCTTCAGCGAGGTGTCCAGCTTCATGCCTATCCTGAAGGCTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGGGAAAAGGAGGCTGCTGTGACTaGGATCCCAGGGTCATTGGC +
Preference number: 5 (lower is better)
Translates to: GAKPTASHTWQQGKESGKGGCCD*DPRVIG
Trigger: GCCAATGACCCTGGGATCCAAGTCACAGCAGCCTCC...TTTTCCCGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp TTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATGGGAGGCTGCTGTGACTaGGATCCCAGGGTCATTGGC +
Preference number: 5 (lower is better)
Translates to: LEMELGPGEKAGIPICKMGGCCD*DPRVIG
Trigger: GCCAATGACCCTGGGATCCAAGTCACAGCAGCCTCC...CATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCCAGAATGTGTTGGGCTaGCCGGTTCCAAGACAGTGC +
Preference number: 5 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGQNVLG*PVPRQC
Trigger: GCACTGTCTTGGAACCGGCAAGCCCAACACATTCTG...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp ACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCAGAATGTGTTGGGCTaGCCGGTTCCAAGACAGTGC +
Preference number: 5 (lower is better)
Translates to: TGSSVGEAPQSCSSRTDAQNVLG*PVPRQC
Trigger: GCACTGTCTTGGAACCGGCAAGCCCAACACATTCTG...AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp TCCCAGCAAAGGGGTCCCACGGTCCCTGAAATACTACAGGGCCCATCCAATAACAGGTATCAGTGGTGCTaGTGCCACTTGCTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: SQQRGPTVPEILQGPSNNRYQWC*CHLLWH
Trigger: GTGCCAGAGCAAGTGGCACAAGCACCACTGATACCT...GTTATTGGATGGGCCCTGTAGTATTTCAGGGACCGTGGGACCCCTTTGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp GAGCATGACTCACACTGGAGACAGGGGGCTGTGAGGGAAGAATCCCTTGTAGCTAGGTATCAGTGGTGCTaGTGCCACTTGCTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: EHDSHWRQGAVREESLVARYQWC*CHLLWH
Trigger: GTGCCAGAGCAAGTGGCACAAGCACCACTGATACCT...AGCTACAAGGGATTCTTCCCTCACAGCCCCCTGTCTCCAGTGTGAGTCATGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGAAGCCTGGTGGCATTTaGCCCAGCACTCCACCAGCC +
Preference number: 5 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRKPGGI*PSTPPA
Trigger: GGCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTT...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGCCAATGAGGACCCCGCAGTaGCTCCAAGCTCCTGTTAAG +
Preference number: 5 (lower is better)
Translates to: DHPLSTALTGWLCQDARPMRTPQ*LQAPVK
Trigger: CTTAACAGGAGCTTGGAGCAACTGCGGGGTCCTCAT...TGGCCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGAGGGCCTTGGAGATGGAGTaGGGACCTGGTGAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: QMQIQSEKVALRHVVAARALEME*GPGEKA
Trigger: AGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGC...CCTCGCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp GCAGGCACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAATGTCTCTGGCAGCTaGTTCCTCTGGAGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: AGTQLVWSQAYSITYLAANVSGS*FLWRFP
Trigger: GGGAAACCTCCAGAGGAACAAGCTGCCAGAGACATT...TGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTGCTCCTAATGTCTCTGGCAGCTaGTTCCTCTGGAGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: QHRWSQGQFPIGCGSPAPNVSGS*FLWRFP
Trigger: GGGAAACCTCCAGAGGAACAAGCTGCCAGAGACATT...AGGAGCAGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAAGACAGGGAGCAGCGTaGGAGAAGCGCCTCAAAGCT +
Preference number: 5 (lower is better)
Translates to: CSKGEQQSALPQTLGYRERQGAA*EKRLKA
Trigger: AGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTCT...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS CCA 90 bp GGAGGCAATAACCCAGAAGAGGGATCCATGGAAGGAAGACTGACCTaGGTGAGGAGTCAAGATGCCAGTGGTTGGGAGGACACTAGAGCA +
Preference number: 5 (lower is better)
Translates to: GGNNPEEGSMEGRLT*VRSQDASGWEDTRA
Trigger: TGCTCTAGTGTCCTCCCAACCACTGGCATCTTGACTCCTCACCCAGGTCAGTCTTCCTTCCATGGATCCCTCTTCTGGGTTATTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492667.5
CDS CCA 90 bp CTCCTACCCTGGCAGCATGGAAGGGATAAGGGAAGACTTAAGTTCTaGGGCCCAGTCCAGGCAAGATGCACGTATTTTGTGGGGAACCCA +
Preference number: 5 (lower is better)
Translates to: LLPWQHGRDKGRLKF*GPVQARCTYFVGNP
Trigger: TGGGTTCCCCACAAAATACGTGCATCTTGCCTGGACTGGGCCCCAGAACTTAAGTCTTCCCTTATCCCTTCCATGCTGCCAGGGTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485800.6
CDS-3UTR CAA 90 bp AGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGCAGATACAAAGGGTATaGGCTGGCTGGGCTCCATGC +
Preference number: 5 (lower is better)
Translates to: SRSSSEHSTNWVAMSGCQQIQRV*AGWAPC
Trigger: GCATGGAGCCCAGCCAGCCAATACCCTTTGTATCTG...CTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CAA 90 bp CCACACAACTGCCTTGCCACTGGGGTGAGCAGAAGACAGAATGTGTTGGGCTTGAAACTGATCCAGCCGTaGAAGGAGGCAGCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: PHNCLATGVSRRQNVLGLKLIQP*KEAAEN
Trigger: GTTCTCTGCTGCCTCCTTCAACGGCTGGATCAGTTT...CAAGCCCAACACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTGGGAGAGGCTGGCCTTaGCTGAAGGAAGAGGAGATC +
Preference number: 5 (lower is better)
Translates to: AGLEPSLQHHIPGSKEKSGRGWP*LKEEEI
Trigger: GATCTCCTCTTCCTTCAGCAAAGGCCAGCCTCTCCC...ACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGGGAAAAGGGAGAGGCTGGCCTTaGCTGAAGGAAGAGGAGATC +
Preference number: 5 (lower is better)
Translates to: GAKPTASHTWQQGKESGKGRGWP*LKEEEI
Trigger: GATCTCCTCTTCCTTCAGCAAAGGCCAGCCTCTCCC...TTTTCCCGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp TTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTCTGGGGGCAGCTCTGTTGTCTGTCACTGTaGAGGTCATTTCCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LEKRLKAALQGLMLWGQLCCLSL*RSFPLG
Trigger: GCCCAAGGGAAATGACCTCAACAGTGACAGACAACA...GAGCTGCCCCCAGAGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GTTCCGGCACAAGATCTGGCTGTCCTTAGCACTAGTGAGCAGCAGCTCAGCATCAAGCAGAGGCTTCCTTaGTGGTGTGTTTGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: VPAQDLAVLSTSEQQLSIKQRLP*WCVWRP
Trigger: AGGCCTCCAAACACACCACAAAGGAAGCCTCTGCTT...GATGCTGAGCTGCTGCTCACTAGTGCTAAGGACAGCCAGATCTTGTGCCGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GCTGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTGTAGCGCTCCTGTGTTaGCTTCAGCAGATCTGTACC +
Preference number: 5 (lower is better)
Translates to: AALLFHASSQHVTELGKFVALLC*LQQICT
Trigger: GGTACAGATCTGCTGAAGCAAACACAGGAGCGCTAC...AAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGAAAGGGGGAGACTGTaGGCCCAAGACAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: LVWSQAYSITYLAARKRVERGRL*AQDSRT
Trigger: GGTTCTGCTGTCTTGGGCCAACAGTCTCCCCCTTTC...GACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp ACAGGGAGCAGCGTTGGAGAAGCGCCTCAAAGCTGCTCTTCAAGGACTGATGCTAATGTCTCTGGCAGCTaGTTCCTCTGGAGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: TGSSVGEAPQSCSSRTDANVSGS*FLWRFP
Trigger: GGGAAACCTCCAGAGGAACAAGCTGCCAGAGACATT...AGCATCAGTCCTTGAAGAGCAGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAAGACAGGGAGCAGCGTaGGAGAAGCGCCTCAAAGCT +
Preference number: 5 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKRQGAA*EKRLKA
Trigger: AGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTCT...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp TGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCCACCAGCAAGAAACAGAATCTGTaGCAGAAGTCCCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: CRAMGDKAWWHFAQHSTSKKQNL*QKSPLL
Trigger: CAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCTT...GCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CAGGTCCTGCAGAGCCATGGGGGACAAAGCCTGGTGGCATTTTGCCCAGCACTCAAGAAACAGAATCTGTaGCAGAAGTCCCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: QVLQSHGGQSLVAFCPALKKQNL*QKSPLL
Trigger: CAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCTT...GAGTGCTGGGCAAAATGCCACCAGGCTTTGTCCCCCATGGCTCTGCAGGACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAAGGCACTCAGCTGGTTaGGAGCCAAGCCTACAGCAT +
Preference number: 5 (lower is better)
Translates to: CSKGEQQSALPQTLGYRERHSAG*EPSLQH
Trigger: ATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCT...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAGGCACTCAGCTGGTTaGGAGCCAAGCCTACAGCAT +
Preference number: 5 (lower is better)
Translates to: HSAGLEPSLQHHIPGSKERHSAG*EPSLQH
Trigger: ATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCT...TTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp AGGCTCCAACATAGGTGGAGTCAAGGGCAGTTCCCCATAGGCTGTGGTTCCCCTCCAAAGTTTCCTCTCTaGGTTCTGCTCAGCACCCAT +
Preference number: 5 (lower is better)
Translates to: RLQHRWSQGQFPIGCGSPPKFPL*VLLSTH
Trigger: ATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGG...AGGGGAACCACAGCCTATGGGGAACTGCCCTTGACTCCACCTATGTTGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGAAGGACCCCCAACCCTaGAGGAGCAGCGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: LGYREIRTWKYQVRGREKKDPQP*RSSAGR
Trigger: TCTTCCAGCGCTGCTCCTCAAGGGTTGGGGGTCCTT...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp TCCATGAGTTGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTTCTTTCCAGGAATCTaGAGGTCCAGGCCTTACCCC +
Preference number: 5 (lower is better)
Translates to: SMSCSKGEQQSALPQTLGFFPGI*RSRPYP
Trigger: GGGGTAAGGCCTGGACCTCAAGATTCCTGGAAAGAA...GCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACAACTCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000482456.6
CDS-3UTR CAA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAACCTGAAGCCAGGAGGTaGCCCTGCTCAAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKPEARR*PCSRQK
Trigger: TTTCTGCCTTGAGCAGGGCAACCTCCTGGCTTCAGG...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS TCA 90 bp GGGCAAGCTGTCCTTCTCATGGCTTCCCTAAGGACTAGTCCCCAGTaGCTCACAGTCACACTGTTCCCATTACAGCAGAGTTGGGGAGAT +
Preference number: 5 (lower is better)
Translates to: GQAVLLMASLRTSPQ*LTVTLFPLQQSWGD
Trigger: ATCTCCCCAACTCTGCTGTAATGGGAACAGTGTGACTGTGAGTCACTGGGGACTAGTCCTTAGGGAAGCCATGAGAAGGACAGCTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485800.6
ENST00000492667.5
CDS GCA 90 bp CTACTCTTCCTCCCTCTTTGCTGGGCCCAATGCCCTACCCAACCCTaGGAAAGCTCTACTGTGATAAACAGCACTCCCATCCCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: LLFLPLCWAQCPTQP*ESSTVINSTPIPSC
Trigger: ACAAGAAGGGATGGGAGTGCTGTTTATCACAGTAGAGCTTTCGCAGGGTTGGGTAGGGCATTGGGCCCAGCAAAGAGGGAGGAAGAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484848.5
CDS CCA 90 bp TTGTGGGGAACCCAGGTCAGTGACACCTATGGGAAGAAAAGACACTaGGCTTCCTTTGGCCATGGTGATGGTGGAAGTGTAGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: LWGTQVSDTYGKKRH*ASFGHGDGGSVGGS
Trigger: ACTGCCTCCTACACTTCCACCATCACCATGGCCAAAGGAAGCCCAGTGTCTTTTCTTCCCATAGGTGTCACTGACCTGGGTTCCCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485800.6
CDS-3UTR CAA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAACAGATACAAAGGGTATaGGCTGGCTGGGCTCCATGC +
Preference number: 5 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKQIQRV*AGWAPC
Trigger: GCATGGAGCCCAGCCAGCCAATACCCTTTGTATCTG...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp AGTGGCCTCCTAGCAAGAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGAAGAATAAGCATGCCATaGTCCCCGCCGCCAACAATA +
Preference number: 5 (lower is better)
Translates to: SGLLAREAAWFRPAAYERRISMP*SPPPTI
Trigger: TATTGTTGGCGGCGGGGACAATGGCATGCTTATTCT...TCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTCTTGCTAGGAGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CAA 90 bp CTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCCCTGAAGCCAGGAGGTaGCCCTGGAAAGGATTCAAG +
Preference number: 5 (lower is better)
Translates to: LVWSQAYSITYLAARKRVPEARR*PWKGFK
Trigger: CTTGAATCCTTTCCAGGGCAACCTCCTGGCTTCAGG...GACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CAA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCCCTGAAGCCAGGAGGTaGCCCTGGAAAGGATTCAAG +
Preference number: 5 (lower is better)
Translates to: APVSQPKTASSKRQFIPFPEARR*PWKGFK
Trigger: CTTGAATCCTTTCCAGGGCAACCTCCTGGCTTCAGG...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CAA 90 bp CATCAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCATGGATCCCAGGGTCATaGGCACATTCAAGTTATTCA +
Preference number: 5 (lower is better)
Translates to: HQPGSMTLTRSPCCGSPAWIPGS*AHSSYS
Trigger: TGAATAACTTGAATGTGCCAATGACCCTGGGATCCA...TGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CAA 90 bp GCATGCACTGCAAGGCCCTGCTCAAAGCTTCCTGCATCCACACATCGGGCAACCTGGATCCCAGGGTCATaGGCACATTCAAGTTATTCA +
Preference number: 5 (lower is better)
Translates to: ACTARPCSKLPASTHRATWIPGS*AHSSYS
Trigger: TGAATAACTTGAATGTGCCAATGACCCTGGGATCCA...GGTTGCCCGATGTGTGGATGCAGGAAGCTTTGAGCAGGGCCTTGCAGTGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp AAGGAGTCATGTTCTGAGGGACCAGCTCATCAAAGAAGGCTGAGGAAGCAGAGGCAGAATGTGTTGGGCTaGCCGGTTCCAAGACAGTGC +
Preference number: 5 (lower is better)
Translates to: KESCSEGPAHQRRLRKQRQNVLG*PVPRQC
Trigger: GCACTGTCTTGGAACCGGCAAGCCCAACACATTCTG...CCTCTGCTTCCTCAGCCTTCTTTGATGAGCTGGTCCCTCAGAACATGACTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGCAGAATGTGTTGGGCTaGCCGGTTCCAAGACAGTGC +
Preference number: 5 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRQNVLG*PVPRQC
Trigger: GCACTGTCTTGGAACCGGCAAGCCCAACACATTCTG...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGAGAAGACAGAATGTGTaGGGCTTGCCGGTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: VDHPLSTALTGWLCQDARRRQNV*GLPVPR
Trigger: TCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCT...CCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS-3UTR CAA 90 bp TCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGGTATCAGTGGTGCTaGTGCCACTTGCTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: SAGLEPSLQHHIPGSKEKRYQWC*CHLLWH
Trigger: GTGCCAGAGCAAGTGGCACAAGCACCACTGATACCT...CTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAGGATGCCAGGCCATGTTGTCTGTCACTGTaGAGGTCATTTCCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: DHPLSTALTGWLCQDARPCCLSL*RSFPLG
Trigger: GCCCAAGGGAAATGACCTCAACAGTGACAGACAACA...TGGCCTGGCATCCTGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GAGAGGCTGCCTGGTTTAGACCAGCAGCTTATGAGCGATGATGAGGACAGCCTTAAGCAGAGGCTTCCTTaGTGGTGTGTTTGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: ERLPGLDQQLMSDDEDSLKQRLP*WCVWRP
Trigger: AGGCCTCCAAACACACCACAAAGGAAGCCTCTGCTT...AAGGCTGTCCTCATCATCGCTCATAAGCTGCTGGTCTAAACCAGGCAGCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGAGGGTAGCGCTCCTGTGTTaGCTTCAGCAGATCTGTACC +
Preference number: 5 (lower is better)
Translates to: QMQIQSEKVALRHVVAARVALLC*LQQICT
Trigger: GGTACAGATCTGCTGAAGCAAACACAGGAGCGCTAC...CCTCGCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp TTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATGATGAGGACCCCGCAGTaGCTCCAAGCTCCTGTTAAG +
Preference number: 5 (lower is better)
Translates to: LEMELGPGEKAGIPICKMMRTPQ*LQAPVK
Trigger: CTTAACAGGAGCTTGGAGCAACTGCGGGGTCCTCAT...CATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp ATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACACAAGACAGGGAGCAGCGTaGGAGAAGCGCCTCAAAGCT +
Preference number: 5 (lower is better)
Translates to: MSVAKPVPLSSSSGYRYTRQGAA*EKRLKA
Trigger: AGCTTTGAGGCGCTTCTCCAACGCTGCTCCCTGTCT...TGTGTACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAATACGGACCTGGTTGTCTTTAAGTCAGTaGCAGACAGGGAGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: EQQSALPQTLGYREIRTWLSLSQ*QTGSSV
Trigger: AACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAA...CCAGGTCCGTATTTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GCCGGACCCAGTTCCCCAAGCAGGAGAGCCTGGCTTAGGAGTCCATCAATATCTTTGTCTTTAAGTCAGTaGCAGACAGGGAGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: AGPSSPSRRAWLRSPSISLSLSQ*QTGSSV
Trigger: AACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAA...AGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GAAGACAGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTAGGCACTCAGCTGGTTaGGAGCCAAGCCTACAGCAT +
Preference number: 5 (lower is better)
Translates to: EDRMCWACRFQDSALMSSRHSAG*EPSLQH
Trigger: ATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCT...AGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp AGAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTGGAGGCCCAAAGTTTCCTCTCTaGGTTCTGCTCAGCACCCAT +
Preference number: 5 (lower is better)
Translates to: RMCWACRFQDSALMSSGGPKFPL*VLLSTH
Trigger: ATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGG...GCCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GGGCCCTGGTCTCCCAATCTCCAATATCTCCGCTTCTCAAGCCATATGTCTCTCTTCTTTCCAGGAATCTaGAGGTCCAGGCCTTACCCC +
Preference number: 5 (lower is better)
Translates to: GPWSPNLQYLRFSSHMSLFFPGI*RSRPYP
Trigger: GGGGTAAGGCCTGGACCTCAAGATTCCTGGAAAGAA...GAGAGACATATGGCTTGAGAAGCGGAGATATTGGAGATTGGGAGACCAGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CAA 90 bp CACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAATTCTTTCCAGGAATCTaGAGGTCCAGGCCTTACCCC +
Preference number: 5 (lower is better)
Translates to: HSAGLEPSLQHHIPGSKEFFPGI*RSRPYP
Trigger: GGGGTAAGGCCTGGACCTCAAGATTCCTGGAAAGAA...TTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000482456.6
CDS TCA 90 bp ACGAGGTCTTACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATaGTGTCTCTTTAGAGTGGAGGGTAGCTCCCACAACAATCCGGGG +
Preference number: 5 (lower is better)
Translates to: TRSYLVRRLGSQSVR*CLFRVEGSSHNNPG
Trigger: CCCCGGATTGTTGTGGGAGCTACCCTCCACTCTAAAGAGACATCATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTAAGACCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484848.5
CDS GCA 90 bp GAAGCCTGGGACCACACTTACCACAGAGCTCGGGAAATTTCTCTGTaGCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: EAWDHTYHRAREISL*LSMSVAKPVPLSSS
Trigger: AGAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATTTCCCGAGCTCTGTGGTAAGTGTGGTCCCAGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498298.1
CDS-3UTR CAA 90 bp CACTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAGAATAAGCATGCCATaGTCCCCGCCGCCAACAATA +
Preference number: 5 (lower is better)
Translates to: HSAGLEPSLQHHIPGSKERISMP*SPPPTI
Trigger: TATTGTTGGCGGCGGGGACAATGGCATGCTTATTCT...TTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CAA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAAAGAATAAGCATGCCATaGTCCCCGCCGCCAACAATA +
Preference number: 5 (lower is better)
Translates to: CSKGEQQSALPQTLGYRERISMP*SPPPTI
Trigger: TATTGTTGGCGGCGGGGACAATGGCATGCTTATTCT...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CAA 90 bp GGTGAAAACCCTTGGCCTTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATGGATCCCAGGGTCATaGGCACATTCAAGTTATTCA +
Preference number: 5 (lower is better)
Translates to: GENPWPWRWSWDLVRRLGWIPGS*AHSSYS
Trigger: TGAATAACTTGAATGTGCCAATGACCCTGGGATCCA...TCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAAGGCCAAGGGTTTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTACAGAATGTGTTGGGCTaGCCGGTTCCAAGACAGTGC +
Preference number: 5 (lower is better)
Translates to: EYVSSKASASLQFFRLQVQNVLG*PVPRQC
Trigger: GCACTGTCTTGGAACCGGCAAGCCCAACACATTCTG...TACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp TGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTCTAGAAGACAGAATGTGTaGGGCTTGCCGGTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: CPPVPCEFPACHRAREISRRQNV*GLPVPR
Trigger: TCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCT...AGAAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CTCAGAAGCCACTTAAATAGAAGATCCCTGGGGGAGAAGATATCCTGCCCCAGGAAACTGATCCAGCCGTaGAAGGAGGCAGCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: LRSHLNRRSLGEKISCPRKLIQP*KEAAEN
Trigger: GTTCTCTGCTGCCTCCTTCAACGGCTGGATCAGTTT...CCTGGGGCAGGATATCTTCTCCCCCAGGGATCTTCTATTTAAGTGGCTTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CTCAGCTGGTTTGGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAAAACTGATCCAGCCGTaGAAGGAGGCAGCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: LSWFGAKPTASHTWQQGKKLIQP*KEAAEN
Trigger: GTTCTCTGCTGCCTCCTTCAACGGCTGGATCAGTTT...TTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCCAAACCAGCTGAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GGAGCCAAGCCTACAGCATCACATACCTGGCAGCAAGGAAAAGAGTCGGGAAAAAAACTGATCCAGCCGTaGAAGGAGGCAGCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: GAKPTASHTWQQGKESGKKLIQP*KEAAEN
Trigger: GTTCTCTGCTGCCTCCTTCAACGGCTGGATCAGTTT...TTTTCCCGACTCTTTTCCTTGCTGCCAGGTATGTGATGCTGTAGGCTTGGCTCC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCACGTCCATGAGAAGGAAGAGGAGATCTaGTCAGCCTGTCTCATATGC +
Preference number: 5 (lower is better)
Translates to: RQSFLSWFCSAPIPHVHEKEEEI*SACLIC
Trigger: GCATATGAGACAGGCTGACAAGATCTCCTCTTCCTT...CTCATGGACGTGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000482456.6
CDS-3UTR CAA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGGGAGAGGCTGGCCTTaGCTGAAGGAAGAGGAGATC +
Preference number: 5 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPGRGWP*LKEEEI
Trigger: GATCTCCTCTTCCTTCAGCAAAGGCCAGCCTCTCCC...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp TCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCTCCTTGCACCTGAGCATGAGGACCCCGCAGTaGCTCCAAGCTCCTGTTAAG +
Preference number: 5 (lower is better)
Translates to: SCSKVTCLMYSLISLHLSMRTPQ*LQAPVK
Trigger: CTTAACAGGAGCTTGGAGCAACTGCGGGGTCCTCAT...GCTCAGGTGCAAGGAGATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp TGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTCTTTCTTTCCAGGAATCTaGAGGTCCTGGGTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: CPPVPCEFPACHRAREISFFPGI*RSWVRS
Trigger: ACTCCTCACCCAGGACCTCAAGATTCCTGGAAAGAA...AGAAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR CAA 90 bp TCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCTCCTTGCACCTGAGCAGGCACTCAGCTGGTTaGGAGCCAAGCCTACAGCAT +
Preference number: 5 (lower is better)
Translates to: SCSKVTCLMYSLISLHLSRHSAG*EPSLQH
Trigger: ATGCTGTAGGCTTGGCTCCAAACCAGCTGAGTGCCT...GCTCAGGTGCAAGGAGATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CAAGCTCCTGTTAAGAACCATCACCTTCTCCATCAGGTCCTGCAGAGCCATGGGCCAAAGTTTCCTCTCTaGGTTCTGCTCAGCACCCAT +
Preference number: 5 (lower is better)
Translates to: QAPVKNHHLLHQVLQSHGPKFPL*VLLSTH
Trigger: ATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGG...CCCATGGCTCTGCAGGACCTGATGGAGAAGGTGATGGTTCTTAACAGGAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp TGTTCAAAGGGTGAACAGCAGTCAGCTCTACCCCAGACCCTGGGCTACAGAGAACAAGCCCTTCAAACCTaGTCAGCCTGTCTCATATGC +
Preference number: 5 (lower is better)
Translates to: CSKGEQQSALPQTLGYREQALQT*SACLIC
Trigger: GCATATGAGACAGGCTGACAAGGTTTGAAGGGCTTG...TTCTCTGTAGCCCAGGGTCTGGGGTAGAGCTGACTGCTGTTCACCCTTTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp AGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCCCTGAAGCCAGGAGGTaGCCCTGCTCAAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: SSAGRESFLNMAPIPELGPEARR*PCSRQK
Trigger: TTTCTGCCTTGAGCAGGGCAACCTCCTGGCTTCAGG...GCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR CAA 90 bp CATCAGCCTGGCTCCATGACACTGACAAGATCCCCCTGCTGTGGCTCTCCAGCACTTCAGATCTCTCACTaGCTCATTTCCTTTGATAGG +
Preference number: 5 (lower is better)
Translates to: HQPGSMTLTRSPCCGSPALQISH*LISFDR
Trigger: CCTATCAAAGGAAATGAGCAAGTGAGAGATCTGAAG...TGCTGGAGAGCCACAGCAGGGGGATCTTGTCAGTGTCATGGAGCCAGGCTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS GCA 90 bp CATCACCTTCTCCATCAGGTCCACAGAGCTCGGGAAATTTCTCTGTaGCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: HHLLHQVHRAREISL*LSMSVAKPVPLSSS
Trigger: AGAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATTTCCCGAGCTCTGTGGACCTGATGGAGAAGGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469824.1
CDS-3UTR CAA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCACAGATACAAAGGGTATaGGCTGGCTGGGCTCCATGC +
Preference number: 5 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPQIQRV*AGWAPC
Trigger: GCATGGAGCCCAGCCAGCCAATACCCTTTGTATCTG...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp GCCCTGCCTCCAGGCCTGAGAGTGTCTTGGACAGATCCTAGAAGGCCAGACATAAGGATGTGGGTCACATaGTATAGAATAAGCATGCCA +
Preference number: 5 (lower is better)
Translates to: ALPPGLRVSWTDPRRPDIRMWVT*YRISMP
Trigger: TGGCATGCTTATTCTATACAATGTGACCCACATCCT...TATGTCTGGCCTTCTAGGATCTGTCCAAGACACTCTCAGGCCTGGAGGCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CAA 90 bp GCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCACCAGCTGCTCTGTGTaGGTAGCTTATATACCACCT +
Preference number: 5 (lower is better)
Translates to: ATNANPIGEGSPETCGGCTSCSV*VAYIPP
Trigger: AGGTGGTATATAAGCTACCAACACAGAGCAGCTGGT...GCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp CAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGGTGGCTGCGAGGACCAGCTGCTCTGTGTaGGTAGCTTATATACCACCT +
Preference number: 5 (lower is better)
Translates to: QMQIQSEKVALRHVVAARTSCSV*VAYIPP
Trigger: AGGTGGTATATAAGCTACCAACACAGAGCAGCTGGT...CCTCGCAGCCACCACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp TGCCCTCCTGTTCCATGCGAGTTCCCAGCATGTCACAGAGCTCGGGAAATTTCTACCAGCTGCTCTGTGTaGGTAGCTTATATACCACCT +
Preference number: 5 (lower is better)
Translates to: CPPVPCEFPACHRAREISTSCSV*VAYIPP
Trigger: AGGTGGTATATAAGCTACCAACACAGAGCAGCTGGT...AGAAATTTCCCGAGCTCTGTGACATGCTGGGAACTCGCATGGAACAGGAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCTTCAGGCTACAGGTAGTAGCGCTCCTGTGTTaGCTTCAGCAGATCTGTACC +
Preference number: 5 (lower is better)
Translates to: EYVSSKASASLQFFRLQVVALLC*LQQICT
Trigger: GGTACAGATCTGCTGAAGCAAACACAGGAGCGCTAC...TACCTGTAGCCTGAAGAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp AGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTAAGCCTGGTGGCATTTaGCCCAGCACTCCACCAGCC +
Preference number: 5 (lower is better)
Translates to: SAGRESFLNMAPIPELGFKPGGI*PSTPPA
Trigger: GGCTGGTGGAGTGCTGGGCAAAATGCCACCAGGCTT...AAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp GCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTATGAGGACCCCGCAGTaGCTCCAAGCTCCTGTTAAG +
Preference number: 5 (lower is better)
Translates to: AALEENHSLIWLQFQNWAMRTPQ*LQAPVK
Trigger: CTTAACAGGAGCTTGGAGCAACTGCGGGGTCCTCAT...AGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTGAAAGGGGGAGACTGTaGGCCCAAGACAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: KDSATNANPIGEGSPETCERGRL*AQDSRT
Trigger: GGTTCTGCTGTCTTGGGCCAACAGTCTCCCCCTTTC...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAAGAAAGGGGGAGACTGTaGGCCCAAGACAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKERGRL*AQDSRT
Trigger: GGTTCTGCTGTCTTGGGCCAACAGTCTCCCCCTTTC...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp TTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATGCCAAAGTTTCCTCTCTaGGTTCTGCTCAGCACCCAT +
Preference number: 5 (lower is better)
Translates to: LEMELGPGEKAGIPICKMPKFPL*VLLSTH
Trigger: ATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGG...CATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTTCTGGAGGCTGTGACTaGGATCCCAGGGTCATTGGC +
Preference number: 5 (lower is better)
Translates to: KDSATNANPIGEGSPETCSGGCD*DPRVIG
Trigger: GCCAATGACCCTGGGATCCAAGTCACAGCCTCCAGA...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462434.5
CDS TCA 90 bp TGCATGCATCCTTTGACTCCATGCTGGAGTCACACCATTTCATCCTaGAGCCTGGGACCACACTTACCACAGAGCTCGGGAAATTTCTCT +
Preference number: 5 (lower is better)
Translates to: CMHPLTPCWSHTISS*SLGPHLPQSSGNFS
Trigger: AGAGAAATTTCCCGAGCTCTGTGGTAAGTGTGGTCCCAGGCTTCAGGATGAAATGGTGTGACTCCAGCATGGAGTCAAAGGATGCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498298.1
CDS-3UTR CAA 90 bp TTGGAGATGGAGTTGGGACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATGACCAGCTGCTCTGTGTaGGTAGCTTATATACCACCT +
Preference number: 5 (lower is better)
Translates to: LEMELGPGEKAGIPICKMTSCSV*VAYIPP
Trigger: AGGTGGTATATAAGCTACCAACACAGAGCAGCTGGT...CATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTCCCAACTCCATCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GCTCCTGTCTCACAGCCTAAGACAGCTTCCAGCAAAAGGCAGTTCATCCCTTTCAAGGAAGAGGAGATCTaGTCAGCCTGTCTCATATGC +
Preference number: 5 (lower is better)
Translates to: APVSQPKTASSKRQFIPFKEEEI*SACLIC
Trigger: GCATATGAGACAGGCTGACAAGATCTCCTCTTCCTT...GAAAGGGATGAACTGCCTTTTGCTGGAAGCTGTCTTAGGCTGTGAGACAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000482456.6
CDS-3UTR CAA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCAAAGCAGAGGCTTCCTTaGTGGTGTGTTTGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSKQRLP*WCVWRP
Trigger: AGGCCTCCAAACACACCACAAAGGAAGCCTCTGCTT...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCAGTAGCGCTCCTGTGTTaGCTTCAGCAGATCTGTACC +
Preference number: 5 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSVALLC*LQQICT
Trigger: GGTACAGATCTGCTGAAGCAAACACAGGAGCGCTAC...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAAATGTCTCTGGCAGCTaGTTCCTCTGGAGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPNVSGS*FLWRFP
Trigger: GGGAAACCTCCAGAGGAACAAGCTGCCAGAGACATT...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp AATTTCATTCTGGAGTCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCAAGGACCCCCAACCCTaGAGGAGCAGCGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: NFILESCSKVTCLMYSLIKDPQP*RSSAGR
Trigger: TCTTCCAGCGCTGCTCCTCAAGGGTTGGGGGTCCTT...GATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp CTGGGCTACAGAGAAATACGGACCTGGAAATACCAAGTCAGAGGCAGGGAAAAGCAAGCCCTTCAAACCTaGTCAGCCTGTCTCATATGC +
Preference number: 5 (lower is better)
Translates to: LGYREIRTWKYQVRGREKQALQT*SACLIC
Trigger: GCATATGAGACAGGCTGACAAGGTTTGAAGGGCTTG...CTTTTCCCTGCCTCTGACTTGGTATTTCCAGGTCCGTATTTCTCTGTAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp ATTTTAACAGCGCCAAAGTTTCCTCTCTTGGTTCTGCTCAGCACCCATCCCTCAAGAAGACAGAATGTGTaGGGCTTGCCGGTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: ILTAPKFPLLVLLSTHPSRRQNV*GLPVPR
Trigger: TCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCT...TGAGGGATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGGCGCTGTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp AGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTAGGTATCAGTGGTGCTaGTGCCACTTGCTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: SAGRESFLNMAPIPELGFRYQWC*CHLLWH
Trigger: GTGCCAGAGCAAGTGGCACAAGCACCACTGATACCT...AAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp AATTTCATTCTGGAGTCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCGAAAGGGGGAGACTGTaGGCCCAAGACAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: NFILESCSKVTCLMYSLIERGRL*AQDSRT
Trigger: GGTTCTGCTGTCTTGGGCCAACAGTCTCCCCCTTTC...GATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGACTCCAGAATGAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp GGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAATTCTTTCCAGGAATCTaGAGGTCCTGGGTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: GEDILPQVLTECSIRESEFFPGI*RSWVRS
Trigger: ACTCCTCACCCAGGACCTCAAGATTCCTGGAAAGAA...TTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370345.8
ENST00000479697.5
CDS-3UTR CAA 90 bp ATCACGGGAAGTCGATCATCCTCTGAGCACAGCACTAACTGGGTGGCTATGTCAAAGAAACAGAATCTGTaGCAGAAGTCCCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: ITGSRSSSEHSTNWVAMSKKQNL*QKSPLL
Trigger: CAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCTT...TGACATAGCCACCCAGTTAGTGCTGTGCTCAGAGGATGATCGACTTCCCGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp AATTTCTCTGTGCCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTCTCCAGTTCCCAAAGTTTCCTCTCTaGGTTCTGCTCAGCACCCAT +
Preference number: 5 (lower is better)
Translates to: NFSVPEYVSSKASASLQFPKFPL*VLLSTH
Trigger: ATGGGTGCTGAGCAGAACCAAGAGAGGAAACTTTGG...GAACTGGAGAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp ATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAGAACTGATTTTCCAAGACAGTGCCTaGATGTCCTCTGGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: ILPQVLTECSIRESEELIFQDSA*MSSGGC
Trigger: ACAGCCTCCAGAGGACATCAAGGCACTGTCTTGGAA...AATCAGTTCTTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462434.5
ENST00000482456.6
CDS TCA 90 bp GAAGGACTGACTGAATCCTCCAAGGAATTAGAACGTGGTCATTGGTaGATGTGCGAGGGAGTGGGTAGGGAAAGATGCATTGACCTTGTT +
Preference number: 5 (lower is better)
Translates to: EGLTESSKELERGHW*MCEGVGRERCIDLV
Trigger: AACAAGGTCAATGCATCTTTCCCTACCCACTCCCTCGCACATTCACCAATGACCACGTTCTAATTCCTTGGAGGATTCAGTCAGTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492667.5
CDS-3UTR CAA 90 bp TCTTGCTCTAAGGTCACCTGCCTGATGTATAGTCTCATCTCCTTGCACCTGAGCTGGATCCCAGGGTCATaGGCACATTCAAGTTATTCA +
Preference number: 5 (lower is better)
Translates to: SCSKVTCLMYSLISLHLSWIPGS*AHSSYS
Trigger: TGAATAACTTGAATGTGCCAATGACCCTGGGATCCA...GCTCAGGTGCAAGGAGATGAGACTATACATCAGGCAGGTGACCTTAGAGCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTAGAAGACAGAATGTGTaGGGCTTGCCGGTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: KDSATNANPIGEGSPETCRRQNV*GLPVPR
Trigger: TCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCT...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAAAGAAGACAGAATGTGTaGGGCTTGCCGGTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKRRQNV*GLPVPR
Trigger: TCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCT...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp TCAAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATTGTTGTCTGTCACTGTaGAGGTCATTTCCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SKTVPQMQIQSEKVALRHCCLSL*RSFPLG
Trigger: GCCCAAGGGAAATGACCTCAACAGTGACAGACAACA...ATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAATGTTGTCTGTCACTGTaGAGGTCATTTCCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKCCLSL*RSFPLG
Trigger: GCCCAAGGGAAATGACCTCAACAGTGACAGACAACA...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CCCTTGAGGAGCAGCGCTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCATTGTCTTTAAGTCAGTaGCAGACAGGGAGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: PLRSSAGRESFLNMAPIPLSLSQ*QTGSSV
Trigger: AACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAA...TGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAGCGCTGCTCCTCAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp GGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCATCCAGATACAAAGGGTATaGGCTGGCTGGGCTCCATGC +
Preference number: 5 (lower is better)
Translates to: GRESFLNMAPIPELGFIIQIQRV*AGWAPC
Trigger: GCATGGAGCCCAGCCAGCCAATACCCTTTGTATCTG...GATGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp CTCTGGCGGGCTTCAGGAACTGCCACAGCATCTTTTCACTTTGCAGTAAAGCTTAGGATGTGGGTCACATaGTATAGAATAAGCATGCCA +
Preference number: 5 (lower is better)
Translates to: LWRASGTATASFHFAVKLRMWVT*YRISMP
Trigger: TGGCATGCTTATTCTATACAATGTGACCCACATCCT...AAGCTTTACTGCAAAGTGAAAAGATGCTGTGGCAGTTCCTGAAGCCCGCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462434.5
CDS-3UTR CAA 90 bp TCCCTGAAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTGGATCCCAGGGTCATaGGCACATTCAAGTTATTCA +
Preference number: 5 (lower is better)
Translates to: SLKYYRAHPITRVKVKAFWIPGS*AHSSYS
Trigger: TGAATAACTTGAATGTGCCAATGACCCTGGGATCCA...GAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTTCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp CATCCTTCCAATTCTTTTGCACAACACAGGCTAGAAGCGAGGAGATTTTGGTTTGTAGCGCTCCTGTGTTaGCTTCAGCAGATCTGTACC +
Preference number: 5 (lower is better)
Translates to: HPSNSFAQHRLEARRFWFVALLC*LQQICT
Trigger: GGTACAGATCTGCTGAAGCAAACACAGGAGCGCTAC...AAACCAAAATCTCCTCGCTTCTAGCCTGTGTTGTGCAAAAGAATTGGAAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp CTGGAAGAGAATCATTCCTTAATATGGCTCCAATTCCAGAACTGGGCTTTATCAATGAGGACCCCGCAGTaGCTCCAAGCTCCTGTTAAG +
Preference number: 5 (lower is better)
Translates to: LEENHSLIWLQFQNWALSMRTPQ*LQAPVK
Trigger: CTTAACAGGAGCTTGGAGCAACTGCGGGGTCCTCAT...TGATAAAGCCCAGTTCTGGAATTGGAGCCATATTAAGGAATGATTCTCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp GGAGAAGATATCCTGCCCCAGGTCCTTACAGAGTGTAGTATTAGGGAGAGTGAAAGGATGTGGGTCACATaGTATAGAATAAGCATGCCA +
Preference number: 5 (lower is better)
Translates to: GEDILPQVLTECSIRESERMWVT*YRISMP
Trigger: TGGCATGCTTATTCTATACAATGTGACCCACATCCT...TTCACTCTCCCTAATACTACACTCTGTAAGGACCTGGGGCAGGATATCTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS-3UTR CAA 90 bp AGAAGGGAGAAACAAAAGACCCACATGATGGGTCACAGCAGAGGTAGGCTTAAATGGATCCCAGGGTCATaGGCACATTCAAGTTATTCA +
Preference number: 5 (lower is better)
Translates to: RREKQKTHMMGHSRGRLKWIPGS*AHSSYS
Trigger: TGAATAACTTGAATGTGCCAATGACCCTGGGATCCA...TTTAAGCCTACCTCTGCTGTGACCCATCATGTGGGTCTTTTGTTTCTCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000482456.6
CDS-3UTR CAA 90 bp AAATACTACAGGGCCCATCCAATAACAAGAGTCAAGGTGAAGGCCTTCTTCACATTGTCTTTAAGTCAGTaGCAGACAGGGAGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: KYYRAHPITRVKVKAFFTLSLSQ*QTGSSV
Trigger: AACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAA...TGTGAAGAAGGCCTTCACCTTGACTCTTGTTATTGGATGGGCCCTGTAGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
CDS-3UTR CAA 90 bp AAAGACAGTGCCACAAATGCAAATCCAATCGGAGAAGGTAGCCCTGAGACATGTAAGAAACAGAATCTGTaGCAGAAGTCCCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: KDSATNANPIGEGSPETCKKQNL*QKSPLL
Trigger: CAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCTT...ACATGTCTCAGGGCTACCTTCTCCGATTGGATTTGCATTTGTGGCACTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS-3UTR CAA 90 bp TCCTTTTTGTCTTTAAGTCAGTTGCAGACAGGGAGCAGCGTTGGAGAAGCGCCTACTTGCTCATTTCCTTaGATAGGTATAGTACTCCTC +
Preference number: 5 (lower is better)
Translates to: SFLSLSQLQTGSSVGEAPTCSFP*IGIVLL
Trigger: GAGGAGTACTATACCTATCAAAGGAAATGAGCAAGT...AGGCGCTTCTCCAACGCTGCTCCCTGTCTGCAACTGACTTAAAGACAAAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479697.5
CDS-3UTR CAA 90 bp ATTGCACCATTAAGTACATCACTGCATCAAAGACAGTGCCACAAATGCAAATCCAAGAAACAGAATCTGTaGCAGAAGTCCCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: IAPLSTSLHQRQCHKCKSKKQNL*QKSPLL
Trigger: CAGAAGAGGGGACTTCTGCAACAGATTCTGTTTCTT...GGATTTGCATTTGTGGCACTGTCTTTGATGCAGTGATGTACTTAATGGTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000479697.5
CDS TCA 90 bp TGGCAACATTCTCTTCTTCTCTTCAACAAGTACATGTTTCTGATGTaGAAAGCAGCTTACCTTCTTCTGAAGCTCATCTTTACTGTATCC +
Preference number: 5 (lower is better)
Translates to: WQHSLLLFNKYMFLM*KAAYLLLKLIFTVS
Trigger: GGATACAGTAAAGATGAGCTTCAGAAGAAGGTAAGCTGCTTTTCACATCAGAAACATGTACTTGTTGAAGAGAAGAAGAGAATGTTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494350.1
CDS TCA 72 bp CTGCCCCCAGTCTCCCTCAGCACATGCCTTGAGGAATaGGGCCCATCTACCATGACCTGCACCCAAGGAGGG +
Preference number: 6 (lower is better)
Translates to: LPPVSLSTCLEE*GPSTMTCTQGG
Trigger: CCCTCCTTGGGTGCAGGTCATGGTAGATGGGCCTCATTCCTCAAGGCATGTGCTGAGGGAGACTGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485800.6
ENST00000492667.5
CDS CCA 72 bp TCCACGGCCGGACCCAGTTCCCCAAGCAGGAGAGCCTaGCTTAGGAGTCCATCAATATCTGCAGGCAGAAGC +
Preference number: 6 (lower is better)
Translates to: STAGPSSPSRRA*LRSPSISAGRS
Trigger: GCTTCTGCCTGCAGATATTGATGGACTCCTAAGCCAGGCTCTCCTGCTTGGGGAACTGGGTCCGGCCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469824.1
ENST00000498298.1
CDS CAA 72 bp TTGGGCAGATGTTCCTGTGGCCAGATACAAAGGGTATaGGCTGGCTGGGCTCCATGCCTGGACAGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: LGRCSCGQIQRV*AGWAPCLDSWP
Trigger: CGGCCAGCTGTCCAGGCATGGAGCCCAGCCAGCCAATACCCTTTGTATCTGGCCACAGGAACATCTGCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS CCA 72 bp TGTTCCTGTGGCCAGATACAAAGGGTATTGGCTGGCTaGGCTCCATGCCTGGACAGCTGGCCGCTCAAGTTC +
Preference number: 6 (lower is better)
Translates to: CSCGQIQRVLAG*APCLDSWPLKF
Trigger: GAACTTGAGCGGCCAGCTGTCCAGGCATGGAGCCCAGCCAGCCAATACCCTTTGTATCTGGCCACAGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS CCA 72 bp GATGAGCAGCCTCCCTTTCTCTGCAGTAAGGACACCTaGTACCTGCCCCCAGTCTCCCTCAGCACATGCCTT +
Preference number: 6 (lower is better)
Translates to: DEQPPFLCSKDT*YLPPVSLSTCL
Trigger: AAGGCATGTGCTGAGGGAGACTGGGGGCAGGTACCAGGTGTCCTTACTGCAGAGAAAGGGAGGCTGCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485800.6
ENST00000492667.5
CDS CAA 72 bp GGTGAATGTGCGAGGGAGTGGGTAGGGAAAGATGCATaGACCTTGTTCCTCTGGAGGTTTCCCCTGGGGGCT +
Preference number: 6 (lower is better)
Translates to: GECAREWVGKDA*TLFLWRFPLGA
Trigger: AGCCCCCAGGGGAAACCTCCAGAGGAACAAGGTCAATGCATCTTTCCCTACCCACTCCCTCGCACATTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492667.5
CDS CAA 90 bp AACTGCCTTGCCACTGGGGTGAGCAGAAGACAGAATGTGTTGGGCTaGCCGGTTCCAAGACAGTGCCTTGATGTCCTCTGGAGGCTCATG +
Preference number: 6 (lower is better)
Translates to: NCLATGVSRRQNVLG*PVPRQCLDVLWRLM
Trigger: CATGAGCCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484848.5
CDS TCA 72 bp GGAGGTTGCCCTGGAAAGGATTCAAGTCGAGGGCTCTaGCAGCCCCCGTGTGCTTCTGTTTCTGAGCAATCA +
Preference number: 6 (lower is better)
Translates to: GGCPGKDSSRGL*QPPCASVSEQS
Trigger: TGATTGCTCAGAAACAGAAGCACACGGGGGCTGTCAGAGCCCTCGACTTGAATCCTTTCCAGGGCAACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS TCA 72 bp AGGGAGGGGAATACATTGTCCTTGTCACCTGCAGGCTaGGTTCTCCTGGAACTCCTGGGGGAGCATGACTCA +
Preference number: 6 (lower is better)
Translates to: REGNTLSLSPAG*VLLELLGEHDS
Trigger: TGAGTCATGCTCCCCCAGGAGTTCCAGGAGAACTCAGCCTGCAGGTGACAAGGACAATGTATTCCCCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485800.6
ENST00000492667.5
CDS TCA 72 bp TCAGCACATGCCTTGAGGAATGAGGCCCATCTACCATaGCCTGCACCCAAGGAGGGCTGGAAGGTTTCCCAA +
Preference number: 6 (lower is better)
Translates to: SAHALRNEAHLP*PAPKEGWKVSQ
Trigger: TTGGGAAACCTTCCAGCCCTCCTTGGGTGCAGGTCATGGTAGATGGGCCTCATTCCTCAAGGCATGTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485800.6
ENST00000492667.5
CDS GCA 72 bp CTCCCTCTTTGCTGGGCCCAATGCCCTACCCAACCCTaGGAAAGCTCTACTGTGATAAACAGCACTCCCATC +
Preference number: 6 (lower is better)
Translates to: LPLCWAQCPTQP*ESSTVINSTPI
Trigger: GATGGGAGTGCTGTTTATCACAGTAGAGCTTTCGCAGGGTTGGGTAGGGCATTGGGCCCAGCAAAGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484848.5
CDS GCA 72 bp TTTCCCAAGGGAGGGGAATACATTGTCCTTGTCACCTaGAGGCTGAGTTCTCCTGGAACTCCTGGGGGAGCA +
Preference number: 6 (lower is better)
Translates to: FPKGGEYIVLVT*RLSSPGTPGGA
Trigger: TGCTCCCCCAGGAGTTCCAGGAGAACTCAGCCTGCAGGTGACAAGGACAATGTATTCCCCTCCCTTGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485800.6
ENST00000492667.5
CDS CCA 72 bp AACCCAGAAGAGGGATCCATGGAAGGAAGACTGACCTaGGTGAGGAGTCAAGATGCCAGTGGTTGGGAGGAC +
Preference number: 6 (lower is better)
Translates to: NPEEGSMEGRLT*VRSQDASGWED
Trigger: GTCCTCCCAACCACTGGCATCTTGACTCCTCACCCAGGTCAGTCTTCCTTCCATGGATCCCTCTTCTGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492667.5
CDS CAA 72 bp AGTTCTGGGGCCCAGTCCAGGCAAGATGCACGTATTTaGTGGGGAACCCAGGTCAGTGACACCTATGGGAAG +
Preference number: 6 (lower is better)
Translates to: SSGAQSRQDARI*WGTQVSDTYGK
Trigger: CTTCCCATAGGTGTCACTGACCTGGGTTCCCCACAAAATACGTGCATCTTGCCTGGACTGGGCCCCAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485800.6
CDS TCA 72 bp CAGATCCCAAATGAAGATTTCAGAATCGCTGGCCCCTaGAGCCAGGAGGTTGCCCTGCTCAAGGCAGAAAGG +
Preference number: 6 (lower is better)
Translates to: QIPNEDFRIAGP*SQEVALLKAER
Trigger: CCTTTCTGCCTTGAGCAGGGCAACCTCCTGGCTTCAGGGGCCAGCGATTCTGAAATCTTCATTTGGGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS CCA 72 bp TCTGGGGCCCAGTCCAGGCAAGATGCACGTATTTTGTaGGGAACCCAGGTCAGTGACACCTATGGGAAGAAA +
Preference number: 6 (lower is better)
Translates to: SGAQSRQDARIL*GTQVSDTYGKK
Trigger: TTTCTTCCCATAGGTGTCACTGACCTGGGTTCCCCACAAAATACGTGCATCTTGCCTGGACTGGGCCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485800.6
CDS CAA 72 bp ACAGGCTCCTTCCCCGAAGACAGGATGTGGGTCACATaGTATAGAATAAGCATGCCATTGTCCCCGCCGCCA +
Preference number: 6 (lower is better)
Translates to: TGSFPEDRMWVT*YRISMPLSPPP
Trigger: TGGCGGCGGGGACAATGGCATGCTTATTCTATACAATGTGACCCACATCCTGTCTTCGGGGAAGGAGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS CAA 90 bp CCCGAAGACAGGATGTGGGTCACATTGTATAGAATAAGCATGCCATaGTCCCCGCCGCCAACAATAACCCCGGAGCTTTCCAGAAGCCCA +
Preference number: 6 (lower is better)
Translates to: PEDRMWVTLYRISMP*SPPPTITPELSRSP
Trigger: TGGGCTTCTGGAAAGCTCCGGGGTTATTGTTGGCGGCGGGGACAATGGCATGCTTATTCTATACAATGTGACCCACATCCTGTCTTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS TCA 72 bp AGGCCAGGAAGCAAAAAGATGGGCCCAGTTACAGATTaGCAGACAGCCTCTCCAAGACAGAAGACCAGACCC +
Preference number: 6 (lower is better)
Translates to: RPGSKKMGPVTD*QTASPRQKTRP
Trigger: GGGTCTGGTCTTCTGTCTTGGAGAGGCTGTCTGTCAATCTGTAACTGGGCCCATCTTTTTGCTTCCTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484848.5
CDS GCA 72 bp CTCCATCAGGTCCACAGAGCTCGGGAAATTTCTCTGTaGCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTC +
Preference number: 6 (lower is better)
Translates to: LHQVHRAREISL*LSMSVAKPVPL
Trigger: GAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATTTCCCGAGCTCTGTGGACCTGATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469824.1
CDS GCA 72 bp GAGTCCATCAATATCTGCAGGCAGAAGCATCCCCTGTaGATTAGTTGCTCTCAAACCCCAACTTCCTGCCCC +
Preference number: 6 (lower is better)
Translates to: ESINICRQKHPL*ISCSQTPTSCP
Trigger: GGGGCAGGAAGTTGGGGTTTGAGAGCAACTAATGCACAGGGGATGCTTCTGCCTGCAGATATTGATGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498298.1
CDS CCA 72 bp ACCCTTAGGTTAGTGAGCCCAACCCAGCTCCTACCCTaGCAGCATGGAAGGGATAAGGGAAGACTTAAGTTC +
Preference number: 6 (lower is better)
Translates to: TLRLVSPTQLLP*QHGRDKGRLKF
Trigger: GAACTTAAGTCTTCCCTTATCCCTTCCATGCTGCCAGGGTAGGAGCTGGGTTGGGCTCACTAACCTAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485800.6
CDS TCA 72 bp CAGATCCCAAATGAAGATTTCAGAATCGCTGGCCCCTaGAGCCAGGAGGTTGCCCTGGAAAGGATTCAAGTC +
Preference number: 6 (lower is better)
Translates to: QIPNEDFRIAGP*SQEVALERIQV
Trigger: GACTTGAATCCTTTCCAGGGCAACCTCCTGGCTTCAGGGGCCAGCGATTCTGAAATCTTCATTTGGGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS TCA 72 bp GAATGTGTTGGGCTTGCCGGTTCCAAGACAGTGCCTTaGTGTCCTCTGGAGGCTCATGATACTGTAAGCACA +
Preference number: 6 (lower is better)
Translates to: ECVGLAGSKTVP*CPLEAHDTVST
Trigger: TGTGCTTACAGTATCATGAGCCTCCAGAGGACATCAAGGCACTGTCTTGGAACCGGCAAGCCCAACACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484848.5
CDS TCA 72 bp GTCCTTCTCATGGCTTCCCTAAGGACTAGTCCCCAGTaGCTCACAGTCACACTGTTCCCATTACAGCAGAGT +
Preference number: 6 (lower is better)
Translates to: VLLMASLRTSPQ*LTVTLFPLQQS
Trigger: ACTCTGCTGTAATGGGAACAGTGTGACTGTGAGTCACTGGGGACTAGTCCTTAGGGAAGCCATGAGAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485800.6
ENST00000492667.5
CDS GCA 72 bp GACCACACTTACCACAGAGCTCGGGAAATTTCTCTGTaGCTGAGTATGTCAGTAGCAAAGCCAGTGCCTCTC +
Preference number: 6 (lower is better)
Translates to: DHTYHRAREISL*LSMSVAKPVPL
Trigger: GAGAGGCACTGGCTTTGCTACTGACATACTCAGGCACAGAGAAATTTCCCGAGCTCTGTGGTAAGTGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498298.1
CDS CCA 72 bp TGGCAGCATGGAAGGGATAAGGGAAGACTTAAGTTCTaGGGCCCAGTCCAGGCAAGATGCACGTATTTTGTG +
Preference number: 6 (lower is better)
Translates to: WQHGRDKGRLKF*GPVQARCTYFV
Trigger: CACAAAATACGTGCATCTTGCCTGGACTGGGCCCCAGAACTTAAGTCTTCCCTTATCCCTTCCATGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485800.6
CDS CAA 72 bp AGGATGTGGGTCACATTGTATAGAATAAGCATGCCATaGTCCCCGCCGCCAACAATAACCCCGGAGCTTTCC +
Preference number: 6 (lower is better)
Translates to: RMWVTLYRISMP*SPPPTITPELS
Trigger: GGAAAGCTCCGGGGTTATTGTTGGCGGCGGGGACAATGGCATGCTTATTCTATACAATGTGACCCACATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
CDS TCA 72 bp TACCTGGTGAGAAGGCTGGGATCCCAATCTGTAAGATaGTGTCTCTTTAGAGTGGAGGGTAGCTCCCACAAC +
Preference number: 6 (lower is better)
Translates to: YLVRRLGSQSVR*CLFRVEGSSHN
Trigger: GTTGTGGGAGCTACCCTCCACTCTAAAGAGACATCATCTTACAGATTGGGATCCCAGCCTTCTCACCAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484848.5
CDS CAA 90 bp AAGGAAAGACATGAGTCTAACCTGAGAGACTCCATGGCTCTGGTTTaGGGGAGTGGCAGGAATGACAGTGAACAAGGAGACAGAAGAGTG +
Preference number: 6 (lower is better)
Translates to: KERHESNLRDSMALV*GSGRNDSEQGDRRV
Trigger: CACTCTTCTGTCTCCTTGTTCACTGTCATTCCTGCCACTCCCCAAAACCAGAGCCATGGAGTCTCTCAGGTTAGACTCATGTCTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492667.5
CDS TCA 72 bp ACTGAATCCTCCAAGGAATTAGAACGTGGTCATTGGTaGATGTGCGAGGGAGTGGGTAGGGAAAGATGCATT +
Preference number: 6 (lower is better)
Translates to: TESSKELERGHW*MCEGVGRERCI
Trigger: AATGCATCTTTCCCTACCCACTCCCTCGCACATTCACCAATGACCACGTTCTAATTCCTTGGAGGATTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492667.5
CDS CCA 72 bp AATGTGCCATTTGTGCTGAAGGAGGAATCTAGCTGTTaGGCAGATGTTCCTGTGGCCAGATACAAAGGGTAT +
Preference number: 6 (lower is better)
Translates to: NVPFVLKEESSC*ADVPVARYKGY
Trigger: ATACCCTTTGTATCTGGCCACAGGAACATCTGCCCAACAGCTAGATTCCTCCTTCAGCACAAATGGCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370345.8
ENST00000462434.5
ENST00000469546.6
ENST00000479697.5
ENST00000480905.1
ENST00000482456.6
CDS CAA 90 bp AGAACTGAATCTATGTTCTATGGAAGTTGGGAATTTTCATCAGTTTaGTTCACAATATATTCCAAGTGCCCAGAACCATGCTTGGCACGT +
Preference number: 6 (lower is better)
Translates to: RTESMFYGSWEFSSV*FTIYSKCPEPCLAR
Trigger: ACGTGCCAAGCATGGTTCTGGGCACTTGGAATATATTGTGAACAAAACTGATGAAAATTCCCAACTTCCATAGAACATAGATTCAGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484848.5