RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC24B (Homo sapiens)

Ensembl gene IDs: ENSG00000138802

Ensembl transcript IDs: ENST00000265175.5, ENST00000399100.6, ENST00000504968.6

Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTTCTCACGCGCTTCTCTaGCAGATTATGCTTTACCTA +
Preference number: 2 (lower is better)
Translates to: SYKQITRYQCLLASLARVSHALL*QIMLYL
Trigger: TAGGTAAAGCATAATCTGTCAGAGAAGCGCGTGAGA...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
3UTR-3UTR TCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTTCAAAATATACTTGGTaGAACAGCATCATCGTTACC +
Preference number: 2 (lower is better)
Translates to: SYKQITRYQCLLASLARVSKYTW*NSIIVT
Trigger: GGTAACGATGATGCTGTTTCACCAAGTATATTTTGA...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265175.5
3UTR-3UTR GCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTATCAGACAGAGTGCTGTaGGTTGCATCTTGTATTAAC +
Preference number: 2 (lower is better)
Translates to: CVPLWTQFIICISQPHSLSDRVL*VASCIN
Trigger: GTTAATACAAGATGCAACGCACAGCACTCTGTCTGA...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
3UTR-3UTR GCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAAACAGAGCACTGTACTaGCATACTACTGGAAATGTG +
Preference number: 2 (lower is better)
Translates to: CVPLWTQFIICISQPHSLNRALY*HTTGNV
Trigger: CACATTTCCAGTAGTATGGCAGTACAGTGCTCTGTT...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
3UTR-3UTR CCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAGTACTGCCATACTACTaGAAATGTGTAGAAACCAAT +
Preference number: 2 (lower is better)
Translates to: CVPLWTQFIICISQPHSLVLPYY*KCVETN
Trigger: ATTGGTTTCTACACATTTCCAGTAGTATGGCAGTAC...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
3UTR-3UTR CAA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCGCCTTTTGGCATCTCTaGCCAGAGTTCAAGTCCAGA +
Preference number: 3 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSAFWHL*PEFKSR
Trigger: TCTGGACTTGAACTCTGGCAAGAGATGCCAAAAGGC...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265175.5
3UTR-3UTR CAA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCACAGAGTGCTGTGCGTaGCATCTTGTATTAACAAAT +
Preference number: 3 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSTECCA*HLVLTN
Trigger: ATTTGTTAATACAAGATGCAACGCACAGCACTCTGT...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
3UTR GCA 72 bp AAAAGTAATTCATATAAACAAATAACACGGTACCAATaGCTTTTGGCATCTCTTGCCAGAGTTCAAGTCCAG +
Preference number: 3 (lower is better)
Translates to: KSNSYKQITRYQ*LLASLARVQVQ
Trigger: CTGGACTTGAACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGAATTACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265175.5
3UTR-3UTR CAA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTACATAGCTACATAAATTaGCCAGCTTGCAATGAACAG +
Preference number: 3 (lower is better)
Translates to: CVPLWTQFIICISQPHSLHSYIN*PACNEQ
Trigger: CTGTTCATTGCAAGCTGGCAAATTTATGTAGCTATG...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTTGGGCTGGACCGTTCTaGTGGTGCGGCGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVWAGPF*WCGAGP
Trigger: GGGCCCGGCGCCGCACCAGCAGAACGGTCCAGCCCA...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTCCGCTCCGCCGAACTTaGGCGGGATCCGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVPLRRT*AGSGRW
Trigger: CCAGCGCCCGGATCCCGCCCAAGTTCGGCGGAGCGG...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAGCTGGACCGTTCTGCTaGTGCGGCGCCGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLAGPFC*CGAGPA
Trigger: TGCGGGCCCGGCGCCGCACCAGCAGAACGGTCCAGC...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGTGGATCCCACAATATaGGGGGCAGGAGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCVDPTI*GAGGPL
Trigger: CAGGGGTCCTCCTGCCCCTCATATTGTGGGATCCAC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGCCATTTTTGAAGGCTaGGGGACGACAGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCAIFEG*GTTGAG
Trigger: TCCAGCTCCTGTCGTCCCTCAGCCTTCAAAAATGGC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTGGGCAGGAGGACCCCTaGTGTACAACTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVGQEDP*CTTAVL
Trigger: GAGCACAGCAGTTGTACAGCAGGGGTCCTCCTGCCC...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCAGGCTTAGCCATTTTTaGAGGCTGAGGGACGACAGG +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCRLSHF*RLRDDR
Trigger: CCTGTCGTCCCTCAGCCTTCAAAAATGGCTAAGCCT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCCCCCTGCTGTACAACTaGTGTGCTCCTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSPLLYN*CAPGCW
Trigger: CCAGCAACCAGGAGCACAGCAGTTGTACAGCAGGGG...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCACGCAACAGAAGAGCTaGCAGAGTACATGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCTQQKS*QSTWLD
Trigger: GTCCAGCCATGTACTCTGCCAGCTCTTCTGTTGCGT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCTTGCCCAGGCTGGAGTaGAGTGGCGTGATCTTAGCT +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSLPRLE*SGVILA
Trigger: AGCTAAGATCACGCCACTGCACTCCAGCCTGGGCAA...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCTGTGCTCCTGGTTGCTaGTTCACTGTGTTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCCAPGC*FTVLGV
Trigger: GACTCCTAACACAGTGAACCAGCAACCAGGAGCACA...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGCACTCGTATGCAAATaGGATGCTGACGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCALVCK*DADDAA
Trigger: TGCTGCATCGTCAGCATCCCATTTGCATACGAGTGC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTGGTCACAGGCTCAACTaGGTGATTTGCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVGHRLN*VICSGR
Trigger: CCTCCCACTGCAAATCACCCAGTTGAGCCTGTGACC...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGGGCATCATAACTGTTaGGCATTGGAGAAGCACTGC +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCGHHNC*ALEKHC
Trigger: GCAGTGCTTCTCCAATGCCCAACAGTTATGATGCCC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCGTAGAGGGAAATCCCTaGGACGCAACAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSVEGNP*DATEEL
Trigger: CAGCTCTTCTGTTGCGTCTCAGGGATTTCCCTCTAC...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCAGGCAGAGAGGGATATaGAACACTAGGATACGCGGC +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSRQRGI*NTRIRG
Trigger: GCCGCGTATCCTAGTGTTTCATATCCCTCTCTGCCT...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCCGGATGAGATTGTCTTaGGTCGATGGAAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSRMRLS*VDGRPG
Trigger: TCCAGGCCTTCCATCGACTCAAGACAATCTCATCCG...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGAAGGTAACTGTGTCTaGAATACAGACACACGGCCA +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCEGNCV*NTDTRP
Trigger: TGGCCGTGTGTCTGTATTTCAGACACAGTTACCTTC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCCCTGAAAGACTTTGCTaGTGGTGGTGCTGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCPERLC*WWCCCD
Trigger: ATCACAACAGCACCACCAGCAGCAAAGTCTTTCAGG...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTAGAGCTGTCAACACCTaGTTCCTCATCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVRAVNT*FLILLL
Trigger: GAGGAGGAGGATGAGGAAGCAGGTGTTGACAGCTCT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGATCAGGAGCAGGACTaGTTGCTGATGAAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCDQEQD*LLMKKA
Trigger: TGCTTTCTTCATCAGCAAGCAGTCCTGCTCCTGATC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCAAGCCTCAGACAGAGTaGTGTGCGTTGCATCTTGTA +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCKPQTE*CALHLV
Trigger: TACAAGATGCAACGCACAGCACTCTGTCTGAGGCTT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGGAAAGATCCTAGAGTaGATCCCACAATATGAGGGG +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCGKILE*IPQYEG
Trigger: CCCCTCATATTGTGGGATCCACTCTAGGATCTTTCC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGACGATGCAGCACCTTaGAAAGATCCTAGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCDDAAP*KDPRVD
Trigger: ATCCACTCTAGGATCTTTCCAAGGTGCTGCATCGTC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCAGGTGGAAGTGGCGATaGATGGCTGATAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCRWKWR*MADSCI
Trigger: AATACAGCTATCAGCCATCCATCGCCACTTCCACCT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCCCACTGGGCTGGACTTaGGAGGCTGAACATTTTGCA +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSPLGWT*EAEHFA
Trigger: TGCAAAATGTTCAGCCTCCCAAGTCCAGCCCAGTGG...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTTGGATACCACTGGGCTaGACTTGGGAGGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVWIPLG*TWEAEH
Trigger: ATGTTCAGCCTCCCAAGTCCAGCCCAGTGGTATCCA...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCACCAGGCTGAAGTGTTaGATAGCCATAGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCTRLKC*IAIAKR
Trigger: CCTTTTGGCTATGGCTATCCAACACTTCAGCCTGGT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGGTACCAATGCCTTTTaGCATCTCTTGCCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCGTNAF*HLLPEF
Trigger: GAACTCTGGCAAGAGATGCCAAAAGGCATTGGTACC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGTGAGCCACCGCGCCTaGCCTGATTCATATATATTA +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCVSHRA*PDSYIL
Trigger: TAATATATATGAATCAGGCCAGGCGCGGTGGCTCAC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTGGTATCCAATGGCAATaGGGTCATTTTCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVGIQWQ*GHFPRS
Trigger: GGACCTGGGAAAATGACCTCATTGCCATTGGATACC...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCATGCAAATGGGATGCTaGCGATGCAGCACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSMQMGC*RCSTLE
Trigger: TTCCAAGGTGCTGCATCGTCAGCATCCCATTTGCAT...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCTCCTATTCTTGTTCGTaGATCTCCAGGAAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCSYSCS*ISRKLV
Trigger: GACAAGCTTCCTGGAGATTCACGAACAAGAATAGGA...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAAGAGAGGAAACAACTTaGGGGAGCTGGGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLREETT*GSWAPS
Trigger: TGATGGCGCCCAGCTCCCTCAAGTTGTTTCCTCTCT...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTTTTGCCAGCTTGCAATaGACAGAGCACTGTACTGCC +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVFASLQ*TEHCTA
Trigger: GGCAGTACAGTGCTCTGTTCATTGCAAGCTGGCAAA...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCTGCTGTGCTCCTGGTTaGTGGTTCACTGTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSCCAPG*WFTVLG
Trigger: TCCTAACACAGTGAACCAGCAACCAGGAGCACAGCA...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCGCATATCTGGGTAACTaGCTCCTTCCAGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSAYLGN*LLPGHH
Trigger: ATGATGCCCTGGAAGGAGGCAGTTACCCAGATATGC...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCATAACACGGTACCAATaGCTTTTGGCATCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCITRYQ*LLASLA
Trigger: GGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTAT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTGTGATCTTAGCTCACTaGAACCTCAGCCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVVILAH*NLSLQV
Trigger: AACCTGGAGGCTGAGGTTGCAGTGAGCTAAGATCAC...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCAAAGAGGAGTATGGTTaGGAGGCACTCGTATGCAAA +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCKEEYG*EALVCK
Trigger: TTTGCATACGAGTGCCTCCCAACCATACTCCTCTTT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGGCAGAGTACATGGCTaGACTATTGTAGTGATTCAC +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCGRVHG*TIVVIH
Trigger: GTGAATCACTACAATAGTCCAGCCATGTACTCTGCC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCATAACTGTTGGGCATTaGAGAAGCACTGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCITVGH*RSTACG
Trigger: ACCACAAGCAGTGCTTCTCCAATGCCCAACAGTTAT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCTCAATCCTCCTATACTaGAGGATAGCTGGTTCACAC +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCSILLY*RIAGSH
Trigger: GTGTGAACCAGCTATCCTCCAGTATAGGAGGATTGA...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCACCCTGCAGAATACTTaGACATGCAAGCTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCTLQNT*TCKLEK
Trigger: CTTCTCTAGCTTGCATGTCCAAGTATTCTGCAGGGT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCTTGCCAGAAGGCAGATaGCAGCTTGTACATCCACTC +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSLPEGR*QLVHPL
Trigger: GAGTGGATGTACAAGCTGCCATCTGCCTTCTGGCAA...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAGATGGAACCTGCATTTaGTTCTGGGCTGGACCGTTC +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLDGTCI*FWAGPF
Trigger: GAACGGTCCAGCCCAGAATCAAATGCAGGTTCCATC...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTCTGGACTTGGGAGGCTaGACATTTTGCATAACAGGA +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVLDLGG*TFCITG
Trigger: TCCTGTTATGCAAAATGTTCAGCCTCCCAAGTCCAG...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAACAGGCTCAACTGGGTaGTTTGCAGTGGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLTGSTG*FAVGGV
Trigger: AACACCTCCCACTGCAAATCACCCAGTTGAGCCTGT...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTCCACCGCGCCTGGCCTaGTTCATATATATTACTAAC +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVPPRLA*FIYITN
Trigger: GTTAGTAATATATATGAATCAGGCCAGGCGCGGTGG...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTATGGTCAGGCAGGTCATaGACACCTGACCTCAAGTCA +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLWSGRS*TPDLKS
Trigger: TGACTTGAGGTCAGGTGTTCATGACCTGCCTGACCA...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAGCTGTACAACTGCTGTaGTCCTGGTTGCTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLAVQLL*SWLLVH
Trigger: GTGAACCAGCAACCAGGAGCACAGCAGTTGTACAGC...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTAAGGAACAAATCCACTaGAGTTTGCTGTCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVKEQIH*SLLSRA
Trigger: TGCTCGGGACAGCAAACTGCAGTGGATTTGTTCCTT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCTCTTCAATTGACAACTaGACCGCAAATCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCSSIDN*TANPAS
Trigger: TGATGCTGGATTTGCGGTGCAGTTGTCAATTGAAGA...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCGAAAGACTTTGCTGCTaGTGGTGCTGTTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSERLCC*WCCCDG
Trigger: ACCATCACAACAGCACCACCAGCAGCAAAGTCTTTC...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGGCATTAGAAACAGTTaGCATAGCATAATGACCACA +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCGIRNS*HSIMTT
Trigger: TGTGGTCATTATGCTATGTCAACTGTTTCTAATGCC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTAGTCGGAGCATTCTGTaGGGTAAACATTTGCCCATA +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVSRSIL*GKHLPI
Trigger: TATGGGCAAATGTTTACCTCACAGAATGCTCCGACT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCGGTTGTGGAGAACTCTaGAGACTCAATCCTCCTATA +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSGCGEL*RLNPPI
Trigger: TATAGGAGGATTGAGTCTTCAGAGTTCTCCACAACC...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTACGCAGCATGTAATCTaGAGAAGCAATGAACTCCAC +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVTQHVI*RSNELH
Trigger: GTGGAGTTCATTGCTTCTTCAGATTACATGCTGCGT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCTCTGCAGACAATTTTTaGAGAGGTGGCTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSSADNF*RGGCGT
Trigger: TGTACCACAGCCACCTCTTCAAAAATTGTCTGCAGA...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCTCTCACGCGCTTCTCTaGCAGATTATGCTTTACCTA +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSSHALL*QIMLYL
Trigger: TAGGTAAAGCATAATCTGTCAGAGAAGCGCGTGAGA...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTATGGGAGGCACTCGTATaGAAATGGGATGCTGACGAT +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLWEALV*KWDADD
Trigger: ATCGTCAGCATCCCATTTGCATACGAGTGCCTCCCA...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTTATCCTGAAAGACTTTaGTGCTGGTGGTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVYPERL*CWWCCC
Trigger: ACAACAGCACCACCAGCAGCAAAGTCTTTCAGGATA...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTAACAAACAAGTAAACTaGAGGTTGAGGAGGACGCAG +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVNKQVN*RLRRTQ
Trigger: CTGCGTCCTCCTCAACCTGCAGTTTACTTGTTTGTT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAGGATCTTCTCTGGATTaGAGAAGTCCTGCACCCAAG +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLGSSLD*RSPAPK
Trigger: CTTGGGTGCAGGACTTCTGCAATCCAGAGAAGATCC...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCTTCTCCGCTCACCTTTaGTTGATGTATATAATAGGG +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCFSAHL*LMYIIG
Trigger: CCCTATTATATACATCAAGCAAAGGTGAGCGGAGAA...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCTCTTGTCAGCTTCTCTaGAGACAATTTTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCSCQLL*RQFLKR
Trigger: CCTCTTCAAAAATTGTCTGCAGAGAAGCTGACAAGA...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCCAATCCATATCCAGATaGAACCTGCATTTGATTCTG +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCQSISR*NLHLIL
Trigger: CAGAATCAAATGCAGGTTCCATCTGGATATGGATTG...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTACAACTGCTGTGCTCCTaGTTGCTGGTTCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLQLLCS*LLVHCV
Trigger: AACACAGTGAACCAGCAACCAGGAGCACAGCAGTTG...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTAGCTGGCAGAGTACATaGCTGGACTATTGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVSWQST*LDYCSD
Trigger: ATCACTACAATAGTCCAGCCATGTACTCTGCCAGCT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTATACTGGAGGATAGCTaGTTCACACCAGGATACTGT +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVILEDS*FTPGYC
Trigger: ACAGTATCCTGGTGTGAACCAGCTATCCTCCAGTAT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTACTGTGTGGTTTCGGATaGGATTGTCTTGAGTCGATG +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLLCGFG*DCLESM
Trigger: CATCGACTCAAGACAATCTCATCCGAAACCACACAG...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCATTGCGTTAGGTCTCTaGAGGGATGTAACAACAATC +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSIALGL*RDVTTI
Trigger: GATTGTTGTTACATCCCTTCAGAGACCTAACGCAAT...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCCATTTCCATCTACGTTaGTCAATGAAGGATACAAAG +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCHFHLR*SMKDTK
Trigger: CTTTGTATCCTTCATTGATCAACGTAGATGGAAATG...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCAATGAACTCCACAGTTaGATTCTGAACTTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSNELHS*ILNFWS
Trigger: CGACCAGAAGTTCAGAATTCAACTGTGGAGTTCATT...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAGCCATATGCAGACAATaGGTCCACTACAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLAICRQ*VHYSIH
Trigger: GTGAATGCTGTAGTGGACTCATTGTCTGCATATGGC...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCCAAGCACATCCTCTATaGAGTTATTGTCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSQAHPL*SYCHSL
Trigger: AAGGCTGTGACAATAACTTCATAGAGGATGTGCTTG...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCTCAAAATATACTTGGTaGAACAGCATCATCGTTACC +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCSKYTW*NSIIVT
Trigger: GGTAACGATGATGCTGTTTCACCAAGTATATTTTGA...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTACTCAACTGGGTGATTTaGAGTGGGAGGTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLLNWVI*SGRCSC
Trigger: ACAAGAACACCTCCCACTGCAAATCACCCAGTTGAG...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCTGTACCCGTTCTAAATaGTTTCTGTTTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSCTRSK*FLFEKG
Trigger: GCCCTTCTCAAACAGAAAGCATTTAGAACGGGTACA...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTTTCATAGTAAGAAAATaGAGCCTCTGTCCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVFIVRK*SLCPVF
Trigger: GAAGACCGGACAGAGGCTGCATTTTCTTACTATGAA...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTAACAGAGCACTGTACTaGCATACTACTGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVNRALY*HTTGNV
Trigger: CACATTTCCAGTAGTATGGCAGTACAGTGCTCTGTT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCAGTCACATTTTGTGTTaGTACTGTATAGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCSHILC*YCIESR
Trigger: TCTGCTCTCTATACAGTACCAACACAAAATGTGACT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTACACAAAAGAGGAGTATaGTTGGGAGGCACTCGTATG +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLHKRGV*LGGTRM
Trigger: CATACGAGTGCCTCCCAACCATACTCCTCTTTTGTG...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAAGACTTTGCTGCTGGTaGTGCTGTTGTGATGGTAGA +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLRLCCW*CCCDGR
Trigger: TCTACCATCACAACAGCACCACCAGCAGCAAAGTCT...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCGGTGCGGAGCTAGCTTaGTTATTAACATATTCACCA +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSGAELA*LLTYSP
Trigger: TGGTGAATATGTTAATAACCAAGCTAGCTCCGCACC...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTTTGAAGAGGTGGCTGTaGTACAATCCTGTCATTAAC +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVLKRWL*YNPVIN
Trigger: GTTAATGACAGGATTGTACCACAGCCACCTCTTCAA...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTCAATTTTTGAAGAGGTaGCTGTGGTACAATCCTGTC +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVQFLKR*LWYNPV
Trigger: GACAGGATTGTACCACAGCCACCTCTTCAAAAATTG...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGTACTGCCATACTACTaGAAATGTGTAGAAACCAAT +
Preference number: 4 (lower is better)
Translates to: FTKASDRVLCVASCINKCVLPYY*KCVETN
Trigger: ATTGGTTTCTACACATTTCCAGTAGTATGGCAGTAC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTGTGAAAAGTGTGCATTaGAAGACCTTTAGTACACCT +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVVKSVH*KTFSTP
Trigger: AGGTGTACTAAAGGTCTTTCAATGCACACTTTTCAC...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCTCCAGAAATAAGTGGTaGTGTAGCATTCTGATAACC +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSSRNKW*CSILIT
Trigger: GGTTATCAGAATGCTACAGCACCACTTATTTCTGGA...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTATAATAGATGCACCCTaGAGAATACTTGGACATGCA +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVIIDAP*RILGHA
Trigger: TGCATGTCCAAGTATTCTGCAGGGTGCATCTATTAT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTGCCATCAATGCAGAGTaGTGTAAATTTGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVAINAE*CKFETV
Trigger: AACTGTCTCAAATTTACAGCACTCTGCATTGATGGC...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTACCTTTTGGCATCTCTTaGCAGAGTTCAAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLPFGIS*QSSSPE
Trigger: TTCTGGACTTGAACTCTGGCAAGAGATGCCAAAAGG...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTATGCAACAGTAATGGTTaGGTTGTTGTTCGCTACAGC +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLCNSNG*VVVRYS
Trigger: GCTGTAGCGAACAACAACCCAACCATTACTGTTGCA...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAATCCTGATAAAACAGTaGATACCACTGGGCTGGACT +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLILIKQ*IPLGWT
Trigger: AGTCCAGCCCAGTGGTATCCACTGTTTTATCAGGAT...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTACAGGCTTTCTGGTTGTaGAGAACTCTGAAGACTCAA +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLQAFWL*RTLKTQ
Trigger: TTGAGTCTTCAGAGTTCTCCACAACCAGAAAGCCTG...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCATCGGCACCTCACAATaGTATTTGATGTTATCACTG +
Preference number: 4 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSIGTSQ*YLMLSL
Trigger: CAGTGATAACATCAAATACCATTGTGAGGTGCCGAT...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTAATCTGAAGAAGCAATaGACTCCACAGTTGAATTCT +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVNLKKQ*TPQLNS
Trigger: AGAATTCAACTGTGGAGTTCATTGCTTCTTCAGATT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTTTTGTACTTGATCTCTaGTTAGGATCTTCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVFVLDL*LGSSLD
Trigger: ATCCAGAGAAGATCCTAATCAGAGATCAAGTACAAA...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTACCCAATTTTTCTTGTaGGATACCGTTTTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVTQFFL*DTVLGL
Trigger: AAGACCTAAAACGGTATCTCACAAGAAAAATTGGGT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTCTTATAAAAATCAGTTaGAGGGCCAAGATGTTGTAC +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVLIKIS*RAKMLY
Trigger: GTACAACATCTTGGCCCTGCAACTGATTTTTATAAG...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAAAATCCACTGCAGTTTaGTGTCCCGAGCAATCTAAT +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLKSTAV*CPEQSN
Trigger: ATTAGATTGCTCGGGACAGCAAACTGCAGTGGATTT...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTATGGATAATAATAGATaGACCCTGCAGAATACTTGG +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVMDNNR*TLQNTW
Trigger: CCAAGTATTCTGCAGGGTGCATCTATTATTATCCAT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTACTTTATCTGACACATaGCATATACACGATCATCCA +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVTLSDT*HIHDHP
Trigger: TGGATGATCGTGTATATGCCATGTGTCAGATAAAGT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
3UTR CAA 72 bp TACTTTTTACCAAAGCCTCAGACAGAGTGCTGTGCGTaGCATCTTGTATTAACAAATGCCTTCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: YFLPKPQTECCA*HLVLTNAFISN
Trigger: ATTTGAAATGAAGGCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAAAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
3UTR CAA 72 bp AATTCATATAAACAAATAACACGGTACCAATGCCTTTaGGCATCTCTTGCCAGAGTTCAAGTCCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: NSYKQITRYQCL*ASLARVQVQKC
Trigger: ACATTTCTGGACTTGAACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTATTGAGAGTAATGTCCTaGGGGAGCAATATAGTTTTG +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLLRVMS*GSNIVL
Trigger: CAAAACTATATTGCTCCCTCAGGACATTACTCTCAA...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAAAAATATTCCTCTCCTaGGTAAGGTTTACAGGTCTC +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLKIFLS*VRFTGL
Trigger: GAGACCTGTAAACCTTACTCAGGAGAGGAATATTTT...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTATGCTATCAAAGGTCATaGATCCTATTCTTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLCYQRS*ILFLFV
Trigger: CACGAACAAGAATAGGATTCATGACCTTTGATAGCA...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR TCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAGACACAATCAACATTTaGGGCTGTGATAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLDTINI*GCDNPS
Trigger: AGAAGGATTATCACAGCCTCAAATGTTGATTGTGTC...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTACATATTCACCATACTaGACGCCTTTTTGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: SYKQITRYQCLLASLARVTYSPY*TPFCCN
Trigger: ATTACAACAAAAAGGCGTGCAGTATGGTGAATATGT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAGTCATTAACATGTACTaGACCCTCATCTGTCAATCT +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLVINMY*TLICQS
Trigger: AGATTGACAGATGAGGGTGCAGTACATGTTAATGAC...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAGAAATGCAGTATCACTaGACTTCCCCAATTAGTAAA +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLEMQYH*TSPISK
Trigger: TTTACTAATTGGGGAAGTGCAGTGATACTGCATTTC...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR GCA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTACTCTATAGCACAAATTaGATTTCCATCTACGTTGAT +
Preference number: 4 (lower is better)
Translates to: CVPLWTQFIICISQPHSLLYSTN*ISIYVD
Trigger: ATCAACGTAGATGGAAATGCAATTTGTGCTATAGAG...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS CCA 90 bp CGACATGACGGCGCTGGTGGCGACGGCGGCTCCGCTTCAGGGAGGTaGGCGGAGGGAAGGGAAGGCGGGGCCGGAGAGGAGAGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: RHDGAGGDGGSASGR*AEGREGGAGEERGR
Trigger: TCTTCCTCTCTCCTCTCCGGCCCCGCCTTCCCTTCCCTCCGCCCACCTCCCTGAAGCGGAGCCGCCGTCGCCACCAGCGCCGTCATGTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504968.6
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGCCGCTCCGCCGAACTaGGGCGGGATCCGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCAAPPN*GGIRAL
Trigger: CAGCGCCCGGATCCCGCCCAAGTTCGGCGGAGCGGC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS TCA 90 bp GACGATGCAGCACCTTGGAAAGATCCTAGAGTGGATCCCACAATATaGGGGGCAGGAGGACCCCTGCTGTACAACTGCTGTGCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: DDAAPWKDPRVDPTI*GAGGPLLYNCCAPG
Trigger: ACCAGGAGCACAGCAGTTGTACAGCAGGGGTCCTCCTGCCCCTCATATTGTGGGATCCACTCTAGGATCTTTCCAAGGTGCTGCATCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS GCA 90 bp GAGCAGAAGCAGGATCAGGTTCAGGGGCGGGATCAGGAGCAGGACTaGTTGCTGATGAAGAAAGCATATCTGGGTAACTGCCTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: EQKQDQVQGRDQEQD*LLMKKAYLGNCLLP
Trigger: TGGAAGGAGGCAGTTACCCAGATATGCTTTCTTCATCAGCAAGCAGTCCTGCTCCTGATCCCGCCCCTGAACCTGATCCTGCTTCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS TCA 90 bp TTGGGTTGTTGTTCGCTACAGCCAGGGATCCTGTGTGGTTTCGGATaGGATTGTCTTGAGTCGATGGAAGGCCTGGAGATGACCACGTTA +
Preference number: 5 (lower is better)
Translates to: LGCCSLQPGILCGFG*DCLESMEGLEMTTL
Trigger: TAACGTGGTCATCTCCAGGCCTTCCATCGACTCAAGACAATCTCATCCGAAACCACACAGGATCCCTGGCTGTAGCGAACAACAACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 90 bp ATCTGGGTAACTGCCTCCTTCCAGGGCATCATAACTGTTGGGCATTaGAGAAGCACTGCTTGTGGTAGAAGAGCTGTCAACACCTGCTTC +
Preference number: 5 (lower is better)
Translates to: IWVTASFQGIITVGH*RSTACGRRAVNTCF
Trigger: GAAGCAGGTGTTGACAGCTCTTCTACCACAAGCAGTGCTTCTCCAATGCCCAACAGTTATGATGCCCTGGAAGGAGGCAGTTACCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265175.5
ENST00000504968.6
CDS TCA 90 bp TTCGCTACAGCCAGGGATCCTGTGTGGTTTCGGATGAGATTGTCTTaGGTCGATGGAAGGCCTGGAGATGACCACGTTAGAGTACTGTAT +
Preference number: 5 (lower is better)
Translates to: FATARDPVWFRMRLS*VDGRPGDDHVRVLY
Trigger: ATACAGTACTCTAACGTGGTCATCTCCAGGCCTTCCATCGACTCAAGACAATCTCATCCGAAACCACACAGGATCCCTGGCTGTAGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 90 bp GGGAAATCCCTGAGACGCAACAGAAGAGCTGGCAGAGTACATGGCTaGACTATTGTAGTGATTCACAAAAGAGGAGTATGGTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: GKSLRRNRRAGRVHG*TIVVIHKRGVWLGG
Trigger: GCCTCCCAACCATACTCCTCTTTTGTGAATCACTACAATAGTCCAGCCATGTACTCTGCCAGCTCTTCTGTTGCGTCTCAGGGATTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS TCA 90 bp AATAGCTCTGATGGCTGTGTAACTGAGGTCACAGGCTCAACTGGGTaGTTTGCAGTGGGAGGTGTTCTTGTTGATGAGGATCCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: NSSDGCVTEVTGSTG*FAVGGVLVDEDPED
Trigger: ATCCTCAGGATCCTCATCAACAAGAACACCTCCCACTGCAAATCACCCAGTTGAGCCTGTGACCTCAGTTACACAGCCATCAGAGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 90 bp ATCTGGGTAACTGCCTCCTTCCAGGGCATCATAACTGTTGGGCATTaGAGAAGCACTGCTTGTGGTAGAAGAGCTGTCAACACCTTTTTG +
Preference number: 5 (lower is better)
Translates to: IWVTASFQGIITVGH*RSTACGRRAVNTFL
Trigger: CAAAAAGGTGTTGACAGCTCTTCTACCACAAGCAGTGCTTCTCCAATGCCCAACAGTTATGATGCCCTGGAAGGAGGCAGTTACCCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399100.6
CDS CCA 90 bp GGCTTTCTGGTTGTGGAGAACTCTGAAGACTCAATCCTCCTATACTaGAGGATAGCTGGTTCACACCAGGATACTGTTGAGGATACTGCT +
Preference number: 5 (lower is better)
Translates to: GFLVVENSEDSILLY*RIAGSHQDTVEDTA
Trigger: AGCAGTATCCTCAACAGTATCCTGGTGTGAACCAGCTATCCTCCAGTATAGGAGGATTGAGTCTTCAGAGTTCTCCACAACCAGAAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265175.5
ENST00000399100.6
CDS CCA 90 bp GGCTTTCTGGTTGTGGAGAACTCTGAAGACTCAATCCTCCTATACTaGAGGATAGCTGGTTCACACCAGGATATTGAGGATACTGCTGGA +
Preference number: 5 (lower is better)
Translates to: GFLVVENSEDSILLY*RIAGSHQDIEDTAG
Trigger: TCCAGCAGTATCCTCAATATCCTGGTGTGAACCAGCTATCCTCCAGTATAGGAGGATTGAGTCTTCAGAGTTCTCCACAACCAGAAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504968.6
CDS TCA 90 bp GGTACAGGAGCCCAAACAGGAGTCATAGGTAAAATATTCCTCTCCTaGGTAAGGTTTACAGGTCTCAGGCTTTCTGGTTGTGGAGAACTC +
Preference number: 5 (lower is better)
Translates to: GTGAQTGVIGKIFLS*VRFTGLRLSGCGEL
Trigger: GAGTTCTCCACAACCAGAAAGCCTGAGACCTGTAAACCTTACTCAGGAGAGGAATATTTTACCTATGACTCCTGTTTGGGCTCCTGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS GCA 90 bp AGAGCCACAGTCCATAAGGAAAGCACCTTCTCTTGTCAGCTTCTCTaGAGACAATTTTTGAAGAGGTGGCTGTGGTACAATCCTGTCATT +
Preference number: 5 (lower is better)
Translates to: RATVHKESTFSCQLL*RQFLKRWLWYNPVI
Trigger: AATGACAGGATTGTACCACAGCCACCTCTTCAAAAATTGTCTGCAGAGAAGCTGACAAGAGAAGGTGCTTTCCTTATGGACTGTGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCAGATGGAACCTGCATTaGATTCTGGGCTGGACCGTT +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCRWNLH*ILGWTV
Trigger: AACGGTCCAGCCCAGAATCAAATGCAGGTTCCATCT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGTAATGGTTGGGTTGTaGTTCGCTACAGCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCVMVGL*FATARD
Trigger: ATCCCTGGCTGTAGCGAACAACAACCCAACCATTAC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCCCTCATCATCGGAAGTaGATGACAAGGGAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCPHHRK*MTRELV
Trigger: CACCAACTCCCTTGTCATCAACTTCCGATGATGAGG...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCCAAGTAAACTGCAGGTaGAGGAGGACGCAGCATGTA +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCQVNCR*RRTQHV
Trigger: TACATGCTGCGTCCTCCTCAACCTGCAGTTTACTTG...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCAGGATCTTCTCTGGATaGCAGAAGTCCTGCACCCAA +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCRIFSG*QKSCTQ
Trigger: TTGGGTGCAGGACTTCTGCAATCCAGAGAAGATCCT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTGATCCACAGCCATGTTaGCCAGAAGGCAGATGGCAG +
Preference number: 5 (lower is better)
Translates to: SYKQITRYQCLLASLARVDPQPC*PEGRWQ
Trigger: CTGCCATCTGCCTTCTGGCAAACATGGCTGTGGATC...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGGAAAGCACCTTCTCTaGTCAGCTTCTCTGCAGACA +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCGKHLL*SASLQT
Trigger: TGTCTGCAGAGAAGCTGACAAGAGAAGGTGCTTTCC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS TCA 90 bp GATCCTGATAAAACAGTGGATACCACTGGGCTGGACTTGGGAGGCTaGACATTTTGCATAACAGGACAGGATAAAGAATCTGCAACAGTA +
Preference number: 5 (lower is better)
Translates to: DPDKTVDTTGLDLGG*TFCITGQDKESATV
Trigger: TACTGTTGCAGATTCTTTATCCTGTCCTGTTATGCAAAATGTTCAGCCTCCCAAGTCCAGCCCAGTGGTATCCACTGTTTTATCAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS-3UTR CAA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCTCGGATGAGATTGTCTaGAGTCGATGGAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSSDEIV*SRWKAW
Trigger: CCAGGCCTTCCATCGACTCAAGACAATCTCATCCGA...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCCAGGAGCAGGACTGCTaGCTGATGAAGAAAGCATAT +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCQEQDC*LMKKAY
Trigger: ATATGCTTTCTTCATCAGCAAGCAGTCCTGCTCCTG...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTAAGGCAGATGGCAGCTaGTACATCCACTCCCGCATA +
Preference number: 5 (lower is better)
Translates to: SYKQITRYQCLLASLARVKADGS*YIHSRI
Trigger: TATGCGGGAGTGGATGTACAAGCTGCCATCTGCCTT...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTACTGCTGTGCTCCTGGTaGCTGGTTCACTGTGTTAGG +
Preference number: 5 (lower is better)
Translates to: CVPLWTQFIICISQPHSLLLCSW*LVHCVR
Trigger: CCTAACACAGTGAACCAGCAACCAGGAGCACAGCAG...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCACAGTAATGGTTGGGTaGTTGTTCGCTACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSTVMVG*LFATAR
Trigger: CCTGGCTGTAGCGAACAACAACCCAACCATTACTGT...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTCATAACTGTTGGGCATaGGAGAAGCACTGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SYKQITRYQCLLASLARVHNCWA*EKHCLW
Trigger: CCACAAGCAGTGCTTCTCCAATGCCCAACAGTTATG...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCAATCCAGCATCAGGATaGATGTTGGCAAGGGATAAC +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCNPASG*MLARDN
Trigger: GTTATCCCTTGCCAACATCAATCCTGATGCTGGATT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCTCACTAAGGCATCTCTaGCATCTGACAGACTTGATG +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCSLRHL*HLTDLM
Trigger: CATCAAGTCTGTCAGATGCAAGAGATGCCTTAGTGA...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS TCA 90 bp ATAAGGAAAGCACCTTCTCTTGTCAGCTTCTCTGCAGACAATTTTTaGAGAGGTGGCTGTGGTACAATCCTGTCATTAACATGTACTGCA +
Preference number: 5 (lower is better)
Translates to: IRKAPSLVSFSADNF*RGGCGTILSLTCTA
Trigger: TGCAGTACATGTTAATGACAGGATTGTACCACAGCCACCTCTTCAAAAATTGTCTGCAGAGAAGCTGACAAGAGAAGGTGCTTTCCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 90 bp TCATCATCGGAAGTTGATGACAAGGGAGTTGGTGCGGAGCTAGCTTaGTTATTAACATATTCACCATACTGCACGCCTTTTTGTTGTAAT +
Preference number: 5 (lower is better)
Translates to: SSSEVDDKGVGAELA*LLTYSPYCTPFCCN
Trigger: ATTACAACAAAAAGGCGTGCAGTATGGTGAATATGTTAATAACCAAGCTAGCTCCGCACCAACTCCCTTGTCATCAACTTCCGATGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265175.5
ENST00000504968.6
CDS-3UTR CAA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTACAGTGGGAGGTGTTCTaGTTGATGAGGATCCTGAGG +
Preference number: 5 (lower is better)
Translates to: CVPLWTQFIICISQPHSLQWEVF*LMRILR
Trigger: CCTCAGGATCCTCATCAACAAGAACACCTCCCACTG...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTCACCCTGCAGAATACTaGGACATGCAAGCTAGAGAA +
Preference number: 5 (lower is better)
Translates to: SYKQITRYQCLLASLARVHPAEY*DMQARE
Trigger: TTCTCTAGCTTGCATGTCCAAGTATTCTGCAGGGTG...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTTTGCATCTGACAGACTaGATGAAACGGACCGATCCA +
Preference number: 5 (lower is better)
Translates to: SYKQITRYQCLLASLARVLHLTD*MKRTDP
Trigger: TGGATCGGTCCGTTTCATCAAGTCTGTCAGATGCAA...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCCTCTGCAGACAATTTTaGAAGAGGTGGCTGTGGTAC +
Preference number: 5 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSLCRQF*KRWLWY
Trigger: GTACCACAGCCACCTCTTCAAAAATTGTCTGCAGAG...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCTGGTGCGGAGCTAGCTaGGTTATTAACATATTCACC +
Preference number: 5 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSWCGAS*VINIFT
Trigger: GGTGAATATGTTAATAACCAAGCTAGCTCCGCACCA...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTACACACCAGGATACTGTaGAGGATACTGCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: CVPLWTQFIICISQPHSLHTRIL*RILLES
Trigger: GGATTCCAGCAGTATCCTCAACAGTATCCTGGTGTG...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTTCCGCTCACCTTTGCTaGATGTATATAATAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SYKQITRYQCLLASLARVSAHLC*MYIIGL
Trigger: CAGCCCTATTATATACATCAAGCAAAGGTGAGCGGA...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCATTCTCCGCTCACCTTaGCTTGATGTATATAATAGG +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCILRSP*LDVYNR
Trigger: CCTATTATATACATCAAGCAAAGGTGAGCGGAGAAT...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGTAAATTTGAGACAGTaGAGCCATATGCAGACAATG +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCVNLRQ*SHMQTM
Trigger: CATTGTCTGCATATGGCTCAACTGTCTCAAATTTAC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCCATAGCTACATAAATTaGCCAGCTTGCAATGAACAG +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCHSYIN*PACNEQ
Trigger: CTGTTCATTGCAAGCTGGCAAATTTATGTAGCTATG...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAGCCTTTTGGCATCTCTaGCCAGAGTTCAAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: CVPLWTQFIICISQPHSLAFWHL*PEFKSR
Trigger: TCTGGACTTGAACTCTGGCAAGAGATGCCAAAAGGC...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTACGGTACCAATGCCTTTaGGCATCTCTTGCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: CVPLWTQFIICISQPHSLRYQCL*ASLARV
Trigger: AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCG...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS GCA 90 bp CTTGTGAAGGATTGTGAGTATAGTGGAATGATGGATAATAATAGATaGACCCTGCAGAATACTTGGACATGCAAGCTAGAGAAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: LVKDCEYSGMMDNNR*TLQNTWTCKLEKQD
Trigger: ATCTTGCTTCTCTAGCTTGCATGTCCAAGTATTCTGCAGGGTGCATCTATTATTATCCATCATTCCACTATACTCACAATCCTTCACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS-3UTR CAA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTGAGTCACATTTTGTGTaGGTACTGTATAGAGAGCAG +
Preference number: 5 (lower is better)
Translates to: SYKQITRYQCLLASLARVESHFV*VLYREQ
Trigger: CTGCTCTCTATACAGTACCAACACAAAATGTGACTC...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAAAAAGAGGAGTATGGTaGGGAGGCACTCGTATGCAA +
Preference number: 5 (lower is better)
Translates to: CVPLWTQFIICISQPHSLKRGVW*GGTRMQ
Trigger: TTGCATACGAGTGCCTCCCAACCATACTCCTCTTTT...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAAACCAGGCTGAAGTGTaGGATAGCCATAGCCAAAAG +
Preference number: 5 (lower is better)
Translates to: CVPLWTQFIICISQPHSLNQAEV*DSHSQK
Trigger: CTTTTGGCTATGGCTATCCAACACTTCAGCCTGGTT...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTATCTCAGGCTTTCTGGTaGTGGAGAACTCTGAAGACT +
Preference number: 5 (lower is better)
Translates to: CVPLWTQFIICISQPHSLSQAFW*WRTLKT
Trigger: AGTCTTCAGAGTTCTCCACAACCAGAAAGCCTGAGA...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTCTCTAACTGTGACAAAAAGAGTTGTCATCCAACAATGCAGCACAGTTTAAGCGAATCTCCAGGAAGCTaGTCTAGATTTTCTAGGAGT +
Preference number: 5 (lower is better)
Translates to: FSNCDKKSCHPTMQHSLSESPGS*SRFSRS
Trigger: ACTCCTAGAAAATCTAGACAAGCTTCCTGGAGATTC...GCTTAAACTGTGCTGCATTGTTGGATGACAACTCTTTTTGTCACAGTTAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTGCATCAGGATTGATGTaGGCAAGGGATAACAAATCA +
Preference number: 5 (lower is better)
Translates to: SYKQITRYQCLLASLARVASGLM*ARDNKS
Trigger: TGATTTGTTATCCCTTGCCAACATCAATCCTGATGC...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCTTAAACTTTCTTCAATaGACAACTGCACCGCAAATC +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCLNFLQ*TTAPQI
Trigger: GATTTGCGGTGCAGTTGTCAATTGAAGAAAGTTTAA...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TTTACCAAAGCCTCAGACAGAGTGCTGTGCGTTGCATCTTGTATTAACAAATGCGAATTACAAAGAGTTTaGTGTTCCTTTGTGGACTCA +
Preference number: 5 (lower is better)
Translates to: FTKASDRVLCVASCINKCELQRV*CSFVDS
Trigger: TGAGTCCACAAAGGAACACAAAACTCTTTGTAATTC...GCATTTGTTAATACAAGATGCAACGCACAGCACTCTGTCTGAGGCTTTGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS GCA 90 bp AAACATACTAAGGAAGTATCTGTTAAACTTTCTTCAATTGACAACTaGACCGCAAATCCAGCATCAGGATTGATGTTGGCAAGGGATAAC +
Preference number: 5 (lower is better)
Translates to: KHTKEVSVKLSSIDN*TANPASGLMLARDN
Trigger: GTTATCCCTTGCCAACATCAATCCTGATGCTGGATTTGCGGTGCAGTTGTCAATTGAAGAAAGTTTAACAGATACTTCCTTAGTATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS-3UTR CAA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTGTTAGGAGTCACATTTaGTGTTGGTACTGTATAGAG +
Preference number: 5 (lower is better)
Translates to: SYKQITRYQCLLASLARVVRSHI*CWYCIE
Trigger: CTCTATACAGTACCAACACAAAATGTGACTCCTAAC...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTTTACTATGTGAAGGATaGGACTTAATGGTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SYKQITRYQCLLASLARVLLCEG*DLMVCC
Trigger: ACAGCAGACCATTAAGTCCAATCCTTCACATAGTAA...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAGTGACTGGCACAAAATaGTCAAATATCCAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: CVPLWTQFIICISQPHSLVTGTK*SNIQLP
Trigger: TGGAAGCTGGATATTTGACAATTTTGTGCCAGTCAC...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TCATATAAACAAATAACACGGTACCAATGCCTTTTGGCATCTCTTGCCAGAGTTTCTTATAAAAATCAGTaGCAGGGCCAAGATGTTGTA +
Preference number: 5 (lower is better)
Translates to: SYKQITRYQCLLASLARVSYKNQ*QGQDVV
Trigger: TACAACATCTTGGCCCTGCAACTGATTTTTATAAGA...AACTCTGGCAAGAGATGCCAAAAGGCATTGGTACCGTGTTATTTGTTTATATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTACACCCCTGGCTAATTTaGGTATTTTTAGCAGAGATG +
Preference number: 5 (lower is better)
Translates to: CVPLWTQFIICISQPHSLHPWLI*VFLAEM
Trigger: CATCTCTGCTAAAAATACCAAAATTAGCCAGGGGTG...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAGGGAGCAATATAGTTTaGATGATGCAATCCATATCC +
Preference number: 5 (lower is better)
Translates to: CVPLWTQFIICISQPHSLGSNIV*MMQSIS
Trigger: GGATATGGATTGCATCATCAAAACTATATTGCTCCC...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS-3UTR CAA 90 bp TGTGTTCCTTTGTGGACTCAATTCATAATATGCATTAGTCAACCTCATTCTCTAGTGTCTGTGGAATATTaGTCAAAGTACACCGAAATG +
Preference number: 5 (lower is better)
Translates to: CVPLWTQFIICISQPHSLVSVEY*SKYTEM
Trigger: CATTTCGGTGTACTTTGACAAATATTCCACAGACAC...TAGAGAATGAGGTTGACTAATGCATATTATGAATTGAGTCCACAAAGGAACACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265175.5
CDS CCA 72 bp GCGCTGCGGCTCCTGAGACGGCCGCTCCGCCGAACTTaGGCGGGATCCGGGCGCTGGCGGCCGGGTGAGAGG +
Preference number: 6 (lower is better)
Translates to: ALRLLRRPLRRT*AGSGRWRPGER
Trigger: CCTCTCACCCGGCCGCCAGCGCCCGGATCCCGCCCAAGTTCGGCGGAGCGGCCGTCTCAGGAGCCGCAGCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS GCA 72 bp GAGTGGATCCCACAATATGAGGGGCAGGAGGACCCCTaGTGTACAACTGCTGTGCTCCTGGTTGCTGGTTCA +
Preference number: 6 (lower is better)
Translates to: EWIPQYEGQEDP*CTTAVLLVAGS
Trigger: TGAACCAGCAACCAGGAGCACAGCAGTTGTACAGCAGGGGTCCTCCTGCCCCTCATATTGTGGGATCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 72 bp ATGCTGACGATGCAGCACCTTGGAAAGATCCTAGAGTaGATCCCACAATATGAGGGGCAGGAGGACCCCTGC +
Preference number: 6 (lower is better)
Translates to: MLTMQHLGKILE*IPQYEGQEDPC
Trigger: GCAGGGGTCCTCCTGCCCCTCATATTGTGGGATCCACTCTAGGATCTTTCCAAGGTGCTGCATCGTCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS TCA 72 bp GCACCTTGGAAAGATCCTAGAGTGGATCCCACAATATaGGGGGCAGGAGGACCCCTGCTGTACAACTGCTGT +
Preference number: 6 (lower is better)
Translates to: APWKDPRVDPTI*GAGGPLLYNCC
Trigger: ACAGCAGTTGTACAGCAGGGGTCCTCCTGCCCCTCATATTGTGGGATCCACTCTAGGATCTTTCCAAGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS GCA 72 bp CAGGATCAGGTTCAGGGGCGGGATCAGGAGCAGGACTaGTTGCTGATGAAGAAAGCATATCTGGGTAACTGC +
Preference number: 6 (lower is better)
Translates to: QDQVQGRDQEQD*LLMKKAYLGNC
Trigger: GCAGTTACCCAGATATGCTTTCTTCATCAGCAAGCAGTCCTGCTCCTGATCCCGCCCCTGAACCTGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 72 bp CGGACCGATCCACAGCCATGTTTGCCAGAAGGCAGATaGCAGCTTGTACATCCACTCCCGCATATACATCTG +
Preference number: 6 (lower is better)
Translates to: RTDPQPCLPEGR*QLVHPLPHIHL
Trigger: CAGATGTATATGCGGGAGTGGATGTACAAGCTGCCATCTGCCTTCTGGCAAACATGGCTGTGGATCGGTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 72 bp GATCAGGTTCAGGGGCGGGATCAGGAGCAGGACTGCTaGCTGATGAAGAAAGCATATCTGGGTAACTGCCTC +
Preference number: 6 (lower is better)
Translates to: DQVQGRDQEQDC*LMKKAYLGNCL
Trigger: GAGGCAGTTACCCAGATATGCTTTCTTCATCAGCAAGCAGTCCTGCTCCTGATCCCGCCCCTGAACCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS TCA 72 bp GCCAGGGATCCTGTGTGGTTTCGGATGAGATTGTCTTaGGTCGATGGAAGGCCTGGAGATGACCACGTTAGA +
Preference number: 6 (lower is better)
Translates to: ARDPVWFRMRLS*VDGRPGDDHVR
Trigger: TCTAACGTGGTCATCTCCAGGCCTTCCATCGACTCAAGACAATCTCATCCGAAACCACACAGGATCCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS TCA 72 bp TGTTCGCTACAGCCAGGGATCCTGTGTGGTTTCGGATaGGATTGTCTTGAGTCGATGGAAGGCCTGGAGATG +
Preference number: 6 (lower is better)
Translates to: CSLQPGILCGFG*DCLESMEGLEM
Trigger: CATCTCCAGGCCTTCCATCGACTCAAGACAATCTCATCCGAAACCACACAGGATCCCTGGCTGTAGCGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 72 bp TTGATGATGCAATCCATATCCAGATGGAACCTGCATTaGATTCTGGGCTGGACCGTTCTGCTGGTGCGGCGC +
Preference number: 6 (lower is better)
Translates to: LMMQSISRWNLH*ILGWTVLLVRR
Trigger: GCGCCGCACCAGCAGAACGGTCCAGCCCAGAATCAAATGCAGGTTCCATCTGGATATGGATTGCATCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265175.5
ENST00000399100.6
CDS GCA 72 bp GGAGGACCCCTGCTGTACAACTGCTGTGCTCCTGGTTaGTGGTTCACTGTGTTAGGAGTCACATTTTGTGTT +
Preference number: 6 (lower is better)
Translates to: GGPLLYNCCAPG*WFTVLGVTFCV
Trigger: AACACAAAATGTGACTCCTAACACAGTGAACCAGCAACCAGGAGCACAGCAGTTGTACAGCAGGGGTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 72 bp GGACCCCTGCTGTACAACTGCTGTGCTCCTGGTTGCTaGTTCACTGTGTTAGGAGTCACATTTTGTGTTGGT +
Preference number: 6 (lower is better)
Translates to: GPLLYNCCAPGC*FTVLGVTFCVG
Trigger: ACCAACACAAAATGTGACTCCTAACACAGTGAACCAGCAACCAGGAGCACAGCAGTTGTACAGCAGGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS TCA 72 bp GATGGCTGTGTAACTGAGGTCACAGGCTCAACTGGGTaGTTTGCAGTGGGAGGTGTTCTTGTTGATGAGGAT +
Preference number: 6 (lower is better)
Translates to: DGCVTEVTGSTG*FAVGGVLVDED
Trigger: ATCCTCATCAACAAGAACACCTCCCACTGCAAATCACCCAGTTGAGCCTGTGACCTCAGTTACACAGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 72 bp AAAGAGGAGTATGGTTGGGAGGCACTCGTATGCAAATaGGATGCTGACGATGCAGCACCTTGGAAAGATCCT +
Preference number: 6 (lower is better)
Translates to: KEEYGWEALVCK*DADDAAPWKDP
Trigger: AGGATCTTTCCAAGGTGCTGCATCGTCAGCATCCCATTTGCATACGAGTGCCTCCCAACCATACTCCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 90 bp AGGTCACAGGCTCAACTGGGTGATTTGCAGTGGGAGGTGTTCTTGTaGATGAGGATCCTGAGGATCCTGATAAAACAGTGGATACCACTG +
Preference number: 6 (lower is better)
Translates to: RSQAQLGDLQWEVFL*MRILRILIKQWIPL
Trigger: CAGTGGTATCCACTGTTTTATCAGGATCCTCAGGATCCTCATCAACAAGAACACCTCCCACTGCAAATCACCCAGTTGAGCCTGTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 90 bp CTGAGGTCACAGGCTCAACTGGGTGATTTGCAGTGGGAGGTGTTCTaGTTGATGAGGATCCTGAGGATCCTGATAAAACAGTGGATACCA +
Preference number: 6 (lower is better)
Translates to: LRSQAQLGDLQWEVF*LMRILRILIKQWIP
Trigger: TGGTATCCACTGTTTTATCAGGATCCTCAGGATCCTCATCAACAAGAACACCTCCCACTGCAAATCACCCAGTTGAGCCTGTGACCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 90 bp GGGAGCTGGGCGCCATCAATGCAGAGTGCTGTAAATTTGAGACAGTaGAGCCATATGCAGACAATGAGTCCACTACAGCATTCACTAAGG +
Preference number: 6 (lower is better)
Translates to: GSWAPSMQSAVNLRQ*SHMQTMSPLQHSLR
Trigger: CCTTAGTGAATGCTGTAGTGGACTCATTGTCTGCATATGGCTCAACTGTCTCAAATTTACAGCACTCTGCATTGATGGCGCCCAGCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS GCA 72 bp TTCACAAAAGAGGAGTATGGTTGGGAGGCACTCGTATaGAAATGGGATGCTGACGATGCAGCACCTTGGAAA +
Preference number: 6 (lower is better)
Translates to: FTKEEYGWEALV*KWDADDAAPWK
Trigger: TTTCCAAGGTGCTGCATCGTCAGCATCCCATTTGCATACGAGTGCCTCCCAACCATACTCCTCTTTTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS GCA 72 bp TACCGGGTTACTGGGCTGTACTCCAGAAATAAGTGGTaGTGTAGCATTCTGATAACCAGGCTGAAGTGTTGG +
Preference number: 6 (lower is better)
Translates to: YRVTGLYSRNKW*CSILITRLKCW
Trigger: CCAACACTTCAGCCTGGTTATCAGAATGCTACAGCACCACTTATTTCTGGAGTACAGCCCAGTAACCCGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS GCA 72 bp AACAACTTGAGGGAGCTGGGCGCCATCAATGCAGAGTaGTGTAAATTTGAGACAGTTGAGCCATATGCAGAC +
Preference number: 6 (lower is better)
Translates to: NNLRELGAINAE*CKFETVEPYAD
Trigger: GTCTGCATATGGCTCAACTGTCTCAAATTTACAGCACTCTGCATTGATGGCGCCCAGCTCCCTCAAGTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 72 bp CAGGATAAAGAATCTGCAACAGTAATGGTTGGGTTGTaGTTCGCTACAGCCAGGGATCCTGTGTGGTTTCGG +
Preference number: 6 (lower is better)
Translates to: QDKESATVMVGL*FATARDPVWFR
Trigger: CCGAAACCACACAGGATCCCTGGCTGTAGCGAACAACAACCCAACCATTACTGTTGCAGATTCTTTATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 72 bp GCTCAACTGGGTGATTTGCAGTGGGAGGTGTTCTTGTaGATGAGGATCCTGAGGATCCTGATAAAACAGTGG +
Preference number: 6 (lower is better)
Translates to: AQLGDLQWEVFL*MRILRILIKQW
Trigger: CCACTGTTTTATCAGGATCCTCAGGATCCTCATCAACAAGAACACCTCCCACTGCAAATCACCCAGTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 72 bp CAGGCTCAACTGGGTGATTTGCAGTGGGAGGTGTTCTaGTTGATGAGGATCCTGAGGATCCTGATAAAACAG +
Preference number: 6 (lower is better)
Translates to: QAQLGDLQWEVF*LMRILRILIKQ
Trigger: CTGTTTTATCAGGATCCTCAGGATCCTCATCAACAAGAACACCTCCCACTGCAAATCACCCAGTTGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 90 bp CTGCTGTGCTCCTGGTTGCTGGTTCACTGTGTTAGGAGTCACATTTaGTGTTGGTACTGTATAGAGAGCAGAGTAGTAATCACCACACTG +
Preference number: 6 (lower is better)
Translates to: LLCSWLLVHCVRSHI*CWYCIESRVVITTL
Trigger: CAGTGTGGTGATTACTACTCTGCTCTCTATACAGTACCAACACAAAATGTGACTCCTAACACAGTGAACCAGCAACCAGGAGCACAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 90 bp CATATGCAGACAATGAGTCCACTACAGCATTCACTAAGGCATCTCTaGCATCTGACAGACTTGATGAAACGGACCGATCCACAGCCATGT +
Preference number: 6 (lower is better)
Translates to: HMQTMSPLQHSLRHL*HLTDLMKRTDPQPC
Trigger: ACATGGCTGTGGATCGGTCCGTTTCATCAAGTCTGTCAGATGCAAGAGATGCCTTAGTGAATGCTGTAGTGGACTCATTGTCTGCATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS TCA 72 bp TTTACAGGTCTCAGGCTTTCTGGTTGTGGAGAACTCTaGAGACTCAATCCTCCTATACTGGAGGATAGCTGG +
Preference number: 6 (lower is better)
Translates to: FTGLRLSGCGEL*RLNPPILEDSW
Trigger: CCAGCTATCCTCCAGTATAGGAGGATTGAGTCTTCAGAGTTCTCCACAACCAGAAAGCCTGAGACCTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 72 bp CTGAGACGCAACAGAAGAGCTGGCAGAGTACATGGCTaGACTATTGTAGTGATTCACAAAAGAGGAGTATGG +
Preference number: 6 (lower is better)
Translates to: LRRNRRAGRVHG*TIVVIHKRGVW
Trigger: CCATACTCCTCTTTTGTGAATCACTACAATAGTCCAGCCATGTACTCTGCCAGCTCTTCTGTTGCGTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 72 bp GTTGTGGAGAACTCTGAAGACTCAATCCTCCTATACTaGAGGATAGCTGGTTCACACCAGGATACTGTTGAG +
Preference number: 6 (lower is better)
Translates to: VVENSEDSILLY*RIAGSHQDTVE
Trigger: CTCAACAGTATCCTGGTGTGAACCAGCTATCCTCCAGTATAGGAGGATTGAGTCTTCAGAGTTCTCCACAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265175.5
ENST00000399100.6
CDS CCA 72 bp CCTCTCCTGAGTAAGGTTTACAGGTCTCAGGCTTTCTaGTTGTGGAGAACTCTGAAGACTCAATCCTCCTAT +
Preference number: 6 (lower is better)
Translates to: PLLSKVYRSQAF*LWRTLKTQSSY
Trigger: ATAGGAGGATTGAGTCTTCAGAGTTCTCCACAACCAGAAAGCCTGAGACCTGTAAACCTTACTCAGGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 72 bp GGACAGGATAAAGAATCTGCAACAGTAATGGTTGGGTaGTTGTTCGCTACAGCCAGGGATCCTGTGTGGTTT +
Preference number: 6 (lower is better)
Translates to: GQDKESATVMVG*LFATARDPVWF
Trigger: AAACCACACAGGATCCCTGGCTGTAGCGAACAACAACCCAACCATTACTGTTGCAGATTCTTTATCCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 72 bp CTGAGTAAGGTTTACAGGTCTCAGGCTTTCTGGTTGTaGAGAACTCTGAAGACTCAATCCTCCTATACTGGA +
Preference number: 6 (lower is better)
Translates to: LSKVYRSQAFWL*RTLKTQSSYTG
Trigger: TCCAGTATAGGAGGATTGAGTCTTCAGAGTTCTCCACAACCAGAAAGCCTGAGACCTGTAAACCTTACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 72 bp CAGCTTCTCTGCAGACAATTTTTGAAGAGGTGGCTGTaGTACAATCCTGTCATTAACATGTACTGCACCCTC +
Preference number: 6 (lower is better)
Translates to: QLLCRQFLKRWL*YNPVINMYCTL
Trigger: GAGGGTGCAGTACATGTTAATGACAGGATTGTACCACAGCCACCTCTTCAAAAATTGTCTGCAGAGAAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 72 bp GTTGTGGAGAACTCTGAAGACTCAATCCTCCTATACTaGAGGATAGCTGGTTCACACCAGGATATTGAGGAT +
Preference number: 6 (lower is better)
Translates to: VVENSEDSILLY*RIAGSHQDIED
Trigger: ATCCTCAATATCCTGGTGTGAACCAGCTATCCTCCAGTATAGGAGGATTGAGTCTTCAGAGTTCTCCACAAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504968.6
CDS CAA 72 bp CTCCTGAGTAAGGTTTACAGGTCTCAGGCTTTCTGGTaGTGGAGAACTCTGAAGACTCAATCCTCCTATACT +
Preference number: 6 (lower is better)
Translates to: LLSKVYRSQAFW*WRTLKTQSSYT
Trigger: AGTATAGGAGGATTGAGTCTTCAGAGTTCTCCACAACCAGAAAGCCTGAGACCTGTAAACCTTACTCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 72 bp ACAATGAGTCCACTACAGCATTCACTAAGGCATCTCTaGCATCTGACAGACTTGATGAAACGGACCGATCCA +
Preference number: 6 (lower is better)
Translates to: TMSPLQHSLRHL*HLTDLMKRTDP
Trigger: TGGATCGGTCCGTTTCATCAAGTCTGTCAGATGCAAGAGATGCCTTAGTGAATGCTGTAGTGGACTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 72 bp GCGCCATCAATGCAGAGTGCTGTAAATTTGAGACAGTaGAGCCATATGCAGACAATGAGTCCACTACAGCAT +
Preference number: 6 (lower is better)
Translates to: APSMQSAVNLRQ*SHMQTMSPLQH
Trigger: ATGCTGTAGTGGACTCATTGTCTGCATATGGCTCAACTGTCTCAAATTTACAGCACTCTGCATTGATGGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 72 bp TTAGATGAACAAGTGGCTGAGACTTTATCTGACACATaGCATATACACGATCATCCAGCCGTGTGCTTGTAC +
Preference number: 6 (lower is better)
Translates to: LDEQVAETLSDT*HIHDHPAVCLY
Trigger: GTACAAGCACACGGCTGGATGATCGTGTATATGCCATGTGTCAGATAAAGTCTCAGCCACTTGTTCATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 72 bp TCAATTGACAACTGCACCGCAAATCCAGCATCAGGATaGATGTTGGCAAGGGATAACAAATCAGTAGAACGG +
Preference number: 6 (lower is better)
Translates to: SIDNCTANPASG*MLARDNKSVER
Trigger: CCGTTCTACTGATTTGTTATCCCTTGCCAACATCAATCCTGATGCTGGATTTGCGGTGCAGTTGTCAATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 90 bp CATAAGGAAAGCACCTTCTCTTGTCAGCTTCTCTGCAGACAATTTTaGAAGAGGTGGCTGTGGTACAATCCTGTCATTAACATGTACTGC +
Preference number: 6 (lower is better)
Translates to: HKESTFSCQLLCRQF*KRWLWYNPVINMYC
Trigger: GCAGTACATGTTAATGACAGGATTGTACCACAGCCACCTCTTCAAAAATTGTCTGCAGAGAAGCTGACAAGAGAAGGTGCTTTCCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS TCA 72 bp ATTATCTTTAACTGGCCTAACAGTCGGAGCATTCTGTaGGGTAAACATTTGCCCATATGTATCACCAGCAGG +
Preference number: 6 (lower is better)
Translates to: IIFNWPNSRSIL*GKHLPICITSR
Trigger: CCTGCTGGTGATACATATGGGCAAATGTTTACCTCACAGAATGCTCCGACTGTTAGGCCAGTTAAAGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 72 bp AGCAATATAGTTTTGATGATGCAATCCATATCCAGATaGAACCTGCATTTGATTCTGGGCTGGACCGTTCTG +
Preference number: 6 (lower is better)
Translates to: SNIVLMMQSISR*NLHLILGWTVL
Trigger: CAGAACGGTCCAGCCCAGAATCAAATGCAGGTTCCATCTGGATATGGATTGCATCATCAAAACTATATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265175.5
ENST00000399100.6
CDS CCA 72 bp TCTCCAGGAAGCTTGTCTAGATTTTCTAGGAGTGACTaGCACAAAATTGTCAAATATCCAGCTTCCACTGCA +
Preference number: 6 (lower is better)
Translates to: SPGSLSRFSRSD*HKIVKYPASTA
Trigger: TGCAGTGGAAGCTGGATATTTGACAATTTTGTGCCAGTCACTCCTAGAAAATCTAGACAAGCTTCCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 72 bp TCCTGGTTGCTGGTTCACTGTGTTAGGAGTCACATTTaGTGTTGGTACTGTATAGAGAGCAGAGTAGTAATC +
Preference number: 6 (lower is better)
Translates to: SWLLVHCVRSHI*CWYCIESRVVI
Trigger: GATTACTACTCTGCTCTCTATACAGTACCAACACAAAATGTGACTCCTAACACAGTGAACCAGCAACCAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS TCA 72 bp CGATGGATGGCTGATAGCTGTATTTTGACCAGAGAATaGATTATCTTTAACTGGCCTAACAGTCGGAGCATT +
Preference number: 6 (lower is better)
Translates to: RWMADSCILTRE*IIFNWPNSRSI
Trigger: AATGCTCCGACTGTTAGGCCAGTTAAAGATAATTCATTCTCTGGTCAAAATACAGCTATCAGCCATCCATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 72 bp AGCAATATAGTTTTGATGATGCAATCCATATCCAGATaGAACCTGCATTTGATTCTGGGCTGGACCTGTACT +
Preference number: 6 (lower is better)
Translates to: SNIVLMMQSISR*NLHLILGWTCT
Trigger: AGTACAGGTCCAGCCCAGAATCAAATGCAGGTTCCATCTGGATATGGATTGCATCATCAAAACTATATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504968.6
CDS CAA 90 bp AAACTTTCTTCAATTGACAACTGCACCGCAAATCCAGCATCAGGATaGATGTTGGCAAGGGATAACAAATCAGTAGAACGGACAAAGAAG +
Preference number: 6 (lower is better)
Translates to: KLSSIDNCTANPASG*MLARDNKSVERTKK
Trigger: CTTCTTTGTCCGTTCTACTGATTTGTTATCCCTTGCCAACATCAATCCTGATGCTGGATTTGCGGTGCAGTTGTCAATTGAAGAAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS TCA 72 bp CAGGACCAAGGGCACTGTGTGTTTCTCTTGTATTGGTaGACATGTTTGGTAATGCATTCAGTAAGTCTTTTA +
Preference number: 6 (lower is better)
Translates to: QDQGHCVFLLYW*TCLVMHSVSLL
Trigger: TAAAAGACTTACTGAATGCATTACCAAACATGTTCACCAATACAAGAGAAACACACAGTGCCCTTGGTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS GCA 72 bp GATTGTGAGTATAGTGGAATGATGGATAATAATAGATaGACCCTGCAGAATACTTGGACATGCAAGCTAGAG +
Preference number: 6 (lower is better)
Translates to: DCEYSGMMDNNR*TLQNTWTCKLE
Trigger: CTCTAGCTTGCATGTCCAAGTATTCTGCAGGGTGCATCTATTATTATCCATCATTCCACTATACTCACAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS GCA 72 bp AAGGAAGTATCTGTTAAACTTTCTTCAATTGACAACTaGACCGCAAATCCAGCATCAGGATTGATGTTGGCA +
Preference number: 6 (lower is better)
Translates to: KEVSVKLSSIDN*TANPASGLMLA
Trigger: TGCCAACATCAATCCTGATGCTGGATTTGCGGTGCAGTTGTCAATTGAAGAAAGTTTAACAGATACTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CCA 72 bp ATGATGGATAATAATAGATGCACCCTGCAGAATACTTaGACATGCAAGCTAGAGAAGCAAGATCAGAATACT +
Preference number: 6 (lower is better)
Translates to: MMDNNRCTLQNT*TCKLEKQDQNT
Trigger: AGTATTCTGATCTTGCTTCTCTAGCTTGCATGTCCAAGTATTCTGCAGGGTGCATCTATTATTATCCATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6
CDS CAA 90 bp AGGAACATCGTTTACTCTATAGCACAAATTGCATTTCCATCTACGTaGATCAATGAAGGATACAAAGGGGTTAATATACGTTCGACAGGA +
Preference number: 6 (lower is better)
Translates to: RNIVYSIAQIAFPST*INEGYKGVNIRSTG
Trigger: TCCTGTCGAACGTATATTAACCCCTTTGTATCCTTCATTGATCAACGTAGATGGAAATGCAATTTGTGCTATAGAGTAAACGATGTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265175.5
ENST00000399100.6
ENST00000504968.6