RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC23IP (Homo sapiens)

Ensembl gene IDs: ENSG00000107651

Ensembl transcript IDs: ENST00000369075.8, ENST00000442952.1, ENST00000446561.1, ENST00000462222.1, ENST00000470478.1, ENST00000475542.1, ENST00000483890.1

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTaGTCCTTCTCTGCCCATTACTCAGAAGACAGGCTGAATGACACA +
Preference number: 1 (lower is better)
Translates to: QDCCHSAATCFFYEP*SFSAHYSEDRLNDT
Trigger: TGTGTCATTCAGCCTGTCTTCTGAGTAATGGGCAGAGAAGGACCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR GCA 90 bp GTTGTGATGTTCTTTCCAACCTCGCGTCTTTCCACAGGTCTGGAATaGACTGTCCTTTTTCCGTCTTCACCTGGCCACATCTCTTTACCT +
Preference number: 1 (lower is better)
Translates to: VVMFFPTSRLSTGLE*TVLFPSSPGHISLP
Trigger: AGGTAAAGAGATGTGGCCAGGTGAAGACGGAAAAAGGACAGTGCATTCCAGACCTGTGGAAAGACGCGAGGTTGGAAAGAACATCACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR TCA 90 bp TCACTCTTCTGTCATCCATCACAGGAGCGAAGTGGGAAAGTCCTCTaGGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGC +
Preference number: 1 (lower is better)
Translates to: SLFCHPSQERSGKVL*GFSQQWKLYWDFLC
Trigger: GCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCCCACTTCGCTCCTGTGATGGATGACAGAAGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR CCA 90 bp AACTTCAGCAACAAGGCAAGTGCACAGCTACCTTGGATGACAAAATaGAAAACCTCTCATCTGCTTGCTTCTCCTCCTGGAAATGGACGT +
Preference number: 1 (lower is better)
Translates to: NFSNKASAQLPWMTK*KTSHLLASPPGNGR
Trigger: ACGTCCATTTCCAGGAGGAGAAGCAAGCAGATGAGAGGTTTTCCATTTTGTCATCCAAGGTAGCTGTGCACTTGCCTTGTTGCTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR GCA 90 bp CTATTTTCTGTGTACTCAAGTATTAAAATGAAAGGGCAAGACTGCTaGCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGTCCTTC +
Preference number: 1 (lower is better)
Translates to: LFSVYSSIKMKGQDC*HSAATCFFYEPWSF
Trigger: GAAGGACCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTTCATTTTAATACTTGAGTACACAGAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR TCA 90 bp ACTGAATTCTATCCACTCTCCTCTGAGGACCCAGCCCTGGGAAACTaGCTCAAACTAAGCTGGAATGCCAACTTATTAAGTTACAATGAG +
Preference number: 1 (lower is better)
Translates to: TEFYPLSSEDPALGN*LKLSWNANLLSYNE
Trigger: CTCATTGTAACTTAATAAGTTGGCATTCCAGCTTAGTTTGAGTCAGTTTCCCAGGGCTGGGTCCTCAGAGGAGAGTGGATAGAATTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR GCA 90 bp AATCTGTGCAGTTTCCTTGTCTTATACTGTGGTTTTGAGAAAACATaGTTGTCTGGTTGGATTCAAGAAGCACGCGTGTCCAGCAGACTT +
Preference number: 1 (lower is better)
Translates to: NLCSFLVLYCGFEKT*LSGWIQEARVSSRL
Trigger: AAGTCTGCTGGACACGCGTGCTTCTTGAATCCAACCAGACAAGCATGTTTTCTCAAAACCACAGTATAAGACAAGGAAACTGCACAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR CCA 90 bp TTCCTTGTCTTATACTGTGGTTTTGAGAAAACATGCTTGTCTGGTTaGATTCAAGAAGCACGCGTGTCCAGCAGACTTAGAAAGCAGGTT +
Preference number: 1 (lower is better)
Translates to: FLVLYCGFEKTCLSG*IQEARVSSRLRKQV
Trigger: AACCTGCTTTCTAAGTCTGCTGGACACGCGTGCTTCTTGAATCCAACCAGACAAGCATGTTTTCTCAAAACCACAGTATAAGACAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR TCA 90 bp AAATCACTCGAATCTGTGCAGTTTCCTTGTCTTATACTGTGGTTTTaGGAAAACATGCTTGTCTGGTTGGATTCAAGAAGCACGCGTGTC +
Preference number: 1 (lower is better)
Translates to: KSLESVQFPCLILWF*ENMLVWLDSRSTRV
Trigger: GACACGCGTGCTTCTTGAATCCAACCAGACAAGCATGTTTTCTCAAAACCACAGTATAAGACAAGGAAACTGCACAGATTCGAGTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR GCA 90 bp GAGACCAAATGCTGTGAGTTACTATTTCAAATACATGATCATCCCTaGCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTTCTAT +
Preference number: 1 (lower is better)
Translates to: ETKCCELLFQIHDHP*QDSGISSFSCTGFY
Trigger: ATAGAACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTATTTGAAATAGTAACTCACAGCATTTGGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR GCA 90 bp TGTCTTCATCAGTACTGTGATGACTCTTTCACCTTTGACTTCAGATaGTGGCGCTTTTTACTTTTTGTGCCAAACTCTACACATGAAACA +
Preference number: 1 (lower is better)
Translates to: CLHQYCDDSFTFDFR*WRFLLFVPNSTHET
Trigger: TGTTTCATGTGTAGAGTTTGGCACAAAAAGTAAAAAGCGCCAGCATCTGAAGTCAAAGGTGAAAGAGTCATCACAGTACTGATGAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR TCA 90 bp AAAGAGCTGGAATTATTTCCCAAACTCCCACTGGTGTTAACAACATaGCATTATTTTCAGTGTTCTCTGGGACCAATACATTCGGGAAAT +
Preference number: 1 (lower is better)
Translates to: KELELFPKLPLVLTT*HYFQCSLGPIHSGN
Trigger: ATTTCCCGAATGTATTGGTCCCAGAGAACACTGAAAATAATGTCATGTTGTTAACACCAGTGGGAGTTTGGGAAATAATTCCAGCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR GCA 90 bp TTCACTCAGCAGCTGGATTCTCACCTAGTTTATAGACTGAAATCCTaGAAGGTGGTTACAACAGTGAACAATATGTTCATACATAAAGAC +
Preference number: 1 (lower is better)
Translates to: FTQQLDSHLVYRLKS*KVVTTVNNMFIHKD
Trigger: GTCTTTATGTATGAACATATTGTTCACTGTTGTAACCACCTTGCAGGATTTCAGTCTATAAACTAGGTGAGAATCCAGCTGCTGAGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR GCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGAAAGGGCAAGACTGCTaGCACTCAGCTGCCACATGC +
Preference number: 2 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGKGQDC*HSAATC
Trigger: GCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR GCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGGAGATCCCAACTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGEIPTH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGTTGGGATCTC...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR TCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACGAGGTTGTCAGGGGATaGGCTGCTCCTGAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNEVVRG*AAPEEE
Trigger: CTCTTCCTCAGGAGCAGCTCATCCCCTGACAACCTC...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR GCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGGGAAAACCTCTCATCTaGTTGCTTCTCCTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWGKPLI*LLLLLE
Trigger: TTCCAGGAGGAGAAGCAAGCAGATGAGAGGTTTTCC...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACAACCAGATTAGGGGCTaGGAGGGGAGGTTGTCAGGG +
Preference number: 2 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNNQIRG*EGRLSG
Trigger: CCCTGACAACCTCCCCTCCCAGCCCCTAATCTGGTT...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGCAGGCTAGAGTGCAGTaGCGAGATCCCAACTCACTG +
Preference number: 2 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMQARVQ*RDPNSL
Trigger: CAGTGAGTTGGGATCTCGCCACTGCACTCTAGCCTG...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR TCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACACCAGGTCCCTCCCCTaGCACGTGGGGATTACAATT +
Preference number: 2 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNTRSLP*HVGITI
Trigger: AATTGTAATCCCCACGTGTCAGGGGAGGGACCTGGT...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR GCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGACCCTGGTCCTTCTCTaGCCATTACTCAGAAGACAG +
Preference number: 2 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMTLVLL*PLLRRQ
Trigger: CTGTCTTCTGAGTAATGGGCAGAGAAGGACCAGGGT...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACCACTCAGCTGCCACATaGTTCTTCTACGAACCCTGG +
Preference number: 2 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNHSAAT*FFYEPW
Trigger: CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTG...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACGGTGGCAGGAGAGAGTaGAGGGAAAACTGCCACTTT +
Preference number: 2 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNGGRRE*RENCHF
Trigger: AAAGTGGCAGTTTTCCCTGCACTCTCTCCTGCCACC...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR GCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGATACATGATCATCCCTaGCAAGATAGCGGCATCTCC +
Preference number: 2 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMIHDHP*QDSGIS
Trigger: GGAGATGCCGCTATCTTGGCAGGGATGATCATGTAT...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGTTCTTCTACGAACCCTaGTCCTTCTCTGCCCATTAC +
Preference number: 2 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMFFYEP*SFSAHY
Trigger: GTAATGGGCAGAGAAGGACCAGGGTTCGTAGAAGAA...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR TCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACAGTGGGAAAGTCCTCTaGGGATTTTCTCAGCAATGG +
Preference number: 2 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNSGKVL*GFSQQW
Trigger: CCATTGCTGAGAAAATCCTCAGAGGACTTTCCCACT...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR TCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGGAGAGAAATGAAGGCTaGAAGGGAATCAAGAAAACC +
Preference number: 2 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGERNEG*KGIKKT
Trigger: GGTTTTCTTGATTCCCTTTCAGCCTTCATTTCTCTC...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGTGGTTTTCACATTATTaGAACTTCAGCAACAAGGCA +
Preference number: 2 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWWFSHY*NFSNKA
Trigger: TGCCTTGTTGCTGAAGTTCCAATAATGTGAAAACCA...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR TCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTCTGTGTCCTGTCTTTTaGATCCCTATATCCGAGAAT +
Preference number: 2 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGLCPVF*IPISEN
Trigger: ATTCTCGGATATAGGGATTCAAAAGACAGGACACAG...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR TCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGCTCTCAGCAATCGTTTaGGGGATTTATAAAACCTCA +
Preference number: 2 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMLSAIV*GIYKTS
Trigger: TGAGGTTTTATAAATCCCTCAAACGATTGCTGAGAG...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTCAATGGAAGTTGTACTaGGACTTTCTGTGCAGACAA +
Preference number: 2 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGQWKLY*DFLCRQ
Trigger: TTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTG...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGCCTTGGATGACAAAATaGAAAACCTCTCATCTGCTT +
Preference number: 2 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMPWMTK*KTSHLL
Trigger: AAGCAGATGAGAGGTTTTCCATTTTGTCATCCAAGG...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGAATGAAAGACAAACATaGTGGGTTATCCCAACCACA +
Preference number: 2 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMNERQT*WVIPTT
Trigger: TGTGGTTGGGATAACCCACCATGTTTGTCTTTCATT...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR CAA 90 bp CTGTGCAGTTTCCTTGTCTTATACTGTGGTTTTGAGAAAACATGCTaGTCTGGTTGGATTCAAGAAGCACGCGTGTCCAGCAGACTTAGA +
Preference number: 2 (lower is better)
Translates to: LCSFLVLYCGFEKTC*SGWIQEARVSSRLR
Trigger: TCTAAGTCTGCTGGACACGCGTGCTTCTTGAATCCAACCAGACAAGCATGTTTTCTCAAAACCACAGTATAAGACAAGGAAACTGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACTACTGGGACTTTCTGTaGAGACAAGAAAGTACAGTA +
Preference number: 2 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNYWDFL*RQESTV
Trigger: TACTGTACTTTCTTGTCTGCACAGAAAGTCCCAGTA...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACTATAGACTGAAATCCTaGAAGGTGGTTACAACAGTG +
Preference number: 2 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNYRLKS*KVVTTV
Trigger: CACTGTTGTAACCACCTTGCAGGATTTCAGTCTATA...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTGGATTTTCTCAGCAATaGAAGTTGTACTGGGACTTT +
Preference number: 2 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGGFSQQ*KLYWDF
Trigger: AAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCC...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR CAA 90 bp GTCCTGTCTTTTGAATCCCTATATCCGAGAATTGTGGCTGAGCAATaGTTAATGAATCACTCTTCTGTCATCCATCACAGGAGCGAAGTG +
Preference number: 2 (lower is better)
Translates to: VLSFESLYPRIVAEQ*LMNHSSVIHHRSEV
Trigger: CACTTCGCTCCTGTGATGGATGACAGAAGAGTGATTCATTAACAATTGCTCAGCCACAATTCTCGGATATAGGGATTCAAAAGACAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR TCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACCAAAAGGGGTTCAAGTaGCTCACAGTTCTGCATGGT +
Preference number: 2 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNQKGFK*LTVLHG
Trigger: ACCATGCAGAACTGTGAGTCACTTGAACCCCTTTTG...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR TCA 90 bp CCATATGCTTGGCATCTTCTATCAACAACAAATCCCAGCGGCCTAGGTTCTATTACGATTAGCACCTCATaGGTGATGACACCACTTAAA +
Preference number: 2 (lower is better)
Translates to: PYAWHLLSTTNPSGLGSITISTS*VMTPLK
Trigger: TTTAAGTGGTGTCATCACTCATGAGGTGCTAATCGT...AATAGAACCTAGGCCGCTGGGATTTGTTGTTGATAGAAGATGCCAAGCATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442952.1
3UTR-3UTR GCA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTATTCCATCCCAGATCTaGCACTACCCAGTCTGGGAA +
Preference number: 2 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNAIPSQI*HYPVWE
Trigger: TTCCCAGACTGGGTAGTGGCAGATCTGGGATGGAAT...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACGGTTTTGAGAAAACATaGTTGTCTGGTTGGATTCAA +
Preference number: 2 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNGFEKT*LSGWIQ
Trigger: TTGAATCCAACCAGACAAGCATGTTTTCTCAAAACC...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR GCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGTACATTCGGGAAATCTaGAAGAGTTGCTGTTTTATT +
Preference number: 2 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMYIREI*KSCCFI
Trigger: AATAAAACAGCAACTCTTGCAGATTTCCCGAATGTA...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACTTCTTGAAAATAAGGTaGATCTCACTTCTTTCCACA +
Preference number: 2 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNFLKIR*ISLLST
Trigger: TGTGGAAAGAAGTGAGATGCACCTTATTTTCAAGAA...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACGAAAGACAAACATGGTaGGTTATCCCAACCACACCA +
Preference number: 2 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNERQTW*VIPTTP
Trigger: TGGTGTGGTTGGGATAACCCACCATGTTTGTCTTTC...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR TCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACGCTAACGTTACATACTaGCCATATAAGCAGGTACTC +
Preference number: 2 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNANVTY*PYKQVL
Trigger: GAGTACCTGCTTATATGGTCAGTATGTAACGTTAGC...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR GCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACACCTTTGACTTCAGATaGTGGCGCTTTTTACTTTTT +
Preference number: 2 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNTFDFR*WRFLLF
Trigger: AAAAAGTAAAAAGCGCCAGCATCTGAAGTCAAAGGT...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR TCA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTGATTCAGTTGGGATATaGGTGATCTTGATTATTTCC +
Preference number: 2 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNADSVGI*VILIIS
Trigger: GGAAATAATCAAGATCACTCATATCCCAACTGAATC...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CCA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTTTTGACTTCAGATGCTaGCGCTTTTTACTTTTTGTG +
Preference number: 2 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNAFDFRC*RFLLFV
Trigger: CACAAAAAGTAAAAAGCGCCAGCATCTGAAGTCAAA...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR CCA 72 bp TGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTaGTCCTTCTCTGCCCATTACTCAGAAGACAGGCTG +
Preference number: 3 (lower is better)
Translates to: CHSAATCFFYEP*SFSAHYSEDRL
Trigger: CAGCCTGTCTTCTGAGTAATGGGCAGAGAAGGACCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR GCA 72 bp CAACCACACCAGTCCCACCTGTCCATGAACCTGAACTaGAGCACATCCACTAACGAATATGTAGCATTGCCC +
Preference number: 3 (lower is better)
Translates to: QPHQSHLSMNLN*STSTNEYVALP
Trigger: GGGCAATGCTACATATTCGTTAGTGGATGTGCTGCAGTTCAGGTTCATGGACAGGTGGGACTGGTGTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR CCA 72 bp TCTTGTGAGAACTCCCTCACTATCACAAGAACAGCATaGGGAAACAGCCCCCATGATCCAATCACCTCCCAC +
Preference number: 3 (lower is better)
Translates to: SCENSLTITRTA*GNSPHDPITSH
Trigger: GTGGGAGGTGATTGGATCATGGGGGCTGTTTCCCCATGCTGTTCTTGTGATAGTGAGGGAGTTCTCACAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CAA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGTTGGTTTTCACATTATaGGAACTTCAGCAACAAGGC +
Preference number: 3 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWLVFTL*ELQQQG
Trigger: GCCTTGTTGCTGAAGTTCCAATAATGTGAAAACCAA...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CAA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGATGACTCTTTCACCTTaGACTTCAGATGCTGGCGCT +
Preference number: 3 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMMTLSP*TSDAGA
Trigger: AGCGCCAGCATCTGAAGTCAAAGGTGAAAGAGTCAT...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CAA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGGAAAGCAGGTTCCTCTaGTCATACAGCACGTTAACA +
Preference number: 3 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGESRFL*SYSTLT
Trigger: TGTTAACGTGCTGTATGACAAGAGGAACCTGCTTTC...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR TCA 72 bp TGTCATCCATCACAGGAGCGAAGTGGGAAAGTCCTCTaGGGATTTTCTCAGCAATGGAAGTTGTACTGGGAC +
Preference number: 3 (lower is better)
Translates to: CHPSQERSGKVL*GFSQQWKLYWD
Trigger: GTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCCCACTTCGCTCCTGTGATGGATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CAA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTGCTTCCCAGGACTTCTaGAAAATAAGGTGCATCTCA +
Preference number: 3 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGASQDF*KIRCIS
Trigger: TGAGATGCACCTTATTTTCAAGAAGTCCTGGGAAGC...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CAA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGTGGCTGAAATCTATGTaGTCTGGAGTCAATTACAGC +
Preference number: 3 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMWLKSM*SGVNYS
Trigger: GCTGTAATTGACTCCAGACAACATAGATTTCAGCCA...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR TCA 72 bp TATCCACTCTCCTCTGAGGACCCAGCCCTGGGAAACTaGCTCAAACTAAGCTGGAATGCCAACTTATTAAGT +
Preference number: 3 (lower is better)
Translates to: YPLSSEDPALGN*LKLSWNANLLS
Trigger: ACTTAATAAGTTGGCATTCCAGCTTAGTTTGAGTCAGTTTCCCAGGGCTGGGTCCTCAGAGGAGAGTGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR CCA 72 bp AACAAGGCAAGTGCACAGCTACCTTGGATGACAAAATaGAAAACCTCTCATCTGCTTGCTTCTCCTCCTGGA +
Preference number: 3 (lower is better)
Translates to: NKASAQLPWMTK*KTSHLLASPPG
Trigger: TCCAGGAGGAGAAGCAAGCAGATGAGAGGTTTTCCATTTTGTCATCCAAGGTAGCTGTGCACTTGCCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CAA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTGGCGCTTTTTACTTTTaGTGCCAAACTCTACACATG +
Preference number: 3 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGGAFYF*CQTLHM
Trigger: CATGTGTAGAGTTTGGCACAAAAAGTAAAAAGCGCC...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR CCA 72 bp TGGAACTTCAGCAACAAGGCAAGTGCACAGCTACCTTaGATGACAAAATGGAAAACCTCTCATCTGCTTGCT +
Preference number: 3 (lower is better)
Translates to: WNFSNKASAQLP*MTKWKTSHLLA
Trigger: AGCAAGCAGATGAGAGGTTTTCCATTTTGTCATCCAAGGTAGCTGTGCACTTGCCTTGTTGCTGAAGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CAA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGATTGTGGCTGAGCAATaGTTAATGAATCACTCTTCT +
Preference number: 3 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMIVAEQ*LMNHSS
Trigger: AGAAGAGTGATTCATTAACAATTGCTCAGCCACAAT...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR GCA 72 bp AGTTTCCTTGTCTTATACTGTGGTTTTGAGAAAACATaGTTGTCTGGTTGGATTCAAGAAGCACGCGTGTCC +
Preference number: 3 (lower is better)
Translates to: SFLVLYCGFEKT*LSGWIQEARVS
Trigger: GGACACGCGTGCTTCTTGAATCCAACCAGACAAGCATGTTTTCTCAAAACCACAGTATAAGACAAGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR CCA 72 bp TTATACTGTGGTTTTGAGAAAACATGCTTGTCTGGTTaGATTCAAGAAGCACGCGTGTCCAGCAGACTTAGA +
Preference number: 3 (lower is better)
Translates to: LYCGFEKTCLSG*IQEARVSSRLR
Trigger: TCTAAGTCTGCTGGACACGCGTGCTTCTTGAATCCAACCAGACAAGCATGTTTTCTCAAAACCACAGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CAA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTTCTCAGCAATGGAAGTaGTACTGGGACTTTCTGTGC +
Preference number: 3 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNASQQWK*YWDFLC
Trigger: GCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGA...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CAA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTAAACCTCTCATCTGCTaGCTTCTCCTCCTGGAAATG +
Preference number: 3 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNAKPLIC*LLLLEM
Trigger: CATTTCCAGGAGGAGAAGCAAGCAGATGAGAGGTTT...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR-3UTR CAA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACCCACCAGAAAGCTGCTaGGTAAACACTAAAGTACAG +
Preference number: 3 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNPPESC*VNTKVQ
Trigger: CTGTACTTTAGTGTTTACCAAGCAGCTTTCTGGTGG...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR GCA 72 bp CAGTACTGTGATGACTCTTTCACCTTTGACTTCAGATaGTGGCGCTTTTTACTTTTTGTGCCAAACTCTACA +
Preference number: 3 (lower is better)
Translates to: QYCDDSFTFDFR*WRFLLFVPNST
Trigger: TGTAGAGTTTGGCACAAAAAGTAAAAAGCGCCAGCATCTGAAGTCAAAGGTGAAAGAGTCATCACAGTACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR TCA 72 bp GAATCTGTGCAGTTTCCTTGTCTTATACTGTGGTTTTaGGAAAACATGCTTGTCTGGTTGGATTCAAGAAGC +
Preference number: 3 (lower is better)
Translates to: ESVQFPCLILWF*ENMLVWLDSRS
Trigger: GCTTCTTGAATCCAACCAGACAAGCATGTTTTCTCAAAACCACAGTATAAGACAAGGAAACTGCACAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR TCA 72 bp ATTCTACCATTAGGAGCCAATGCTAACGTTACATACTaGCCATATAAGCAGGTACTCAAAATGAAAAGGGAA +
Preference number: 3 (lower is better)
Translates to: ILPLGANANVTY*PYKQVLKMKRE
Trigger: TTCCCTTTTCATTTTGAGTACCTGCTTATATGGTCAGTATGTAACGTTAGCATTGGCTCCTAATGGTAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR TCA 72 bp GAATTATTTCCCAAACTCCCACTGGTGTTAACAACATaGCATTATTTTCAGTGTTCTCTGGGACCAATACAT +
Preference number: 3 (lower is better)
Translates to: ELFPKLPLVLTT*HYFQCSLGPIH
Trigger: ATGTATTGGTCCCAGAGAACACTGAAAATAATGTCATGTTGTTAACACCAGTGGGAGTTTGGGAAATAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGTCTCTCGGCCATGGCTaGGGCCCACCGTCCGATACA +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWSLGHG*GPPSDT
Trigger: TGTATCGGACGGTGGGCCGCAGCCATGGCCGAGAGA...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGGGTCTGGCAGGTACCTaGTGCTGTGCCGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWGLAGT*CCAGDC
Trigger: GCAGTCACCGGCACAGCAGCAGGTACCTGCCAGACC...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGTGCCCGATGAGGAAGTaGAGGCGCCGCCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMCPMRK*RRRRCH
Trigger: GTGGCAGCGGCGGCGCCTCCACTTCCTCATCGGGCA...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGGGTGTTTGGCACTGCTaGAGCTGGGGTGGTGCAATG +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWGVWHC*SWGGAM
Trigger: CATTGCACCACCCCAGCTGCAGCAGTGCCAAACACC...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGGTTTTCTCTCGGCCATaGCTGCGGCCCACCGTCCGA +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGVFSRP*LRPTVR
Trigger: TCGGACGGTGGGCCGCAGCCATGGCCGAGAGAAAAC...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGAGAAGCGGAGGCCTaGGTGACTGGGATGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMGEAEA*VTGMKG
Trigger: GCCCTTCATCCCAGTCACCCAGGCCTCCGCTTCTCC...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGCTATCCACTCTCCTCTaGGGACCCAGCCCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGLSTLL*GPSPGK
Trigger: TTTCCCAGGGCTGGGTCCTCAGAGGAGAGTGGATAG...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGCTGGCAGGTACCTGCTaGTGTGCCGGTGACTGCACT +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMLAGTC*CAGDCT
Trigger: AGTGCAGTCACCGGCACAGCAGCAGGTACCTGCCAG...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACAGCGCCCTCCATCCGTaGCAAGAACCACGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNSALHP*QEPRSP
Trigger: CGGAGAGCGTGGTTCTTGGCACGGATGGAGGGCGCT...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGAACCAGATTAGGGGCTaGGAGGGGAGGTTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGNQIRG*EGRLSG
Trigger: CCCTGACAACCTCCCCTCCCAGCCCCTAATCTGGTT...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGCCAGCCCTGGGAAACTaGCTCAAACTAAGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWPALGN*LKLSWN
Trigger: ATTCCAGCTTAGTTTGAGTCAGTTTCCCAGGGCTGG...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGCAGCAACAAGGCAAGTaGACAGCTACCTTGGATGAC +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWQQQGK*TATLDD
Trigger: GTCATCCAAGGTAGCTGTGCACTTGCCTTGTTGCTG...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGATTCCATCCCAGATCTaGCACTACCCAGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWIPSQI*HYPVWE
Trigger: TTCCCAGACTGGGTAGTGGCAGATCTGGGATGGAAT...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGACCCTGGTCCTTCTCTaGCCATTACTCAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWTLVLL*PLLRRQ
Trigger: CTGTCTTCTGAGTAATGGGCAGAGAAGGACCAGGGT...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACGCGTCTCACTTCGGCTaGCTCCTCTTCCCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNASHFG*LLFPVG
Trigger: GCCTACTGGGAAGAGGAGCCAGCCGAAGTGAGACGC...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGCCATTCATCTGGCACTaGGGAGGGCTGGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMPFIWH*GGLELN
Trigger: GTTCAGTTCCAGCCCTCCTCAGTGCCAGATGAATGG...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGTGGGTTGAAGACGTATaGGCACGGGCAAACTCATTT +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWWVEDV*ARANSF
Trigger: AAATGAGTTTGCCCGTGCTCATACGTCTTCAACCCA...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGTTCTTGCAACTGGGTTaGAGACGTATGAGCACGGGC +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGFLQLG*RRMSTG
Trigger: GCCCGTGCTCATACGTCTTCAACCCAGTTGCAAGAA...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGTGCTGTGCCGGTGACTaGACTGAAGAAGGAACCGGT +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMCCAGD*TEEGTG
Trigger: ACCGGTTCCTTCTTCAGTGCAGTCACCGGCACAGCA...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CCATATGCTTGGCATCTTCTATCAACAACAAATCCCAGCGGCCTAGGTTCTATTGGTCTGGCAGGTACCTaGTGCTGTGCCGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: PYAWHLLSTTNPSGLGSIGLAGT*CCAGDC
Trigger: GCAGTCACCGGCACAGCAGCAGGTACCTGCCAGACC...AATAGAACCTAGGCCGCTGGGATTTGTTGTTGATAGAAGATGCCAAGCATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR GCA 90 bp CTTCTATCAACAACAAATCCCAGCGGCCTAGGTTCTATTGAAGGCTTGACACAAAGCGCCCTCCATCCGTaGCAAGAACCACGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: LLSTTNPSGLGSIEGLTQSALHP*QEPRSP
Trigger: CGGAGAGCGTGGTTCTTGGCACGGATGGAGGGCGCT...TTGTGTCAAGCCTTCAATAGAACCTAGGCCGCTGGGATTTGTTGTTGATAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR GCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGCACTCAGCTGCCACATaGTTCTTCTACGAACCCTGG +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGHSAAT*FFYEPW
Trigger: CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTG...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGACAGTTCTGCATGGTTaGGGAGACCTCAGGAAACTT +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWTVLHG*GDLRKL
Trigger: AAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGT...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGAGGATCACTGCTGCTTaGTACCTGAGAGAAGTAACT +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWRITAA*YLREVT
Trigger: AGTTACTTCTCTCAGGTATCAAGCAGCAGTGATCCT...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTACCAGGTCCCTCCCCTaGCACGTGGGGATTACAATT +
Preference number: 4 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGTRSLP*HVGITI
Trigger: AATTGTAATCCCCACGTGTCAGGGGAGGGACCTGGT...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTCAGTCGCCCCAGTTGTaGTGTTCTTTCCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGQSPQL*CSFQPR
Trigger: GCGAGGTTGGAAAGAACATCACAACTGGGGCGACTG...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACAAAGGGCAAGACTGCTaGCACTCAGCTGCCACATGC +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNKGQDC*HSAATC
Trigger: GCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGTGGCAGGAGAGAGTaGAGGGAAAACTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMGGRRE*RENCHF
Trigger: AAAGTGGCAGTTTTCCCTGCACTCTCTCCTGCCACC...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGCAGACAAGAAAGGGAGGGCCTGGTGTTTaGCACTGCTGCAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RIFSAMEVVLGLSVQTRKGGPGV*HCCSWG
Trigger: ACCCCAGCTGCAGCAGTGCCAAACACCAGGCCCTCC...CTTTCTTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGCGGTGGCAAAGATCCTaGAGGCATCTGGTACATCTG +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMRWQRS*RHLVHL
Trigger: CAGATGTACCAGATGCCTCCAGGATCTTTGCCACCG...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGGAAAGACAAACATGGTaGGTTATCCCAACCACACCA +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWERQTW*VIPTTP
Trigger: TGGTGTGGTTGGGATAACCCACCATGTTTGTCTTTC...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGCCCTCCCCTGACACGTaGGGATTACAATTCAAGATG +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGPSPDT*GLQFKM
Trigger: CATCTTGAATTGTAATCCCCACGTGTCAGGGGAGGG...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGAATCTTCGGTGCCACTaGTTAGTGGTTACAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWNLRCH*LVVTAF
Trigger: AAAAGCTGTAACCACTAATCAGTGGCACCGAAGATT...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGCTTTGTGATGTGGAATaGGAACAGCTTTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWLCDVE*EQLLGP
Trigger: TGGACCTAAAAGCTGTTCTCATTCCACATCACAAAG...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGCTTTTTCTGCCTTTGTaGTGTGGAATGAGAACAGCT +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWLFLPL*CGMRTA
Trigger: AGCTGTTCTCATTCCACATCACAAAGGCAGAAAAAG...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGAGGTTGTCAGGGGATaGGCTGCTCCTGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCEVVRG*AAPEEE
Trigger: CTCTTCCTCAGGAGCAGCTCATCCCCTGACAACCTC...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp TTCTCTGTGAACAGCATCAAAACAAGCTGTCTTGTAAGTAAAGTCCGCTCCACTCTGGCAGGTACCTGCTaGTGTGCCGGTGACTGCACT +
Preference number: 4 (lower is better)
Translates to: FSVNSIKTSCLVSKVRSTLAGTC*CAGDCT
Trigger: AGTGCAGTCACCGGCACAGCAGCAGGTACCTGCCAG...AGTGGAGCGGACTTTACTTACAAGACAGCTTGTTTTGATGCTGTTCACAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR CCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGGGAATTCCTTGGGGTTaGTTCCCAAAATATGAAGGA +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWGIPWG*FPKYEG
Trigger: TCCTTCATATTTTGGGAACCAACCCCAAGGAATTCC...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp GTGAACAGCATCAAAACAAGCTGTCTTGTAAGTAAAGTCCGCTCCACTGTGAATGCGTCTCACTTCGGCTaGCTCCTCTTCCCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: VNSIKTSCLVSKVRSTVNASHFG*LLFPVG
Trigger: GCCTACTGGGAAGAGGAGCCAGCCGAAGTGAGACGC...ATTCACAGTGGAGCGGACTTTACTTACAAGACAGCTTGTTTTGATGCTGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR CCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGGAGAAACATAGCAATTaGAGACCCCAAGGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWEKHSN*RPQGKE
Trigger: TTCTTTGCCTTGGGGTCTCCAATTGCTATGTTTCTC...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGGCATCTGGTACATCTaGACAGGGGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCGIWYI*TGGPEG
Trigger: ACCTTCTGGACCCCCTGTTCAGATGTACCAGATGCC...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp TCCATATGCTTGGCATCTTCTATCAACAACAAATCCCAGCGGCCTAGGTTCTATAAAGGAGATGGCACTTaGACAGAGGGAGCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SICLASSINNKSQRPRFYKGDGT*TEGAPG
Trigger: ACCTGGGGCTCCCTCTGTTCAAGTGCCATCTCCTTT...ATAGAACCTAGGCCGCTGGGATTTGTTGTTGATAGAAGATGCCAAGCATATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR TCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGCGGATCTGGCTGAACTaGATTATAGATTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWRIWLN*IIDFFK
Trigger: CTTGAAGAAATCTATAATTCAGTTCAGCCAGATCCG...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTACCAAATGGTCAACTTaGGGCATCTCCCCGTCGGGA +
Preference number: 4 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCTKWST*GISPSG
Trigger: TCCCGACGGGGAGATGCCTCAAGTTGACCATTTGGT...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGCTCTCAGCAATCGTTTaGGGGATTTATAAAACCTCA +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWLSAIV*GIYKTS
Trigger: TGAGGTTTTATAAATCCCTCAAACGATTGCTGAGAG...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGTCCATCTTGCGTGGTaGCCCATTCATCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCVHLAW*PIHLAL
Trigger: CAGTGCCAGATGAATGGGGCACCACGCAAGATGGAC...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGACAGGTCCAATGCCATaGACCACAAACACCAAATGG +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMTGPMP*TTNTKW
Trigger: CCATTTGGTGTTTGTGGTGCATGGCATTGGACCTGT...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGCTGAAGTTTGATCAATaGTGGGGCTGTTCTGGACTA +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGLKFDQ*WGCSGL
Trigger: TAGTCCAGAACAGCCCCAGCATTGATCAAACTTCAG...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGTACTGGGACTTTCTGTaGAGACAAGAAAGTACAGTA +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWYWDFL*RQESTV
Trigger: TACTGTACTTTCTTGTCTGCACAGAAAGTCCCAGTA...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTGGATTGTATCCTGGTTaGGGAATTCCTTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGGLYPG*GIPWGW
Trigger: CCAACCCCAAGGAATTCCCCAACCAGGATACAATCC...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTCTGCTGCCAGGGGTATaGCGATATGGATTGTATCCT +
Preference number: 4 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGLLPGV*RYGLYP
Trigger: AGGATACAATCCATATCGCCATACCCCTGGCAGCAG...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTAGGGGGTCCAGAAGGTaGAGGATGAGCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNARGSRR*RMSRRA
Trigger: GGCCCTCCTGCTCATCCTCCACCTTCTGGACCCCCT...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGACTATGCCAATGAACTaGAAGGAACTCCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGTMPMN*KELHSA
Trigger: AGCAGAGTGGAGTTCCTTCCAGTTCATTGGCATAGT...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACCACGCAAGCACCAACTaGAAGTTTCCTCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNHASTN*KFPLWL
Trigger: GAGCCAAAGAGGAAACTTCCAGTTGGTGCTTGCGTG...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGACATGCTTGTCTGGTTaGATTCAAGAAGCACGCGTG +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMTCLSG*IQEARV
Trigger: CACGCGTGCTTCTTGAATCCAACCAGACAAGCATGT...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGGTCCTCAATAACCCCTaGCCTGTTTTATGTGTCATC +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGVLNNP*PVLCVI
Trigger: GATGACACATAAAACAGGCCAGGGGTTATTGAGGAC...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGTTTTCCGTCTTCACCTaGCCACATCTCTTTACCTGT +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGFSVFT*PHLFTC
Trigger: ACAGGTAAAGAGATGTGGCCAGGTGAAGACGGAAAA...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACGAGGAGGGCTGGAACTaGACAATAACCTTTGGATTG +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNEEGWN*TITFGL
Trigger: CAATCCAAAGGTTATTGTTCAGTTCCAGCCCTCCTC...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGGTTTCATTGGTAAAGTaGCGAAATCGACCAATACTT +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWVSLVK*RNRPIL
Trigger: AAGTATTGGTCGATTTCGTCACTTTACCAATGAAAC...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTAGTGGGAAAGTCCTCTaGGGATTTTCTCAGCAATGG +
Preference number: 4 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGSGKVL*GFSQQW
Trigger: CCATTGCTGAGAAAATCCTCAGAGGACTTTCCCACT...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGCTGTGTCCTGTCTTTTaGATCCCTATATCCGAGAAT +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGLCPVF*IPISEN
Trigger: ATTCTCGGATATAGGGATTCAAAAGACAGGACACAG...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp TCCATATGCTTGGCATCTTCTATCAACAACAAATCCCAGCGGCCTAGGTTCTATCGGCCTAGGTTCTATTaGAGGCTTGACACAAGCACC +
Preference number: 4 (lower is better)
Translates to: SICLASSINNKSQRPRFYRPRFY*RLDTST
Trigger: GGTGCTTGTGTCAAGCCTTCAATAGAACCTAGGCCG...ATAGAACCTAGGCCGCTGGGATTTGTTGTTGATAGAAGATGCCAAGCATATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR GCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGGTCTTCTGGGCACTTTaGTCTTGTCCTTTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGVFWAL*SCPFVE
Trigger: TTCTACAAAAGGACAAGAGCAAAGTGCCCAGAAGAC...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGGAGCTAATAAAACCCTaGTTCAAATCAGATCCCATA +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWELIKP*FKSDPI
Trigger: TATGGGATCTGATTTGAAGCAGGGTTTTATTAGCTC...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACGGAAAACCTCTCATCTaGTTGCTTCTCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNGKPLI*LLLLLE
Trigger: TTCCAGGAGGAGAAGCAAGCAGATGAGAGGTTTTCC...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGGGTTTTGAGAAAACATaGTTGTCTGGTTGGATTCAA +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWGFEKT*LSGWIQ
Trigger: TTGAATCCAACCAGACAAGCATGTTTTCTCAAAACC...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGCAGACAAGAAAGGAGATCCCAACTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RIFSAMEVVLGLSVQTRKEIPTH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGTTGGGATCTC...CTTTCTTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTAGGAGGGAGACTACTTaGCTGAGAAGGCAGATAAGA +
Preference number: 4 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGRRETT*LRRQIR
Trigger: TCTTATCTGCCTTCTCAGCCAAGTAGTCTCCCTCCT...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACTCCTGTCCACACCTGTaGCGTCCCCACCCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNSCPHL*RPHPKN
Trigger: GTTCTTTGGGTGGGGACGCCACAGGTGTGGACAGGA...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGACCTCCTTTGAAGTCTaGGTTCCGACTCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMTSFEV*VPTHKE
Trigger: CTCTTTATGAGTCGGAACCCAGACTTCAAAGGAGGT...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGCAGACAAGAAAGTCAGCCTCCTGTAGCTaGGACTACAGGCACATGCCA +
Preference number: 4 (lower is better)
Translates to: RIFSAMEVVLGLSVQTRKSASCS*DYRHMP
Trigger: TGGCATGTGCCTGTAGTCCCAGCTACAGGAGGCTGA...CTTTCTTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTTTGGTTCCCAAAATATaGAGGAGGGAGACTACTTGG +
Preference number: 4 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGLVPKI*RRETTW
Trigger: CCAAGTAGTCTCCCTCCTTCATATTTTGGGAACCAA...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACAAAGGAGATGGCACTTaGACAGAGGGAGCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNKGDGT*TEGAPG
Trigger: ACCTGGGGCTCCCTCTGTTCAAGTGCCATCTCCTTT...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGAAAGAACTATGCCAATaGACTGGAAGGAACTCCACT +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMKELCQ*TGRNST
Trigger: AGTGGAGTTCCTTCCAGTTCATTGGCATAGTTCTTT...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTAAAGAACCTAAACTGTaGCCAGCAACAGAGACACCT +
Preference number: 4 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGKEPKL*PATETP
Trigger: AGGTGTCTCTGTTGCTGGTCACAGTTTAGGTTCTTT...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGAGAGAAATGAAGGCTaGAAGGGAATCAAGAAAACC +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMERNEG*KGIKKT
Trigger: GGTTTTCTTGATTCCCTTTCAGCCTTCATTTCTCTC...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGAAAACACTCAGTGTCTaGAGTTCAAGTTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMKTLSV*SSSFHQ
Trigger: CTGGTGGAAACTTGAACTGCAGACACTGAGTGTTTT...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTCCTCACCAACATCTGTaGAATCCTCTCCCGGTAAGA +
Preference number: 4 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCPHQHL*NPLPVR
Trigger: TCTTACCGGGAGAGGATTCCACAGATGTTGGTGAGG...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGCAGACAAGAAAGGAGCAGTCAGGGGCTTaGGGAATCCTGATTGTCCAA +
Preference number: 4 (lower is better)
Translates to: RIFSAMEVVLGLSVQTRKEQSGA*GILIVQ
Trigger: TTGGACAATCAGGATTCCCCAAGCCCCTGACTGCTC...CTTTCTTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTGCATTCGAGACATCTTaGGATCCAGTTGTAAAAGGG +
Preference number: 4 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGAFETS*DPVVKG
Trigger: CCCTTTTACAACTGGATCCCAAGATGTCTCGAATGC...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGTTGAGCCTTCGAAATaGATGGTGAAAATGCATTCG +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMVEPSK*MVKMHS
Trigger: CGAATGCATTTTCACCATCCATTTCGAAGGCTCAAC...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGCAGACAAGAAAGTCTGTCCATCTTGCGTaGTGCCCCATTCATCTGGCA +
Preference number: 4 (lower is better)
Translates to: RIFSAMEVVLGLSVQTRKSVHLA*CPIHLA
Trigger: TGCCAGATGAATGGGGCACCACGCAAGATGGACAGA...CTTTCTTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGATCCTTGGAAAAATCTaGACTTTCAACAACCTTTTC +
Preference number: 4 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWILGKI*TFNNLF
Trigger: GAAAAGGTTGTTGAAAGTCCAGATTTTTCCAAGGAT...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACATGCTGGGGCTGTTCTaGACTAATGTTCATTGTTCG +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNMLGLF*TNVHCS
Trigger: CGAACAATGAACATTAGTCCAGAACAGCCCCAGCAT...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACCAGGCTAGAGTGCAGTaGCGAGATCCCAACTCACTG +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNQARVQ*RDPNSL
Trigger: CAGTGAGTTGGGATCTCGCCACTGCACTCTAGCCTG...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGAATGAAAGACAAACATaGTGGGTTATCCCAACCACA +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGNERQT*WVIPTT
Trigger: TGTGGTTGGGATAACCCACCATGTTTGTCTTTCATT...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTACTCACAGTTCTGCATaGTTGGGGAGACCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCTHSSA*LGRPQE
Trigger: TTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAGT...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTCTTCGAAATGGATGGTaGAAATGCATTCGAGACATC +
Preference number: 4 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGLRNGW*KCIRDI
Trigger: GATGTCTCGAATGCATTTTCACCATCCATTTCGAAG...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTGGTGGAGCACCAGGTTaGGCCTTCGAAATGGATGGT +
Preference number: 4 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNAGGAPG*AFEMDG
Trigger: ACCATCCATTTCGAAGGCTCAACCTGGTGCTCCACC...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTGGCTCATATTGGTTTTaGAGTAGAAAAGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGGSYWF*SRKGDG
Trigger: GCCATCTCCTTTTCTACTTCAAAACCAATATGAGCC...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACCCTCTAGTTTTTCACTaGACTCCTCAGTATAGGGAA +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNPLVFH*TPQYRE
Trigger: TTCCCTATACTGAGGAGTTCAGTGAAAAACTAGAGG...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACCAGAGACACCTCCTTTaGAGTCTGGGTTCCGACTCA +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNQRHLL*SLGSDS
Trigger: TGAGTCGGAACCCAGACTTCAAAGGAGGTGTCTCTG...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTGCTAACGTTACATACTaGCCATATAAGCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGANVTY*PYKQVL
Trigger: GAGTACCTGCTTATATGGTCAGTATGTAACGTTAGC...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACCTGCTGCCACTCAGCTaGCACATGCTTCTTCTACGA +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNLLPLS*HMLLLR
Trigger: TCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAG...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGAATCACTCGAATCTGTaGAGTTTCCTTGTCTTATAC +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGNHSNL*SFLVLY
Trigger: GTATAAGACAAGGAAACTGCACAGATTCGAGTGATT...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGCAGACAAGAAAGCACGCTTTACAACCCTaGGCCTTGTCTGTCCATCTT +
Preference number: 4 (lower is better)
Translates to: RIFSAMEVVLGLSVQTRKHALQP*ALSVHL
Trigger: AAGATGGACAGACAAGGCCCAGGGTTGTAAAGCGTG...CTTTCTTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTAAGTTTGATCAATGCTaGGGCTGTTCTGGACTAATG +
Preference number: 4 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGKFDQC*GCSGLM
Trigger: CATTAGTCCAGAACAGCCCCAGCATTGATCAAACTT...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGATTTTCTCAGCAATaGAAGTTGTACTGGGACTTT +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMGFSQQ*KLYWDF
Trigger: AAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCC...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR CAA 72 bp TTGGAACTTCAGCAACAAGGCAAGTGCACAGCTACCTaGGATGACAAAATGGAAAACCTCTCATCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LELQQQGKCTAT*DDKMENLSSAC
Trigger: GCAAGCAGATGAGAGGTTTTCCATTTTGTCATCCAAGGTAGCTGTGCACTTGCCTTGTTGCTGAAGTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR CAA 72 bp GGCCTCAGCTGTAGAATGAGGTGGCTGAAATCTATGTaGTCTGGAGTCAATTACAGCTCTACAATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GLSCRMRWLKSM*SGVNYSSTILL
Trigger: CAGCAAGATTGTAGAGCTGTAATTGACTCCAGACAACATAGATTTCAGCCACCTCATTCTACAGCTGAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp CTTCTATCAACAACAAATCCCAGCGGCCTAGGTTCTATTGAAGGCTTGACACAACCGCTCCACTGTGAATaGTGTTACTCACCAATGTAT +
Preference number: 4 (lower is better)
Translates to: LLSTTNPSGLGSIEGLTQPLHCE*CYSPMY
Trigger: ATACATTGGTGAGTAACATCATTCACAGTGGAGCGG...TTGTGTCAAGCCTTCAATAGAACCTAGGCCGCTGGGATTTGTTGTTGATAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR GCA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTTCCCAAAAGGATCACTaGTGCTTGATACCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCSQKDH*CLIPER
Trigger: TCTCTCAGGTATCAAGCAGCAGTGATCCTTTTGGGA...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTCTGCAGCTGGGGTGGTaGAATGTAAGGATTAGCCCT +
Preference number: 4 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNALQLGW*NVRISP
Trigger: AGGGCTAATCCTTACATTGCACCACCCCAGCTGCAG...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CTTCTATCAACAACAAATCCCAGCGGCCTAGGTTCTATTGAAGGCTTGACACAATGTATTCTACCTCCTTaGAGTAAAACCAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLSTTNPSGLGSIEGLTQCILPP*SKTSGA
Trigger: AGCCCCACTGGTTTTACTGCAAGGAGGTAGAATACA...TTGTGTCAAGCCTTCAATAGAACCTAGGCCGCTGGGATTTGTTGTTGATAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR GCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGATAACCTTTGGATTGTaGATAACAATTGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGITFGL*ITIVSP
Trigger: TGGAGAGACAATTGTTATGCACAATCCAAAGGTTAT...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACCACACACAGGTCCAATaGCATGCACCACAAACACCA +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNHTQVQ*HAPQTP
Trigger: TGGTGTTTGTGGTGCATGGCATTGGACCTGTGTGTG...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGCTTCCAGAGTTTCTTaGAAAGTTAGGACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMASRVS*KVRTSL
Trigger: TAAAGAAGTCCTAACTTTGCAAGAAACTCTGGAAGC...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACTTCTCCAATTCTTCTTaGAACTGGGTTGAAGACGTA +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNFSNSS*NWVEDV
Trigger: TACGTCTTCAACCCAGTTGCAAGAAGAATTGGAGAA...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGTCTGCTTCAACTACTTaGTTTTCTTCTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGSASTT*FSSSSL
Trigger: CAAAGAAGAAGAAGAAAAGCAAGTAGTTGAAGCAGA...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGCAGACAAGAAAGAACCTCTCATCTGCTTaGTTCTCCTCCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: RIFSAMEVVLGLSVQTRKNLSSA*FSSWKW
Trigger: CCATTTCCAGGAGGAGAAGCAAGCAGATGAGAGGTT...CTTTCTTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTATATGGATTGTATCCTaGTTGGGGAATTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCIWIVS*LGNSLG
Trigger: CCCCAAGGAATTCCCCAACCAGGATACAATCCATAT...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACTCCTCTTTGGCTCATTaGATTCTGAGGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNSSLAH*ILRGGK
Trigger: CTTCCCTCCCCTCAGAATCCAATGAGCCAAAGAGGA...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp TCCATATGCTTGGCATCTTCTATCAACAACAAATCCCAGCGGCCTAGGTTCTATGGCTCATATTGGTTTTaGAGTAGAAAAGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: SICLASSINNKSQRPRFYGSYWF*SRKGDG
Trigger: GCCATCTCCTTTTCTACTTCAAAACCAATATGAGCC...ATAGAACCTAGGCCGCTGGGATTTGTTGTTGATAGAAGATGCCAAGCATATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR TCA 90 bp GTGAACAGCATCAAAACAAGCTGTCTTGTAAGTAAAGTCCGCTCCACTGTGAATAAGTCCGCTCCACTGTaGATGATGTTACTCACCAAT +
Preference number: 4 (lower is better)
Translates to: VNSIKTSCLVSKVRSTVNKSAPL*MMLLTN
Trigger: ATTGGTGAGTAACATCATTCACAGTGGAGCGGACTT...ATTCACAGTGGAGCGGACTTTACTTACAAGACAGCTTGTTTTGATGCTGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR GCA 90 bp AGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGCAGACAAGAAAGTGTATTCTACCTCCTTaGAGTAAAACCAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RIFSAMEVVLGLSVQTRKCILPP*SKTSGA
Trigger: AGCCCCACTGGTTTTACTGCAAGGAGGTAGAATACA...CTTTCTTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACCTCATAAAGAGTGCATaGAGATGGTTTATCTCCATT +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNLIKSA*RWFISI
Trigger: AATGGAGATAAACCATCTGCATGCACTCTTTATGAG...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTTTCAGAGAGGCTAAGTaGTTCCAGAGTTTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCFREAK*FQSFLQ
Trigger: TTGCAAGAAACTCTGGAAGCACTTAGCCTCTCTGAA...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACACCTTTGACTTCAGATaGTGGCGCTTTTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNTFDFR*WRFLLF
Trigger: AAAAAGTAAAAAGCGCCAGCATCTGAAGTCAAAGGT...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACATACATGATCATCCCTaGCAAGATAGCGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNIHDHP*QDSGIS
Trigger: GGAGATGCCGCTATCTTGGCAGGGATGATCATGTAT...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACTTTCCACCAGAAAGCTaGTTGGTAAACACTAAAGTA +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNFPPES*LVNTKV
Trigger: TACTTTAGTGTTTACCAAGCAGCTTTCTGGTGGAAA...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTAGGGGTATGGCGATATaGATTGTATCCTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNARGMAI*IVSWLG
Trigger: CCCCAACCAGGATACAATCCATATCGCCATACCCCT...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGCAGACAAGAAAGATCCAAAGTCAGCTTTaGCTCTTCAGGCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: RIFSAMEVVLGLSVQTRKIQSQL*LFRHLL
Trigger: AAGCAGATGCCTGAAGAGCCAAAGCTGACTTTGGAT...CTTTCTTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACTTCTTCTACGAACCCTaGTCCTTCTCTGCCCATTAC +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNFFYEP*SFSAHY
Trigger: GTAATGGGCAGAGAAGGACCAGGGTTCGTAGAAGAA...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp GTGAACAGCATCAAAACAAGCTGTCTTGTAAGTAAAGTCCGCTCCACTGTGAATACGATTAGCACCTCATaGGTGATGACACCACTTAAA +
Preference number: 4 (lower is better)
Translates to: VNSIKTSCLVSKVRSTVNTISTS*VMTPLK
Trigger: TTTAAGTGGTGTCATCACTCATGAGGTGCTAATCGT...ATTCACAGTGGAGCGGACTTTACTTACAAGACAGCTTGTTTTGATGCTGTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR TCA 90 bp CCATATGCTTGGCATCTTCTATCAACAACAAATCCCAGCGGCCTAGGTTCTATTGTTCTATTGAAGGCTTaGCACAAGCACCTTATTAGA +
Preference number: 4 (lower is better)
Translates to: PYAWHLLSTTNPSGLGSIVLLKA*HKHLIR
Trigger: TCTAATAAGGTGCTTGTGTCAAGCCTTCAATAGAAC...AATAGAACCTAGGCCGCTGGGATTTGTTGTTGATAGAAGATGCCAAGCATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACTTCAACAACCTTTTCTaGTTCAACTACTTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNFNNLF*FNYLLF
Trigger: GAAAAGCAAGTAGTTGAAGCAGAAAAGGTTGTTGAA...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACACAGCTCTACAATCTTaGTGTTCTAATTCTACCATT +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNTALQS*CSNSTI
Trigger: AATGGTAGAATTAGAACAGCAAGATTGTAGAGCTGT...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTTATAGACTGAAATCCTaGAAGGTGGTTACAACAGTG +
Preference number: 4 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCYRLKS*KVVTTV
Trigger: CACTGTTGTAACCACCTTGCAGGATTTCAGTCTATA...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACTACATTCGGGAAATCTaGAAGAGTTGCTGTTTTATT +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNYIREI*KSCCFI
Trigger: AATAAAACAGCAACTCTTGCAGATTTCCCGAATGTA...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACTTGTCTGACAGTAGGTaGGGCTGTTATAAAATAAAA +
Preference number: 4 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNLSDSR*GCYKIK
Trigger: TTTTATTTTATAACAGCCCCACCTACTGTCAGACAA...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp GTAATCTTCTCTGTGAACAGCATCAAAACAAGCTGTCTTGTAAGTAAAGTCCGCCCTCTAGTTTTTCACTaGACTCCTCAGTATAGGGAA +
Preference number: 4 (lower is better)
Translates to: VIFSVNSIKTSCLVSKVRPLVFH*TPQYRE
Trigger: TTCCCTATACTGAGGAGTTCAGTGAAAAACTAGAGG...GCGGACTTTACTTACAAGACAGCTTGTTTTGATGCTGTTCACAGAGAAGATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR TCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACTCTTCTTCTTTGATCTaGTTGGCCACCTTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNSSSLI*LATFSN
Trigger: ATTGGAGAAGGTGGCCAATCAGATCAAAGAAGAAGA...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGCAGACAAGAAAGTTTCTTCTTCTTCTTTaGTCTGATTGGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: RIFSAMEVVLGLSVQTRKFLLLL*SDWPPS
Trigger: AGAAGGTGGCCAATCAGATCAAAGAAGAAGAAGAAA...CTTTCTTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp TCCATATGCTTGGCATCTTCTATCAACAACAAATCCCAGCGGCCTAGGTTCTATACCTTATTAGATCTGTaGTGTGTCTCTGCAAATCAT +
Preference number: 4 (lower is better)
Translates to: SICLASSINNKSQRPRFYTLLDL*CVSANH
Trigger: ATGATTTGCAGAGACACATCACAGATCTAATAAGGT...ATAGAACCTAGGCCGCTGGGATTTGTTGTTGATAGAAGATGCCAAGCATATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR GCA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTGAAGGAACTCCACTCTaGTTACTTTCCCGTCATCTA +
Preference number: 4 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNAEGTPL*LLSRHL
Trigger: TAGATGACGGGAAAGTAAGCAGAGTGGAGTTCCTTC...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTAGTAGTCCTCATCCTTaGAAAAATCTGGACTTTCAA +
Preference number: 4 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCSSPHP*KNLDFQ
Trigger: TTGAAAGTCCAGATTTTTCCAAGGATGAGGACTACT...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACCAATGGAAGTTGTACTaGGACTTTCTGTGCAGACAA +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNQWKLY*DFLCRQ
Trigger: TTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTG...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGCAGACAAGAAAGCCTTGGATGACAAAATaGAAAACCTCTCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: RIFSAMEVVLGLSVQTRKPWMTK*KTSHLL
Trigger: AAGCAGATGAGAGGTTTTCCATTTTGTCATCCAAGG...CTTTCTTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTTGGTTTTCACATTATTaGAACTTCAGCAACAAGGCA +
Preference number: 4 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCWFSHY*NFSNKA
Trigger: TGCCTTGTTGCTGAAGTTCCAATAATGTGAAAACCA...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTTTTGACTTCAGATGCTaGCGCTTTTTACTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCFDFRC*RFLLFV
Trigger: CACAAAAAGTAAAAAGCGCCAGCATCTGAAGTCAAA...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACGAAAACATGCTTGTCTaGTTGGATTCAAGAAGCACG +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNENMLV*LDSRST
Trigger: CGTGCTTCTTGAATCCAACCAGACAAGCATGTTTTC...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp GTAATCTTCTCTGTGAACAGCATCAAAACAAGCTGTCTTGTAAGTAAAGTCCGCCGGATCTGGCTGAACTaGATTATAGATTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VIFSVNSIKTSCLVSKVRRIWLN*IIDFFK
Trigger: CTTGAAGAAATCTATAATTCAGTTCAGCCAGATCCG...GCGGACTTTACTTACAAGACAGCTTGTTTTGATGCTGTTCACAGAGAAGATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR TCA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTAGTAAAACTGAAGTTTaGTCAATGCTGGGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNASKTEV*SMLGLF
Trigger: GAACAGCCCCAGCATTGATCAAACTTCAGTTTTACT...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTCCGACTCATAAAGAGTaGATGCAGATGGTTTATCTC +
Preference number: 4 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNAPTHKE*MQMVYL
Trigger: GAGATAAACCATCTGCATGCACTCTTTATGAGTCGG...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp CTTCTATCAACAACAAATCCCAGCGGCCTAGGTTCTATTGAAGGCTTGACACAATTGAAAATGTCCATATaGTTGGCATCTTCTATCAAC +
Preference number: 4 (lower is better)
Translates to: LLSTTNPSGLGSIEGLTQLKMSI*LASSIN
Trigger: GTTGATAGAAGATGCCAAGCATATGGACATTTTCAA...TTGTGTCAAGCCTTCAATAGAACCTAGGCCGCTGGGATTTGTTGTTGATAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR CCA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTAGTGCACAGCTACCTTaGATGACAAAATGGAAAACC +
Preference number: 4 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNASAQLP*MTKWKT
Trigger: GGTTTTCCATTTTGTCATCCAAGGTAGCTGTGCACT...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACATTTTCAGTGTTCTCTaGGACCAATACATTCGGGAA +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNIFSVL*DQYIRE
Trigger: TTCCCGAATGTATTGGTCCCAGAGAACACTGAAAAT...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACGCCAAACTCTACACATaGAACACTTTTGGAATAACT +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNAKLYT*NTFGIT
Trigger: AGTTATTCCAAAAGTGTTTCATGTGTAGAGTTTGGC...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACAACTCATTTAATGTCTaGCAAGCACTTTTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNNSFNV*QALLRE
Trigger: CTCTCTCAAAAGTGCTTGGCAGACATTAAATGAGTT...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR GCA 90 bp AGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGCAGACAAGAAAGTTCTTGAAAATAAGGTaGATCTCACTTCTTTCCACA +
Preference number: 4 (lower is better)
Translates to: RIFSAMEVVLGLSVQTRKFLKIR*ISLLST
Trigger: TGTGGAAAGAAGTGAGATGCACCTTATTTTCAAGAA...CTTTCTTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CCA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTAAGAGTGCATGCAGATaGTTTATCTCCATTCCTACT +
Preference number: 4 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNAKSACR*FISIPT
Trigger: AGTAGGAATGGAGATAAACCATCTGCATGCACTCTT...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR TCA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTTATCAAGGTACTACCTaGGACTGGGCAATTTATAAA +
Preference number: 4 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNAYQGTT*DWAIYK
Trigger: TTTATAAATTGCCCAGTCTCAGGTAGTACCTTGATA...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
3UTR CAA 72 bp GGCACATGGGGATTCACTGTACCATTCTCCATACTTTaGAGTATTTGTGAAAATTCCATAGTAAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: GTWGFTVPFSIL*SICENSIVRSF
Trigger: AAAAGACCTTACTATGGAATTTTCACAAATACTCAAAAGTATGGAGAATGGTACAGTGAATCCCCATGTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS GCA 90 bp GGAGGCGCCGCCGCTGCCACCGTTAGGTTTTCTCTCGGCCATGGCTaGGGCCCACCGTCCGATACACGTCTCCGGGTACCCGGTACCACA +
Preference number: 5 (lower is better)
Translates to: GGAAAATVRFSLGHG*GPPSDTRLRVPGTT
Trigger: TGTGGTACCGGGTACCCGGAGACGTGTATCGGACGGTGGGCCGCAGCCATGGCCGAGAGAAAACCTAACGGTGGCAGCGGCGGCGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS CCA 90 bp GAATCCTCTCCCGGTAAGAGCAGGGAGGCCGGAGAAGCGGAGGCCTaGGTGACTGGGATGAAGGGCACATTGAAGCTGAACTCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: ESSPGKSREAGEAEA*VTGMKGTLKLNSVA
Trigger: GGCCACGGAGTTCAGCTTCAATGTGCCCTTCATCCCAGTCACCCAGGCCTCCGCTTCTCCGGCCTCCCTGCTCTTACCGGGAGAGGATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS GCA 90 bp ATGAGCAGGAGGGCCTGGTGTTTGGCACTGCTGCAGCTGGGGTGGTaGAATGTAAGGATTAGCCCTGCTGCTGCCAGGGGTATGGCGATA +
Preference number: 5 (lower is better)
Translates to: MSRRAWCLALLQLGW*NVRISPAAARGMAI
Trigger: TATCGCCATACCCCTGGCAGCAGCAGGGCTAATCCTTACATTGCACCACCCCAGCTGCAGCAGTGCCAAACACCAGGCCCTCCTGCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGAGGTGGAGCACCAGGTaGAGCCTTCGAAATGGATGG +
Preference number: 5 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWRWSTR*SLRNGW
Trigger: CCATCCATTTCGAAGGCTCAACCTGGTGCTCCACCT...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTAGGAGGGCCTGGTGTTaGGCACTGCTGCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGRRAWC*ALLQLG
Trigger: CCCCAGCTGCAGCAGTGCCAAACACCAGGCCCTCCT...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS CCA 90 bp CAATTCCACGCTTTACAACCCTGGGCCTTGTCTGTCCATCTTGCGTaGTGCCCCATTCATCTGGCACTGAGGAGGGCTGGAACTGAACAA +
Preference number: 5 (lower is better)
Translates to: QFHALQPWALSVHLA*CPIHLALRRAGTEQ
Trigger: TTGTTCAGTTCCAGCCCTCCTCAGTGCCAGATGAATGGGGCACCACGCAAGATGGACAGACAAGGCCCAGGGTTGTAAAGCGTGGAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000446561.1
CDS CCA 90 bp GGCTCATTGGATTCTGAGGGGAGGGAAGCCATGTCTTTAGTCTTCTaGGCACTTTGCTCTTGTCCTTTTGTAGAAGTGGCCGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: GSLDSEGREAMSLVF*ALCSCPFVEVAATA
Trigger: GGCAGTGGCGGCCACTTCTACAAAAGGACAAGAGCAAAGTGCCCAGAAGACTAAAGACATGGCTTCCCTCCCCTCAGAATCCAATGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGCACCAAATGGTCAACTaGAGGCATCTCCCCGTCGGG +
Preference number: 5 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMHQMVN*RHLPVG
Trigger: CCCGACGGGGAGATGCCTCAAGTTGACCATTTGGTG...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGCATCCAAAGTCAGCTTaGGCTCTTCAGGCATCTGCT +
Preference number: 5 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWHPKSA*ALQASA
Trigger: AGCAGATGCCTGAAGAGCCAAAGCTGACTTTGGATG...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS TCA 90 bp GGGCCTTGTCTGTCCATCTTGCGTGGTGCCCCATTCATCTGGCACTaGGGAGGGCTGGAACTGAACAATAACCTTTGGATTGTGCATAAC +
Preference number: 5 (lower is better)
Translates to: GPCLSILRGAPFIWH*GGLELNNNLWIVHN
Trigger: GTTATGCACAATCCAAAGGTTATTGTTCAGTTCCAGCCCTCCTCAGTGCCAGATGAATGGGGCACCACGCAAGATGGACAGACAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGTTACAACCCTGGGCCTaGTCTGTCCATCTTGCGTGG +
Preference number: 5 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMLQPWA*SVHLAW
Trigger: CCACGCAAGATGGACAGACAAGGCCCAGGGTTGTAA...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGTGGATTGTATCCTGGTaGGGGAATTCCTTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGWIVSW*GNSLGL
Trigger: CAACCCCAAGGAATTCCCCAACCAGGATACAATCCA...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACAAAAGGAGATGGCACTaGAACAGAGGGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNKRRWH*NRGSPR
Trigger: CCTGGGGCTCCCTCTGTTCAAGTGCCATCTCCTTTT...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AAAGGGCAAGACTGCTGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGGAAAGCAGGTTCCTCTaGTCATACAGCACGTTAACA +
Preference number: 5 (lower is better)
Translates to: KGQDCCHSAATCFFYEPWESRFL*SYSTLT
Trigger: TGTTAACGTGCTGTATGACAAGAGGAACCTGCTTTC...CCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCAGCAGTCTTGCCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS TCA 90 bp TTCCTGTCCACACCTGTGGCGTCCCCACCCAAAGAACTATGCCAATaGACTGGAAGGAACTCCACTCTGCTTACTTTCCCGTCATCTAAA +
Preference number: 5 (lower is better)
Translates to: FLSTPVASPPKELCQ*TGRNSTLLTFPSSK
Trigger: TTTAGATGACGGGAAAGTAAGCAGAGTGGAGTTCCTTCCAGTTCATTGGCATAGTTCTTTGGGTGGGGACGCCACAGGTGTGGACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000462222.1
CDS GCA 90 bp TCCTTATTCGGTCATAGAGGTAAACATCGTAGCGCCCTCCATCCGTaGCAAGAACCACGCTCTCCGGATCTGGCTGAACTGAATTATAGA +
Preference number: 5 (lower is better)
Translates to: SLFGHRGKHRSALHP*QEPRSPDLAELNYR
Trigger: TCTATAATTCAGTTCAGCCAGATCCGGAGAGCGTGGTTCTTGGCACGGATGGAGGGCGCTACGATGTTTACCTCTATGACCGAATAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369075.8
ENST00000442952.1
ENST00000446561.1
CDS GCA 90 bp CCACTCAGCTGCCACATGCTTCTTCTACGAACCCTGGTCCTTCTCTaGCCATTACTCAGAAGACAGGCTTGGATGACAAAATGGAAAACC +
Preference number: 5 (lower is better)
Translates to: PLSCHMLLLRTLVLL*PLLRRQAWMTKWKT
Trigger: GGTTTTCCATTTTGTCATCCAAGCCTGTCTTCTGAGTAATGGGCAGAGAAGGACCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483890.1
CDS CCA 90 bp CGGGAATTTCATCAAGGTTATCATCAATTCCACGCTTTACAACCCTaGGCCTTGTCTGTCCATCTTGCGTGGTGCCCCATTCATCTGGCA +
Preference number: 5 (lower is better)
Translates to: REFHQGYHQFHALQP*ALSVHLAWCPIHLA
Trigger: TGCCAGATGAATGGGGCACCACGCAAGATGGACAGACAAGGCCCAGGGTTGTAAAGCGTGGAATTGATGATAACCTTGATGAAATTCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000446561.1
CDS-3UTR CAA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACACAGAGACACCTCCTTaGAAGTCTGGGTTCCGACTC +
Preference number: 5 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNTETPP*KSGFRL
Trigger: GAGTCGGAACCCAGACTTCAAAGGAGGTGTCTCTGT...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACAAGGAGGGAGACTACTaGGCTGAGAAGGCAGATAAG +
Preference number: 5 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNKEGDY*AEKADK
Trigger: CTTATCTGCCTTCTCAGCCAAGTAGTCTCCCTCCTT...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACGGGATGAAGGGCACATaGAAGCTGAACTCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNGMKGT*KLNSVA
Trigger: GGCCACGGAGTTCAGCTTCAATGTGCCCTTCATCCC...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGATTGTCCAACTGAGGTaGCTGCAGTTGTTAATGGTG +
Preference number: 5 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMIVQLR*LQLLMV
Trigger: CACCATTAACAACTGCAGCAACCTCAGTTGGACAAT...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp GTGAACAGCATCAAAACAAGCTGTCTTGTAAGTAAAGTCCGCTCCACTGTGAATAAAAGGAGATGGCACTaGAACAGAGGGAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: VNSIKTSCLVSKVRSTVNKRRWH*NRGSPR
Trigger: CCTGGGGCTCCCTCTGTTCAAGTGCCATCTCCTTTT...ATTCACAGTGGAGCGGACTTTACTTACAAGACAGCTTGTTTTGATGCTGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR CAA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGTGTGTCCGCAGCAATTaGAGAGAAACCACCCTAAAA +
Preference number: 5 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMCVRSN*RETTLK
Trigger: TTTTAGGGTGGTTTCTCTCAAATTGCTGCGGACACA...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTCTGGAAGTTTCCTCTTaGGCTCATTGGATTCTGAGG +
Preference number: 5 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGLEVSS*AHWILR
Trigger: CCTCAGAATCCAATGAGCCAAAGAGGAAACTTCCAG...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTCTTCTTGCAACTGGGTaGAAGACGTATGAGCACGGG +
Preference number: 5 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCLLATG*KTYEHG
Trigger: CCCGTGCTCATACGTCTTCAACCCAGTTGCAAGAAG...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACTCTCAGCAATGGAAGTaGTACTGGGACTTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNSQQWK*YWDFLC
Trigger: GCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGA...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp TACATGATCATCCCTGCCAAGATAGCGGCATCTCCTCCTTTTCATGTACAGGGTAAACCTCTCATCTGCTaGCTTCTCCTCCTGGAAATG +
Preference number: 5 (lower is better)
Translates to: YMIIPAKIAASPPFHVQGKPLIC*LLLLEM
Trigger: CATTTCCAGGAGGAGAAGCAAGCAGATGAGAGGTTT...ACCCTGTACATGAAAAGGAGGAGATGCCGCTATCTTGGCAGGGATGATCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTCTGGGCACTTTGCTCTaGTCCTTTTGTAGAAGTGGC +
Preference number: 5 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCLGTLL*SFCRSG
Trigger: GCCACTTCTACAAAAGGACAAGAGCAAAGTGCCCAG...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS TCA 90 bp TTGGCCACCTTCTCCAATTCTTCTTGCAACTGGGTTGAAGACGTATaGGCACGGGCAAACTCATTTAATGTCTGCCAAGCACTTTTGAGA +
Preference number: 5 (lower is better)
Translates to: LATFSNSSCNWVEDV*ARANSFNVCQALLR
Trigger: TCTCAAAAGTGCTTGGCAGACATTAAATGAGTTTGCCCGTGCTCATACGTCTTCAACCCAGTTGCAAGAAGAATTGGAGAAGGTGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000475542.1
CDS-3UTR CAA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGCTCTATTGGTTTTTCTaGGAGAACGTAGTCAATTCG +
Preference number: 5 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMLYWFF*ENVVNS
Trigger: CGAATTGACTACGTTCTCCAAGAAAAACCAATAGAG...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTATGACTCTTTCACCTTaGACTTCAGATGCTGGCGCT +
Preference number: 5 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCMTLSP*TSDAGA
Trigger: AGCGCCAGCATCTGAAGTCAAAGGTGAAAGAGTCAT...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTAACATGCTTGTCTGGTaGGATTCAAGAAGCACGCGT +
Preference number: 5 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCNMLVW*DSRSTR
Trigger: ACGCGTGCTTCTTGAATCCAACCAGACAAGCATGTT...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGGGTCTTATACTGTGGTTTaGAGAAAACATGCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: SQIIITDTTPEAGKRAHGSYTVV*RKHACL
Trigger: CAGACAAGCATGTTTTCTCAAAACCACAGTATAAGA...CCCATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTAAGGATCACTGCTGCTaGATACCTGAGAGAAGTAAC +
Preference number: 5 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCKDHCC*IPERSN
Trigger: GTTACTTCTCTCAGGTATCAAGCAGCAGTGATCCTT...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp GTGAACAGCATCAAAACAAGCTGTCTTGTAAGTAAAGTCCGCTCCACTGTGAATGGCATCCACAGTTGTTaGTATTCTACCTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: VNSIKTSCLVSKVRSTVNGIHSC*YSTSLQ
Trigger: CTGCAAGGAGGTAGAATACAAACAACTGTGGATGCC...ATTCACAGTGGAGCGGACTTTACTTACAAGACAGCTTGTTTTGATGCTGTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR CAA 90 bp AGAGCCAAATCATTATCACTGACACCACCCCTGAAGCTGGGAAAAGGGCACATGTCATCTAAAGATTTCTaGAAATGTGTCCGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: RAKSLSLTPPLKLGKGHMSSKDF*KCVRSN
Trigger: ATTGCTGCGGACACATTTCAAGAAATCTTTAGATGA...CATGTGCCCTTTTCCCAGCTTCAGGGGTGGTGTCAGTGATAATGATTTGGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACTTCCTCTTTGGCTCATaGGATTCTGAGGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNFLFGS*DSEGRE
Trigger: TTCCCTCCCCTCAGAATCCAATGAGCCAAAGAGGAA...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp CTCACAGTTCTGCATGGTTGGGGAGACCTCAGGAAACTTACAATCATGACGAACATCTGTGCAGTTTCCTaGTCTTATACTGTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: LTVLHGWGDLRKLTIMTNICAVS*SYTVVL
Trigger: CAAAACCACAGTATAAGACAAGGAAACTGCACAGAT...GTTCGTCATGATTGTAAGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTCACAGTTCTGCATGGTaGGGGAGACCTCAGGAAACT +
Preference number: 5 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNAHSSAW*GRPQET
Trigger: AGTTTCCTGAGGTCTCCCCAACCATGCAGAACTGTG...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACCTGAGGTTGCTGCAGTaGTTAATGGTGACTGTCCAA +
Preference number: 5 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNLRLLQ*LMVTVQ
Trigger: TTGGACAGTCACCATTAACAACTGCAGCAACCTCAG...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTAACGAATATGTAGCATaGCCCACTATCTCACAGATG +
Preference number: 5 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCNEYVA*PTISQM
Trigger: CATCTGTGAGATAGTGGGCAATGCTACATATTCGTT...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS GCA 90 bp AACAGAGACACCTCCTTTGAAGTCTGGGTTCCGACTCATAAAGAGTaGATGCAGATGGTTTATCTCCATTCCTACTTTTTCCACAATTGT +
Preference number: 5 (lower is better)
Translates to: NRDTSFEVWVPTHKE*MQMVYLHSYFFHNC
Trigger: ACAATTGTGGAAAAAGTAGGAATGGAGATAAACCATCTGCATGCACTCTTTATGAGTCGGAACCCAGACTTCAAAGGAGGTGTCTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACGTATGGCGATATGGATaGTATCCTGGTTGGGGAATT +
Preference number: 5 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNVWRYG*YPGWGI
Trigger: AATTCCCCAACCAGGATACAATCCATATCGCCATAC...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTGGCATCCACAGTTGTTaGTATTCTACCTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNAGIHSC*YSTSLQ
Trigger: CTGCAAGGAGGTAGAATACAAACAACTGTGGATGCC...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTAAAAGGCATCCACAGTaGTTTGTATTCTACCTCCTT +
Preference number: 5 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCKRHPQ*FVFYLL
Trigger: AAGGAGGTAGAATACAAACAACTGTGGATGCCTTTT...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp TCCATATGCTTGGCATCTTCTATCAACAACAAATCCCAGCGGCCTAGGTTCTATAAAAGGCATCCACAGTaGTTTGTATTCTACCTCCTT +
Preference number: 5 (lower is better)
Translates to: SICLASSINNKSQRPRFYKRHPQ*FVFYLL
Trigger: AAGGAGGTAGAATACAAACAACTGTGGATGCCTTTT...ATAGAACCTAGGCCGCTGGGATTTGTTGTTGATAGAAGATGCCAAGCATATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442952.1
CDS-3UTR CAA 90 bp AGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTGCAGACAAGAAAGCAATTGTCTCTCCACTaGGAAACTCTAATCTTCGGT +
Preference number: 5 (lower is better)
Translates to: RIFSAMEVVLGLSVQTRKQLSLH*ETLIFG
Trigger: ACCGAAGATTAGAGTTTCCAAGTGGAGAGACAATTG...CTTTCTTGTCTGCACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACGCTTCCCAGGACTTCTaGAAAATAAGGTGCATCTCA +
Preference number: 5 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNASQDF*KIRCIS
Trigger: TGAGATGCACCTTATTTTCAAGAAGTCCTGGGAAGC...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTTGCATTCGAGACATCTaGGGATCCAGTTGTAAAAGG +
Preference number: 5 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNACIRDI*GSSCKR
Trigger: CCTTTTACAACTGGATCCCAAGATGTCTCGAATGCA...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp GGAAAGTCCTCTGAGGATTTTCTCAGCAATGGAAGTTGTACTGGGACTTTCTGTATTGTGGCTGAGCAATaGTTAATGAATCACTCTTCT +
Preference number: 5 (lower is better)
Translates to: GKSSEDFLSNGSCTGTFCIVAEQ*LMNHSS
Trigger: AGAAGAGTGATTCATTAACAATTGCTCAGCCACAAT...ACAGAAAGTCCCAGTACAACTTCCATTGCTGAGAAAATCCTCAGAGGACTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTCCACCAGAAAGCTGCTaGGTAAACACTAAAGTACAG +
Preference number: 5 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNAPPESC*VNTKVQ
Trigger: CTGTACTTTAGTGTTTACCAAGCAGCTTTCTGGTGG...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTTGGCTGAAATCTATGTaGTCTGGAGTCAATTACAGC +
Preference number: 5 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNAWLKSM*SGVNYS
Trigger: GCTGTAATTGACTCCAGACAACATAGATTTCAGCCA...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp AATCACACTCAACACATTCACATAGCTCTCTCTCTGCATTTCGTGCTTAACAACGAGGTCCAGGGCACTTaGATAAATTCAAATCTTTTT +
Preference number: 5 (lower is better)
Translates to: NHTQHIHIALSLHFVLNNEVQGT*INSNLF
Trigger: AAAAAGATTTGAATTTATCAAAGTGCCCTGGACCTC...GTTGTTAAGCACGAAATGCAGAGAGAGAGCTATGTGAATGTGTTGAGTGTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS-3UTR CAA 90 bp CATCCTAGGTTTTCTGGGATAATCTTCAGTACTCTTATCATGAGACCAAATGCTTTGGTTTTCACATTATaGGAACTTCAGCAACAAGGC +
Preference number: 5 (lower is better)
Translates to: HPRFSGIIFSTLIMRPNALVFTL*ELQQQG
Trigger: GCCTTGTTGCTGAAGTTCCAATAATGTGAAAACCAA...AGCATTTGGTCTCATGATAAGAGTACTGAAGATTATCCCAGAAAACCTAGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS GCA 72 bp GCCGCTGCCACCGTTAGGTTTTCTCTCGGCCATGGCTaGGGCCCACCGTCCGATACACGTCTCCGGGTACCC +
Preference number: 6 (lower is better)
Translates to: AAATVRFSLGHG*GPPSDTRLRVP
Trigger: GGGTACCCGGAGACGTGTATCGGACGGTGGGCCGCAGCCATGGCCGAGAGAAAACCTAACGGTGGCAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS CCA 72 bp CCCGGTAAGAGCAGGGAGGCCGGAGAAGCGGAGGCCTaGGTGACTGGGATGAAGGGCACATTGAAGCTGAAC +
Preference number: 6 (lower is better)
Translates to: PGKSREAGEAEA*VTGMKGTLKLN
Trigger: GTTCAGCTTCAATGTGCCCTTCATCCCAGTCACCCAGGCCTCCGCTTCTCCGGCCTCCCTGCTCTTACCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000470478.1
CDS GCA 72 bp AGGGCCTGGTGTTTGGCACTGCTGCAGCTGGGGTGGTaGAATGTAAGGATTAGCCCTGCTGCTGCCAGGGGT +
Preference number: 6 (lower is better)
Translates to: RAWCLALLQLGW*NVRISPAAARG
Trigger: ACCCCTGGCAGCAGCAGGGCTAATCCTTACATTGCACCACCCCAGCTGCAGCAGTGCCAAACACCAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS CAA 90 bp GAGGCCGGAGAAGCGGAGGCCTGGGTGACTGGGATGAAGGGCACATaGAAGCTGAACTCCGTGGCCGAGGAGGAGAAAAGTAAGTTAGTG +
Preference number: 6 (lower is better)
Translates to: EAGEAEAWVTGMKGT*KLNSVAEEEKSKLV
Trigger: CACTAACTTACTTTTCTCCTCCTCGGCCACGGAGTTCAGCTTCAATGTGCCCTTCATCCCAGTCACCCAGGCCTCCGCTTCTCCGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000470478.1
CDS CCA 72 bp GCTTTACAACCCTGGGCCTTGTCTGTCCATCTTGCGTaGTGCCCCATTCATCTGGCACTGAGGAGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: ALQPWALSVHLA*CPIHLALRRAG
Trigger: TCCAGCCCTCCTCAGTGCCAGATGAATGGGGCACCACGCAAGATGGACAGACAAGGCCCAGGGTTGTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000446561.1
CDS CAA 72 bp GAAGCGGAGGCCTGGGTGACTGGGATGAAGGGCACATaGAAGCTGAACTCCGTGGCCGAGGAGGAGAAAAGT +
Preference number: 6 (lower is better)
Translates to: EAEAWVTGMKGT*KLNSVAEEEKS
Trigger: ACTTTTCTCCTCCTCGGCCACGGAGTTCAGCTTCAATGTGCCCTTCATCCCAGTCACCCAGGCCTCCGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000470478.1
CDS GCA 72 bp GGTCATAGAGGTAAACATCGTAGCGCCCTCCATCCGTaGCAAGAACCACGCTCTCCGGATCTGGCTGAACTG +
Preference number: 6 (lower is better)
Translates to: GHRGKHRSALHP*QEPRSPDLAEL
Trigger: CAGTTCAGCCAGATCCGGAGAGCGTGGTTCTTGGCACGGATGGAGGGCGCTACGATGTTTACCTCTATGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369075.8
ENST00000442952.1
ENST00000446561.1
CDS GCA 72 bp TTACAACCCTGGGCCTTGTCTGTCCATCTTGCGTGGTaGCCCATTCATCTGGCACTGAGGAGGGCTGGAACT +
Preference number: 6 (lower is better)
Translates to: LQPWALSVHLAW*PIHLALRRAGT
Trigger: AGTTCCAGCCCTCCTCAGTGCCAGATGAATGGGGCACCACGCAAGATGGACAGACAAGGCCCAGGGTTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000446561.1
CDS TCA 72 bp ACACCTGTGGCGTCCCCACCCAAAGAACTATGCCAATaGACTGGAAGGAACTCCACTCTGCTTACTTTCCCG +
Preference number: 6 (lower is better)
Translates to: TPVASPPKELCQ*TGRNSTLLTFP
Trigger: CGGGAAAGTAAGCAGAGTGGAGTTCCTTCCAGTTCATTGGCATAGTTCTTTGGGTGGGGACGCCACAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000462222.1
CDS CCA 72 bp TGCCACTCAGCTGCCACATGCTTCTTCTACGAACCCTaGTCCTTCTCTGCCCATTACTCAGAAGACAGGCTT +
Preference number: 6 (lower is better)
Translates to: CHSAATCFFYEP*SFSAHYSEDRL
Trigger: AAGCCTGTCTTCTGAGTAATGGGCAGAGAAGGACCAGGGTTCGTAGAAGAAGCATGTGGCAGCTGAGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483890.1
CDS TCA 72 bp CTGTCCATCTTGCGTGGTGCCCCATTCATCTGGCACTaGGGAGGGCTGGAACTGAACAATAACCTTTGGATT +
Preference number: 6 (lower is better)
Translates to: LSILRGAPFIWH*GGLELNNNLWI
Trigger: AATCCAAAGGTTATTGTTCAGTTCCAGCCCTCCTCAGTGCCAGATGAATGGGGCACCACGCAAGATGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS CCA 72 bp TGTGGCGTCCCCACCCAAAGAACTATGCCAATGAACTaGAAGGAACTCCACTCTGCTTACTTTCCCGTCATC +
Preference number: 6 (lower is better)
Translates to: CGVPTQRTMPMN*KELHSAYFPVI
Trigger: GATGACGGGAAAGTAAGCAGAGTGGAGTTCCTTCCAGTTCATTGGCATAGTTCTTTGGGTGGGGACGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000462222.1
CDS CAA 72 bp GGTTATCATCAATTCCACGCTTTACAACCCTGGGCCTaGTCTGTCCATCTTGCGTGGTGCCCCATTCATCTG +
Preference number: 6 (lower is better)
Translates to: GYHQFHALQPWA*SVHLAWCPIHL
Trigger: CAGATGAATGGGGCACCACGCAAGATGGACAGACAAGGCCCAGGGTTGTAAAGCGTGGAATTGATGATAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000446561.1
CDS CAA 72 bp CAGAAGACACGCAAGCACCAACTGGAAGTTTCCTCTTaGGCTCATTGGATTCTGAGGGGAGGGAAGCCATGT +
Preference number: 6 (lower is better)
Translates to: QKTRKHQLEVSS*AHWILRGGKPC
Trigger: ACATGGCTTCCCTCCCCTCAGAATCCAATGAGCCAAAGAGGAAACTTCCAGTTGGTGCTTGCGTGTCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS CAA 90 bp TTTCATCAAGGTTATCATCAATTCCACGCTTTACAACCCTGGGCCTaGTCTGTCCATCTTGCGTGGTGCCCCATTCATCTGGCACTGAGG +
Preference number: 6 (lower is better)
Translates to: FHQGYHQFHALQPWA*SVHLAWCPIHLALR
Trigger: CCTCAGTGCCAGATGAATGGGGCACCACGCAAGATGGACAGACAAGGCCCAGGGTTGTAAAGCGTGGAATTGATGATAACCTTGATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000446561.1
CDS CAA 90 bp ACAGAAGACACGCAAGCACCAACTGGAAGTTTCCTCTTTGGCTCATaGGATTCTGAGGGGAGGGAAGCCATGTCTTTAGTCTTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: TEDTQAPTGSFLFGS*DSEGREAMSLVFWA
Trigger: TGCCCAGAAGACTAAAGACATGGCTTCCCTCCCCTCAGAATCCAATGAGCCAAAGAGGAAACTTCCAGTTGGTGCTTGCGTGTCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS CCA 72 bp GTGAGGAAGGTGGAGCACCAGGTTGAGCCTTCGAAATaGATGGTGAAAATGCATTCGAGACATCTTGGGATC +
Preference number: 6 (lower is better)
Translates to: VRKVEHQVEPSK*MVKMHSRHLGI
Trigger: GATCCCAAGATGTCTCGAATGCATTTTCACCATCCATTTCGAAGGCTCAACCTGGTGCTCCACCTTCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS CCA 72 bp CATCAAGGTTATCATCAATTCCACGCTTTACAACCCTaGGCCTTGTCTGTCCATCTTGCGTGGTGCCCCATT +
Preference number: 6 (lower is better)
Translates to: HQGYHQFHALQP*ALSVHLAWCPI
Trigger: AATGGGGCACCACGCAAGATGGACAGACAAGGCCCAGGGTTGTAAAGCGTGGAATTGATGATAACCTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000446561.1
CDS CAA 72 bp GGAAGCCATGTCTTTAGTCTTCTGGGCACTTTGCTCTaGTCCTTTTGTAGAAGTGGCCGCCACTGCCTTCTT +
Preference number: 6 (lower is better)
Translates to: GSHVFSLLGTLL*SFCRSGRHCLL
Trigger: AAGAAGGCAGTGGCGGCCACTTCTACAAAAGGACAAGAGCAAAGTGCCCAGAAGACTAAAGACATGGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS CAA 72 bp ACGCAAGCACCAACTGGAAGTTTCCTCTTTGGCTCATaGGATTCTGAGGGGAGGGAAGCCATGTCTTTAGTC +
Preference number: 6 (lower is better)
Translates to: TQAPTGSFLFGS*DSEGREAMSLV
Trigger: GACTAAAGACATGGCTTCCCTCCCCTCAGAATCCAATGAGCCAAAGAGGAAACTTCCAGTTGGTGCTTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS CCA 72 bp ACTGTGACCAGCAACAGAGACACCTCCTTTGAAGTCTaGGTTCCGACTCATAAAGAGTGCATGCAGATGGTT +
Preference number: 6 (lower is better)
Translates to: TVTSNRDTSFEV*VPTHKECMQMV
Trigger: AACCATCTGCATGCACTCTTTATGAGTCGGAACCCAGACTTCAAAGGAGGTGTCTCTGTTGCTGGTCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS CAA 72 bp GATTGGCCACCTTCTCCAATTCTTCTTGCAACTGGGTaGAAGACGTATGAGCACGGGCAAACTCATTTAATG +
Preference number: 6 (lower is better)
Translates to: DWPPSPILLATG*KTYEHGQTHLM
Trigger: CATTAAATGAGTTTGCCCGTGCTCATACGTCTTCAACCCAGTTGCAAGAAGAATTGGAGAAGGTGGCCAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000475542.1
CDS TCA 72 bp TTCTCCAATTCTTCTTGCAACTGGGTTGAAGACGTATaGGCACGGGCAAACTCATTTAATGTCTGCCAAGCA +
Preference number: 6 (lower is better)
Translates to: FSNSSCNWVEDV*ARANSFNVCQA
Trigger: TGCTTGGCAGACATTAAATGAGTTTGCCCGTGCTCATACGTCTTCAACCCAGTTGCAAGAAGAATTGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000475542.1
CDS CAA 72 bp TGGGGAATCCTGATTGTCCAACTGAGGTTGCTGCAGTaGTTAATGGTGACTGTCCAATATTCCCAAAAGGAT +
Preference number: 6 (lower is better)
Translates to: WGILIVQLRLLQ*LMVTVQYSQKD
Trigger: ATCCTTTTGGGAATATTGGACAGTCACCATTAACAACTGCAGCAACCTCAGTTGGACAATCAGGATTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS GCA 72 bp CCTTTGAAGTCTGGGTTCCGACTCATAAAGAGTGCATaGAGATGGTTTATCTCCATTCCTACTTTTTCCACA +
Preference number: 6 (lower is better)
Translates to: PLKSGFRLIKSA*RWFISIPTFST
Trigger: TGTGGAAAAAGTAGGAATGGAGATAAACCATCTGCATGCACTCTTTATGAGTCGGAACCCAGACTTCAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS GCA 72 bp ACCTCCTTTGAAGTCTGGGTTCCGACTCATAAAGAGTaGATGCAGATGGTTTATCTCCATTCCTACTTTTTC +
Preference number: 6 (lower is better)
Translates to: TSFEVWVPTHKE*MQMVYLHSYFF
Trigger: GAAAAAGTAGGAATGGAGATAAACCATCTGCATGCACTCTTTATGAGTCGGAACCCAGACTTCAAAGGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS CAA 72 bp TCCACTCTGCTTACTTTCCCGTCATCTAAAGATTTCTaGAAATGTGTCCGCAGCAATTTGAGAGAAACCACC +
Preference number: 6 (lower is better)
Translates to: STLLTFPSSKDF*KCVRSNLRETT
Trigger: GGTGGTTTCTCTCAAATTGCTGCGGACACATTTCAAGAAATCTTTAGATGACGGGAAAGTAAGCAGAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000462222.1
CDS CAA 72 bp CAACAACAAGGTCATACGACTCATCCAAAGTCAGCTTaGGCTCTTCAGGCATCTGCTTTTCCTGAAAATGTA +
Preference number: 6 (lower is better)
Translates to: QQQGHTTHPKSA*ALQASAFPENV
Trigger: TACATTTTCAGGAAAAGCAGATGCCTGAAGAGCCAAAGCTGACTTTGGATGAGTCGTATGACCTTGTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369075.8
CDS CAA 90 bp GGAAGGAACTCCACTCTGCTTACTTTCCCGTCATCTAAAGATTTCTaGAAATGTGTCCGCAGCAATTTGAGAGAAACCACCCTAAAATCA +
Preference number: 6 (lower is better)
Translates to: GRNSTLLTFPSSKDF*KCVRSNLRETTLKS
Trigger: TGATTTTAGGGTGGTTTCTCTCAAATTGCTGCGGACACATTTCAAGAAATCTTTAGATGACGGGAAAGTAAGCAGAGTGGAGTTCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000462222.1
CDS CAA 72 bp GCACGGGCAAACTCATTTAATGTCTGCCAAGCACTTTaGAGAGAGCTAATAAAACCCTGCTTCAAATCAGAT +
Preference number: 6 (lower is better)
Translates to: ARANSFNVCQAL*RELIKPCFKSD
Trigger: ATCTGATTTGAAGCAGGGTTTTATTAGCTCTCTCAAAAGTGCTTGGCAGACATTAAATGAGTTTGCCCGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000475542.1
CDS CAA 90 bp ACTTTCCCGTCATCTAAAGATTTCTTGAAATGTGTCCGCAGCAATTaGAGAGAAACCACCCTAAAATCATCCACACACTCAATAATGCTC +
Preference number: 6 (lower is better)
Translates to: TFPSSKDFLKCVRSN*RETTLKSSTHSIML
Trigger: GAGCATTATTGAGTGTGTGGATGATTTTAGGGTGGTTTCTCTCAAATTGCTGCGGACACATTTCAAGAAATCTTTAGATGACGGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369075.8
ENST00000462222.1
CDS CAA 72 bp ATTCAAAGAGTCGAACACACTAAAAGGCATCCACAGTaGTTTGTATTCTACCTCCTTGCAGTAAAACCAGTG +
Preference number: 6 (lower is better)
Translates to: IQRVEHTKRHPQ*FVFYLLAVKPV
Trigger: CACTGGTTTTACTGCAAGGAGGTAGAATACAAACAACTGTGGATGCCTTTTAGTGTGTTCGACTCTTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369075.8
ENST00000442952.1
ENST00000446561.1
CDS CAA 72 bp TCATCTAAAGATTTCTTGAAATGTGTCCGCAGCAATTaGAGAGAAACCACCCTAAAATCATCCACACACTCA +
Preference number: 6 (lower is better)
Translates to: SSKDFLKCVRSN*RETTLKSSTHS
Trigger: TGAGTGTGTGGATGATTTTAGGGTGGTTTCTCTCAAATTGCTGCGGACACATTTCAAGAAATCTTTAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369075.8
ENST00000446561.1
ENST00000462222.1
CDS TCA 72 bp CTAAATGAAGTCTTTTTCTGCCTTTGTGATGTGGAATaGGAACAGCTTTTAGGTCCAAATCTGGAACAATCA +
Preference number: 6 (lower is better)
Translates to: LNEVFFCLCDVE*EQLLGPNLEQS
Trigger: TGATTGTTCCAGATTTGGACCTAAAAGCTGTTCTCATTCCACATCACAAAGGCAGAAAAAGACTTCATTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369075.8