RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC22C (Homo sapiens)

Ensembl gene IDs: ENSG00000093183

Ensembl transcript IDs: ENST00000264454.8, ENST00000273156.11, ENST00000383750.8, ENST00000416880.5, ENST00000417572.5, ENST00000420163.1, ENST00000423701.6, ENST00000445388.5, ENST00000449617.5, ENST00000450981.5, ENST00000451653.5, ENST00000454141.5, ENST00000456222.1, ENST00000456515.5, ENST00000487701.1, ENST00000493107.5

Found 680 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGGGGCAGCTGCTATCTTCCAGCAGAGAGAGAACCCCCAGCTCTaGTCCCTACCTATGCCCTGCTTCCTGTGCCTCACACAGCCAGCC +
Preference number: 1 (lower is better)
Translates to: QGAAAIFQQRENPQL*SLPMPCFLCLTQPA
Trigger: GGCTGGCTGTGTGAGGCACAGGAAGCAGGGCATAGGTAGGGAGCAGAGCTGGGGGTTCTCTCTCTGCTGGAAGATAGCAGCTGCCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 90 bp GCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTaGCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTT +
Preference number: 1 (lower is better)
Translates to: APGWENQSSPHLGQG*LAHEVWSNQQNQLL
Trigger: AAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
3UTR GCA 90 bp CAGGCAGTGGGGCCTCTGGTACTGAGAGGGAATGCCACCCGAATATaGCCCAGCTGTCTCCACCCAGGAAAAGGAAAGCCAGGTACACTT +
Preference number: 1 (lower is better)
Translates to: QAVGPLVLRGNATRI*PSCLHPGKGKPGTL
Trigger: AAGTGTACCTGGCTTTCCTTTTCCTGGGTGGAGACAGCTGGGGCATATTCGGGTGGCATTCCCTCTCAGTACCAGAGGCCCCACTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 90 bp CCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTaGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGAT +
Preference number: 1 (lower is better)
Translates to: PDGRIRALLIWVRGG*LTRFGPTSRTSSLD
Trigger: ATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
3UTR TCA 90 bp TGCGACATAGGACTCAGTGAAGAGCCTAGCCAGCTGACGGTCAGCTaGCTGGTGCACTCTTTCCCTCACCTTCTCTCTCAAGGGCACAGC +
Preference number: 1 (lower is better)
Translates to: CDIGLSEEPSQLTVS*LVHSFPHLLSQGHS
Trigger: GCTGTGCCCTTGAGAGAGAAGGTGAGGGAAAGAGTGCACCAGTCAGCTGACCGTCAGCTGGCTAGGCTCTTCACTGAGTCCTATGTCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 90 bp TTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTaGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAGA +
Preference number: 1 (lower is better)
Translates to: LTSLLPDGRIRALLI*VRGGWLTRFGPTSR
Trigger: TCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
3UTR CCA 90 bp CAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTaGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAAAATGCAG +
Preference number: 1 (lower is better)
Translates to: QSSPHLGQGWLAHEV*SNQQNQLLGSWKMQ
Trigger: CTGCATTTTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR GCA 90 bp GCCAACTCCTTCACAGAACAGCAAATAGCAGCCCTGGCTACAAGGTaGAGTGTGCAACCCCCATATGCCAAGGGGCAGCTGCTATCTTCC +
Preference number: 1 (lower is better)
Translates to: ANSFTEQQIAALATR*SVQPPYAKGQLLSS
Trigger: GGAAGATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACACTGCACCTTGTAGCCAGGGCTGCTATTTGCTGTTCTGTGAAGGAGTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR GCA 90 bp AGCAGGCTCCAAGTGCATCGGTGTGTGACCATTCATCACCCCATTTaGCACATCTGTGTCCTCCAGAGTGAGAACCGCTGGAGGCTGCAA +
Preference number: 1 (lower is better)
Translates to: SRLQVHRCVTIHHPI*HICVLQSENRWRLQ
Trigger: TTGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTGGAGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR CCA 90 bp CAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTaGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAATAAACCA +
Preference number: 1 (lower is better)
Translates to: QSSPHLGQGWLAHEV*SNQQNQLLGSWNKP
Trigger: TGGTTTATTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 90 bp AGCCTTGCTGGCCTGCTGGCTATTGTCTCTGACTCTGAGCTGTGCTaGCCACCAAGTGTTACTCCTCTCCAAGACTTGACTCCCAGGCAT +
Preference number: 1 (lower is better)
Translates to: SLAGLLAIVSDSELC*PPSVTPLQDLTPRH
Trigger: ATGCCTGGGAGTCAAGTCTTGGAGAGGAGTAACACTTGGTGGTCAGCACAGCTCAGAGTCAGAGACAATAGCCAGCAGGCCAGCAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR GCA 90 bp CTGATCACCATAAATGCTCCCACCCCTGCCTGTCCTCACTTGTGCTaGACTATGCAAGCAAGCAGCAGGTTCTCAGAAGGCCACTGTCCT +
Preference number: 1 (lower is better)
Translates to: LITINAPTPACPHLC*TMQASSRFSEGHCP
Trigger: AGGACAGTGGCCTTCTGAGAACCTGCTGCTTGCTTGCATAGTGCAGCACAAGTGAGGACAGGCAGGGGTGGGAGCATTTATGGTGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR GCA 90 bp CAATGTCTGAACAGGGGCTTGCCAGGCACATCTGATCACCATAAATaGTCCCACCCCTGCCTGTCCTCACTTGTGCTGCACTATGCAAGC +
Preference number: 1 (lower is better)
Translates to: QCLNRGLPGTSDHHK*SHPCLSSLVLHYAS
Trigger: GCTTGCATAGTGCAGCACAAGTGAGGACAGGCAGGGGTGGGAGCATTTATGGTGATCAGATGTGCCTGGCAAGCCCCTGTTCAGACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 90 bp ATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATaGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCT +
Preference number: 1 (lower is better)
Translates to: MRFPQQQKFDITAPG*ENQSSPHLGQGWLA
Trigger: AGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
3UTR TCA 90 bp GTTACTCCTCTCCAAGACTTGACTCCCAGGCATGGGTGGGAGAGTTaGACCTCAATGCAATCTGCTCCCACTCTGAAGCTCGTCTACCCA +
Preference number: 1 (lower is better)
Translates to: VTPLQDLTPRHGWES*TSMQSAPTLKLVYP
Trigger: TGGGTAGACGAGCTTCAGAGTGGGAGCAGATTGCATTGAGGTTCAACTCTCCCACCCATGCCTGGGAGTCAAGTCTTGGAGAGGAGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 90 bp AGCAAGCAGCAGGTTCTCAGAAGGCCACTGTCCTGCATGTCACAATaGGTGGCCAACTCCTTCACAGAACAGCAAATAGCAGCCCTGGCT +
Preference number: 1 (lower is better)
Translates to: SKQQVLRRPLSCMSQ*VANSFTEQQIAALA
Trigger: AGCCAGGGCTGCTATTTGCTGTTCTGTGAAGGAGTTGGCCACTCATTGTGACATGCAGGACAGTGGCCTTCTGAGAACCTGCTGCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 90 bp GCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTaGAATAAACCAAACATCAATGGTACCATGCGCTCTGTGCCCAGG +
Preference number: 1 (lower is better)
Translates to: AHEVWSNQQNQLLGS*NKPNINGTMRSVPR
Trigger: CCTGGGCACAGAGCGCATGGTACCATTGATGTTTGGTTTATTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 90 bp TTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTaGCATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTT +
Preference number: 1 (lower is better)
Translates to: FHRLPADEISPAAEV*HHCSRMGESELSSF
Trigger: AAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
3UTR TCA 90 bp GGTTCCATTCGGAAATTAGGAGCAGGCTCCAAGTGCATCGGTGTGTaGCCATTCATCACCCCATTTGCCACATCTGTGTCCTCCAGAGTG +
Preference number: 1 (lower is better)
Translates to: GSIRKLGAGSKCIGV*PFITPFATSVSSRV
Trigger: CACTCTGGAGGACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTGGAGCCTGCTCCTAATTTCCGAATGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR GCA 90 bp GGACCGTTTCTTTACTGCCTGCTGAATATGGATCATAGGCTCAGATaGCCAAAGCACCTGGGGTACAGGTCTACATGGCAACCCAATGCC +
Preference number: 1 (lower is better)
Translates to: GPFLYCLLNMDHRLR*PKHLGYRSTWQPNA
Trigger: GGCATTGGGTTGCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCATATTCAGCAGGCAGTAAAGAAACGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 90 bp CTGACCACCAAGTGTTACTCCTCTCCAAGACTTGACTCCCAGGCATaGGTGGGAGAGTTGAACCTCAATGCAATCTGCTCCCACTCTGAA +
Preference number: 1 (lower is better)
Translates to: LTTKCYSSPRLDSQA*VGELNLNAICSHSE
Trigger: TTCAGAGTGGGAGCAGATTGCATTGAGGTTCAACTCTCCCACCCATGCCTGGGAGTCAAGTCTTGGAGAGGAGTAACACTTGGTGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR GCA 90 bp CTTGACTCCCAGGCATGGGTGGGAGAGTTGAACCTCAATGCAATCTaGTCCCACTCTGAAGCTCGTCTACCCACCCCATTTGTTACAATT +
Preference number: 1 (lower is better)
Translates to: LDSQAWVGELNLNAI*SHSEARLPTPFVTI
Trigger: AATTGTAACAAATGGGGTGGGTAGACGAGCTTCAGAGTGGGAGCAGATTGCATTGAGGTTCAACTCTCCCACCCATGCCTGGGAGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 90 bp CACACATTCGACCTGGTGTGGATAACATCTCTGGTAGTGCCTCGGTaGTCAGGAAGCATTACCAGGAAGGACTCATCTTCAAGGACCGTT +
Preference number: 1 (lower is better)
Translates to: HTFDLVWITSLVVPR*SGSITRKDSSSRTV
Trigger: AACGGTCCTTGAAGATGAGTCCTTCCTGGTAATGCTTCCTGACCACCGAGGCACTACCAGAGATGTTATCCACACCAGGTCGAATGTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 90 bp ACACATGATGTTGAGAATGAGGGAGAGGATACCCAGGGCTGTCACTaGTTCCATTCGGAAATTAGGAGCAGGCTCCAAGTGCATCGGTGT +
Preference number: 1 (lower is better)
Translates to: THDVENEGEDTQGCH*FHSEIRSRLQVHRC
Trigger: ACACCGATGCACTTGGAGCCTGCTCCTAATTTCCGAATGGAACCAGTGACAGCCCTGGGTATCCTCTCCCTCATTCTCAACATCATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR TCA 90 bp TACCAGGAAGGACTCATCTTCAAGGACCGTTTCTTTACTGCCTGCTaGATATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACA +
Preference number: 1 (lower is better)
Translates to: YQEGLIFKDRFFTAC*IWIIGSDAQSTWGT
Trigger: TGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCATATTCAGCAGGCAGTAAAGAAACGGTCCTTGAAGATGAGTCCTTCCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR GCA 90 bp GGCACAGAACCAAGGCTGGGTATCAAGCAACCTCATGACTTCCACTaGAACTGTTTAACATCCCCAATTCCTGGTTTTTCAGTCCAGTTG +
Preference number: 1 (lower is better)
Translates to: GTEPRLGIKQPHDFH*NCLTSPIPGFSVQL
Trigger: CAACTGGACTGAAAAACCAGGAATTGGGGATGTTAAACAGTTGCAGTGGAAGTCATGAGGTTGCTTGATACCCAGCCTTGGTTCTGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR GCA 90 bp GAAGCATTACCAGGAAGGACTCATCTTCAAGGACCGTTTCTTTACTaGCTGCTGAATATGGATCATAGGCTCAGATGCCCAAAGCACCTG +
Preference number: 1 (lower is better)
Translates to: EALPGRTHLQGPFLY*LLNMDHRLRCPKHL
Trigger: CAGGTGCTTTGGGCATCTGAGCCTATGATCCATATTCAGCAGGCAGTAAAGAAACGGTCCTTGAAGATGAGTCCTTCCTGGTAATGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 90 bp AGTGCTACAACAACAGTGAGTCCATGGTGGAGTGAGGATAACTCCTaGGATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGG +
Preference number: 1 (lower is better)
Translates to: SATTTVSPWWSEDNS*DLEPVCWYQGSHKR
Trigger: CCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAATCCCAGGAGTTATCCTCACTCCACCATGGACTCACTGTTGTTGTAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 90 bp TTCATGTACCAGGTGAATGTAAAGCCTTTCTCCTCCCACACACAATaGACTCACCCAGTATTACCCTCCACTACCACTTTTGACCCTCAT +
Preference number: 1 (lower is better)
Translates to: FMYQVNVKPFSSHTQ*THPVLPSTTTFDPH
Trigger: ATGAGGGTCAAAAGTGGTAGTGGAGGGTAATACTGGGTGAGTCCATTGTGTGTGGGAGGAGAAAGGCTTTACATTCACCTGGTACATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 90 bp AGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTCATaGCTTCCACTGCAACTGTTTAACATCCCCAATTCCTGGTTTTTC +
Preference number: 1 (lower is better)
Translates to: SNAWHRTKAGYQATS*LPLQLFNIPNSWFF
Trigger: GAAAAACCAGGAATTGGGGATGTTAAACAGTTGCAGTGGAAGTCATGAGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 90 bp TTCCAGACTTCTACCAAGAACAATCCAAAGAGCAAACTCCCAAAATaGCCTCCTGCGTGGTACAAAACAAGCCAGGCTGAAATTTCGGGA +
Preference number: 1 (lower is better)
Translates to: FQTSTKNNPKSKLPK*PPAWYKTSQAEISG
Trigger: TCCCGAAATTTCAGCCTGGCTTGTTTTGTACCACGCAGGAGGTCATTTTGGGAGTTTGCTCTTTGGATTGTTCTTGGTAGAAGTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 90 bp CTGTGCAATATTCTACACGAAAACATTTGGAATGTGAGCAATGTCTaGACAGGGGCTTGCCAGGCACATCTGATCACCATAAATGCTCCC +
Preference number: 1 (lower is better)
Translates to: LCNILHENIWNVSNV*TGACQAHLITINAP
Trigger: GGGAGCATTTATGGTGATCAGATGTGCCTGGCAAGCCCCTGTTCAGACATTGCTCACATTCCAAATGTTTTCGTGTAGAATATTGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 90 bp CAAACTCCCAAAATGACCTCCTGCGTGGTACAAAACAAGCCAGGCTaGAATTTCGGGAAACCTAAGGGATCTTATCCAGAACCATATTTT +
Preference number: 1 (lower is better)
Translates to: QTPKMTSCVVQNKPG*NFGKPKGSYPEPYF
Trigger: AAAATATGGTTCTGGATAAGATCCCTTAGGTTTCCCGAAATTTCAGCCTGGCTTGTTTTGTACCACGCAGGAGGTCATTTTGGGAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR GCA 90 bp ACTGAATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTaGTGCAGGTATATTGTCTCTTCAGTTCGACCTATTCCTGAGACT +
Preference number: 1 (lower is better)
Translates to: TEFCTCLALNSPVAV*CRYIVSSVRPIPET
Trigger: AGTCTCAGGAATAGGTCGAACTGAAGAGACAATATACCTGCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAATTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR TCA 90 bp CAACTGTTTAACATCCCCAATTCCTGGTTTTTCAGTCCAGTTGGCTaGAAAGGATGGAAACTGGAGTGTAAAGTAGAGAAGCAGAAAGAG +
Preference number: 1 (lower is better)
Translates to: QLFNIPNSWFFSPVG*KGWKLECKVEKQKE
Trigger: CTCTTTCTGCTTCTCTACTTTACACTCCAGTTTCCATCCTTTTCAGCCAACTGGACTGAAAAACCAGGAATTGGGGATGTTAAACAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 90 bp AGCTGTTTGCTGCAGGTATATTGTCTCTTCAGTTCGACCTATTCCTaGGACTGTCTTTCTTCCGCTTCCTTTAAAATGTCTAGTAGTCTT +
Preference number: 1 (lower is better)
Translates to: SCLLQVYCLFSSTYS*DCLSSASFKMSSSL
Trigger: AAGACTACTAGACATTTTAAAGGAAGCGGAAGAAAGACAGTCTCAGGAATAGGTCGAACTGAAGAGACAATATACCTGCAGCAAACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR TCA 90 bp CACATAATGCAGTTGAACACTCAAAGTGTTCCATGCAACTGTGGTTaGACTATTCAGATTCCAGACTTCTACCAAGAACAATCCAAAGAG +
Preference number: 1 (lower is better)
Translates to: HIMQLNTQSVPCNCG*TIQIPDFYQEQSKE
Trigger: CTCTTTGGATTGTTCTTGGTAGAAGTCTGGAATCTGAATAGTTCAACCACAGTTGCATGGAACACTTTGAGTGTTCAACTGCATTATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 90 bp AGACCACATAATGCAGTTGAACACTCAAAGTGTTCCATGCAACTGTaGTTGAACTATTCAGATTCCAGACTTCTACCAAGAACAATCCAA +
Preference number: 1 (lower is better)
Translates to: RPHNAVEHSKCSMQL*LNYSDSRLLPRTIQ
Trigger: TTGGATTGTTCTTGGTAGAAGTCTGGAATCTGAATAGTTCAACCACAGTTGCATGGAACACTTTGAGTGTTCAACTGCATTATGTGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CAA 90 bp TGCTCCCTACCTATGCCCTGCTTCCTGTGCCTCACACAGCCAGCCTaGCTGGCCTGCTGGCTATTGTCTCTGACTCTGAGCTGTGCTGAC +
Preference number: 2 (lower is better)
Translates to: CSLPMPCFLCLTQPA*LACWLLSLTLSCAD
Trigger: GTCAGCACAGCTCAGAGTCAGAGACAATAGCCAGCAGGCCAGCAAGGCTGGCTGTGTGAGGCACAGGAAGCAGGGCATAGGTAGGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR GCA 90 bp GTGCAGTGTGCAACCCCCATATGCCAAGGGGCAGCTGCTATCTTCCAGCAGAGAGTCACCAGGCTGGAGTaGAGTGGCTCGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: VQCATPICQGAAAIFQQRVTRLE*SGSISA
Trigger: AGCCGAGATCGAGCCACTGCACTCCAGCCTGGTGAC...TCTCTGCTGGAAGATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACACTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CAA 90 bp TTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTaGGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAG +
Preference number: 2 (lower is better)
Translates to: FDITAPGWENQSSPH*GQGWLAHEVWSNQQ
Trigger: CTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
3UTR CAA 90 bp TCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTaGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAAAATGCA +
Preference number: 2 (lower is better)
Translates to: SELSSFGSGVAGSRG*VQPAEPAPWILENA
Trigger: TGCATTTTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR-3UTR TCA 90 bp GTGCAGTGTGCAACCCCCATATGCCAAGGGGCAGCTGCTATCTTCCAGCAGAGAGTGCTACAACAACAGTaGGTCCATGGTGGAGTGAGG +
Preference number: 2 (lower is better)
Translates to: VQCATPICQGAAAIFQQRVLQQQ*VHGGVR
Trigger: CCTCACTCCACCATGGACTCACTGTTGTTGTAGCAC...TCTCTGCTGGAAGATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACACTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR GCA 90 bp GTGCAGTGTGCAACCCCCATATGCCAAGGGGCAGCTGCTATCTTCCAGCAGAGAGATCATAGGCTCAGATaGCCAAAGCACCTGGGGTAC +
Preference number: 2 (lower is better)
Translates to: VQCATPICQGAAAIFQQRDHRLR*PKHLGY
Trigger: GTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATC...TCTCTGCTGGAAGATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACACTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR GCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTTCCCTACCTATGCCCTaGTTCCTGTGCCTCACACAG +
Preference number: 2 (lower is better)
Translates to: PQQQKFDITAPGWENQSSSLPMP*FLCLTQ
Trigger: CTGTGTGAGGCACAGGAAGCAGGGCATAGGTAGGGA...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR GCA 90 bp AATGCAGGTAGTGTCATAGGAAGCTGTGAATTCCCACCACAGGGTCTCCAGGAAGCAGAAGGCCATGGCTaGTGGACACTGGCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: NAGSVIGSCEFPPQGLQEAEGHG*WTLAGA
Trigger: TGCTCCTGCCAGTGTCCAGCAGCCATGGCCTTCTGC...TTCCTGGAGACCCTGTGGTGGGAATTCACAGCTTCCTATGACACTACCTGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383750.8
ENST00000445388.5
ENST00000454141.5
3UTR-3UTR GCA 90 bp AGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCACTTGCTTGGCAGAAGGCCATGGCTaGTGGACACTGGCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: SHAGHVPERRKTEFCTCLAEGHG*WTLAGA
Trigger: TGCTCCTGCCAGTGTCCAGCAGCCATGGCCTTCTGC...CAAGCAAGTGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR CAA 90 bp TGTTACTCCTCTCCAAGACTTGACTCCCAGGCATGGGTGGGAGAGTaGAACCTCAATGCAATCTGCTCCCACTCTGAAGCTCGTCTACCC +
Preference number: 2 (lower is better)
Translates to: CYSSPRLDSQAWVGE*NLNAICSHSEARLP
Trigger: GGGTAGACGAGCTTCAGAGTGGGAGCAGATTGCATTGAGGTTCAACTCTCCCACCCATGCCTGGGAGTCAAGTCTTGGAGAGGAGTAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CAA 90 bp GGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTaGGATCCTGGAATAAACCAAACATCAATGGTACCATGCGCTCTG +
Preference number: 2 (lower is better)
Translates to: GGWLTRFGPTSRTSS*DPGINQTSMVPCAL
Trigger: CAGAGCGCATGGTACCATTGATGTTTGGTTTATTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR TCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTTCCTGCATGTCACAATaGGTGGCCAACTCCTTCACA +
Preference number: 2 (lower is better)
Translates to: PQQQKFDITAPGWENQSSSCMSQ*VANSFT
Trigger: TGTGAAGGAGTTGGCCACTCATTGTGACATGCAGGA...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CCA 90 bp AGGCTCCAAGTGCATCGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTATGGCTGCTGGACACTaGCAGGAGCAGATAGCCATG +
Preference number: 2 (lower is better)
Translates to: RLQVHRCVTIHHPICHICMAAGH*QEQIAM
Trigger: CATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCCAT...ACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383750.8
3UTR-3UTR TCA 90 bp GTGCAGTGTGCAACCCCCATATGCCAAGGGGCAGCTGCTATCTTCCAGCAGAGACCATGCAACTGTGGTTaGACTATTCAGATTCCAGAC +
Preference number: 2 (lower is better)
Translates to: VQCATPICQGAAAIFQQRPCNCG*TIQIPD
Trigger: GTCTGGAATCTGAATAGTTCAACCACAGTTGCATGG...TCTCTGCTGGAAGATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACACTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR TCA 90 bp GCCAATGCAGGTAGTGTCATAGGAAGCTGTGAATTCCCACCACAGGGTCTCCAGTGTCATAGGAAGCTGTaGATTCCCACCACAGGGTCT +
Preference number: 2 (lower is better)
Translates to: ANAGSVIGSCEFPPQGLQCHRKL*IPTTGS
Trigger: AGACCCTGTGGTGGGAATTCACAGCTTCCTATGACA...CTGGAGACCCTGTGGTGGGAATTCACAGCTTCCTATGACACTACCTGCATTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383750.8
ENST00000445388.5
ENST00000454141.5
3UTR-3UTR TCA 90 bp CTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCATGCCACTTCACTTTCTaGATGATGCTGTCAAACTCA +
Preference number: 2 (lower is better)
Translates to: LSSFGSGVAGSRGLVQPACHFTF*MMLSNS
Trigger: TGAGTTTGACAGCATCATTCAGAAAGTGAAGTGGCA...TGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR-3UTR GCA 90 bp GCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAACCTCATGACTTCCACTaGAACTGTTTAACATCCCCA +
Preference number: 2 (lower is better)
Translates to: AGSRGLVQPAEPAPWILEPHDFH*NCLTSP
Trigger: TGGGGATGTTAAACAGTTGCAGTGGAAGTCATGAGG...TTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR GCA 90 bp GTGCAGTGTGCAACCCCCATATGCCAAGGGGCAGCTGCTATCTTCCAGCAGAGAAGGCACAAGCCACCGTaGCCAGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: VQCATPICQGAAAIFQQRRHKPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCACGGTGGCTTGTGCCT...TCTCTGCTGGAAGATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACACTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CCA 90 bp GATAGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCACTTGCATGGCTGCTGGACACTaGCAGGAGCAGATAGCCATG +
Preference number: 2 (lower is better)
Translates to: DSHAGHVPERRKTEFCTCMAAGH*QEQIAM
Trigger: CATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCCAT...GCAAGTGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR-3UTR CCA 90 bp GAGCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCAATGGCTGCTGGACACTaGCAGGAGCAGATAGCCATG +
Preference number: 2 (lower is better)
Translates to: EQIAMQATSPKEEKLNSAMAAGH*QEQIAM
Trigger: CATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCCAT...TGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGCTATCTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR-3UTR GCA 90 bp TGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAAAAATTCATCACCCCATTTaGCACATCTGTGTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: WLTRFGPTSRTSSLDPGKIHHPI*HICVLQ
Trigger: CTGGAGGACACAGATGTGGCAAATGGGGTGATGAAT...TTTTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR-3UTR CCA 90 bp GGACTCACCCAGTATTACCCTCCACTACCACTTTTGACCCTCATAACAGCACCCGCACAGAACCAAGGCTaGGTATCAAGCAACCTCATG +
Preference number: 2 (lower is better)
Translates to: GLTQYYPPLPLLTLITAPAQNQG*VSSNLM
Trigger: CATGAGGTTGCTTGATACCCAGCCTTGGTTCTGTGC...GGGTGCTGTTATGAGGGTCAAAAGTGGTAGTGGAGGGTAATACTGGGTGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CCA 90 bp GGACTCACCCAGTATTACCCTCCACTACCACTTTTGACCCTCATAACAGCACCCAAAAGCAGGAGCTTATaGTCACATGCCTCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: GLTQYYPPLPLLTLITAPKSRSL*SHASSC
Trigger: GCAGCTGGAGGCATGTGACCATAAGCTCCTGCTTTT...GGGTGCTGTTATGAGGGTCAAAAGTGGTAGTGGAGGGTAATACTGGGTGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CCA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCCAGCTCCTTGGATCCTaGAAAATGCAGGCTACGAAA +
Preference number: 2 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLQLLGS*KMQATK
Trigger: TTTCGTAGCCTGCATTTTCCAGGATCCAAGGAGCTG...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR-3UTR TCA 90 bp CTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATTAAAGCTCTTTCTGGATaGGCCCCCAGATCCAGCTGT +
Preference number: 2 (lower is better)
Translates to: LCHQYTWADVSESSHSQIKALSG*APRSSC
Trigger: ACAGCTGGATCTGGGGGCTCATCCAGAAAGAGCTTT...AATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR TCA 90 bp AATGCAGGTAGTGTCATAGGAAGCTGTGAATTCCCACCACAGGGTCTCCAGGAATGTCATAGGAAGCTGTaGATTCCCACCACAGGGTCT +
Preference number: 2 (lower is better)
Translates to: NAGSVIGSCEFPPQGLQECHRKL*IPTTGS
Trigger: AGACCCTGTGGTGGGAATTCACAGCTTCCTATGACA...TTCCTGGAGACCCTGTGGTGGGAATTCACAGCTTCCTATGACACTACCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383750.8
ENST00000445388.5
ENST00000454141.5
3UTR-3UTR GCA 90 bp ATATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCTTTGGCCTTCCAAAGTaGTGGGAATACAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: IWIIGSDAQSTWGTGLHGFGLPK*WEYRHE
Trigger: CTCATGCCTGTATTCCCAGCACTTTGGAAGGCCAAA...GCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR GCA 90 bp ATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCAATTTGGCCTTCCAAAGTaGTGGGAATACAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: MDHRLRCPKHLGYRSTWQFGLPK*WEYRHE
Trigger: CTCATGCCTGTATTCCCAGCACTTTGGAAGGCCAAA...TTGCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR GCA 90 bp ATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGCTGCAGGTATATGCAGAAGGCCATGGCTaGTGGACACTGGCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: ILHLLGFKQSCSCLLQVYAEGHG*WTLAGA
Trigger: TGCTCCTGCCAGTGTCCAGCAGCCATGGCCTTCTGC...ATATACCTGCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR-3UTR CCA 90 bp TGGACACTGGCAGGAGCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAGAAAATTTGAAGCCAGTTTGTaGTCATTTGTTATGGCAGCC +
Preference number: 2 (lower is better)
Translates to: WTLAGADSHAGHVPERRKFEASL*SFVMAA
Trigger: GGCTGCCATAACAAATGACCACAAACTGGCTTCAAA...TTTTCTTCTTTCGGGGACGTGGCCTGCATGGCTATCTGCTCCTGCCAGTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454141.5
3UTR-3UTR TCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTGGAGACAACTCTCAATaGCTAAAACCAGTGTTATTG +
Preference number: 2 (lower is better)
Translates to: PQQQKFDITAPGWENQSSGDNSQ*LKPVLL
Trigger: CAATAACACTGGTTTTAGTCATTGAGAGTTGTCTCC...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR TCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCATGTAGATGTTAACTaGTATCCACACATTCGACCT +
Preference number: 2 (lower is better)
Translates to: PQQQKFDITAPGWENQSSHVDVN*YPHIRP
Trigger: AGGTCGAATGTGTGGATATCAGTTAACATCTACATG...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR TCA 90 bp GCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCACTAGTTCGACCTATTCCTaGGACTGTCTTTCTTCCGCT +
Preference number: 2 (lower is better)
Translates to: ADSHAGHVPERRKTEFCTSSTYS*DCLSSA
Trigger: AGCGGAAGAAAGACAGTCTCAGGAATAGGTCGAACT...AGTGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGCTATCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR-3UTR TCA 90 bp AGGCTCCAAGTGCATCGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTGAATGTTCTGCAAGGTaGACTCCTCGAATGAGATTC +
Preference number: 2 (lower is better)
Translates to: RLQVHRCVTIHHPICHICECSAR*TPRMRF
Trigger: GAATCTCATTCGAGGAGTTCACCTTGCAGAACATTC...ACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTGGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR-3UTR GCA 90 bp AGAACCAGCTCCTTGGATCCTGGAATAAACCAAACATCAATGGTACCATGCGCTGATCATAGGCTCAGATaGCCAAAGCACCTGGGGTAC +
Preference number: 2 (lower is better)
Translates to: RTSSLDPGINQTSMVPCADHRLR*PKHLGY
Trigger: GTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATC...AGCGCATGGTACCATTGATGTTTGGTTTATTCCAGGATCCAAGGAGCTGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR GCA 90 bp GGCCAACTCCTTCACAGAACAGCAAATAGCAGCCCTGGCTACAAGGTGCAGTGTGGACCGTTTCTTTACTaGCTGCTGAATATGGATCAT +
Preference number: 2 (lower is better)
Translates to: GQLLHRTANSSPGYKVQCGPFLY*LLNMDH
Trigger: ATGATCCATATTCAGCAGGCAGTAAAGAAACGGTCC...ACACTGCACCTTGTAGCCAGGGCTGCTATTTGCTGTTCTGTGAAGGAGTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CCA 90 bp GGCCAACTCCTTCACAGAACAGCAAATAGCAGCCCTGGCTACAAGGTGCAGTGTATAACTCCTGGGATTTaGAACCAGTTTGCTGGTATC +
Preference number: 2 (lower is better)
Translates to: GQLLHRTANSSPGYKVQCITPGI*NQFAGI
Trigger: GATACCAGCAAACTGGTTCCAAATCCCAGGAGTTAT...ACACTGCACCTTGTAGCCAGGGCTGCTATTTGCTGTTCTGTGAAGGAGTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR TCA 90 bp ATATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCTCTGTAAAGTGCCACTaGATCCATGTTCATTCACCT +
Preference number: 2 (lower is better)
Translates to: IWIIGSDAQSTWGTGLHGSVKCH*IHVHSP
Trigger: AGGTGAATGAACATGGATTCAGTGGCACTTTACAGA...GCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR TCA 90 bp GGACTCACCCAGTATTACCCTCCACTACCACTTTTGACCCTCATAACAGCACCCTTCTTTACTGCCTGCTaGATATGGATCATAGGCTCA +
Preference number: 2 (lower is better)
Translates to: GLTQYYPPLPLLTLITAPFFTAC*IWIIGS
Trigger: TGAGCCTATGATCCATATTCAGCAGGCAGTAAAGAA...GGGTGCTGTTATGAGGGTCAAAAGTGGTAGTGGAGGGTAATACTGGGTGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR TCA 90 bp AGGCTCCAAGTGCATCGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTTGCCACTTCACTTTCTaGATGATGCTGTCAAACTCA +
Preference number: 2 (lower is better)
Translates to: RLQVHRCVTIHHPICHICCHFTF*MMLSNS
Trigger: TGAGTTTGACAGCATCATTCAGAAAGTGAAGTGGCA...ACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTGGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
3UTR-3UTR CCA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCACTGGTAGTGCCTCGGTaGTCAGGAAGCATTACCAGG +
Preference number: 2 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPLVVPR*SGSITR
Trigger: CCTGGTAATGCTTCCTGACCACCGAGGCACTACCAG...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CCA 90 bp AGAACCAGCTCCTTGGATCCTGGAATAAACCAAACATCAATGGTACCATGCGCTAAAAGCAGGAGCTTATaGTCACATGCCTCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: RTSSLDPGINQTSMVPCAKSRSL*SHASSC
Trigger: GCAGCTGGAGGCATGTGACCATAAGCTCCTGCTTTT...AGCGCATGGTACCATTGATGTTTGGTTTATTCCAGGATCCAAGGAGCTGGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CCA 90 bp ATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGCTGCAGGTATATGAAAAGCGTATGGCCTaGAGGCTAGGCCAATGCAGG +
Preference number: 2 (lower is better)
Translates to: ILHLLGFKQSCSCLLQVYEKRMA*RLGQCR
Trigger: CCTGCATTGGCCTAGCCTCCAGGCCATACGCTTTTC...ATATACCTGCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445388.5
3UTR CAA 90 bp TCAATGCAATCTGCTCCCACTCTGAAGCTCGTCTACCCACCCCATTaGTTACAATTAAAGATGGTTTTCTCATCCCTCCAGAGACTCCAG +
Preference number: 2 (lower is better)
Translates to: SMQSAPTLKLVYPPH*LQLKMVFSSLQRLQ
Trigger: CTGGAGTCTCTGGAGGGATGAGAAAACCATCTTTAATTGTAACAAATGGGGTGGGTAGACGAGCTTCAGAGTGGGAGCAGATTGCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR GCA 90 bp GGACTCACCCAGTATTACCCTCCACTACCACTTTTGACCCTCATAACAGCACCCTACATGGCAACCCAATaGCACATAGGAAAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: GLTQYYPPLPLLTLITAPYMATQ*HIGKEN
Trigger: GTTTTCTTTTCCTATGTGGCATTGGGTTGCCATGTA...GGGTGCTGTTATGAGGGTCAAAAGTGGTAGTGGAGGGTAATACTGGGTGAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR GCA 90 bp AGAACCAGCTCCTTGGATCCTGGAATAAACCAAACATCAATGGTACCATGCGCTAACCTCAATGCAATCTaGTCCCACTCTGAAGCTCGT +
Preference number: 2 (lower is better)
Translates to: RTSSLDPGINQTSMVPCANLNAI*SHSEAR
Trigger: ACGAGCTTCAGAGTGGGAGCAGATTGCATTGAGGTT...AGCGCATGGTACCATTGATGTTTGGTTTATTCCAGGATCCAAGGAGCTGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CCA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCACAGGCTGGGGTGCAGTaGTGTGATTATAGCTCATGG +
Preference number: 2 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPQAGVQ*CDYSSW
Trigger: CCATGAGCTATAATCACACCACTGCACCCCAGCCTG...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR TCA 90 bp AGTGCATCGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTGTCCTCCAACTTCACTTTCTGAATaGTGCTGTCAAACTCAAGAA +
Preference number: 2 (lower is better)
Translates to: SASVCDHSSPHLPHLCPPTSLSE*CCQTQE
Trigger: TTCTTGAGTTTGACAGCATCATTCAGAAAGTGAAGT...TGGAGGACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
3UTR-3UTR TCA 90 bp AATGCAGGTAGTGTCATAGGAAGCTGTGAATTCCCACCACAGGGTCTCCAGGAAACGAATTCTGTTGTTTaGAGCCAGTTTGTGGTCATT +
Preference number: 2 (lower is better)
Translates to: NAGSVIGSCEFPPQGLQETNSVV*SQFVVI
Trigger: AATGACCACAAACTGGCTTCAAACAACAGAATTCGT...TTCCTGGAGACCCTGTGGTGGGAATTCACAGCTTCCTATGACACTACCTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454141.5
3UTR-3UTR GCA 90 bp GCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCACTTTCATGCATGAGGGATaGATATTCTATTGGGGGAAT +
Preference number: 2 (lower is better)
Translates to: ADSHAGHVPERRKTEFCTFMHEG*IFYWGN
Trigger: ATTCCCCCAATAGAATATGCATCCCTCATGCATGAA...AGTGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGCTATCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR-3UTR CCA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGATTTTAAAGTaGTTCCTTGGAGACAACTCT +
Preference number: 2 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLIWILK*FLGDNS
Trigger: AGAGTTGTCTCCAAGGAACCACTTTAAAATCCAAAT...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR GCA 90 bp GATAGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCACTTGCAGAAAAACTGAATTCTaGACTTGCTTGGCTTTAAAC +
Preference number: 2 (lower is better)
Translates to: DSHAGHVPERRKTEFCTCRKTEF*TCLALN
Trigger: GTTTAAAGCCAAGCAAGTGCAGAATTCAGTTTTTCT...GCAAGTGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGCTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR-3UTR CCA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTCCTGCAGTAATGCTTaGCACAGAACCAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMSCSNA*HRTKAG
Trigger: CCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGA...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CCA 90 bp CTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATTTTTCCAATTTCCTCATaGGCAACCTGTAAAGAATGT +
Preference number: 2 (lower is better)
Translates to: LCHQYTWADVSESSHSQIFPISS*ATCKEC
Trigger: ACATTCTTTACAGGTTGCCCATGAGGAAATTGGAAA...AATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR-3UTR TCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACTTCAGTCCAGTTGGCTaGAAAGGATGGAAACTGGAG +
Preference number: 2 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYFSPVG*KGWKLE
Trigger: CTCCAGTTTCCATCCTTTTCAGCCAACTGGACTGAA...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR TCA 90 bp ATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGCTGCAGGTATATAGTAGTCTTAATCAATaGCAGCCTGTGATCACTCTT +
Preference number: 2 (lower is better)
Translates to: ILHLLGFKQSCSCLLQVYSSLNQ*QPVITL
Trigger: AAGAGTGATCACAGGCTGTCATTGATTAAGACTACT...ATATACCTGCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR CAA 90 bp CCACATAATGCAGTTGAACACTCAAAGTGTTCCATGCAACTGTGGTaGAACTATTCAGATTCCAGACTTCTACCAAGAACAATCCAAAGA +
Preference number: 2 (lower is better)
Translates to: PHNAVEHSKCSMQLW*NYSDSRLLPRTIQR
Trigger: TCTTTGGATTGTTCTTGGTAGAAGTCTGGAATCTGAATAGTTCAACCACAGTTGCATGGAACACTTTGAGTGTTCAACTGCATTATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR TCA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGACTTCACTTTCTGAATaGTGCTGTCAAACTCAAGAA +
Preference number: 2 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMTSLSE*CCQTQE
Trigger: TTCTTGAGTTTGACAGCATCATTCAGAAAGTGAAGT...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR-3UTR CCA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATTTTAAAGTGGTTCCTTaGAGACAACTCTCAATGACT +
Preference number: 2 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHFKVVP*RQLSMT
Trigger: AGTCATTGAGAGTTGTCTCCAAGGAACCACTTTAAA...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 72 bp CCACAGGGTCTCCAGGAAGCAGAAGGCCATGGCTGCTaGACACTGGCAGGAGCAGATAGCCATGCAGGCCAC +
Preference number: 3 (lower is better)
Translates to: PQGLQEAEGHGC*TLAGADSHAGH
Trigger: GTGGCCTGCATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCCATGGCCTTCTGCTTCCTGGAGACCCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383750.8
ENST00000445388.5
ENST00000454141.5
3UTR CCA 72 bp CCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTaGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGG +
Preference number: 3 (lower is better)
Translates to: PHLGQGWLAHEV*SNQQNQLLGSW
Trigger: CCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
3UTR CCA 72 bp CTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTaGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCA +
Preference number: 3 (lower is better)
Translates to: LLPDGRIRALLI*VRGGWLTRFGP
Trigger: TGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
3UTR GCA 72 bp GGGCCTCTGGTACTGAGAGGGAATGCCACCCGAATATaGCCCAGCTGTCTCCACCCAGGAAAAGGAAAGCCA +
Preference number: 3 (lower is better)
Translates to: GPLVLRGNATRI*PSCLHPGKGKP
Trigger: TGGCTTTCCTTTTCCTGGGTGGAGACAGCTGGGGCATATTCGGGTGGCATTCCCTCTCAGTACCAGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR GCA 72 bp TGCTTCCTGTGCCTCACACAGCCAGCCTTGCTGGCCTaGTGGCTATTGTCTCTGACTCTGAGCTGTGCTGAC +
Preference number: 3 (lower is better)
Translates to: CFLCLTQPALLA*WLLSLTLSCAD
Trigger: GTCAGCACAGCTCAGAGTCAGAGACAATAGCCAGCAGGCCAGCAAGGCTGGCTGTGTGAGGCACAGGAAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR GCA 72 bp GCTGCTATCTTCCAGCAGAGAGAGAACCCCCAGCTCTaGTCCCTACCTATGCCCTGCTTCCTGTGCCTCACA +
Preference number: 3 (lower is better)
Translates to: AAIFQQRENPQL*SLPMPCFLCLT
Trigger: TGTGAGGCACAGGAAGCAGGGCATAGGTAGGGAGCAGAGCTGGGGGTTCTCTCTCTGCTGGAAGATAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR GCA 72 bp AGCCCTGGCTACAAGGTGCAGTGTGCAACCCCCATATaGCAAGGGGCAGCTGCTATCTTCCAGCAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: SPGYKVQCATPI*QGAAAIFQQRE
Trigger: CTCTCTCTGCTGGAAGATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACACTGCACCTTGTAGCCAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 72 bp AGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTaGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGC +
Preference number: 3 (lower is better)
Translates to: RIRALLIWVRGG*LTRFGPTSRTS
Trigger: GCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
3UTR CCA 72 bp TGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTaGCTGGCTCACGAGGTTTGGTCCAACCAGCAGAAC +
Preference number: 3 (lower is better)
Translates to: WENQSSPHLGQG*LAHEVWSNQQN
Trigger: GTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
3UTR GCA 72 bp TTCACAGAACAGCAAATAGCAGCCCTGGCTACAAGGTaGAGTGTGCAACCCCCATATGCCAAGGGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: FTEQQIAALATR*SVQPPYAKGQL
Trigger: CAGCTGCCCCTTGGCATATGGGGGTTGCACACTGCACCTTGTAGCCAGGGCTGCTATTTGCTGTTCTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CAA 90 bp ATATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCACCGAGTCTCCTGCTTaGGCCTTCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: IWIIGSDAQSTWGTGLHGTESPA*AFQSAG
Trigger: CCCAGCACTTTGGAAGGCCAAAGCAGGAGACTCGGT...GCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 72 bp CTCCAAGACTTGACTCCCAGGCATGGGTGGGAGAGTTaGACCTCAATGCAATCTGCTCCCACTCTGAAGCTC +
Preference number: 3 (lower is better)
Translates to: LQDLTPRHGWES*TSMQSAPTLKL
Trigger: GAGCTTCAGAGTGGGAGCAGATTGCATTGAGGTTCAACTCTCCCACCCATGCCTGGGAGTCAAGTCTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 72 bp CTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTaGCATCACTGCTCCCGGATGGGAGAATCAGAGCTC +
Preference number: 3 (lower is better)
Translates to: LPADEISPAAEV*HHCSRMGESEL
Trigger: GAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
3UTR GCA 72 bp CAAGTGCATCGGTGTGTGACCATTCATCACCCCATTTaGCACATCTGTGTCCTCCAGAGTGAGAACCGCTGG +
Preference number: 3 (lower is better)
Translates to: QVHRCVTIHHPI*HICVLQSENRW
Trigger: CCAGCGGTTCTCACTCTGGAGGACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
3UTR TCA 72 bp CAGCAGCCCCTCCCAAGCGGATCTGTAAAGTGCCACTaGATCCATGTTCATTCACCTACTCCAGGTTGTGGT +
Preference number: 3 (lower is better)
Translates to: QQPLPSGSVKCH*IHVHSPTPGCG
Trigger: ACCACAACCTGGAGTAGGTGAATGAACATGGATTCAGTGGCACTTTACAGATCCGCTTGGGAGGGGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 72 bp TGTGCTGACCACCAAGTGTTACTCCTCTCCAAGACTTaGCTCCCAGGCATGGGTGGGAGAGTTGAACCTCAA +
Preference number: 3 (lower is better)
Translates to: CADHQVLLLSKT*LPGMGGRVEPQ
Trigger: TTGAGGTTCAACTCTCCCACCCATGCCTGGGAGTCAAGTCTTGGAGAGGAGTAACACTTGGTGGTCAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 72 bp GGCCTGCTGGCTATTGTCTCTGACTCTGAGCTGTGCTaGCCACCAAGTGTTACTCCTCTCCAAGACTTGACT +
Preference number: 3 (lower is better)
Translates to: GLLAIVSDSELC*PPSVTPLQDLT
Trigger: AGTCAAGTCTTGGAGAGGAGTAACACTTGGTGGTCAGCACAGCTCAGAGTCAGAGACAATAGCCAGCAGGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 72 bp CGGAAATTAGGAGCAGGCTCCAAGTGCATCGGTGTGTaGCCATTCATCACCCCATTTGCCACATCTGTGTCC +
Preference number: 3 (lower is better)
Translates to: RKLGAGSKCIGV*PFITPFATSVS
Trigger: GGACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTGGAGCCTGCTCCTAATTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR CCA 72 bp GTTGAGAATGAGGGAGAGGATACCCAGGGCTGTCACTaGTTCCATTCGGAAATTAGGAGCAGGCTCCAAGTG +
Preference number: 3 (lower is better)
Translates to: VENEGEDTQGCH*FHSEIRSRLQV
Trigger: CACTTGGAGCCTGCTCCTAATTTCCGAATGGAACCAGTGACAGCCCTGGGTATCCTCTCCCTCATTCTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR-3UTR CAA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTAGCAGAACCAGCTCCTaGGATCCTGGAATAAACCAA +
Preference number: 3 (lower is better)
Translates to: PQQQKFDITAPGWENQSSSRTSS*DPGINQ
Trigger: TTGGTTTATTCCAGGATCCAAGGAGCTGGTTCTGCT...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 72 bp GACCTGGTGTGGATAACATCTCTGGTAGTGCCTCGGTaGTCAGGAAGCATTACCAGGAAGGACTCATCTTCA +
Preference number: 3 (lower is better)
Translates to: DLVWITSLVVPR*SGSITRKDSSS
Trigger: TGAAGATGAGTCCTTCCTGGTAATGCTTCCTGACCACCGAGGCACTACCAGAGATGTTATCCACACCAGGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 72 bp AAGTGTTACTCCTCTCCAAGACTTGACTCCCAGGCATaGGTGGGAGAGTTGAACCTCAATGCAATCTGCTCC +
Preference number: 3 (lower is better)
Translates to: KCYSSPRLDSQA*VGELNLNAICS
Trigger: GGAGCAGATTGCATTGAGGTTCAACTCTCCCACCCATGCCTGGGAGTCAAGTCTTGGAGAGGAGTAACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR GCA 72 bp CTTTACTGCCTGCTGAATATGGATCATAGGCTCAGATaGCCAAAGCACCTGGGGTACAGGTCTACATGGCAA +
Preference number: 3 (lower is better)
Translates to: LYCLLNMDHRLR*PKHLGYRSTWQ
Trigger: TTGCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCATATTCAGCAGGCAGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CAA 90 bp GCCAATGCAGGTAGTGTCATAGGAAGCTGTGAATTCCCACCACAGGGTCTCCAGTTTGCTGCAGGTATATaGTCTCTTCAGTTCGACCTA +
Preference number: 3 (lower is better)
Translates to: ANAGSVIGSCEFPPQGLQFAAGI*SLQFDL
Trigger: TAGGTCGAACTGAAGAGACAATATACCTGCAGCAAA...CTGGAGACCCTGTGGTGGGAATTCACAGCTTCCTATGACACTACCTGCATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR TCA 72 bp GGACTCATCTTCAAGGACCGTTTCTTTACTGCCTGCTaGATATGGATCATAGGCTCAGATGCCCAAAGCACC +
Preference number: 3 (lower is better)
Translates to: GLIFKDRFFTAC*IWIIGSDAQST
Trigger: GGTGCTTTGGGCATCTGAGCCTATGATCCATATTCAGCAGGCAGTAAAGAAACGGTCCTTGAAGATGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 72 bp TCAAGGATCACACAAGAGGCTATAAACCTCCAACCCTaGACCAAGTCAAACCTAAGCCTGGGGATTTCCCTC +
Preference number: 3 (lower is better)
Translates to: SRITQEAINLQP*TKSNLSLGISL
Trigger: GAGGGAAATCCCCAGGCTTAGGTTTGACTTGGTTCAGGGTTGGAGGTTTATAGCCTCTTGTGTGATCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 72 bp TCCTCATGGGCAACCTGTAAAGAATGTTCTGCAAGGTaGACTCCTCGAATGAGATTCAGGGCAGCACACATG +
Preference number: 3 (lower is better)
Translates to: SSWATCKECSAR*TPRMRFRAAHM
Trigger: CATGTGTGCTGCCCTGAATCTCATTCGAGGAGTTCACCTTGCAGAACATTCTTTACAGGTTGCCCATGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR GCA 72 bp CCAGGAAGGACTCATCTTCAAGGACCGTTTCTTTACTaGCTGCTGAATATGGATCATAGGCTCAGATGCCCA +
Preference number: 3 (lower is better)
Translates to: PGRTHLQGPFLY*LLNMDHRLRCP
Trigger: TGGGCATCTGAGCCTATGATCCATATTCAGCAGGCAGTAAAGAAACGGTCCTTGAAGATGAGTCCTTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 72 bp GTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTaGAATAAACCAAACATCAATGGTACCATGCGCTCT +
Preference number: 3 (lower is better)
Translates to: VWSNQQNQLLGS*NKPNINGTMRS
Trigger: AGAGCGCATGGTACCATTGATGTTTGGTTTATTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CAA 90 bp GGACTCACCCAGTATTACCCTCCACTACCACTTTTGACCCTCATAACAGCACCCTTCACCTACTCCAGGTaGTGGTCAATTGTAAGTAAT +
Preference number: 3 (lower is better)
Translates to: GLTQYYPPLPLLTLITAPFTYSR*WSIVSN
Trigger: ATTACTTACAATTGACCACAACCTGGAGTAGGTGAA...GGGTGCTGTTATGAGGGTCAAAAGTGGTAGTGGAGGGTAATACTGGGTGAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CCA 72 bp ACAACAGTGAGTCCATGGTGGAGTGAGGATAACTCCTaGGATTTGGAACCAGTTTGCTGGTATCAAGGATCA +
Preference number: 3 (lower is better)
Translates to: TTVSPWWSEDNS*DLEPVCWYQGS
Trigger: TGATCCTTGATACCAGCAAACTGGTTCCAAATCCCAGGAGTTATCCTCACTCCACCATGGACTCACTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 72 bp TCTACCAAGAACAATCCAAAGAGCAAACTCCCAAAATaGCCTCCTGCGTGGTACAAAACAAGCCAGGCTGAA +
Preference number: 3 (lower is better)
Translates to: STKNNPKSKLPK*PPAWYKTSQAE
Trigger: TTCAGCCTGGCTTGTTTTGTACCACGCAGGAGGTCATTTTGGGAGTTTGCTCTTTGGATTGTTCTTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR GCA 72 bp CCAAGGCTGGGTATCAAGCAACCTCATGACTTCCACTaGAACTGTTTAACATCCCCAATTCCTGGTTTTTCA +
Preference number: 3 (lower is better)
Translates to: PRLGIKQPHDFH*NCLTSPIPGFS
Trigger: TGAAAAACCAGGAATTGGGGATGTTAAACAGTTGCAGTGGAAGTCATGAGGTTGCTTGATACCCAGCCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CAA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGAGACTGAAAGCTGATTaGGATTTTAAAGTGGTTCCT +
Preference number: 3 (lower is better)
Translates to: QKFDITAPGWENQSSPHLRLKAD*DFKVVP
Trigger: AGGAACCACTTTAAAATCCAAATCAGCTTTCAGTCT...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CAA 90 bp TGCTGCAGGTATATTGTCTCTTCAGTTCGACCTATTCCTGAGACTGTCTTTCTTGGGATGCATATTCTATaGGGGGAATTAGCCTCAGAC +
Preference number: 3 (lower is better)
Translates to: CCRYIVSSVRPIPETVFLGMHIL*GELASD
Trigger: GTCTGAGGCTAATTCCCCCAATAGAATATGCATCCC...AAGAAAGACAGTCTCAGGAATAGGTCGAACTGAAGAGACAATATACCTGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR-3UTR CAA 90 bp AAAACTGAATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGCTGCCAGTCCTGTAGCTGTTaGCTGCAGGTATATTGTCTC +
Preference number: 3 (lower is better)
Translates to: KTEFCTCLALNSPVAVCCQSCSC*LQVYCL
Trigger: GAGACAATATACCTGCAGCAAACAGCTACAGGACTG...GCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAATTCAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR TCA 72 bp AAAATGACCTCCTGCGTGGTACAAAACAAGCCAGGCTaGAATTTCGGGAAACCTAAGGGATCTTATCCAGAA +
Preference number: 3 (lower is better)
Translates to: KMTSCVVQNKPG*NFGKPKGSYPE
Trigger: TTCTGGATAAGATCCCTTAGGTTTCCCGAAATTTCAGCCTGGCTTGTTTTGTACCACGCAGGAGGTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 72 bp ATTCTACACGAAAACATTTGGAATGTGAGCAATGTCTaGACAGGGGCTTGCCAGGCACATCTGATCACCATA +
Preference number: 3 (lower is better)
Translates to: ILHENIWNVSNV*TGACQAHLITI
Trigger: TATGGTGATCAGATGTGCCTGGCAAGCCCCTGTTCAGACATTGCTCACATTCCAAATGTTTTCGTGTAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR TCA 72 bp TTAACTACTGGGAAAACAAAAGTGCTACAACAACAGTaGGTCCATGGTGGAGTGAGGATAACTCCTGGGATT +
Preference number: 3 (lower is better)
Translates to: LTTGKTKVLQQQ*VHGGVRITPGI
Trigger: AATCCCAGGAGTTATCCTCACTCCACCATGGACTCACTGTTGTTGTAGCACTTTTGTTTTCCCAGTAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CAA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCAGACCACATAATGCAGTaGAACACTCAAAGTGTTCCA +
Preference number: 3 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPDHIMQ*NTQSVP
Trigger: TGGAACACTTTGAGTGTTCAACTGCATTATGTGGTC...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CAA 90 bp AAAACTGAATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGCTGCGAATTCTGCACTTGCTaGGCTTTAAACAGTCCTGTA +
Preference number: 3 (lower is better)
Translates to: KTEFCTCLALNSPVAVCCEFCTC*ALNSPV
Trigger: TACAGGACTGTTTAAAGCCAAGCAAGTGCAGAATTC...GCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAATTCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR-3UTR CAA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATAGCAGAACCAGCTCCTaGGATCCTGGAAAATGCAGG +
Preference number: 3 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHSRTSS*DPGKCR
Trigger: CCTGCATTTTCCAGGATCCAAGGAGCTGGTTCTGCT...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR TCA 72 bp TTGCAAAAGTCAATCTCACCCCATGTAGATGTTAACTaGTATCCACACATTCGACCTGGTGTGGATAACATC +
Preference number: 3 (lower is better)
Translates to: LQKSISPHVDVN*YPHIRPGVDNI
Trigger: GATGTTATCCACACCAGGTCGAATGTGTGGATATCAGTTAACATCTACATGGGGTGAGATTGACTTTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CAA 90 bp ATCACTCTTATTTATTCATGCATGAGGGATGCATATTCTATTGGGGGAATTAGCGGGATGCATATTCTATaGGGGGAATTAGCCTCAGAC +
Preference number: 3 (lower is better)
Translates to: ITLIYSCMRDAYSIGGISGMHIL*GELASD
Trigger: GTCTGAGGCTAATTCCCCCAATAGAATATGCATCCC...GCTAATTCCCCCAATAGAATATGCATCCCTCATGCATGAATAAATAAGAGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
3UTR TCA 72 bp CAGTTGAACACTCAAAGTGTTCCATGCAACTGTGGTTaGACTATTCAGATTCCAGACTTCTACCAAGAACAA +
Preference number: 3 (lower is better)
Translates to: QLNTQSVPCNCG*TIQIPDFYQEQ
Trigger: TTGTTCTTGGTAGAAGTCTGGAATCTGAATAGTTCAACCACAGTTGCATGGAACACTTTGAGTGTTCAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR-3UTR CAA 90 bp ATCACTCTTATTTATTCATGCATGAGGGATGCATATTCTATTGGGGGAATTAGCAACGAATTCTGTTGTTaGAAGCCAGTTTGTGGTCAT +
Preference number: 3 (lower is better)
Translates to: ITLIYSCMRDAYSIGGISNEFCC*KPVCGH
Trigger: ATGACCACAAACTGGCTTCAAACAACAGAATTCGTT...GCTAATTCCCCCAATAGAATATGCATCCCTCATGCATGAATAAATAAGAGTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454141.5
CDS-3UTR TCA 90 bp GGCTGCTGGACACTGGCAGGAGCAGATAGCCATGCAGGCCACGTCCCCGAAAGACCACAAGAGAAGTCATaGGGACACCTCGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: GCWTLAGADSHAGHVPERPQEKS*GHLART
Trigger: CGTCCGGGCGAGGTGTCCTCATGACTTCTCTTGTGG...TCTTTCGGGGACGTGGCCTGCATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383750.8
ENST00000445388.5
ENST00000454141.5
CDS-3UTR TCA 90 bp GGCTGCTGGACACTGGCAGGAGCAGATAGCCATGCAGGCCACGTCCCCGAAAGACTGTGTCCTCCAGAGTaGGAACCGCTGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GCWTLAGADSHAGHVPERLCPPE*EPLEAA
Trigger: TGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAG...TCTTTCGGGGACGTGGCCTGCATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383750.8
CDS-3UTR GCA 90 bp TTCACTGACATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGTCGGAAGTCGGCGCCTaGCAGCTACCCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: FTDMPFSTGSLLMRFPQQSEVGA*QLPAAS
Trigger: GGAGGCGGCGGGTAGCTGGCAGGCGCCGACTTCCGA...CTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCATGTCAGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000423701.6
ENST00000449617.5
CDS-3UTR GCA 90 bp GCCAATGCAGGTAGTGTCATAGGAAGCTGTGAATTCCCACCACAGGGTCTCCAGTCGGAAGTCGGCGCCTaGCAGCTACCCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: ANAGSVIGSCEFPPQGLQSEVGA*QLPAAS
Trigger: GGAGGCGGCGGGTAGCTGGCAGGCGCCGACTTCCGA...CTGGAGACCCTGTGGTGGGAATTCACAGCTTCCTATGACACTACCTGCATTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383750.8
ENST00000445388.5
ENST00000454141.5
CDS-3UTR GCA 90 bp GGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTAGGTTCCTCAGCCCGTaGAGGTACATGTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSGVAGSRGLVQPAEPAPRFLSP*RYMLPR
Trigger: CCTGGGCAACATGTACCTGCACGGGCTGAGGAACCT...AGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGTGGGTCAGGGGTGGCTaGCTCACGAGGTTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LLPDGRIRALLIWVRGGWWVRGG*LTRFGP
Trigger: TGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCA...CCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR GCA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTTCGGAAGTCGGCGCCTaGCAGCTACCCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPSEVGA*QLPAAS
Trigger: GGAGGCGGCGGGTAGCTGGCAGGCGCCGACTTCCGA...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264454.8
CDS-3UTR GCA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTTCGGAAGTCGGCGCCTaGCAGCTACCCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFSEVGA*QLPAAS
Trigger: GGAGGCGGCGGGTAGCTGGCAGGCGCCGACTTCCGA...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp CTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCCACAGCCAGCCTTGCTaGCCTGCTGGCTATTGTCTC +
Preference number: 4 (lower is better)
Translates to: LPDGRIRALLIWVRGGWLHSQPC*PAGYCL
Trigger: GAGACAATAGCCAGCAGGCCAGCAAGGCTGGCTGTG...GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CAA 72 bp ACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTaGGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: TAPGWENQSSPH*GQGWLAHEVWS
Trigger: GGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp GGCTGCTGGACACTGGCAGGAGCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAAAATCAGTAGAGGCTaGGAGGGGCAGTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: GCWTLAGADSHAGHVPERKISRG*EGQSIP
Trigger: AGGGATGGACTGCCCCTCTCAGCCTCTACTGATTTT...TCTTTCGGGGACGTGGCCTGCATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383750.8
ENST00000445388.5
ENST00000454141.5
CDS-3UTR TCA 90 bp ACCCCATTTGCCACATCTGTGTCCTCCAGAGTGAGAACCGCTGGAGGCTGCAACCTGTGTCCTCCAGAGTaGGAACCGCTGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TPFATSVSSRVRTAGGCNLCPPE*EPLEAA
Trigger: TGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAG...GTTGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAGATGTGGCAAATGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
CDS-3UTR TCA 90 bp GGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTGGTGAACTCCTCGAATaGGATTCAGGGCAGCACACA +
Preference number: 4 (lower is better)
Translates to: GSGVAGSRGLVQPAEPAPGELLE*DSGQHT
Trigger: TGTGTGCTGCCCTGAATCTCATTCGAGGAGTTCACC...AGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
CDS-3UTR GCA 90 bp AATGCAGGTAGTGTCATAGGAAGCTGTGAATTCCCACCACAGGGTCTCCAGGAATCGGAAGTCGGCGCCTaGCAGCTACCCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: NAGSVIGSCEFPPQGLQESEVGA*QLPAAS
Trigger: GGAGGCGGCGGGTAGCTGGCAGGCGCCGACTTCCGA...TTCCTGGAGACCCTGTGGTGGGAATTCACAGCTTCCTATGACACTACCTGCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383750.8
ENST00000445388.5
ENST00000454141.5
CDS-3UTR GCA 90 bp CTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCGGTACTGAGAGGGAATaGCACCCGAATATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPDGRIRALLIWVRGGWLGTERE*HPNMPQ
Trigger: CTGGGGCATATTCGGGTGGCATTCCCTCTCAGTACC...GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCTCTGCTCCCTACCTATaGCCTGCTTCCTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LPDGRIRALLIWVRGGWLSAPYL*PASCAS
Trigger: TGAGGCACAGGAAGCAGGGCATAGGTAGGGAGCAGA...GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp GGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTCTACAAGGTGCAGTGTaGAACCCCCATATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GSGVAGSRGLVQPAEPAPLQGAV*NPHMPR
Trigger: CCTTGGCATATGGGGGTTGCACACTGCACCTTGTAG...AGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCGCCCTGGCTACAAGGTaGAGTGTGCAACCCCCATAT +
Preference number: 4 (lower is better)
Translates to: LPDGRIRALLIWVRGGWLALATR*SVQPPY
Trigger: ATATGGGGGTTGCACACTGCACCTTGTAGCCAGGGC...GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp GGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCCTCTCTCCCAGCTCTTaGCGCCACCTCGGTCGCGAT +
Preference number: 4 (lower is better)
Translates to: GSLLMRFPQQQKFDITAPLSPSS*RHLGRD
Trigger: ATCGCGACCGAGGTGGCGGCAAGAGCTGGGAGAGAG...GGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417572.5
CDS-3UTR CCA 90 bp TGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTGGGTCAGGGGTGGCTaGCTCACGAGGTTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: WENQSSPHLGQGWLAHEVWVRGG*LTRFGP
Trigger: TGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCA...AACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp GGACTCACCCAGTATTACCCTCCACTACCACTTTTGACCCTCATAACAGCACCCCCTGCCTCAGCCTCCTaGGTAGCTGGGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: GLTQYYPPLPLLTLITAPPASAS*VAGATG
Trigger: GCCTGTAGCCCCAGCTACTCAGGAGGCTGAGGCAGG...GGGTGCTGTTATGAGGGTCAAAAGTGGTAGTGGAGGGTAATACTGGGTGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTCCTGCCTCAGCCTCCTaGGTAGCTGGGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFPASAS*VAGATG
Trigger: GCCTGTAGCCCCAGCTACTCAGGAGGCTGAGGCAGG...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCGACTCTGAGCTGTGCTaGCCACCAAGTGTTACTCCT +
Preference number: 4 (lower is better)
Translates to: LPDGRIRALLIWVRGGWLDSELC*PPSVTP
Trigger: AGGAGTAACACTTGGTGGTCAGCACAGCTCAGAGTC...GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp TGGACACTGGCAGGAGCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAGCAGAAGGCCATGGCTaGTGGACACTGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: WTLAGADSHAGHVPERRKAEGHG*WTLAGA
Trigger: TGCTCCTGCCAGTGTCCAGCAGCCATGGCCTTCTGC...TTTTCTTCTTTCGGGGACGTGGCCTGCATGGCTATCTGCTCCTGCCAGTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383750.8
ENST00000445388.5
ENST00000454141.5
CDS-3UTR GCA 90 bp CTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAAATGCCACCCGAATATaGCCCAGCTGTCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: LSSFGSGVAGSRGLVQPANATRI*PSCLHP
Trigger: TGGGTGGAGACAGCTGGGGCATATTCGGGTGGCATT...TGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp TGCTGGACACTGGCAGGAGCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAGAATGGCTGCTGGACACTaGCAGGAGCAGATAGCCATG +
Preference number: 4 (lower is better)
Translates to: CWTLAGADSHAGHVPERRMAAGH*QEQIAM
Trigger: CATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCCAT...TCTTCTTTCGGGGACGTGGCCTGCATGGCTATCTGCTCCTGCCAGTGTCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383750.8
ENST00000445388.5
ENST00000454141.5
CDS-3UTR CCA 90 bp TGCTGGACACTGGCAGGAGCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAGAGAAAAGCGTATGGCCTaGAGGCTAGGCCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: CWTLAGADSHAGHVPERREKRMA*RLGQCR
Trigger: CCTGCATTGGCCTAGCCTCCAGGCCATACGCTTTTC...TCTTCTTTCGGGGACGTGGCCTGCATGGCTATCTGCTCCTGCCAGTGTCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000445388.5
CDS-3UTR CCA 90 bp CTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCTCCTGCAGTAATGCTTaGCACAGAACCAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPDGRIRALLIWVRGGWLSCSNA*HRTKAG
Trigger: CCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGA...GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp GGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTAAAAGCAGGAGCTTATaGTCACATGCCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSGVAGSRGLVQPAEPAPKSRSL*SHASSC
Trigger: GCAGCTGGAGGCATGTGACCATAAGCTCCTGCTTTT...AGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTTGGGTCAGGGGTGGCTaGCTCACGAGGTTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PQQQKFDITAPGWENQSSWVRGG*LTRFGP
Trigger: TGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCA...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp ACCCCATTTGCCACATCTGTGTCCTCCAGAGTGAGAACCGCTGGAGGCTGCAACCATTTGGGTCAGGGGTaGCTGGCTCACGAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: TPFATSVSSRVRTAGGCNHLGQG*LAHEVW
Trigger: CCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATG...GTTGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAGATGTGGCAAATGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449617.5
3UTR CAA 72 bp TCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTaGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: SSFGSGVAGSRG*VQPAEPAPWIL
Trigger: CAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCCCACAAGAGAAGTCATaGGGACACCTCGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSPQEKS*GHLART
Trigger: CGTCCGGGCGAGGTGTCCTCATGACTTCTCTTGTGG...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000423701.6
ENST00000449617.5
CDS-3UTR TCA 90 bp CTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGCCACAAGAGAAGTCATaGGGACACCTCGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: LMRFPQQQKFDITAPGWEPQEKS*GHLART
Trigger: CGTCCGGGCGAGGTGTCCTCATGACTTCTCTTGTGG...CTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000423701.6
ENST00000449617.5
CDS-3UTR TCA 90 bp CTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCTGTCATAGGAAGCTGTaGATTCCCACCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LPDGRIRALLIWVRGGWLCHRKL*IPTTGS
Trigger: AGACCCTGTGGTGGGAATTCACAGCTTCCTATGACA...GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp GTGCAGTGTGCAACCCCCATATGCCAAGGGGCAGCTGCTATCTTCCAGCAGAGAATGGTCTCGATCTCTTaGCCTCGTGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: VQCATPICQGAAAIFQQRMVSIS*PRDLPT
Trigger: GGTGGGCAGATCACGAGGTCAAGAGATCGAGACCAT...TCTCTGCTGGAAGATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACACTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCGCCACACTCTGGCCTTaGTACAGTAGATGGGACTTA +
Preference number: 4 (lower is better)
Translates to: LPDGRIRALLIWVRGGWLATLWP*YSRWDL
Trigger: TAAGTCCCATCTACTGTATCAAGGCCAGAGTGTGGC...GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCTCCTGCATGTCACAATaGGTGGCCAACTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: LPDGRIRALLIWVRGGWLSCMSQ*VANSFT
Trigger: TGTGAAGGAGTTGGCCACTCATTGTGACATGCAGGA...GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp TGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTCCAGCCTTGCTGGCCTaGTGGCTATTGTCTCTGACT +
Preference number: 4 (lower is better)
Translates to: WENQSSPHLGQGWLAHEVPALLA*WLLSLT
Trigger: AGTCAGAGACAATAGCCAGCAGGCCAGCAAGGCTGG...AACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGTGTCCTCACTTGTGCTaGACTATGCAAGCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLPDGRIRALLIWVRGGWCPHLC*TMQASS
Trigger: GCTGCTTGCTTGCATAGTGCAGCACAAGTGAGGACA...CCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCATCTGATCACCATAAATaGTCCCACCCCTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSSFGSGVAGSRGLVQPASDHHK*SHPCLS
Trigger: GGACAGGCAGGGGTGGGAGCATTTATGGTGATCAGA...TGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGCAGGTAGGCCGTGGTaGGCGTGCGCGAGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLAGRPW*ACASLE
Trigger: CTCAAGACTCGCGCACGCGCACCACGGCCTACCTGC...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273156.11
CDS-3UTR CCA 90 bp TGCCACATCTGTGTCCTCCAGAGTGAGAACCGCTGGAGGCTGCAACTTGAGCTCTGCAGAACCTCGACCTaGATACTGGGCCAGTCGCAA +
Preference number: 4 (lower is better)
Translates to: CHICVLQSENRWRLQLELCRTST*ILGQSQ
Trigger: TTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCA...GAGCTCAAGTTGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAGATGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
CDS-3UTR CCA 90 bp CTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGACCCAGGGCTGTCACTaGTTCCATTCGGAAATTAGG +
Preference number: 4 (lower is better)
Translates to: LLPDGRIRALLIWVRGGWTQGCH*FHSEIR
Trigger: CCTAATTTCCGAATGGAACCAGTGACAGCCCTGGGT...CCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp TGCCACATCTGTGTCCTCCAGAGTGAGAACCGCTGGAGGCTGCAACTTGAGCTCCTGGCTCACGAGGTTTaGTCCAACCAGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: CHICVLQSENRWRLQLELLAHEV*SNQQNQ
Trigger: CTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAG...GAGCTCAAGTTGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAGATGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR CCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTGGGTCAGGGGTGGCTaGCTCACGAGGTTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSWVRGG*LTRFGP
Trigger: TGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCA...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp CCATTTGCCACATCTGTGTCCTCCAGAGTGAGAACCGCTGGAGGCTGCAACTTGAGAGCTCTCCTCATTTaGGTCAGGGGTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PFATSVSSRVRTAGGCNLRALLI*VRGGWL
Trigger: GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCT...CAAGTTGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAGATGTGGCAAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR TCA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATCCACAAGAGAAGTCATaGGGACACCTCGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: QQKFDITAPGWENQSSPHPQEKS*GHLART
Trigger: CGTCCGGGCGAGGTGTCCTCATGACTTCTCTTGTGG...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000423701.6
ENST00000449617.5
CDS-3UTR TCA 90 bp GTGCAGTGTGCAACCCCCATATGCCAAGGGGCAGCTGCTATCTTCCAGCAGAGAAAAATCAGTAGAGGCTaGGAGGGGCAGTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: VQCATPICQGAAAIFQQRKISRG*EGQSIP
Trigger: AGGGATGGACTGCCCCTCTCAGCCTCTACTGATTTT...TCTCTGCTGGAAGATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACACTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264454.8
CDS-3UTR TCA 90 bp ACCCTTCCTAAGAGCATGGAGCCACACTCTGGCCTTGATACAGTAGATGGGACTCTGTGTCCTCCAGAGTaGGAACCGCTGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TLPKSMEPHSGLDTVDGTLCPPE*EPLEAA
Trigger: TGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAG...AGTCCCATCTACTGTATCAAGGCCAGAGTGTGGCTCCATGCTCTTAGGAAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGTCAGACTGCTTCTCCTaGAGCTGCCTTGTTAGTATC +
Preference number: 4 (lower is better)
Translates to: LLPDGRIRALLIWVRGGWSDCFS*SCLVSI
Trigger: GATACTAACAAGGCAGCTTCAGGAGAAGCAGTCTGA...CCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp GCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAAAAAGCTCTTTCTGGATaGGCCCCCAGATCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: AGSRGLVQPAEPAPWILEKALSG*APRSSC
Trigger: ACAGCTGGATCTGGGGGCTCATCCAGAAAGAGCTTT...TTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp GCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAAAATGTGAGCAATGTCTaGACAGGGGCTTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: AGSRGLVQPAEPAPWILENVSNV*TGACQA
Trigger: TGCCTGGCAAGCCCCTGTTCAGACATTGCTCACATT...TTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCAGCAGCAGAAGTTTaGCATCACTGCTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: PQQQKFDITAPGWENQSSPAAEV*HHCSRM
Trigger: CATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGG...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR GCA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTGCAGAAGGCCATGGCTaGTGGACACTGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFAEGHG*WTLAGA
Trigger: TGCTCCTGCCAGTGTCCAGCAGCCATGGCCTTCTGC...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR GCA 90 bp CAAGTGCATCGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTGTCCTCGCAGAAGGCCATGGCTaGTGGACACTGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QVHRCVTIHHPICHICVLAEGHG*WTLAGA
Trigger: TGCTCCTGCCAGTGTCCAGCAGCCATGGCCTTCTGC...GAGGACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
CDS-3UTR GCA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTGTCACCAGGCTGGAGTaGAGTGGCTCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFVTRLE*SGSISA
Trigger: AGCCGAGATCGAGCCACTGCACTCCAGCCTGGTGAC...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp TGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTATGCCAAGGGGCAGCTaGTATCTTCCAGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: WENQSSPHLGQGWLAHEVMPRGS*YLPAER
Trigger: TCTCTCTGCTGGAAGATAGCAGCTGCCCCTTGGCAT...AACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp TGGACACTGGCAGGAGCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAGAAAATGCAGAACCTCGACCTaGATACTGGGCCAGTCGCAA +
Preference number: 4 (lower is better)
Translates to: WTLAGADSHAGHVPERRKCRTST*ILGQSQ
Trigger: TTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCA...TTTTCTTCTTTCGGGGACGTGGCCTGCATGGCTATCTGCTCCTGCCAGTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383750.8
ENST00000445388.5
ENST00000454141.5
CDS-3UTR CCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTATGGCTGCTGGACACTaGCAGGAGCAGATAGCCATG +
Preference number: 4 (lower is better)
Translates to: PQQQKFDITAPGWENQSSMAAGH*QEQIAM
Trigger: CATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCCAT...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp CCCATTTGCCACATCTGTGTCCTCCAGAGTGAGAACCGCTGGAGGCTGCAACTTCAGAGTGAGAACCGCTaGAGGCTGCAACTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PICHICVLQSENRWRLQLQSENR*RLQLEL
Trigger: GAGCTCAAGTTGCAGCCTCCAGCGGTTCTCACTCTG...AAGTTGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAGATGTGGCAAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
CDS-3UTR CCA 90 bp GCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAACAGGCTGGGGTGCAGTaGTGTGATTATAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: AGSRGLVQPAEPAPWILEQAGVQ*CDYSSW
Trigger: CCATGAGCTATAATCACACCACTGCACCCCAGCCTG...TTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAAAAAGCAGGAGCTTATaGTCACATGCCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSFGSGVAGSRGLVQPAKSRSL*SHASSC
Trigger: GCAGCTGGAGGCATGTGACCATAAGCTCCTGCTTTT...TGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCCACAGCCAGCCTTGCTaGCCTGCTGGCTATTGTCTC +
Preference number: 4 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLHSQPC*PAGYCL
Trigger: GAGACAATAGCCAGCAGGCCAGCAAGGCTGGCTGTG...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp GGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCCTGGCTCACGAGGTTTaGTCCAACCAGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: GSLLMRFPQQQKFDITAPLAHEV*SNQQNQ
Trigger: CTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAG...GGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGTGGGTCAGGGGTGGCTaGCTCACGAGGTTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QLCHQYTWADVSESSHSQWVRGG*LTRFGP
Trigger: TGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCA...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCAGAGCTCTCCTCATTTaGGTCAGGGGTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSRALLI*VRGGWL
Trigger: GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCT...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp GGCCAACTCCTTCACAGAACAGCAAATAGCAGCCCTGGCTACAAGGTGCAGTGTAGAGCTCTCCTCATTTaGGTCAGGGGTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GQLLHRTANSSPGYKVQCRALLI*VRGGWL
Trigger: GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCT...ACACTGCACCTTGTAGCCAGGGCTGCTATTTGCTGTTCTGTGAAGGAGTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CAGGGCTGTCACTGGTTCCATTCGGAAATTAGGAGCAGGCTCCAAGTGCATCGGAAAATCAGTAGAGGCTaGGAGGGGCAGTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: QGCHWFHSEIRSRLQVHRKISRG*EGQSIP
Trigger: AGGGATGGACTGCCCCTCTCAGCCTCTACTGATTTT...CCGATGCACTTGGAGCCTGCTCCTAATTTCCGAATGGAACCAGTGACAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR TCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTGCAAGGCTAAACTCTTaGGCCGTCTCCTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: PQQQKFDITAPGWENQSSARLNS*AVSSIP
Trigger: TGGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGC...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR TCA 90 bp GGCTGCTGGACACTGGCAGGAGCAGATAGCCATGCAGGCCACGTCCCCGAAAGATGCCACTTCACTTTCTaGATGATGCTGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: GCWTLAGADSHAGHVPERCHFTF*MMLSNS
Trigger: TGAGTTTGACAGCATCATTCAGAAAGTGAAGTGGCA...TCTTTCGGGGACGTGGCCTGCATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383750.8
CDS-3UTR TCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGCTGTGTCCTCCAGAGTaGGAACCGCTGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLLCPPE*EPLEAA
Trigger: TGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAG...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCTGTGTCCTCCAGAGTaGGAACCGCTGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QQLCHQYTWADVSESSHSLCPPE*EPLEAA
Trigger: TGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAG...GGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCTGTGTCCTCCAGAGTaGGAACCGCTGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: KFDITAPGWENQSSPHLGLCPPE*EPLEAA
Trigger: TGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAG...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAAAGTGCATCGGTGTGTaGCCATTCATCACCCCATTT +
Preference number: 4 (lower is better)
Translates to: LSSFGSGVAGSRGLVQPAKCIGV*PFITPF
Trigger: AAATGGGGTGATGAATGGTCACACACCGATGCACTT...TGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTGGTGAACTCCTCGAATaGGATTCAGGGCAGCACACA +
Preference number: 4 (lower is better)
Translates to: PQQQKFDITAPGWENQSSGELLE*DSGQHT
Trigger: TGTGTGCTGCCCTGAATCTCATTCGAGGAGTTCACC...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGGAATGTTCTGCAAGGTaGACTCCTCGAATGAGATTC +
Preference number: 4 (lower is better)
Translates to: LLPDGRIRALLIWVRGGWECSAR*TPRMRF
Trigger: GAATCTCATTCGAGGAGTTCACCTTGCAGAACATTC...CCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCATGGTCTCGATCTCTTaGCCTCGTGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSMVSIS*PRDLPT
Trigger: GGTGGGCAGATCACGAGGTCAAGAGATCGAGACCAT...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATTGGGGCCTCTGGTACTaGGAGGGAATGCCACCCGAA +
Preference number: 4 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDWGLWY*EGMPPE
Trigger: TTCGGGTGGCATTCCCTCTCAGTACCAGAGGCCCCA...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCCAGCTGACGGTCAGCTaGCTGGTGCACTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVQLTVS*LVHSFP
Trigger: AGGGAAAGAGTGCACCAGTCAGCTGACCGTCAGCTG...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp ACCCTTCCTAAGAGCATGGAGCCACACTCTGGCCTTGATACAGTAGATGGGACTCAGCTGACGGTCAGCTaGCTGGTGCACTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: TLPKSMEPHSGLDTVDGTQLTVS*LVHSFP
Trigger: AGGGAAAGAGTGCACCAGTCAGCTGACCGTCAGCTG...AGTCCCATCTACTGTATCAAGGCCAGAGTGTGGCTCCATGCTCTTAGGAAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp AACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCGCAGAAGGCCATGGCTaGTGGACACTGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: NSSAINTHGQMFPNPAIPAEGHG*WTLAGA
Trigger: TGCTCCTGCCAGTGTCCAGCAGCCATGGCCTTCTGC...GGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR GCA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCCCAGCCTTGCTGGCCTaGTGGCTATTGTCTCTGACT +
Preference number: 4 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLPALLA*WLLSLT
Trigger: AGTCAGAGACAATAGCCAGCAGGCCAGCAAGGCTGG...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCCCTACCTATGCCCTaGTTCCTGTGCCTCACACAG +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSSLPMP*FLCLTQ
Trigger: CTGTGTGAGGCACAGGAAGCAGGGCATAGGTAGGGA...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp AACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCGAGAACCCCCAGCTCTaGTCCCTACCTATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: NSSAINTHGQMFPNPAIPENPQL*SLPMPC
Trigger: GCAGGGCATAGGTAGGGAGCAGAGCTGGGGGTTCTC...GGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp GGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCATGCCAAGGGGCAGCTaGTATCTTCCAGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GSLLMRFPQQQKFDITAPMPRGS*YLPAER
Trigger: TCTCTCTGCTGGAAGATAGCAGCTGCCCCTTGGCAT...GGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCTGTGCAACCCCCATATaGCAAGGGGCAGCTGCTATC +
Preference number: 4 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLCATPI*QGAAAI
Trigger: GATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACA...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTGCCTGTCCTCACTTGTaGTGCACTATGCAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PQQQKFDITAPGWENQSSACPHL*CTMQAS
Trigger: GCTTGCTTGCATAGTGCAGCACAAGTGAGGACAGGC...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp AACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCCAGGACCGGCCGCAGTaGCACTTCGACATCGAGATC +
Preference number: 4 (lower is better)
Translates to: NSSAINTHGQMFPNPAIPQDRPQ*HFDIEI
Trigger: GATCTCGATGTCGAAGTGGCACTGCGGCCGGTCCTG...GGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417572.5
CDS-3UTR CCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCCCTCGACCTGGATACTaGGCCAGTCGCAAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSPRPGY*ASRKAK
Trigger: TTTAGCCTTGCGACTGGCCCAGTATCCAGGTCGAGG...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp CGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTGTCCTCCAGAGTGAGCCTCGACCTGGATACTaGGCCAGTCGCAAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: RCVTIHHPICHICVLQSEPRPGY*ASRKAK
Trigger: TTTAGCCTTGCGACTGGCCCAGTATCCAGGTCGAGG...CTCACTCTGGAGGACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
CDS-3UTR CCA 90 bp CGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTGTCCTCCAGAGTGAGATGGCTGCTGGACACTaGCAGGAGCAGATAGCCATG +
Preference number: 4 (lower is better)
Translates to: RCVTIHHPICHICVLQSEMAAGH*QEQIAM
Trigger: CATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCCAT...CTCACTCTGGAGGACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
CDS-3UTR CCA 90 bp TTCACTGACATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGGAAAAGCGTATGGCCTaGAGGCTAGGCCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: FTDMPFSTGSLLMRFPQQEKRMA*RLGQCR
Trigger: CCTGCATTGGCCTAGCCTCCAGGCCATACGCTTTTC...CTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCATGTCAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCGAAAAGCGTATGGCCTaGAGGCTAGGCCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSEKRMA*RLGQCR
Trigger: CCTGCATTGGCCTAGCCTCCAGGCCATACGCTTTTC...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp CTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGCAGAGTGAGAACCGCTaGAGGCTGCAACTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LMRFPQQQKFDITAPGWEQSENR*RLQLEL
Trigger: GAGCTCAAGTTGCAGCCTCCAGCGGTTCTCACTCTG...CTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCCAGAGTGAGAACCGCTaGAGGCTGCAACTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSQSENR*RLQLEL
Trigger: GAGCTCAAGTTGCAGCCTCCAGCGGTTCTCACTCTG...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp GCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAAACCCAGGGCTGTCACTaGTTCCATTCGGAAATTAGG +
Preference number: 4 (lower is better)
Translates to: AGSRGLVQPAEPAPWILETQGCH*FHSEIR
Trigger: CCTAATTTCCGAATGGAACCAGTGACAGCCCTGGGT...TTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp CTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGAAAGCCACTCCTATGTaGAAAAGGATTTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLPDGRIRALLIWVRGGWKATPM*KRICQR
Trigger: CCTCTGGCAAATCCTTTTCCACATAGGAGTGGCTTT...CCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCCTGGTAGTGCCTCGGTaGTCAGGAAGCATTACCAGG +
Preference number: 4 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLLVVPR*SGSITR
Trigger: CCTGGTAATGCTTCCTGACCACCGAGGCACTACCAG...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCGCCTTGCTGGCCTGCTaGCTATTGTCTCTGACTCTG +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSALLAC*LLSLTL
Trigger: CAGAGTCAGAGACAATAGCCAGCAGGCCAGCAAGGC...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCCTGGCTCACGAGGTTTaGTCCAACCAGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLLAHEV*SNQQNQ
Trigger: CTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAG...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp TTCACTGACATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCTGGCTCACGAGGTTTaGTCCAACCAGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: FTDMPFSTGSLLMRFPQQLAHEV*SNQQNQ
Trigger: CTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAG...CTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCATGTCAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp ATATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCCATTTGGGTCAGGGGTaGCTGGCTCACGAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: IWIIGSDAQSTWGTGLHGHLGQG*LAHEVW
Trigger: CCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATG...GCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCCATTTGGGTCAGGGGTaGCTGGCTCACGAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVHLGQG*LAHEVW
Trigger: CCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATG...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTCATTTGGGTCAGGGGTaGCTGGCTCACGAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPHLGQG*LAHEVW
Trigger: CCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATG...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATAGAGCTCTCCTCATTTaGGTCAGGGGTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QQKFDITAPGWENQSSPHRALLI*VRGGWL
Trigger: GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCT...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCAAAATCAGTAGAGGCTaGGAGGGGCAGTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSKISRG*EGQSIP
Trigger: AGGGATGGACTGCCCCTCTCAGCCTCTACTGATTTT...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR TCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTTGTCATAGGAAGCTGTaGATTCCCACCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PQQQKFDITAPGWENQSSCHRKL*IPTTGS
Trigger: AGACCCTGTGGTGGGAATTCACAGCTTCCTATGACA...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGCCAGCAGCAGAAGTTTaGCATCACTGCTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: QLCHQYTWADVSESSHSQPAAEV*HHCSRM
Trigger: CATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGG...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTCCAGCAGCAGAAGTTTaGCATCACTGCTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFPAAEV*HHCSRM
Trigger: CATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGG...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp TGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTATTCCCAGATTTCACTaGCATGCCCTTTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: WENQSSPHLGQGWLAHEVIPRFH*HALFHR
Trigger: CCTGTGGAAAAGGGCATGTCAGTGAAATCTGGGAAT...AACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
CDS-3UTR GCA 90 bp CTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATTGCAGAAGGCCATGGCTaGTGGACACTGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LCHQYTWADVSESSHSQIAEGHG*WTLAGA
Trigger: TGCTCCTGCCAGTGTCCAGCAGCCATGGCCTTCTGC...AATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR GCA 90 bp GCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAAGGGATTACAGGCATGTaGCATCACATCCGGCTAATT +
Preference number: 4 (lower is better)
Translates to: AGSRGLVQPAEPAPWILEGITGM*HHIRLI
Trigger: AATTAGCCGGATGTGATGGCACATGCCTGTAATCCC...TTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGGATCATAGGCTCAGATaGCCAAAGCACCTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: LMRFPQQQKFDITAPGWEDHRLR*PKHLGY
Trigger: GTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATC...CTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp TGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTAACCTCAATGCAATCTaGTCCCACTCTGAAGCTCGT +
Preference number: 4 (lower is better)
Translates to: WENQSSPHLGQGWLAHEVNLNAI*SHSEAR
Trigger: ACGAGCTTCAGAGTGGGAGCAGATTGCATTGAGGTT...AACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTCTGCTCCCTACCTATaGCCTGCTTCCTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: QQKFDITAPGWENQSSPHSAPYL*PASCAS
Trigger: TGAGGCACAGGAAGCAGGGCATAGGTAGGGAGCAGA...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTGTGCAACCCCCATATaGCAAGGGGCAGCTGCTATC +
Preference number: 4 (lower is better)
Translates to: QQKFDITAPGWENQSSPHCATPI*QGAAAI
Trigger: GATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACA...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCGCCCTGGCTACAAGGTaGAGTGTGCAACCCCCATAT +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVALATR*SVQPPY
Trigger: ATATGGGGGTTGCACACTGCACCTTGTAGCCAGGGC...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTAAATGCTCCCACCCCTaGCTGTCCTCACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPKCSHP*LSSLVL
Trigger: CAGCACAAGTGAGGACAGGCAGGGGTGGGAGCATTT...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp ACCCTTCCTAAGAGCATGGAGCCACACTCTGGCCTTGATACAGTAGATGGGACTAAATGCTCCCACCCCTaGCTGTCCTCACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: TLPKSMEPHSGLDTVDGTKCSHP*LSSLVL
Trigger: CAGCACAAGTGAGGACAGGCAGGGGTGGGAGCATTT...AGTCCCATCTACTGTATCAAGGCCAGAGTGTGGCTCCATGCTCTTAGGAAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGTTGGATCCTGGAAAATaGAGGCTACGAAAGGAACAA +
Preference number: 4 (lower is better)
Translates to: LLPDGRIRALLIWVRGGWLDPGK*RLRKEQ
Trigger: TTGTTCCTTTCGTAGCCTGCATTTTCCAGGATCCAA...CCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273156.11
ENST00000417572.5
ENST00000449617.5
CDS-3UTR CCA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGCCTCGACCTGGATACTaGGCCAGTCGCAAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: QLCHQYTWADVSESSHSQPRPGY*ASRKAK
Trigger: TTTAGCCTTGCGACTGGCCCAGTATCCAGGTCGAGG...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTCCTCGACCTGGATACTaGGCCAGTCGCAAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFPRPGY*ASRKAK
Trigger: TTTAGCCTTGCGACTGGCCCAGTATCCAGGTCGAGG...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCTGCAGAACCTCGACCTaGATACTGGGCCAGTCGCAA +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVCRTST*ILGQSQ
Trigger: TTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCA...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATGGCTGCTGGACACTaGCAGGAGCAGATAGCCATG +
Preference number: 4 (lower is better)
Translates to: QLCHQYTWADVSESSHSQMAAGH*QEQIAM
Trigger: CATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCCAT...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp ATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCAAGAAAAGCGTATGGCCTaGAGGCTAGGCCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: MDHRLRCPKHLGYRSTWQEKRMA*RLGQCR
Trigger: CCTGCATTGGCCTAGCCTCCAGGCCATACGCTTTTC...TTGCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATGAAAAGCGTATGGCCTaGAGGCTAGGCCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: QQKFDITAPGWENQSSPHEKRMA*RLGQCR
Trigger: CCTGCATTGGCCTAGCCTCCAGGCCATACGCTTTTC...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCGAAAAGCGTATGGCCTaGAGGCTAGGCCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVEKRMA*RLGQCR
Trigger: CCTGCATTGGCCTAGCCTCCAGGCCATACGCTTTTC...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCCAGAGTGAGAACCGCTaGAGGCTGCAACTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVQSENR*RLQLEL
Trigger: GAGCTCAAGTTGCAGCCTCCAGCGGTTCTCACTCTG...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp AGGAGCAGGCTCCAAGTGCATCGGTGTGTGACCATTCATCACCCCATTTGCCACACCCAGGGCTGTCACTaGTTCCATTCGGAAATTAGG +
Preference number: 4 (lower is better)
Translates to: RSRLQVHRCVTIHHPICHTQGCH*FHSEIR
Trigger: CCTAATTTCCGAATGGAACCAGTGACAGCCCTGGGT...GTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTGGAGCCTGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR CCA 90 bp TTCACTGACATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGTCCTGCAGTAATGCTTaGCACAGAACCAAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FTDMPFSTGSLLMRFPQQSCSNA*HRTKAG
Trigger: CCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGA...CTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCATGTCAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp GGCCAACTCCTTCACAGAACAGCAAATAGCAGCCCTGGCTACAAGGTGCAGTGTGAAGCCTCAAACTCCTaGACTCAAGGGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GQLLHRTANSSPGYKVQCEASNS*TQGILL
Trigger: CAGGAGGATCCCTTGAGTCCAGGAGTTTGAGGCTTC...ACACTGCACCTTGTAGCCAGGGCTGCTATTTGCTGTTCTGTGAAGGAGTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp ATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCAAGATGCCCAAAGCACCTaGGGTACAGGTCTACATGGC +
Preference number: 4 (lower is better)
Translates to: MDHRLRCPKHLGYRSTWQDAQST*GTGLHG
Trigger: GCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATC...TTGCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp ATATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCAAACCTTTTGGGCTCTaGCCCCGTGGTTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: IWIIGSDAQSTWGTGLHGKPFGL*PRGWET
Trigger: GGTTTCCCAACCACGGGGCCAGAGCCCAAAAGGTTT...GCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCCATTTGGGTCAGGGGTaGCTGGCTCACGAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: NSSAINTHGQMFPNPAIPHLGQG*LAHEVW
Trigger: CCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATG...GGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTAGAGCTCTCCTCATTTaGGTCAGGGGTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KFDITAPGWENQSSPHLGRALLI*VRGGWL
Trigger: GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCT...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCATCACTGCTCCCGGATaGGAGAATCAGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSITAPG*ENQSSP
Trigger: AGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGAT...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp TGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTAATAAAAGGCGCTTGTaGGCAACAGCTCTGCCATCA +
Preference number: 4 (lower is better)
Translates to: WENQSSPHLGQGWLAHEVNKRRL*ATALPS
Trigger: TGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATT...AACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp GCCTGTGATCACTCTTATTTATTCATGCATGAGGGATGCATATTCTATTGGGGGGGCGCAGGTAGGCCGTaGTGCGCGTGCGCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: ACDHSYLFMHEGCIFYWGGAGRP*CACASL
Trigger: AAGACTCGCGCACGCGCACCACGGCCTACCTGCGCC...CCCCCAATAGAATATGCATCCCTCATGCATGAATAAATAAGAGTGATCACAGGC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000445388.5
3UTR CAA 72 bp TCTCCAAGACTTGACTCCCAGGCATGGGTGGGAGAGTaGAACCTCAATGCAATCTGCTCCCACTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SPRLDSQAWVGE*NLNAICSHSEA
Trigger: AGCTTCAGAGTGGGAGCAGATTGCATTGAGGTTCAACTCTCCCACCCATGCCTGGGAGTCAAGTCTTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTAAAATCAGTAGAGGCTaGGAGGGGCAGTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFKISRG*EGQSIP
Trigger: AGGGATGGACTGCCCCTCTCAGCCTCTACTGATTTT...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR TCA 90 bp GGACTCACCCAGTATTACCCTCCACTACCACTTTTGACCCTCATAACAGCACCCGCAAGGCTAAACTCTTaGGCCGTCTCCTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: GLTQYYPPLPLLTLITAPARLNS*AVSSIP
Trigger: TGGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGC...GGGTGCTGTTATGAGGGTCAAAAGTGGTAGTGGAGGGTAATACTGGGTGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264454.8
CDS-3UTR TCA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATGCAAGGCTAAACTCTTaGGCCGTCTCCTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: QQKFDITAPGWENQSSPHARLNS*AVSSIP
Trigger: TGGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGC...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR TCA 90 bp GGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTACTTCACTTTCTGAATaGTGCTGTCAAACTCAAGAA +
Preference number: 4 (lower is better)
Translates to: GSGVAGSRGLVQPAEPAPTSLSE*CCQTQE
Trigger: TTCTTGAGTTTGACAGCATCATTCAGAAAGTGAAGT...AGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp GGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCTCAGACTGCTTCTCCTaGAGCTGCCTTGTTAGTATC +
Preference number: 4 (lower is better)
Translates to: GSLLMRFPQQQKFDITAPSDCFS*SCLVSI
Trigger: GATACTAACAAGGCAGCTTCAGGAGAAGCAGTCTGA...GGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp GTGCAGTGTGCAACCCCCATATGCCAAGGGGCAGCTGCTATCTTCCAGCAGAGAATAAACCTCCAACCCTaGACCAAGTCAAACCTAAGC +
Preference number: 4 (lower is better)
Translates to: VQCATPICQGAAAIFQQRINLQP*TKSNLS
Trigger: GCTTAGGTTTGACTTGGTTCAGGGTTGGAGGTTTAT...TCTCTGCTGGAAGATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACACTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTAGGCCTTGCAGCATCTaGTACCAGAAGGCACCTCTA +
Preference number: 4 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPRPCSI*YQKAPL
Trigger: TAGAGGTGCCTTCTGGTATCAGATGCTGCAAGGCCT...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCGCCACACTCTGGCCTTaGTACAGTAGATGGGACTTA +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSATLWP*YSRWDL
Trigger: TAAGTCCCATCTACTGTATCAAGGCCAGAGTGTGGC...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGCCAGCAGCAGAAGTTTaGCATCACTGCTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLPAAEV*HHCSRM
Trigger: CATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGG...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATCCACAAGAGAAGTCATaGGGACACCGCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QQKFDITAPGWENQSSPHPQEKS*GHRFSP
Trigger: GGGAGAAAAGCGGTGTCCTCATGACTTCTCTTGTGG...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417572.5
CDS-3UTR GCA 90 bp GGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCATTCATCACCCCATTTaGCACATCTGTGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSLLMRFPQQQKFDITAPIHHPI*HICVLQ
Trigger: CTGGAGGACACAGATGTGGCAAATGGGGTGATGAAT...GGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR GCA 90 bp TGGACACTGGCAGGAGCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAATTCATCACCCCATTTaGCACATCTGTGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: WTLAGADSHAGHVPERRKIHHPI*HICVLQ
Trigger: CTGGAGGACACAGATGTGGCAAATGGGGTGATGAAT...TTTTCTTCTTTCGGGGACGTGGCCTGCATGGCTATCTGCTCCTGCCAGTGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383750.8
CDS-3UTR GCA 90 bp TTCACTGACATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGACTGGCTGGAGATCCTaGAGTAATGCTTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: FTDMPFSTGSLLMRFPQQTGWRS*SNAWHR
Trigger: TCTGTGCCAAGCATTACTGCAGGATCTCCAGCCAGT...CTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCATGTCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp GCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAAAGGCACAAGCCACCGTaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: AGSRGLVQPAEPAPWILERHKPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCACGGTGGCTTGTGCCT...TTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp TTCACTGACATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGTTTGAGACGGAGTCTTaGTTTGTCACCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FTDMPFSTGSLLMRFPQQFETES*FVTRLE
Trigger: CTCCAGCCTGGTGACAAAGCAAGACTCCGTCTCAAA...CTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCATGTCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCAATGCCACCCGAATATaGCCCAGCTGTCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: QQLCHQYTWADVSESSHSNATRI*PSCLHP
Trigger: TGGGTGGAGACAGCTGGGGCATATTCGGGTGGCATT...GGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATCTACAAGGTGCAGTGTaGAACCCCCATATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: QQKFDITAPGWENQSSPHLQGAV*NPHMPR
Trigger: CCTTGGCATATGGGGGTTGCACACTGCACCTTGTAG...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGGCCTGTCCTCACTTGTaGTGCACTATGCAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: QLCHQYTWADVSESSHSQACPHL*CTMQAS
Trigger: GCTTGCTTGCATAGTGCAGCACAAGTGAGGACAGGC...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTGCGTCCCCAGACCTGTaGAATATTCTACACGAAAAC +
Preference number: 4 (lower is better)
Translates to: PQQQKFDITAPGWENQSSASPDL*NILHEN
Trigger: GTTTTCGTGTAGAATATTGCACAGGTCTGGGGACGC...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AATGCAGGTAGTGTCATAGGAAGCTGTGAATTCCCACCACAGGGTCTCCAGGAACCTCGACCTGGATACTaGGCCAGTCGCAAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: NAGSVIGSCEFPPQGLQEPRPGY*ASRKAK
Trigger: TTTAGCCTTGCGACTGGCCCAGTATCCAGGTCGAGG...TTCCTGGAGACCCTGTGGTGGGAATTCACAGCTTCCTATGACACTACCTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383750.8
ENST00000445388.5
ENST00000454141.5
CDS-3UTR CCA 90 bp GCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCACTCCTCGACCTGGATACTaGGCCAGTCGCAAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: ADSHAGHVPERRKTEFCTPRPGY*ASRKAK
Trigger: TTTAGCCTTGCGACTGGCCCAGTATCCAGGTCGAGG...AGTGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGCTATCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR CCA 90 bp AACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCTGCAGAACCTCGACCTaGATACTGGGCCAGTCGCAA +
Preference number: 4 (lower is better)
Translates to: NSSAINTHGQMFPNPAIPCRTST*ILGQSQ
Trigger: TTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCA...GGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTATGGCTGCTGGACACTaGCAGGAGCAGATAGCCATG +
Preference number: 4 (lower is better)
Translates to: KFDITAPGWENQSSPHLGMAAGH*QEQIAM
Trigger: CATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCCAT...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGATGGCTGCTGGACACTaGCAGGAGCAGATAGCCATG +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLMAAGH*QEQIAM
Trigger: CATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCCAT...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGAGTGAGAACCGCTaGAGGCTGCAACTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KFDITAPGWENQSSPHLGQSENR*RLQLEL
Trigger: GAGCTCAAGTTGCAGCCTCCAGCGGTTCTCACTCTG...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCCAGGCTGGGGTGCAGTaGTGTGATTATAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVQAGVQ*CDYSSW
Trigger: CCATGAGCTATAATCACACCACTGCACCCCAGCCTG...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATGATGCCCAAAGCACCTaGGGTACAGGTCTACATGGC +
Preference number: 4 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDDAQST*GTGLHG
Trigger: GCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATC...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGCTGGCTCACGAGGTTTaGTCCAACCAGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLLAHEV*SNQQNQ
Trigger: CTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAG...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp AAGAGGCAGGAGAGTTGGAGAACAAGAGCACCTAGAAAAGAACAGAGGAGCTCAAGAGCTCTCCTCATTTaGGTCAGGGGTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KRQESWRTRAPRKEQRSSRALLI*VRGGWL
Trigger: GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCT...TGAGCTCCTCTGTTCTTTTCTAGGTGCTCTTGTTCTCCAACTCTCCTGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp ATATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCATCACTGCTCCCGGATaGGAGAATCAGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: IWIIGSDAQSTWGTGLHGITAPG*ENQSSP
Trigger: AGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGAT...GCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATCACTGCTCCCGGATaGGAGAATCAGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QLCHQYTWADVSESSHSQITAPG*ENQSSP
Trigger: AGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGAT...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp GCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAATGCCATCAATACACATaGGCAGATGTTTCCGAATCC +
Preference number: 4 (lower is better)
Translates to: AGSRGLVQPAEPAPWILECHQYT*ADVSES
Trigger: GGATTCGGAAACATCTGCCCATGTGTATTGATGGCA...TTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGGCAGAACCAGCTCCTTaGATCCTGGAAAATGCAGGC +
Preference number: 4 (lower is better)
Translates to: QLCHQYTWADVSESSHSQAEPAP*ILENAG
Trigger: GCCTGCATTTTCCAGGATCCAAGGAGCTGGTTCTGC...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273156.11
ENST00000417572.5
ENST00000449617.5
CDS-3UTR CCA 90 bp GCTCCAAGTGCATCGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTGTGCAGAACCAGCTCCTTaGATCCTGGAAAATGCAGGC +
Preference number: 4 (lower is better)
Translates to: APSASVCDHSSPHLPHLCAEPAP*ILENAG
Trigger: GCCTGCATTTTCCAGGATCCAAGGAGCTGGTTCTGC...ACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR TCA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTAAAATCAGTAGAGGCTaGGAGGGGCAGTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: KFDITAPGWENQSSPHLGKISRG*EGQSIP
Trigger: AGGGATGGACTGCCCCTCTCAGCCTCTACTGATTTT...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR TCA 90 bp CAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCGCAAGGCTAAACTCTTaGGCCGTCTCCTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: QQLCHQYTWADVSESSHSARLNS*AVSSIP
Trigger: TGGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGC...GGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR TCA 90 bp AGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCACTTGCTTGGCAAGGCTAAACTCTTaGGCCGTCTCCTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: SHAGHVPERRKTEFCTCLARLNS*AVSSIP
Trigger: TGGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGC...CAAGCAAGTGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR TCA 90 bp AGTGCATCGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTGTCCTCCATGTCATAGGAAGCTGTaGATTCCCACCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SASVCDHSSPHLPHLCPPCHRKL*IPTTGS
Trigger: AGACCCTGTGGTGGGAATTCACAGCTTCCTATGACA...TGGAGGACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
CDS-3UTR TCA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTGTCATAGGAAGCTGTaGATTCCCACCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QQKFDITAPGWENQSSPHCHRKL*IPTTGS
Trigger: AGACCCTGTGGTGGGAATTCACAGCTTCCTATGACA...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTTGTCATAGGAAGCTGTaGATTCCCACCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFCHRKL*IPTTGS
Trigger: AGACCCTGTGGTGGGAATTCACAGCTTCCTATGACA...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTGTCCTCCAGAGTGAGAAGTGCATCGGTGTGTaGCCATTCATCACCCCATTT +
Preference number: 4 (lower is better)
Translates to: RCVTIHHPICHICVLQSEKCIGV*PFITPF
Trigger: AAATGGGGTGATGAATGGTCACACACCGATGCACTT...CTCACTCTGGAGGACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
CDS-3UTR TCA 90 bp CAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCGGTGAACTCCTCGAATaGGATTCAGGGCAGCACACA +
Preference number: 4 (lower is better)
Translates to: QQLCHQYTWADVSESSHSGELLE*DSGQHT
Trigger: TGTGTGCTGCCCTGAATCTCATTCGAGGAGTTCACC...GGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTGAACTCCTCGAATaGGATTCAGGGCAGCACACA +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLGELLE*DSGQHT
Trigger: TGTGTGCTGCCCTGAATCTCATTCGAGGAGTTCACC...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCATTTCTGCTCATGCTaGCAAACTTATCATCTAGAA +
Preference number: 4 (lower is better)
Translates to: LLPDGRIRALLIWVRGGWHFCSC*QTYHLE
Trigger: TTCTAGATGATAAGTTTGTCAGCATGAGCAGAAATG...CCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp GGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCCAAAACAAGCCAGGCTaGAATTTCGGGAAACCTAAG +
Preference number: 4 (lower is better)
Translates to: GSLLMRFPQQQKFDITAPQNKPG*NFGKPK
Trigger: CTTAGGTTTCCCGAAATTTCAGCCTGGCTTGTTTTG...GGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp TTCACTGACATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGAGCAAACTCCCAAAATaGCCTCCTGCGTGGTACAAA +
Preference number: 4 (lower is better)
Translates to: FTDMPFSTGSLLMRFPQQSKLPK*PPAWYK
Trigger: TTTGTACCACGCAGGAGGTCATTTTGGGAGTTTGCT...CTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCATGTCAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCACATGTAGATGTTAACTaGTATCCACACATTCGACCT +
Preference number: 4 (lower is better)
Translates to: LSSFGSGVAGSRGLVQPAHVDVN*YPHIRP
Trigger: AGGTCGAATGTGTGGATATCAGTTAACATCTACATG...TGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTGGGATTTCCCTCGGATaGAATCACCAGAACTTCTTT +
Preference number: 4 (lower is better)
Translates to: PQQQKFDITAPGWENQSSGISLG*NHQNFF
Trigger: AAAGAAGTTCTGGTGATTTCATCCGAGGGAAATCCC...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCAGGCCTTGCAGCATCTaGTACCAGAAGGCACCTCTA +
Preference number: 4 (lower is better)
Translates to: QQLCHQYTWADVSESSHSRPCSI*YQKAPL
Trigger: TAGAGGTGCCTTCTGGTATCAGATGCTGCAAGGCCT...GGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp ACCCTTCCTAAGAGCATGGAGCCACACTCTGGCCTTGATACAGTAGATGGGACTCATGGGTGGGAGAGTTaGACCTCAATGCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: TLPKSMEPHSGLDTVDGTHGWES*TSMQSA
Trigger: AGCAGATTGCATTGAGGTTCAACTCTCCCACCCATG...AGTCCCATCTACTGTATCAAGGCCAGAGTGTGGCTCCATGCTCTTAGGAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCATTCCCAGATTTCACTaGCATGCCCTTTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSIPRFH*HALFHR
Trigger: CCTGTGGAAAAGGGCATGTCAGTGAAATCTGGGAAT...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp TTCACTGACATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGATTCCCAGATTTCACTaGCATGCCCTTTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: FTDMPFSTGSLLMRFPQQIPRFH*HALFHR
Trigger: CCTGTGGAAAAGGGCATGTCAGTGAAATCTGGGAAT...CTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCATGTCAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR GCA 90 bp GGCCAACTCCTTCACAGAACAGCAAATAGCAGCCCTGGCTACAAGGTGCAGTGTATTCATCACCCCATTTaGCACATCTGTGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GQLLHRTANSSPGYKVQCIHHPI*HICVLQ
Trigger: CTGGAGGACACAGATGTGGCAAATGGGGTGATGAAT...ACACTGCACCTTGTAGCCAGGGCTGCTATTTGCTGTTCTGTGAAGGAGTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATACTGGCTGGAGATCCTaGAGTAATGCTTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: QQKFDITAPGWENQSSPHTGWRS*SNAWHR
Trigger: TCTGTGCCAAGCATTACTGCAGGATCTCCAGCCAGT...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp TGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTGATTTGGAACCAGTTTaGTGGTATCAAGGATCACAC +
Preference number: 4 (lower is better)
Translates to: WENQSSPHLGQGWLAHEVDLEPV*WYQGSH
Trigger: GTGTGATCCTTGATACCAGCAAACTGGTTCCAAATC...AACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATTGGTACTGAGAGGGAATaGCACCCGAATATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LCHQYTWADVSESSHSQIGTERE*HPNMPQ
Trigger: CTGGGGCATATTCGGGTGGCATTCCCTCTCAGTACC...AATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp GGACTCACCCAGTATTACCCTCCACTACCACTTTTGACCCTCATAACAGCACCCTGTCCTCACTTGTGCTaGACTATGCAAGCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLTQYYPPLPLLTLITAPCPHLC*TMQASS
Trigger: GCTGCTTGCTTGCATAGTGCAGCACAAGTGAGGACA...GGGTGCTGTTATGAGGGTCAAAAGTGGTAGTGGAGGGTAATACTGGGTGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CTTGTGGGCAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCATCTGATCACCATAAATaGTCCCACCCCTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LVGNSSAINTHGQMFPNPSDHHK*SHPCLS
Trigger: GGACAGGCAGGGGTGGGAGCATTTATGGTGATCAGA...TGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp TTCACTGACATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGGCGTCCCCAGACCTGTaGAATATTCTACACGAAAAC +
Preference number: 4 (lower is better)
Translates to: FTDMPFSTGSLLMRFPQQASPDL*NILHEN
Trigger: GTTTTCGTGTAGAATATTGCACAGGTCTGGGGACGC...CTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCATGTCAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGTGTGGGCAACAGCTCTaGCATCAATACACATGGGCA +
Preference number: 4 (lower is better)
Translates to: QLCHQYTWADVSESSHSQCGQQL*HQYTWA
Trigger: TGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACA...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR GCA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTTGTGGGCAACAGCTCTaGCATCAATACACATGGGCA +
Preference number: 4 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPCGQQL*HQYTWA
Trigger: TGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACA...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCACCCAGGGCTGTCACTaGTTCCATTCGGAAATTAGG +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVTQGCH*FHSEIR
Trigger: CCTAATTTCCGAATGGAACCAGTGACAGCCCTGGGT...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTACCCAGGGCTGTCACTaGTTCCATTCGGAAATTAGG +
Preference number: 4 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPTQGCH*FHSEIR
Trigger: CCTAATTTCCGAATGGAACCAGTGACAGCCCTGGGT...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCTTTCCAATTTCCTCATaGGCAACCTGTAAAGAATGT +
Preference number: 4 (lower is better)
Translates to: LPDGRIRALLIWVRGGWLFPISS*ATCKEC
Trigger: ACATTCTTTACAGGTTGCCCATGAGGAAATTGGAAA...GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCTTCATAGTCCTGGCTaGACTGTAGAACAGGTACAA +
Preference number: 4 (lower is better)
Translates to: PQQQKFDITAPGWENQSSLHSPG*TVEQVQ
Trigger: TTGTACCTGTTCTACAGTCCAGCCAGGACTATGAAG...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCTTTAAAGTGGTTCCTTaGAGACAACTCTCAATGACT +
Preference number: 4 (lower is better)
Translates to: LPDGRIRALLIWVRGGWLFKVVP*RQLSMT
Trigger: AGTCATTGAGAGTTGTCTCCAAGGAACCACTTTAAA...GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp GGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTATTTGGATTTTAAAGTaGTTCCTTGGAGACAACTCT +
Preference number: 4 (lower is better)
Translates to: GSGVAGSRGLVQPAEPAPIWILK*FLGDNS
Trigger: AGAGTTGTCTCCAAGGAACCACTTTAAAATCCAAAT...AGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp ATATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCATTTTGGAGGCGCTCTaGGAACAGGTACACAGGGTA +
Preference number: 4 (lower is better)
Translates to: IWIIGSDAQSTWGTGLHGILEAL*EQVHRV
Trigger: TACCCTGTGTACCTGTTCCCAGAGCGCCTCCAAAAT...GCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATTCTGGTAGTGCCTCGGTaGTCAGGAAGCATTACCAGG +
Preference number: 4 (lower is better)
Translates to: LCHQYTWADVSESSHSQILVVPR*SGSITR
Trigger: CCTGGTAATGCTTCCTGACCACCGAGGCACTACCAG...AATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp GTGCAGTGTGCAACCCCCATATGCCAAGGGGCAGCTGCTATCTTCCAGCAGAGATTGGAACCAGTTTGCTaGTATCAAGGATCACACAAG +
Preference number: 4 (lower is better)
Translates to: VQCATPICQGAAAIFQQRLEPVC*YQGSHK
Trigger: CTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAA...TCTCTGCTGGAAGATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACACTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATACAGTGAGTCCATGGTaGAGTGAGGATAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: QQKFDITAPGWENQSSPHTVSPW*SEDNSW
Trigger: CCAGGAGTTATCCTCACTCCACCATGGACTCACTGT...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AAGAGGCAGGAGAGTTGGAGAACAAGAGCACCTAGAAAAGAACAGAGGAGCTCACCCTTCCTAAGAGCATaGAGCCACACTCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KRQESWRTRAPRKEQRSSPFLRA*SHTLAL
Trigger: CAAGGCCAGAGTGTGGCTCCATGCTCTTAGGAAGGG...TGAGCTCCTCTGTTCTTTTCTAGGTGCTCTTGTTCTCCAACTCTCCTGCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCATCACTGCTCCCGGATaGGAGAATCAGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: NSSAINTHGQMFPNPAIPITAPG*ENQSSP
Trigger: AGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGAT...GGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCAATAAAAGGCGCTTGTaGGCAACAGCTCTGCCATCA +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSNKRRL*ATALPS
Trigger: TGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATT...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp GCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAAAATGAATAAAAGGCGCTTGTaGGCAACAGCTCTGCCATCA +
Preference number: 4 (lower is better)
Translates to: AHEVWSNQQNQLLGSWKMNKRRL*ATALPS
Trigger: TGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATT...CATTTTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR TCA 90 bp AAAACTGAATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGCTGCCCACAAGAGAAGTCATaGGGACACCTCGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: KTEFCTCLALNSPVAVCCPQEKS*GHLART
Trigger: CGTCCGGGCGAGGTGTCCTCATGACTTCTCTTGTGG...GCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAATTCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR TCA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTTGTCATAGGAAGCTGTaGATTCCCACCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: KFDITAPGWENQSSPHLGCHRKL*IPTTGS
Trigger: AGACCCTGTGGTGGGAATTCACAGCTTCCTATGACA...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp ACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCATGTCATAGGAAGCTGTaGATTCCCACCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TALPSIHMGRCFRIQPFPCHRKL*IPTTGS
Trigger: AGACCCTGTGGTGGGAATTCACAGCTTCCTATGACA...TGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAAGTGCATCGGTGTGTaGCCATTCATCACCCCATTT +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVKCIGV*PFITPF
Trigger: AAATGGGGTGATGAATGGTCACACACCGATGCACTT...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp GCTCCAAGTGCATCGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTGTAAGTGCATCGGTGTGTaGCCATTCATCACCCCATTT +
Preference number: 4 (lower is better)
Translates to: APSASVCDHSSPHLPHLCKCIGV*PFITPF
Trigger: AAATGGGGTGATGAATGGTCACACACCGATGCACTT...ACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
CDS-3UTR TCA 90 bp ACCCTTCCTAAGAGCATGGAGCCACACTCTGGCCTTGATACAGTAGATGGGACTTTCAGTCCAGTTGGCTaGAAAGGATGGAAACTGGAG +
Preference number: 4 (lower is better)
Translates to: TLPKSMEPHSGLDTVDGTFSPVG*KGWKLE
Trigger: CTCCAGTTTCCATCCTTTTCAGCCAACTGGACTGAA...AGTCCCATCTACTGTATCAAGGCCAGAGTGTGGCTCCATGCTCTTAGGAAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGTCCTGCATGTCACAATaGGTGGCCAACTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLSCMSQ*VANSFT
Trigger: TGTGAAGGAGTTGGCCACTCATTGTGACATGCAGGA...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp ATATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCATTCCCAGATTTCACTaGCATGCCCTTTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: IWIIGSDAQSTWGTGLHGIPRFH*HALFHR
Trigger: CCTGTGGAAAAGGGCATGTCAGTGAAATCTGGGAAT...GCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp GCCAATGCAGGTAGTGTCATAGGAAGCTGTGAATTCCCACCACAGGGTCTCCAGAAAGTCACAACCTTCTaGAGAACCTCGACCTGGATA +
Preference number: 4 (lower is better)
Translates to: ANAGSVIGSCEFPPQGLQKVTTF*RTSTWI
Trigger: TATCCAGGTCGAGGTTCTGCAGAAGGTTGTGACTTT...CTGGAGACCCTGTGGTGGGAATTCACAGCTTCCTATGACACTACCTGCATTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383750.8
ENST00000445388.5
ENST00000454141.5
CDS-3UTR GCA 90 bp ACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGCTGCAGGTATATTGTCTCTGCAGAAGGCCATGGCTaGTGGACACTGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TCLALNSPVAVCCRYIVSAEGHG*WTLAGA
Trigger: TGCTCCTGCCAGTGTCCAGCAGCCATGGCCTTCTGC...AGAGACAATATACCTGCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR GCA 90 bp CTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGCCTCATGACTTCCACTaGAACTGTTTAACATCCCCA +
Preference number: 4 (lower is better)
Translates to: LMRFPQQQKFDITAPGWEPHDFH*NCLTSP
Trigger: TGGGGATGTTAAACAGTTGCAGTGGAAGTCATGAGG...CTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGTTTGGCCTTCCAAAGTaGTGGGAATACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: QLCHQYTWADVSESSHSQFGLPK*WEYRHE
Trigger: CTCATGCCTGTATTCCCAGCACTTTGGAAGGCCAAA...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp GTGCAGTGTGCAACCCCCATATGCCAAGGGGCAGCTGCTATCTTCCAGCAGAGATTCACCTGCTGGGTATaGAGAAAATTATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: VQCATPICQGAAAIFQQRFTCWV*RKLCRC
Trigger: ACATCTGCATAATTTTCTGCATACCCAGCAGGTGAA...TCTCTGCTGGAAGATAGCAGCTGCCCCTTGGCATATGGGGGTTGCACACTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CTTGTGGGCAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCATTTGAGACGGAGTCTTaGTTTGTCACCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LVGNSSAINTHGQMFPNPFETES*FVTRLE
Trigger: CTCCAGCCTGGTGACAAAGCAAGACTCCGTCTCAAA...TGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTACTTGTGCTGCACTATaGAAGCAAGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPTCAAL*KQAAGS
Trigger: AGAACCTGCTGCTTGCTTGCATAGTGCAGCACAAGT...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp ATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCAAACTTGTGCTGCACTATaGAAGCAAGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: MDHRLRCPKHLGYRSTWQTCAAL*KQAAGS
Trigger: AGAACCTGCTGCTTGCTTGCATAGTGCAGCACAAGT...TTGCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp AAGAGGCAGGAGAGTTGGAGAACAAGAGCACCTAGAAAAGAACAGAGGAGCTCAACATCAATGGTACCATaGGCTCTGTGCCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: KRQESWRTRAPRKEQRSSTSMVP*ALCPGS
Trigger: ACTCCCTGGGCACAGAGCGCATGGTACCATTGATGT...TGAGCTCCTCTGTTCTTTTCTAGGTGCTCTTGTTCTCCAACTCTCCTGCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGTGTGGGCAACAGCTCTaGCATCAATACACATGGGCA +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLCGQQL*HQYTWA
Trigger: TGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACA...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR GCA 90 bp CTTGTGGGCAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCATGTGGGCAACAGCTCTaGCATCAATACACATGGGCA +
Preference number: 4 (lower is better)
Translates to: LVGNSSAINTHGQMFPNPCGQQL*HQYTWA
Trigger: TGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACA...TGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR GCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACAGGCCGTGGTGCGCGTaGGCGAGTCTTGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYRPWCA*ASLEPP
Trigger: GGGTGGCTCAAGACTCGCGCACGCGCACCACGGCCT...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273156.11
CDS-3UTR GCA 90 bp CCCATTTGCCACATCTGTGTCCTCCAGAGTGAGAACCGCTGGAGGCTGCAACTTTTGGATCCTGGAAAATaGAGGCTACGAAAGGAACAA +
Preference number: 4 (lower is better)
Translates to: PICHICVLQSENRWRLQLLDPGK*RLRKEQ
Trigger: TTGTTCCTTTCGTAGCCTGCATTTTCCAGGATCCAA...AAGTTGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAGATGTGGCAAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR CCA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTACCCAGGGCTGTCACTaGTTCCATTCGGAAATTAGG +
Preference number: 4 (lower is better)
Translates to: KFDITAPGWENQSSPHLGTQGCH*FHSEIR
Trigger: CCTAATTTCCGAATGGAACCAGTGACAGCCCTGGGT...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp CTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATTGAAGCCTCAAACTCCTaGACTCAAGGGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LCHQYTWADVSESSHSQIEASNS*TQGILL
Trigger: CAGGAGGATCCCTTGAGTCCAGGAGTTTGAGGCTTC...AATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTTGTGATTATAGCTCATaGAAGCCTCAAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PQQQKFDITAPGWENQSSCDYSS*KPQTPG
Trigger: TCCAGGAGTTTGAGGCTTCCATGAGCTATAATCACA...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCACATTCGACCTGGTGTaGATAACATCTCTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLTFDLV*ITSLVV
Trigger: CACTACCAGAGATGTTATCCACACCAGGTCGAATGT...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCACAGTGAGTCCATGGTaGAGTGAGGATAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: NSSAINTHGQMFPNPAIPTVSPW*SEDNSW
Trigger: CCAGGAGTTATCCTCACTCCACCATGGACTCACTGT...GGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTGCCATCAATACACATaGGCAGATGTTTCCGAATCC +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSCHQYT*ADVSES
Trigger: GGATTCGGAAACATCTGCCCATGTGTATTGATGGCA...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCTGCCATCAATACACATaGGCAGATGTTTCCGAATCC +
Preference number: 4 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLCHQYT*ADVSES
Trigger: GGATTCGGAAACATCTGCCCATGTGTATTGATGGCA...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTAATAAAAGGCGCTTGTaGGCAACAGCTCTGCCATCA +
Preference number: 4 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFNKRRL*ATALPS
Trigger: TGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATT...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGGGCGCAGGTAGGCCGTaGTGCGCGTGCGCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMGAGRP*CACASL
Trigger: AAGACTCGCGCACGCGCACCACGGCCTACCTGCGCC...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273156.11
CDS-3UTR CCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCCAGCTCCTTGGATCCTaGAAAATGCAGGCTACGAAA +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVQLLGS*KMQATK
Trigger: TTTCGTAGCCTGCATTTTCCAGGATCCAAGGAGCTG...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273156.11
ENST00000417572.5
ENST00000449617.5
CDS-3UTR TCA 90 bp CTTCACTTTCTGAATGATGCTGTCAAACTCAAGAAAAGCGTATGGCCTGGAGGCAAAATCAGTAGAGGCTaGGAGGGGCAGTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: LHFLNDAVKLKKSVWPGGKISRG*EGQSIP
Trigger: AGGGATGGACTGCCCCTCTCAGCCTCTACTGATTTT...GCCTCCAGGCCATACGCTTTTCTTGAGTTTGACAGCATCATTCAGAAAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383750.8
CDS-3UTR TCA 90 bp CTTCACTTTCTGAATGATGCTGTCAAACTCAAGAAAAGCGTATGGCCTGGAGGCGCAAGGCTAAACTCTTaGGCCGTCTCCTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: LHFLNDAVKLKKSVWPGGARLNS*AVSSIP
Trigger: TGGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGC...GCCTCCAGGCCATACGCTTTTCTTGAGTTTGACAGCATCATTCAGAAAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383750.8
CDS-3UTR TCA 90 bp ACCCCATTTGCCACATCTGTGTCCTCCAGAGTGAGAACCGCTGGAGGCTGCAACACTTCACTTTCTGAATaGTGCTGTCAAACTCAAGAA +
Preference number: 4 (lower is better)
Translates to: TPFATSVSSRVRTAGGCNTSLSE*CCQTQE
Trigger: TTCTTGAGTTTGACAGCATCATTCAGAAAGTGAAGT...GTTGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAGATGTGGCAAATGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
CDS-3UTR TCA 90 bp GCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAAAATGTGCCACTTCACTTTCTaGATGATGCTGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: AHEVWSNQQNQLLGSWKMCHFTF*MMLSNS
Trigger: TGAGTTTGACAGCATCATTCAGAAAGTGAAGTGGCA...CATTTTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR TCA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTAAGTGCATCGGTGTGTaGCCATTCATCACCCCATTT +
Preference number: 4 (lower is better)
Translates to: KFDITAPGWENQSSPHLGKCIGV*PFITPF
Trigger: AAATGGGGTGATGAATGGTCACACACCGATGCACTT...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGAAGTGCATCGGTGTGTaGCCATTCATCACCCCATTT +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLKCIGV*PFITPF
Trigger: AAATGGGGTGATGAATGGTCACACACCGATGCACTT...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTGTAAAGTGCCACTaGATCCATGTTCATTCACCT +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSSVKCH*IHVHSP
Trigger: AGGTGAATGAACATGGATTCAGTGGCACTTTACAGA...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGCAAAACAAGCCAGGCTaGAATTTCGGGAAACCTAAG +
Preference number: 4 (lower is better)
Translates to: QLCHQYTWADVSESSHSQQNKPG*NFGKPK
Trigger: CTTAGGTTTCCCGAAATTTCAGCCTGGCTTGTTTTG...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CTTGTGGGCAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAAGCAAACTCCCAAAATaGCCTCCTGCGTGGTACAAA +
Preference number: 4 (lower is better)
Translates to: LVGNSSAINTHGQMFPNPSKLPK*PPAWYK
Trigger: TTTGTACCACGCAGGAGGTCATTTTGGGAGTTTGCT...TGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp ACCCTTCCTAAGAGCATGGAGCCACACTCTGGCCTTGATACAGTAGATGGGACTCCATGCAACTGTGGTTaGACTATTCAGATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TLPKSMEPHSGLDTVDGTPCNCG*TIQIPD
Trigger: GTCTGGAATCTGAATAGTTCAACCACAGTTGCATGG...AGTCCCATCTACTGTATCAAGGCCAGAGTGTGGCTCCATGCTCTTAGGAAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTATAAACCTCCAACCCTaGACCAAGTCAAACCTAAGC +
Preference number: 4 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPINLQP*TKSNLS
Trigger: GCTTAGGTTTGACTTGGTTCAGGGTTGGAGGTTTAT...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp AGAACCAGCTCCTTGGATCCTGGAATAAACCAAACATCAATGGTACCATGCGCTGTGCTACAACAACAGTaGGTCCATGGTGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: RTSSLDPGINQTSMVPCAVLQQQ*VHGGVR
Trigger: CCTCACTCCACCATGGACTCACTGTTGTTGTAGCAC...AGCGCATGGTACCATTGATGTTTGGTTTATTCCAGGATCCAAGGAGCTGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp AGAACCAGCTCCTTGGATCCTGGAATAAACCAAACATCAATGGTACCATGCGCTGGACTTAACACACTCTaGTGCTCAAGGCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RTSSLDPGINQTSMVPCAGLNTL*CSRPCS
Trigger: GCTGCAAGGCCTTGAGCATCAGAGTGTGTTAAGTCC...AGCGCATGGTACCATTGATGTTTGGTTTATTCCAGGATCCAAGGAGCTGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp AGAACCAGCTCCTTGGATCCTGGAATAAACCAAACATCAATGGTACCATGCGCTAATGTGAGCAATGTCTaGACAGGGGCTTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RTSSLDPGINQTSMVPCANVSNV*TGACQA
Trigger: TGCCTGGCAAGCCCCTGTTCAGACATTGCTCACATT...AGCGCATGGTACCATTGATGTTTGGTTTATTCCAGGATCCAAGGAGCTGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CTTGTGGGCAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAATTCCCAGATTTCACTaGCATGCCCTTTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LVGNSSAINTHGQMFPNPIPRFH*HALFHR
Trigger: CCTGTGGAAAAGGGCATGTCAGTGAAATCTGGGAAT...TGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp GAGCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCAAGTTCGACCTATTCCTaGGACTGTCTTTCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: EQIAMQATSPKEEKLNSASSTYS*DCLSSA
Trigger: AGCGGAAGAAAGACAGTCTCAGGAATAGGTCGAACT...TGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGCTATCTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR GCA 90 bp ATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCAAAAAGTCACAACCTTCTaGAGAACCTCGACCTGGATA +
Preference number: 4 (lower is better)
Translates to: MDHRLRCPKHLGYRSTWQKVTTF*RTSTWI
Trigger: TATCCAGGTCGAGGTTCTGCAGAAGGTTGTGACTTT...TTGCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264454.8
CDS-3UTR GCA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTAAAGTCACAACCTTCTaGAGAACCTCGACCTGGATA +
Preference number: 4 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFKVTTF*RTSTWI
Trigger: TATCCAGGTCGAGGTTCTGCAGAAGGTTGTGACTTT...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR GCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGATTCATCACCCCATTTaGCACATCTGTGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLIHHPI*HICVLQ
Trigger: CTGGAGGACACAGATGTGGCAAATGGGGTGATGAAT...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR GCA 90 bp ACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAATTCATCACCCCATTTaGCACATCTGTGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TALPSIHMGRCFRIQPFPIHHPI*HICVLQ
Trigger: CTGGAGGACACAGATGTGGCAAATGGGGTGATGAAT...TGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR GCA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCAAGGTTCCTCAGCCCGTaGAGGTACATGTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPRFLSP*RYMLPR
Trigger: CCTGGGCAACATGTACCTGCACGGGCTGAGGAACCT...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGTTTGGCCTTCCAAAGTaGTGGGAATACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLFGLPK*WEYRHE
Trigger: CTCATGCCTGTATTCCCAGCACTTTGGAAGGCCAAA...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGAGGCACAAGCCACCGTaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: QLCHQYTWADVSESSHSQRHKPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCACGGTGGCTTGTGCCT...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGAACCTCAATGCAATCTaGTCCCACTCTGAAGCTCGT +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLNLNAI*SHSEAR
Trigger: ACGAGCTTCAGAGTGGGAGCAGATTGCATTGAGGTT...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp GCATATTCTATTGGGGGAATTAGCCTCAGACTTCTCCACATCTATAATCCCAGGCCTCGACCTGGATACTaGGCCAGTCGCAAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: AYSIGGISLRLLHIYNPRPRPGY*ASRKAK
Trigger: TTTAGCCTTGCGACTGGCCCAGTATCCAGGTCGAGG...CCTGGGATTATAGATGTGGAGAAGTCTGAGGCTAATTCCCCCAATAGAATATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445388.5
CDS-3UTR CCA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTCTTCATAGTCCTGGCTaGACTGTAGAACAGGTACAA +
Preference number: 4 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPLHSPG*TVEQVQ
Trigger: TTGTACCTGTTCTACAGTCCAGCCAGGACTATGAAG...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AAGAGGCAGGAGAGTTGGAGAACAAGAGCACCTAGAAAAGAACAGAGGAGCTCAGCACAGAACCAAGGCTaGGTATCAAGCAACCTCATG +
Preference number: 4 (lower is better)
Translates to: KRQESWRTRAPRKEQRSSAQNQG*VSSNLM
Trigger: CATGAGGTTGCTTGATACCCAGCCTTGGTTCTGTGC...TGAGCTCCTCTGTTCTTTTCTAGGTGCTCTTGTTCTCCAACTCTCCTGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTTGTTCCATGCAACTGTaGTTGAACTATTCAGATTCC +
Preference number: 4 (lower is better)
Translates to: PQQQKFDITAPGWENQSSCSMQL*LNYSDS
Trigger: GGAATCTGAATAGTTCAACCACAGTTGCATGGAACA...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTACATTCGACCTGGTGTaGATAACATCTCTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPTFDLV*ITSLVV
Trigger: CACTACCAGAGATGTTATCCACACCAGGTCGAATGT...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGTGCCATCAATACACATaGGCAGATGTTTCCGAATCC +
Preference number: 4 (lower is better)
Translates to: QLCHQYTWADVSESSHSQCHQYT*ADVSES
Trigger: GGATTCGGAAACATCTGCCCATGTGTATTGATGGCA...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATAATAAAAGGCGCTTGTaGGCAACAGCTCTGCCATCA +
Preference number: 4 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDNKRRL*ATALPS
Trigger: TGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATT...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp ACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCACAGCTCCTTGGATCCTaGAAAATGCAGGCTACGAAA +
Preference number: 4 (lower is better)
Translates to: TALPSIHMGRCFRIQPFPQLLGS*KMQATK
Trigger: TTTCGTAGCCTGCATTTTCCAGGATCCAAGGAGCTG...TGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273156.11
ENST00000417572.5
ENST00000449617.5
3UTR CAA 72 bp GTGAGTCCATGGTGGAGTGAGGATAACTCCTGGGATTaGGAACCAGTTTGCTGGTATCAAGGATCACACAAG +
Preference number: 4 (lower is better)
Translates to: VSPWWSEDNSWD*EPVCWYQGSHK
Trigger: CTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAATCCCAGGAGTTATCCTCACTCCACCATGGACTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CAA 72 bp CTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTaGGATCCTGGAATAAACCAAACATCAATGGTACCA +
Preference number: 4 (lower is better)
Translates to: LTRFGPTSRTSS*DPGINQTSMVP
Trigger: TGGTACCATTGATGTTTGGTTTATTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp GAATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGCTGCAGGTATAAAATCAGTAGAGGCTaGGAGGGGCAGTCCATCCCT +
Preference number: 4 (lower is better)
Translates to: EFCTCLALNSPVAVCCRYKISRG*EGQSIP
Trigger: AGGGATGGACTGCCCCTCTCAGCCTCTACTGATTTT...ATACCTGCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR TCA 90 bp GGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCACTTCACTTTCTGAATaGTGCTGTCAAACTCAAGAA +
Preference number: 4 (lower is better)
Translates to: GSLLMRFPQQQKFDITAPTSLSE*CCQTQE
Trigger: TTCTTGAGTTTGACAGCATCATTCAGAAAGTGAAGT...GGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCTGCCACTTCACTTTCTaGATGATGCTGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVCHFTF*MMLSNS
Trigger: TGAGTTTGACAGCATCATTCAGAAAGTGAAGTGGCA...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGTGCCACTTCACTTTCTaGATGATGCTGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: QLCHQYTWADVSESSHSQCHFTF*MMLSNS
Trigger: TGAGTTTGACAGCATCATTCAGAAAGTGAAGTGGCA...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTGAATGTTCTGCAAGGTaGACTCCTCGAATGAGATTC +
Preference number: 4 (lower is better)
Translates to: KFDITAPGWENQSSPHLGECSAR*TPRMRF
Trigger: GAATCTCATTCGAGGAGTTCACCTTGCAGAACATTC...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp ACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGAATGTTCTGCAAGGTaGACTCCTCGAATGAGATTC +
Preference number: 4 (lower is better)
Translates to: TALPSIHMGRCFRIQPFPECSAR*TPRMRF
Trigger: GAATCTCATTCGAGGAGTTCACCTTGCAGAACATTC...TGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCGGAGACAACTCTCAATaGCTAAAACCAGTGTTATTG +
Preference number: 4 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLGDNSQ*LKPVLL
Trigger: CAATAACACTGGTTTTAGTCATTGAGAGTTGTCTCC...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp GGACTCACCCAGTATTACCCTCCACTACCACTTTTGACCCTCATAACAGCACCCTCTGTAAAGTGCCACTaGATCCATGTTCATTCACCT +
Preference number: 4 (lower is better)
Translates to: GLTQYYPPLPLLTLITAPSVKCH*IHVHSP
Trigger: AGGTGAATGAACATGGATTCAGTGGCACTTTACAGA...GGGTGCTGTTATGAGGGTCAAAAGTGGTAGTGGAGGGTAATACTGGGTGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGCCATGCAACTGTGGTTaGACTATTCAGATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLPCNCG*TIQIPD
Trigger: GTCTGGAATCTGAATAGTTCAACCACAGTTGCATGG...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp AACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAAAGTCACAACCTTCTaGAGAACCTCGACCTGGATA +
Preference number: 4 (lower is better)
Translates to: NSSAINTHGQMFPNPAIPKVTTF*RTSTWI
Trigger: TATCCAGGTCGAGGTTCTGCAGAAGGTTGTGACTTT...GGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR GCA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATAAAGTCACAACCTTCTaGAGAACCTCGACCTGGATA +
Preference number: 4 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDKVTTF*RTSTWI
Trigger: TATCCAGGTCGAGGTTCTGCAGAAGGTTGTGACTTT...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR GCA 90 bp CTTGTGGGCAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCACCTCATGACTTCCACTaGAACTGTTTAACATCCCCA +
Preference number: 4 (lower is better)
Translates to: LVGNSSAINTHGQMFPNPPHDFH*NCLTSP
Trigger: TGGGGATGTTAAACAGTTGCAGTGGAAGTCATGAGG...TGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp GGCCAACTCCTTCACAGAACAGCAAATAGCAGCCCTGGCTACAAGGTGCAGTGTTACATGGCAACCCAATaGCACATAGGAAAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GQLLHRTANSSPGYKVQCYMATQ*HIGKEN
Trigger: GTTTTCTTTTCCTATGTGGCATTGGGTTGCCATGTA...ACACTGCACCTTGTAGCCAGGGCTGCTATTTGCTGTTCTGTGAAGGAGTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp ACCCTTCCTAAGAGCATGGAGCCACACTCTGGCCTTGATACAGTAGATGGGACTGGACCGTTTCTTTACTaGCTGCTGAATATGGATCAT +
Preference number: 4 (lower is better)
Translates to: TLPKSMEPHSGLDTVDGTGPFLY*LLNMDH
Trigger: ATGATCCATATTCAGCAGGCAGTAAAGAAACGGTCC...AGTCCCATCTACTGTATCAAGGCCAGAGTGTGGCTCCATGCTCTTAGGAAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATGATTTGGAACCAGTTTaGTGGTATCAAGGATCACAC +
Preference number: 4 (lower is better)
Translates to: QQKFDITAPGWENQSSPHDLEPV*WYQGSH
Trigger: GTGTGATCCTTGATACCAGCAAACTGGTTCCAAATC...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCATCCCTACCTATGCCCTaGTTCCTGTGCCTCACACAG +
Preference number: 4 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPSLPMP*FLCLTQ
Trigger: CTGTGTGAGGCACAGGAAGCAGGGCATAGGTAGGGA...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCTTGGATCCTGGAAAATaGAGGCTACGAAAGGAACAA +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVLDPGK*RLRKEQ
Trigger: TTGTTCCTTTCGTAGCCTGCATTTTCCAGGATCCAA...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273156.11
ENST00000417572.5
ENST00000449617.5
CDS-3UTR GCA 90 bp GCCAATGCAGGTAGTGTCATAGGAAGCTGTGAATTCCCACCACAGGGTCTCCAGACTGAATTCTGCACTTaGTTGGCTTTAAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: ANAGSVIGSCEFPPQGLQTEFCT*LALNSP
Trigger: AGGACTGTTTAAAGCCAAGCAAGTGCAGAATTCAGT...CTGGAGACCCTGTGGTGGGAATTCACAGCTTCCTATGACACTACCTGCATTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR CCA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTAAAAGATCACGGACATaGTCCACAAGAGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFKRSRT*STREVM
Trigger: CATGACTTCTCTTGTGGACCATGTCCGTGATCTTTT...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp AGGCTCCAAGTGCATCGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTAAAAGATCACGGACATaGTCCACAAGAGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: RLQVHRCVTIHHPICHICKRSRT*STREVM
Trigger: CATGACTTCTCTTGTGGACCATGTCCGTGATCTTTT...ACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTGGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
CDS-3UTR CCA 90 bp ATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGCTGCAGGTATATTGCAGAACCTCGACCTaGATACTGGGCCAGTCGCAA +
Preference number: 4 (lower is better)
Translates to: ILHLLGFKQSCSCLLQVYCRTST*ILGQSQ
Trigger: TTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCA...ATATACCTGCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR CCA 90 bp AATTTTACCCTAAATAAAAGGCGCTTGTGGGCAACAGCTCTGCCATCAATACACGAAAAGCGTATGGCCTaGAGGCTAGGCCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: NFTLNKRRLWATALPSIHEKRMA*RLGQCR
Trigger: CCTGCATTGGCCTAGCCTCCAGGCCATACGCTTTTC...GTGTATTGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAGGGTAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp AATTTTACCCTAAATAAAAGGCGCTTGTGGGCAACAGCTCTGCCATCAATACACCAGAGTGAGAACCGCTaGAGGCTGCAACTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: NFTLNKRRLWATALPSIHQSENR*RLQLEL
Trigger: GAGCTCAAGTTGCAGCCTCCAGCGGTTCTCACTCTG...GTGTATTGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAGGGTAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp AGAACCAGCTCCTTGGATCCTGGAATAAACCAAACATCAATGGTACCATGCGCTATTTTGGAGGCGCTCTaGGAACAGGTACACAGGGTA +
Preference number: 4 (lower is better)
Translates to: RTSSLDPGINQTSMVPCAILEAL*EQVHRV
Trigger: TACCCTGTGTACCTGTTCCCAGAGCGCCTCCAAAAT...AGCGCATGGTACCATTGATGTTTGGTTTATTCCAGGATCCAAGGAGCTGGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTGTTCCATGCAACTGTaGTTGAACTATTCAGATTCC +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSCSMQL*LNYSDS
Trigger: GGAATCTGAATAGTTCAACCACAGTTGCATGGAACA...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATAGTGAGGATAACTCCTaGGATTTGGAACCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDSEDNS*DLEPVC
Trigger: GCAAACTGGTTCCAAATCCCAGGAGTTATCCTCACT...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCTGCCATCAATACACATaGGCAGATGTTTCCGAATCC +
Preference number: 4 (lower is better)
Translates to: QQLCHQYTWADVSESSHSCHQYT*ADVSES
Trigger: GGATTCGGAAACATCTGCCCATGTGTATTGATGGCA...GGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATTGCCATCAATACACATaGGCAGATGTTTCCGAATCC +
Preference number: 4 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDCHQYT*ADVSES
Trigger: GGATTCGGAAACATCTGCCCATGTGTATTGATGGCA...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp GCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCACTTGCTTGGTTTGAAGCCAGTTTGTaGTCATTTGTTATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AMQATSPKEEKLNSALAWFEASL*SFVMAA
Trigger: GGCTGCCATAACAAATGACCACAAACTGGCTTCAAA...CCAAGCAAGTGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454141.5
CDS-3UTR TCA 90 bp AATTTTACCCTAAATAAAAGGCGCTTGTGGGCAACAGCTCTGCCATCAATACACGCAAGGCTAAACTCTTaGGCCGTCTCCTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: NFTLNKRRLWATALPSIHARLNS*AVSSIP
Trigger: TGGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGC...GTGTATTGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAGGGTAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR TCA 90 bp CTTGTGGGCAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCATGCCACTTCACTTTCTaGATGATGCTGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: LVGNSSAINTHGQMFPNPCHFTF*MMLSNS
Trigger: TGAGTTTGACAGCATCATTCAGAAAGTGAAGTGGCA...TGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACCTGTGTCCTCCAGAGTaGGAACCGCTGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYLCPPE*EPLEAA
Trigger: TGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAG...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp ATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCAATGCCTTGTTAGTATCTaGTATGAAGACAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: MDHRLRCPKHLGYRSTWQCLVSI*YEDRKA
Trigger: GGCTTTTCTGTCTTCATATCAGATACTAACAAGGCA...TTGCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCCATTTCTGCTCATGCTaGCAAACTTATCATCTAGAA +
Preference number: 4 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLHFCSC*QTYHLE
Trigger: TTCTAGATGATAAGTTTGTCAGCATGAGCAGAAATG...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp AAGAGGCAGGAGAGTTGGAGAACAAGAGCACCTAGAAAAGAACAGAGGAGCTCAGGGATTTCCCTCGGATaGAATCACCAGAACTTCTTT +
Preference number: 4 (lower is better)
Translates to: KRQESWRTRAPRKEQRSSGISLG*NHQNFF
Trigger: AAAGAAGTTCTGGTGATTTCATCCGAGGGAAATCCC...TGAGCTCCTCTGTTCTTTTCTAGGTGCTCTTGTTCTCCAACTCTCCTGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp AATTTTACCCTAAATAAAAGGCGCTTGTGGGCAACAGCTCTGCCATCAATACACGGACTTAACACACTCTaGTGCTCAAGGCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: NFTLNKRRLWATALPSIHGLNTL*CSRPCS
Trigger: GCTGCAAGGCCTTGAGCATCAGAGTGTGTTAAGTCC...GTGTATTGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAGGGTAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACTGGGGCCTCTGGTACTaGGAGGGAATGCCACCCGAA +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYWGLWY*EGMPPE
Trigger: TTCGGGTGGCATTCCCTCTCAGTACCAGAGGCCCCA...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCAGACTCTGAGCTGTGCTaGCCACCAAGTGTTACTCCT +
Preference number: 4 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPDSELC*PPSVTP
Trigger: AGGAGTAACACTTGGTGGTCAGCACAGCTCAGAGTC...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACGCAGAAGGCCATGGCTaGTGGACACTGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYAEGHG*WTLAGA
Trigger: TGCTCCTGCCAGTGTCCAGCAGCCATGGCCTTCTGC...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR GCA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCAATAACACTGGAAAATaGAGGCTACGAAAGGAACAA +
Preference number: 4 (lower is better)
Translates to: FPQQQKFDITAPGWENQSNNTGK*RLRKEQ
Trigger: TTGTTCCTTTCGTAGCCTGCATTTTCCAGTGTTATT...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGGTCACCAGGCTGGAGTaGAGTGGCTCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMVTRLE*SGSISA
Trigger: AGCCGAGATCGAGCCACTGCACTCCAGCCTGGTGAC...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGGAGAACCCCCAGCTCTaGTCCCTACCTATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMENPQL*SLPMPC
Trigger: GCAGGGCATAGGTAGGGAGCAGAGCTGGGGGTTCTC...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATACTGAATTCTGCACTTaGTTGGCTTTAAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: QQKFDITAPGWENQSSPHTEFCT*LALNSP
Trigger: AGGACTGTTTAAAGCCAAGCAAGTGCAGAATTCAGT...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR GCA 90 bp CCATTTGCCACATCTGTGTCCTCCAGAGTGAGAACCGCTGGAGGCTGCAACTTGAGAAAAACTGAATTCTaGACTTGCTTGGCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: PFATSVSSRVRTAGGCNLRKTEF*TCLALN
Trigger: GTTTAAAGCCAAGCAAGTGCAGAATTCAGTTTTTCT...CAAGTTGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAGATGTGGCAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR CCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGAAAAGATCACGGACATaGTCCACAAGAGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLKRSRT*STREVM
Trigger: CATGACTTCTCTTGTGGACCATGTCCGTGATCTTTT...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp GTGAGAGAACGAATTCTGTTGTTTGAAGCCAGTTTGTGGTCATTTGTTATGGCAATGGCTGCTGGACACTaGCAGGAGCAGATAGCCATG +
Preference number: 4 (lower is better)
Translates to: VRERILLFEASLWSFVMAMAAGH*QEQIAM
Trigger: CATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCCAT...TGCCATAACAAATGACCACAAACTGGCTTCAAACAACAGAATTCGTTCTCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454141.5
CDS-3UTR CCA 90 bp GCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAAAATGTTTCCAATTTCCTCATaGGCAACCTGTAAAGAATGT +
Preference number: 4 (lower is better)
Translates to: AHEVWSNQQNQLLGSWKMFPISS*ATCKEC
Trigger: ACATTCTTTACAGGTTGCCCATGAGGAAATTGGAAA...CATTTTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR CCA 90 bp CTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATTAAAGCCACTCCTATGTaGAAAAGGATTTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LCHQYTWADVSESSHSQIKATPM*KRICQR
Trigger: CCTCTGGCAAATCCTTTTCCACATAGGAGTGGCTTT...AATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTATGAGCCATCATGCCTaGCCCATATCCAAATATTTT +
Preference number: 4 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPMSHHA*PISKYF
Trigger: AAAATATTTGGATATGGGCCAGGCATGATGGCTCAT...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATTGTGATTATAGCTCATaGAAGCCTCAAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDCDYSS*KPQTPG
Trigger: TCCAGGAGTTTGAGGCTTCCATGAGCTATAATCACA...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATATAACTCCTGGGATTTaGAACCAGTTTGCTGGTATC +
Preference number: 4 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDITPGI*NQFAGI
Trigger: GATACCAGCAAACTGGTTCCAAATCCCAGGAGTTAT...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGATAACTCCTGGGATTTaGAACCAGTTTGCTGGTATC +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLITPGI*NQFAGI
Trigger: GATACCAGCAAACTGGTTCCAAATCCCAGGAGTTAT...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CAA 72 bp TCTGCTCCCACTCTGAAGCTCGTCTACCCACCCCATTaGTTACAATTAAAGATGGTTTTCTCATCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SAPTLKLVYPPH*LQLKMVFSSLQ
Trigger: CTGGAGGGATGAGAAAACCATCTTTAATTGTAACAAATGGGGTGGGTAGACGAGCTTCAGAGTGGGAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CAA 72 bp AAACATTTGGAATGTGAGCAATGTCTGAACAGGGGCTaGCCAGGCACATCTGATCACCATAAATGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: KHLECEQCLNRG*PGTSDHHKCSH
Trigger: GTGGGAGCATTTATGGTGATCAGATGTGCCTGGCAAGCCCCTGTTCAGACATTGCTCACATTCCAAATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp GCCTGTGATCACTCTTATTTATTCATGCATGAGGGATGCATATTCTATTGGGGGTGTCATAGGAAGCTGTaGATTCCCACCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ACDHSYLFMHEGCIFYWGCHRKL*IPTTGS
Trigger: AGACCCTGTGGTGGGAATTCACAGCTTCCTATGACA...CCCCCAATAGAATATGCATCCCTCATGCATGAATAAATAAGAGTGATCACAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR TCA 90 bp CTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATTTGCCACTTCACTTTCTaGATGATGCTGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: LCHQYTWADVSESSHSQICHFTF*MMLSNS
Trigger: TGAGTTTGACAGCATCATTCAGAAAGTGAAGTGGCA...AATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCTGCCTTGTTAGTATCTaGTATGAAGACAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: QQLCHQYTWADVSESSHSCLVSI*YEDRKA
Trigger: GGCTTTTCTGTCTTCATATCAGATACTAACAAGGCA...GGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp ACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGGAGACAACTCTCAATaGCTAAAACCAGTGTTATTG +
Preference number: 4 (lower is better)
Translates to: TALPSIHMGRCFRIQPFPGDNSQ*LKPVLL
Trigger: CAATAACACTGGTTTTAGTCATTGAGAGTTGTCTCC...TGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp ACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCACATGTAGATGTTAACTaGTATCCACACATTCGACCT +
Preference number: 4 (lower is better)
Translates to: TALPSIHMGRCFRIQPFPHVDVN*YPHIRP
Trigger: AGGTCGAATGTGTGGATATCAGTTAACATCTACATG...TGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp ATTGGGGGAATTAGCCTCAGACTTCTCCACATCTATAATCCCAGGGCTTTGGAAAAAGTCACAACCTTCTaGAGAACCTCGACCTGGATA +
Preference number: 4 (lower is better)
Translates to: IGGISLRLLHIYNPRALEKVTTF*RTSTWI
Trigger: TATCCAGGTCGAGGTTCTGCAGAAGGTTGTGACTTT...TTCCAAAGCCCTGGGATTATAGATGTGGAGAAGTCTGAGGCTAATTCCCCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445388.5
CDS-3UTR GCA 90 bp ATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCAAAATAACACTGGAAAATaGAGGCTACGAAAGGAACAA +
Preference number: 4 (lower is better)
Translates to: MDHRLRCPKHLGYRSTWQNNTGK*RLRKEQ
Trigger: TTGTTCCTTTCGTAGCCTGCATTTTCCAGTGTTATT...TTGCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTTACATGGCAACCCAATaGCACATAGGAAAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: KFDITAPGWENQSSPHLGYMATQ*HIGKEN
Trigger: GTTTTCTTTTCCTATGTGGCATTGGGTTGCCATGTA...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AGAAGAAAAACTGAATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTGAAAAGCGTATGGCCTaGAGGCTAGGCCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: RRKTEFCTCLALNSPVAVEKRMA*RLGQCR
Trigger: CCTGCATTGGCCTAGCCTCCAGGCCATACGCTTTTC...AACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAATTCAGTTTTTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445388.5
CDS-3UTR CCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCTTTCCAATTTCCTCATaGGCAACCTGTAAAGAATGT +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVFPISS*ATCKEC
Trigger: ACATTCTTTACAGGTTGCCCATGAGGAAATTGGAAA...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp ATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCAATTTCCAATTTCCTCATaGGCAACCTGTAAAGAATGT +
Preference number: 4 (lower is better)
Translates to: MDHRLRCPKHLGYRSTWQFPISS*ATCKEC
Trigger: ACATTCTTTACAGGTTGCCCATGAGGAAATTGGAAA...TTGCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCAGCACAGAACCAAGGCTaGGTATCAAGCAACCTCATG +
Preference number: 4 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPAQNQG*VSSNLM
Trigger: CATGAGGTTGCTTGATACCCAGCCTTGGTTCTGTGC...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCTTTAAAGTGGTTCCTTaGAGACAACTCTCAATGACT +
Preference number: 4 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVFKVVP*RQLSMT
Trigger: AGTCATTGAGAGTTGTCTCCAAGGAACCACTTTAAA...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AAGAGGCAGGAGAGTTGGAGAACAAGAGCACCTAGAAAAGAACAGAGGAGCTCATTGGAACCAGTTTGCTaGTATCAAGGATCACACAAG +
Preference number: 4 (lower is better)
Translates to: KRQESWRTRAPRKEQRSSLEPVC*YQGSHK
Trigger: CTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAA...TGAGCTCCTCTGTTCTTTTCTAGGTGCTCTTGTTCTCCAACTCTCCTGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATTGGGTCAGGGGTGGCTaGCTCACGAGGTTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHWVRGG*LTRFGP
Trigger: TGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCA...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACCATTTGGGTCAGGGGTaGCTGGCTCACGAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYHLGQG*LAHEVW
Trigger: CCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATG...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp AGAAGAAAAACTGAATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTGCAAGGCTAAACTCTTaGGCCGTCTCCTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: RRKTEFCTCLALNSPVAVARLNS*AVSSIP
Trigger: TGGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGC...AACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAATTCAGTTTTTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR TCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGACTTCACTTTCTGAATaGTGCTGTCAAACTCAAGAA +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLTSLSE*CCQTQE
Trigger: TTCTTGAGTTTGACAGCATCATTCAGAAAGTGAAGT...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGCCAGCAGCAGAAGTTTaGCATCACTGCTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMPAAEV*HHCSRM
Trigger: CATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGG...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACCCAGCAGCAGAAGTTTaGCATCACTGCTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYPAAEV*HHCSRM
Trigger: CATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGG...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp AAAACTGAATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGCTGCAGTTCGACCTATTCCTaGGACTGTCTTTCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: KTEFCTCLALNSPVAVCCSSTYS*DCLSSA
Trigger: AGCGGAAGAAAGACAGTCTCAGGAATAGGTCGAACT...GCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAATTCAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR TCA 90 bp AATTTTACCCTAAATAAAAGGCGCTTGTGGGCAACAGCTCTGCCATCAATACACAGTTCGACCTATTCCTaGGACTGTCTTTCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: NFTLNKRRLWATALPSIHSSTYS*DCLSSA
Trigger: AGCGGAAGAAAGACAGTCTCAGGAATAGGTCGAACT...GTGTATTGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAGGGTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR GCA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCACCCAAAATGACCTCCTaGGTGGTACAAAACAAGCCA +
Preference number: 4 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPPKMTS*VVQNKP
Trigger: TGGCTTGTTTTGTACCACGCAGGAGGTCATTTTGGG...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACTGCAGAACCTCGACCTaGATACTGGGCCAGTCGCAA +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYCRTST*ILGQSQ
Trigger: TTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCA...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACATGGCTGCTGGACACTaGCAGGAGCAGATAGCCATG +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYMAAGH*QEQIAM
Trigger: CATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCCAT...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGTTTCCAATTTCCTCATaGGCAACCTGTAAAGAATGT +
Preference number: 4 (lower is better)
Translates to: QKFDITAPGWENQSSPHLFPISS*ATCKEC
Trigger: ACATTCTTTACAGGTTGCCCATGAGGAAATTGGAAA...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGAAACCTTTTGGGCTCTaGCCCCGTGGTTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMKPFGL*PRGWET
Trigger: GGTTTCCCAACCACGGGGCCAGAGCCCAAAAGGTTT...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACGCCTTGCTGGCCTGCTaGCTATTGTCTCTGACTCTG +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYALLAC*LLSLTL
Trigger: CAGAGTCAGAGACAATAGCCAGCAGGCCAGCAAGGC...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCAGCATGTCACAATGAGTaGCCAACTCCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPACHNE*PTPSQN
Trigger: GTTCTGTGAAGGAGTTGGCCACTCATTGTGACATGC...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp AATTTTACCCTAAATAAAAGGCGCTTGTGGGCAACAGCTCTGCCATCAATACACGCATGTCACAATGAGTaGCCAACTCCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: NFTLNKRRLWATALPSIHACHNE*PTPSQN
Trigger: GTTCTGTGAAGGAGTTGGCCACTCATTGTGACATGC...GTGTATTGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAGGGTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CAA 72 bp CTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTaGCTGCAGGTATATTGTCTCTTCAGTTCGACCTAT +
Preference number: 4 (lower is better)
Translates to: LHLLGFKQSCSC*LQVYCLFSSTY
Trigger: ATAGGTCGAACTGAAGAGACAATATACCTGCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR TCA 90 bp AGAAGAAAAACTGAATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGTCATAGGAAGCTGTaGATTCCCACCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RRKTEFCTCLALNSPVAVCHRKL*IPTTGS
Trigger: AGACCCTGTGGTGGGAATTCACAGCTTCCTATGACA...AACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAATTCAGTTTTTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR TCA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCAGAATGTTCTGCAAGGTaGACTCCTCGAATGAGATTC +
Preference number: 4 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPECSAR*TPRMRF
Trigger: GAATCTCATTCGAGGAGTTCACCTTGCAGAACATTC...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGGTGCTACAACAACAGTaGGTCCATGGTGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMVLQQQ*VHGGVR
Trigger: CCTCACTCCACCATGGACTCACTGTTGTTGTAGCAC...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp AATTTTACCCTAAATAAAAGGCGCTTGTGGGCAACAGCTCTGCCATCAATACACAAAGTCACAACCTTCTaGAGAACCTCGACCTGGATA +
Preference number: 4 (lower is better)
Translates to: NFTLNKRRLWATALPSIHKVTTF*RTSTWI
Trigger: TATCCAGGTCGAGGTTCTGCAGAAGGTTGTGACTTT...GTGTATTGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAGGGTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR GCA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGGATCATAGGCTCAGATaGCCAAAGCACCTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMDHRLR*PKHLGY
Trigger: GTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATC...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp GCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCACTAGAAAAACTGAATTCTaGACTTGCTTGGCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: ADSHAGHVPERRKTEFCTRKTEF*TCLALN
Trigger: GTTTAAAGCCAAGCAAGTGCAGAATTCAGTTTTTCT...AGTGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGCTATCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR CCA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATCAGAGTGAGAACCGCTaGAGGCTGCAACTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHQSENR*RLQLEL
Trigger: GAGCTCAAGTTGCAGCCTCCAGCGGTTCTCACTCTG...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp AATTTTACCCTAAATAAAAGGCGCTTGTGGGCAACAGCTCTGCCATCAATACACAGTGAGGATAACTCCTaGGATTTGGAACCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: NFTLNKRRLWATALPSIHSEDNS*DLEPVC
Trigger: GCAAACTGGTTCCAAATCCCAGGAGTTATCCTCACT...GTGTATTGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAGGGTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATCCCTTCCTAAGAGCATaGAGCCACACTCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHPFLRA*SHTLAL
Trigger: CAAGGCCAGAGTGTGGCTCCATGCTCTTAGGAAGGG...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATCTGGCTCACGAGGTTTaGTCCAACCAGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHLAHEV*SNQQNQ
Trigger: CTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAG...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATGGTGAACTCCTCGAATaGGATTCAGGGCAGCACACA +
Preference number: 4 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHGELLE*DSGQHT
Trigger: TGTGTGCTGCCCTGAATCTCATTCGAGGAGTTCACC...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR GCA 90 bp TATGGCAGCCTTAGGGAACTAACACACTCCTTACTATTAAAAGCTATGGTACTGAAAGTCACAACCTTCTaGAGAACCTCGACCTGGATA +
Preference number: 4 (lower is better)
Translates to: YGSLRELTHSLLLKAMVLKVTTF*RTSTWI
Trigger: TATCCAGGTCGAGGTTCTGCAGAAGGTTGTGACTTT...CAGTACCATAGCTTTTAATAGTAAGGAGTGTGTTAGTTCCCTAAGGCTGCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454141.5
CDS-3UTR GCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACTGTGGGCAACAGCTCTaGCATCAATACACATGGGCA +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYCGQQL*HQYTWA
Trigger: TGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACA...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CCA 90 bp AATTTTACCCTAAATAAAAGGCGCTTGTGGGCAACAGCTCTGCCATCAATACACAAAAGATCACGGACATaGTCCACAAGAGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: NFTLNKRRLWATALPSIHKRSRT*STREVM
Trigger: CATGACTTCTCTTGTGGACCATGTCCGTGATCTTTT...GTGTATTGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAGGGTAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATCACTGCTCCCGGATaGGAGAATCAGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHITAPG*ENQSSP
Trigger: AGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGAT...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
3UTR CAA 72 bp GCAGTTGAACACTCAAAGTGTTCCATGCAACTGTGGTaGAACTATTCAGATTCCAGACTTCTACCAAGAACA +
Preference number: 4 (lower is better)
Translates to: AVEHSKCSMQLW*NYSDSRLLPRT
Trigger: TGTTCTTGGTAGAAGTCTGGAATCTGAATAGTTCAACCACAGTTGCATGGAACACTTTGAGTGTTCAACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
3UTR CAA 72 bp TCAGACTTCTCCACATCTGTGAGAGAACGAATTCTGTaGTTTGAAGCCAGTTTGTGGTCATTTGTTATGGCA +
Preference number: 4 (lower is better)
Translates to: SDFSTSVRERIL*FEASLWSFVMA
Trigger: TGCCATAACAAATGACCACAAACTGGCTTCAAACAACAGAATTCGTTCTCTCACAGATGTGGAGAAGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454141.5
CDS-3UTR TCA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATCATGGGTGGGAGAGTTaGACCTCAATGCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHHGWES*TSMQSA
Trigger: AGCAGATTGCATTGAGGTTCAACTCTCCCACCCATG...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp GGGATGCATATTCTATTGGGGGAATTAGCCTCAGACTTCTCCACATCTATAATCAGTAGTCTTAATCAATaGCAGCCTGTGATCACTCTT +
Preference number: 4 (lower is better)
Translates to: GMHILLGELASDFSTSIISSLNQ*QPVITL
Trigger: AAGAGTGATCACAGGCTGTCATTGATTAAGACTACT...GATTATAGATGTGGAGAAGTCTGAGGCTAATTCCCCCAATAGAATATGCATCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445388.5
CDS-3UTR TCA 90 bp TGCTGCAGGTATATTGTCTCTTCAGTTCGACCTATTCCTGAGACTGTCTTTCTTAGTAGTCTTAATCAATaGCAGCCTGTGATCACTCTT +
Preference number: 4 (lower is better)
Translates to: CCRYIVSSVRPIPETVFLSSLNQ*QPVITL
Trigger: AAGAGTGATCACAGGCTGTCATTGATTAAGACTACT...AAGAAAGACAGTCTCAGGAATAGGTCGAACTGAAGAGACAATATACCTGCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR GCA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCATTCACCTGCTGGGTATaGAGAAAATTATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPFTCWV*RKLCRC
Trigger: ACATCTGCATAATTTTCTGCATACCCAGCAGGTGAA...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp TGCTGCAGGTATATTGTCTCTTCAGTTCGACCTATTCCTGAGACTGTCTTTCTTTTCATGCATGAGGGATaGATATTCTATTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: CCRYIVSSVRPIPETVFLFMHEG*IFYWGN
Trigger: ATTCCCCCAATAGAATATGCATCCCTCATGCATGAA...AAGAAAGACAGTCTCAGGAATAGGTCGAACTGAAGAGACAATATACCTGCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR CCA 90 bp AATTTTACCCTAAATAAAAGGCGCTTGTGGGCAACAGCTCTGCCATCAATACACATGAGCCATCATGCCTaGCCCATATCCAAATATTTT +
Preference number: 4 (lower is better)
Translates to: NFTLNKRRLWATALPSIHMSHHA*PISKYF
Trigger: AAAATATTTGGATATGGGCCAGGCATGATGGCTCAT...GTGTATTGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAGGGTAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACAAGAGGCAGGAGAGTTaGAGAACAAGAGCACCTAGA +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYKRQES*RTRAPR
Trigger: TCTAGGTGCTCTTGTTCTCCAACTCTCCTGCCTCTT...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACCAGCTCCTTGGATCCTaGAAAATGCAGGCTACGAAA +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYQLLGS*KMQATK
Trigger: TTTCGTAGCCTGCATTTTCCAGGATCCAAGGAGCTG...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273156.11
ENST00000417572.5
ENST00000449617.5
CDS-3UTR GCA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATTCATCACCCCATTTaGCACATCTGTGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHIHHPI*HICVLQ
Trigger: CTGGAGGACACAGATGTGGCAAATGGGGTGATGAAT...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR GCA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATCCCAAAATGACCTCCTaGGTGGTACAAAACAAGCCA +
Preference number: 4 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHPKMTS*VVQNKP
Trigger: TGGCTTGTTTTGTACCACGCAGGAGGTCATTTTGGG...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATGGGATTACAGGCATGTaGCATCACATCCGGCTAATT +
Preference number: 4 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHGITGM*HHIRLI
Trigger: AATTAGCCGGATGTGATGGCACATGCCTGTAATCCC...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR GCA 90 bp GTGAGAGAACGAATTCTGTTGTTTGAAGCCAGTTTGTGGTCATTTGTTATGGCATTCATGCATGAGGGATaGATATTCTATTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: VRERILLFEASLWSFVMAFMHEG*IFYWGN
Trigger: ATTCCCCCAATAGAATATGCATCCCTCATGCATGAA...TGCCATAACAAATGACCACAAACTGGCTTCAAACAACAGAATTCGTTCTCTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454141.5
CDS-3UTR GCA 90 bp AGAAAAACTGAATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGCACTGAATTCTGCACTTaGTTGGCTTTAAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: RKTEFCTCLALNSPVAVCTEFCT*LALNSP
Trigger: AGGACTGTTTAAAGCCAAGCAAGTGCAGAATTCAGT...GCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAATTCAGTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR CCA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATAATAAAAGGCGCTTGTaGGCAACAGCTCTGCCATCA +
Preference number: 4 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHNKRRL*ATALPS
Trigger: TGATGGCAGAGCTGTTGCCCACAAGCGCCTTTTATT...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTGCCACTTCACTTTCTaGATGATGCTGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMCHFTF*MMLSNS
Trigger: TGAGTTTGACAGCATCATTCAGAAAGTGAAGTGGCA...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR TCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACTTCTTTACTGCCTGCTaGATATGGATCATAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYFFTAC*IWIIGS
Trigger: TGAGCCTATGATCCATATTCAGCAGGCAGTAAAGAA...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp AGAAGAAAAACTGAATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTACGAATTCTGTTGTTTaGAGCCAGTTTGTGGTCATT +
Preference number: 4 (lower is better)
Translates to: RRKTEFCTCLALNSPVAVTNSVV*SQFVVI
Trigger: AATGACCACAAACTGGCTTCAAACAACAGAATTCGT...AACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAATTCAGTTTTTCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454141.5
CDS-3UTR GCA 90 bp ACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGCTGCAGGTATATTGTCTCTAGAAAAACTGAATTCTaGACTTGCTTGGCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: TCLALNSPVAVCCRYIVSRKTEF*TCLALN
Trigger: GTTTAAAGCCAAGCAAGTGCAGAATTCAGTTTTTCT...AGAGACAATATACCTGCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR CCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACAAAAGATCACGGACATaGTCCACAAGAGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYKRSRT*STREVM
Trigger: CATGACTTCTCTTGTGGACCATGTCCGTGATCTTTT...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CCA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCAATTTGGATTTTAAAGTaGTTCCTTGGAGACAACTCT +
Preference number: 4 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPIWILK*FLGDNS
Trigger: AGAGTTGTCTCCAAGGAACCACTTTAAAATCCAAAT...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGACCTACTCCAGGTTGTaGTCAATTGTAAGTAATCCT +
Preference number: 4 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMTYSRL*SIVSNP
Trigger: AGGATTACTTACAATTGACCACAACCTGGAGTAGGT...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CCA 90 bp CTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGTACACCTACTCCAGGTTGTaGTCAATTGTAAGTAATCCT +
Preference number: 4 (lower is better)
Translates to: LLKQPQNHINVRVKGHMYTYSRL*SIVSNP
Trigger: AGGATTACTTACAATTGACCACAACCTGGAGTAGGT...GTACATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR TCA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATACTTCACTTTCTGAATaGTGCTGTCAAACTCAAGAA +
Preference number: 4 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHTSLSE*CCQTQE
Trigger: TTCTTGAGTTTGACAGCATCATTCAGAAAGTGAAGT...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS GCA 90 bp CATGAGGACACCTCGCCCGGACGGCGGCCTTCGGAAGTCGGCGCCTaGCAGCTACCCGCCGCCTCCTCAGCAATCTTAGCCGACCGGGAG +
Preference number: 5 (lower is better)
Translates to: HEDTSPGRRPSEVGA*QLPAASSAILADRE
Trigger: CTCCCGGTCGGCTAAGATTGCTGAGGAGGCGGCGGGTAGCTGGCAGGCGCCGACTTCCGAAGGCCGCCGTCCGGGCGAGGTGTCCTCATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000383750.8
ENST00000423701.6
ENST00000445388.5
ENST00000449617.5
ENST00000454141.5
CDS GCA 90 bp GCTCCAAGTTGCTCGCCCGGACGGCGGCCTTCGGAAGTCGGCGCCTaGCAGCTACCCGCCGCCTCCTCAGCAATCTTAGCCGACCGGGAG +
Preference number: 5 (lower is better)
Translates to: APSCSPGRRPSEVGA*QLPAASSAILADRE
Trigger: CTCCCGGTCGGCTAAGATTGCTGAGGAGGCGGCGGGTAGCTGGCAGGCGCCGACTTCCGAAGGCCGCCGTCCGGGCGAGCAACTTGGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416880.5
CDS GCA 90 bp CTTGCCGCCACCTCGGTCGCGATGGGGGCGCAGGACCGGCCGCAGTaGCACTTCGACATCGAGATCAACCGGGAGCCGGGTGAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LAATSVAMGAQDRPQ*HFDIEINREPGELE
Trigger: TTCCAGCTCACCCGGCTCCCGGTTGATCTCGATGTCGAAGTGGCACTGCGGCCGGTCCTGCGCCCCCATCGCGACCGAGGTGGCGGCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417572.5
CDS GCA 90 bp AAAGTGAGACCCTCGCCCGGACGGCGGCCTTCGGAAGTCGGCGCCTaGCAGCTACCCGCCGCCTCCTCAGCAATCTTAGCCGACCGGGAG +
Preference number: 5 (lower is better)
Translates to: KVRPSPGRRPSEVGA*QLPAASSAILADRE
Trigger: CTCCCGGTCGGCTAAGATTGCTGAGGAGGCGGCGGGTAGCTGGCAGGCGCCGACTTCCGAAGGCCGCCGTCCGGGCGAGGGTCTCACTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456222.1
CDS-3UTR CAA 90 bp GGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTCGCAAGGCTAAACTCTaGAGCCGTCTCCTCCATTCC +
Preference number: 5 (lower is better)
Translates to: GSGVAGSRGLVQPAEPAPRKAKL*SRLLHS
Trigger: GGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGCG...AGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000449617.5
CDS-3UTR CAA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGCGCGTGCGCGAGTCTaGAGCCACCCCACCTCCCCC +
Preference number: 5 (lower is better)
Translates to: QKFDITAPGWENQSSPHLARARV*SHPTSP
Trigger: GGGGGAGGTGGGGTGGCTCAAGACTCGCGCACGCGC...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273156.11
CDS TCA 90 bp GAAATCGAGACCATCCTGGCTAACACAGTGGAACCCCGTCTCTACTaGCGAGATGGAGGGCGCAGGCGCATCCACGGCTTTCAGATTGGG +
Preference number: 5 (lower is better)
Translates to: EIETILANTVEPRLY*RDGGRRRIHGFQIG
Trigger: CCCAATCTGAAAGCCGTGGATGCGCCTGCGCCCTCCATCTCGTCAGTAGAGACGGGGTTCCACTGTGTTAGCCAGGATGGTCTCGATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450981.5
CDS-3UTR CAA 90 bp GGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTCTGATGCTCAAGGCCTaGCAGCATCTGATACCAGAA +
Preference number: 5 (lower is better)
Translates to: GSGVAGSRGLVQPAEPAPLMLKA*QHLIPE
Trigger: TTCTGGTATCAGATGCTGCAAGGCCTTGAGCATCAG...AGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp GCTGGCTCACGAGGTTTGGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGGAAACTCCTCTCCAAGACTaGACTCCCAGGCATGGGTGG +
Preference number: 5 (lower is better)
Translates to: AGSRGLVQPAEPAPWILETPLQD*TPRHGW
Trigger: CCACCCATGCCTGGGAGTCAAGTCTTGGAGAGGAGT...TTCCAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CTTGTGGGCAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCACCTCTCTCCCAGCTCTaGCCGCCACCTCGGTCGCGA +
Preference number: 5 (lower is better)
Translates to: LVGNSSAINTHGQMFPNPPLSQL*PPPRSR
Trigger: TCGCGACCGAGGTGGCGGCAAGAGCTGGGAGAGAGG...TGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417572.5
CDS TCA 90 bp TCCAAGCCTGTAATTCTCACGTCCGGAGGTGAGAAGGAGCCTTCGTaGTCTAAGCTCGATTCCTGCCGGGGTAGCAACCGGACTGACGTC +
Preference number: 5 (lower is better)
Translates to: SKPVILTSGGEKEPS*SKLDSCRGSNRTDV
Trigger: GACGTCAGTCCGGTTGCTACCCCGGCAGGAATCGAGCTTAGATCACGAAGGCTCCTTCTCACCTCCGGACGTGAGAATTACAGGCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456515.5
CDS-3UTR CAA 90 bp ACCCCATTTGCCACATCTGTGTCCTCCAGAGTGAGAACCGCTGGAGGCTGCAACCGCAAGGCTAAACTCTaGAGCCGTCTCCTCCATTCC +
Preference number: 5 (lower is better)
Translates to: TPFATSVSSRVRTAGGCNRKAKL*SRLLHS
Trigger: GGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGCG...GTTGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAGATGTGGCAAATGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000449617.5
CDS-3UTR CAA 90 bp CTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCATTCATCACCCCATTaGCCACATCTGTGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: LLPDGRIRALLIWVRGGWHSSPH*PHLCPP
Trigger: TGGAGGACACAGATGTGGCAAATGGGGTGATGAATG...CCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp CTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGCAGAGCTCTCCTCATTaGGGTCAGGGGTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LMRFPQQQKFDITAPGWEQSSPH*GQGWLA
Trigger: AGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTG...CTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp CTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCCTAAATAAAAGGCGCTaGTGGGCAACAGCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: LPDGRIRALLIWVRGGWLLNKRR*WATALP
Trigger: TGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAG...GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264454.8
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp GGCTGCTGGACACTGGCAGGAGCAGATAGCCATGCAGGCCACGTCCCCGAAAGAGGGATGCATATTCTATaGGGGGAATTAGCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: GCWTLAGADSHAGHVPERGMHIL*GELASD
Trigger: GTCTGAGGCTAATTCCCCCAATAGAATATGCATCCC...TCTTTCGGGGACGTGGCCTGCATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS GCA 90 bp ACCAGGCTCCAAGTGCATCGGTGTGTGACCATTCATCACCCCATTTaGCACATCTGTGTCCTCCAGAGTGAGAACCGCTGGAGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: TRLQVHRCVTIHHPI*HICVLQSENRWRLQ
Trigger: TTGCAGCCTCCAGCGGTTCTCACTCTGGAGGACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTGGAGCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493107.5
CDS-3UTR CAA 90 bp CTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCACTGATGCTCAAGGCCTaGCAGCATCTGATACCAGAA +
Preference number: 5 (lower is better)
Translates to: LSSFGSGVAGSRGLVQPALMLKA*QHLIPE
Trigger: TTCTGGTATCAGATGCTGCAAGGCCTTGAGCATCAG...TGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTGGAAGGGGAAACCTTTaGGGCTCTGGCCCCGTGGTT +
Preference number: 5 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPGRGNL*GSGPVV
Trigger: AACCACGGGGCCAGAGCCCAAAAGGTTTCCCCTTCC...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCACTCCTCTCCAAGACTaGACTCCCAGGCATGGGTGG +
Preference number: 5 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLTPLQD*TPRHGW
Trigger: CCACCCATGCCTGGGAGTCAAGTCTTGGAGAGGAGT...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTCAGAGCTCTCCTCATTaGGGTCAGGGGTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPQSSPH*GQGWLA
Trigger: AGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTG...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGCAGAGCTCTCCTCATTaGGGTCAGGGGTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: QLCHQYTWADVSESSHSQQSSPH*GQGWLA
Trigger: AGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTG...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp GCTCCAAGTGCATCGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTGTCAGAGCTCTCCTCATTaGGGTCAGGGGTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: APSASVCDHSSPHLPHLCQSSPH*GQGWLA
Trigger: AGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTG...ACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS CCA 90 bp CAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTaGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGTAAAGAATGT +
Preference number: 5 (lower is better)
Translates to: QSSPHLGQGWLAHEV*SNQQNQLLGSCKEC
Trigger: ACATTCTTTACAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423701.6
CDS-3UTR CAA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCCGCAAGGCTAAACTCTaGAGCCGTCTCCTCCATTCC +
Preference number: 5 (lower is better)
Translates to: FPQQQKFDITAPGWENQSRKAKL*SRLLHS
Trigger: GGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGCG...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CAA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTGGAAGGGGAAACCTTTaGGGCTCTGGCCCCGTGGTT +
Preference number: 5 (lower is better)
Translates to: KFDITAPGWENQSSPHLGGRGNL*GSGPVV
Trigger: AACCACGGGGCCAGAGCCCAAAAGGTTTCCCCTTCC...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGCCTGCCTGTCCTCACTaGTGCTGCACTATGCAAGCA +
Preference number: 5 (lower is better)
Translates to: LMRFPQQQKFDITAPGWEPACPH*CCTMQA
Trigger: TGCTTGCATAGTGCAGCACAAGTGAGGACAGGCAGG...CTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp TTCACTGACATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGTGTCTGAACAGGGGCTaGCCAGGCACATCTGATCAC +
Preference number: 5 (lower is better)
Translates to: FTDMPFSTGSLLMRFPQQCLNRG*PGTSDH
Trigger: GTGATCAGATGTGCCTGGCAAGCCCCTGTTCAGACA...CTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCATGTCAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCTGTCTGAACAGGGGCTaGCCAGGCACATCTGATCAC +
Preference number: 5 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLCLNRG*PGTSDH
Trigger: GTGATCAGATGTGCCTGGCAAGCCCCTGTTCAGACA...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCCACTACCACTTTaGACCCTCATAACAGCACCC +
Preference number: 5 (lower is better)
Translates to: PQQQKFDITAPGWENQSSPPLPL*TLITAP
Trigger: GGGTGCTGTTATGAGGGTCAAAAGTGGTAGTGGAGG...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCGCTGGCTCACGAGGTTaGGTCCAACCAGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVAGSRG*VQPAEP
Trigger: TGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp AGTGCATCGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTGTCCTCCAGCTGGCTCACGAGGTTaGGTCCAACCAGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: SASVCDHSSPHLPHLCPPAGSRG*VQPAEP
Trigger: TGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC...TGGAGGACACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR CAA 90 bp AACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCCAGAGCTCTCCTCATTaGGGTCAGGGGTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: NSSAINTHGQMFPNPAIPQSSPH*GQGWLA
Trigger: AGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTG...GGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCCCCAGCAGCAGAAGTTaGACATCACTGCTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLPSSRS*TSLLPD
Trigger: ATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGG...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTTATGTGGAAAAGGATTaGCCAGAGGTTCCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: PQQQKFDITAPGWENQSSYVEKD*PEVPQP
Trigger: GGGCTGAGGAACCTCTGGCAAATCCTTTTCCACATA...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCTCTCCTGAAGCTGCCTaGTTAGTATCTGATATGAAG +
Preference number: 5 (lower is better)
Translates to: LPDGRIRALLIWVRGGWLSPEAA*LVSDMK
Trigger: CTTCATATCAGATACTAACAAGGCAGCTTCAGGAGA...GAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCACCGAGTCTCCTGCTTaGGCCTTCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: QQLCHQYTWADVSESSHSTESPA*AFQSAG
Trigger: CCCAGCACTTTGGAAGGCCAAAGCAGGAGACTCGGT...GGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp GGCCAACTCCTTCACAGAACAGCAAATAGCAGCCCTGGCTACAAGGTGCAGTGTCCTCCACTACCACTTTaGACCCTCATAACAGCACCC +
Preference number: 5 (lower is better)
Translates to: GQLLHRTANSSPGYKVQCPPLPL*TLITAP
Trigger: GGGTGCTGTTATGAGGGTCAAAAGTGGTAGTGGAGG...ACACTGCACCTTGTAGCCAGGGCTGCTATTTGCTGTTCTGTGAAGGAGTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATGCTGGCTCACGAGGTTaGGTCCAACCAGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDAGSRG*VQPAEP
Trigger: TGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp CTTGTGGGCAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCTGGCTCACGAGGTTaGGTCCAACCAGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: LVGNSSAINTHGQMFPNPAGSRG*VQPAEP
Trigger: TGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC...TGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp GGAGATCCTGCAGTAATGCTTGGCACAGAACCAAGGCTGGGTATCAAGCAACCTCCCAGCAGCAGAAGTTaGACATCACTGCTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: GDPAVMLGTEPRLGIKQPPSSRS*TSLLPD
Trigger: ATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGG...AGGTTGCTTGATACCCAGCCTTGGTTCTGTGCCAAGCATTACTGCAGGATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTCCCAGCAGCAGAAGTTaGACATCACTGCTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFPSSRS*TSLLPD
Trigger: ATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGG...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp GGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCCTAAATAAAAGGCGCTaGTGGGCAACAGCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: GSLLMRFPQQQKFDITAPLNKRR*WATALP
Trigger: TGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAG...GGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp TTCACTGACATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGAGCAGAACCAGCTCCTaGGATCCTGGAAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: FTDMPFSTGSLLMRFPQQSRTSS*DPGKCR
Trigger: CCTGCATTTTCCAGGATCCAAGGAGCTGGTTCTGCT...CTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCATGTCAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273156.11
ENST00000417572.5
ENST00000449617.5
CDS-3UTR CAA 90 bp AACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCCGCAAGGCTAAACTCTaGAGCCGTCTCCTCCATTCC +
Preference number: 5 (lower is better)
Translates to: NSSAINTHGQMFPNPAIPRKAKL*SRLLHS
Trigger: GGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGCG...GGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CAA 90 bp TTCACTGACATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCATTCATCACCCCATTaGCCACATCTGTGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: FTDMPFSTGSLLMRFPQQHSSPH*PHLCPP
Trigger: TGGAGGACACAGATGTGGCAAATGGGGTGATGAATG...CTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCATGTCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCCATTCATCACCCCATTaGCCACATCTGTGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLHSSPH*PHLCPP
Trigger: TGGAGGACACAGATGTGGCAAATGGGGTGATGAATG...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp ATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCAACCGTGCAGGTACATGTaGCCCAGGCAAATAAAGAGC +
Preference number: 5 (lower is better)
Translates to: MDHRLRCPKHLGYRSTWQPCRYM*PRQIKS
Trigger: GCTCTTTATTTGCCTGGGCAACATGTACCTGCACGG...TTGCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTATGTGGAAAAGGATTaGCCAGAGGTTCCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: FPQQQKFDITAPGWENQSYVEKD*PEVPQP
Trigger: GGGCTGAGGAACCTCTGGCAAATCCTTTTCCACATA...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATAGACGGAGTCTTGCTTaGTCACCAGGCTGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDRRSLA*SPGWSA
Trigger: TGCACTCCAGCCTGGTGACAAAGCAAGACTCCGTCT...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCCCAGCAGCAGAAGTTaGACATCACTGCTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: KFDITAPGWENQSSPHLGPSSRS*TSLLPD
Trigger: ATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGG...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS CCA 90 bp TGTATACTAAAGTCACAACCTTCTGCAGAACCTCGACCTGGATACTaGGCCAGTCGCAAGGCTAAACTCTTGAGCCGTCTCCTCCATTCC +
Preference number: 5 (lower is better)
Translates to: CILKSQPSAEPRPGY*ASRKAKLLSRLLHS
Trigger: GGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCAGAAGGTTGTGACTTTAGTATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000383750.8
ENST00000416880.5
ENST00000417572.5
ENST00000420163.1
ENST00000423701.6
ENST00000445388.5
ENST00000449617.5
ENST00000450981.5
ENST00000454141.5
ENST00000456222.1
ENST00000456515.5
ENST00000493107.5
CDS-3UTR CAA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGCCGTGCAGGTACATGTaGCCCAGGCAAATAAAGAGC +
Preference number: 5 (lower is better)
Translates to: QKFDITAPGWENQSSPHLPCRYM*PRQIKS
Trigger: GCTCTTTATTTGCCTGGGCAACATGTACCTGCACGG...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATTAGACGGAGTCTTGCTTaGTCACCAGGCTGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: LCHQYTWADVSESSHSQIRRSLA*SPGWSA
Trigger: TGCACTCCAGCCTGGTGACAAAGCAAGACTCCGTCT...AATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp AAGAGGCAGGAGAGTTGGAGAACAAGAGCACCTAGAAAAGAACAGAGGAGCTCACTGGCCTGCTGGCTATaGTCTCTGACTCTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: KRQESWRTRAPRKEQRSSLACWL*SLTLSC
Trigger: ACAGCTCAGAGTCAGAGACAATAGCCAGCAGGCCAG...TGAGCTCCTCTGTTCTTTTCTAGGTGCTCTTGTTCTCCAACTCTCCTGCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTGGTCCAACCAGCATCTACACGAAAACATTaGGAATGTGAGCAATGTCTG +
Preference number: 5 (lower is better)
Translates to: LSSFGSGVAGSRGLVQPASTRKH*ECEQCL
Trigger: CAGACATTGCTCACATTCCAAATGTTTTCGTGTAGA...TGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp AGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCAGCAGAACCAGCTCCTaGGATCCTGGAATAAACCAA +
Preference number: 5 (lower is better)
Translates to: SSRSLTSLLPDGRIRALLSRTSS*DPGINQ
Trigger: TTGGTTTATTCCAGGATCCAAGGAGCTGGTTCTGCT...GAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATCTAAATAAAAGGCGCTaGTGGGCAACAGCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: QQKFDITAPGWENQSSPHLNKRR*WATALP
Trigger: TGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAG...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTCTAAATAAAAGGCGCTaGTGGGCAACAGCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFLNKRR*WATALP
Trigger: TGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAG...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp ACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAAGCAGAACCAGCTCCTaGGATCCTGGAAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: TALPSIHMGRCFRIQPFPSRTSS*DPGKCR
Trigger: CCTGCATTTTCCAGGATCCAAGGAGCTGGTTCTGCT...TGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273156.11
ENST00000417572.5
ENST00000449617.5
CDS-3UTR CAA 90 bp AATGCAGGTAGTGTCATAGGAAGCTGTGAATTCCCACCACAGGGTCTCCAGGAACATTCATCACCCCATTaGCCACATCTGTGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: NAGSVIGSCEFPPQGLQEHSSPH*PHLCPP
Trigger: TGGAGGACACAGATGTGGCAAATGGGGTGATGAATG...TTCCTGGAGACCCTGTGGTGGGAATTCACAGCTTCCTATGACACTACCTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383750.8
CDS-3UTR CAA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATCATTCATCACCCCATTaGCCACATCTGTGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDHSSPH*PHLCPP
Trigger: TGGAGGACACAGATGTGGCAAATGGGGTGATGAATG...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp AACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCCATTCATCACCCCATTaGCCACATCTGTGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: NSSAINTHGQMFPNPAIPHSSPH*PHLCPP
Trigger: TGGAGGACACAGATGTGGCAAATGGGGTGATGAATG...GGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCGATAACTCCTGGGATTaGGAACCAGTTTGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: FPQQQKFDITAPGWENQSDNSWD*EPVCWY
Trigger: ATACCAGCAAACTGGTTCCAAATCCCAGGAGTTATC...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp AGAACCAGCTCCTTGGATCCTGGAATAAACCAAACATCAATGGTACCATGCGCTCTGGCCTGCTGGCTATaGTCTCTGACTCTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: RTSSLDPGINQTSMVPCALACWL*SLTLSC
Trigger: ACAGCTCAGAGTCAGAGACAATAGCCAGCAGGCCAG...AGCGCATGGTACCATTGATGTTTGGTTTATTCCAGGATCCAAGGAGCTGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATCTAAATAAAAGGCGCTaGTGGGCAACAGCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDLNKRR*WATALP
Trigger: TGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAG...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp TGGGAGAATCAGAGCTCTCCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTAAAACCGTAAGAAGCTaGTGTAACATGAACAGCAAG +
Preference number: 5 (lower is better)
Translates to: WENQSSPHLGQGWLAHEVKTVRS*CNMNSK
Trigger: CTTGCTGTTCATGTTACACAAGCTTCTTACGGTTTT...AACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTGATTCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGCAGTCCTGTAGCTGTTaGCTGCAGGTATATTGTCTC +
Preference number: 5 (lower is better)
Translates to: QLCHQYTWADVSESSHSQQSCSC*LQVYCL
Trigger: GAGACAATATACCTGCAGCAAACAGCTACAGGACTG...CTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR CAA 90 bp TTTCCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCGACCACATAATGCAGTaGAACACTCAAAGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: FPQQQKFDITAPGWENQSDHIMQ*NTQSVP
Trigger: TGGAACACTTTGAGTGTTCAACTGCATTATGTGGTC...GCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATGATAACTCCTGGGATTaGGAACCAGTTTGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: QQKFDITAPGWENQSSPHDNSWD*EPVCWY
Trigger: ATACCAGCAAACTGGTTCCAAATCCCAGGAGTTATC...ATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCAGCTGGCTCACGAGGTTaGGTCCAACCAGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPAGSRG*VQPAEP
Trigger: TGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTAAAACCGTAAGAAGCTaGTGTAACATGAACAGCAAG +
Preference number: 5 (lower is better)
Translates to: PQQQKFDITAPGWENQSSKTVRS*CNMNSK
Trigger: CTTGCTGTTCATGTTACACAAGCTTCTTACGGTTTT...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000451653.5
CDS-3UTR CAA 90 bp AGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCACTTGCTTGGGGATGCATATTCTATaGGGGGAATTAGCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: SHAGHVPERRKTEFCTCLGMHIL*GELASD
Trigger: GTCTGAGGCTAATTCCCCCAATAGAATATGCATCCC...CAAGCAAGTGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR CAA 90 bp AGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTCTCCATGCAACTGTGGTaGAACTATTCAGATTCCAGA +
Preference number: 5 (lower is better)
Translates to: SLTSLLPDGRIRALLIWVSMQLW*NYSDSR
Trigger: TCTGGAATCTGAATAGTTCAACCACAGTTGCATGGA...GACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CCCCAGCAGCAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTACCATCTCTTCAAAATaGTCTCCCAGAAAAACTGAA +
Preference number: 5 (lower is better)
Translates to: PQQQKFDITAPGWENQSSTISSK*SPRKTE
Trigger: TTCAGTTTTTCTGGGAGACAATTTTGAAGAGATGGT...AGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTGCTGCTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp ATTTGGAACCAGTTTGCTGGTATCAAGGATCACACAAGAGGCTATAAACCTCCACCTGCCTGTCCTCACTaGTGCTGCACTATGCAAGCA +
Preference number: 5 (lower is better)
Translates to: IWNQFAGIKDHTRGYKPPPACPH*CCTMQA
Trigger: TGCTTGCATAGTGCAGCACAAGTGAGGACAGGCAGG...TGGAGGTTTATAGCCTCTTGTGTGATCCTTGATACCAGCAAACTGGTTCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp AGGCTCCAAGTGCATCGGTGTGTGACCATTCATCACCCCATTTGCCACATCTGTTGGCAAGACCTTGTCTaGTATACTAAAGTCACAACC +
Preference number: 5 (lower is better)
Translates to: RLQVHRCVTIHHPICHICWQDLV*YTKVTT
Trigger: GGTTGTGACTTTAGTATACAAGACAAGGTCTTGCCA...ACAGATGTGGCAAATGGGGTGATGAATGGTCACACACCGATGCACTTGGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383750.8
CDS-3UTR CAA 90 bp GCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCACTTGCTTGGTGGCAAGACCTTGTCTaGTATACTAAAGTCACAACC +
Preference number: 5 (lower is better)
Translates to: AMQATSPKEEKLNSALAWWQDLV*YTKVTT
Trigger: GGTTGTGACTTTAGTATACAAGACAAGGTCTTGCCA...CCAAGCAAGTGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445388.5
CDS-3UTR CAA 90 bp CAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCAGCAGAACCAGCTCCTaGGATCCTGTAAAGAATGTT +
Preference number: 5 (lower is better)
Translates to: QQLCHQYTWADVSESSHSSRTSS*DPVKNV
Trigger: AACATTCTTTACAGGATCCAAGGAGCTGGTTCTGCT...GGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423701.6
CDS-3UTR CAA 90 bp GGCCAACTCCTTCACAGAACAGCAAATAGCAGCCCTGGCTACAAGGTGCAGTGTAGACTGAAAGCTGATTaGGATTTTAAAGTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: GQLLHRTANSSPGYKVQCRLKAD*DFKVVP
Trigger: AGGAACCACTTTAAAATCCAAATCAGCTTTCAGTCT...ACACTGCACCTTGTAGCCAGGGCTGCTATTTGCTGTTCTGTGAAGGAGTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCTCCATGCAACTGTGGTaGAACTATTCAGATTCCAGA +
Preference number: 5 (lower is better)
Translates to: QQLCHQYTWADVSESSHSSMQLW*NYSDSR
Trigger: TCTGGAATCTGAATAGTTCAACCACAGTTGCATGGA...GGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATGACCACATAATGCAGTaGAACACTCAAAGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDDHIMQ*NTQSVP
Trigger: TGGAACACTTTGAGTGTTCAACTGCATTATGTGGTC...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp TTCACTGACATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGAGTGTAGAGACAACTTaGGAGTTTATGTCTGAGTAT +
Preference number: 5 (lower is better)
Translates to: FTDMPFSTGSLLMRFPQQSVETT*EFMSEY
Trigger: ATACTCAGACATAAACTCCAAAGTTGTCTCTACACT...CTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCATGTCAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp ATGCCCTTTTCCACAGGCTCCCTGCTGATGAGATTTCCCCAGCAGCAGAAGTTTGTCTACCCACCCCATTaGTTACAATTAAAGATGGTT +
Preference number: 5 (lower is better)
Translates to: MPFSTGSLLMRFPQQQKFVYPPH*LQLKMV
Trigger: AACCATCTTTAATTGTAACAAATGGGGTGGGTAGAC...AAACTTCTGCTGCTGGGGAAATCTCATCAGCAGGGAGCCTGTGGAAAAGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp ATGGATCATAGGCTCAGATGCCCAAAGCACCTGGGGTACAGGTCTACATGGCAAGTCTACCCACCCCATTaGTTACAATTAAAGATGGTT +
Preference number: 5 (lower is better)
Translates to: MDHRLRCPKHLGYRSTWQVYPPH*LQLKMV
Trigger: AACCATCTTTAATTGTAACAAATGGGGTGGGTAGAC...TTGCCATGTAGACCTGTACCCCAGGTGCTTTGGGCATCTGAGCCTATGATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGCAGAGCTCTCCTCATTaGGGTCAGGGGTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMQSSPH*GQGWLA
Trigger: AGCCAGCCACCCCTGACCCAAATGAGGAGAGCTCTG...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp AACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCTTTGCTGCAGGTATATaGTCTCTTCAGTTCGACCTA +
Preference number: 5 (lower is better)
Translates to: NSSAINTHGQMFPNPAIPFAAGI*SLQFDL
Trigger: TAGGTCGAACTGAAGAGACAATATACCTGCAGCAAA...GGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR CAA 90 bp GCAGATAGCCATGCAGGCCACGTCCCCGAAAGAAGAAAAACTGAATTCTGCACTTTTGCTGCAGGTATATaGTCTCTTCAGTTCGACCTA +
Preference number: 5 (lower is better)
Translates to: ADSHAGHVPERRKTEFCTFAAGI*SLQFDL
Trigger: TAGGTCGAACTGAAGAGACAATATACCTGCAGCAAA...AGTGCAGAATTCAGTTTTTCTTCTTTCGGGGACGTGGCCTGCATGGCTATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445388.5
ENST00000454141.5
CDS-3UTR CAA 90 bp CTTGTGGGCAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGAATTCTGCACTTGCTaGGCTTTAAACAGTCCTGTA +
Preference number: 5 (lower is better)
Translates to: LVGNSSAINTHGQMFPNPEFCTC*ALNSPV
Trigger: TACAGGACTGTTTAAAGCCAAGCAAGTGCAGAATTC...TGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTGCCCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS CCA 90 bp GGTTCTAGGTCACCTATCTGTGTGTCTACTGACTCCCACTCACTGTaGAATGTCTCCTCTTGTGTTTTGTCCTTTTTGCTGAGAACTCAT +
Preference number: 5 (lower is better)
Translates to: GSRSPICVSTDSHSL*NVSSCVLSFLLRTH
Trigger: ATGAGTTCTCAGCAAAAAGGACAAAACACAAGAGGAGACATTCCACAGTGAGTGGGAGTCAGTAGACACACAGATAGGTGACCTAGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487701.1
CDS-3UTR CAA 90 bp CAACAGCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCTTCACCTACTCCAGGTaGTGGTCAATTGTAAGTAAT +
Preference number: 5 (lower is better)
Translates to: QQLCHQYTWADVSESSHSFTYSR*WSIVSN
Trigger: ATTACTTACAATTGACCACAACCTGGAGTAGGTGAA...GGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTTTCACCTACTCCAGGTaGTGGTCAATTGTAAGTAAT +
Preference number: 5 (lower is better)
Translates to: KFDITAPGWENQSSPHLGFTYSR*WSIVSN
Trigger: ATTACTTACAATTGACCACAACCTGGAGTAGGTGAA...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGTCTACACGAAAACATTaGGAATGTGAGCAATGTCTG +
Preference number: 5 (lower is better)
Translates to: QKFDITAPGWENQSSPHLSTRKH*ECEQCL
Trigger: CAGACATTGCTCACATTCCAAATGTTTTCGTGTAGA...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGGCTGGCTCACGAGGTTaGGTCCAACCAGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMAGSRG*VQPAEP
Trigger: TGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGC...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp AAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGGGTAAAACCGTAAGAAGCTaGTGTAACATGAACAGCAAG +
Preference number: 5 (lower is better)
Translates to: KFDITAPGWENQSSPHLGKTVRS*CNMNSK
Trigger: CTTGCTGTTCATGTTACACAAGCTTCTTACGGTTTT...ACCCAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000451653.5
CDS-3UTR CAA 90 bp CAGAAGTTTGACATCACTGCTCCCGGATGGGAGAATCAGAGCTCTCCTCATTTGAAAACCGTAAGAAGCTaGTGTAACATGAACAGCAAG +
Preference number: 5 (lower is better)
Translates to: QKFDITAPGWENQSSPHLKTVRS*CNMNSK
Trigger: CTTGCTGTTCATGTTACACAAGCTTCTTACGGTTTT...CAAATGAGGAGAGCTCTGATTCTCCCATCCGGGAGCAGTGATGTCAAACTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000451653.5
CDS-3UTR CAA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGCGCAAGGCTAAACTCTaGAGCCGTCTCCTCCATTCC +
Preference number: 5 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMRKAKL*SRLLHS
Trigger: GGAATGGAGGAGACGGCTCAAGAGTTTAGCCTTGCG...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
CDS-3UTR CAA 90 bp GCTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATAGACTGAAAGCTGATTaGGATTTTAAAGTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: ALPSIHMGRCFRIQPFPDRLKAD*DFKVVP
Trigger: AGGAACCACTTTAAAATCCAAATCAGCTTTCAGTCT...ATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp ATGAGGGATGCATATTCTATTGGGGGAATTAGCCTCAGACTTCTCCACATCTATCAGTCCTGTAGCTGTTaGCTGCAGGTATATTGTCTC +
Preference number: 5 (lower is better)
Translates to: MRDAYSIGGISLRLLHIYQSCSC*LQVYCL
Trigger: GAGACAATATACCTGCAGCAAACAGCTACAGGACTG...ATAGATGTGGAGAAGTCTGAGGCTAATTCCCCCAATAGAATATGCATCCCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445388.5
CDS-3UTR CAA 90 bp CTCTGCCATCAATACACATGGGCAGATGTTTCCGAATCCAGCCATTCCCAGATTACCATCTCTTCAAAATaGTCTCCCAGAAAAACTGAA +
Preference number: 5 (lower is better)
Translates to: LCHQYTWADVSESSHSQITISSK*SPRKTE
Trigger: TTCAGTTTTTCTGGGAGACAATTTTGAAGAGATGGT...AATCTGGGAATGGCTGGATTCGGAAACATCTGCCCATGTGTATTGATGGCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS-3UTR CAA 90 bp GTGAGAGAACGAATTCTGTTGTTTGAAGCCAGTTTGTGGTCATTTGTTATGGCACAGTCCTGTAGCTGTTaGCTGCAGGTATATTGTCTC +
Preference number: 5 (lower is better)
Translates to: VRERILLFEASLWSFVMAQSCSC*LQVYCL
Trigger: GAGACAATATACCTGCAGCAAACAGCTACAGGACTG...TGCCATAACAAATGACCACAAACTGGCTTCAAACAACAGAATTCGTTCTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454141.5
CDS-3UTR CAA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGCATTCATCACCCCATTaGCCACATCTGTGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMHSSPH*PHLCPP
Trigger: TGGAGGACACAGATGTGGCAAATGGGGTGATGAATG...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp ATAACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATCTAAATAAAAGGCGCTaGTGGGCAACAGCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: ITLLKQPQNHINVRVKGHLNKRR*WATALP
Trigger: TGGCAGAGCTGTTGCCCACAAGCGCCTTTTATTTAG...ATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000449617.5
ENST00000451653.5
CDS-3UTR CAA 90 bp ATTCTGCACTTGCTTGGCTTTAAACAGTCCTGTAGCTGTTTGCTGCAGGTATATAACGAATTCTGTTGTTaGAAGCCAGTTTGTGGTCAT +
Preference number: 5 (lower is better)
Translates to: ILHLLGFKQSCSCLLQVYNEFCC*KPVCGH
Trigger: ATGACCACAAACTGGCTTCAAACAACAGAATTCGTT...ATATACCTGCAGCAAACAGCTACAGGACTGTTTAAAGCCAAGCAAGTGCAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454141.5
CDS TCA 90 bp AGCTGTTTGCTGCAGGTATATTGTCTCTTCAGTTCGACCTATTCCTaGGACTGTCTTTCTTCCGCTTCCTTTAAAATGTTGTATACTAAA +
Preference number: 5 (lower is better)
Translates to: SCLLQVYCLFSSTYS*DCLSSASFKMLYTK
Trigger: TTTAGTATACAACATTTTAAAGGAAGCGGAAGAAAGACAGTCTCAGGAATAGGTCGAACTGAAGAGACAATATACCTGCAGCAAACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5
CDS-3UTR CAA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGAAAACCGTAAGAAGCTaGTGTAACATGAACAGCAAG +
Preference number: 5 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMKTVRS*CNMNSK
Trigger: CTTGCTGTTCATGTTACACAAGCTTCTTACGGTTTT...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000417572.5
ENST00000423701.6
ENST00000451653.5
CDS-3UTR CAA 90 bp ACACTTCTGAAGCAACCCCAGAATCATATAAATGTAAGGGTTAAAGGTCATATGAGTGTAGAGACAACTTaGGAGTTTATGTCTGAGTAT +
Preference number: 5 (lower is better)
Translates to: TLLKQPQNHINVRVKGHMSVETT*EFMSEY
Trigger: ATACTCAGACATAAACTCCAAAGTTGTCTCTACACT...CATATGACCTTTAACCCTTACATTTATATGATTCTGGGGTTGCTTCAGAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS GCA 72 bp CAGGTCACCGGCAGCCCAGGCGCAGGTAGGCCGTGGTaGGCGTGCGCGAGTCTTGAGCCACCCCACCTCCCC +
Preference number: 6 (lower is better)
Translates to: QVTGSPGAGRPW*ACASLEPPHLP
Trigger: GGGGAGGTGGGGTGGCTCAAGACTCGCGCACGCGCACCACGGCCTACCTGCGCCTGGGCTGCCGGTGACCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273156.11
ENST00000456222.1
CDS CCA 72 bp GCCCAGGTCACCGGCAGCCCAGGCGCAGGTAGGCCGTaGTGCGCGTGCGCGAGTCTTGAGCCACCCCACCTC +
Preference number: 6 (lower is better)
Translates to: AQVTGSPGAGRP*CACASLEPPHL
Trigger: GAGGTGGGGTGGCTCAAGACTCGCGCACGCGCACCACGGCCTACCTGCGCCTGGGCTGCCGGTGACCTGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273156.11
ENST00000456222.1
CDS GCA 72 bp CCCTCGCCCGGACGGCGGCCTTCGGAAGTCGGCGCCTaGCAGCTACCCGCCGCCTCCTCAGCAATCTTAGCC +
Preference number: 6 (lower is better)
Translates to: PSPGRRPSEVGA*QLPAASSAILA
Trigger: GGCTAAGATTGCTGAGGAGGCGGCGGGTAGCTGGCAGGCGCCGACTTCCGAAGGCCGCCGTCCGGGCGAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456222.1
CDS GCA 72 bp ACCTCGCCCGGACGGCGGCCTTCGGAAGTCGGCGCCTaGCAGCTACCCGCCGCCTCCTCAGCAATCTTAGCC +
Preference number: 6 (lower is better)
Translates to: TSPGRRPSEVGA*QLPAASSAILA
Trigger: GGCTAAGATTGCTGAGGAGGCGGCGGGTAGCTGGCAGGCGCCGACTTCCGAAGGCCGCCGTCCGGGCGAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000383750.8
ENST00000423701.6
ENST00000445388.5
ENST00000449617.5
ENST00000454141.5
CDS GCA 72 bp TGCTCGCCCGGACGGCGGCCTTCGGAAGTCGGCGCCTaGCAGCTACCCGCCGCCTCCTCAGCAATCTTAGCC +
Preference number: 6 (lower is better)
Translates to: CSPGRRPSEVGA*QLPAASSAILA
Trigger: GGCTAAGATTGCTGAGGAGGCGGCGGGTAGCTGGCAGGCGCCGACTTCCGAAGGCCGCCGTCCGGGCGAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416880.5
CDS CCA 72 bp CCTCTCTCCCAGCTCTTGCCGCCACCTCGGTCGCGATaGGGGCGCAGGACCGGCCGCAGTGCCACTTCGACA +
Preference number: 6 (lower is better)
Translates to: PLSQLLPPPRSR*GRRTGRSATST
Trigger: TGTCGAAGTGGCACTGCGGCCGGTCCTGCGCCCCCATCGCGACCGAGGTGGCGGCAAGAGCTGGGAGAGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417572.5
CDS GCA 72 bp ATCTCGCCCGGACGGCGGCCTTCGGAAGTCGGCGCCTaGCAGCTACCCGCCGCCTCCTCAGCAATCTTAGCC +
Preference number: 6 (lower is better)
Translates to: ISPGRRPSEVGA*QLPAASSAILA
Trigger: GGCTAAGATTGCTGAGGAGGCGGCGGGTAGCTGGCAGGCGCCGACTTCCGAAGGCCGCCGTCCGGGCGAGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420163.1
CDS GCA 72 bp ACCTCGGTCGCGATGGGGGCGCAGGACCGGCCGCAGTaGCACTTCGACATCGAGATCAACCGGGAGCCGGGT +
Preference number: 6 (lower is better)
Translates to: TSVAMGAQDRPQ*HFDIEINREPG
Trigger: ACCCGGCTCCCGGTTGATCTCGATGTCGAAGTGGCACTGCGGCCGGTCCTGCGCCCCCATCGCGACCGAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417572.5
CDS TCA 72 bp ACCATCCTGGCTAACACAGTGGAACCCCGTCTCTACTaGCGAGATGGAGGGCGCAGGCGCATCCACGGCTTT +
Preference number: 6 (lower is better)
Translates to: TILANTVEPRLY*RDGGRRRIHGF
Trigger: AAAGCCGTGGATGCGCCTGCGCCCTCCATCTCGTCAGTAGAGACGGGGTTCCACTGTGTTAGCCAGGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450981.5
CDS CCA 72 bp CCTCATTTGGGTCAGGGGTGGCTGGCTCACGAGGTTTaGTCCAACCAGCAGAACCAGCTCCTTGGATCCTGT +
Preference number: 6 (lower is better)
Translates to: PHLGQGWLAHEV*SNQQNQLLGSC
Trigger: ACAGGATCCAAGGAGCTGGTTCTGCTGGTTGGACCAAACCTCGTGAGCCAGCCACCCCTGACCCAAATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423701.6
CDS TCA 72 bp GTAATTCTCACGTCCGGAGGTGAGAAGGAGCCTTCGTaGTCTAAGCTCGATTCCTGCCGGGGTAGCAACCGG +
Preference number: 6 (lower is better)
Translates to: VILTSGGEKEPS*SKLDSCRGSNR
Trigger: CCGGTTGCTACCCCGGCAGGAATCGAGCTTAGATCACGAAGGCTCCTTCTCACCTCCGGACGTGAGAATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456515.5
CDS CCA 72 bp GAGGTCAGGAAATCGAGACCATCCTGGCTAACACAGTaGAACCCCGTCTCTACTGACGAGATGGAGGGCGCA +
Preference number: 6 (lower is better)
Translates to: EVRKSRPSWLTQ*NPVSTDEMEGA
Trigger: TGCGCCCTCCATCTCGTCAGTAGAGACGGGGTTCCACTGTGTTAGCCAGGATGGTCTCGATTTCCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450981.5
CDS CCA 72 bp AAGTCACAACCTTCTGCAGAACCTCGACCTGGATACTaGGCCAGTCGCAAGGCTAAACTCTTGAGCCGTCTC +
Preference number: 6 (lower is better)
Translates to: KSQPSAEPRPGY*ASRKAKLLSRL
Trigger: GAGACGGCTCAAGAGTTTAGCCTTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCAGAAGGTTGTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000264454.8
ENST00000273156.11
ENST00000383750.8
ENST00000416880.5
ENST00000417572.5
ENST00000420163.1
ENST00000423701.6
ENST00000445388.5
ENST00000449617.5
ENST00000450981.5
ENST00000454141.5
ENST00000456222.1
ENST00000456515.5
ENST00000493107.5
CDS CCA 72 bp ACTAATTTTTCCCCGAGTGCTTTATCCTTCTGGCTCTaGAGGTACATGTGTAAATCTCGCCCGGACGGCGGC +
Preference number: 6 (lower is better)
Translates to: TNFSPSALSFWL*RYMCKSRPDGG
Trigger: GCCGCCGTCCGGGCGAGATTTACACATGTACCTCCAGAGCCAGAAGGATAAAGCACTCGGGGAAAAATTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420163.1
CDS CAA 72 bp ATTTGCCAGAGGTTCCTCAGCCCGTGCAGGTACATGTaGCCCAGGCAAATAAAGAGCAGCATAAGCACCACC +
Preference number: 6 (lower is better)
Translates to: ICQRFLSPCRYM*PRQIKSSISTT
Trigger: GGTGGTGCTTATGCTGCTCTTTATTTGCCTGGGCAACATGTACCTGCACGGGCTGAGGAACCTCTGGCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS CAA 90 bp TGGAAAAGGATTTGCCAGAGGTTCCTCAGCCCGTGCAGGTACATGTaGCCCAGGCAAATAAAGAGCAGCATAAGCACCACCTTCATAGTC +
Preference number: 6 (lower is better)
Translates to: WKRICQRFLSPCRYM*PRQIKSSISTTFIV
Trigger: GACTATGAAGGTGGTGCTTATGCTGCTCTTTATTTGCCTGGGCAACATGTACCTGCACGGGCTGAGGAACCTCTGGCAAATCCTTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS GCA 72 bp GAAGACAGAAAAGCCACTCCTATGTGGAAAAGGATTTaGCAGAGGTTCCTCAGCCCGTGCAGGTACATGTTG +
Preference number: 6 (lower is better)
Translates to: EDRKATPMWKRI*QRFLSPCRYML
Trigger: CAACATGTACCTGCACGGGCTGAGGAACCTCTGGCAAATCCTTTTCCACATAGGAGTGGCTTTTCTGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS TCA 72 bp CAGCTCCTTGGATCCTGTAAAGAATGTTCTGCAAGGTaGACTCCTCGAATGAGATTCAGGGCAGCACACATG +
Preference number: 6 (lower is better)
Translates to: QLLGSCKECSAR*TPRMRFRAAHM
Trigger: CATGTGTGCTGCCCTGAATCTCATTCGAGGAGTTCACCTTGCAGAACATTCTTTACAGGATCCAAGGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423701.6
CDS GCA 72 bp CAAGACCTTGTCTTGTATACTAAAGTCACAACCTTCTaGAGAACCTCGACCTGGATACTGGGCCAGTCGCAA +
Preference number: 6 (lower is better)
Translates to: QDLVLYTKVTTF*RTSTWILGQSQ
Trigger: TTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCAGAAGGTTGTGACTTTAGTATACAAGACAAGGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383750.8
ENST00000445388.5
CDS GCA 72 bp GACTTCTCCACATTGTATACTAAAGTCACAACCTTCTaGAGAACCTCGACCTGGATACTGGGCCAGTCGCAA +
Preference number: 6 (lower is better)
Translates to: DFSTLYTKVTTF*RTSTWILGQSQ
Trigger: TTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCAGAAGGTTGTGACTTTAGTATACAATGTGGAGAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456222.1
ENST00000493107.5
CDS CAA 90 bp GTCATCCTCATACTCCACAGTCAGACTGCTTCTCCTGAAGCTGCCTaGTTAGTATCTGATATGAAGACAGAAAAGCCACTCCTATGTGGA +
Preference number: 6 (lower is better)
Translates to: VILILHSQTASPEAA*LVSDMKTEKPLLCG
Trigger: TCCACATAGGAGTGGCTTTTCTGTCTTCATATCAGATACTAACAAGGCAGCTTCAGGAGAAGCAGTCTGACTGTGGAGTATGAGGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS CCA 72 bp TCACCTATCTGTGTGTCTACTGACTCCCACTCACTGTaGAATGTCTCCTCTTGTGTTTTGTCCTTTTTGCTG +
Preference number: 6 (lower is better)
Translates to: SPICVSTDSHSL*NVSSCVLSFLL
Trigger: CAGCAAAAAGGACAAAACACAAGAGGAGACATTCCACAGTGAGTGGGAGTCAGTAGACACACAGATAGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487701.1
CDS CAA 72 bp ATACTCCACAGTCAGACTGCTTCTCCTGAAGCTGCCTaGTTAGTATCTGATATGAAGACAGAAAAGCCACTC +
Preference number: 6 (lower is better)
Translates to: ILHSQTASPEAA*LVSDMKTEKPL
Trigger: GAGTGGCTTTTCTGTCTTCATATCAGATACTAACAAGGCAGCTTCAGGAGAAGCAGTCTGACTGTGGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264454.8
ENST00000451653.5
CDS TCA 72 bp AAGAGAAGTCATGAGGACACCTTCAGCCACAGGACTTaGGAACTGGTTACCAAATCTGTAGATTCTATTAAG +
Preference number: 6 (lower is better)
Translates to: KRSHEDTFSHRT*ELVTKSVDSIK
Trigger: CTTAATAGAATCTACAGATTTGGTAACCAGTTCTCAAGTCCTGTGGCTGAAGGTGTCCTCATGACTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416880.5
CDS TCA 72 bp CTGCAGGTATATTGTCTCTTCAGTTCGACCTATTCCTaGGACTGTCTTTCTTCCGCTTCCTTTAAAATGTTG +
Preference number: 6 (lower is better)
Translates to: LQVYCLFSSTYS*DCLSSASFKML
Trigger: CAACATTTTAAAGGAAGCGGAAGAAAGACAGTCTCAGGAATAGGTCGAACTGAAGAGACAATATACCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449617.5