RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC16B (Homo sapiens)

Ensembl gene IDs: ENSG00000120341

Ensembl transcript IDs: ENST00000308284.10, ENST00000327037.8, ENST00000441371.1, ENST00000464631.6, ENST00000495165.5, ENST00000528461.5

Found 597 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGAGGAGGACCTGTGGCCTGAGGCCCCCGCCAATGCTGTAATGTaGGGCCCACGGGGCATCTCCTTGCACAGACCTGCACAGATAACA +
Preference number: 1 (lower is better)
Translates to: AEEDLWPEAPANAVM*GPRGISLHRPAQIT
Trigger: TGTTATCTGTGCAGGTCTGTGCAAGGAGATGCCCCGTGGGCCCCACATTACAGCATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR CCA 90 bp GGCCCAGGTGTGTCTGCAGCATTTCCTCCCAGACTGTTCCTCCAGTaGCCTCTGTCACTGCCACGCTGCTGCCAGTCCCTGGTAGATGGG +
Preference number: 1 (lower is better)
Translates to: GPGVSAAFPPRLFLQ*PLSLPRCCQSLVDG
Trigger: CCCATCTACCAGGGACTGGCAGCAGCGTGGCAGTGACAGAGGCCACTGGAGGAACAGTCTGGGAGGAAATGCTGCAGACACACCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CCA 90 bp TCTCCACAACACGTGGCTGCCTGTGGAATCCTCCCCGACATGAGCTaGAAGAGGGTCTGCAGTGGGTCATTGAGCGCCAGCGTGCTGGTG +
Preference number: 1 (lower is better)
Translates to: SPQHVAACGILPDMS*KRVCSGSLSASVLV
Trigger: CACCAGCACGCTGGCGCTCAATGACCCACTGCAGACCCTCTTCCAGCTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR TCA 90 bp GCTGGGCTGGAGCAGGCAGGTCTGCTCAGGTGTCAGCCACAGAGCTaGGCGGTACCCAGGGGCTTCAGAGTAGCCTTGACATCCAGAAAA +
Preference number: 1 (lower is better)
Translates to: AGLEQAGLLRCQPQS*AVPRGFRVALTSRK
Trigger: TTTTCTGGATGTCAAGGCTACTCTGAAGCCCCTGGGTACCGCTCAGCTCTGTGGCTGACACCTGAGCAGACCTGCCTGCTCCAGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 90 bp CCTCCCAGACTGTTCCTCCAGTGGCCTCTGTCACTGCCACGCTGCTaGCAGTCCCTGGTAGATGGGTCTCAGGAACTGAGTAAAAAGGCC +
Preference number: 1 (lower is better)
Translates to: PPRLFLQWPLSLPRC*QSLVDGSQELSKKA
Trigger: GGCCTTTTTACTCAGTTCCTGAGACCCATCTACCAGGGACTGGCAGCAGCGTGGCAGTGACAGAGGCCACTGGAGGAACAGTCTGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CCA 90 bp CGCCAGCGTGCTGGTGAAGCCACTCATGACCCAGCTGTAGGTCTGTaGGTCCATCTTGCTGGACAGGAACAAAGCATGGCCCCACAAGTG +
Preference number: 1 (lower is better)
Translates to: RQRAGEATHDPAVGL*VHLAGQEQSMAPQV
Trigger: CACTTGTGGGGCCATGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR TCA 90 bp GATGGTCTGTCTTCACGGTGTAGTGGCCAAAGGGCACGTGAGCCATaGGATAGCAGAAGTGAGCTGCCTCCACAAGCCCCTTCCCAGCCA +
Preference number: 1 (lower is better)
Translates to: DGLSSRCSGQRAREP*DSRSELPPQAPSQP
Trigger: TGGCTGGGAAGGGGCTTGTGGAGGCAGCTCACTTCTGCTATCTCATGGCTCACGTGCCCTTTGGCCACTACACCGTGAAGACAGACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 90 bp GGCCAGTCCTCATCGGTCAGGTTGATGAGGTTGGCCACAGGGGGCTaGCGCTTGTACTTCTCCAGCTTCTTGCAGTCTTGCATTAGCAGC +
Preference number: 1 (lower is better)
Translates to: GQSSSVRLMRLATGG*RLYFSSFLQSCISS
Trigger: GCTGCTAATGCAAGACTGCAAGAAGCTGGAGAAGTACAAGCGGCAGCCCCCTGTGGCCAACCTCATCAACCTGACCGATGAGGACTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CCA 90 bp AGCCAGGGTGTCCCCAATGGCAACAATCGCACGCTGATACAGCTCTaGGTCCCCAGCCTGATTCGACAGAATCACAGCCAAGTGAGGCCT +
Preference number: 1 (lower is better)
Translates to: SQGVPNGNNRTLIQL*VPSLIRQNHSQVRP
Trigger: AGGCCTCACTTGGCTGTGATTCTGTCGAATCAGGCTGGGGACCCAGAGCTGTATCAGCGTGCGATTGTTGCCATTGGGGACACCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CCA 90 bp GCACAGGGTGACTGCTCTCTCCCTGGCTCAAGACAGCTGCACCAATaGCTTCGCAGTAATGCAAAGCCTGGGACACGAGGCCATAATCTG +
Preference number: 1 (lower is better)
Translates to: AQGDCSLPGSRQLHQ*LRSNAKPGTRGHNL
Trigger: CAGATTATGGCCTCGTGTCCCAGGCTTTGCATTACTGCGAAGCCATTGGTGCAGCTGTCTTGAGCCAGGGAGAGAGCAGTCACCCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 90 bp TTTCCTCCCAGACTGTTCCTCCAGTGGCCTCTGTCACTGCCACGCTaGTGCCAGTCCCTGGTAGATGGGTCTCAGGAACTGAGTAAAAAG +
Preference number: 1 (lower is better)
Translates to: FPPRLFLQWPLSLPR*CQSLVDGSQELSKK
Trigger: CTTTTTACTCAGTTCCTGAGACCCATCTACCAGGGACTGGCAGCAGCGTGGCAGTGACAGAGGCCACTGGAGGAACAGTCTGGGAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 90 bp GGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTGCAGGCTGACTaGCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACCAT +
Preference number: 1 (lower is better)
Translates to: GRQCGATVKRALQAD*LDSESNSPTPSLYH
Trigger: ATGGTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGCCCTTTTAACTGTTGCACCACACTGCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR GCA 90 bp CAGAGACCAGGAACCTGGAAGGAACAGGCAATGAGCTGGGTACACTaGCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTG +
Preference number: 1 (lower is better)
Translates to: QRPGTWKEQAMSWVH*LSGRQCGATVKRAL
Trigger: CAAAGCCCTTTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCAGGTTCCTGGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR CCA 90 bp GAACAGCCCCTTTTAAGGCAGGTGGAGGAAGAAGAACACCAGGGTTaGAGCAGAGCTCAAAGGAAACACTCTCTGGTCCAGACAAGCCTC +
Preference number: 1 (lower is better)
Translates to: EQPLLRQVEEEEHQG*SRAQRKHSLVQTSL
Trigger: GAGGCTTGTCTGGACCAGAGAGTGTTTCCTTTGAGCTCTGCTCCAACCCTGGTGTTCTTCTTCCTCCACCTGCCTTAAAAGGGGCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 90 bp GTTAGGGCCCTAATTTCCCCAAGGCTCTCAAGCCACCACCATAAGTaGCACCACCATGTCACTCTGCTCATGTGCAGTCTGCTATTAGAC +
Preference number: 1 (lower is better)
Translates to: VRALISPRLSSHHHK*HHHVTLLMCSLLLD
Trigger: GTCTAATAGCAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCTTGGGGAAATTAGGGCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
3UTR GCA 90 bp TCCGAAGTTGCGCTAGCCAATCTGGCTCCAGGTCCCTGTCTCCACTaGGTCTTTCTAAAACCAGAGGATCTGACAGCTTCAGTTTCTCTG +
Preference number: 1 (lower is better)
Translates to: SEVALANLAPGPCLH*VFLKPEDLTASVSL
Trigger: CAGAGAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAGATTGGCTAGCGCAACTTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CCA 90 bp GGATTCTTTGACAAGCTAGCCATGTGCTATCAGAGACCAGGAACCTaGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGG +
Preference number: 1 (lower is better)
Translates to: GFFDKLAMCYQRPGT*KEQAMSWVHCLSGR
Trigger: CCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCAGGTTCCTGGTCTCTGATAGCACATGGCTAGCTTGTCAAAGAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR CCA 90 bp CCTGAGCTCTTTGTATGCTCCTTCCCATCTCCGAGCTTGCCTCTCTaGGCAGTATTTCGGGGAGAGTTTTTATCAGCCTCATCAGAGGAC +
Preference number: 1 (lower is better)
Translates to: PELFVCSFPSPSLPL*AVFRGEFLSASSED
Trigger: GTCCTCTGATGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGATGGGAAGGAGCATACAAAGAGCTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 90 bp AGCCAAACCCTGAGCTCTTTGTATGCTCCTTCCCATCTCCGAGCTTaGCTCTCTGGGCAGTATTTCGGGGAGAGTTTTTATCAGCCTCAT +
Preference number: 1 (lower is better)
Translates to: SQTLSSLYAPSHLRA*LSGQYFGESFYQPH
Trigger: ATGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGATGGGAAGGAGCATACAAAGAGCTCAGGGTTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CCA 90 bp ATGTGCTATCAGAGACCAGGAACCTGGAAGGAACAGGCAATGAGCTaGGTACACTGCCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAA +
Preference number: 1 (lower is better)
Translates to: MCYQRPGTWKEQAMS*VHCLSGRQCGATVK
Trigger: TTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCAGGTTCCTGGTCTCTGATAGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR GCA 90 bp AATGGCTTCGCAGTAATGCAAAGCCTGGGACACGAGGCCATAATCTaGCAGACGGGAAGCATAAAGGAGCTTATACACCTGGAAAGAAGG +
Preference number: 1 (lower is better)
Translates to: NGFAVMQSLGHEAII*QTGSIKELIHLERR
Trigger: CCTTCTTTCCAGGTGTATAAGCTCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATTACTGCGAAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR TCA 90 bp GTTTTTATCAGCCTCATCAGAGGACTCCTTCTCATCCTCCTTGGCTaGACTGGCGGAACTCTCAGAAATACTTCGTGGTCTAGCAGCCAA +
Preference number: 1 (lower is better)
Translates to: VFISLIRGLLLILLG*TGGTLRNTSWSSSQ
Trigger: TTGGCTGCTAGACCACGAAGTATTTCTGAGAGTTCCGCCAGTTCAGCCAAGGAGGATGAGAAGGAGTCCTCTGATGAGGCTGATAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 90 bp ATTGTACATTTGGCACAGAAGGGATTCTTTGACAAGCTAGCCATGTaGTATCAGAGACCAGGAACCTGGAAGGAACAGGCAATGAGCTGG +
Preference number: 1 (lower is better)
Translates to: IVHLAQKGFFDKLAM*YQRPGTWKEQAMSW
Trigger: CCAGCTCATTGCCTGTTCCTTCCAGGTTCCTGGTCTCTGATAGCACATGGCTAGCTTGTCAAAGAATCCCTTCTGTGCCAAATGTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR GCA 90 bp AGGAAACACTCTCTGGTCCAGACAAGCCTCCAACCCCAGCGCCCGCAGCTGCTCCCCTGCACCCCCTCCTaGTGGGTAGGAGCCCGGCTG +
Preference number: 2 (lower is better)
Translates to: RKHSLVQTSLQPQRPQLLPCTPS*WVGARL
Trigger: CAGCCGGGCTCCTACCCAGCAGGAGGGGGTGCAGGG...GAGCAGCTGCGGGCGCTGGGGTTGGAGGCTTGTCTGGACCAGAGAGTGTTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CAA 90 bp TTCGGGGTCCCAGAGCTCAGCACTGGCCAGTCCTCATCGGTCAGGTaGATGAGGTTGGCCACAGGGGGCTGCCGCTTGTACTTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: FGVPELSTGQSSSVR*MRLATGGCRLYFSS
Trigger: GCTGGAGAAGTACAAGCGGCAGCCCCCTGTGGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGGACCCCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp AGGAAACACTCTCTGGTCCAGACAAGCCTCCAACCCCAGCGCCCGCAGCTGCTCTCACTGCCACGCTGCTaGCAGTCCCTGGTAGATGGG +
Preference number: 2 (lower is better)
Translates to: RKHSLVQTSLQPQRPQLLSLPRC*QSLVDG
Trigger: CCCATCTACCAGGGACTGGCAGCAGCGTGGCAGTGA...GAGCAGCTGCGGGCGCTGGGGTTGGAGGCTTGTCTGGACCAGAGAGTGTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR TCA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACGGAGGACCTGTGGCCTaGGGCCCCCGCCAATGCTGT +
Preference number: 2 (lower is better)
Translates to: LQADCLDSESNSPTPSLYGGPVA*GPRQCC
Trigger: ACAGCATTGGCGGGGGCCTCAGGCCACAGGTCCTCC...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR CCA 90 bp AGTCAGGGCTGTCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTTGGTGGGCATGGCCCCACAAGTaGTTCTTCATGGCCCACTCC +
Preference number: 2 (lower is better)
Translates to: SQGCLRSPRLQRGMRSWWAWPHK*FFMAHS
Trigger: GGAGTGGGCCATGAAGAACCACTTGTGGGGCCATGC...CCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CCA 90 bp AGTCAGGGCTGTCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTTGGTGGCCGAGCTTGCCTCTCTaGGCAGTATTTCGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: SQGCLRSPRLQRGMRSWWPSLPL*AVFRGE
Trigger: CTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGG...CCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CAA 90 bp CCAGAGCTCAGCACTGGCCAGTCCTCATCGGTCAGGTTGATGAGGTaGGCCACAGGGGGCTGCCGCTTGTACTTCTCCAGCTTCTTGCAG +
Preference number: 2 (lower is better)
Translates to: PELSTGQSSSVRLMR*ATGGCRLYFSSFLQ
Trigger: CTGCAAGAAGCTGGAGAAGTACAAGCGGCAGCCCCCTGTGGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CAA 90 bp TCAGGGCTGTCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTaGGTGGGCTTCGATCGAAACCAGCTGAACCAGCCAAACCCTGAG +
Preference number: 2 (lower is better)
Translates to: SGLSEESSSPAGDAF*VGFDRNQLNQPNPE
Trigger: CTCAGGGTTTGGCTGGTTCAGCTGGTTTCGATCGAAGCCCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR TCA 90 bp GCCAATGGTGTCTGTGGTTTGGAAATGACCTCTTGGCCATCAGGAGGCTGGGAAGGGGGATCTCTCCCGTaGGCAGGTTCGGGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: ANGVCGLEMTSWPSGGWEGGSLP*AGSGSQ
Trigger: CTGGGACCCCGAACCTGCTCACGGGAGAGATCCCCC...TTCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAAACCACAGACACCATTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp CGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGGGAGCAAGAACAGGCCCAGGGCTaGCTAACACGGACCCACAAG +
Preference number: 2 (lower is better)
Translates to: RMGRGIERYRTGRASREQEQAQG*LTRTHK
Trigger: CTTGTGGGTCCGTGTTAGGCAGCCCTGGGCCTGTTC...TTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR GCA 90 bp GCTAGTGGCCGTGGGCAGCTGAGGCACCTGAGATGGGTTGTAAAGAGGAACAGCAGCTGGAAGAGGGTCTaGAGTGGGTCATTGAGCGCC +
Preference number: 2 (lower is better)
Translates to: ASGRGQLRHLRWVVKRNSSWKRV*SGSLSA
Trigger: GGCGCTCAATGACCCACTGCAGACCCTCTTCCAGCT...GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp GCTAGTGGCCGTGGGCAGCTGAGGCACCTGAGATGGGTTGTAAAGAGGAACAGCTCCACAACACGTGGCTaGCTGTGGAATCCTCCCCGA +
Preference number: 2 (lower is better)
Translates to: ASGRGQLRHLRWVVKRNSSTTRG*LWNPPR
Trigger: TCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGA...GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp GCTAGTGGCCGTGGGCAGCTGAGGCACCTGAGATGGGTTGTAAAGAGGAACAGCCTGTCACTGCCACGCTaGTGCCAGTCCCTGGTAGAT +
Preference number: 2 (lower is better)
Translates to: ASGRGQLRHLRWVVKRNSLSLPR*CQSLVD
Trigger: ATCTACCAGGGACTGGCAGCAGCGTGGCAGTGACAG...GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CCA 90 bp CGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGGGAGCAAGCCAATGCTGTAATGTaGGGCCCACGGGGCATCTCC +
Preference number: 2 (lower is better)
Translates to: RMGRGIERYRTGRASREQANAVM*GPRGIS
Trigger: GGAGATGCCCCGTGGGCCCCACATTACAGCATTGGC...TTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR TCA 90 bp GCTAGTGGCCGTGGGCAGCTGAGGCACCTGAGATGGGTTGTAAAGAGGAACAGCTCGATCGAAACCAGCTaGACCAGCCAAACCCTGAGC +
Preference number: 2 (lower is better)
Translates to: ASGRGQLRHLRWVVKRNSSIETS*TSQTLS
Trigger: GCTCAGGGTTTGGCTGGTTCAGCTGGTTTCGATCGA...GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp GAGCGCCAGCGTGCTGGTGAAGCCACTCATGACCCAGCTGTAGGTCTGTGGGTCAATTTCTCCACGATCTaGGCAGGTGTCTCCACACTG +
Preference number: 2 (lower is better)
Translates to: ERQRAGEATHDPAVGLWVNFSTI*AGVSTL
Trigger: CAGTGTGGAGACACCTGCGCAGATCGTGGAGAAATT...GACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CCA 90 bp GTACACTGCCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTGCAGGCAGAGGAGGACCTGTaGCCTGAGGCCCCCGCCAAT +
Preference number: 2 (lower is better)
Translates to: VHCLSGRQCGATVKRALQAEEDL*PEAPAN
Trigger: ATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGC...CTGCAAAGCCCTTTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR CCA 90 bp GAGCGCCAGCGTGCTGGTGAAGCCACTCATGACCCAGCTGTAGGTCTGTGGGTCACCATGGACCCATTCTaGCGACAAAGGAGAACCAAG +
Preference number: 2 (lower is better)
Translates to: ERQRAGEATHDPAVGLWVTMDPF*RQRRTK
Trigger: CTTGGTTCTCCTTTGTCGCCAGAATGGGTCCATGGT...GACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CCA 90 bp AGTCAGGGCTGTCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTTGGTGGACAAGTGGTTCTTCATaGCCCACTCCAAGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: SQGCLRSPRLQRGMRSWWTSGSS*PTPRLP
Trigger: AGGAAGCCTTGGAGTGGGCCATGAAGAACCACTTGT...CCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR TCA 90 bp AGTCAGGGCTGTCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTTGGTGGAATTTCAAAAACTCTTaGCTGTGGCTGCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: SQGCLRSPRLQRGMRSWWNFKNS*LWLLPS
Trigger: GCTGGGCAGCAGCCACAGTCAAGAGTTTTTGAAATT...CCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACATCAGCCCACCTCTTTaGAGAGGAGGACCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: LQADCLDSESNSPTPSLYISPPL*RGGPVA
Trigger: GGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGAT...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR GCA 90 bp GTCCCAGAGCTCAGCACTGGCCAGTCCTCATCGGTCAGGTTGATGAGGTTGGCCAGGAGAACCAAGAGCTaGCACAGTAGAGCTGAGTCT +
Preference number: 2 (lower is better)
Translates to: VPELSTGQSSSVRLMRLARRTKS*HSRAES
Trigger: AGACTCAGCTCTACTGTGGCAGCTCTTGGTTCTCCT...GGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp GAGCGCCAGCGTGCTGGTGAAGCCACTCATGACCCAGCTGTAGGTCTGTGGGTCAGCTTCTTGCAGTCTTaGATTAGCAGCTCAGCGATG +
Preference number: 2 (lower is better)
Translates to: ERQRAGEATHDPAVGLWVSFLQS*ISSSAM
Trigger: CATCGCTGAGCTGCTAATGCAAGACTGCAAGAAGCT...GACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp CTGGCTCCAGGTCCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACATTGGCCACAGGGGGCTaGCGCTTGTACTTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: LAPGPCLHCVFLKPEDLTLATGG*RLYFSS
Trigger: GCTGGAGAAGTACAAGCGGCAGCCCCCTGTGGCCAA...TGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp TCTCCGAGCTTGCCTCTCTGGGCAGTATTTCGGGGAGAGTTTTTATCAGCCTCAAGTGGCCTCTGTCACTaGCACGCTGCTGCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: SPSLPLWAVFRGEFLSASSGLCH*HAAASP
Trigger: GGGACTGGCAGCAGCGTGGCAGTGACAGAGGCCACT...TGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR TCA 90 bp CAATGTCTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATAGAATCACAGCCAAGTaGGGCCTCCAGTCTCCCCAC +
Preference number: 2 (lower is better)
Translates to: QCLLLPFAPAASEVALANRITAK*GLQSPH
Trigger: GTGGGGAGACTGGAGGCCTCACTTGGCTGTGATTCT...ATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR TCA 90 bp CAATGTCTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATGGGCGGCCCAGCATCTaGCAGTACTCGAAGATTTCC +
Preference number: 2 (lower is better)
Translates to: QCLLLPFAPAASEVALANGRPSI*QYSKIS
Trigger: GGAAATCTTCGAGTACTGTCAGATGCTGGGCCGCCC...ATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp TGCTGCCAGTCCCTGGTAGATGGGTCTCAGGAACTGAGTAAAAAGGCCTCGGTGATAGCAGAAGTGAGCTaGCTCCACAAGCCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: CCQSLVDGSQELSKKASVIAEVS*LHKPLP
Trigger: GGGAAGGGGCTTGTGGAGGCAGCTCACTTCTGCTAT...CACCGAGGCCTTTTTACTCAGTTCCTGAGACCCATCTACCAGGGACTGGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CCA 90 bp TCTCCGAGCTTGCCTCTCTGGGCAGTATTTCGGGGAGAGTTTTTATCAGCCTCACCCAGAGCTCAGCACTaGCCAGTCCTCATCGGTCAG +
Preference number: 2 (lower is better)
Translates to: SPSLPLWAVFRGEFLSASPRAQH*PVLIGQ
Trigger: CTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGG...TGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CCA 90 bp CTGGCTCCAGGTCCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAACACGTGGCTGCCTGTaGAATCCTCCCCGACATGAG +
Preference number: 2 (lower is better)
Translates to: LAPGPCLHCVFLKPEDLTTRGCL*NPPRHE
Trigger: CTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGT...TGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp TGCTGCCAGTCCCTGGTAGATGGGTCTCAGGAACTGAGTAAAAAGGCCTCGGTGATAGCACAGGGTGACTaGTCTCTCCCTGGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: CCQSLVDGSQELSKKASVIAQGD*SLPGSR
Trigger: TCTTGAGCCAGGGAGAGAGCAGTCACCCTGTGCTAT...CACCGAGGCCTTTTTACTCAGTTCCTGAGACCCATCTACCAGGGACTGGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp TCTCCGAGCTTGCCTCTCTGGGCAGTATTTCGGGGAGAGTTTTTATCAGCCTCAGGGCCCAGGTGTGTCTaGAGCATTTCCTCCCAGACT +
Preference number: 2 (lower is better)
Translates to: SPSLPLWAVFRGEFLSASGPRCV*SISSQT
Trigger: AGTCTGGGAGGAAATGCTGCAGACACACCTGGGCCC...TGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CCA 90 bp TCCCCCTGCTTCCCATTTCTTGCTACAGGGCCCTGCGGTATCATCTTTGATTCTCTTCTAAGTGCCCGGTaGAGGCATCGGGCTAGCACA +
Preference number: 2 (lower is better)
Translates to: SPCFPFLATGPCGIIFDSLLSAR*RHRAST
Trigger: TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG...AGAATCAAAGATGATACCGCAGGGCCCTGTAGCAAGAAATGGGAAGCAGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
3UTR CAA 90 bp CCCCCTGCTTCCCATTTCTTGCTACAGGGCCCTGCGGTATCATCTTaGATTCTAGCTGTTAGGGCCCTAATTTCCCCAAGGCTCTCAAGC +
Preference number: 2 (lower is better)
Translates to: PPASHFLLQGPAVSS*ILAVRALISPRLSS
Trigger: GCTTGAGAGCCTTGGGGAAATTAGGGCCCTAACAGCTAGAATCAAAGATGATACCGCAGGGCCCTGTAGCAAGAAATGGGAAGCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308284.10
3UTR-3UTR CCA 90 bp GCCAATGGTGTCTGTGGTTTGGAAATGACCTCTTGGCCATCAGGAGGCTGGGAAGTGGGTCCATCTTGCTaGACAGGAACAAAGCATGGC +
Preference number: 2 (lower is better)
Translates to: ANGVCGLEMTSWPSGGWEVGPSC*TGTKHG
Trigger: GCCATGCTTTGTTCCTGTCCAGCAAGATGGACCCAC...TTCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAAACCACAGACACCATTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CCA 90 bp AATGCAAAGCCTGGGACACGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGACCAGCTGTAGGTCTGTaGGTCCATCTTGCTGGACAG +
Preference number: 2 (lower is better)
Translates to: NAKPGTRGHNLPDGKHKGPAVGL*VHLAGQ
Trigger: CTGTCCAGCAAGATGGACCCACAGACCTACAGCTGG...TCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CAA 90 bp CAGCCAAACCCTGAGCTCTTTGTATGCTCCTTCCCATCTCCGAGCTaGCCTCTCTGGGCAGTATTTCGGGGAGAGTTTTTATCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: QPNPELFVCSFPSPS*PLWAVFRGEFLSAS
Trigger: TGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGATGGGAAGGAGCATACAAAGAGCTCAGGGTTTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR TCA 90 bp GCCAATGGTGTCTGTGGTTTGGAAATGACCTCTTGGCCATCAGGAGGCTGGGAATCAGATTTGCAGCTCTaGGCTGCTTTCTGCTGGCAA +
Preference number: 2 (lower is better)
Translates to: ANGVCGLEMTSWPSGGWESDLQL*AAFCWQ
Trigger: TTGCCAGCAGAAAGCAGCTCAGAGCTGCAAATCTGA...TTCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAAACCACAGACACCATTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR TCA 90 bp GCCAATGGTGTCTGTGGTTTGGAAATGACCTCTTGGCCATCAGGAGGCTGGGAAATGGGTCTCAGGAACTaGGTAAAAAGGCCTCGGTGT +
Preference number: 2 (lower is better)
Translates to: ANGVCGLEMTSWPSGGWEMGLRN*VKRPRC
Trigger: ACACCGAGGCCTTTTTACTCAGTTCCTGAGACCCAT...TTCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAAACCACAGACACCATTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp TCTCCGAGCTTGCCTCTCTGGGCAGTATTTCGGGGAGAGTTTTTATCAGCCTCAACTCTTGACTGTGGCTaGTGCCCAGCAAGACCAGAT +
Preference number: 2 (lower is better)
Translates to: SPSLPLWAVFRGEFLSASTLDCG*CPARPD
Trigger: ATCTGGTCTTGCTGGGCAGCAGCCACAGTCAAGAGT...TGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CCA 90 bp GCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGTCTGCTATAGAAAGTTTCAGTCCTaGGAGATGAGCCTGGGACGT +
Preference number: 2 (lower is better)
Translates to: ATTISATTMSLCSCAVCYRKFQS*EMSLGR
Trigger: ACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCT...ATAGCAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
3UTR-3UTR CCA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACTTTTCCAGTTTTGCCTaGGTAGGCTCTCAGAACAGG +
Preference number: 2 (lower is better)
Translates to: LQADCLDSESNSPTPSLYFSSFA*VGSQNR
Trigger: CCTGTTCTGAGAGCCTACCCAGGCAAAACTGGAAAA...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR TCA 90 bp CTACAGGGCCCTGCGGTATCATCTTTGATTCTAGCTGTTAGGGCCCTAATTTCCTTCAGTCCTGGGAGATaGGCCTGGGACGTGTGTTTA +
Preference number: 2 (lower is better)
Translates to: LQGPAVSSLILAVRALISFSPGR*AWDVCL
Trigger: TAAACACACGTCCCAGGCTCATCTCCCAGGACTGAA...GGAAATTAGGGCCCTAACAGCTAGAATCAAAGATGATACCGCAGGGCCCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
3UTR-3UTR GCA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTCTCCTTGCACAGACCTaGACAGATAACAATCCCAAA +
Preference number: 2 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGLLAQT*TDNNPK
Trigger: TTTGGGATTGTTATCTGTGCAGGTCTGTGCAAGGAG...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR GCA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTTCCATTTTCCAGTTTTaGCTGGGTAGGCTCTCAGAA +
Preference number: 2 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGSIFQF*LGRLSE
Trigger: TTCTGAGAGCCTACCCAGGCAAAACTGGAAAATGGA...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR GCA 90 bp CATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAAGCATGCCAGTGTCTCAGATTTaGAGCTCTGAGCTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: HDPAVGLWVHLAGQEQSMPVSQI*SSELLS
Trigger: AGAAAGCAGCTCAGAGCTGCAAATCTGAGACACTGG...CATGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp CGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGAGCTTATACACCTGGAAAGCTCCAGTCTCCCCACTaGTTTTCTCCACAACACGTG +
Preference number: 2 (lower is better)
Translates to: RGHNLPDGKHKGAYTPGKLQSPH*FSPQHV
Trigger: CACGTGTTGTGGAGAAAAGCAGTGGGGAGACTGGAG...CTTTCCAGGTGTATAAGCTCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp TCTCCGAGCTTGCCTCTCTGGGCAGTATTTCGGGGAGAGTTTTTATCAGCCTCACACGAGGCCATAATCTaGCAGACGGGAAGCATAAAG +
Preference number: 2 (lower is better)
Translates to: SPSLPLWAVFRGEFLSASHEAII*QTGSIK
Trigger: CTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTG...TGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CCA 90 bp AATGCAAAGCCTGGGACACGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGAGACAGGAACAAAGCATaGCCCCACAAGTGGTTCTTC +
Preference number: 2 (lower is better)
Translates to: NAKPGTRGHNLPDGKHKGDRNKA*PHKWFF
Trigger: GAAGAACCACTTGTGGGGCCATGCTTTGTTCCTGTC...TCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CCA 90 bp CCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAGCTTCAGTTTCTCCAGGGTGTCCCCAATaGCAACAATCGCACGCTGAT +
Preference number: 2 (lower is better)
Translates to: PCLHCVFLKPEDLTASVSPGCPQ*QQSHAD
Trigger: ATCAGCGTGCGATTGTTGCCATTGGGGACACCCTGG...AGAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR TCA 90 bp TCCCCCTGCTTCCCATTTCTTGCTACAGGGCCCTGCGGTATCATCTTTGATTCTAATTGTGCTGTGTCTTaGGAGATCCTGTCCTCTTGC +
Preference number: 2 (lower is better)
Translates to: SPCFPFLATGPCGIIFDSNCAVS*EILSSC
Trigger: GCAAGAGGACAGGATCTCTCAAGACACAGCACAATT...AGAATCAAAGATGATACCGCAGGGCCCTGTAGCAAGAAATGGGAAGCAGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
3UTR-3UTR CCA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACAAAAGCCTAATGCTATaGCCAACAGAGAATGTCACC +
Preference number: 2 (lower is better)
Translates to: LQADCLDSESNSPTPSLYKSLML*PTENVT
Trigger: GGTGACATTCTCTGTTGGCCATAGCATTAGGCTTTT...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR CCA 90 bp GGCTTCGATCGAAACCAGCTGAACCAGCCAAACCCTGAGCTCTTTGTATGCTCCAGCCAATGGTGTCTGTaGTTTGGAAATGACCTCTTG +
Preference number: 2 (lower is better)
Translates to: GFDRNQLNQPNPELFVCSSQWCL*FGNDLL
Trigger: CAAGAGGTCATTTCCAAACCACAGACACCATTGGCT...GGAGCATACAAAGAGCTCAGGGTTTGGCTGGTTCAGCTGGTTTCGATCGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CAA 90 bp GGAGAGTTTTTATCAGCCTCATCAGAGGACTCCTTCTCATCCTCCTaGGCTGAACTGGCGGAACTCTCAGAAATACTTCGTGGTCTAGCA +
Preference number: 2 (lower is better)
Translates to: GEFLSASSEDSFSSS*AELAELSEILRGLA
Trigger: TGCTAGACCACGAAGTATTTCTGAGAGTTCCGCCAGTTCAGCCAAGGAGGATGAGAAGGAGTCCTCTGATGAGGCTGATAAAAACTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR TCA 90 bp CTACAGGGCCCTGCGGTATCATCTTTGATTCTAGCTGTTAGGGCCCTAATTTCCCTAGCACAAACCTCTTaGGGGTCCCAATATGGTAGA +
Preference number: 2 (lower is better)
Translates to: LQGPAVSSLILAVRALISLAQTS*GSQYGR
Trigger: TCTACCATATTGGGACCCTCAAGAGGTTTGTGCTAG...GGAAATTAGGGCCCTAACAGCTAGAATCAAAGATGATACCGCAGGGCCCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
3UTR-3UTR CCA 90 bp CTTCAGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGGAAGAGGGTCTGCAGTaGGTCATTGAGCGCCAGCGT +
Preference number: 2 (lower is better)
Translates to: LQSSLDIQKSPGRKCFLLEEGLQ*VIERQR
Trigger: ACGCTGGCGCTCAATGACCCACTGCAGACCCTCTTC...CAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CCA 90 bp CTGGCTCCAGGTCCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAAGGAGCTTATACACCTaGAAAGAAGGGATGAAGGAT +
Preference number: 2 (lower is better)
Translates to: LAPGPCLHCVFLKPEDLTRSLYT*KEGMKD
Trigger: ATCCTTCATCCCTTCTTTCCAGGTGTATAAGCTCCT...TGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp CTTCAGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGACCTTTTGCTCCAGCTaGCTCCGAAGTTGCGCTAGC +
Preference number: 2 (lower is better)
Translates to: LQSSLDIQKSPGRKCFLLTFCSS*LRSCAS
Trigger: GCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGT...CAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTTTTGCAGCTCTGAGCTaGTTTCTGCTGGCAAAACGT +
Preference number: 2 (lower is better)
Translates to: RVALTSRKVLVESVFCCCFAALS*FLLAKR
Trigger: ACGTTTTGCCAGCAGAAAGCAGCTCAGAGCTGCAAA...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR GCA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTTTCCGTCCTCTGGATTaGCTCAGTTGTTGCAAATTT +
Preference number: 2 (lower is better)
Translates to: RVALTSRKVLVESVFCCCFRPLD*LSCCKF
Trigger: AAATTTGCAACAACTGAGGCAATCCAGAGGACGGAA...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 72 bp AGGCCTCGGTGTCCCTGTCTGCCCTGCACCCCCTCCTaGTGGGTAGGAGCCCGGCTGGAGGGGAAAGGGCTG +
Preference number: 3 (lower is better)
Translates to: RPRCPCLPCTPS*WVGARLEGKGL
Trigger: CAGCCCTTTCCCCTCCAGCCGGGCTCCTACCCAGCAGGAGGGGGTGCAGGGCAGACAGGGACACCGAGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 72 bp TGGTCCAGACAAGCCTCCAACCCCAGCGCCCGCAGCTaGTCCCCCGCTGGATGCGGATCCTCGGCCTTCACC +
Preference number: 3 (lower is better)
Translates to: WSRQASNPSARS*SPAGCGSSAFT
Trigger: GGTGAAGGCCGAGGATCCGCATCCAGCGGGGGAGCAGCTGCGGGCGCTGGGGTTGGAGGCTTGTCTGGACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CCA 72 bp GACCTGTGGCCTGAGGCCCCCGCCAATGCTGTAATGTaGGGCCCACGGGGCATCTCCTTGCACAGACCTGCA +
Preference number: 3 (lower is better)
Translates to: DLWPEAPANAVM*GPRGISLHRPA
Trigger: TGCAGGTCTGTGCAAGGAGATGCCCCGTGGGCCCCACATTACAGCATTGGCGGGGGCCTCAGGCCACAGGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR TCA 72 bp ATCAGCCCACCTCTTTGCAGAGGAGGACCTGTGGCCTaGGGCCCCCGCCAATGCTGTAATGTGGGGCCCACG +
Preference number: 3 (lower is better)
Translates to: ISPPLCRGGPVA*GPRQCCNVGPT
Trigger: CGTGGGCCCCACATTACAGCATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR CAA 90 bp GCATCAGCCCACCTCTTTGCAGAGGAGGACCTGTGGCCTGAGGCCCCCGCCAATCCACGGGGCATCTCCTaGCACAGACCTGCACAGATA +
Preference number: 3 (lower is better)
Translates to: ASAHLFAEEDLWPEAPANPRGIS*HRPAQI
Trigger: TATCTGTGCAGGTCTGTGCAAGGAGATGCCCCGTGG...ATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR CAA 90 bp GAGCGCCAGCGTGCTGGTGAAGCCACTCATGACCCAGCTGTAGGTCTGTGGGTCTCCTCATCGGTCAGGTaGATGAGGTTGGCCACAGGG +
Preference number: 3 (lower is better)
Translates to: ERQRAGEATHDPAVGLWVSSSVR*MRLATG
Trigger: CCCTGTGGCCAACCTCATCAACCTGACCGATGAGGA...GACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR TCA 72 bp AGATGCTCTGGGGGTCTCCTCAGAGTCAGGGCTGTCTaGGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTT +
Preference number: 3 (lower is better)
Translates to: RCSGGLLRVRAV*GVLVSSGGCVL
Trigger: AAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACTCTGAGGAGACCCCCAGAGCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 72 bp AAAGGGCACGTGAGCCATGAGATAGCAGAAGTGAGCTaGCTCCACAAGCCCCTTCCCAGCCAGGGTGTCCCC +
Preference number: 3 (lower is better)
Translates to: KGHVSHEIAEVS*LHKPLPSQGVP
Trigger: GGGGACACCCTGGCTGGGAAGGGGCTTGTGGAGGCAGCTCACTTCTGCTATCTCATGGCTCACGTGCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CAA 90 bp TTTTCTCCACAACACGTGGCTGCCTGTGGAATCCTCCCCGACATGAGCTGGAAGGTCAGGTTGATGAGGTaGGCCACAGGGGGCTGCCGC +
Preference number: 3 (lower is better)
Translates to: FSPQHVAACGILPDMSWKVRLMR*ATGGCR
Trigger: GCGGCAGCCCCCTGTGGCCAACCTCATCAACCTGAC...CTTCCAGCTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGAGAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR TCA 72 bp GTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTaGGGGTCCCAATATGGTAGAGAGGGGCTGGGAGAT +
Preference number: 3 (lower is better)
Translates to: VPGGGIGLAQTS*GSQYGREGLGD
Trigger: ATCTCCCAGCCCCTCTCTACCATATTGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308284.10
3UTR CCA 72 bp GACTGCTCTCTCCCTGGCTCAAGACAGCTGCACCAATaGCTTCGCAGTAATGCAAAGCCTGGGACACGAGGC +
Preference number: 3 (lower is better)
Translates to: DCSLPGSRQLHQ*LRSNAKPGTRG
Trigger: GCCTCGTGTCCCAGGCTTTGCATTACTGCGAAGCCATTGGTGCAGCTGTCTTGAGCCAGGGAGAGAGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR TCA 72 bp TCTTCACGGTGTAGTGGCCAAAGGGCACGTGAGCCATaGGATAGCAGAAGTGAGCTGCCTCCACAAGCCCCT +
Preference number: 3 (lower is better)
Translates to: SSRCSGQRAREP*DSRSELPPQAP
Trigger: AGGGGCTTGTGGAGGCAGCTCACTTCTGCTATCTCATGGCTCACGTGCCCTTTGGCCACTACACCGTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 72 bp CCACAGGGGGCTGCCGCTTGTACTTCTCCAGCTTCTTaGAGTCTTGCATTAGCAGCTCAGCGATGTCAGACC +
Preference number: 3 (lower is better)
Translates to: PQGAAACTSPAS*SLALAAQRCQT
Trigger: GGTCTGACATCGCTGAGCTGCTAATGCAAGACTGCAAGAAGCTGGAGAAGTACAAGCGGCAGCCCCCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 72 bp CACAGGGTGACTGCTCTCTCCCTGGCTCAAGACAGCTaGACCAATGGCTTCGCAGTAATGCAAAGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: HRVTALSLAQDS*TNGFAVMQSLG
Trigger: TCCCAGGCTTTGCATTACTGCGAAGCCATTGGTGCAGCTGTCTTGAGCCAGGGAGAGAGCAGTCACCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CCA 72 bp CAGAGACCAGGAACCTGGAAGGAACAGGCAATGAGCTaGGTACACTGCCTCAGTGGTAGGCAGTGTGGTGCA +
Preference number: 3 (lower is better)
Translates to: QRPGTWKEQAMS*VHCLSGRQCGA
Trigger: TGCACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCAGGTTCCTGGTCTCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR CAA 90 bp GCCAATGGTGTCTGTGGTTTGGAAATGACCTCTTGGCCATCAGGAGGCTGGGAAACAGGGGGCTGCCGCTaGTACTTCTCCAGCTTCTTG +
Preference number: 3 (lower is better)
Translates to: ANGVCGLEMTSWPSGGWETGGCR*YFSSFL
Trigger: CAAGAAGCTGGAGAAGTACAAGCGGCAGCCCCCTGT...TTCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAAACCACAGACACCATTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CAA 90 bp CTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATCTGGCTGTCTGTGGGTCCATCTaGCTGGACAGGAACAAAGCA +
Preference number: 3 (lower is better)
Translates to: LLLPFAPAASEVALANLAVCGSI*LDRNKA
Trigger: TGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGAC...AGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CCA 72 bp GTCTGTGGGTCCATCTTGCTGGACAGGAACAAAGCATaGCCCCACAAGTGGTTCTTCATGGCCCACTCCAAG +
Preference number: 3 (lower is better)
Translates to: VCGSILLDRNKA*PHKWFFMAHSK
Trigger: CTTGGAGTGGGCCATGAAGAACCACTTGTGGGGCCATGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CCA 72 bp GTCCCCAATGGCAACAATCGCACGCTGATACAGCTCTaGGTCCCCAGCCTGATTCGACAGAATCACAGCCAA +
Preference number: 3 (lower is better)
Translates to: VPNGNNRTLIQL*VPSLIRQNHSQ
Trigger: TTGGCTGTGATTCTGTCGAATCAGGCTGGGGACCCAGAGCTGTATCAGCGTGCGATTGTTGCCATTGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 72 bp CTAATTTCCCCAAGGCTCTCAAGCCACCACCATAAGTaGCACCACCATGTCACTCTGCTCATGTGCAGTCTG +
Preference number: 3 (lower is better)
Translates to: LISPRLSSHHHK*HHHVTLLMCSL
Trigger: CAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCTTGGGGAAATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
3UTR GCA 72 bp TGTGGTGCAACAGTTAAAAGGGCTTTGCAGGCTGACTaGCTGGATTCCGAATCCAACTCACCCACACCCTCA +
Preference number: 3 (lower is better)
Translates to: CGATVKRALQAD*LDSESNSPTPS
Trigger: TGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGCCCTTTTAACTGTTGCACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR GCA 72 bp GTGGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTaGAGGCTGACTGCCTGGATTCCGAATCCAACTCAC +
Preference number: 3 (lower is better)
Translates to: VVGSVVQQLKGL*RLTAWIPNPTH
Trigger: GTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGCCCTTTTAACTGTTGCACCACACTGCCTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR GCA 72 bp GGAACCTGGAAGGAACAGGCAATGAGCTGGGTACACTaGCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAA +
Preference number: 3 (lower is better)
Translates to: GTWKEQAMSWVH*LSGRQCGATVK
Trigger: TTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCAGGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR CCA 72 bp ATCTTGCTGGACAGGAACAAAGCATGGCCCCACAAGTaGTTCTTCATGGCCCACTCCAAGGCTTCCTTCTTC +
Preference number: 3 (lower is better)
Translates to: ILLDRNKAWPHK*FFMAHSKASFF
Trigger: GAAGAAGGAAGCCTTGGAGTGGGCCATGAAGAACCACTTGTGGGGCCATGCTTTGTTCCTGTCCAGCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CAA 90 bp ATACAGCTCTGGGTCCCCAGCCTGATTCGACAGAATCACAGCCAAGTGAGGCCTTACTTCTCCAGCTTCTaGCAGTCTTGCATTAGCAGC +
Preference number: 3 (lower is better)
Translates to: IQLWVPSLIRQNHSQVRPYFSSF*QSCISS
Trigger: GCTGCTAATGCAAGACTGCAAGAAGCTGGAGAAGTA...AGGCCTCACTTGGCTGTGATTCTGTCGAATCAGGCTGGGGACCCAGAGCTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CAA 90 bp GGCTTCGATCGAAACCAGCTGAACCAGCCAAACCCTGAGCTCTTTGTATGCTCCAAGTGTTTTCTGTTGTaGTTCCTCCGGCTCCCGAAA +
Preference number: 3 (lower is better)
Translates to: GFDRNQLNQPNPELFVCSKCFLL*FLRLPK
Trigger: TTTCGGGAGCCGGAGGAACAACAACAGAAAACACTT...GGAGCATACAAAGAGCTCAGGGTTTGGCTGGTTCAGCTGGTTTCGATCGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR TCA 72 bp GTTTTCTGTTGTTGTTCCTCCGGCTCCCGAAATATCTaGGCGAGTAGGATGAGGATCCCCAATGTCTCCTGC +
Preference number: 3 (lower is better)
Translates to: VFCCCSSGSRNI*ASRMRIPNVSC
Trigger: GCAGGAGACATTGGGGATCCTCATCCTACTCGCTCAGATATTTCGGGAGCCGGAGGAACAACAACAGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR TCA 72 bp AGCCTCATCAGAGGACTCCTTCTCATCCTCCTTGGCTaGACTGGCGGAACTCTCAGAAATACTTCGTGGTCT +
Preference number: 3 (lower is better)
Translates to: SLIRGLLLILLG*TGGTLRNTSWS
Trigger: AGACCACGAAGTATTTCTGAGAGTTCCGCCAGTTCAGCCAAGGAGGATGAGAAGGAGTCCTCTGATGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 72 bp GCAGTAATGCAAAGCCTGGGACACGAGGCCATAATCTaGCAGACGGGAAGCATAAAGGAGCTTATACACCTG +
Preference number: 3 (lower is better)
Translates to: AVMQSLGHEAII*QTGSIKELIHL
Trigger: CAGGTGTATAAGCTCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATTACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR-3UTR CAA 90 bp CAATGTCTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATTTTCCGTCCTCTGGATaGCCTCAGTTGTTGCAAATT +
Preference number: 3 (lower is better)
Translates to: QCLLLPFAPAASEVALANFPSSG*PQLLQI
Trigger: AATTTGCAACAACTGAGGCAATCCAGAGGACGGAAA...ATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR GCA 72 bp CTGAGCTCTTTGTATGCTCCTTCCCATCTCCGAGCTTaGCTCTCTGGGCAGTATTTCGGGGAGAGTTTTTAT +
Preference number: 3 (lower is better)
Translates to: LSSLYAPSHLRA*LSGQYFGESFY
Trigger: ATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGATGGGAAGGAGCATACAAAGAGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CCA 72 bp TATCAGCCTCATCAGAGGACTCCTTCTCATCCTCCTTaGCTGAACTGGCGGAACTCTCAGAAATACTTCGTG +
Preference number: 3 (lower is better)
Translates to: YQPHQRTPSHPP*LNWRNSQKYFV
Trigger: CACGAAGTATTTCTGAGAGTTCCGCCAGTTCAGCCAAGGAGGATGAGAAGGAGTCCTCTGATGAGGCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CCA 72 bp TTTGTATGCTCCTTCCCATCTCCGAGCTTGCCTCTCTaGGCAGTATTTCGGGGAGAGTTTTTATCAGCCTCA +
Preference number: 3 (lower is better)
Translates to: FVCSFPSPSLPL*AVFRGEFLSAS
Trigger: TGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGATGGGAAGGAGCATACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR TCA 72 bp GAAGCTAATCTTAAGAGACTGAATTGTGCTGTGTCTTaGGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGG +
Preference number: 3 (lower is better)
Translates to: EANLKRLNCAVS*EILSSCLLSAR
Trigger: CCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAATTCAGTCTCTTAAGATTAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
3UTR TCA 72 bp CACACTTATTGTACATTTGGCACAGAAGGGATTCTTTaGCAAGCTAGCCATGTGCTATCAGAGACCAGGAAC +
Preference number: 3 (lower is better)
Translates to: HTYCTFGTEGIL*QASHVLSETRN
Trigger: GTTCCTGGTCTCTGATAGCACATGGCTAGCTTGTCAAAGAATCCCTTCTGTGCCAAATGTACAATAAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR-3UTR CAA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTAAATTTCAAAAACTCTaGACTGTGGCTGCTGCCCAG +
Preference number: 3 (lower is better)
Translates to: RVALTSRKVLVESVFCCCKFQKL*TVAAAQ
Trigger: CTGGGCAGCAGCCACAGTCAAGAGTTTTTGAAATTT...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR TCA 72 bp TCTGCATCATTAGGTTCAGTAGTTACCATGACAATATaGTGCCTACAGCAATCTAACTTGATAGCCACATGC +
Preference number: 3 (lower is better)
Translates to: SASLGSVVTMTI*CLQQSNLIATC
Trigger: GCATGTGGCTATCAAGTTAGATTGCTGTAGGCATCATATTGTCATGGTAACTACTGAACCTAATGATGCAGA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
3UTR TCA 72 bp ATAATTTCCATCATTGTGAAGCTAATCTTAAGAGACTaGATTGTGCTGTGTCTTGAGAGATCCTGTCCTCTT +
Preference number: 3 (lower is better)
Translates to: IISIIVKLILRD*IVLCLERSCPL
Trigger: AAGAGGACAGGATCTCTCAAGACACAGCACAATTCAGTCTCTTAAGATTAGCTTCACAATGATGGAAATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GCATCAGCCCACCTCTTTGCAGAGGAGGACCTGTGGCCTGAGGCCCCCGCCAATCCTACATGCACCAGCTaGCCTCCTGGCCCGAAACTC +
Preference number: 4 (lower is better)
Translates to: ASAHLFAEEDLWPEAPANPTCTS*PPGPKL
Trigger: GAGTTTCGGGCCAGGAGGTCAGCTGGTGCATGTAGG...ATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp GCATCAGCCCACCTCTTTGCAGAGGAGGACCTGTGGCCTGAGGCCCCCGCCAATTTGGCCACAGGGGGCTaGCGCTTGTACTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ASAHLFAEEDLWPEAPANLATGG*RLYFSS
Trigger: GCTGGAGAAGTACAAGCGGCAGCCCCCTGTGGCCAA...ATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCGCCTTCCCTCGTGTCTaGGGCAGCCTCTGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LSSCLLSARWRHRASTNLAFPRV*GSLWGA
Trigger: GGCTCCCCAGAGGCTGCCCCAGACACGAGGGAAGGC...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GCATCAGCCCACCTCTTTGCAGAGGAGGACCTGTGGCCTGAGGCCCCCGCCAATCTCCCCGACATGAGCTaGAAGAGGGTCTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: ASAHLFAEEDLWPEAPANLPDMS*KRVCSG
Trigger: CCCACTGCAGACCCTCTTCCAGCTCATGTCGGGGAG...ATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp AGCACTGGCCAGTCCTCATCGGTCAGGTTGATGAGGTTGGCCACAGGGGGCTGCTGGACTCCAAGCTGCTaGAGCTGGGGGATCATCCCG +
Preference number: 4 (lower is better)
Translates to: STGQSSSVRLMRLATGGCWTPSC*SWGIIP
Trigger: CGGGATGATCCCCCAGCTTCAGCAGCTTGGAGTCCA...GCAGCCCCCTGTGGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp GCTTTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGGGGGGATCTCTCCCGTaGGCAGGTTCGGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: ALQADCLDSESNSPTPSLGGSLP*AGSGSQ
Trigger: CTGGGACCCCGAACCTGCTCACGGGAGAGATCCCCC...CAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp TGCTGTAATGTGGGGCCCACGGGGCATCTCCTTGCACAGACCTGCACAGATAACGGAGGACCTGTGGCCTaGGGCCCCCGCCAATGCTGT +
Preference number: 4 (lower is better)
Translates to: CCNVGPTGHLLAQTCTDNGGPVA*GPRQCC
Trigger: ACAGCATTGGCGGGGGCCTCAGGCCACAGGTCCTCC...GTTATCTGTGCAGGTCTGTGCAAGGAGATGCCCCGTGGGCCCCACATTACAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp GAGCGCCAGCGTGCTGGTGAAGCCACTCATGACCCAGCTGTAGGTCTGTGGGTCGTCTCCAGCGGGGGATaGGTTCTTGGTGGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: ERQRAGEATHDPAVGLWVVSSGG*VLGGLR
Trigger: TCGAAGCCCACCAAGAACGCATCCCCCGCTGGAGAC...GACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp GAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACATGCTCCCCCGCTGGATaGGGATCCTCGGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: EILSSCLLSARWRHRASTCSPAG*GSSAFT
Trigger: GGTGAAGGCCGAGGATCCGCATCCAGCGGGGGAGCA...TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAAGCATGCCCAGCGCCCGCAGCTaGTCCCCCGCTGGATGCGGA +
Preference number: 4 (lower is better)
Translates to: HDPAVGLWVHLAGQEQSMPSARS*SPAGCG
Trigger: TCCGCATCCAGCGGGGGAGCAGCTGCGGGCGCTGGG...CATGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCAGGCTCCTGCTGTGGCTaGGGGCTCCCACGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPGSCCG*GLPRLS
Trigger: AGACAACCGTGGGAGCCCCCAGCCACAGCAGGAGCC...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GCATCAGCCCACCTCTTTGCAGAGGAGGACCTGTGGCCTGAGGCCCCCGCCAATACACGTGGCTGCCTGTaGAATCCTCCCCGACATGAG +
Preference number: 4 (lower is better)
Translates to: ASAHLFAEEDLWPEAPANTRGCL*NPPRHE
Trigger: CTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGT...ATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCACAGCTGCTCCCCCGCTaGATGCGGATCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPQLLPR*MRILGL
Trigger: AAGGCCGAGGATCCGCATCCAGCGGGGGAGCAGCTG...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
3UTR CAA 72 bp CCAGAGCTCAGCACTGGCCAGTCCTCATCGGTCAGGTaGATGAGGTTGGCCACAGGGGGCTGCCGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: PELSTGQSSSVR*MRLATGGCRLY
Trigger: GTACAAGCGGCAGCCCCCTGTGGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp AGGCTCTCAAGCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCGGGGGATCTCTCCCGTaGGCAGGTTCGGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RLSSHHHKCHHHVTLLMCGGSLP*AGSGSQ
Trigger: CTGGGACCCCGAACCTGCTCACGGGAGAGATCCCCC...GCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GCCACTCATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAGGGGGATCTCTCCCGTaGGCAGGTTCGGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: ATHDPAVGLWVHLAGQEQGGSLP*AGSGSQ
Trigger: CTGGGACCCCGAACCTGCTCACGGGAGAGATCCCCC...TTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp GCATCAGCCCACCTCTTTGCAGAGGAGGACCTGTGGCCTGAGGCCCCCGCCAATAGGGCACGTGAGCCATaGGATAGCAGAAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ASAHLFAEEDLWPEAPANRAREP*DSRSEL
Trigger: CAGCTCACTTCTGCTATCTCATGGCTCACGTGCCCT...ATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp AGTCAGGGCTGTCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTTGGTGGTCAACAAGGGCTGCTTaGCCGTCAGTGGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SQGCLRSPRLQRGMRSWWSTRAA*PSVGEL
Trigger: CAGCTCTCCCACTGACGGGCAAGCAGCCCTTGTTGA...CCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp ATACAGCTCTGGGTCCCCAGCCTGATTCGACAGAATCACAGCCAAGTGAGGCCTGCCTTCCCTCGTGTCTaGGGCAGCCTCTGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: IQLWVPSLIRQNHSQVRPAFPRV*GSLWGA
Trigger: GGCTCCCCAGAGGCTGCCCCAGACACGAGGGAAGGC...AGGCCTCACTTGGCTGTGATTCTGTCGAATCAGGCTGGGGACCCAGAGCTGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp GTCCCAGAGCTCAGCACTGGCCAGTCCTCATCGGTCAGGTTGATGAGGTTGGCCCCTTTGAGGGTGCTGTaGCCTTCCCTCGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VPELSTGQSSSVRLMRLAPLRVL*PSLVSG
Trigger: CCCAGACACGAGGGAAGGCCACAGCACCCTCAAAGG...GGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp GAGCGCCAGCGTGCTGGTGAAGCCACTCATGACCCAGCTGTAGGTCTGTGGGTCGAAGAGGGTCTGCAGTaGGTCATTGAGCGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: ERQRAGEATHDPAVGLWVEEGLQ*VIERQR
Trigger: ACGCTGGCGCTCAATGACCCACTGCAGACCCTCTTC...GACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp CGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGGGAGCAAACTCCAGACACAGGCTaGTGCCAGTCCCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RMGRGIERYRTGRASREQTPDTG*CQSPGL
Trigger: CAGGCCAGGGGACTGGCATCAGCCTGTGTCTGGAGT...TTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp GAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACACCTACATGCACCAGCTaGCCTCCTGGCCCGAAACTC +
Preference number: 4 (lower is better)
Translates to: EILSSCLLSARWRHRASTPTCTS*PPGPKL
Trigger: GAGTTTCGGGCCAGGAGGTCAGCTGGTGCATGTAGG...TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GCTAGTGGCCGTGGGCAGCTGAGGCACCTGAGATGGGTTGTAAAGAGGAACAGCCCTACATGCACCAGCTaGCCTCCTGGCCCGAAACTC +
Preference number: 4 (lower is better)
Translates to: ASGRGQLRHLRWVVKRNSPTCTS*PPGPKL
Trigger: GAGTTTCGGGCCAGGAGGTCAGCTGGTGCATGTAGG...GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp GAGCGCCAGCGTGCTGGTGAAGCCACTCATGACCCAGCTGTAGGTCTGTGGGTCACTAATAGCACAGGGTaGCTGCTCTCTCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ERQRAGEATHDPAVGLWVTNSTG*LLSPWL
Trigger: GAGCCAGGGAGAGAGCAGTCACCCTGTGCTATTAGT...GACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp GCATCAGCCCACCTCTTTGCAGAGGAGGACCTGTGGCCTGAGGCCCCCGCCAATGAGACATCTTCAGCCTaGACTGGACTCCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ASAHLFAEEDLWPEAPANETSSA*TGLQAA
Trigger: AGCAGCTTGGAGTCCAGTTCAGGCTGAAGATGTCTC...ATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp AGTCAGGGCTGTCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTTGGTGGCAGTTCAACAAGGGCTaGTTGCCCGTCAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SQGCLRSPRLQRGMRSWWQFNKG*LPVSGR
Trigger: TCTCCCACTGACGGGCAAGCAGCCCTTGTTGAACTG...CCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp TCTCCGAGCTTGCCTCTCTGGGCAGTATTTCGGGGAGAGTTTTTATCAGCCTCACCCTGCACCCCCTCCTaGTGGGTAGGAGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SPSLPLWAVFRGEFLSASPCTPS*WVGARL
Trigger: CAGCCGGGCTCCTACCCAGCAGGAGGGGGTGCAGGG...TGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCAGTCTCCAGCGGGGGATaGGTTCTTGGTGGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPVSSGG*VLGGLR
Trigger: TCGAAGCCCACCAAGAACGCATCCCCCGCTGGAGAC...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp GCCACTCATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAATGCTCCCCCGCTGGATaGGGATCCTCGGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: ATHDPAVGLWVHLAGQEQCSPAG*GSSAFT
Trigger: GGTGAAGGCCGAGGATCCGCATCCAGCGGGGGAGCA...TTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp AGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATCGTTCTGGCCTTCCCTCGTGTCTaGGGCAGCCTCTGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RGIERYRTGRASREQIVLAFPRV*GSLWGA
Trigger: GGCTCCCCAGAGGCTGCCCCAGACACGAGGGAAGGC...CAGAACGATTTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACGGCTCCTGCTGTGGCTaGGGGCTCCCACGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LQADCLDSESNSPTPSLYGSCCG*GLPRLS
Trigger: AGACAACCGTGGGAGCCCCCAGCCACAGCAGGAGCC...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp TGCTGCCAGTCCCTGGTAGATGGGTCTCAGGAACTGAGTAAAAAGGCCTCGGTGGGCTCCTGCTGTGGCTaGGGGCTCCCACGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: CCQSLVDGSQELSKKASVGSCCG*GLPRLS
Trigger: AGACAACCGTGGGAGCCCCCAGCCACAGCAGGAGCC...CACCGAGGCCTTTTTACTCAGTTCCTGAGACCCATCTACCAGGGACTGGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCAGCCAGTCCCCTGGCCTaGATGCATAATGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPASPLA*MHNGAA
Trigger: AGCAGCCCCATTATGCATCCAGGCCAGGGGACTGGC...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGTCTGCTATTGCACCCCCTCCTGCTaGGTAGGAGCCCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ATTISATTMSLCSCAVCYCTPSC*VGARLE
Trigger: CTCCAGCCGGGCTCCTACCCAGCAGGAGGGGGTGCA...ATAGCAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp AGGAAACACTCTCTGGTCCAGACAAGCCTCCAACCCCAGCGCCCGCAGCTGCTCGGGATGCGTTCTTGGTaGGCTTCGATCGAAACCAGC +
Preference number: 4 (lower is better)
Translates to: RKHSLVQTSLQPQRPQLLGMRSW*ASIETS
Trigger: GCTGGTTTCGATCGAAGCCCACCAAGAACGCATCCC...GAGCAGCTGCGGGCGCTGGGGTTGGAGGCTTGTCTGGACCAGAGAGTGTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp GTCCCAGAGCTCAGCACTGGCCAGTCCTCATCGGTCAGGTTGATGAGGTTGGCCCGGGGGATGCGTTCTTaGTGGGCTTCGATCGAAACC +
Preference number: 4 (lower is better)
Translates to: VPELSTGQSSSVRLMRLARGMRS*WASIET
Trigger: GGTTTCGATCGAAGCCCACCAAGAACGCATCCCCCG...GGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CAA 72 bp TCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTaGGTGGGCTTCGATCGAAACCAGCTGAACCAGCCA +
Preference number: 4 (lower is better)
Translates to: SEESSSPAGDAF*VGFDRNQLNQP
Trigger: TGGCTGGTTCAGCTGGTTTCGATCGAAGCCCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp AGGCTCTCAAGCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCACTCCAGACACAGGCTaGTGCCAGTCCCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RLSSHHHKCHHHVTLLMCTPDTG*CQSPGL
Trigger: CAGGCCAGGGGACTGGCATCAGCCTGTGTCTGGAGT...GCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCCATAGCTGCTGGAGCTaGGACCAGACTCACGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSSCLLSARWRHRASTNLHSCWS*DQTHAA
Trigger: AGCAGCGTGAGTCTGGTCTCAGCTCCAGCAGCTATG...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GCTAGTGGCCGTGGGCAGCTGAGGCACCTGAGATGGGTTGTAAAGAGGAACAGCGAATCCTCCCCGACATaGGCTGGAAGAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ASGRGQLRHLRWVVKRNSESSPT*AGRGSA
Trigger: TGCAGACCCTCTTCCAGCTCATGTCGGGGAGGATTC...GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCAGAATCACAGCCAAGTaGGGCCTCCAGTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LSSCLLSARWRHRASTNLRITAK*GLQSPH
Trigger: GTGGGGAGACTGGAGGCCTCACTTGGCTGTGATTCT...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAGGGCGGCCCAGCATCTaGCAGTACTCGAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: EILSSCLLSARWRHRASTGRPSI*QYSKIS
Trigger: GGAAATCTTCGAGTACTGTCAGATGCTGGGCCGCCC...TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCCCTGGAAAGAAGGGATaGAGGATTTGGGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSSCLLSARWRHRASTNLPGKKG*RIWGGP
Trigger: TGGGCCGCCCCAAATCCTTCATCCCTTCTTTCCAGG...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp TTTTCTCCACAACACGTGGCTGCCTGTGGAATCCTCCCCGACATGAGCTGGAAGTGTCAGCCACAGAGCTaGGCGGTACCCAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: FSPQHVAACGILPDMSWKCQPQS*AVPRGF
Trigger: GAAGCCCCTGGGTACCGCTCAGCTCTGTGGCTGACA...CTTCCAGCTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp GCCACTCATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAAGTGGCCTCTGTCACTaGCACGCTGCTGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: ATHDPAVGLWVHLAGQEQSGLCH*HAAASP
Trigger: GGGACTGGCAGCAGCGTGGCAGTGACAGAGGCCACT...TTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp AGTCAGGGCTGTCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTTGGTGGTCCCATCTCCGAGCTTaGCTCTCTGGGCAGTATTTC +
Preference number: 4 (lower is better)
Translates to: SQGCLRSPRLQRGMRSWWSHLRA*LSGQYF
Trigger: GAAATACTGCCCAGAGAGGCAAGCTCGGAGATGGGA...CCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCCTGGTGGGGAGAAGATaGTCTGGGGGTCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LSSCLLSARWRHRASTNLLVGRR*SGGLLR
Trigger: TCTGAGGAGACCCCCAGAGCATCTTCTCCCCACCAG...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCCTGATGCCAGTCCCCTaGCCTGGATGCATAATGGGG +
Preference number: 4 (lower is better)
Translates to: LSSCLLSARWRHRASTNLLMPVP*PGCIMG
Trigger: CCCCATTATGCATCCAGGCCAGGGGACTGGCATCAG...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp AGTCAGGGCTGTCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTTGGTGGCCAGACTCACGCTGCTaGAGAAGGTTGGACTCACTA +
Preference number: 4 (lower is better)
Translates to: SQGCLRSPRLQRGMRSWWPDSRC*RRLDSL
Trigger: TAGTGAGTCCAACCTTCTCCAGCAGCGTGAGTCTGG...CCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCCGTCAGTGGGAGAGCTaGGACCTACATGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: LSSCLLSARWRHRASTNLRQWES*DLHAPA
Trigger: AGCTGGTGCATGTAGGTCCCAGCTCTCCCACTGACG...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GCATCAGCCCACCTCTTTGCAGAGGAGGACCTGTGGCCTGAGGCCCCCGCCAATACCATGGACCCATTCTaGCGACAAAGGAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: ASAHLFAEEDLWPEAPANTMDPF*RQRRTK
Trigger: CTTGGTTCTCCTTTGTCGCCAGAATGGGTCCATGGT...ATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp GCTAGTGGCCGTGGGCAGCTGAGGCACCTGAGATGGGTTGTAAAGAGGAACAGCACACGTGGCTGCCTGTaGAATCCTCCCCGACATGAG +
Preference number: 4 (lower is better)
Translates to: ASGRGQLRHLRWVVKRNSTRGCL*NPPRHE
Trigger: CTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGT...GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp AATGCAAAGCCTGGGACACGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGATGCACCCCCTCCTGCTaGGTAGGAGCCCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NAKPGTRGHNLPDGKHKGCTPSC*VGARLE
Trigger: CTCCAGCCGGGCTCCTACCCAGCAGGAGGGGGTGCA...TCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCAAACATCCGGCAGAGGTaGGGACTCAGGGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPNIRQR*GLRGRC
Trigger: ACACCTTCCCCTGAGTCCCCACCTCTGCCGGATGTT...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTGCAGAGGAGGACCTGTaGCCTGAGGCCCCCGCCAAT +
Preference number: 4 (lower is better)
Translates to: LLTRMGRGIERYRTGRASAEEDL*PEAPAN
Trigger: ATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGC...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp CAATGTCTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATACTCCAGACACAGGCTaGTGCCAGTCCCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QCLLLPFAPAASEVALANTPDTG*CQSPGL
Trigger: CAGGCCAGGGGACTGGCATCAGCCTGTGTCTGGAGT...ATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp TGCTGTAATGTGGGGCCCACGGGGCATCTCCTTGCACAGACCTGCACAGATAACAGAATCACAGCCAAGTaGGGCCTCCAGTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: CCNVGPTGHLLAQTCTDNRITAK*GLQSPH
Trigger: GTGGGGAGACTGGAGGCCTCACTTGGCTGTGATTCT...GTTATCTGTGCAGGTCTGTGCAAGGAGATGCCCCGTGGGCCCCACATTACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp GAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAACTAATAGCACAGGGTaGCTGCTCTCTCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EILSSCLLSARWRHRASTTNSTG*LLSPWL
Trigger: GAGCCAGGGAGAGAGCAGTCACCCTGTGCTATTAGT...TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGTCTGCTATTGTCAGCCACAGAGCTaGGCGGTACCCAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: ATTISATTMSLCSCAVCYCQPQS*AVPRGF
Trigger: GAAGCCCCTGGGTACCGCTCAGCTCTGTGGCTGACA...ATAGCAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp AGTCAGGGCTGTCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTTGGTGGTCTGTGGTTTGGAAATaGCCTCTTGGCCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: SQGCLRSPRLQRGMRSWWSVVWK*PLGHQE
Trigger: CTCCTGATGGCCAAGAGGTCATTTCCAAACCACAGA...CCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp AGGCTCTCAAGCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGAGTCAGGGCTGTCTaGGGAGTCCTCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RLSSHHHKCHHHVTLLMCRVRAV*GVLVSS
Trigger: GCTGGAGACGAGGACTCCTCAGACAGCCCTGACTCT...GCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp TCTCCGAGCTTGCCTCTCTGGGCAGTATTTCGGGGAGAGTTTTTATCAGCCTCAAGGGGAAGGTGTCAGTaGGAGGCCCAGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SPSLPLWAVFRGEFLSASRGRCQ*EAQASL
Trigger: CAGGCTGGCCTGGGCCTCTCACTGACACCTTCCCCT...TGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCGGCACTCTTTCTTCCTaGAGCCACTGTGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LSSCLLSARWRHRASTNLGTLSS*SHCGCP
Trigger: TGGACACCCACAGTGGCTGCAGGAAGAAAGAGTGCC...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp GCTTTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTCAACAAGGGCTGCTTaGCCGTCAGTGGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ALQADCLDSESNSPTPSLSTRAA*PSVGEL
Trigger: CAGCTCTCCCACTGACGGGCAAGCAGCCCTTGTTGA...CAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp GCTTTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGAGCTGGAAGAGGGTCTaGAGTGGGTCATTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: ALQADCLDSESNSPTPSLSWKRV*SGSLSA
Trigger: GGCGCTCAATGACCCACTGCAGACCCTCTTCCAGCT...CAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp GTCCCAGAGCTCAGCACTGGCCAGTCCTCATCGGTCAGGTTGATGAGGTTGGCCCTGGCTCAAGACAGCTaGACCAATGGCTTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: VPELSTGQSSSVRLMRLALAQDS*TNGFAV
Trigger: TACTGCGAAGCCATTGGTGCAGCTGTCTTGAGCCAG...GGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp CTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATCTGGCTAGCTGCCTCCGAAGTTaGGCTAGCCAATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LLLPFAPAASEVALANLASCLRS*ASQSGS
Trigger: GGAGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCT...AGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp GAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAACCTTTTGCTCCAGCTaGCTCCGAAGTTGCGCTAGC +
Preference number: 4 (lower is better)
Translates to: EILSSCLLSARWRHRASTTFCSS*LRSCAS
Trigger: GCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGT...TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATCTGGCTCTGTCACTGCCACGCTaGTGCCAGTCCCTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: LLLPFAPAASEVALANLALSLPR*CQSLVD
Trigger: ATCTACCAGGGACTGGCAGCAGCGTGGCAGTGACAG...AGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACCCTTTGAGGGTGCTGTaGCCTTCCCTCGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LQADCLDSESNSPTPSLYPLRVL*PSLVSG
Trigger: CCCAGACACGAGGGAAGGCCACAGCACCCTCAAAGG...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp CGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGGGAGCAACTGATGCCAGTCCCCTaGCCTGGATGCATAATGGGG +
Preference number: 4 (lower is better)
Translates to: RMGRGIERYRTGRASREQLMPVP*PGCIMG
Trigger: CCCCATTATGCATCCAGGCCAGGGGACTGGCATCAG...TTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp GCTTTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGGAAGAGGGTCTGCAGTaGGTCATTGAGCGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: ALQADCLDSESNSPTPSLEEGLQ*VIERQR
Trigger: ACGCTGGCGCTCAATGACCCACTGCAGACCCTCTTC...CAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp ATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCCGAGCTTGCCTCTCTaGGCAGTATTTCGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ILSSCLLSARWRHRASTNPSLPL*AVFRGE
Trigger: CTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGG...GTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCAGGGATGCGTTCTTGGTaGGCTTCGATCGAAACCAGC +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPGMRSW*ASIETS
Trigger: GCTGGTTTCGATCGAAGCCCACCAAGAACGCATCCC...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTCATAGCTGCTGGAGCTaGGACCAGACTCACGCTGCT +
Preference number: 4 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGHSCWS*DQTHAA
Trigger: AGCAGCGTGAGTCTGGTCTCAGCTCCAGCAGCTATG...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp TTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGTGGACTCCAAGCTGCTaGAGCTGGGGGATCATCCCG +
Preference number: 4 (lower is better)
Translates to: LCCVLRDPVLLPSKCPVEWTPSC*SWGIIP
Trigger: CGGGATGATCCCCCAGCTTCAGCAGCTTGGAGTCCA...CTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTTGGACTCCAAGCTGCTaGAGCTGGGGGATCATCCCG +
Preference number: 4 (lower is better)
Translates to: LLTRMGRGIERYRTGRASWTPSC*SWGIIP
Trigger: CGGGATGATCCCCCAGCTTCAGCAGCTTGGAGTCCA...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACGCAACAATCGCACGCTaGTACAGCTCTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LQADCLDSESNSPTPSLYATIAR*YSSGSP
Trigger: TGGGGACCCAGAGCTGTATCAGCGTGCGATTGTTGC...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp TTTTCTCCACAACACGTGGCTGCCTGTGGAATCCTCCCCGACATGAGCTGGAAGGCAACAATCGCACGCTaGTACAGCTCTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: FSPQHVAACGILPDMSWKATIAR*YSSGSP
Trigger: TGGGGACCCAGAGCTGTATCAGCGTGCGATTGTTGC...CTTCCAGCTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp GCCACTCATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAGGGCGGCCCAGCATCTaGCAGTACTCGAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: ATHDPAVGLWVHLAGQEQGRPSI*QYSKIS
Trigger: GGAAATCTTCGAGTACTGTCAGATGCTGGGCCGCCC...TTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp GCCAATGGTGTCTGTGGTTTGGAAATGACCTCTTGGCCATCAGGAGGCTGGGAAAGAGTCAGGGCTGTCTaGGGAGTCCTCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ANGVCGLEMTSWPSGGWERVRAV*GVLVSS
Trigger: GCTGGAGACGAGGACTCCTCAGACAGCCCTGACTCT...TTCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAAACCACAGACACCATTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCATTCAGTCCTGGGAGATaGGCCTGGGACGTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPFSPGR*AWDVCL
Trigger: TAAACACACGTCCCAGGCTCATCTCCCAGGACTGAA...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GCTTTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTGCTTTGGGACCAGCTaGGGAGACATCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ALQADCLDSESNSPTPSLCFGTS*GDIFSL
Trigger: CAGGCTGAAGATGTCTCCTCAGCTGGTCCCAAAGCA...CAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp CGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGGGAGCAAGGAAGGAACAGGCAATaGGCTGGGTACACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: RMGRGIERYRTGRASREQGRNRQ*AGYTAS
Trigger: TGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCC...TTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp AGGAAACACTCTCTGGTCCAGACAAGCCTCCAACCCCAGCGCCCGCAGCTGCTCTTTGCAGCTCTGAGCTaGTTTCTGCTGGCAAAACGT +
Preference number: 4 (lower is better)
Translates to: RKHSLVQTSLQPQRPQLLFAALS*FLLAKR
Trigger: ACGTTTTGCCAGCAGAAAGCAGCTCAGAGCTGCAAA...GAGCAGCTGCGGGCGCTGGGGTTGGAGGCTTGTCTGGACCAGAGAGTGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp CAATGTCTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATTTGGCCACAGGGGGCTaGCGCTTGTACTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QCLLLPFAPAASEVALANLATGG*RLYFSS
Trigger: GCTGGAGAAGTACAAGCGGCAGCCCCCTGTGGCCAA...ATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGACATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp GCCACTCATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAAGCTGGAAGAGGGTCTaGAGTGGGTCATTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: ATHDPAVGLWVHLAGQEQSWKRV*SGSLSA
Trigger: GGCGCTCAATGACCCACTGCAGACCCTCTTCCAGCT...TTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp CGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATAGCAGAAGTGAGCTaGCTCCACAAGCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RMGRGIERYRTGRASREQIAEVS*LHKPLP
Trigger: GGGAAGGGGCTTGTGGAGGCAGCTCACTTCTGCTAT...TTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCACTCTTGACTGTGGCTaGTGCCCAGCAAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: LSSCLLSARWRHRASTNLTLDCG*CPARPD
Trigger: ATCTGGTCTTGCTGGGCAGCAGCCACAGTCAAGAGT...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCATAGCACAGGGTGACTaGTCTCTCCCTGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LSSCLLSARWRHRASTNLIAQGD*SLPGSR
Trigger: TCTTGAGCCAGGGAGAGAGCAGTCACCCTGTGCTAT...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCACTGCTTCCCATTTCTTaGTACAGGGCCCTGCGGTAT +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPLLPIS*YRALRY
Trigger: ATACCGCAGGGCCCTGTAGCAAGAAATGGGAAGCAG...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTATCAGCCCACCTCTTTaGAGAGGAGGACCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGISPPL*RGGPVA
Trigger: GGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGAT...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTGAACAGGCCCAGGGCTaGCTAACACGGACCCACAAG +
Preference number: 4 (lower is better)
Translates to: LLTRMGRGIERYRTGRASEQAQG*LTRTHK
Trigger: CTTGTGGGTCCGTGTTAGGCAGCCCTGGGCCTGTTC...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp GGCCCAGGGCTGCCTAACACGGACCCACAAGCCTCCACATGTAAAATGTTGTTTGTCTGGGGCAGCCTCTaGGGAGCCCAAAGTTCCATC +
Preference number: 4 (lower is better)
Translates to: GPGLPNTDPQASTCKMLFVWGSL*GAQSSI
Trigger: GATGGAACTTTGGGCTCCCCAGAGGCTGCCCCAGAC...AAACAACATTTTACATGTGGAGGCTTGTGGGTCCGTGTTAGGCAGCCCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp GCCACTCATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAACTGATGCCAGTCCCCTaGCCTGGATGCATAATGGGG +
Preference number: 4 (lower is better)
Translates to: ATHDPAVGLWVHLAGQEQLMPVP*PGCIMG
Trigger: CCCCATTATGCATCCAGGCCAGGGGACTGGCATCAG...TTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTCACCAGCTGACCTCCTaGCCCGAAACTCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGHQLTS*PETHRN
Trigger: GTTCCTGTGAGTTTCGGGCCAGGAGGTCAGCTGGTG...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp GGCCCAGGGCTGCCTAACACGGACCCACAAGCCTCCACATGTAAAATGTTGTTTCCCAGAGCTCAGCACTaGCCAGTCCTCATCGGTCAG +
Preference number: 4 (lower is better)
Translates to: GPGLPNTDPQASTCKMLFPRAQH*PVLIGQ
Trigger: CTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGG...AAACAACATTTTACATGTGGAGGCTTGTGGGTCCGTGTTAGGCAGCCCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp CTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATCTGGCTCCAGCTGTAGGTCTGTaGGTCCATCTTGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: LLLPFAPAASEVALANLAPAVGL*VHLAGQ
Trigger: CTGTCCAGCAAGATGGACCCACAGACCTACAGCTGG...AGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp AGGGCCCTAATTTCCCCAAGGCTCTCAAGCCACCACCATAAGTGCCACCACCATGAAGAGGGTCTGCAGTaGGTCATTGAGCGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: RALISPRLSSHHHKCHHHEEGLQ*VIERQR
Trigger: ACGCTGGCGCTCAATGACCCACTGCAGACCCTCTTC...ATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCTTGGGGAAATTAGGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAAGCATGCTCCCCGACATGAGCTaGAAGAGGGTCTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HDPAVGLWVHLAGQEQSMLPDMS*KRVCSG
Trigger: CCCACTGCAGACCCTCTTCCAGCTCATGTCGGGGAG...CATGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCATTTCTCCACAACACGTaGCTGCCTGTGGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPFLHNT*LPVESS
Trigger: GGAGGATTCCACAGGCAGCCACGTGTTGTGGAGAAA...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATCTGGCTCCAGGGTGTCCCCAATaGCAACAATCGCACGCTGAT +
Preference number: 4 (lower is better)
Translates to: LLLPFAPAASEVALANLAPGCPQ*QQSHAD
Trigger: ATCAGCGTGCGATTGTTGCCATTGGGGACACCCTGG...AGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCACCTTCTCATCCTCCTTaGCTGAACTGGCGGAACTCT +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPPSHPP*LNWRNS
Trigger: AGAGTTCCGCCAGTTCAGCCAAGGAGGATGAGAAGG...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GGTTGTAAAGAGGAACAGCCCCTTTTAAGGCAGGTGGAGGAAGAAGAACACCAGCAGCTGCTCCCCCGCTaGATGCGGATCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: GCKEEQPLLRQVEEEEHQQLLPR*MRILGL
Trigger: AAGGCCGAGGATCCGCATCCAGCGGGGGAGCAGCTG...CTGGTGTTCTTCTTCCTCCACCTGCCTTAAAAGGGGCTGTTCCTCTTTACAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp AGGGCCCTAATTTCCCCAAGGCTCTCAAGCCACCACCATAAGTGCCACCACCATCTCAGCATGGCTGGGTaGGATAGCGACGCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: RALISPRLSSHHHKCHHHLSMAG*DSDAEL
Trigger: TAGCTCAGCGTCGCTATCCCACCCAGCCATGCTGAG...ATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCTTGGGGAAATTAGGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GGCCCAGGGCTGCCTAACACGGACCCACAAGCCTCCACATGTAAAATGTTGTTTGCCAATGCTGTAATGTaGGGCCCACGGGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GPGLPNTDPQASTCKMLFANAVM*GPRGIS
Trigger: GGAGATGCCCCGTGGGCCCCACATTACAGCATTGGC...AAACAACATTTTACATGTGGAGGCTTGTGGGTCCGTGTTAGGCAGCCCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp ATACAGCTCTGGGTCCCCAGCCTGATTCGACAGAATCACAGCCAAGTGAGGCCTGAGGAGACATCAGCCTaGACTGGACTCCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IQLWVPSLIRQNHSQVRPEETSA*TGLQAA
Trigger: AGCAGCTTGGAGTCCAGTTCAGGCTGATGTCTCCTC...AGGCCTCACTTGGCTGTGATTCTGTCGAATCAGGCTGGGGACCCAGAGCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp TTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGAATCCTCCCCGACATaGGCTGGAAGAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LCCVLRDPVLLPSKCPVEESSPT*AGRGSA
Trigger: TGCAGACCCTCTTCCAGCTCATGTCGGGGAGGATTC...CTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGTCTGCTATGCAACAATCGCACGCTaGTACAGCTCTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ATTISATTMSLCSCAVCYATIAR*YSSGSP
Trigger: TGGGGACCCAGAGCTGTATCAGCGTGCGATTGTTGC...ATAGCAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp CTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATCTGGCTGGCTCCCGAAATATCTaGGCGAGTAGGATGAGGATC +
Preference number: 4 (lower is better)
Translates to: LLLPFAPAASEVALANLAGSRNI*ASRMRI
Trigger: GATCCTCATCCTACTCGCTCAGATATTTCGGGAGCC...AGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp GAGACTGAATTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCAGGGGAAGGTGTCAGTaGGAGGCCCAGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ETELCCVLRDPVLLPSKCRGRCQ*EAQASL
Trigger: CAGGCTGGCCTGGGCCTCTCACTGACACCTTCCCCT...GCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAATTCAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GCATCAGCCCACCTCTTTGCAGAGGAGGACCTGTGGCCTGAGGCCCCCGCCAATCCTCACTGTACCATCTaGGACAAGTTATTTCATCTC +
Preference number: 4 (lower is better)
Translates to: ASAHLFAEEDLWPEAPANPHCTI*DKLFHL
Trigger: GAGATGAAATAACTTGTCTCAGATGGTACAGTGAGG...ATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp GCTTTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGAGACCAGACTCACGCTaGTGGAGAAGGTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: ALQADCLDSESNSPTPSLRPDSR*WRRLDS
Trigger: TGAGTCCAACCTTCTCCAGCAGCGTGAGTCTGGTCT...CAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCAATTTCTCCACGATCTaGGCAGGTGTCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: LSSCLLSARWRHRASTNLNFSTI*AGVSTL
Trigger: CAGTGTGGAGACACCTGCGCAGATCGTGGAGAAATT...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp GGCTTCGATCGAAACCAGCTGAACCAGCCAAACCCTGAGCTCTTTGTATGCTCCTCCACAACACGTGGCTaGCTGTGGAATCCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: GFDRNQLNQPNPELFVCSSTTRG*LWNPPR
Trigger: TCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGA...GGAGCATACAAAGAGCTCAGGGTTTGGCTGGTTCAGCTGGTTTCGATCGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCCACGAGGCCATAATCTaGCAGACGGGAAGCATAAAG +
Preference number: 4 (lower is better)
Translates to: LSSCLLSARWRHRASTNLHEAII*QTGSIK
Trigger: CTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTG...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp GCCACTCATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAACCTTTTGCTCCAGCTaGCTCCGAAGTTGCGCTAGC +
Preference number: 4 (lower is better)
Translates to: ATHDPAVGLWVHLAGQEQTFCSS*LRSCAS
Trigger: GCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGT...TTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp AATGCAAAGCCTGGGACACGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGATCACTGCCACGCTGCTaGCAGTCCCTGGTAGATGGG +
Preference number: 4 (lower is better)
Translates to: NAKPGTRGHNLPDGKHKGSLPRC*QSLVDG
Trigger: CCCATCTACCAGGGACTGGCAGCAGCGTGGCAGTGA...TCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp GCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGTCTGCTATCTGTCACTGCCACGCTaGTGCCAGTCCCTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: ATTISATTMSLCSCAVCYLSLPR*CQSLVD
Trigger: ATCTACCAGGGACTGGCAGCAGCGTGGCAGTGACAG...ATAGCAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAAGCATGGGGCCCAGGTGTGTCTaGAGCATTTCCTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: HDPAVGLWVHLAGQEQSMGPRCV*SISSQT
Trigger: AGTCTGGGAGGAAATGCTGCAGACACACCTGGGCCC...CATGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CAATGTCTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATCACCAGCTGACCTCCTaGCCCGAAACTCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: QCLLLPFAPAASEVALANHQLTS*PETHRN
Trigger: GTTCCTGTGAGTTTCGGGCCAGGAGGTCAGCTGGTG...ATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp GGCTTCGATCGAAACCAGCTGAACCAGCCAAACCCTGAGCTCTTTGTATGCTCCCGTCAGTGGGAGAGCTaGGACCTACATGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: GFDRNQLNQPNPELFVCSRQWES*DLHAPA
Trigger: AGCTGGTGCATGTAGGTCCCAGCTCTCCCACTGACG...GGAGCATACAAAGAGCTCAGGGTTTGGCTGGTTCAGCTGGTTTCGATCGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp GAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAACCATGGACCCATTCTaGCGACAAAGGAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: EILSSCLLSARWRHRASTTMDPF*RQRRTK
Trigger: CTTGGTTCTCCTTTGTCGCCAGAATGGGTCCATGGT...TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAGACAGGAACAAAGCATaGCCCCACAAGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: EILSSCLLSARWRHRASTDRNKA*PHKWFF
Trigger: GAAGAACCACTTGTGGGGCCATGCTTTGTTCCTGTC...TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GAGCGCCAGCGTGCTGGTGAAGCCACTCATGACCCAGCTGTAGGTCTGTGGGTCAAGATTTCCGTCCTCTaGATTGCCTCAGTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: ERQRAGEATHDPAVGLWVKISVL*IASVVA
Trigger: TGCAACAACTGAGGCAATCCAGAGGACGGAAATCTT...GACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp GCTAGTGGCCGTGGGCAGCTGAGGCACCTGAGATGGGTTGTAAAGAGGAACAGCTTGGAAATGACCTCTTaGCCATCAGGAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: ASGRGQLRHLRWVVKRNSLEMTS*PSGGWE
Trigger: TTCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAA...GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp AGGAAACACTCTCTGGTCCAGACAAGCCTCCAACCCCAGCGCCCGCAGCTGCTCTGGTCTAGCAGCCAATaGTGTCTGTGGTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: RKHSLVQTSLQPQRPQLLWSSSQ*CLWFGN
Trigger: ATTTCCAAACCACAGACACCATTGGCTGCTAGACCA...GAGCAGCTGCGGGCGCTGGGGTTGGAGGCTTGTCTGGACCAGAGAGTGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAAGCATGCCGAGCTTGCCTCTCTaGGCAGTATTTCGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HDPAVGLWVHLAGQEQSMPSLPL*AVFRGE
Trigger: CTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGG...CATGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp GCTTTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGGAACAGGCAATGAGCTaGGTACACTGCCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ALQADCLDSESNSPTPSLEQAMS*VHCLSG
Trigger: ACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTC...CAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCATTGTCTTGCCATTGGTaGAACCTCTCTCCATTGTGC +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPLSCHW*NLSPLC
Trigger: GCACAATGGAGAGAGGTTTCACCAATGGCAAGACAA...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCGGACTCACTAGCCAATaGTGGCTTATTTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSSCLLSARWRHRASTNLGLTSQ*WLIFLG
Trigger: GCCCAGAAAAATAAGCCATCATTGGCTAGTGAGTCC...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACACCTAATCAAGGGTCCTaGGAAACTTCTCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: EILSSCLLSARWRHRASTPNQGS*ETSHLL
Trigger: GAGGAGATGAGAAGTTTCTCAGGACCCTTGATTAGG...TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GCTTTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTCAGATTTGCAGCTCTaGGCTGCTTTCTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: ALQADCLDSESNSPTPSLSDLQL*AAFCWQ
Trigger: TTGCCAGCAGAAAGCAGCTCAGAGCTGCAAATCTGA...CAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp AATGCAAAGCCTGGGACACGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGAAGAATCACAGCCAAGTaGGGCCTCCAGTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: NAKPGTRGHNLPDGKHKGRITAK*GLQSPH
Trigger: GTGGGGAGACTGGAGGCCTCACTTGGCTGTGATTCT...TCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCAAATTTCAAAAACTCTTaGCTGTGGCTGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPNFKNS*LWLLPS
Trigger: GCTGGGCAGCAGCCACAGTCAAGAGTTTTTGAAATT...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTTCATTCACTGAGAGCTaGTTGAGGGCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLTRMGRGIERYRTGRASSFTES*LRASCR
Trigger: CCTGCAGGAGGCCCTCAATCAGCTCTCAGTGAATGA...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp GCTAGTGGCCGTGGGCAGCTGAGGCACCTGAGATGGGTTGTAAAGAGGAACAGCTGCTATATCCCATCATaGCAGCCTGCTGTTACTCAC +
Preference number: 4 (lower is better)
Translates to: ASGRGQLRHLRWVVKRNSCYIPS*QPAVTH
Trigger: GTGAGTAACAGCAGGCTGTCATGATGGGATATAGCA...GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTGGCACTCTTTCTTCCTaGAGCCACTGTGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LLTRMGRGIERYRTGRASGTLSS*SHCGCP
Trigger: TGGACACCCACAGTGGCTGCAGGAAGAAAGAGTGCC...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp TTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGCAGTTCAACAAGGGCTaGTTGCCCGTCAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LCCVLRDPVLLPSKCPVEQFNKG*LPVSGR
Trigger: TCTCCCACTGACGGGCAAGCAGCCCTTGTTGAACTG...CTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp GGCCCAGGGCTGCCTAACACGGACCCACAAGCCTCCACATGTAAAATGTTGTTTCAGTTCAACAAGGGCTaGTTGCCCGTCAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GPGLPNTDPQASTCKMLFQFNKG*LPVSGR
Trigger: TCTCCCACTGACGGGCAAGCAGCCCTTGTTGAACTG...AAACAACATTTTACATGTGGAGGCTTGTGGGTCCGTGTTAGGCAGCCCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCACCAGTGTCTCAGATTTaGAGCTCTGAGCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPPVSQI*SSELLS
Trigger: AGAAAGCAGCTCAGAGCTGCAAATCTGAGACACTGG...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp GAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAGCTTCTTGCAGTCTTaGATTAGCAGCTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: EILSSCLLSARWRHRASTSFLQS*ISSSAM
Trigger: CATCGCTGAGCTGCTAATGCAAGACTGCAAGAAGCT...TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CAATGTCTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATATAGCAGAAGTGAGCTaGCTCCACAAGCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: QCLLLPFAPAASEVALANIAEVS*LHKPLP
Trigger: GGGAAGGGGCTTGTGGAGGCAGCTCACTTCTGCTAT...ATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp GCCACTCATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAACTCTTGACTGTGGCTaGTGCCCAGCAAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: ATHDPAVGLWVHLAGQEQTLDCG*CPARPD
Trigger: ATCTGGTCTTGCTGGGCAGCAGCCACAGTCAAGAGT...TTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp TCCCCCTGCTTCCCATTTCTTGCTACAGGGCCCTGCGGTATCATCTTTGATTCTGGGCCCAGGTGTGTCTaGAGCATTTCCTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: SPCFPFLATGPCGIIFDSGPRCV*SISSQT
Trigger: AGTCTGGGAGGAAATGCTGCAGACACACCTGGGCCC...AGAATCAAAGATGATACCGCAGGGCCCTGTAGCAAGAAATGGGAAGCAGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAACCCAGCGCCCGCAGCTaGTCCCCCGCTGGATGCGGA +
Preference number: 4 (lower is better)
Translates to: VHKTRTKRETAEISLKRKPSARS*SPAGCG
Trigger: TCCGCATCCAGCGGGGGAGCAGCTGCGGGCGCTGGG...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCAGTCACTCTGCTCATGTaGAGTCTGCTATTAGACCCA +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPVTLLM*SLLLDP
Trigger: TGGGTCTAATAGCAGACTGCACATGAGCAGAGTGAC...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp GGCCCAGGGCTGCCTAACACGGACCCACAAGCCTCCACATGTAAAATGTTGTTTTCGCATACCTGTGGCTaGTGCCCAGCAAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: GPGLPNTDPQASTCKMLFSHTCG*CPARPD
Trigger: ATCTGGTCTTGCTGGGCAGCAGCCACAGGTATGCGA...AAACAACATTTTACATGTGGAGGCTTGTGGGTCCGTGTTAGGCAGCCCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp CTACAGGGCCCTGCGGTATCATCTTTGATTCTAGCTGTTAGGGCCCTAATTTCCCCTTTGAGGGTGCTGTaGCCTTCCCTCGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LQGPAVSSLILAVRALISPLRVL*PSLVSG
Trigger: CCCAGACACGAGGGAAGGCCACAGCACCCTCAAAGG...GGAAATTAGGGCCCTAACAGCTAGAATCAAAGATGATACCGCAGGGCCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp AGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATCGTTCTGTCCATGCATTCAGCCAGTCCCCTGGCCTaGATGCATAATGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RYRTGRASREQIVLSMHSASPLA*MHNGAA
Trigger: AGCAGCCCCATTATGCATCCAGGCCAGGGGACTGGC...TGAATGCATGGACAGAACGATTTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp GCCACTCATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAAGGACTCCGTTGCCTTaGCACTCTTTCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ATHDPAVGLWVHLAGQEQRTPLP*HSFFLQ
Trigger: CTGCAGGAAGAAAGAGTGCCAAGGCAACGGAGTCCT...TTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp GTACACTGCCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTGCAGCGTCAGTGGGAGAGCTaGGACCTACATGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: VHCLSGRQCGATVKRALQRQWES*DLHAPA
Trigger: AGCTGGTGCATGTAGGTCCCAGCTCTCCCACTGACG...CTGCAAAGCCCTTTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp GTACACTGCCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTGCAGGCATGGCCCCACAAGTaGTTCTTCATGGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: VHCLSGRQCGATVKRALQAWPHK*FFMAHS
Trigger: GGAGTGGGCCATGAAGAACCACTTGTGGGGCCATGC...CTGCAAAGCCCTTTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp TGCTGTAATGTGGGGCCCACGGGGCATCTCCTTGCACAGACCTGCACAGATAACGACAGGAACAAAGCATaGCCCCACAAGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CCNVGPTGHLLAQTCTDNDRNKA*PHKWFF
Trigger: GAAGAACCACTTGTGGGGCCATGCTTTGTTCCTGTC...GTTATCTGTGCAGGTCTGTGCAAGGAGATGCCCCGTGGGCCCCACATTACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp AGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATCGTTCTGCCAGCTGTAGGTCTGTaGGTCCATCTTGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RGIERYRTGRASREQIVLPAVGL*VHLAGQ
Trigger: CTGTCCAGCAAGATGGACCCACAGACCTACAGCTGG...CAGAACGATTTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCAAGACAGCTGCACCAATaGCTTCGCAGTAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPRQLHQ*LRSNAK
Trigger: CTTTGCATTACTGCGAAGCCATTGGTGCAGCTGTCT...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GCTAGTGGCCGTGGGCAGCTGAGGCACCTGAGATGGGTTGTAAAGAGGAACAGCGAAGAACACCAGGGTTaGAGCAGAGCTCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: ASGRGQLRHLRWVVKRNSEEHQG*SRAQRK
Trigger: TTTCCTTTGAGCTCTGCTCCAACCCTGGTGTTCTTC...GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp CTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATCTGGCTGGACTCACTAGCCAATaGTGGCTTATTTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLLPFAPAASEVALANLAGLTSQ*WLIFLG
Trigger: GCCCAGAAAAATAAGCCATCATTGGCTAGTGAGTCC...AGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp CGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGAGCTTATACACCTGGAAAGCATAGCTGCTGGAGCTaGGACCAGACTCACGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGHNLPDGKHKGAYTPGKHSCWS*DQTHAA
Trigger: AGCAGCGTGAGTCTGGTCTCAGCTCCAGCAGCTATG...CTTTCCAGGTGTATAAGCTCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp AGGCTCTCAAGCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCTCAGATTTGCAGCTCTaGGCTGCTTTCTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RLSSHHHKCHHHVTLLMCSDLQL*AAFCWQ
Trigger: TTGCCAGCAGAAAGCAGCTCAGAGCTGCAAATCTGA...GCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGTCTGCTATGGCTCCCGAAATATCTaGGCGAGTAGGATGAGGATC +
Preference number: 4 (lower is better)
Translates to: ATTISATTMSLCSCAVCYGSRNI*ASRMRI
Trigger: GATCCTCATCCTACTCGCTCAGATATTTCGGGAGCC...ATAGCAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp AGGGCCCTAATTTCCCCAAGGCTCTCAAGCCACCACCATAAGTGCCACCACCATATGGGTCTCAGGAACTaGGTAAAAAGGCCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: RALISPRLSSHHHKCHHHMGLRN*VKRPRC
Trigger: ACACCGAGGCCTTTTTACTCAGTTCCTGAGACCCAT...ATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCTTGGGGAAATTAGGGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp TGCTGCCAGTCCCTGGTAGATGGGTCTCAGGAACTGAGTAAAAAGGCCTCGGTGATGGGTCTCAGGAACTaGGTAAAAAGGCCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: CCQSLVDGSQELSKKASVMGLRN*VKRPRC
Trigger: ACACCGAGGCCTTTTTACTCAGTTCCTGAGACCCAT...CACCGAGGCCTTTTTACTCAGTTCCTGAGACCCATCTACCAGGGACTGGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp GTACACTGCCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTGCAGAAGGGCTTTGCAGGCTaGCTGCCTGGATTCCGAATC +
Preference number: 4 (lower is better)
Translates to: VHCLSGRQCGATVKRALQKGFAG*LPGFRI
Trigger: GATTCGGAATCCAGGCAGTCAGCCTGCAAAGCCCTT...CTGCAAAGCCCTTTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp TTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGAGACCAGACTCACGCTaGTGGAGAAGGTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: LCCVLRDPVLLPSKCPVERPDSR*WRRLDS
Trigger: TGAGTCCAACCTTCTCCAGCAGCGTGAGTCTGGTCT...CTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACAGGAGAACCAAGAGCTaGCACAGTAGAGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LQADCLDSESNSPTPSLYRRTKS*HSRAES
Trigger: AGACTCAGCTCTACTGTGGCAGCTCTTGGTTCTCCT...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp CTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATCTGGCTAGCTTCTTGCAGTCTTaGATTAGCAGCTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: LLLPFAPAASEVALANLASFLQS*ISSSAM
Trigger: CATCGCTGAGCTGCTAATGCAAGACTGCAAGAAGCT...AGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACAATTTCTCCACGATCTaGGCAGGTGTCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: LQADCLDSESNSPTPSLYNFSTI*AGVSTL
Trigger: CAGTGTGGAGACACCTGCGCAGATCGTGGAGAAATT...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp TGCTGCCAGTCCCTGGTAGATGGGTCTCAGGAACTGAGTAAAAAGGCCTCGGTGAATTTCTCCACGATCTaGGCAGGTGTCTCCACACTG +
Preference number: 4 (lower is better)
Translates to: CCQSLVDGSQELSKKASVNFSTI*AGVSTL
Trigger: CAGTGTGGAGACACCTGCGCAGATCGTGGAGAAATT...CACCGAGGCCTTTTTACTCAGTTCCTGAGACCCATCTACCAGGGACTGGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp GCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGTCTGCTATCTCCAGTCTCCCCACTaGTTTTCTCCACAACACGTG +
Preference number: 4 (lower is better)
Translates to: ATTISATTMSLCSCAVCYLQSPH*FSPQHV
Trigger: CACGTGTTGTGGAGAAAAGCAGTGGGGAGACTGGAG...ATAGCAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp GGCTTCGATCGAAACCAGCTGAACCAGCCAAACCCTGAGCTCTTTGTATGCTCCATAGCACAGGGTGACTaGTCTCTCCCTGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GFDRNQLNQPNPELFVCSIAQGD*SLPGSR
Trigger: TCTTGAGCCAGGGAGAGAGCAGTCACCCTGTGCTAT...GGAGCATACAAAGAGCTCAGGGTTTGGCTGGTTCAGCTGGTTTCGATCGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp TGCTGCCAGTCCCTGGTAGATGGGTCTCAGGAACTGAGTAAAAAGGCCTCGGTGATCCCCAATGTCTCCTaGTACCTTTTGCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CCQSLVDGSQELSKKASVIPNVS*YLLLQL
Trigger: CAGCTGGAGCAAAAGGTAGCAGGAGACATTGGGGAT...CACCGAGGCCTTTTTACTCAGTTCCTGAGACCCATCTACCAGGGACTGGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp GAGACTGAATTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCTCACTGCCACGCTGCTaGCAGTCCCTGGTAGATGGG +
Preference number: 4 (lower is better)
Translates to: ETELCCVLRDPVLLPSKCSLPRC*QSLVDG
Trigger: CCCATCTACCAGGGACTGGCAGCAGCGTGGCAGTGA...GCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAATTCAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp GCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGTCTGCTATCCTGAGCTCTTTGTATaGTCCTTCCCATCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: ATTISATTMSLCSCAVCYPELFV*SFPSPS
Trigger: GCTCGGAGATGGGAAGGAGCATACAAAGAGCTCAGG...ATAGCAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp TCCCCCTGCTTCCCATTTCTTGCTACAGGGCCCTGCGGTATCATCTTTGATTCTGAGATCCTGTCCTCTTaGCTTCTAAGTGCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SPCFPFLATGPCGIIFDSEILSS*LLSARW
Trigger: CCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC...AGAATCAAAGATGATACCGCAGGGCCCTGTAGCAAGAAATGGGAAGCAGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp TTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGAGCCACCACCATAAGTaGCACCACCATGTCACTCTG +
Preference number: 4 (lower is better)
Translates to: LCCVLRDPVLLPSKCPVESHHHK*HHHVTL
Trigger: CAGAGTGACATGGTGGTGGCACTTATGGTGGTGGCT...CTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTATGAGCTGGGTACACTaGCTCAGTGGTAGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLTRMGRGIERYRTGRASMSWVH*LSGRQC
Trigger: ACACTGCCTACCACTGAGGCAGTGTACCCAGCTCAT...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp CATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAAGCATGCCCATCATGACAGCCTaGTGTTACTCACAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HDPAVGLWVHLAGQEQSMPIMTA*CYSQLA
Trigger: TGCCAGCTGTGAGTAACAGCAGGCTGTCATGATGGG...CATGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGGACTCCGTTGCCTTaGCACTCTTTCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLTRMGRGIERYRTGRASRTPLP*HSFFLQ
Trigger: CTGCAGGAAGAAAGAGTGCCAAGGCAACGGAGTCCT...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp GCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGTCTGCTATCCAGACTCACGCTGCTaGAGAAGGTTGGACTCACTA +
Preference number: 4 (lower is better)
Translates to: ATTISATTMSLCSCAVCYPDSRC*RRLDSL
Trigger: TAGTGAGTCCAACCTTCTCCAGCAGCGTGAGTCTGG...ATAGCAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTCCAGACTCACGCTGCTaGAGAAGGTTGGACTCACTA +
Preference number: 4 (lower is better)
Translates to: LLTRMGRGIERYRTGRASPDSRC*RRLDSL
Trigger: TAGTGAGTCCAACCTTCTCCAGCAGCGTGAGTCTGG...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTGGATGTAGAACTTCATaGGTGCTTTGGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGGCRTS*VLWDQL
Trigger: CAGCTGGTCCCAAAGCACCCATGAAGTTCTACATCC...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTACAAGTGGTTCTTCATaGCCCACTCCAAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGTSGSS*PTPRLP
Trigger: AGGAAGCCTTGGAGTGGGCCATGAAGAACCACTTGT...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCAAAGATTTCCGTCCTCTaGATTGCCTCAGTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPKISVL*IASVVA
Trigger: TGCAACAACTGAGGCAATCCAGAGGACGGAAATCTT...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCACTCAGAAATACTTCGTaGTCTAGCAGCCAATGGTGT +
Preference number: 4 (lower is better)
Translates to: LLSARWRHRASTNLLRVPLRNTS*SSSQWC
Trigger: ACACCATTGGCTGCTAGACCACGAAGTATTTCTGAG...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp TGCTGCCAGTCCCTGGTAGATGGGTCTCAGGAACTGAGTAAAAAGGCCTCGGTGCTGAGGCACCTGAGATaGGTTGTAAAGAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: CCQSLVDGSQELSKKASVLRHLR*VVKRNS
Trigger: GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAG...CACCGAGGCCTTTTTACTCAGTTCCTGAGACCCATCTACCAGGGACTGGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp AGGGCCCTAATTTCCCCAAGGCTCTCAAGCCACCACCATAAGTGCCACCACCATTGTTTATTCTCAGCATaGCTGGGTGGGATAGCGACG +
Preference number: 4 (lower is better)
Translates to: RALISPRLSSHHHKCHHHCLFSA*LGGIAT
Trigger: CGTCGCTATCCCACCCAGCCATGCTGAGAATAAACA...ATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCTTGGGGAAATTAGGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp AGGCTCTCAAGCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGAAAGTTTCAGTCCTaGGAGATGAGCCTGGGACGT +
Preference number: 4 (lower is better)
Translates to: RLSSHHHKCHHHVTLLMCRKFQS*EMSLGR
Trigger: ACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCT...GCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CTACAGGGCCCTGCGGTATCATCTTTGATTCTAGCTGTTAGGGCCCTAATTTCCCTTCTAAGTGCCCGGTaGAGGCATCGGGCTAGCACA +
Preference number: 4 (lower is better)
Translates to: LQGPAVSSLILAVRALISLLSAR*RHRAST
Trigger: TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG...GGAAATTAGGGCCCTAACAGCTAGAATCAAAGATGATACCGCAGGGCCCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GCATCAGCCCACCTCTTTGCAGAGGAGGACCTGTGGCCTGAGGCCCCCGCCAATGCTAAAACAGTCCCTTaGAAAATGTCCTTACTGTTT +
Preference number: 4 (lower is better)
Translates to: ASAHLFAEEDLWPEAPANAKTVP*KMSLLF
Trigger: AAACAGTAAGGACATTTTCCAAGGGACTGTTTTAGC...ATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTTTGTCTTGCCATTGGTaGAACCTCTCTCCATTGTGC +
Preference number: 4 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGLSCHW*NLSPLC
Trigger: GCACAATGGAGAGAGGTTTCACCAATGGCAAGACAA...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp TTTTCTCCACAACACGTGGCTGCCTGTGGAATCCTCCCCGACATGAGCTGGAAGTTGTCTTGCCATTGGTaGAACCTCTCTCCATTGTGC +
Preference number: 4 (lower is better)
Translates to: FSPQHVAACGILPDMSWKLSCHW*NLSPLC
Trigger: GCACAATGGAGAGAGGTTTCACCAATGGCAAGACAA...CTTCCAGCTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp CTACAGGGCCCTGCGGTATCATCTTTGATTCTAGCTGTTAGGGCCCTAATTTCCGAGGAGACATCAGCCTaGACTGGACTCCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LQGPAVSSLILAVRALISEETSA*TGLQAA
Trigger: AGCAGCTTGGAGTCCAGTTCAGGCTGATGTCTCCTC...GGAAATTAGGGCCCTAACAGCTAGAATCAAAGATGATACCGCAGGGCCCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp CGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGAGCTTATACACCTGGAAAGTGCTTTGGGACCAGCTaGGGAGACATCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: RGHNLPDGKHKGAYTPGKCFGTS*GDISLN
Trigger: GTTCAGGCTGATGTCTCCTCAGCTGGTCCCAAAGCA...CTTTCCAGGTGTATAAGCTCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp TTAGTGACTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGAATCCTCCCCGACATaGGCTGGAAGAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LVTLNTYGEGDREIQNREESSPT*AGRGSA
Trigger: TGCAGACCCTCTTCCAGCTCATGTCGGGGAGGATTC...CTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAGTCACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp CCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAGCTTCAGTTTCTCCTGGAAAGAAGGGATaGAGGATTTGGGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: PCLHCVFLKPEDLTASVSPGKKG*RIWGGP
Trigger: TGGGCCGCCCCAAATCCTTCATCCCTTCTTTCCAGG...AGAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp CTACAGGGCCCTGCGGTATCATCTTTGATTCTAGCTGTTAGGGCCCTAATTTCCCTCATCCTCCTTGGCTaGACTGGCGGAACTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LQGPAVSSLILAVRALISLILLG*TGGTLR
Trigger: TCTGAGAGTTCCGCCAGTTCAGCCAAGGAGGATGAG...GGAAATTAGGGCCCTAACAGCTAGAATCAAAGATGATACCGCAGGGCCCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp AGGGCCCTAATTTCCCCAAGGCTCTCAAGCCACCACCATAAGTGCCACCACCATCTAGCACAAACCTCTTaGGGGTCCCAATATGGTAGA +
Preference number: 4 (lower is better)
Translates to: RALISPRLSSHHHKCHHHLAQTS*GSQYGR
Trigger: TCTACCATATTGGGACCCTCAAGAGGTTTGTGCTAG...ATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCTTGGGGAAATTAGGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GGCCCAGGGCTGCCTAACACGGACCCACAAGCCTCCACATGTAAAATGTTGTTTGGAGCCGGCGGTAGCTaGAATTCACATGAGAAAATG +
Preference number: 4 (lower is better)
Translates to: GPGLPNTDPQASTCKMLFGAGGS*NSHEKM
Trigger: CATTTTCTCATGTGAATTTCAGCTACCGCCGGCTCC...AAACAACATTTTACATGTGGAGGCTTGTGGGTCCGTGTTAGGCAGCCCTGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp GAGACTGAATTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCTCAACAAGGGCTGCTTaGCCGTCAGTGGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ETELCCVLRDPVLLPSKCSTRAA*PSVGEL
Trigger: CAGCTCTCCCACTGACGGGCAAGCAGCCCTTGTTGA...GCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAATTCAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp AGGGCCCTAATTTCCCCAAGGCTCTCAAGCCACCACCATAAGTGCCACCACCATATAACCTCCATGCTGTaGAGTTCAACAAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RALISPRLSSHHHKCHHHITSML*SSTRAA
Trigger: AGCAGCCCTTGTTGAACTGCACAGCATGGAGGTTAT...ATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCTTGGGGAAATTAGGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp AGGCTCTCAAGCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCTTTGCAGCTCTGAGCTaGTTTCTGCTGGCAAAACGT +
Preference number: 4 (lower is better)
Translates to: RLSSHHHKCHHHVTLLMCFAALS*FLLAKR
Trigger: ACGTTTTGCCAGCAGAAAGCAGCTCAGAGCTGCAAA...GCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACTTTGCAGCTCTGAGCTaGTTTCTGCTGGCAAAACGT +
Preference number: 4 (lower is better)
Translates to: LQADCLDSESNSPTPSLYFAALS*FLLAKR
Trigger: ACGTTTTGCCAGCAGAAAGCAGCTCAGAGCTGCAAA...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACCCAGTGTCTCAGATTTaGAGCTCTGAGCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LQADCLDSESNSPTPSLYPVSQI*SSELLS
Trigger: AGAAAGCAGCTCAGAGCTGCAAATCTGAGACACTGG...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp CTGGCTCCAGGTCCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAAGGAGAACCAAGAGCTaGCACAGTAGAGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LAPGPCLHCVFLKPEDLTRRTKS*HSRAES
Trigger: AGACTCAGCTCTACTGTGGCAGCTCTTGGTTCTCCT...TGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp GAGACTGAATTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCTCCACAACACGTGGCTaGCTGTGGAATCCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: ETELCCVLRDPVLLPSKCSTTRG*LWNPPR
Trigger: TCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGA...GCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAATTCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp TTAGTGACTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGTCCACAACACGTGGCTaGCTGTGGAATCCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: LVTLNTYGEGDREIQNRESTTRG*LWNPPR
Trigger: TCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGA...CTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAGTCACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp CTACAGGGCCCTGCGGTATCATCTTTGATTCTAGCTGTTAGGGCCCTAATTTCCATAGCAGAAGTGAGCTaGCTCCACAAGCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LQGPAVSSLILAVRALISIAEVS*LHKPLP
Trigger: GGGAAGGGGCTTGTGGAGGCAGCTCACTTCTGCTAT...GGAAATTAGGGCCCTAACAGCTAGAATCAAAGATGATACCGCAGGGCCCTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CTGGCTCCAGGTCCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAGGTCCCTGTCTCCACTaGGTCTTTCTAAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: LAPGPCLHCVFLKPEDLTGPCLH*VFLKPE
Trigger: CTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACC...TGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp TGCTGTAATGTGGGGCCCACGGGGCATCTCCTTGCACAGACCTGCACAGATAACATTCCTCCCTCATTGTaGGAGACTGATAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: CCNVGPTGHLLAQTCTDNIPPSL*ETDSSD
Trigger: ATCAGAGCTATCAGTCTCCCACAATGAGGGAGGAAT...GTTATCTGTGCAGGTCTGTGCAAGGAGATGCCCCGTGGGCCCCACATTACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp ATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACTTCCTGCAGCCACTGTaGGTGTCCATGATAGTAATA +
Preference number: 4 (lower is better)
Translates to: ILSSCLLSARWRHRASTNFLQPL*VSMIVI
Trigger: TATTACTATCATGGACACCCACAGTGGCTGCAGGAA...GTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GCTTTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTTCCTGCAGCCACTGTaGGTGTCCATGATAGTAATA +
Preference number: 4 (lower is better)
Translates to: ALQADCLDSESNSPTPSLFLQPL*VSMIVI
Trigger: TATTACTATCATGGACACCCACAGTGGCTGCAGGAA...CAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp CTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATCTGGCTTTCCTGCAGCCACTGTaGGTGTCCATGATAGTAATA +
Preference number: 4 (lower is better)
Translates to: LLLPFAPAASEVALANLAFLQPL*VSMIVI
Trigger: TATTACTATCATGGACACCCACAGTGGCTGCAGGAA...AGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp TTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGGATGTAGAACTTCATaGGTGCTTTGGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LCCVLRDPVLLPSKCPVEGCRTS*VLWDQL
Trigger: CAGCTGGTCCCAAAGCACCCATGAAGTTCTACATCC...CTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CAATGTCTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATACCATGGACCCATTCTaGCGACAAAGGAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: QCLLLPFAPAASEVALANTMDPF*RQRRTK
Trigger: CTTGGTTCTCCTTTGTCGCCAGAATGGGTCCATGGT...ATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CTGGCTCCAGGTCCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAACAAGTGGTTCTTCATaGCCCACTCCAAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LAPGPCLHCVFLKPEDLTTSGSS*PTPRLP
Trigger: AGGAAGCCTTGGAGTGGGCCATGAAGAACCACTTGT...TGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp AATGCAAAGCCTGGGACACGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGATTTCTCCACAACACGTaGCTGCCTGTGGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: NAKPGTRGHNLPDGKHKGFLHNT*LPVESS
Trigger: GGAGGATTCCACAGGCAGCCACGTGTTGTGGAGAAA...TCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp AGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATCGTTCTGTCCATGCATTCACCAGGGTGTCCCCAATaGCAACAATCGCACGCTGAT +
Preference number: 4 (lower is better)
Translates to: RYRTGRASREQIVLSMHSPGCPQ*QQSHAD
Trigger: ATCAGCGTGCGATTGTTGCCATTGGGGACACCCTGG...TGAATGCATGGACAGAACGATTTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp GCCAATGGTGTCTGTGGTTTGGAAATGACCTCTTGGCCATCAGGAGGCTGGGAACCTCCTTGGCTGAACTaGCGGAACTCTCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: ANGVCGLEMTSWPSGGWEPPWLN*RNSQKY
Trigger: GTATTTCTGAGAGTTCCGCCAGTTCAGCCAAGGAGG...TTCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAAACCACAGACACCATTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAGCTTCAGTTTCTAACATCCGGCAGAGGTaGGGACTCAGGGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: PCLHCVFLKPEDLTASVSNIRQR*GLRGRC
Trigger: ACACCTTCCCCTGAGTCCCCACCTCTGCCGGATGTT...AGAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp TTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGCTGAGGCACCTGAGATaGGTTGTAAAGAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: LCCVLRDPVLLPSKCPVELRHLR*VVKRNS
Trigger: GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAG...CTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTTTTTCCAGTTTTGCCTaGGTAGGCTCTCAGAACAGG +
Preference number: 4 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGFSSFA*VGSQNR
Trigger: CCTGTTCTGAGAGCCTACCCAGGCAAAACTGGAAAA...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTGGACTCACTAGCCAATaGTGGCTTATTTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLTRMGRGIERYRTGRASGLTSQ*WLIFLG
Trigger: GCCCAGAAAAATAAGCCATCATTGGCTAGTGAGTCC...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp CCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAGCTTCAGTTTCTAGGGCACGTGAGCCATaGGATAGCAGAAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PCLHCVFLKPEDLTASVSRAREP*DSRSEL
Trigger: CAGCTCACTTCTGCTATCTCATGGCTCACGTGCCCT...AGAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp CAATGTCTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATAATTTCAAAAACTCTTaGCTGTGGCTGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QCLLLPFAPAASEVALANNFKNS*LWLLPS
Trigger: GCTGGGCAGCAGCCACAGTCAAGAGTTTTTGAAATT...ATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGACATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp TTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGAATTGTGCTGTGTCTTaGGAGATCCTGTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LCCVLRDPVLLPSKCPVENCAVS*EILSSC
Trigger: GCAAGAGGACAGGATCTCTCAAGACACAGCACAATT...CTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAGTTACCATGACAATATaGTGCCTACAGCAATCTAAC +
Preference number: 4 (lower is better)
Translates to: EILSSCLLSARWRHRASTVTMTI*CLQQSN
Trigger: GTTAGATTGCTGTAGGCATCATATTGTCATGGTAAC...TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACACAGAAGGGATTCTTTaGCAAGCTAGCCATGTGCTA +
Preference number: 4 (lower is better)
Translates to: LQADCLDSESNSPTPSLYTEGIL*QASHVL
Trigger: TAGCACATGGCTAGCTTGTCAAAGAATCCCTTCTGT...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGCTTCTTGCAGTCTTaGATTAGCAGCTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: LLTRMGRGIERYRTGRASSFLQS*ISSSAM
Trigger: CATCGCTGAGCTGCTAATGCAAGACTGCAAGAAGCT...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTAGCTGGAAGAGGGTCTaGAGTGGGTCATTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: KRARKFQSWEMSLGRVFISWKRV*SGSLSA
Trigger: GGCGCTCAATGACCCACTGCAGACCCTCTTCCAGCT...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp AGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATCGTTCTGTCCATGCATTCACTCCAGTCTCCCCACTaGTTTTCTCCACAACACGTG +
Preference number: 4 (lower is better)
Translates to: RYRTGRASREQIVLSMHSLQSPH*FSPQHV
Trigger: CACGTGTTGTGGAGAAAAGCAGTGGGGAGACTGGAG...TGAATGCATGGACAGAACGATTTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTAGCTGCCTCCGAAGTTaGGCTAGCCAATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KRARKFQSWEMSLGRVFISCLRS*ASQSGS
Trigger: GGAGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCT...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTACCCTGCACCCCCTCCTaGTGGGTAGGAGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLPCTPS*WVGARL
Trigger: CAGCCGGGCTCCTACCCAGCAGGAGGGGGTGCAGGG...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp GTACACTGCCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTGCAGGACAAGCTAGCCATGTaGTATCAGAGACCAGGAACC +
Preference number: 4 (lower is better)
Translates to: VHCLSGRQCGATVKRALQDKLAM*YQRPGT
Trigger: GGTTCCTGGTCTCTGATAGCACATGGCTAGCTTGTC...CTGCAAAGCCCTTTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp ATACAGCTCTGGGTCCCCAGCCTGATTCGACAGAATCACAGCCAAGTGAGGCCTATTCCTCCCTCATTGTaGGAGACTGATAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: IQLWVPSLIRQNHSQVRPIPPSL*ETDSSD
Trigger: ATCAGAGCTATCAGTCTCCCACAATGAGGGAGGAAT...AGGCCTCACTTGGCTGTGATTCTGTCGAATCAGGCTGGGGACCCAGAGCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp GCTAGTGGCCGTGGGCAGCTGAGGCACCTGAGATGGGTTGTAAAGAGGAACAGCCTGTTAGATTGGAAGTaGGTCTCACTATTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ASGRGQLRHLRWVVKRNSLLDWK*VSLFVP
Trigger: TGGAACAAATAGTGAGACCCACTTCCAATCTAACAG...GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp TCCCCCTGCTTCCCATTTCTTGCTACAGGGCCCTGCGGTATCATCTTTGATTCTACAAGTGGTTCTTCATaGCCCACTCCAAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPCFPFLATGPCGIIFDSTSGSS*PTPRLP
Trigger: AGGAAGCCTTGGAGTGGGCCATGAAGAACCACTTGT...AGAATCAAAGATGATACCGCAGGGCCCTGTAGCAAGAAATGGGAAGCAGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp AGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATCGTTCTGTCCATGCATTCAGTGGGTCCATCTTGCTaGACAGGAACAAAGCATGGC +
Preference number: 4 (lower is better)
Translates to: RYRTGRASREQIVLSMHSVGPSC*TGTKHG
Trigger: GCCATGCTTTGTTCCTGTCCAGCAAGATGGACCCAC...TGAATGCATGGACAGAACGATTTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp GGCTTCGATCGAAACCAGCTGAACCAGCCAAACCCTGAGCTCTTTGTATGCTCCAGACAGCTGCACCAATaGCTTCGCAGTAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: GFDRNQLNQPNPELFVCSRQLHQ*LRSNAK
Trigger: CTTTGCATTACTGCGAAGCCATTGGTGCAGCTGTCT...GGAGCATACAAAGAGCTCAGGGTTTGGCTGGTTCAGCTGGTTTCGATCGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTAGACTGTTCCTCCAGTaGCCTCTGTCACTGCCACGC +
Preference number: 4 (lower is better)
Translates to: KRARKFQSWEMSLGRVFIRLFLQ*PLSLPR
Trigger: GCGTGGCAGTGACAGAGGCCACTGGAGGAACAGTCT...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp ATACAGCTCTGGGTCCCCAGCCTGATTCGACAGAATCACAGCCAAGTGAGGCCTCTCAGAAATACTTCGTaGTCTAGCAGCCAATGGTGT +
Preference number: 4 (lower is better)
Translates to: IQLWVPSLIRQNHSQVRPLRNTS*SSSQWC
Trigger: ACACCATTGGCTGCTAGACCACGAAGTATTTCTGAG...AGGCCTCACTTGGCTGTGATTCTGTCGAATCAGGCTGGGGACCCAGAGCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp TCCCCCTGCTTCCCATTTCTTGCTACAGGGCCCTGCGGTATCATCTTTGATTCTCCTCCTTGGCTGAACTaGCGGAACTCTCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: SPCFPFLATGPCGIIFDSPPWLN*RNSQKY
Trigger: GTATTTCTGAGAGTTCCGCCAGTTCAGCCAAGGAGG...AGAATCAAAGATGATACCGCAGGGCCCTGTAGCAAGAAATGGGAAGCAGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp TGCTGTAATGTGGGGCCCACGGGGCATCTCCTTGCACAGACCTGCACAGATAACAAAAGCCTAATGCTATaGCCAACAGAGAATGTCACC +
Preference number: 4 (lower is better)
Translates to: CCNVGPTGHLLAQTCTDNKSLML*PTENVT
Trigger: GGTGACATTCTCTGTTGGCCATAGCATTAGGCTTTT...GTTATCTGTGCAGGTCTGTGCAAGGAGATGCCCCGTGGGCCCCACATTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR CAA 72 bp CCTGAGCTCTTTGTATGCTCCTTCCCATCTCCGAGCTaGCCTCTCTGGGCAGTATTTCGGGGAGAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: PELFVCSFPSPS*PLWAVFRGEFL
Trigger: TAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGATGGGAAGGAGCATACAAAGAGCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTAGGGCACGTGAGCCATaGGATAGCAGAAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: KRARKFQSWEMSLGRVFIRAREP*DSRSEL
Trigger: CAGCTCACTTCTGCTATCTCATGGCTCACGTGCCCT...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTTCGATCGAAACCAGCTaGACCAGCCAAACCCTGAGC +
Preference number: 4 (lower is better)
Translates to: KRARKFQSWEMSLGRVFISIETS*TSQTLS
Trigger: GCTCAGGGTTTGGCTGGTTCAGCTGGTTTCGATCGA...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAGCTTCAGTTTCTAGACCAGACTCACGCTaGTGGAGAAGGTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: PCLHCVFLKPEDLTASVSRPDSR*WRRLDS
Trigger: TGAGTCCAACCTTCTCCAGCAGCGTGAGTCTGGTCT...AGAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp GTACACTGCCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTGCAGATAACCTCCATGCTGTaGAGTTCAACAAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VHCLSGRQCGATVKRALQITSML*SSTRAA
Trigger: AGCAGCCCTTGTTGAACTGCACAGCATGGAGGTTAT...CTGCAAAGCCCTTTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp CCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAGCTTCAGTTTCTCTCCAGTCTCCCCACTaGTTTTCTCCACAACACGTG +
Preference number: 4 (lower is better)
Translates to: PCLHCVFLKPEDLTASVSLQSPH*FSPQHV
Trigger: CACGTGTTGTGGAGAAAAGCAGTGGGGAGACTGGAG...AGAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp AGGGCCCTAATTTCCCCAAGGCTCTCAAGCCACCACCATAAGTGCCACCACCATTTCCGTCCTCTGGATTaGCTCAGTTGTTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: RALISPRLSSHHHKCHHHFRPLD*LSCCKF
Trigger: AAATTTGCAACAACTGAGGCAATCCAGAGGACGGAA...ATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCTTGGGGAAATTAGGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTTCCATTTTCCAGTTTTaGCTGGGTAGGCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LLTRMGRGIERYRTGRASSIFQF*LGRLSE
Trigger: TTCTGAGAGCCTACCCAGGCAAAACTGGAAAATGGA...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTTATTTCATCTCCCTGTaGCTTGGTTTTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTRMGRGIERYRTGRASYFISL*LGFPPP
Trigger: TGGAGGAGGAAAACCAAGGCACAGGGAGATGAAATA...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp TTAGTGACTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGCTTTGCAGGCTGACTaGCTGGATTCCGAATCCAAC +
Preference number: 4 (lower is better)
Translates to: LVTLNTYGEGDREIQNREALQAD*LDSESN
Trigger: GTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGC...CTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAGTCACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp GTACACTGCCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTGCAGCAGTTAAAAGGGCTTTaGAGGCTGACTGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: VHCLSGRQCGATVKRALQQLKGL*RLTAWI
Trigger: AATCCAGGCAGTCAGCCTGCAAAGCCCTTTTAACTG...CTGCAAAGCCCTTTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp CGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGAGCTTATACACCTGGAAAGGGATGTAGAACTTCATaGGTGCTTTGGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGHNLPDGKHKGAYTPGKGCRTS*VLWDQL
Trigger: CAGCTGGTCCCAAAGCACCCATGAAGTTCTACATCC...CTTTCCAGGTGTATAAGCTCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp TTAGTGACTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGTTTCTCCACAACACGTaGCTGCCTGTGGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: LVTLNTYGEGDREIQNREFLHNT*LPVESS
Trigger: GGAGGATTCCACAGGCAGCCACGTGTTGTGGAGAAA...CTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAGTCACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTCCAGGGTGTCCCCAATaGCAACAATCGCACGCTGAT +
Preference number: 4 (lower is better)
Translates to: KRARKFQSWEMSLGRVFIPGCPQ*QQSHAD
Trigger: ATCAGCGTGCGATTGTTGCCATTGGGGACACCCTGG...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp ATACAGCTCTGGGTCCCCAGCCTGATTCGACAGAATCACAGCCAAGTGAGGCCTAGGAGCTTATACACCTaGAAAGAAGGGATGAAGGAT +
Preference number: 4 (lower is better)
Translates to: IQLWVPSLIRQNHSQVRPRSLYT*KEGMKD
Trigger: ATCCTTCATCCCTTCTTTCCAGGTGTATAAGCTCCT...AGGCCTCACTTGGCTGTGATTCTGTCGAATCAGGCTGGGGACCCAGAGCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp GTACACTGCCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTGCAGCATCTCCCTGTGCCTTaGTTTTCCTCCTCCATAAGT +
Preference number: 4 (lower is better)
Translates to: VHCLSGRQCGATVKRALQHLPVP*FSSSIS
Trigger: ACTTATGGAGGAGGAAAACCAAGGCACAGGGAGATG...CTGCAAAGCCCTTTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
3UTR CAA 72 bp TCCCATTTCTTGCTACAGGGCCCTGCGGTATCATCTTaGATTCTAGCTGTTAGGGCCCTAATTTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SHFLLQGPAVSS*ILAVRALISPR
Trigger: CCTTGGGGAAATTAGGGCCCTAACAGCTAGAATCAAAGATGATACCGCAGGGCCCTGTAGCAAGAAATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp AGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATCGTTCTGCTCATAACCTGGCCTTaGATACAACTGATTGCGATA +
Preference number: 4 (lower is better)
Translates to: RGIERYRTGRASREQIVLLITWP*IQLIAI
Trigger: TATCGCAATCAGTTGTATTCAAGGCCAGGTTATGAG...CAGAACGATTTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp GCTAGTGGCCGTGGGCAGCTGAGGCACCTGAGATGGGTTGTAAAGAGGAACAGCTTGAATACAACTGATTaGGATAACCACCTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: ASGRGQLRHLRWVVKRNSLNTTD*DNHLRN
Trigger: ATTACGAAGGTGGTTATCGCAATCAGTTGTATTCAA...GCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp GTACACTGCCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTGCAGCTCCTTGCACAGACCTaGACAGATAACAATCCCAAA +
Preference number: 4 (lower is better)
Translates to: VHCLSGRQCGATVKRALQLLAQT*TDNNPK
Trigger: TTTGGGATTGTTATCTGTGCAGGTCTGTGCAAGGAG...CTGCAAAGCCCTTTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAAGTCTGGGGCAGCCTCTaGGGAGCCCAAAGTTCCATC +
Preference number: 4 (lower is better)
Translates to: VHKTRTKRETAEISLKRKVWGSL*GAQSSI
Trigger: GATGGAACTTTGGGCTCCCCAGAGGCTGCCCCAGAC...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTGCCAGTCCCCTGGCCTaGATGCATAATGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RVALTSRKVLVESVFCCCASPLA*MHNGAA
Trigger: AGCAGCCCCATTATGCATCCAGGCCAGGGGACTGGC...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTCTGTTAGATTGGAAGTaGGTCTCACTATTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGLLDWK*VSLFVP
Trigger: TGGAACAAATAGTGAGACCCACTTCCAATCTAACAG...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp CTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATCTGGCTTTCCTACTGTTAGATTaGAAGTGGGTCTCACTATTT +
Preference number: 4 (lower is better)
Translates to: LLLPFAPAASEVALANLAFLLLD*KWVSLF
Trigger: AAATAGTGAGACCCACTTCCAATCTAACAGTAGGAA...AGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTCCCAGAGCTCAGCACTaGCCAGTCCTCATCGGTCAG +
Preference number: 4 (lower is better)
Translates to: RVALTSRKVLVESVFCCCPRAQH*PVLIGQ
Trigger: CTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGG...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CTTCAGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGGCATGGCCCCACAAGTaGTTCTTCATGGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: LQSSLDIQKSPGRKCFLLAWPHK*FFMAHS
Trigger: GGAGTGGGCCATGAAGAACCACTTGTGGGGCCATGC...CAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAGCTTCAGTTTCTGACAGGAACAAAGCATaGCCCCACAAGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PCLHCVFLKPEDLTASVSDRNKA*PHKWFF
Trigger: GAAGAACCACTTGTGGGGCCATGCTTTGTTCCTGTC...AGAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp GCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGTCTGCTATAGGAGCTTATACACCTaGAAAGAAGGGATGAAGGAT +
Preference number: 4 (lower is better)
Translates to: ATTISATTMSLCSCAVCYRSLYT*KEGMKD
Trigger: ATCCTTCATCCCTTCTTTCCAGGTGTATAAGCTCCT...ATAGCAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp AATGCAAAGCCTGGGACACGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGAAGCCAATGGTGTCTGTaGTTTGGAAATGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: NAKPGTRGHNLPDGKHKGSQWCL*FGNDLL
Trigger: CAAGAGGTCATTTCCAAACCACAGACACCATTGGCT...TCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
3UTR CAA 72 bp TTATCAGCCTCATCAGAGGACTCCTTCTCATCCTCCTaGGCTGAACTGGCGGAACTCTCAGAAATACTTCGT +
Preference number: 4 (lower is better)
Translates to: LSASSEDSFSSS*AELAELSEILR
Trigger: ACGAAGTATTTCTGAGAGTTCCGCCAGTTCAGCCAAGGAGGATGAGAAGGAGTCCTCTGATGAGGCTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp TTTTCTCCACAACACGTGGCTGCCTGTGGAATCCTCCCCGACATGAGCTGGAAGATTTGTCCTGGGTTTTaGGTAAGTTGTGCAGTTATT +
Preference number: 4 (lower is better)
Translates to: FSPQHVAACGILPDMSWKICPGF*VSCAVI
Trigger: AATAACTGCACAACTTACTCAAAACCCAGGACAAAT...CTTCCAGCTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp TTAGTGACTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGCCTAATCAAGGGTCCTaGGAAACTTCTCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: LVTLNTYGEGDREIQNREPNQGS*ETSHLL
Trigger: GAGGAGATGAGAAGTTTCTCAGGACCCTTGATTAGG...CTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAGTCACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp CTTCAGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGCTCATCCTCCTTGGCTaGACTGGCGGAACTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LQSSLDIQKSPGRKCFLLLILLG*TGGTLR
Trigger: TCTGAGAGTTCCGCCAGTTCAGCCAAGGAGGATGAG...CAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp TGCTGTAATGTGGGGCCCACGGGGCATCTCCTTGCACAGACCTGCACAGATAACTTGAATACAACTGATTaGGATAACCACCTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: CCNVGPTGHLLAQTCTDNLNTTD*DNHLRN
Trigger: ATTACGAAGGTGGTTATCGCAATCAGTTGTATTCAA...GTTATCTGTGCAGGTCTGTGCAAGGAGATGCCCCGTGGGCCCCACATTACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp GGCCCAGGGCTGCCTAACACGGACCCACAAGCCTCCACATGTAAAATGTTGTTTCTTCTCATCTCCTCTTaGTCTTCGGAATCATTAAGA +
Preference number: 4 (lower is better)
Translates to: GPGLPNTDPQASTCKMLFLLISS*SSESLR
Trigger: TCTTAATGATTCCGAAGAGCAAGAGGAGATGAGAAG...AAACAACATTTTACATGTGGAGGCTTGTGGGTCCGTGTTAGGCAGCCCTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR GCA 90 bp AATGCAAAGCCTGGGACACGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGATTCCGTCCTCTGGATTaGCTCAGTTGTTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: NAKPGTRGHNLPDGKHKGFRPLD*LSCCKF
Trigger: AAATTTGCAACAACTGAGGCAATCCAGAGGACGGAA...TCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTGGTCCCTGTCTCCACTaGGTCTTTCTAAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: KRARKFQSWEMSLGRVFIGPCLH*VFLKPE
Trigger: CTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACC...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTAAGTGGCCTCTGTCACTaGCACGCTGCTGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLSGLCH*HAAASP
Trigger: GGGACTGGCAGCAGCGTGGCAGTGACAGAGGCCACT...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTCTGGTGGGGAGAAGATaGTCTGGGGGTCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: RVALTSRKVLVESVFCCCLVGRR*SGGLLR
Trigger: TCTGAGGAGACCCCCAGAGCATCTTCTCCCCACCAG...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTTCTCTGAATTTGTCCTaGGTTTTGAGTAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LLTRMGRGIERYRTGRASSLNLS*VLSKLC
Trigger: GCACAACTTACTCAAAACCCAGGACAAATTCAGAGA...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAAACACGTGGCTGCCTGTaGAATCCTCCCCGACATGAG +
Preference number: 4 (lower is better)
Translates to: VHKTRTKRETAEISLKRKTRGCL*NPPRHE
Trigger: CTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGT...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTAGACTGTTCCTCCAGTaGCCTCTGTCACTGCCACGC +
Preference number: 4 (lower is better)
Translates to: RVALTSRKVLVESVFCCCRLFLQ*PLSLPR
Trigger: GCGTGGCAGTGACAGAGGCCACTGGAGGAACAGTCT...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CTACAGGGCCCTGCGGTATCATCTTTGATTCTAGCTGTTAGGGCCCTAATTTCCTGGTCTAGCAGCCAATaGTGTCTGTGGTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LQGPAVSSLILAVRALISWSSSQ*CLWFGN
Trigger: ATTTCCAAACCACAGACACCATTGGCTGCTAGACCA...GGAAATTAGGGCCCTAACAGCTAGAATCAAAGATGATACCGCAGGGCCCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAACGGGGGATGCGTTCTTaGTGGGCTTCGATCGAAACC +
Preference number: 4 (lower is better)
Translates to: VHKTRTKRETAEISLKRKRGMRS*WASIET
Trigger: GGTTTCGATCGAAGCCCACCAAGAACGCATCCCCCG...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp TTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGATTTGTCCTGGGTTTTaGGTAAGTTGTGCAGTTATT +
Preference number: 4 (lower is better)
Translates to: LCCVLRDPVLLPSKCPVEICPGF*VSCAVI
Trigger: AATAACTGCACAACTTACTCAAAACCCAGGACAAAT...CTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp TTAGTGACTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGCCAAAGTTCCATCCTTaGCTCTCTGAATTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LVTLNTYGEGDREIQNREPKFHP*LSEFVL
Trigger: CAGGACAAATTCAGAGAGTCAAGGATGGAACTTTGG...CTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAGTCACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp GGTTGTAAAGAGGAACAGCCCCTTTTAAGGCAGGTGGAGGAAGAAGAACACCAGCTCATAACCTGGCCTTaGATACAACTGATTGCGATA +
Preference number: 4 (lower is better)
Translates to: GCKEEQPLLRQVEEEEHQLITWP*IQLIAI
Trigger: TATCGCAATCAGTTGTATTCAAGGCCAGGTTATGAG...CTGGTGTTCTTCTTCCTCCACCTGCCTTAAAAGGGGCTGTTCCTCTTTACAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTTCGATCGAAACCAGCTaGACCAGCCAAACCCTGAGC +
Preference number: 4 (lower is better)
Translates to: RVALTSRKVLVESVFCCCSIETS*TSQTLS
Trigger: GCTCAGGGTTTGGCTGGTTCAGCTGGTTTCGATCGA...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTATTGGCCACAGGGGGCTaGCGCTTGTACTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLLATGG*RLYFSS
Trigger: GCTGGAGAAGTACAAGCGGCAGCCCCCTGTGGCCAA...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CTTCAGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGCCTGAGCTCTTTGTATaGTCCTTCCCATCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LQSSLDIQKSPGRKCFLLPELFV*SFPSPS
Trigger: GCTCGGAGATGGGAAGGAGCATACAAAGAGCTCAGG...CAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTCTTGCTACAGGGCCCTaGGGTATCATCTTTGATTCT +
Preference number: 4 (lower is better)
Translates to: KRARKFQSWEMSLGRVFILATGP*GIIFDS
Trigger: AGAATCAAAGATGATACCGCAGGGCCCTGTAGCAAG...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTACCCAGAGCTCAGCACTaGCCAGTCCTCATCGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLPRAQH*PVLIGQ
Trigger: CTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGG...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAACCAGCTGTAGGTCTGTaGGTCCATCTTGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: VHKTRTKRETAEISLKRKPAVGL*VHLAGQ
Trigger: CTGTCCAGCAAGATGGACCCACAGACCTACAGCTGG...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTACTCCCCGACATGAGCTaGAAGAGGGTCTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLLPDMS*KRVCSG
Trigger: CCCACTGCAGACCCTCTTCCAGCTCATGTCGGGGAG...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAACTGGCTCAAGACAGCTaGACCAATGGCTTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: VHKTRTKRETAEISLKRKLAQDS*TNGFAV
Trigger: TACTGCGAAGCCATTGGTGCAGCTGTCTTGAGCCAG...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAATCCCATCTCCGAGCTTaGCTCTCTGGGCAGTATTTC +
Preference number: 4 (lower is better)
Translates to: VHKTRTKRETAEISLKRKSHLRA*LSGQYF
Trigger: GAAATACTGCCCAGAGAGGCAAGCTCGGAGATGGGA...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGAGCTTATACACCTGGAAAGTCTCTGAATTTGTCCTaGGTTTTGAGTAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: RGHNLPDGKHKGAYTPGKSLNLS*VLSKLC
Trigger: GCACAACTTACTCAAAACCCAGGACAAATTCAGAGA...CTTTCCAGGTGTATAAGCTCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTATTCCTCCCTCATTGTaGGAGACTGATAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: KRARKFQSWEMSLGRVFIIPPSL*ETDSSD
Trigger: ATCAGAGCTATCAGTCTCCCACAATGAGGGAGGAAT...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GTACACTGCCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTGCAGTTCCTACTGTTAGATTaGAAGTGGGTCTCACTATTT +
Preference number: 4 (lower is better)
Translates to: VHCLSGRQCGATVKRALQFLLLD*KWVSLF
Trigger: AAATAGTGAGACCCACTTCCAATCTAACAGTAGGAA...CTGCAAAGCCCTTTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CCA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTACACCAGCTGACCTCCTaGCCCGAAACTCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLHQLTS*PETHRN
Trigger: GTTCCTGTGAGTTTCGGGCCAGGAGGTCAGCTGGTG...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTAGCATGGCCCCACAAGTaGTTCTTCATGGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLAWPHK*FFMAHS
Trigger: GGAGTGGGCCATGAAGAACCACTTGTGGGGCCATGC...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAAGTGGGTCCATCTTGCTaGACAGGAACAAAGCATGGC +
Preference number: 4 (lower is better)
Translates to: VHKTRTKRETAEISLKRKVGPSC*TGTKHG
Trigger: GCCATGCTTTGTTCCTGTCCAGCAAGATGGACCCAC...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTGTGGGTCCATCTTGCTaGACAGGAACAAAGCATGGC +
Preference number: 4 (lower is better)
Translates to: RVALTSRKVLVESVFCCCVGPSC*TGTKHG
Trigger: GCCATGCTTTGTTCCTGTCCAGCAAGATGGACCCAC...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTAGCCAATGGTGTCTGTaGTTTGGAAATGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: KRARKFQSWEMSLGRVFISQWCL*FGNDLL
Trigger: CAAGAGGTCATTTCCAAACCACAGACACCATTGGCT...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTCCTTCTCATCCTCCTTaGCTGAACTGGCGGAACTCT +
Preference number: 4 (lower is better)
Translates to: RVALTSRKVLVESVFCCCPSHPP*LNWRNS
Trigger: AGAGTTCCGCCAGTTCAGCCAAGGAGGATGAGAAGG...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR TCA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTATGCTTTGGGACCAGCTaGGGAGACATCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLCFGTS*GDISLN
Trigger: GTTCAGGCTGATGTCTCCTCAGCTGGTCCCAAAGCA...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GAGACTGAATTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCAAGAGGGAAACTGCTaGAATATCATTGAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: ETELCCVLRDPVLLPSKCQEGNC*NIIEEE
Trigger: TTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTG...GCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAATTCAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp TCCCCCTGCTTCCCATTTCTTGCTACAGGGCCCTGCGGTATCATCTTTGATTCTTTGAATACAACTGATTaGGATAACCACCTTCGTAAT +
Preference number: 4 (lower is better)
Translates to: SPCFPFLATGPCGIIFDSLNTTD*DNHLRN
Trigger: ATTACGAAGGTGGTTATCGCAATCAGTTGTATTCAA...AGAATCAAAGATGATACCGCAGGGCCCTGTAGCAAGAAATGGGAAGCAGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CTTCAGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGCCAGTGTCTCAGATTTaGAGCTCTGAGCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LQSSLDIQKSPGRKCFLLPVSQI*SSELLS
Trigger: AGAAAGCAGCTCAGAGCTGCAAATCTGAGACACTGG...CAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTCACGAGGCCATAATCTaGCAGACGGGAAGCATAAAG +
Preference number: 4 (lower is better)
Translates to: RVALTSRKVLVESVFCCCHEAII*QTGSIK
Trigger: CTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTG...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR GCA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAAATCCCCAATGTCTCCTaGTACCTTTTGCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VHKTRTKRETAEISLKRKIPNVS*YLLLQL
Trigger: CAGCTGGAGCAAAAGGTAGCAGGAGACATTGGGGAT...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GAGACTGAATTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCTCTCTGAATTTGTCCTaGGTTTTGAGTAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: ETELCCVLRDPVLLPSKCSLNLS*VLSKLC
Trigger: GCACAACTTACTCAAAACCCAGGACAAATTCAGAGA...GCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAATTCAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GAGACTGAATTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCTGTTAGATTGGAAGTaGGTCTCACTATTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ETELCCVLRDPVLLPSKCLLDWK*VSLFVP
Trigger: TGGAACAAATAGTGAGACCCACTTCCAATCTAACAG...GCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAATTCAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAATTGGAAATGACCTCTTaGCCATCAGGAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VHKTRTKRETAEISLKRKLEMTS*PSGGWE
Trigger: TTCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAA...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp TCCCCCTGCTTCCCATTTCTTGCTACAGGGCCCTGCGGTATCATCTTTGATTCTAATAGAGCCATGTATTaGTCTATTACTAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: SPCFPFLATGPCGIIFDSNRAMY*SITKTG
Trigger: TCCTGTCTTAGTAATAGACCAATACATGGCTCTATT...AGAATCAAAGATGATACCGCAGGGCCCTGTAGCAAGAAATGGGAAGCAGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp TTAGTGACTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGATTTGTCCTGGGTTTTaGGTAAGTTGTGCAGTTATT +
Preference number: 4 (lower is better)
Translates to: LVTLNTYGEGDREIQNREICPGF*VSCAVI
Trigger: AATAACTGCACAACTTACTCAAAACCCAGGACAAAT...CTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAGTCACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTCTAATCTTAAGAGACTaGATTGTGCTGTGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: KRARKFQSWEMSLGRVFILILRD*IVLCLE
Trigger: CTCAAGACACAGCACAATTCAGTCTCTTAAGATTAG...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTCTTCTCATCTCCTCTTaGTCTTCGGAATCATTAAGA +
Preference number: 4 (lower is better)
Translates to: KRARKFQSWEMSLGRVFILLISS*SSESLR
Trigger: TCTTAATGATTCCGAAGAGCAAGAGGAGATGAGAAG...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTTACATCTTCCCTCCATaGTGTGCAGTTCAACAAGGG +
Preference number: 4 (lower is better)
Translates to: RVALTSRKVLVESVFCCCYIFPP*CAVQQG
Trigger: CCCTTGTTGAACTGCACAGCATGGAGGGAAGATGTA...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CCA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTAAGGACTCCGTTGCCTTaGCACTCTTTCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLRTPLP*HSFFLQ
Trigger: CTGCAGGAAGAAAGAGTGCCAAGGCAACGGAGTCCT...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp GAGACTGAATTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCTTCCTACTGTTAGATTaGAAGTGGGTCTCACTATTT +
Preference number: 4 (lower is better)
Translates to: ETELCCVLRDPVLLPSKCFLLLD*KWVSLF
Trigger: AAATAGTGAGACCCACTTCCAATCTAACAGTAGGAA...GCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAATTCAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
3UTR CAA 72 bp CATAGGAGGGGAGACATATTAGCCCATACACACTTATaGTACATTTGGCACAGAAGGGATTCTTTGACAAGC +
Preference number: 4 (lower is better)
Translates to: HRRGDILAHTHL*YIWHRRDSLTS
Trigger: GCTTGTCAAAGAATCCCTTCTGTGCCAAATGTACAATAAGTGTGTATGGGCTAATATGTCTCCCCTCCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR TCA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAACCAAAGTTCCATCCTTaGCTCTCTGAATTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: VHKTRTKRETAEISLKRKPKFHP*LSEFVL
Trigger: CAGGACAAATTCAGAGAGTCAAGGATGGAACTTTGG...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTATCTGTGGTTTGGAAATaGCCTCTTGGCCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLSVVWK*PLGHQE
Trigger: CTCCTGATGGCCAAGAGGTCATTTCCAAACCACAGA...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR GCA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTAAGGAGAACCAAGAGCTaGCACAGTAGAGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLRRTKS*HSRAES
Trigger: AGACTCAGCTCTACTGTGGCAGCTCTTGGTTCTCCT...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR TCA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAACTCATAACCTGGCCTTaGATACAACTGATTGCGATA +
Preference number: 4 (lower is better)
Translates to: VHKTRTKRETAEISLKRKLITWP*IQLIAI
Trigger: TATCGCAATCAGTTGTATTCAAGGCCAGGTTATGAG...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CCA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTAGAAGAACACCAGGGTTaGAGCAGAGCTCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLEEHQG*SRAQRK
Trigger: TTTCCTTTGAGCTCTGCTCCAACCCTGGTGTTCTTC...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp AGTCAGGGCTGTCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTTGGTGGGTCAGGTTGATGAGGTaGGCCACAGGGGGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: SQGCLRSPRLQRGMRSWWVRLMR*ATGGCR
Trigger: GCGGCAGCCCCCTGTGGCCAACCTCATCAACCTGAC...CCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS CCA 90 bp GTCCATCTCTCCGAAACCCTCGGTCTGGATCCTTTGAGGGTGCTGTaGCCTTCCCTCGTGTCTGGGGCAGCCTCTGGGGAGCCCAAAGTT +
Preference number: 5 (lower is better)
Translates to: VHLSETLGLDPLRVL*PSLVSGAASGEPKV
Trigger: AACTTTGGGCTCCCCAGAGGCTGCCCCAGACACGAGGGAAGGCCACAGCACCCTCAAAGGATCCAGACCGAGGGTTTCGGAGAGATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS-3UTR CAA 90 bp GTCCCAGAGCTCAGCACTGGCCAGTCCTCATCGGTCAGGTTGATGAGGTTGGCCTTCAACAAGGGCTGCTaGCCCGTCAGTGGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: VPELSTGQSSSVRLMRLAFNKGC*PVSGRA
Trigger: AGCTCTCCCACTGACGGGCAAGCAGCCCTTGTTGAA...GGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTGTCAGGTTGATGAGGTaGGCCACAGGGGGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGVRLMR*ATGGCR
Trigger: GCGGCAGCCCCCTGTGGCCAACCTCATCAACCTGAC...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp GCTTTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGCTCGGTCTGGATCCTTaGAGGGTGCTGTGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: ALQADCLDSESNSPTPSLLGLDP*RVLWPS
Trigger: GGAAGGCCACAGCACCCTCAAAGGATCCAGACCGAG...CAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp AGCACTGGCCAGTCCTCATCGGTCAGGTTGATGAGGTTGGCCACAGGGGGCTGCAAGGACTCCGTTGCCTaGGCACTCTTTCTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: STGQSSSVRLMRLATGGCKDSVA*ALFLPA
Trigger: TGCAGGAAGAAAGAGTGCCAAGGCAACGGAGTCCTT...GCAGCCCCCTGTGGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp AGTCAGGGCTGTCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTTGGTGGGTCTGTGGGTCCATCTaGCTGGACAGGAACAAAGCA +
Preference number: 5 (lower is better)
Translates to: SQGCLRSPRLQRGMRSWWVCGSI*LDRNKA
Trigger: TGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGAC...CCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp AGTCAGGGCTGTCTGAGGAGTCCTCGTCTCCAGCGGGGGATGCGTTCTTGGTGGCCCCTAAATCAGGAGTaGCTGCTGCTGCTTCTGCTA +
Preference number: 5 (lower is better)
Translates to: SQGCLRSPRLQRGMRSWWPLNQE*LLLLLL
Trigger: TAGCAGAAGCAGCAGCAGCAACTCCTGATTTAGGGG...CCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS CCA 90 bp TCCTTTGAGGGTGCTGTGGCCTTCCCTCGTGTCTGGGGCAGCCTCTaGGGAGCCCAAAGTTCCATCCTTGACTCTCTGAATTTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SFEGAVAFPRVWGSL*GAQSSILDSLNLSW
Trigger: CCAGGACAAATTCAGAGAGTCAAGGATGGAACTTTGGGCTCCCCAGAGGCTGCCCCAGACACGAGGGAAGGCCACAGCACCCTCAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS CCA 90 bp ACCTTCGTAATAGTCAACTCCAGACACAGGCTGATGCCAGTCCCCTaGCCTGGATGCATAATGGGGCTGCTGCTGATGGTCTGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: TFVIVNSRHRLMPVP*PGCIMGLLLMVCPG
Trigger: CCCAGGGCAGACCATCAGCAGCAGCCCCATTATGCATCCAGGCCAGGGGACTGGCATCAGCCTGTGTCTGGAGTTGACTATTACGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS CCA 90 bp CCCGTCAGTGGGAGAGCTGGGACCTACATGCACCAGCTGACCTCCTaGCCCGAAACTCACAGGAACATGAGGGATGTAGAACTTCATGGG +
Preference number: 5 (lower is better)
Translates to: PVSGRAGTYMHQLTS*PETHRNMRDVELHG
Trigger: CCCATGAAGTTCTACATCCCTCATGTTCCTGTGAGTTTCGGGCCAGGAGGTCAGCTGGTGCATGTAGGTCCCAGCTCTCCCACTGACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS-3UTR CAA 90 bp AGGGCCCTAATTTCCCCAAGGCTCTCAAGCCACCACCATAAGTGCCACCACCATCTCGGTCTGGATCCTTaGAGGGTGCTGTGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: RALISPRLSSHHHKCHHHLGLDP*RVLWPS
Trigger: GGAAGGCCACAGCACCCTCAAAGGATCCAGACCGAG...ATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCTTGGGGAAATTAGGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp GTCCCAGAGCTCAGCACTGGCCAGTCCTCATCGGTCAGGTTGATGAGGTTGGCCAACTTCATGGGTGCTTaGGGACCAGCTGAGGAGACA +
Preference number: 5 (lower is better)
Translates to: VPELSTGQSSSVRLMRLANFMGA*GPAEET
Trigger: TGTCTCCTCAGCTGGTCCCAAAGCACCCATGAAGTT...GGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp ATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACTCCTCATCGGTCAGGTaGATGAGGTTGGCCACAGGG +
Preference number: 5 (lower is better)
Translates to: ILSSCLLSARWRHRASTNSSSVR*MRLATG
Trigger: CCCTGTGGCCAACCTCATCAACCTGACCGATGAGGA...GTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp GCTTTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTCCTCATCGGTCAGGTaGATGAGGTTGGCCACAGGG +
Preference number: 5 (lower is better)
Translates to: ALQADCLDSESNSPTPSLSSSVR*MRLATG
Trigger: CCCTGTGGCCAACCTCATCAACCTGACCGATGAGGA...CAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp AGGAAACACTCTCTGGTCCAGACAAGCCTCCAACCCCAGCGCCCGCAGCTGCTCTACTTCTCCAGCTTCTaGCAGTCTTGCATTAGCAGC +
Preference number: 5 (lower is better)
Translates to: RKHSLVQTSLQPQRPQLLYFSSF*QSCISS
Trigger: GCTGCTAATGCAAGACTGCAAGAAGCTGGAGAAGTA...GAGCAGCTGCGGGCGCTGGGGTTGGAGGCTTGTCTGGACCAGAGAGTGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp ATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACTCCTTCTCATCCTCCTaGGCTGAACTGGCGGAACTC +
Preference number: 5 (lower is better)
Translates to: ILSSCLLSARWRHRASTNSFSSS*AELAEL
Trigger: GAGTTCCGCCAGTTCAGCCAAGGAGGATGAGAAGGA...GTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCATTCCCATCTCCGAGCTaGCCTCTCTGGGCAGTATTT +
Preference number: 5 (lower is better)
Translates to: LLSARWRHRASTNLLRVPFPSPS*PLWAVF
Trigger: AAATACTGCCCAGAGAGGCAAGCTCGGAGATGGGAA...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp CTGGCTCCAGGTCCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAGCGGGGGATGCGTTCTaGGTGGGCTTCGATCGAAAC +
Preference number: 5 (lower is better)
Translates to: LAPGPCLHCVFLKPEDLTAGDAF*VGFDRN
Trigger: GTTTCGATCGAAGCCCACCAAGAACGCATCCCCCGC...TGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTCCACGGGGCATCTCCTaGCACAGACCTGCACAGATA +
Preference number: 5 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGPRGIS*HRPAQI
Trigger: TATCTGTGCAGGTCTGTGCAAGGAGATGCCCCGTGG...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp TGCTGTAATGTGGGGCCCACGGGGCATCTCCTTGCACAGACCTGCACAGATAACAACTTCATGGGTGCTTaGGGACCAGCTGAGGAGACA +
Preference number: 5 (lower is better)
Translates to: CCNVGPTGHLLAQTCTDNNFMGA*GPAEET
Trigger: TGTCTCCTCAGCTGGTCCCAAAGCACCCATGAAGTT...GTTATCTGTGCAGGTCTGTGCAAGGAGATGCCCCGTGGGCCCCACATTACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp TTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGTTCAACAAGGGCTGCTaGCCCGTCAGTGGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: LCCVLRDPVLLPSKCPVEFNKGC*PVSGRA
Trigger: AGCTCTCCCACTGACGGGCAAGCAGCCCTTGTTGAA...CTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp GGCCCAGGGCTGCCTAACACGGACCCACAAGCCTCCACATGTAAAATGTTGTTTTTCAACAAGGGCTGCTaGCCCGTCAGTGGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: GPGLPNTDPQASTCKMLFFNKGC*PVSGRA
Trigger: AGCTCTCCCACTGACGGGCAAGCAGCCCTTGTTGAA...AAACAACATTTTACATGTGGAGGCTTGTGGGTCCGTGTTAGGCAGCCCTGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp AGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATCGTTCTGACAGGGGGCTGCCGCTaGTACTTCTCCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RGIERYRTGRASREQIVLTGGCR*YFSSFL
Trigger: CAAGAAGCTGGAGAAGTACAAGCGGCAGCCCCCTGT...CAGAACGATTTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp CTCCTGCTACCTTTTGCTCCAGCTGCCTCCGAAGTTGCGCTAGCCAATCTGGCTTTCCCATCTCCGAGCTaGCCTCTCTGGGCAGTATTT +
Preference number: 5 (lower is better)
Translates to: LLLPFAPAASEVALANLAFPSPS*PLWAVF
Trigger: AAATACTGCCCAGAGAGGCAAGCTCGGAGATGGGAA...AGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp CTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTTGAGGGTCCCACAAACCCTGAGCTCTTaGTATGCTCCTTCCCATCTC +
Preference number: 5 (lower is better)
Translates to: LLSARWRHRASTNLLRVPQTLSS*YAPSHL
Trigger: GAGATGGGAAGGAGCATACAAAGAGCTCAGGGTTTG...TGGGACCCTCAAGAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp GAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACACCTGCGGTATCATCTTaGATTCTAGCTGTTAGGGCC +
Preference number: 5 (lower is better)
Translates to: EILSSCLLSARWRHRASTPAVSS*ILAVRA
Trigger: GGCCCTAACAGCTAGAATCAAAGATGATACCGCAGG...TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp GCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGTCTGCTATCCTGCTTCCCATTTCTaGCTACAGGGCCCTGCGGTA +
Preference number: 5 (lower is better)
Translates to: ATTISATTMSLCSCAVCYPASHF*LQGPAV
Trigger: TACCGCAGGGCCCTGTAGCAAGAAATGGGAAGCAGG...ATAGCAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp AGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATCGTTCTGGCTCCCACGGTTGTCTaGCCATTGGTGAAACCTCTC +
Preference number: 5 (lower is better)
Translates to: RGIERYRTGRASREQIVLAPTVV*PLVKPL
Trigger: GAGAGGTTTCACCAATGGCAAGACAACCGTGGGAGC...CAGAACGATTTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp CTGGCTCCAGGTCCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAGCTCCCACGGTTGTCTaGCCATTGGTGAAACCTCTC +
Preference number: 5 (lower is better)
Translates to: LAPGPCLHCVFLKPEDLTAPTVV*PLVKPL
Trigger: GAGAGGTTTCACCAATGGCAAGACAACCGTGGGAGC...TGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp GAGCGCCAGCGTGCTGGTGAAGCCACTCATGACCCAGCTGTAGGTCTGTGGGTCTCTCATAACCTGGCCTaGAATACAACTGATTGCGAT +
Preference number: 5 (lower is better)
Translates to: ERQRAGEATHDPAVGLWVSHNLA*NTTDCD
Trigger: ATCGCAATCAGTTGTATTCAAGGCCAGGTTATGAGA...GACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACCGCTGCTGGAGAAGGTaGGACTCACTAGCCAATGAT +
Preference number: 5 (lower is better)
Translates to: LQADCLDSESNSPTPSLYRCWRR*DSLAND
Trigger: ATCATTGGCTAGTGAGTCCAACCTTCTCCAGCAGCG...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp GCCACTCATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAACGCTGCTGGAGAAGGTaGGACTCACTAGCCAATGAT +
Preference number: 5 (lower is better)
Translates to: ATHDPAVGLWVHLAGQEQRCWRR*DSLAND
Trigger: ATCATTGGCTAGTGAGTCCAACCTTCTCCAGCAGCG...TTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp AGGGCCCTAATTTCCCCAAGGCTCTCAAGCCACCACCATAAGTGCCACCACCATAACTTCATGGGTGCTTaGGGACCAGCTGAGGAGACA +
Preference number: 5 (lower is better)
Translates to: RALISPRLSSHHHKCHHHNFMGA*GPAEET
Trigger: TGTCTCCTCAGCTGGTCCCAAAGCACCCATGAAGTT...ATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCTTGGGGAAATTAGGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp CTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAACCTCTACTTCTCCAGCTTCTaGCAGTCTTGCATTAGCAGC +
Preference number: 5 (lower is better)
Translates to: LSSCLLSARWRHRASTNLYFSSF*QSCISS
Trigger: GCTGCTAATGCAAGACTGCAAGAAGCTGGAGAAGTA...GAGGTTTGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACGTCTGTGGGTCCATCTaGCTGGACAGGAACAAAGCA +
Preference number: 5 (lower is better)
Translates to: LQADCLDSESNSPTPSLYVCGSI*LDRNKA
Trigger: TGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGAC...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp GAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAAAGTGTTTTCTGTTGTaGTTCCTCCGGCTCCCGAAA +
Preference number: 5 (lower is better)
Translates to: EILSSCLLSARWRHRASTKCFLL*FLRLPK
Trigger: TTTCGGGAGCCGGAGGAACAACAACAGAAAACACTT...TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp CTGGCTCCAGGTCCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACATCCTTCTCATCCTCCTaGGCTGAACTGGCGGAACTC +
Preference number: 5 (lower is better)
Translates to: LAPGPCLHCVFLKPEDLTSFSSS*AELAEL
Trigger: GAGTTCCGCCAGTTCAGCCAAGGAGGATGAGAAGGA...TGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp GCATCAGCCCACCTCTTTGCAGAGGAGGACCTGTGGCCTGAGGCCCCCGCCAATAATTTGTCCTGGGTTTaGAGTAAGTTGTGCAGTTAT +
Preference number: 5 (lower is better)
Translates to: ASAHLFAEEDLWPEAPANNLSWV*SKLCSY
Trigger: ATAACTGCACAACTTACTCAAAACCCAGGACAAATT...ATTGGCGGGGGCCTCAGGCCACAGGTCCTCCTCTGCAAAGAGGTGGGCTGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp GGCCCAGGGCTGCCTAACACGGACCCACAAGCCTCCACATGTAAAATGTTGTTTAAGGACTCCGTTGCCTaGGCACTCTTTCTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: GPGLPNTDPQASTCKMLFKDSVA*ALFLPA
Trigger: TGCAGGAAGAAAGAGTGCCAAGGCAACGGAGTCCTT...AAACAACATTTTACATGTGGAGGCTTGTGGGTCCGTGTTAGGCAGCCCTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp GGTTGTAAAGAGGAACAGCCCCTTTTAAGGCAGGTGGAGGAAGAAGAACACCAGACAGGGGGCTGCCGCTaGTACTTCTCCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GCKEEQPLLRQVEEEEHQTGGCR*YFSSFL
Trigger: CAAGAAGCTGGAGAAGTACAAGCGGCAGCCCCCTGT...CTGGTGTTCTTCTTCCTCCACCTGCCTTAAAAGGGGCTGTTCCTCTTTACAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp GGTTGTAAAGAGGAACAGCCCCTTTTAAGGCAGGTGGAGGAAGAAGAACACCAGTCCTCATCGGTCAGGTaGATGAGGTTGGCCACAGGG +
Preference number: 5 (lower is better)
Translates to: GCKEEQPLLRQVEEEEHQSSSVR*MRLATG
Trigger: CCCTGTGGCCAACCTCATCAACCTGACCGATGAGGA...CTGGTGTTCTTCTTCCTCCACCTGCCTTAAAAGGGGCTGTTCCTCTTTACAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp TTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGTCTGTGGGTCCATCTaGCTGGACAGGAACAAAGCA +
Preference number: 5 (lower is better)
Translates to: LCCVLRDPVLLPSKCPVEVCGSI*LDRNKA
Trigger: TGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGAC...CTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp GTCCCAGAGCTCAGCACTGGCCAGTCCTCATCGGTCAGGTTGATGAGGTTGGCCAGTTTCTCTGCTAGCTaGATGAGTTCCACTAATAGC +
Preference number: 5 (lower is better)
Translates to: VPELSTGQSSSVRLMRLASFSAS*MSSTNS
Trigger: GCTATTAGTGGAACTCATCAAGCTAGCAGAGAAACT...GGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp GGTTGTAAAGAGGAACAGCCCCTTTTAAGGCAGGTGGAGGAAGAAGAACACCAGGTCTCCTGCTACCTTTaGCTCCAGCTGCCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: GCKEEQPLLRQVEEEEHQVSCYL*LQLPPK
Trigger: CTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGAC...CTGGTGTTCTTCTTCCTCCACCTGCCTTAAAAGGGGCTGTTCCTCTTTACAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp TTTTCTCCACAACACGTGGCTGCCTGTGGAATCCTCCCCGACATGAGCTGGAAGGGCTTCAGAGTAGCCTaGACATCCAGAAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: FSPQHVAACGILPDMSWKGFRVA*TSRKVL
Trigger: CAGGACTTTTCTGGATGTCAAGGCTACTCTGAAGCC...CTTCCAGCTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp GAGCGCCAGCGTGCTGGTGAAGCCACTCATGACCCAGCTGTAGGTCTGTGGGTCTTTTATCTTCATCGATaGCCCCTAAATCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: ERQRAGEATHDPAVGLWVFYLHR*PLNQEL
Trigger: CAACTCCTGATTTAGGGGCAATCGATGAAGATAAAA...GACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp GAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGGCATCGGGCTAGCACAACTTCTCATCTCCTCTaGCTCTTCGGAATCATTAAG +
Preference number: 5 (lower is better)
Translates to: EILSSCLLSARWRHRASTTSHLL*LFGIIK
Trigger: CTTAATGATTCCGAAGAGCAAGAGGAGATGAGAAGT...TGTGCTAGCCCGATGCCTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp GGCTTCGATCGAAACCAGCTGAACCAGCCAAACCCTGAGCTCTTTGTATGCTCCAGAAAGTGTTTTCTGTaGTTGTTCCTCCGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GFDRNQLNQPNPELFVCSRKCFL*LFLRLP
Trigger: CGGGAGCCGGAGGAACAACAACAGAAAACACTTTCT...GGAGCATACAAAGAGCTCAGGGTTTGGCTGGTTCAGCTGGTTTCGATCGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp AGGCTCTCAAGCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAATGGTGTCTGTGGTTaGGAAATGACCTCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: RLSSHHHKCHHHVTLLMCNGVCG*EMTSWP
Trigger: TGGCCAAGAGGTCATTTCCAAACCACAGACACCATT...GCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp CATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAAGCATGCAAACCCTGAGCTCTTaGTATGCTCCTTCCCATCTC +
Preference number: 5 (lower is better)
Translates to: HDPAVGLWVHLAGQEQSMQTLSS*YAPSHL
Trigger: GAGATGGGAAGGAGCATACAAAGAGCTCAGGGTTTG...CATGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTGCGGGGGATGCGTTCTaGGTGGGCTTCGATCGAAAC +
Preference number: 5 (lower is better)
Translates to: KRARKFQSWEMSLGRVFIAGDAF*VGFDRN
Trigger: GTTTCGATCGAAGCCCACCAAGAACGCATCCCCCGC...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp AGGCTCTCAAGCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCGAATTGTGCTGTGTCTaGAGAGATCCTGTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: RLSSHHHKCHHHVTLLMCELCCV*RDPVLL
Trigger: CAAGAGGACAGGATCTCTCAAGACACAGCACAATTC...GCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp AGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATCGTTCTGTCATCTCCCTGTGCCTaGGTTTTCCTCCTCCATAAG +
Preference number: 5 (lower is better)
Translates to: RGIERYRTGRASREQIVLSSPCA*VFLLHK
Trigger: CTTATGGAGGAGGAAAACCAAGGCACAGGGAGATGA...CAGAACGATTTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp TTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGACGGTTGTCTTGCCATaGGTGAAACCTCTCTCCATT +
Preference number: 5 (lower is better)
Translates to: LCCVLRDPVLLPSKCPVETVVLP*VKPLSI
Trigger: AATGGAGAGAGGTTTCACCAATGGCAAGACAACCGT...CTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp CTCTTAACACGTATGGGGAGGGGGATAGAGAGATACAGAACAGGGAGGGCCTCTCATATTCCTCCCTCATaGTGGGAGACTGATAGCTCT +
Preference number: 5 (lower is better)
Translates to: LLTRMGRGIERYRTGRASHIPPS*WETDSS
Trigger: AGAGCTATCAGTCTCCCACAATGAGGGAGGAATATG...AGAGGCCCTCCCTGTTCTGTATCTCTCTATCCCCCTCCCCATACGTGTTAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTAGTGGGTCTCACTATTaGTTCCAAATGGACTGTGCT +
Preference number: 5 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGSGSHY*FQMDCA
Trigger: AGCACAGTCCATTTGGAACAAATAGTGAGACCCACT...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp GCTTTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGACTTCTCATCTCCTCTaGCTCTTCGGAATCATTAAG +
Preference number: 5 (lower is better)
Translates to: ALQADCLDSESNSPTPSLTSHLL*LFGIIK
Trigger: CTTAATGATTCCGAAGAGCAAGAGGAGATGAGAAGT...CAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp GGCCCAGGGCTGCCTAACACGGACCCACAAGCCTCCACATGTAAAATGTTGTTTTACTTCTCCAGCTTCTaGCAGTCTTGCATTAGCAGC +
Preference number: 5 (lower is better)
Translates to: GPGLPNTDPQASTCKMLFYFSSF*QSCISS
Trigger: GCTGCTAATGCAAGACTGCAAGAAGCTGGAGAAGTA...AAACAACATTTTACATGTGGAGGCTTGTGGGTCCGTGTTAGGCAGCCCTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTACAGGGGGCTGCCGCTaGTACTTCTCCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: KRARKFQSWEMSLGRVFITGGCR*YFSSFL
Trigger: CAAGAAGCTGGAGAAGTACAAGCGGCAGCCCCCTGT...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp CTACAGGGCCCTGCGGTATCATCTTTGATTCTAGCTGTTAGGGCCCTAATTTCCTTTGGAAATGACCTCTaGGCCATCAGGAGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: LQGPAVSSLILAVRALISFGNDL*AIRRLG
Trigger: TCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAAA...GGAAATTAGGGCCCTAACAGCTAGAATCAAAGATGATACCGCAGGGCCCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp TTGCAGGCTGACTGCCTGGATTCCGAATCCAACTCACCCACACCCTCACTGTACGCCCATACACACTTATaGTACATTTGGCACAGAAGG +
Preference number: 5 (lower is better)
Translates to: LQADCLDSESNSPTPSLYAHTHL*YIWHRR
Trigger: CCTTCTGTGCCAAATGTACAATAAGTGTGTATGGGC...GTACAGTGAGGGTGTGGGTGAGTTGGATTCGGAATCCAGGCAGTCAGCCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS TCA 90 bp ACTGAAATACAAGACAGTGAGGTAACCTTGCCCAAAGTTACAGGGTaGGCTACGGATGAGCCAGGATGCAAGACTAAGCAGTGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: TEIQDSEVTLPKVTG*ATDEPGCKTKQCGS
Trigger: GGAGCCACACTGCTTAGTCTTGCATCCTGGCTCATCCGTAGCTCACCCTGTAACTTTGGGCAAGGTTACCTCACTGTCTTGTATTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441371.1
CDS-3UTR CAA 90 bp TGGAAGGAACAGGCAATGAGCTGGGTACACTGCCTCAGTGGTAGGCAGTGTGGTTCTCATAACCTGGCCTaGAATACAACTGATTGCGAT +
Preference number: 5 (lower is better)
Translates to: WKEQAMSWVHCLSGRQCGSHNLA*NTTDCD
Trigger: ATCGCAATCAGTTGTATTCAAGGCCAGGTTATGAGA...ACCACACTGCCTACCACTGAGGCAGTGTACCCAGCTCATTGCCTGTTCCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp GAGACTGAATTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCAAGGACTCCGTTGCCTaGGCACTCTTTCTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: ETELCCVLRDPVLLPSKCKDSVA*ALFLPA
Trigger: TGCAGGAAGAAAGAGTGCCAAGGCAACGGAGTCCTT...GCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAATTCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp TCTCCGAGCTTGCCTCTCTGGGCAGTATTTCGGGGAGAGTTTTTATCAGCCTCAGATATAAGGACTCCGTaGCCTTGGCACTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: SPSLPLWAVFRGEFLSASDIRTP*PWHSFF
Trigger: GAAGAAAGAGTGCCAAGGCAACGGAGTCCTTATATC...TGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp TTTTCTCCACAACACGTGGCTGCCTGTGGAATCCTCCCCGACATGAGCTGGAAGTTCATCAAGGTACTTTaGCTCTCGGTAATCTTCGTG +
Preference number: 5 (lower is better)
Translates to: FSPQHVAACGILPDMSWKFIKVL*LSVIFV
Trigger: CACGAAGATTACCGAGAGCAAAAGTACCTTGATGAA...CTTCCAGCTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp CTGGCTCCAGGTCCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAAGTGGGTCTCACTATTaGTTCCAAATGGACTGTGCT +
Preference number: 5 (lower is better)
Translates to: LAPGPCLHCVFLKPEDLTSGSHY*FQMDCA
Trigger: AGCACAGTCCATTTGGAACAAATAGTGAGACCCACT...TGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp GCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAGTCTGCTATAAATTTCAAAAACTCTaGACTGTGGCTGCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: ATTISATTMSLCSCAVCYKFQKL*TVAAAQ
Trigger: CTGGGCAGCAGCCACAGTCAAGAGTTTTTGAAATTT...ATAGCAGACTGCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp GCCAATGGTGTCTGTGGTTTGGAAATGACCTCTTGGCCATCAGGAGGCTGGGAAAAATTTCAAAAACTCTaGACTGTGGCTGCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: ANGVCGLEMTSWPSGGWEKFQKL*TVAAAQ
Trigger: CTGGGCAGCAGCCACAGTCAAGAGTTTTTGAAATTT...TTCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAAACCACAGACACCATTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp TTGTGCTGTGTCTTGAGAGATCCTGTCCTCTTGCCTTCTAAGTGCCCGGTGGAGTTTCCGTCCTCTGGATaGCCTCAGTTGTTGCAAATT +
Preference number: 5 (lower is better)
Translates to: LCCVLRDPVLLPSKCPVEFPSSG*PQLLQI
Trigger: AATTTGCAACAACTGAGGCAATCCAGAGGACGGAAA...CTCCACCGGGCACTTAGAAGGCAAGAGGACAGGATCTCTCAAGACACAGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp CATGACCCAGCTGTAGGTCTGTGGGTCCATCTTGCTGGACAGGAACAAAGCATGTTTCCGTCCTCTGGATaGCCTCAGTTGTTGCAAATT +
Preference number: 5 (lower is better)
Translates to: HDPAVGLWVHLAGQEQSMFPSSG*PQLLQI
Trigger: AATTTGCAACAACTGAGGCAATCCAGAGGACGGAAA...CATGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp AATGCAAAGCCTGGGACACGAGGCCATAATCTGCCAGACGGGAAGCATAAAGGAAAGTGTTTTCTGTTGTaGTTCCTCCGGCTCCCGAAA +
Preference number: 5 (lower is better)
Translates to: NAKPGTRGHNLPDGKHKGKCFLL*FLRLPK
Trigger: TTTCGGGAGCCGGAGGAACAACAACAGAAAACACTT...TCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp CCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAGCTTCAGTTTCTTTTGGAAATGACCTCTaGGCCATCAGGAGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: PCLHCVFLKPEDLTASVSFGNDL*AIRRLG
Trigger: TCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAAA...AGAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp AGGGCCCTAATTTCCCCAAGGCTCTCAAGCCACCACCATAAGTGCCACCACCATCTACAGCAATCTAACTaGATAGCCACATGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: RALISPRLSSHHHKCHHHLQQSN*IATCQN
Trigger: ATTCTGGCATGTGGCTATCAAGTTAGATTGCTGTAG...ATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCTTGGGGAAATTAGGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS TCA 90 bp GGGAGATTGAGAAAAAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATaGGCCTGGGACGTGTGTTTATTCTCAGCATGGCTGGGTGGGATA +
Preference number: 5 (lower is better)
Translates to: GRLRKREQESFSPGR*AWDVCLFSAWLGGI
Trigger: TATCCCACCCAGCCATGCTGAGAATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTTTTTCTCAATCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308284.10
ENST00000495165.5
CDS-3UTR CAA 90 bp AGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATCGTTCTGTCCATGCATTCAACGGTTGTCTTGCCATaGGTGAAACCTCTCTCCATT +
Preference number: 5 (lower is better)
Translates to: RYRTGRASREQIVLSMHSTVVLP*VKPLSI
Trigger: AATGGAGAGAGGTTTCACCAATGGCAAGACAACCGT...TGAATGCATGGACAGAACGATTTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp CTACAGGGCCCTGCGGTATCATCTTTGATTCTAGCTGTTAGGGCCCTAATTTCCGATATAAGGACTCCGTaGCCTTGGCACTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LQGPAVSSLILAVRALISDIRTP*PWHSFF
Trigger: GAAGAAAGAGTGCCAAGGCAACGGAGTCCTTATATC...GGAAATTAGGGCCCTAACAGCTAGAATCAAAGATGATACCGCAGGGCCCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp AGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATCGTTCTGTCCATGCATTCAGATATAAGGACTCCGTaGCCTTGGCACTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RYRTGRASREQIVLSMHSDIRTP*PWHSFF
Trigger: GAAGAAAGAGTGCCAAGGCAACGGAGTCCTTATATC...TGAATGCATGGACAGAACGATTTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTCGCTGCTGGAGAAGGTaGGACTCACTAGCCAATGAT +
Preference number: 5 (lower is better)
Translates to: KRARKFQSWEMSLGRVFIRCWRR*DSLAND
Trigger: ATCATTGGCTAGTGAGTCCAACCTTCTCCAGCAGCG...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTAGTCAGGTTGATGAGGTaGGCCACAGGGGGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLVRLMR*ATGGCR
Trigger: GCGGCAGCCCCCTGTGGCCAACCTCATCAACCTGAC...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp AGGCTCTCAAGCCACCACCATAAGTGCCACCACCATGTCACTCTGCTCATGTGCAATTTGTCCTGGGTTTaGAGTAAGTTGTGCAGTTAT +
Preference number: 5 (lower is better)
Translates to: RLSSHHHKCHHHVTLLMCNLSWV*SKLCSY
Trigger: ATAACTGCACAACTTACTCAAAACCCAGGACAAATT...GCACATGAGCAGAGTGACATGGTGGTGGCACTTATGGTGGTGGCTTGAGAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp CCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAGCTTCAGTTTCTCATATTCCTCCCTCATaGTGGGAGACTGATAGCTCT +
Preference number: 5 (lower is better)
Translates to: PCLHCVFLKPEDLTASVSHIPPS*WETDSS
Trigger: AGAGCTATCAGTCTCCCACAATGAGGGAGGAATATG...AGAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp GTACACTGCCTCAGTGGTAGGCAGTGTGGTGCAACAGTTAAAAGGGCTTTGCAGGTTCCTACTGTTAGATaGGAAGTGGGTCTCACTATT +
Preference number: 5 (lower is better)
Translates to: VHCLSGRQCGATVKRALQVPTVR*EVGLTI
Trigger: AATAGTGAGACCCACTTCCAATCTAACAGTAGGAAC...CTGCAAAGCCCTTTTAACTGTTGCACCACACTGCCTACCACTGAGGCAGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAAGTCTCCTGCTACCTTTaGCTCCAGCTGCCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: VHKTRTKRETAEISLKRKVSCYL*LQLPPK
Trigger: CTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGAC...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTCATATTCCTCCCTCATaGTGGGAGACTGATAGCTCT +
Preference number: 5 (lower is better)
Translates to: KRARKFQSWEMSLGRVFIHIPPS*WETDSS
Trigger: AGAGCTATCAGTCTCCCACAATGAGGGAGGAATATG...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp AGATACAGAACAGGGAGGGCCTCTAGGGAGCAAATCGTTCTGTCCATGCATTCATTCATCAAGGTACTTTaGCTCTCGGTAATCTTCGTG +
Preference number: 5 (lower is better)
Translates to: RYRTGRASREQIVLSMHSFIKVL*LSVIFV
Trigger: CACGAAGATTACCGAGAGCAAAAGTACCTTGATGAA...TGAATGCATGGACAGAACGATTTGCTCCCTAGAGGCCCTCCCTGTTCTGTATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS-3UTR CAA 90 bp GGTTGTAAAGAGGAACAGCCCCTTTTAAGGCAGGTGGAGGAAGAAGAACACCAGGTTCCTACTGTTAGATaGGAAGTGGGTCTCACTATT +
Preference number: 5 (lower is better)
Translates to: GCKEEQPLLRQVEEEEHQVPTVR*EVGLTI
Trigger: AATAGTGAGACCCACTTCCAATCTAACAGTAGGAAC...CTGGTGTTCTTCTTCCTCCACCTGCCTTAAAAGGGGCTGTTCCTCTTTACAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS GCA 90 bp CCTTGCCTTCAAACGCATTCCATTGCAACATTCACAGTCCTTTCCTaGCTCCAAATCAAGAGCATGGAGAAGCAGGAAGAATTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: PCLQTHSIATFTVLS*LQIKSMEKQEEFPS
Trigger: TGAAGGAAATTCTTCCTGCTTCTCCATGCTCTTGATTTGGAGGCAGGAAAGGACTGTGAATGTTGCAATGGAATGCGTTTGAAGGCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441371.1
CDS-3UTR CAA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTAGCTCCCACGGTTGTCTaGCCATTGGTGAAACCTCTC +
Preference number: 5 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLAPTVV*PLVKPL
Trigger: GAGAGGTTTCACCAATGGCAAGACAACCGTGGGAGC...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTTTCATCAAGGTACTTTaGCTCTCGGTAATCTTCGTG +
Preference number: 5 (lower is better)
Translates to: KRARKFQSWEMSLGRVFIFIKVL*LSVIFV
Trigger: CACGAAGATTACCGAGAGCAAAAGTACCTTGATGAA...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp AAGAGAGCAAGAAAGTTTCAGTCCTGGGAGATGAGCCTGGGACGTGTGTTTATTGTTCCTACTGTTAGATaGGAAGTGGGTCTCACTATT +
Preference number: 5 (lower is better)
Translates to: KRARKFQSWEMSLGRVFIVPTVR*EVGLTI
Trigger: AATAGTGAGACCCACTTCCAATCTAACAGTAGGAAC...AATAAACACACGTCCCAGGCTCATCTCCCAGGACTGAAACTTTCTTGCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAAGGCTTCAGAGTAGCCTaGACATCCAGAAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: VHKTRTKRETAEISLKRKGFRVA*TSRKVL
Trigger: CAGGACTTTTCTGGATGTCAAGGCTACTCTGAAGCC...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS GCA 90 bp CATCCTCTTAATCTTCACAGGAACCCTATGAAGTCTAGTTCCTACTaGCACTTTAAGAATAAGAAAATCAAGCCAAGTGGCCCAGCTAGG +
Preference number: 5 (lower is better)
Translates to: HPLNLHRNPMKSSSY*HFKNKKIKPSGPAR
Trigger: CCTAGCTGGGCCACTTGGCTTGATTTTCTTATTCTTAAAGTGGCAGTAGGAACTAGACTTCATAGGGTTCCTGTGAAGATTAAGAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327037.8
CDS CCA 90 bp ACTTTATGGAGTCTTCGTAGTATCAGCCACTTGGAAGATGCTTCATaGAGAGGCTGTCTTCTGCGTAATCTTCTCTTGGCAATAAAGAGT +
Preference number: 5 (lower is better)
Translates to: TLWSLRSISHLEDAS*RGCLLRNLLLAIKS
Trigger: ACTCTTTATTGCCAAGAGAAGATTACGCAGAAGACAGCCTCTCCATGAAGCATCTTCCAAGTGGCTGATACTACGAAGACTCCATAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441371.1
CDS-3UTR CAA 90 bp CCCTGTCTCCACTGCGTCTTTCTAAAACCAGAGGATCTGACAGCTTCAGTTTCTAATTTGTCCTGGGTTTaGAGTAAGTTGTGCAGTTAT +
Preference number: 5 (lower is better)
Translates to: PCLHCVFLKPEDLTASVSNLSWV*SKLCSY
Trigger: ATAACTGCACAACTTACTCAAAACCCAGGACAAATT...AGAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTACGGTTGTCTTGCCATaGGTGAAACCTCTCTCCATT +
Preference number: 5 (lower is better)
Translates to: RVALTSRKVLVESVFCCCTVVLP*VKPLSI
Trigger: AATGGAGAGAGGTTTCACCAATGGCAAGACAACCGT...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS-3UTR CAA 90 bp AGAGTAGCCTTGACATCCAGAAAAGTCCTGGTAGAAAGTGTTTTCTGTTGTTGTAATGGTGTCTGTGGTTaGGAAATGACCTCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: RVALTSRKVLVESVFCCCNGVCG*EMTSWP
Trigger: TGGCCAAGAGGTCATTTCCAAACCACAGACACCATT...ACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS TCA 90 bp TGCCATCCATCTGCATCATTAGGTTCAGTAGTTACCATGACAATATaGTGCCTACAGCAATCTAACTTGATAGCCACATGCCAGAATGTG +
Preference number: 5 (lower is better)
Translates to: CHPSASLGSVVTMTI*CLQQSNLIATCQNV
Trigger: CACATTCTGGCATGTGGCTATCAAGTTAGATTGCTGTAGGCATCATATTGTCATGGTAACTACTGAACCTAATGATGCAGATGGATGGCA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495165.5
CDS-3UTR CAA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAAAGTGGGTCTCACTATTaGTTCCAAATGGACTGTGCT +
Preference number: 5 (lower is better)
Translates to: VHKTRTKRETAEISLKRKSGSHY*FQMDCA
Trigger: AGCACAGTCCATTTGGAACAAATAGTGAGACCCACT...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTAAGAAAGTGTTTTCTGTaGTTGTTCCTCCGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLRKCFL*LFLRLP
Trigger: CGGGAGCCGGAGGAACAACAACAGAAAACACTTTCT...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS-3UTR CAA 90 bp GTGCACAAAACTAGGACCAAGAGGGAAACTGCTGAAATATCATTGAAGAGGAAAAGTTTCTCTGCTAGCTaGATGAGTTCCACTAATAGC +
Preference number: 5 (lower is better)
Translates to: VHKTRTKRETAEISLKRKSFSAS*MSSTNS
Trigger: GCTATTAGTGGAACTCATCAAGCTAGCAGAGAAACT...TTTCCTCTTCAATGATATTTCAGCAGTTTCCCTCTTGGTCCTAGTTTTGTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS TCA 90 bp CAAAGCCCATTCACACACATCCTCTTAATCTTCACAGGAACCCTATaGAGTCTAGTTCCTACTGCCACTTTAAGAATAAGAAAATCAAGC +
Preference number: 5 (lower is better)
Translates to: QSPFTHILLIFTGTL*SLVPTATLRIRKSS
Trigger: GCTTGATTTTCTTATTCTTAAAGTGGCAGTAGGAACTAGACTTCATAGGGTTCCTGTGAAGATTAAGAGGATGTGTGTGAATGGGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327037.8
CDS-3UTR CAA 90 bp CTATTAGACCCAGACTTTCCACCTGATGAAATAATTTCCATCATTGTGAAGCTATCTCATAACCTGGCCTaGAATACAACTGATTGCGAT +
Preference number: 5 (lower is better)
Translates to: LLDPDFPPDEIISIIVKLSHNLA*NTTDCD
Trigger: ATCGCAATCAGTTGTATTCAAGGCCAGGTTATGAGA...TAGCTTCACAATGATGGAAATTATTTCATCAGGTGGAAAGTCTGGGTCTAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308284.10
CDS TCA 90 bp CCTAGATTCCTCATTAACAAAGGGCTCTTTCCAGCTATTCACACTTaGTCACACAATAAAACCATTATTAGAAAGACTTCAGGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: PRFLINKGLFPAIHT*SHNKTIIRKTSGKR
Trigger: TCTCTTCCCTGAAGTCTTTCTAATAATGGTTTTATTGTGTGATCAAGTGTGAATAGCTGGAAAGAGCCCTTTGTTAATGAGGAATCTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495165.5
CDS TCA 90 bp TTAGATTGCAAATTAACAATAAAAGACACTGTAATAAAGTACAGTTaGGCTTTGAACAATGTGGACATGATGGGCACTGAGCCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: LDCKLTIKDTVIKYS*ALNNVDMMGTEPCK
Trigger: TTTGCAGGGCTCAGTGCCCATCATGTCCACATTGTTCAAAGCTCAACTGTACTTTATTACAGTGTCTTTTATTGTTAATTTGCAATCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495165.5
CDS CCA 72 bp TCCGAAACCCTCGGTCTGGATCCTTTGAGGGTGCTGTaGCCTTCCCTCGTGTCTGGGGCAGCCTCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: SETLGLDPLRVL*PSLVSGAASGE
Trigger: CTCCCCAGAGGCTGCCCCAGACACGAGGGAAGGCCACAGCACCCTCAAAGGATCCAGACCGAGGGTTTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS CAA 90 bp CAGGCCGATGATGTCCATCTCTCCGAAACCCTCGGTCTGGATCCTTaGAGGGTGCTGTGGCCTTCCCTCGTGTCTGGGGCAGCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: QADDVHLSETLGLDP*RVLWPSLVSGAASG
Trigger: CCCAGAGGCTGCCCCAGACACGAGGGAAGGCCACAGCACCCTCAAAGGATCCAGACCGAGGGTTTCGGAGAGATGGACATCATCGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS CCA 72 bp GTTCAACAAGGGCTGCTTGCCCGTCAGTGGGAGAGCTaGGACCTACATGCACCAGCTGACCTCCTGGCCCGA +
Preference number: 6 (lower is better)
Translates to: VQQGLLARQWES*DLHAPADLLAR
Trigger: TCGGGCCAGGAGGTCAGCTGGTGCATGTAGGTCCCAGCTCTCCCACTGACGGGCAAGCAGCCCTTGTTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS CCA 72 bp CAACTCCAGACACAGGCTGATGCCAGTCCCCTGGCCTaGATGCATAATGGGGCTGCTGCTGATGGTCTGCCC +
Preference number: 6 (lower is better)
Translates to: QLQTQADASPLA*MHNGAAADGLP
Trigger: GGGCAGACCATCAGCAGCAGCCCCATTATGCATCCAGGCCAGGGGACTGGCATCAGCCTGTGTCTGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS TCA 72 bp GGAGACATCTTCAGCCTGAACTGGACTCCAAGCTGCTaGAGCTGGGGGATCATCCCGCTCCGGGGCATCTCT +
Preference number: 6 (lower is better)
Translates to: GDIFSLNWTPSC*SWGIIPLRGIS
Trigger: AGAGATGCCCCGGAGCGGGATGATCCCCCAGCTTCAGCAGCTTGGAGTCCAGTTCAGGCTGAAGATGTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS CAA 72 bp GATGTCCATCTCTCCGAAACCCTCGGTCTGGATCCTTaGAGGGTGCTGTGGCCTTCCCTCGTGTCTGGGGCA +
Preference number: 6 (lower is better)
Translates to: DVHLSETLGLDP*RVLWPSLVSGA
Trigger: TGCCCCAGACACGAGGGAAGGCCACAGCACCCTCAAAGGATCCAGACCGAGGGTTTCGGAGAGATGGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS GCA 72 bp ATAACCTCCATGCTGTGCAGTTCAACAAGGGCTGCTTaGCCGTCAGTGGGAGAGCTGGGACCTACATGCACC +
Preference number: 6 (lower is better)
Translates to: ITSMLCSSTRAA*PSVGELGPTCT
Trigger: GGTGCATGTAGGTCCCAGCTCTCCCACTGACGGGCAAGCAGCCCTTGTTGAACTGCACAGCATGGAGGTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308284.10
ENST00000464631.6
CDS CCA 72 bp ATAGTCAACTCCAGACACAGGCTGATGCCAGTCCCCTaGCCTGGATGCATAATGGGGCTGCTGCTGATGGTC +
Preference number: 6 (lower is better)
Translates to: IVNSRHRLMPVP*PGCIMGLLLMV
Trigger: GACCATCAGCAGCAGCCCCATTATGCATCCAGGCCAGGGGACTGGCATCAGCCTGTGTCTGGAGTTGACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS CCA 72 bp GGGAGAGCTGGGACCTACATGCACCAGCTGACCTCCTaGCCCGAAACTCACAGGAACATGAGGGATGTAGAA +
Preference number: 6 (lower is better)
Translates to: GRAGTYMHQLTS*PETHRNMRDVE
Trigger: TTCTACATCCCTCATGTTCCTGTGAGTTTCGGGCCAGGAGGTCAGCTGGTGCATGTAGGTCCCAGCTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS CCA 72 bp AGCCTGGGACGTGTGTTTATTCTCAGCATGGCTGGGTaGGATAGCGACGCTGAGCTAGGCGATTTGGCCGAT +
Preference number: 6 (lower is better)
Translates to: SLGRVFILSMAG*DSDAELGDLAD
Trigger: ATCGGCCAAATCGCCTAGCTCAGCGTCGCTATCCCACCCAGCCATGCTGAGAATAAACACACGTCCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000327037.8
ENST00000495165.5
CDS GCA 72 bp TACTGTTTCCTTTCTCCCAGGTCGCATACCTGTGGCTaGTGCCCAGCAAGACCAGATGGTCTGTCTTCACGG +
Preference number: 6 (lower is better)
Translates to: YCFLSPRSHTCG*CPARPDGLSSR
Trigger: CCGTGAAGACAGACCATCTGGTCTTGCTGGGCAGCAGCCACAGGTATGCGACCTGGGAGAAAGGAAACAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS CAA 72 bp AATAACCTCCATGCTGTGCAGTTCAACAAGGGCTGCTaGCCCGTCAGTGGGAGAGCTGGGACCTACATGCAC +
Preference number: 6 (lower is better)
Translates to: NNLHAVQFNKGC*PVSGRAGTYMH
Trigger: GTGCATGTAGGTCCCAGCTCTCCCACTGACGGGCAAGCAGCCCTTGTTGAACTGCACAGCATGGAGGTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308284.10
ENST00000464631.6
CDS CAA 90 bp ATCATTAAGAATAACCTCCATGCTGTGCAGTTCAACAAGGGCTGCTaGCCCGTCAGTGGGAGAGCTGGGACCTACATGCACCAGCTGACC +
Preference number: 6 (lower is better)
Translates to: IIKNNLHAVQFNKGC*PVSGRAGTYMHQLT
Trigger: GGTCAGCTGGTGCATGTAGGTCCCAGCTCTCCCACTGACGGGCAAGCAGCCCTTGTTGAACTGCACAGCATGGAGGTTATTCTTAATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308284.10
ENST00000464631.6
CDS TCA 72 bp AGGGATGTAGAACTTCATGGGTGCTTTGGGACCAGCTaGGGAGACATCTTCAGCCTGAACTGGACTCCAAGC +
Preference number: 6 (lower is better)
Translates to: RDVELHGCFGTS*GDIFSLNWTPS
Trigger: GCTTGGAGTCCAGTTCAGGCTGAAGATGTCTCCTCAGCTGGTCCCAAAGCACCCATGAAGTTCTACATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464631.6
CDS TCA 72 bp CAAGACAGTGAGGTAACCTTGCCCAAAGTTACAGGGTaGGCTACGGATGAGCCAGGATGCAAGACTAAGCAG +
Preference number: 6 (lower is better)
Translates to: QDSEVTLPKVTG*ATDEPGCKTKQ
Trigger: CTGCTTAGTCTTGCATCCTGGCTCATCCGTAGCTCACCCTGTAACTTTGGGCAAGGTTACCTCACTGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441371.1
CDS CAA 72 bp CTGGAGCTGAGACCAGACTCACGCTGCTGGAGAAGGTaGGACTCACTAGCCAATGATGGCTTATTTTTCTGG +
Preference number: 6 (lower is better)
Translates to: LELRPDSRCWRR*DSLANDGLFFW
Trigger: CCAGAAAAATAAGCCATCATTGGCTAGTGAGTCCAACCTTCTCCAGCAGCGTGAGTCTGGTCTCAGCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS GCA 72 bp TGGAGACTGGGGCCCTTGCCTTCAAACGCATTCCATTaGAACATTCACAGTCCTTTCCTGCCTCCAAATCAA +
Preference number: 6 (lower is better)
Translates to: WRLGPLPSNAFH*NIHSPFLPPNQ
Trigger: TTGATTTGGAGGCAGGAAAGGACTGTGAATGTTGCAATGGAATGCGTTTGAAGGCAAGGGCCCCAGTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441371.1
CDS CCA 72 bp TGTGAAACTCACACACTAATGCCACAGCACCACCACTaGATGTCAGCATACCAAATTGAAGGAGCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: CETHTLMPQHHH*MSAYQIEGAAA
Trigger: GGCTGCTGCTCCTTCAATTTGGTATGCTGACATCCAGTGGTGGTGCTGTGGCATTAGTGTGTGAGTTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441371.1
CDS CCA 72 bp ACATTCAGTAGGACACTAATGCCACAGCACCACCACTaGATGTCAGCATACCAAATTGAAGGAGCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: TFSRTLMPQHHH*MSAYQIEGAAA
Trigger: GGCTGCTGCTCCTTCAATTTGGTATGCTGACATCCAGTGGTGGTGCTGTGGCATTAGTGTCCTACTGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495165.5
CDS CCA 72 bp GCGGAGGAGGAAGAAGAGGGGTTGGTCTTACTGTCTTaGACAGGCAGAGGCAGAATAAAATCCAAGTATAAG +
Preference number: 6 (lower is better)
Translates to: AEEEEEGLVLLS*TGRGRIKSKYK
Trigger: CTTATACTTGGATTTTATTCTGCCTCTGCCTGTCCAAGACAGTAAGACCAACCCCTCTTCTTCCTCCTCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441371.1
CDS CAA 72 bp AGTGGGACTTTATGGAGTCTTCGTAGTATCAGCCACTaGGAAGATGCTTCATGGAGAGGCTGTCTTCTGCGT +
Preference number: 6 (lower is better)
Translates to: SGTLWSLRSISH*EDASWRGCLLR
Trigger: ACGCAGAAGACAGCCTCTCCATGAAGCATCTTCCAAGTGGCTGATACTACGAAGACTCCATAAAGTCCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441371.1
CDS CAA 72 bp CCTCCCTCTCACTCCAGTGACCCTCTGAACATCAATTaGCAAAGGCCTGAGGTAGAAAGGGAGGTATTAACA +
Preference number: 6 (lower is better)
Translates to: PPSHSSDPLNIN*QRPEVEREVLT
Trigger: TGTTAATACCTCCCTTTCTACCTCAGGCCTTTGCAAATTGATGTTCAGAGGGTCACTGGAGTGAGAGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495165.5
CDS CAA 90 bp GTGCTGGTAAGTGGGACTTTATGGAGTCTTCGTAGTATCAGCCACTaGGAAGATGCTTCATGGAGAGGCTGTCTTCTGCGTAATCTTCTC +
Preference number: 6 (lower is better)
Translates to: VLVSGTLWSLRSISH*EDASWRGCLLRNLL
Trigger: GAGAAGATTACGCAGAAGACAGCCTCTCCATGAAGCATCTTCCAAGTGGCTGATACTACGAAGACTCCATAAAGTCCCACTTACCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441371.1
CDS CCA 72 bp AGTCTTCGTAGTATCAGCCACTTGGAAGATGCTTCATaGAGAGGCTGTCTTCTGCGTAATCTTCTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: SLRSISHLEDAS*RGCLLRNLLLA
Trigger: TGCCAAGAGAAGATTACGCAGAAGACAGCCTCTCCATGAAGCATCTTCCAAGTGGCTGATACTACGAAGACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441371.1
CDS CCA 72 bp GATCTGTTCCATCCTGTGCTGGTAAGTGGGACTTTATaGAGTCTTCGTAGTATCAGCCACTTGGAAGATGCT +
Preference number: 6 (lower is better)
Translates to: DLFHPVLVSGTL*SLRSISHLEDA
Trigger: AGCATCTTCCAAGTGGCTGATACTACGAAGACTCCATAAAGTCCCACTTACCAGCACAGGATGGAACAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441371.1
CDS CAA 72 bp GCTTCATGGAGAGGCTGTCTTCTGCGTAATCTTCTCTaGGCAATAAAGAGTAATTGCGAGGAAGGGGAAGTG +
Preference number: 6 (lower is better)
Translates to: ASWRGCLLRNLL*AIKSNCEEGEV
Trigger: CACTTCCCCTTCCTCGCAATTACTCTTTATTGCCAAGAGAAGATTACGCAGAAGACAGCCTCTCCATGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441371.1
CDS CAA 90 bp GTTGTGCAGTTATTTTATCTTCATCGATTGCCCCTAAATCAGGAGTaGCTGCTGCTGCTTCTGCTATATCCCATCATGACAGCCTGCTGT +
Preference number: 6 (lower is better)
Translates to: VVQLFYLHRLPLNQE*LLLLLLYPIMTACC
Trigger: ACAGCAGGCTGTCATGATGGGATATAGCAGAAGCAGCAGCAGCAACTCCTGATTTAGGGGCAATCGATGAAGATAAAATAACTGCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS CAA 72 bp CCAAGTATAAGTGGACCCACACAGTTCAAACTCATTTaGTTCAAGGGCCAACTGTACCTAGCATATACCAGG +
Preference number: 6 (lower is better)
Translates to: PSISGPTQFKLI*FKGQLYLAYTR
Trigger: CCTGGTATATGCTAGGTACAGTTGGCCCTTGAACAAAATGAGTTTGAACTGTGTGGGTCCACTTATACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441371.1
CDS CAA 90 bp GGTGTCCATGATAGTAATAACTTCCATAAGCATATTCCTCCCTCATaGTGGGAGACTGATAGCTCTGATATGAATTCTCATAACCTGGCC +
Preference number: 6 (lower is better)
Translates to: GVHDSNNFHKHIPPS*WETDSSDMNSHNLA
Trigger: GGCCAGGTTATGAGAATTCATATCAGAGCTATCAGTCTCCCACAATGAGGGAGGAATATGCTTATGGAAGTTATTACTATCATGGACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS CAA 90 bp AAATGGACTGTGCTGGTTTTCATAATGATGTTCATCAAGGTACTTTaGCTCTCGGTAATCTTCGTGCCAGATATAAGGACTCCGTTGCCT +
Preference number: 6 (lower is better)
Translates to: KWTVLVFIMMFIKVL*LSVIFVPDIRTPLP
Trigger: AGGCAACGGAGTCCTTATATCTGGCACGAAGATTACCGAGAGCAAAAGTACCTTGATGAACATCATTATGAAAACCAGCACAGTCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS TCA 72 bp CAGTTGAGCTTTGAACAATGTGGACATGATGGGCACTaGGCCCTGCAAAGTCAAAAATCCACATATGATTTT +
Preference number: 6 (lower is better)
Translates to: QLSFEQCGHDGH*ALQSQKSTYDF
Trigger: AAAATCATATGTGGATTTTTGACTTTGCAGGGCTCAGTGCCCATCATGTCCACATTGTTCAAAGCTCAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495165.5
CDS CAA 72 bp TTATTTTATCTTCATCGATTGCCCCTAAATCAGGAGTaGCTGCTGCTGCTTCTGCTATATCCCATCATGACA +
Preference number: 6 (lower is better)
Translates to: LFYLHRLPLNQE*LLLLLLYPIMT
Trigger: TGTCATGATGGGATATAGCAGAAGCAGCAGCAGCAACTCCTGATTTAGGGGCAATCGATGAAGATAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528461.5
CDS GCA 72 bp AATCTTCACAGGAACCCTATGAAGTCTAGTTCCTACTaGCACTTTAAGAATAAGAAAATCAAGCCAAGTGGC +
Preference number: 6 (lower is better)
Translates to: NLHRNPMKSSSY*HFKNKKIKPSG
Trigger: GCCACTTGGCTTGATTTTCTTATTCTTAAAGTGGCAGTAGGAACTAGACTTCATAGGGTTCCTGTGAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327037.8
CDS CCA 72 bp GCCCAAAGTTCCATCCTTGACTCTCTGAATTTGTCCTaGGTTTTGAGTAAGTTGTGCAGTTATTTTATCTTC +
Preference number: 6 (lower is better)
Translates to: AQSSILDSLNLS*VLSKLCSYFIF
Trigger: GAAGATAAAATAACTGCACAACTTACTCAAAACCCAGGACAAATTCAGAGAGTCAAGGATGGAACTTTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS CAA 72 bp GTGCTGGTTTTCATAATGATGTTCATCAAGGTACTTTaGCTCTCGGTAATCTTCGTGCCAGATATAAGGACT +
Preference number: 6 (lower is better)
Translates to: VLVFIMMFIKVL*LSVIFVPDIRT
Trigger: AGTCCTTATATCTGGCACGAAGATTACCGAGAGCAAAAGTACCTTGATGAACATCATTATGAAAACCAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS TCA 72 bp TTCACACACATCCTCTTAATCTTCACAGGAACCCTATaGAGTCTAGTTCCTACTGCCACTTTAAGAATAAGA +
Preference number: 6 (lower is better)
Translates to: FTHILLIFTGTL*SLVPTATLRIR
Trigger: TCTTATTCTTAAAGTGGCAGTAGGAACTAGACTTCATAGGGTTCCTGTGAAGATTAAGAGGATGTGTGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327037.8
CDS GCA 72 bp TTTAGGAACCGTTTTCCATCATTTATTATACTGATGTaGCATCCATCTGCATCATTAGGTTCAGTAGTTACC +
Preference number: 6 (lower is better)
Translates to: FRNRFPSFIILM*HPSASLGSVVT
Trigger: GGTAACTACTGAACCTAATGATGCAGATGGATGGCACATCAGTATAATAAATGATGGAAAACGGTTCCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495165.5
CDS CAA 72 bp GATAGTAATAACTTCCATAAGCATATTCCTCCCTCATaGTGGGAGACTGATAGCTCTGATATGAATTCTCAT +
Preference number: 6 (lower is better)
Translates to: DSNNFHKHIPPS*WETDSSDMNSH
Trigger: ATGAGAATTCATATCAGAGCTATCAGTCTCCCACAATGAGGGAGGAATATGCTTATGGAAGTTATTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308284.10
ENST00000464631.6
ENST00000528461.5
CDS GCA 72 bp TTTTCCATCATTTATTATACTGATGTGCCATCCATCTaGATCATTAGGTTCAGTAGTTACCATGACAATATG +
Preference number: 6 (lower is better)
Translates to: FSIIYYTDVPSI*IIRFSSYHDNM
Trigger: CATATTGTCATGGTAACTACTGAACCTAATGATGCAGATGGATGGCACATCAGTATAATAAATGATGGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495165.5