RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC16A (Homo sapiens)

Ensembl gene IDs: ENSG00000148396

Ensembl transcript IDs: ENST00000277537.10, ENST00000290037.10, ENST00000313050.11, ENST00000313084.9, ENST00000371706.7, ENST00000431893.3, ENST00000453963.5, ENST00000467838.2, ENST00000472305.1

Found 1874 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGGACTCACTGGGCAGTGACTCACAGCTGGGCTTGGAGAGGCCCTaGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCC +
Preference number: 1 (lower is better)
Translates to: RDSLGSDSQLGLERP*LLPTMWLSCGRDSS
Trigger: GGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR GCA 90 bp CTCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTaGAGAGCAGGGGTTGGGGTCTGCCTCAGTCACCCTCTCTTTGCT +
Preference number: 1 (lower is better)
Translates to: LHSFSQVQTRRGPRW*RAGVGVCLSHPLFA
Trigger: AGCAAAGAGAGGGTGACTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CCA 90 bp TCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTaGGTACACAAAATCACCCATGGTCCTCATCAGGCCACAGAAAGT +
Preference number: 1 (lower is better)
Translates to: SFPVTGPHGGQSPAL*VHKITHGPHQATES
Trigger: ACTTTCTGTGGCCTGATGAGGACCATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CCA 90 bp ATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTaGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCAGGAAGGAT +
Preference number: 1 (lower is better)
Translates to: IQRDTPVEHFGKHPG*SGLNDQVKQKARKD
Trigger: ATCCTTCCTGGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR TCA 90 bp CCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATaGAGCCCAAATCAAACATCACACGGTCAGTTTTCAACCTGGATG +
Preference number: 1 (lower is better)
Translates to: PASLTVSLTVLLHTK*SPNQTSHGQFSTWM
Trigger: CATCCAGGTTGAAAACTGACCGTGTGATGTTTGATTTGGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR GCA 90 bp AAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTaGATCAGTGAGAGGAGGCCCGTCTCTGAGTTGAACAGGGTTGAG +
Preference number: 1 (lower is better)
Translates to: KNTKSFRTVREALKL*ISERRPVSELNRVE
Trigger: CTCAACCCTGTTCAACTCAGAGACGGGCCTCCTCTCACTGATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR TCA 90 bp TACACAAAATCACCCATGGTCCTCATCAGGCCACAGAAAGTAAAGTaGGGCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGT +
Preference number: 1 (lower is better)
Translates to: YTKSPMVLIRPQKVK*GWKRLCNRKEIHCS
Trigger: ACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGCCTCACTTTACTTTCTGTGGCCTGATGAGGACCATGGGTGATTTTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR TCA 90 bp GCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTGGGCTAAATaGTCAAGTGAAACAGAAAGCCAGGAAGGATCTGTGCTAATTCCA +
Preference number: 1 (lower is better)
Translates to: ACGTFWKTSWVVWAK*SSETESQEGSVLIP
Trigger: TGGAATTAGCACAGATCCTTCCTGGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAAATGTTCCACAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGGGGCTCCTTCCCAGTaGCTGGGCCACACGGTGGGC +
Preference number: 2 (lower is better)
Translates to: EVPGFTRADRGTERAAPSGAPSQ*LGHTVG
Trigger: GCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCCC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGGGGCTCCTTCCCAGTaGCTGGGCCACACGGTGGGC +
Preference number: 2 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVGAPSQ*LGHTVG
Trigger: GCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCCC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGTGCAGAGCAGGGGTTaGGGTCTGCCTCAGTCACCC +
Preference number: 2 (lower is better)
Translates to: GLLPSDWATRWAVPSALGVQSRG*GLPQSP
Trigger: GGGTGACTGAGGCAGACCCCAACCCCTGCTCTGCAC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAACTGCTGTGTCTCCCTaGGGGCGGGACGGAGATCGC +
Preference number: 2 (lower is better)
Translates to: LLPSDWATRWAVPSALGTTAVSP*GRDGDR
Trigger: GCGATCTCCGTCCCGCCCCCAGGGAGACACAGCAGT...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGGCGAGGGCCCAGATaGTGCAGAGCAGGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGRRGPR*CRAGVG
Trigger: CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCGGCGAGGGCCCAGATaGTGCAGAGCAGGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVRRGPR*CRAGVG
Trigger: CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCG...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTGACTGGGCCACACGGTaGGCAGTCCCCAGCGCTTTG +
Preference number: 2 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGDWATR*AVPSAL
Trigger: CAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTC...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACTCGGAGGCGCTGATTaGGAACACAGCGCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATLGGAD*EHSALH
Trigger: GTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCTCGGAGGCGCTGATTaGGAACACAGCGCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLLGGAD*EHSALH
Trigger: GTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAAGTGCTACCAACCTCTaGACCAACGTCCCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: EVPGFTRADRGTERAAPSSATNL*TNVPQG
Trigger: CCCCTGGGGGACGTTGGTTCAGAGGTTGGTAGCACT...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGCCAGCTCTGAGTCACTaGTGTGTCTCCCTGGGGGCG +
Preference number: 2 (lower is better)
Translates to: GSSEALIENTAPSTHSARPALSH*CVSLGA
Trigger: CGCCCCCAGGGAGACACAGCAGTGACTCAGAGCTGG...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAAAGCGCGGGACTCACTaGGCAGTGACTCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: LLPSDWATRWAVPSALGTKRGTH*AVTHSW
Trigger: CCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTT...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCAAGCGCGGGACTCACTaGGCAGTGACTCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSKRGTH*AVTHSW
Trigger: CCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTT...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAAGCGCGGGACTCACTaGGCAGTGACTCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTKRGTH*AVTHSW
Trigger: CCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTT...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCTCCTTCCCAGTGACTaGGCCACACGGTGGGCAGTC +
Preference number: 2 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADLLPSD*ATRWAV
Trigger: GACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACGTGTGCGACCAGCTCTaGGTCACTGCTGTGTCTCCC +
Preference number: 2 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADVCDQL*VTAVSP
Trigger: GGGAGACACAGCAGTGACTCAGAGCTGGTCGCACAC...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGTGTGCGACCAGCTCTaGGTCACTGCTGTGTCTCCC +
Preference number: 2 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLVCDQL*VTAVSP
Trigger: GGGAGACACAGCAGTGACTCAGAGCTGGTCGCACAC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCATTACGATGGGCGGTaGGGAGGGAGGCACAGTGTG +
Preference number: 2 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGHYDGR*GGRHSV
Trigger: CACACTGTGCCTCCCTCCTCACCGCCCATCGTAATG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGGACTCACTGGGCAGTaGCTCACAGCTGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGGLTGQ*LTAGLG
Trigger: TCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGGACTCACTGGGCAGTaGCTCACAGCTGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLGLTGQ*LTAGLG
Trigger: TCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACGGACTCACTGGGCAGTaGCTCACAGCTGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADGLTGQ*LTAGLG
Trigger: TCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCC...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACATGTGGCTCTCCTGTaGCAGAGACAGCTCCGGCTT +
Preference number: 2 (lower is better)
Translates to: LLPSDWATRWAVPSALGTHVALL*QRQLRL
Trigger: AAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATG...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGCATGTGGCTCTCCTGTaGCAGAGACAGCTCCGGCTT +
Preference number: 2 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQHVALL*QRQLRL
Trigger: AAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATG...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCGGCTTGGAGAGGCCCTaGTTACTACCGACCATGTGG +
Preference number: 2 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAGLERP*LLPTMW
Trigger: CCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCC...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGCAGTGACTCACAGCTaGGCTTGGAGAGGCCCTGGT +
Preference number: 2 (lower is better)
Translates to: GSSEALIENTAPSTHSARAVTHS*AWRGPG
Trigger: ACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTGCAGTGACTCACAGCTaGGCTTGGAGAGGCCCTGGT +
Preference number: 2 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGAVTHS*AWRGPG
Trigger: ACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGC...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGGCCCGTCTCTGAGTTaGACAGGGTTGAGTCCACCA +
Preference number: 2 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVGPSLS*TGLSPP
Trigger: TGGTGGACTCAACCCTGTTCAACTCAGAGACGGGCC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAGCAGGGGTTGGGGTCTaGCTCAGTCACCCTCTCTTT +
Preference number: 2 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATAGVGV*LSHPLF
Trigger: AAAGAGAGGGTGACTGAGGCAGACCCCAACCCCTGC...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTGCAGGGGTTGGGGTCTaGCTCAGTCACCCTCTCTTT +
Preference number: 2 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGAGVGV*LSHPLF
Trigger: AAAGAGAGGGTGACTGAGGCAGACCCCAACCCCTGC...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGCAGGGGTTGGGGTCTaGCTCAGTCACCCTCTCTTT +
Preference number: 2 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVAGVGV*LSHPLF
Trigger: AAAGAGAGGGTGACTGAGGCAGACCCCAACCCCTGC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCATGTGGCTCTCCTGTaGCAGAGACAGCTCCGGCTT +
Preference number: 2 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGHVALL*QRQLRL
Trigger: AAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGGCTTGGAGAGGCCCTaGTTACTACCGACCATGTGG +
Preference number: 2 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGGLERP*LLPTMW
Trigger: CCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CAA 90 bp TTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCTaGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGC +
Preference number: 2 (lower is better)
Translates to: LKEARDSLGSDSQLG*ERPWLLPTMWLSCG
Trigger: GCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCATTACGATGGGCGGTaGGGAGGGAGGCACAGTGTG +
Preference number: 2 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAHYDGR*GGRHSV
Trigger: CACACTGTGCCTCCCTCCTCACCGCCCATCGTAATG...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGACTCACTGGGCAGTaGCTCACAGCTGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: STHSARFKHGEGPDGAEQGLTGQ*LTAGLG
Trigger: TCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACTCGGAGGCGCTGATTaGGAACACAGCGCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: APAWRKLLESKVVAVDPRLGGAD*EHSALH
Trigger: GTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACCAGCTCTGAGTCACTaGTGTGTCTCCCTGGGGGCG +
Preference number: 2 (lower is better)
Translates to: APAWRKLLESKVVAVDPRPALSH*CVSLGA
Trigger: CGCCCCCAGGGAGACACAGCAGTGACTCAGAGCTGG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTAATAATTCATTACGATaGGCGGTGAGGAGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: GLLPSDWATRWAVPSALGNNSLR*AVRREA
Trigger: TGCCTCCCTCCTCACCGCCCATCGTAATGAATTATT...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGACTGGGCCACACGGTaGGCAGTCCCCAGCGCTTTG +
Preference number: 2 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEDWATR*AVPSAL
Trigger: CAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CAA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTaGGGTACACAAAATCACCCATGGTCCTCATCAGGCCACAGAAAG +
Preference number: 2 (lower is better)
Translates to: LLPSDWATRWAVPSA*GTQNHPWSSSGHRK
Trigger: CTTTCTGTGGCCTGATGAGGACCATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCCACAGAAAGTAAAGTaGGGCTGGAAGCGTCTTTGC +
Preference number: 2 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSPQKVK*GWKRLC
Trigger: GCAAAGACGCTTCCAGCCTCACTTTACTTTCTGTGG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCAGCTCTGAGTCACTaGTGTGTCTCCCTGGGGGCG +
Preference number: 2 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEPALSH*CVSLGA
Trigger: CGCCCCCAGGGAGACACAGCAGTGACTCAGAGCTGG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCAGTCACCCTCTCTTTaGTCCCAGCACCTTAAAGGA +
Preference number: 2 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSQSPSL*SQHLKG
Trigger: TCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGACTG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGGAAGCCTTAAAGCTTTaGATCAGTGAGAGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTEALKL*ISERRP
Trigger: GGGCCTCCTCTCACTGATGCAAAGCTTTAAGGCTTC...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATCATGTGGCTCTCCTGTaGCAGAGACAGCTCCGGCTT +
Preference number: 2 (lower is better)
Translates to: TGPHGGQSPALWVHKITHHVALL*QRQLRL
Trigger: AAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATG...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGTTACTACCGACCATGTaGCTCTCCTGTGGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: GSSEALIENTAPSTHSARLLPTM*LSCGRD
Trigger: GTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAA...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGGCTTGGAGAGGCCCTaGTTACTACCGACCATGTGG +
Preference number: 2 (lower is better)
Translates to: TGPHGGQSPALWVHKITHGLERP*LLPTMW
Trigger: CCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGCGGCGAGGGCCCAGATaGTGCAGAGCAGGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWRRGPR*CRAGVG
Trigger: CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCG...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCAGTCCCCAGCGCTTTaGGTACACAAAATCACCCAT +
Preference number: 2 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSQSPAL*VHKITH
Trigger: ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGGGTCAGTTTTCAACCTaGATGACCACCCTGAGCCAT +
Preference number: 2 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTGQFST*MTTLSH
Trigger: ATGGCTCAGGGTGGTCATCCAGGTTGAAAACTGACC...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCCCCAGGGGAGAAAGTaGGTCATGTGGATTGTACCA +
Preference number: 2 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADPQGRK*VMWIVP
Trigger: TGGTACAATCCACATGACCCACTTTCTCCCCTGGGG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACCACAGAAAGTAAAGTaGGGCTGGAAGCGTCTTTGC +
Preference number: 2 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATPQKVK*GWKRLC
Trigger: GCAAAGACGCTTCCAGCCTCACTTTACTTTCTGTGG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGAGTGCTACCAACCTCTaGACCAACGTCCCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAESATNL*TNVPQG
Trigger: CCCCTGGGGGACGTTGGTTCAGAGGTTGGTAGCACT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGGATACTCTCCCCAAGTaGTACCAACCTCTGAACCAA +
Preference number: 2 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTDTLPK*YQPLNQ
Trigger: TTGGTTCAGAGGTTGGTAGCACTTGGGGAGAGTATC...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGAAGCCTTAAAGCTTTaGATCAGTGAGAGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLEALKL*ISERRP
Trigger: GGGCCTCCTCTCACTGATGCAAAGCTTTAAGGCTTC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAATAATTCATTACGATaGGCGGTGAGGAGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTNNSLR*AVRREA
Trigger: TGCCTCCCTCCTCACCGCCCATCGTAATGAATTATT...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCCGGCGAGGGCCCAGATaGTGCAGAGCAGGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPRRGPR*CRAGVG
Trigger: CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCG...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGAGACAGCCGGCTCTCTaGGGCTCCTTCCCAGTGACT +
Preference number: 2 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAERQPAL*GSFPVT
Trigger: AGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGGTCAGTTTTCAACCTaGATGACCACCCTGAGCCAT +
Preference number: 2 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLGQFST*MTTLSH
Trigger: ATGGCTCAGGGTGGTCATCCAGGTTGAAAACTGACC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCACTCAAAGTCTCAGTGTaGCAAAACTCGGGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: EVPGFTRADRGTERAAPSLKVSV*QNSGQK
Trigger: TTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAG...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCGCCTGTGGAACATTTTaGAAAACATCCTGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSACGTF*KTSWVV
Trigger: GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGC...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAAGCGGGACACGCCTGTaGAACATTTTGGAAAACATC +
Preference number: 2 (lower is better)
Translates to: EVPGFTRADRGTERAAPSSGTRL*NILENI
Trigger: GATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCT...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATCATTACGATGGGCGGTaGGGAGGGAGGCACAGTGTG +
Preference number: 2 (lower is better)
Translates to: YYRPCGSPVAETAPASMNHYDGR*GGRHSV
Trigger: CACACTGTGCCTCCCTCCTCACCGCCCATCGTAATG...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACTCTCTCAAAAACCGTaGACTAATGCCGAAGGAACC +
Preference number: 2 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATLSQKP*TNAEGT
Trigger: GGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCTCTCTCAAAAACCGTaGACTAATGCCGAAGGAACC +
Preference number: 2 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGLSQKP*TNAEGT
Trigger: GGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACTGGCCTTTCTCCAAGTaGCAAGGACAAATGGATCCA +
Preference number: 2 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADWPFSK*QGQMDP
Trigger: TGGATCCATTTGTCCTTGTCACTTGGAGAAAGGCCA...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCACTGCTGTGTCTCCCTaGGGGCGGGACGGAGATCGC +
Preference number: 2 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPTAVSP*GRDGDR
Trigger: GCGATCTCCGTCCCGCCCCCAGGGAGACACAGCAGT...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCAATAATTCATTACGATaGGCGGTGAGGAGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGNNSLR*AVRREA
Trigger: TGCCTCCCTCCTCACCGCCCATCGTAATGAATTATT...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTTACTACCGACCATGTaGCTCTCCTGTGGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQLLPTM*LSCGRD
Trigger: GTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAA...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGCAGAGCAGGGGTTaGGGTCTGCCTCAGTCACCC +
Preference number: 2 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWVQSRG*GLPQSP
Trigger: GGGTGACTGAGGCAGACCCCAACCCCTGCTCTGCAC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCGGCGAGGGCCCAGATaGTGCAGAGCAGGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: ELLSRNCVKILSPSATNLRRGPR*CRAGVG
Trigger: CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGACTGGGCCACACGGTaGGCAGTCCCCAGCGCTTTG +
Preference number: 2 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPDWATR*AVPSAL
Trigger: CAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCTCAAAGTCTCAGTGTaGCAAAACTCGGGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGLKVSV*QNSGQK
Trigger: TTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCTCAAAGTCTCAGTGTaGCAAAACTCGGGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLLKVSV*QNSGQK
Trigger: TTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGAGCGGGACACGCCTGTaGAACATTTTGGAAAACATC +
Preference number: 2 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLSGTRL*NILENI
Trigger: GATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCT...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGTGCGACCAGCTCTaGGTCACTGCTGTGTCTCCC +
Preference number: 2 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWVCDQL*VTAVSP
Trigger: GGGAGACACAGCAGTGACTCAGAGCTGGTCGCACAC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGCTCCTCGGAGGCGCTaGTTGAGAACACAGCGCCCT +
Preference number: 2 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPAPRRR*LRTQRP
Trigger: AGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCGGCCCGTCTCTGAGTTaGACAGGGTTGAGTCCACCA +
Preference number: 2 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVGPSLS*TGLSPP
Trigger: TGGTGGACTCAACCCTGTTCAACTCAGAGACGGGCC...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGCAGTCACCCTCTCTTTaGTCCCAGCACCTTAAAGGA +
Preference number: 2 (lower is better)
Translates to: STHSARFKHGEGPDGAEQQSPSL*SQHLKG
Trigger: TCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGACTG...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGGCTGGAAGCGTCTTTaGAACAGGAAAGAAATTCAC +
Preference number: 2 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLGWKRL*NRKEIH
Trigger: GTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGCC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCACTGCTGTGTCTCCCTaGGGGCGGGACGGAGATCGC +
Preference number: 2 (lower is better)
Translates to: ELLSRNCVKILSPSATNLTAVSP*GRDGDR
Trigger: GCGATCTCCGTCCCGCCCCCAGGGAGACACAGCAGT...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAACTGCTGTGTCTCCCTaGGGGCGGGACGGAGATCGC +
Preference number: 2 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQTAVSP*GRDGDR
Trigger: GCGATCTCCGTCCCGCCCCCAGGGAGACACAGCAGT...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGCAGTGACTCACAGCTaGGCTTGGAGAGGCCCTGGT +
Preference number: 2 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWAVTHS*AWRGPG
Trigger: ACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGAAGCGCGGGACTCACTaGGCAGTGACTCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWKRGTH*AVTHSW
Trigger: CCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTT...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGTGCAGAGCAGGGGTTaGGGTCTGCCTCAGTCACCC +
Preference number: 2 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPVQSRG*GLPQSP
Trigger: GGGTGACTGAGGCAGACCCCAACCCCTGCTCTGCAC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGGAAAACATCCTGGGTaGTCTGGGCTAAATGATCAA +
Preference number: 2 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVGKHPG*SGLNDQ
Trigger: TTGATCATTTAGCCCAGACCACCCAGGATGTTTTCC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAACTCGGAGGCGCTGATTaGGAACACAGCGCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQLGGAD*EHSALH
Trigger: GTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAG...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGCTCCTCGGAGGCGCTaGTTGAGAACACAGCGCCCT +
Preference number: 2 (lower is better)
Translates to: RSASSFLNSESNRAPTHEAPRRR*LRTQRP
Trigger: AGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGCTCCTCGGAGGCGCTaGTTGAGAACACAGCGCCCT +
Preference number: 2 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAAPRRR*LRTQRP
Trigger: AGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAGAAGCCTTAAAGCTTTaGATCAGTGAGAGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: APAWRKLLESKVVAVDPREALKL*ISERRP
Trigger: GGGCCTCCTCTCACTGATGCAAAGCTTTAAGGCTTC...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTGCAGAGCAGGGGTTaGGGTCTGCCTCAGTCACCC +
Preference number: 2 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAVQSRG*GLPQSP
Trigger: GGGTGACTGAGGCAGACCCCAACCCCTGCTCTGCAC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGTGCAGAGCAGGGGTTaGGGTCTGCCTCAGTCACCC +
Preference number: 2 (lower is better)
Translates to: RSASSFLNSESNRAPTHEVQSRG*GLPQSP
Trigger: GGGTGACTGAGGCAGACCCCAACCCCTGCTCTGCAC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACAGAAAGTGGGTCATGTaGATTGTACCACGAAAAGTG +
Preference number: 2 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADRKWVM*IVPRKV
Trigger: CACTTTTCGTGGTACAATCCACATGACCCACTTTCT...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGTGTGCGACCAGCTCTaGGTCACTGCTGTGTCTCCC +
Preference number: 2 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFVCDQL*VTAVSP
Trigger: GGGAGACACAGCAGTGACTCAGAGCTGGTCGCACAC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTCATTACGATGGGCGGTaGGGAGGGAGGCACAGTGTG +
Preference number: 2 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAHYDGR*GGRHSV
Trigger: CACACTGTGCCTCCCTCCTCACCGCCCATCGTAATG...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGTTTCCATCCAGAATCTaGAAGGATGGTGGAATTAAT +
Preference number: 2 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTFPSRI*KDGGIN
Trigger: ATTAATTCCACCATCCTTTCAGATTCTGGATGGAAA...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCCCAGCTCTGAGTCACTaGTGTGTCTCCCTGGGGGCG +
Preference number: 2 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSPALSH*CVSLGA
Trigger: CGCCCCCAGGGAGACACAGCAGTGACTCAGAGCTGG...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGGCTGGAAGCGTCTTTaGAACAGGAAAGAAATTCAC +
Preference number: 2 (lower is better)
Translates to: TGPHGGQSPALWVHKITHGWKRL*NRKEIH
Trigger: GTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGCC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTACTAAGTTCCAGAGCTaGTGTCAAGAAACTGTGTTA +
Preference number: 2 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGTKFQS*CQETVL
Trigger: TAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGT...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGAAGCCTTAAAGCTTTaGATCAGTGAGAGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEEALKL*ISERRP
Trigger: GGGCCTCCTCTCACTGATGCAAAGCTTTAAGGCTTC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCCATTACGATGGGCGGTaGGGAGGGAGGCACAGTGTG +
Preference number: 2 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSHYDGR*GGRHSV
Trigger: CACACTGTGCCTCCCTCCTCACCGCCCATCGTAATG...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCTTTCCATCCAGAATCTaGAAGGATGGTGGAATTAAT +
Preference number: 2 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGFPSRI*KDGGIN
Trigger: ATTAATTCCACCATCCTTTCAGATTCTGGATGGAAA...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTTTTCCATCCAGAATCTaGAAGGATGGTGGAATTAAT +
Preference number: 2 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGFPSRI*KDGGIN
Trigger: ATTAATTCCACCATCCTTTCAGATTCTGGATGGAAA...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACATTCGGCAAACAATTCTaGGTCAAAGATTCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATFGKQF*VKDSVF
Trigger: AAAGACTGAATCTTTGACTCAGAATTGTTTGCCGAA...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCCCACAGAAAGTAAAGTaGGGCTGGAAGCGTCTTTGC +
Preference number: 2 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVPQKVK*GWKRLC
Trigger: GCAAAGACGCTTCCAGCCTCACTTTACTTTCTGTGG...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGCAGGGGTTGGGGTCTaGCTCAGTCACCCTCTCTTT +
Preference number: 2 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFAGVGV*LSHPLF
Trigger: AAAGAGAGGGTGACTGAGGCAGACCCCAACCCCTGC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACATGTGGCTCTCCTGTaGCAGAGACAGCTCCGGCTT +
Preference number: 2 (lower is better)
Translates to: RSASSFLNSESNRAPTHEHVALL*QRQLRL
Trigger: AAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGTTACTACCGACCATGTaGCTCTCCTGTGGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWLLPTM*LSCGRD
Trigger: GTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAA...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGGCTTGGAGAGGCCCTaGTTACTACCGACCATGTGG +
Preference number: 2 (lower is better)
Translates to: RSASSFLNSESNRAPTHEGLERP*LLPTMW
Trigger: CCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAGGAAAACATCCTGGGTaGTCTGGGCTAAATGATCAA +
Preference number: 2 (lower is better)
Translates to: APAWRKLLESKVVAVDPRGKHPG*SGLNDQ
Trigger: TTGATCATTTAGCCCAGACCACCCAGGATGTTTTCC...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CAA 90 bp GAAGCCTTAAAGCTTTGCATCAGTGAGAGGAGGCCCGTCTCTGAGTaGAACAGGGTTGAGTCCACCAGGAGCTACTCAAAGTCTCAGTGT +
Preference number: 2 (lower is better)
Translates to: EALKLCISERRPVSE*NRVESTRSYSKSQC
Trigger: ACACTGAGACTTTGAGTAGCTCCTGGTGGACTCAACCCTGTTCAACTCAGAGACGGGCCTCCTCTCACTGATGCAAAGCTTTAAGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGCCACAGAAAGTAAAGTaGGGCTGGAAGCGTCTTTGC +
Preference number: 2 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWPQKVK*GWKRLC
Trigger: GCAAAGACGCTTCCAGCCTCACTTTACTTTCTGTGG...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCACTGCTGTGTCTCCCTaGGGGCGGGACGGAGATCGC +
Preference number: 2 (lower is better)
Translates to: DKNTKSFRTVREALKLCITAVSP*GRDGDR
Trigger: GCGATCTCCGTCCCGCCCCCAGGGAGACACAGCAGT...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCAATAATTCATTACGATaGGCGGTGAGGAGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVNNSLR*AVRREA
Trigger: TGCCTCCCTCCTCACCGCCCATCGTAATGAATTATT...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCTTACTACCGACCATGTaGCTCTCCTGTGGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPLLPTM*LSCGRD
Trigger: GTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAA...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAAGAAAGTGGGTCATGTaGATTGTACCACGAAAAGTG +
Preference number: 2 (lower is better)
Translates to: APAWRKLLESKVVAVDPRRKWVM*IVPRKV
Trigger: CACTTTTCGTGGTACAATCCACATGACCCACTTTCT...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTTTCGGCAAACAATTCTaGGTCAAAGATTCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAFGKQF*VKDSVF
Trigger: AAAGACTGAATCTTTGACTCAGAATTGTTTGCCGAA...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGCTCTCTCAAAAACCGTaGACTAATGCCGAAGGAACC +
Preference number: 2 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWLSQKP*TNAEGT
Trigger: GGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAG...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCAGCTCTGAGTCACTaGTGTGTCTCCCTGGGGGCG +
Preference number: 2 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSPALSH*CVSLGA
Trigger: CGCCCCCAGGGAGACACAGCAGTGACTCAGAGCTGG...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGAGAAAGTGGGTCATGTaGATTGTACCACGAAAAGTG +
Preference number: 2 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAERKWVM*IVPRKV
Trigger: CACTTTTCGTGGTACAATCCACATGACCCACTTTCT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAACCCCAGGGGAGAAAGTaGGTCATGTGGATTGTACCA +
Preference number: 2 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQPQGRK*VMWIVP
Trigger: TGGTACAATCCACATGACCCACTTTCTCCCCTGGGG...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGTGTGCGACCAGCTCTaGGTCACTGCTGTGTCTCCC +
Preference number: 2 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSVCDQL*VTAVSP
Trigger: GGGAGACACAGCAGTGACTCAGAGCTGGTCGCACAC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCATTACGATGGGCGGTaGGGAGGGAGGCACAGTGTG +
Preference number: 2 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSHYDGR*GGRHSV
Trigger: CACACTGTGCCTCCCTCCTCACCGCCCATCGTAATG...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGGACTCACTGGGCAGTaGCTCACAGCTGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSGLTGQ*LTAGLG
Trigger: TCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACAGTCACCCTCTCTTTaGTCCCAGCACCTTAAAGGA +
Preference number: 2 (lower is better)
Translates to: RSASSFLNSESNRAPTHEQSPSL*SQHLKG
Trigger: TCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGACTG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAACAGTCACCCTCTCTTTaGTCCCAGCACCTTAAAGGA +
Preference number: 2 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQQSPSL*SQHLKG
Trigger: TCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGACTG...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACAATAATTCATTACGATaGGCGGTGAGGAGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: AVTKASLKNRELMPKEPHNNSLR*AVRREA
Trigger: TGCCTCCCTCCTCACCGCCCATCGTAATGAATTATT...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCGCAGTGACTCACAGCTaGGCTTGGAGAGGCCCTGGT +
Preference number: 2 (lower is better)
Translates to: DKNTKSFRTVREALKLCIAVTHS*AWRGPG
Trigger: ACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGC...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACAGTCCCCAGCGCTTTaGGTACACAAAATCACCCAT +
Preference number: 2 (lower is better)
Translates to: RSASSFLNSESNRAPTHEQSPAL*VHKITH
Trigger: ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTAGACAGCCGGCTCTCTaGGGCTCCTTCCCAGTGACT +
Preference number: 2 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSRQPAL*GSFPVT
Trigger: AGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCT...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCCCCCAGGGGAGAAAGTaGGTCATGTGGATTGTACCA +
Preference number: 2 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSPQGRK*VMWIVP
Trigger: TGGTACAATCCACATGACCCACTTTCTCCCCTGGGG...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGCTCCTACACACGAAATaGAGCCCAAATCAAACATCA +
Preference number: 2 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWLLHTK*SPNQTS
Trigger: TGATGTTTGATTTGGGCTTCATTTCGTGTGTAGGAG...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCACTAAGTTCCAGAGCTaGTGTCAAGAAACTGTGTTA +
Preference number: 2 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVTKFQS*CQETVL
Trigger: TAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGT...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCGGCTTGGAGAGGCCCTaGTTACTACCGACCATGTGG +
Preference number: 2 (lower is better)
Translates to: DKNTKSFRTVREALKLCIGLERP*LLPTMW
Trigger: CCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCC...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCCAGTCCCCAGCGCTTTaGGTACACAAAATCACCCAT +
Preference number: 2 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSQSPAL*VHKITH
Trigger: ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTG...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGAGAAAGTGGGTCATGTaGATTGTACCACGAAAAGTG +
Preference number: 2 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWRKWVM*IVPRKV
Trigger: CACTTTTCGTGGTACAATCCACATGACCCACTTTCT...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTTTCCATCCAGAATCTaGAAGGATGGTGGAATTAAT +
Preference number: 2 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVFPSRI*KDGGIN
Trigger: ATTAATTCCACCATCCTTTCAGATTCTGGATGGAAA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATTTCGGCAAACAATTCTaGGTCAAAGATTCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: YYRPCGSPVAETAPASMNFGKQF*VKDSVF
Trigger: AAAGACTGAATCTTTGACTCAGAATTGTTTGCCGAA...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGGCTGGAAGCGTCTTTaGAACAGGAAAGAAATTCAC +
Preference number: 2 (lower is better)
Translates to: ELLSRNCVKILSPSATNLGWKRL*NRKEIH
Trigger: GTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGCC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGGCTGGAAGCGTCTTTaGAACAGGAAAGAAATTCAC +
Preference number: 2 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQGWKRL*NRKEIH
Trigger: GTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGCC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR GCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGAAGCCTTAAAGCTTTaGATCAGTGAGAGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAEALKL*ISERRP
Trigger: GGGCCTCCTCTCACTGATGCAAAGCTTTAAGGCTTC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCCAGTCCCCAGCGCTTTaGGTACACAAAATCACCCAT +
Preference number: 2 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAQSPAL*VHKITH
Trigger: ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTG...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGGTCAGTTTTCAACCTaGATGACCACCCTGAGCCAT +
Preference number: 2 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAGQFST*MTTLSH
Trigger: ATGGCTCAGGGTGGTCATCCAGGTTGAAAACTGACC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCTCCTACACACGAAATaGAGCCCAAATCAAACATCA +
Preference number: 2 (lower is better)
Translates to: ELLSRNCVKILSPSATNLLLHTK*SPNQTS
Trigger: TGATGTTTGATTTGGGCTTCATTTCGTGTGTAGGAG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCAATAATTCATTACGATaGGCGGTGAGGAGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKANNSLR*AVRREA
Trigger: TGCCTCCCTCCTCACCGCCCATCGTAATGAATTATT...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGGTCAGTTTTCAACCTaGATGACCACCCTGAGCCAT +
Preference number: 2 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSGQFST*MTTLSH
Trigger: ATGGCTCAGGGTGGTCATCCAGGTTGAAAACTGACC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAATTTCCATCCAGAATCTaGAAGGATGGTGGAATTAAT +
Preference number: 2 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQFPSRI*KDGGIN
Trigger: ATTAATTCCACCATCCTTTCAGATTCTGGATGGAAA...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAATTTCCATCCAGAATCTaGAAGGATGGTGGAATTAAT +
Preference number: 2 (lower is better)
Translates to: RSASSFLNSESNRAPTHEFPSRI*KDGGIN
Trigger: ATTAATTCCACCATCCTTTCAGATTCTGGATGGAAA...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAATTCGGCAAACAATTCTaGGTCAAAGATTCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQFGKQF*VKDSVF
Trigger: AAAGACTGAATCTTTGACTCAGAATTGTTTGCCGAA...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTTCGGCAAACAATTCTaGGTCAAAGATTCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSFGKQF*VKDSVF
Trigger: AAAGACTGAATCTTTGACTCAGAATTGTTTGCCGAA...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCAGAAAGTGGGTCATGTaGATTGTACCACGAAAAGTG +
Preference number: 2 (lower is better)
Translates to: DKNTKSFRTVREALKLCIRKWVM*IVPRKV
Trigger: CACTTTTCGTGGTACAATCCACATGACCCACTTTCT...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR TCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCTTCGGCAAACAATTCTaGGTCAAAGATTCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: DKNTKSFRTVREALKLCIFGKQF*VKDSVF
Trigger: AAAGACTGAATCTTTGACTCAGAATTGTTTGCCGAA...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR GCA 72 bp GGAGGGAGGCACAGTGTGCGACCAGCTCTGAGTCACTaGTGTGTCTCCCTGGGGGCGGGACGGAGATCGCGG +
Preference number: 3 (lower is better)
Translates to: GGRHSVRPALSH*CVSLGAGRRSR
Trigger: CCGCGATCTCCGTCCCGCCCCCAGGGAGACACAGCAGTGACTCAGAGCTGGTCGCACACTGTGCCTCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCGACTCACAGCTGGGCTaGGAGAGGCCCTGGTTACTA +
Preference number: 3 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSADSQLG*ERPWLL
Trigger: TAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTC...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR TCA 72 bp GCCGAAGGAACCCCACGGCTCCTCGGAGGCGCTGATTaGGAACACAGCGCCCTCCACTCATTCAGCCAGGTT +
Preference number: 3 (lower is better)
Translates to: AEGTPRLLGGAD*EHSALHSFSQV
Trigger: AACCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCCGTGGGGTTCCTTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CCA 72 bp CGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCTTaGAGAGGCCCTGGTTACTACCGACCATGTGGCTCT +
Preference number: 3 (lower is better)
Translates to: RGTHWAVTHSWA*RGPGYYRPCGS
Trigger: AGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAGACTCACAGCTGGGCTaGGAGAGGCCCTGGTTACTA +
Preference number: 3 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATDSQLG*ERPWLL
Trigger: TAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTC...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGACTCACAGCTGGGCTaGGAGAGGCCCTGGTTACTA +
Preference number: 3 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVDSQLG*ERPWLL
Trigger: TAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCGCAGTCCCCAGCGCTTaGGGTACACAAAATCACCCA +
Preference number: 3 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSAVPSA*GTQNHP
Trigger: TGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGC...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CCA 72 bp CTGGGCAGTGACTCACAGCTGGGCTTGGAGAGGCCCTaGTTACTACCGACCATGTGGCTCTCCTGTGGCAGA +
Preference number: 3 (lower is better)
Translates to: LGSDSQLGLERP*LLPTMWLSCGR
Trigger: TCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CCA 72 bp AGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTaGGCTTGGAGAGGCCCTGGTTACTACCGACCATGT +
Preference number: 3 (lower is better)
Translates to: RKRGTHWAVTHS*AWRGPGYYRPC
Trigger: ACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CCA 72 bp TCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATaGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGTCAC +
Preference number: 3 (lower is better)
Translates to: SFSQVQTRRGPR*CRAGVGVCLSH
Trigger: GTGACTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CCA 72 bp GTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTaGGTACACAAAATCACCCATGGTCCTCATCAGGCC +
Preference number: 3 (lower is better)
Translates to: VTGPHGGQSPAL*VHKITHGPHQA
Trigger: GGCCTGATGAGGACCATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CCA 72 bp CTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTaGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACC +
Preference number: 3 (lower is better)
Translates to: LPPGGSFLNQKS*QSTPEQRAEPT
Trigger: GGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTGCAGTCCCCAGCGCTTaGGGTACACAAAATCACCCA +
Preference number: 3 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGAVPSA*GTQNHP
Trigger: TGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGC...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGCAGTCCCCAGCGCTTaGGGTACACAAAATCACCCA +
Preference number: 3 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLAVPSA*GTQNHP
Trigger: TGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGACTCACAGCTGGGCTaGGAGAGGCCCTGGTTACTA +
Preference number: 3 (lower is better)
Translates to: STHSARFKHGEGPDGAEQDSQLG*ERPWLL
Trigger: TAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAAGGCCCGTCTCTGAGTaGAACAGGGTTGAGTCCACC +
Preference number: 3 (lower is better)
Translates to: APAWRKLLESKVVAVDPRRPVSE*NRVEST
Trigger: GGTGGACTCAACCCTGTTCAACTCAGAGACGGGCCT...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCAGTGGGTCATGTGGATaGTACCACGAAAAGTGCTCA +
Preference number: 3 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVSGSCG*YHEKCS
Trigger: TGAGCACTTTTCGTGGTACAATCCACATGACCCACT...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTAGTGGGTCATGTGGATaGTACCACGAAAAGTGCTCA +
Preference number: 3 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGSGSCG*YHEKCS
Trigger: TGAGCACTTTTCGTGGTACAATCCACATGACCCACT...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CCA 72 bp GTGACAAGGACAAATGGATCCAGCGGGACACGCCTGTaGAACATTTTGGAAAACATCCTGGGTGGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: VTRTNGSSGTRL*NILENILGGLG
Trigger: GCCCAGACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCCTTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTCAGTCTCTTTAGACTaGACAAGAATACGAAGAGTT +
Preference number: 3 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSSVSLD*TRIRRV
Trigger: AACTCTTCGTATTCTTGTCAAGTCTAAAGAGACTGA...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCGCCTGTGGAACATTTaGGAAAACATCCTGGGTGGT +
Preference number: 3 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAERLWNI*ENILGG
Trigger: ACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGACTCACAGCTGGGCTaGGAGAGGCCCTGGTTACTA +
Preference number: 3 (lower is better)
Translates to: QSLSVAKLGAEILSSRAADSQLG*ERPWLL
Trigger: TAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACTCAGTCTCTTTAGACTaGACAAGAATACGAAGAGTT +
Preference number: 3 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADSVSLD*TRIRRV
Trigger: AACTCTTCGTATTCTTGTCAAGTCTAAAGAGACTGA...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAAAAACACCAAACAGTTaGTATTCCTCCAGCAGAACC +
Preference number: 3 (lower is better)
Translates to: APAWRKLLESKVVAVDPRKTPNS*YSSSRT
Trigger: GGTTCTGCTGGAGGAATACAAACTGTTTGGTGTTTT...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCAGGCCCGTCTCTGAGTaGAACAGGGTTGAGTCCACC +
Preference number: 3 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKARPVSE*NRVEST
Trigger: GGTGGACTCAACCCTGTTCAACTCAGAGACGGGCCT...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCGCAGTCCCCAGCGCTTaGGGTACACAAAATCACCCA +
Preference number: 3 (lower is better)
Translates to: DKNTKSFRTVREALKLCIAVPSA*GTQNHP
Trigger: TGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGC...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCAGTGGGTCATGTGGATaGTACCACGAAAAGTGCTCA +
Preference number: 3 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSSGSCG*YHEKCS
Trigger: TGAGCACTTTTCGTGGTACAATCCACATGACCCACT...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR-3UTR CAA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTCAGTCTCTTTAGACTaGACAAGAATACGAAGAGTT +
Preference number: 3 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVSVSLD*TRIRRV
Trigger: AACTCTTCGTATTCTTGTCAAGTCTAAAGAGACTGA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR TCA 72 bp TCACCCATGGTCCTCATCAGGCCACAGAAAGTAAAGTaGGGCTGGAAGCGTCTTTGCAACAGGAAAGAAATT +
Preference number: 3 (lower is better)
Translates to: SPMVLIRPQKVK*GWKRLCNRKEI
Trigger: AATTTCTTTCCTGTTGCAAAGACGCTTCCAGCCTCACTTTACTTTCTGTGGCCTGATGAGGACCATGGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR GCA 72 bp GGAGAAAGTGGGTCATGTGGATTGTACCACGAAAAGTaGTCACGGAAAGTGCAGCCTTTTAGAGAAGTGCAT +
Preference number: 3 (lower is better)
Translates to: GESGSCGLYHEK*SRKVQPFREVH
Trigger: ATGCACTTCTCTAAAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CCA 72 bp GACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTaGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCC +
Preference number: 3 (lower is better)
Translates to: DTPVEHFGKHPG*SGLNDQVKQKA
Trigger: GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CCA 72 bp AACAATTCTCATTTAGGAAAAATAGCCGCTCCCGCCTaGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTC +
Preference number: 3 (lower is better)
Translates to: NNSHLGKIAAPA*RKLLESKVVAV
Trigger: GACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGCGGCTATTTTTCCTAAATGAGAATTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR TCA 72 bp ACATTTTGGAAAACATCCTGGGTGGTCTGGGCTAAATaGTCAAGTGAAACAGAAAGCCAGGAAGGATCTGTG +
Preference number: 3 (lower is better)
Translates to: TFWKTSWVVWAK*SSETESQEGSV
Trigger: CACAGATCCTTCCTGGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR TCA 72 bp TTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATaGAGCCCAAATCAAACATCACACGGTCAGTTTTCA +
Preference number: 3 (lower is better)
Translates to: LTVSLTVLLHTK*SPNQTSHGQFS
Trigger: TGAAAACTGACCGTGTGATGTTTGATTTGGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGCTACTCCGCCCAGCTaGGAAGCGCGGGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGATPPS*EARGPD
Trigger: GTCAGGGCCCCGCGCTTCTCAGCTGGGCGGAGTAGC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290037.10
CDS-3UTR TCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTTGGCCACGGCTGCTCTaGCGGCACAGCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGWPRLL*RHSCLA
Trigger: GGCCAGGCAGCTGTGCCGTCAGAGCAGCCGTGGCCA...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCCTGGGAGAAGGGCCTaGCAGAGGCTGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVPGRRA*QRLPAP
Trigger: GGGGGCAGGCAGCCTCTGCCAGGCCCTTCTCCCAGG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGGGGGCCTCCGAGTCTaGCACCGTCCTCGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGGGLRV*HRPRGG
Trigger: ACCCCCTCGAGGACGGTGCCAGACTCGGAGGCCCCC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGCCGGCTCGCTCCGCTaGGTCCCGCTTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGAGSLR*VPLGFR
Trigger: CCTGAACCCAAGCGGGACCCAGCGGAGCGAGCCGGC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGCTCGCTGTGGACGCTaGGCCGGTCCACCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGARCGR*AGPPLP
Trigger: GGGAAGAGGTGGACCGGCGCAGCGTCCACAGCGAGC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAGCTGGGAGGGCCCCCTaGAGCAGGGAGGTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTAGRAP*SREVAR
Trigger: CCTGGCGACCTCCCTGCTGCAGGGGGCCCTCCCAGC...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCCGCCAGCAGAGGGTTaGCGATCCCCAGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVPPAEG*RSPGLL
Trigger: CAGGAGCCCTGGGGATCGCCAACCCTCTGCTGGCGG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCGAGCTTGGGTTCCGTaGCTGCTGCCCGGACATCGC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVRAWVP*LLPGHR
Trigger: GCGATGTCCGGGCAGCAGTCACGGAACCCAAGCTCG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGGCCACGGCTGCTCTaGCGGCACAGCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSWPRLL*RHSCLA
Trigger: GGCCAGGCAGCTGTGCCGTCAGAGCAGCCGTGGCCA...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGGTGCGAGTGGGAGCTaGGGCTGCTGCGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGGASGS*GCCGGW
Trigger: CCAGCCGCCGCAGCAGCCTCAGCTCCCACTCGCACC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGGGAGGGCTCCATCCTaGTGCCATACTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGGRAPS*CHTPAP
Trigger: GGGGGCTGGAGTATGGCATCAGGATGGAGCCCTCCC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCAAGGGCGGTGCCCCTaGGTGCGGAAGCATGTGCAC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVQGRCP*VRKHVH
Trigger: GTGCACATGCTTCCGCACGCAGGGGCACCGCCCTTG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGGGGGAGAAGCCTGTTaGTGGGGTGGCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVGGEAC*WGGTSS
Trigger: GGAGCTGGTGCCACCCCAGCAACAGGCTTCTCCCCC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGGAGTGCCAGGACACTaGTGCGGGAGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVGVPGH*CGRAPS
Trigger: GGATGGAGCCCTCCCGCAGCAGTGTCCTGGCACTCC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGCTGGGAGGGCCCCCTaGAGCAGGGAGGTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVAGRAP*SREVAR
Trigger: CCTGGCGACCTCCCTGCTGCAGGGGGCCCTCCCAGC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGCTGGGAGGGCCCCCTaGAGCAGGGAGGTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGAGRAP*SREVAR
Trigger: CCTGGCGACCTCCCTGCTGCAGGGGGCCCTCCCAGC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGCTGGGAGGGCCCCCTaGAGCAGGGAGGTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLAGRAP*SREVAR
Trigger: CCTGGCGACCTCCCTGCTGCAGGGGGCCCTCCCAGC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCCTGGGAGAAGGGCCTaGCAGAGGCTGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSPGRRA*QRLPAP
Trigger: GGGGGCAGGCAGCCTCTGCCAGGCCCTTCTCCCAGG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGGCTGGCTCGGGAGCTaGGCCGCTCGGGCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVGWLGS*AARARD
Trigger: ATCCCGAGCCCGAGCGGCCCAGCTCCCGAGCCAGCC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCGCCGAGTGCTCGCTGTaGACGCTGCGCCGGTCCACC +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSAECSL*TLRRST
Trigger: GGTGGACCGGCGCAGCGTCCACAGCGAGCACTCGGC...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGGGCTGCTGCGGCGGCTaGCCAGGCTGTGTGCGCTGT +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQGCCGG*PGCVRC
Trigger: ACAGCGCACACAGCCTGGCCAGCCGCCGCAGCAGCC...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGCTCTCTCGAGCGAGCTaGCGGCAGCCGCCGGACCAC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQLSRAS*RQPPDH
Trigger: GTGGTCCGGCGGCTGCCGCCAGCTCGCTCGAGAGAG...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACTCTCTCGAGCGAGCTaGCGGCAGCCGCCGGACCAC +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTLSRAS*RQPPDH
Trigger: GTGGTCCGGCGGCTGCCGCCAGCTCGCTCGAGAGAG...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCGGGGGCAGTGGCACTaGGAACATCGGCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVRGQWH*EHRHSG
Trigger: GCCAGAGTGCCGATGTTCCCAGTGCCACTGCCCCCG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCGGGCCCCGGGGGCAGTaGCACTGGGAACATCGGCAC +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAGPRGQ*HWEHRH
Trigger: GTGCCGATGTTCCCAGTGCCACTGCCCCCGGGGCCC...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGGGCCCCGGGGGCAGTaGCACTGGGAACATCGGCAC +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSGPRGQ*HWEHRH
Trigger: GTGCCGATGTTCCCAGTGCCACTGCCCCCGGGGCCC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCGGGGGCCTCCGAGTCTaGCACCGTCCTCGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAGGLRV*HRPRGG
Trigger: ACCCCCTCGAGGACGGTGCCAGACTCGGAGGCCCCC...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTAGGGCATGGCCCCGCTaGGAGGGCCCCCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGRAWPR*EGPLQQ
Trigger: CTGCTGCAGGGGGCCCTCCCAGCGGGGCCATGCCCT...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGACTGGGCCACACGGTaGGCAGTCCCCAGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVDWATR*AVPSAL
Trigger: CAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGACTGGGCCACACGGTaGGCAGTCCCCAGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGDWATR*AVPSAL
Trigger: CAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCAGCCGGGGCCACTGCTaGAATTGCTGCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVSRGHC*NCCGRC
Trigger: GCACCTACCGCAGCAATTTCAGCAGTGGCCCCGGCT...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGGGGCTCCTTCCCAGTaGCTGGGCCACACGGTGGGC +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLGAPSQ*LGHTVG
Trigger: GCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCCC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCGAGGTGGCCCAGCCATaGCAGACGGGACCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSEVAQP*QTGPSG
Trigger: CCCAGACGGTCCCGTCTGGCATGGCTGGGCCACCTC...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGCGGGGGCTGGGCCTTaGAAGACAGGTGGACTGCTT +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVAGAGP*KTGGLL
Trigger: AAGCAGTCCACCTGTCTTGCAAGGCCCAGCCCCCGC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCAGGGTGAACGATGTTaGCCCGAGGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVQGERC*PEGCGP
Trigger: AGGCCCACAGCCCTCGGGGCAACATCGTTCACCCTG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACATGGGCCGGGGGCAAGTaGAGGCACTGGCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTWAGGK*RHWLWP
Trigger: TGGCCACAGCCAGTGCCTGCACTTGCCCCCGGCCCA...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCAGGCTCCGTGCCGAGTaGTCGCTGTGGACGCTGCGC +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSRLRAE*SLWTLR
Trigger: GCGCAGCGTCCACAGCGAGCACTCGGCACGGAGCCT...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCACGCTCGGGCTCGAGTaGTCAGGGCTCGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSTLGLE*SGLGAG
Trigger: GCCTGCACCGAGCCCTGAGCACTCGAGCCCGAGCGT...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGCAGGCGGGGCAGCTTaGACAGTCTTGGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGAGGAA*TVLGIE
Trigger: CTCGATGCCCAAGACTGTGCAAGCTGCCCCGCCTGC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGGTGGCGCAGGCCTGTaGCAGCTGAGCAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVGGAGL*QLSRVV
Trigger: TACAACCCTGCTCAGCTGGCACAGGCCTGCGCCACC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGCCGAGGATTCCCGGCTaGAGGTGGCCCAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTPRIPG*RWPSHA
Trigger: GGCATGGCTGGGCCACCTCCAGCCGGGAATCCTCGG...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTCAGCAGCCTCATTGCTaGGGCCTGGGAGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGQQPHC*GLGEGP
Trigger: AGGCCCTTCTCCCAGGCCCCAGCAATGAGGCTGCTG...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGGCCGTTCCGAGGAGTaGCTGGCTCGGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVGRSEE*LARELG
Trigger: GCCCAGCTCCCGAGCCAGCCACTCCTCGGAACGGCC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTGCCGAGTGCTCGCTGTaGACGCTGCGCCGGTCCACC +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGAECSL*TLRRST
Trigger: GGTGGACCGGCGCAGCGTCCACAGCGAGCACTCGGC...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAGCCGAGTGCTCGCTGTaGACGCTGCGCCGGTCCACC +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATAECSL*TLRRST
Trigger: GGTGGACCGGCGCAGCGTCCACAGCGAGCACTCGGC...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGGCTGCTGCGGCGGCTaGCCAGGCTGTGTGCGCTGT +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGGCCGG*PGCVRC
Trigger: ACAGCGCACACAGCCTGGCCAGCCGCCGCAGCAGCC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGGCTGCTGCGGCGGCTaGCCAGGCTGTGTGCGCTGT +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLGCCGG*PGCVRC
Trigger: ACAGCGCACACAGCCTGGCCAGCCGCCGCAGCAGCC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCTGCGGCACTATCCCTaGGTCTGGGCTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVLRHYP*VWAPGF
Trigger: GAAGCCAGGAGCCCAGACCCAGGGATAGTGCCGCAG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGGGGGCCTCCGAGTCTaGCACCGTCCTCGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGGGLRV*HRPRGG
Trigger: ACCCCCTCGAGGACGGTGCCAGACTCGGAGGCCCCC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
67% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGCCGGCTCGCTCCGCTaGGTCCCGCTTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGAGSLR*VPLGFR
Trigger: CCTGAACCCAAGCGGGACCCAGCGGAGCGAGCCGGC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGCGGCGAGGGCCCAGATaGTGCAGAGCAGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQRRGPR*CRAGVG
Trigger: CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCG...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGGGGCGGTGGCTGCATaGCTGAACCCTTGCACAAGT +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGGAVAA*LNPCTS
Trigger: ACTTGTGCAAGGGTTCAGTCATGCAGCCACCGCCCC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR TCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTCTCCTGGATTCTGCCTaGGCTCTGGGCTTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGLLDSA*ALGLPS
Trigger: ACTGGGCAAGCCCAGAGCTCAGGCAGAATCCAGGAG...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGGGGAGGGCTCCATCCTaGTGCCATACTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQGRAPS*CHTPAP
Trigger: GGGGGCTGGAGTATGGCATCAGGATGGAGCCCTCCC...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTCATTACGATGGGCGGTaGGGAGGGAGGCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGHYDGR*GGRHSV
Trigger: CACACTGTGCCTCCCTCCTCACCGCCCATCGTAATG...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGGACTCACTGGGCAGTaGCTCACAGCTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGGLTGQ*LTAGLG
Trigger: TCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACGAGGTGGCCCAGCCATaGCAGACGGGACCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADEVAQP*QTGPSG
Trigger: CCCAGACGGTCCCGTCTGGCATGGCTGGGCCACCTC...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTCATGTGGGTTTTGCCTaGTCAGGGGTCGGTCGAGCC +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGHVGFA*SGVGRA
Trigger: GGCTCGACCGACCCCTGAGCAGGCAAAACCCACATG...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAGTCACTGGGCAAGGCTaGTGGGGGAGCCACCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTVTGQG*WGSHQR
Trigger: CCTCTGGTGGCTCCCCCAGCAGCCTTGCCCAGTGAC...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGATGCCACCTCGGCTCTaGACCGGGGCCGCCGAGCTT +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARMPPRL*TGAAEL
Trigger: AAGCTCGGCGGCCCCGGTGCAGAGCCGAGGTGGCAT...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGCTCGCTGTGGACGCTaGGCCGGTCCACCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARARCGR*AGPPLP
Trigger: GGGAAGAGGTGGACCGGCGCAGCGTCCACAGCGAGC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGAGGCTGTGTGCGCTGTaGAGGCTCCGTGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQRLCAL*RLRAEC
Trigger: GCACTCGGCACGGAGCCTGCACAGCGCACACAGCCT...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGCAGCAAGGCCTCCATaGTGTGGACCTCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVAARPP*CGPPPR
Trigger: CCTTGGTGGAGGTCCACAGCATGGAGGCCTTGCTGC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCGGAGTGCCAGGACACTaGTGCGGGAGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAGVPGH*CGRAPS
Trigger: GGATGGAGCCCTCCCGCAGCAGTGTCCTGGCACTCC...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGACGCTCGGGCTCGAGTaGTCAGGGCTCGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARTLGLE*SGLGAG
Trigger: GCCTGCACCGAGCCCTGAGCACTCGAGCCCGAGCGT...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTACGCTCGGGCTCGAGTaGTCAGGGCTCGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGTLGLE*SGLGAG
Trigger: GCCTGCACCGAGCCCTGAGCACTCGAGCCCGAGCGT...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACCGTCAGGGAGCGTCTaGGGAGCTGAGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATPSGSV*GAEGSS
Trigger: GCTGCTGCCCTCAGCTCCGCAGACGCTCCCTGACGG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCACAGGGCACCCCGCTaGGAACAGGTCCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSHRAPR*EQVLQG
Trigger: GCCCTGAAGGACCTGTTCCCAGCGGGGTGCCCTGTG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGCATACTGCGAGCCGCTaGCATCCGGCACCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQHTASR*HPAPLC
Trigger: GCACAGGGGTGCCGGATGCCAGCGGCTCGCAGTATG...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACATACTGCGAGCCGCTaGCATCCGGCACCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTHTASR*HPAPLC
Trigger: GCACAGGGGTGCCGGATGCCAGCGGCTCGCAGTATG...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGAGCCTGTTGCTGGGGTaGCACCAGCTCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQSLLLG*HQLLLG
Trigger: GCCCAGCAGGAGCTGGTGCCACCCCAGCAACAGGCT...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAAGCCTGTTGCTGGGGTaGCACCAGCTCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTSLLLG*HQLLLG
Trigger: GCCCAGCAGGAGCTGGTGCCACCCCAGCAACAGGCT...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGACGGCACAGCTGCCTaGCCGGAGCCACTGGACACC +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVDGTAA*PEPLDT
Trigger: GGTGTCCAGTGGCTCCGGCCAGGCAGCTGTGCCGTC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGACGGCACAGCTGCCTaGCCGGAGCCACTGGACACC +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGDGTAA*PEPLDT
Trigger: GGTGTCCAGTGGCTCCGGCCAGGCAGCTGTGCCGTC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGGGCTGGCTCGGGAGCTaGGCCGCTCGGGCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQGWLGS*AARARD
Trigger: ATCCCGAGCCCGAGCGGCCCAGCTCCCGAGCCAGCC...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGTTCCGAGGAGTGGCTaGCTCGGGAGCTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARVPRSG*LGSWAA
Trigger: AGCGGCCCAGCTCCCGAGCCAGCCACTCCTCGGAAC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCACGTCTCCACAGCACGTaGACGCGGCAGGCATCCGTC +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSRLHST*TRQASV
Trigger: GACGGATGCCTGCCGCGTCCACGTGCTGTGGAGACG...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTAGTGGAAGGCTTGCGTaGCCAGCCCCATTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGSGRLA*PAPFPP
Trigger: TGGCGGAAATGGGGCTGGCCACGCAAGCCTTCCACT...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGGCAGGACTGGCCAATaGGCCGTCAGGGAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSGRTGQ*AVRERL
Trigger: CAGACGCTCCCTGACGGCCCATTGGCCAGTCCTGCC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCGGGGGCAGTGGCACTaGGAACATCGGCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSRGQWH*EHRHSG
Trigger: GCCAGAGTGCCGATGTTCCCAGTGCCACTGCCCCCG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTCATCGAGGTTGGAGGTaGGGGCGGGGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGHRGWR*GRGFLL
Trigger: GAGAAGAAAGCCCCGCCCCCACCTCCAACCTCGATG...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGGTTGTAGAAGGGCATaGCCCCGCTGGGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGGCRRA*PRWEGP
Trigger: GGGGCCCTCCCAGCGGGGCCATGCCCTTCTACAACC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGTTGAGCTCCCGGAGGTaGCGCAGGCCTGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTLSSRR*RRPVPA
Trigger: AGCTGGCACAGGCCTGCGCCACCTCCGGGAGCTCAA...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCATTGAGCTCCCGGAGGTaGCGCAGGCCTGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSLSSRR*RRPVPA
Trigger: AGCTGGCACAGGCCTGCGCCACCTCCGGGAGCTCAA...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCACTGCTGTGTCTCCCTaGGGGCGGGACGGAGATCGC +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSATAVSP*GRDGDR
Trigger: GCGATCTCCGTCCCGCCCCCAGGGAGACACAGCAGT...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCAGGCCCAGGAGGTGCTaGAGGTGTCAATGCACCAGA +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVRPRRC*RCQCTR
Trigger: TCTGGTGCATTGACACCTTCAGCACCTCCTGGGCCT...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR TCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCGAGCTTGGGTTCCGTaGCTGCTGCCCGGACATCGC +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLRAWVP*LLPGHR
Trigger: GCGATGTCCGGGCAGCAGTCACGGAACCCAAGCTCG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGCGAGGGGGCAGCTGCTaGCCCGCGTCGACCAGAACC +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQRGGSC*PASTRT
Trigger: GGTTCTGGTCGACGCGGGTCAGCAGCTGCCCCCTCG...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAAGCCGGGGCCACTGCTaGAATTGCTGCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSSRGHC*NCCGRC
Trigger: GCACCTACCGCAGCAATTTCAGCAGTGGCCCCGGCT...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGAGCCGGGGCCACTGCTaGAATTGCTGCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQSRGHC*NCCGRC
Trigger: GCACCTACCGCAGCAATTTCAGCAGTGGCCCCGGCT...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGATCCCGCCTGGGCCATaGGGTAGCAGAAGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLIPPGP*GSRSGP
Trigger: CGGCCCACTTCTGCTACCTCATGGCCCAGGCGGGAT...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCTCGGAGGCGCTGATTaGGAACACAGCGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSLGGAD*EHSALH
Trigger: GTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCACTCGGAGGCGCTGATTaGGAACACAGCGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSLGGAD*EHSALH
Trigger: GTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAG...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGCTCCTCGGAGGCGCTaGTTGAGAACACAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSAPRRR*LRTQRP
Trigger: AGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCGCTCCTCGGAGGCGCTaGTTGAGAACACAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAAPRRR*LRTQRP
Trigger: AGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGC...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCAGGGTGAACGATGTTaGCCCGAGGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSQGERC*PEGCGP
Trigger: AGGCCCACAGCCCTCGGGGCAACATCGTTCACCCTG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGTCACTGGGCAAGGCTaGTGGGGGAGCCACCAGAGG +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLVTGQG*WGSHQR
Trigger: CCTCTGGTGGCTCCCCCAGCAGCCTTGCCCAGTGAC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGTGGCACACAGCACCATaGCTGGGCACAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTWHTAP*LGTAGP
Trigger: TGGGCCAGCTGTGCCCAGGCATGGTGCTGTGTGCCA...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTAGGGCTGGGACACGCTaGCACGGTAATTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGRAGTR*HGNSGS
Trigger: TGAGCCAGAATTACCGTGGCAGCGTGTCCCAGCCCT...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGGCGGTGCCCCTGCGTaGGGAAGCATGTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVGGAPA*GSMCTA
Trigger: AGCTGTGCACATGCTTCCGCACGCAGGGGCACCGCC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCGCCCACAGAGTCGTTaGTGGGCTCTCACACTTCAC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVRPQSR*WALTLH
Trigger: GTGAAGTGTGAGAGCCCAGCAACGACTCTGTGGGCG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGGGTGGCACCAGCTCCTaGTGGGCTCTTTCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTGGTSS*WALSRP
Trigger: TGGCCTCGAAAGAGCCCAGCAGGAGCTGGTGCCACC...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTGGGGGAGAAGCCTGTTaGTGGGGTGGCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGGGEAC*WGGTSS
Trigger: GGAGCTGGTGCCACCCCAGCAACAGGCTTCTCCCCC...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCTGGGCCTGTCCCTGTaGGGGCAGACTTTCTGGATT +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVLGLSL*GQTFWI
Trigger: AATCCAGAAAGTCTGCCCGCACAGGGACAGGCCCAG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCAGGCTGTGTGCGCTGTaGAGGCTCCGTGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGRLCAL*RLRAEC
Trigger: GCACTCGGCACGGAGCCTGCACAGCGCACACAGCCT...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTAGGCTGTGTGCGCTGTaGAGGCTCCGTGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGRLCAL*RLRAEC
Trigger: GCACTCGGCACGGAGCCTGCACAGCGCACACAGCCT...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGGCCCGCATCTCCTCCTaGTCAGACGTGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQARISS*SDVCCS
Trigger: GCTGCAGCACACGTCTGAGCAGGAGGAGATGCGGGC...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGAATACAGGTGCGGCTaGGTCAGGATGCTCTTCGCG +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGEYRCG*VRMLFA
Trigger: CGCGAAGAGCATCCTGACGCAGCCGCACCTGTATTC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCAGAGACAGAGGTGGCTaGGTGGGACCCGAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSARDRGG*VGPESA
Trigger: TGCCGACTCGGGTCCCACGCAGCCACCTCTGTCTCT...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAGCTGGGAGGGCCCCCTaGAGCAGGGAGGTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRAGRAP*SREVAR
Trigger: CCTGGCGACCTCCCTGCTGCAGGGGGCCCTCCCAGC...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCGGTGGCGCAGGCCTGTaGCAGCTGAGCAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAGGAGL*QLSRVV
Trigger: TACAACCCTGCTCAGCTGGCACAGGCCTGCGCCACC...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGGGTGGCGCAGGCCTGTaGCAGCTGAGCAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTGGAGL*QLSRVV
Trigger: TACAACCCTGCTCAGCTGGCACAGGCCTGCGCCACC...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCCCAGCTCTGAGTCACTaGTGTGTCTCCCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAPALSH*CVSLGA
Trigger: CGCCCCCAGGGAGACACAGCAGTGACTCAGAGCTGG...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGCCAGCTCTGAGTCACTaGTGTGTCTCCCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQPALSH*CVSLGA
Trigger: CGCCCCCAGGGAGACACAGCAGTGACTCAGAGCTGG...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGACTGGCATGTGCTCTaGGCTGTGTCAGAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGDWHVL*AVSEVQ
Trigger: CTGGACCTCTGACACAGCCCAGAGCACATGCCAGTC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCACAGGGCACCCCGCTaGGAACAGGTCCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGHRAPR*EQVLQG
Trigger: GCCCTGAAGGACCTGTTCCCAGCGGGGTGCCCTGTG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCACGTCTCTTCCGTCACTaGGCAAGGCTGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSRLFRH*ARLLGE
Trigger: CTCCCCCAGCAGCCTTGCCCAGTGACGGAAGAGACG...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCATACTGCGAGCCGCTaGCATCCGGCACCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGHTASR*HPAPLC
Trigger: GCACAGGGGTGCCGGATGCCAGCGGCTCGCAGTATG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGGCCCATATCTGAACTaGTCACTCGGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGGPYLN*SLGEEG
Trigger: CCCTTCCTCCCCGAGTGACCAGTTCAGATATGGGCC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGTCAGGGGCTCCGGTGTaGCACACAGCACCATGCCTG +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQSGAPV*HTAPCL
Trigger: CAGGCATGGTGCTGTGTGCCACACCGGAGCCCCTGA...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGGTCTGCACTGCTTCTaGCGGACACAGGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVGLHCF*RTQVSL
Trigger: AAGGGAGACCTGTGTCCGCCAGAAGCAGTGCAGACC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACACTTCACGGGCCCCTaGGTCCTGGCTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATHFTGP*VLAEGL
Trigger: GAGGCCTTCAGCCAGGACCCAGGGGCCCGTGAAGTG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTGGCACCAGCTCCTGCTaGGCTCTTTCGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGGTSSC*ALSRPG
Trigger: GCCTGGCCTCGAAAGAGCCCAGCAGGAGCTGGTGCC...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGGCACCAGCTCCTGCTaGGCTCTTTCGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGGTSSC*ALSRPG
Trigger: GCCTGGCCTCGAAAGAGCCCAGCAGGAGCTGGTGCC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGAGCCTGTTGCTGGGGTaGCACCAGCTCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLSLLLG*HQLLLG
Trigger: GCCCAGCAGGAGCTGGTGCCACCCCAGCAACAGGCT...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGTGAGGAAAGAGAGCTaGGCCTCACCAGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVVRKES*ASPDSS
Trigger: GGAGGAGTCTGGTGAGGCCCAGCTCTCTTTCCTCAC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGTCTCCACAGCACGTaGACGCGGCAGGCATCCGTC +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADRLHST*TRQASV
Trigger: GACGGATGCCTGCCGCGTCCACGTGCTGTGGAGACG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAGGTGAACCAGCCACGTaGGTGCGGCCAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTGEPAT*VRPRTP
Trigger: AGGAGTCCTTGGCCGCACCCACGTGGCTGGTTCACC...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGGGGGCAGTGGCACTaGGAACATCGGCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADRGQWH*EHRHSG
Trigger: GCCAGAGTGCCGATGTTCCCAGTGCCACTGCCCCCG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGAGGTGGCACACCAGGTaGGAGGCCAGGCCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQRWHTR*EARPGG
Trigger: CCCTCCGGGCCTGGCCTCCCACCTGGTGTGCCACCT...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCCTTTCCTGCAGAGGTaGCACACCAGGTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSPFLQR*HTRWEA
Trigger: GGCCTCCCACCTGGTGTGCCACCTCTGCAGGAAAGG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGCCTTTCCTGCAGAGGTaGCACACCAGGTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTPFLQR*HTRWEA
Trigger: GGCCTCCCACCTGGTGTGCCACCTCTGCAGGAAAGG...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACTGCGGCACTATCCCTaGGTCTGGGCTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTLRHYP*VWAPGF
Trigger: GAAGCCAGGAGCCCAGACCCAGGGATAGTGCCGCAG...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGGGCCTCCGAGTCTaGCACCGTCCTCGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQGGLRV*HRPRGG
Trigger: ACCCCCTCGAGGACGGTGCCAGACTCGGAGGCCCCC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGCCGGCTCGCTCCGCTaGGTCCCGCTTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQAGSLR*VPLGFR
Trigger: CCTGAACCCAAGCGGGACCCAGCGGAGCGAGCCGGC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGGGAGTGGCGCGAGTaGAGCGACAAAGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSWEWRE*SDKVRR
Trigger: CCTGCGGACTTTGTCGCTCCACTCGCGCCACTCCCA...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACTTGAGCTCCCGGAGGTaGCGCAGGCCTGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADLSSRR*RRPVPA
Trigger: AGCTGGCACAGGCCTGCGCCACCTCCGGGAGCTCAA...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCTTGAGCTCCCGGAGGTaGCGCAGGCCTGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVLSSRR*RRPVPA
Trigger: AGCTGGCACAGGCCTGCGCCACCTCCGGGAGCTCAA...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGACTGCTGTGTCTCCCTaGGGGCGGGACGGAGATCGC +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLTAVSP*GRDGDR
Trigger: GCGATCTCCGTCCCGCCCCCAGGGAGACACAGCAGT...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTACTGCTGTGTCTCCCTaGGGGCGGGACGGAGATCGC +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGTAVSP*GRDGDR
Trigger: GCGATCTCCGTCCCGCCCCCAGGGAGACACAGCAGT...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCATGTGGCTCTCCTGTaGCAGAGACAGCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVHVALL*QRQLRL
Trigger: AAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGTGCAGAGCAGGGGTTaGGGTCTGCCTCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSVQSRG*GLPQSP
Trigger: GGGTGACTGAGGCAGACCCCAACCCCTGCTCTGCAC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGACTGGGCCACACGGTaGGCAGTCCCCAGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGDWATR*AVPSAL
Trigger: CAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCCTCCTTCCCAGTGACTaGGCCACACGGTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSALLPSD*ATRWAV
Trigger: GACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
3UTR CAA 72 bp GCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCTaGGAGAGGCCCTGGTTACTACCGACCATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ARDSLGSDSQLG*ERPWLLPTMWL
Trigger: GAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCCGAGAGCCCAACTGCTaGCTGCAGGTCTATCCCCCA +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAREPNC*LQVYPP
Trigger: TGGGGGATAGACCTGCAGTCAGCAGTTGGGCTCTCG...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAGCAACAGCTCCCTaGACCTCTCGGTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGTATAP*TSRSLS
Trigger: AGAGAGAGACCGAGAGGTTCAGGGAGCTGTTGCTGT...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACATTACGATGGGCGGTaGGGAGGGAGGCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTHYDGR*GGRHSV
Trigger: CACACTGTGCCTCCCTCCTCACCGCCCATCGTAATG...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCCATTACGATGGGCGGTaGGGAGGGAGGCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAHYDGR*GGRHSV
Trigger: CACACTGTGCCTCCCTCCTCACCGCCCATCGTAATG...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGGGACTCACTGGGCAGTaGCTCACAGCTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQGLTGQ*LTAGLG
Trigger: TCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCC...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCTCGGAGGCGCTGATTaGGAACACAGCGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGLGGAD*EHSALH
Trigger: GTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACGCTCCTCGGAGGCGCTaGTTGAGAACACAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADAPRRR*LRTQRP
Trigger: AGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGC...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGCTCCTCGGAGGCGCTaGTTGAGAACACAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVAPRRR*LRTQRP
Trigger: AGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAAGTGCTACCAACCTCTaGACCAACGTCCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTSATNL*TNVPQG
Trigger: CCCCTGGGGGACGTTGGTTCAGAGGTTGGTAGCACT...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCAGGGTGAACGATGTTaGCCCGAGGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGQGERC*PEGCGP
Trigger: AGGCCCACAGCCCTCGGGGCAACATCGTTCACCCTG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGGCCCCCAGTGGGTGGTaGGTACGGTTTTCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTAPSGW*VRFSGL
Trigger: TAGCCCAGAAAACCGTACGCACCACCCACTGGGGGC...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACATCCGGCACCCCTGTaGTCGCTGTGTCACCCCACA +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATHPAPL*SLCHPT
Trigger: TGTGGGGTGACACAGCGAGCACAGGGGTGCCGGATG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCTCAACATTCTCATACTaGGAGCCGCTGGCATCCGGC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVSTFSY*EPLASG
Trigger: GCCGGATGCCAGCGGCTCGCAGTATGAGAATGTTGA...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGTGGCTGCTCCAGGTTaGCAGGGGAAGCATCGGGCA +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVVAAPG*QGKHRA
Trigger: TGCCCGATGCTTCCCCTGGCAACCTGGAGCAGCCAC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGCTTGGGTTCCGTGACTaGTGCCCGGACATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQLGFRD*CPDIAS
Trigger: AGAGGCGATGTCCGGGCAGCAGTCACGGAACCCAAG...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTGGTGGCACCAGCTCCTaGTGGGCTCTTTCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGGGTSS*WALSRP
Trigger: TGGCCTCGAAAGAGCCCAGCAGGAGCTGGTGCCACC...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGCGGCTGCGTCAGGATaGTCTTCGCGATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLAAASG*SSRWPH
Trigger: GTGAGGCCATCGCGAAGAGCATCCTGACGCAGCCGC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGACCGGGGAATACAGGTaGGGCTGCGTCAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQTGEYR*GCVRML
Trigger: GAGCATCCTGACGCAGCCGCACCTGTATTCCCCGGT...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTGTGCTCAGGGCTCGGTaGAGGCACCGCCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAVLRAR*RHRQQR
Trigger: CCTCTGCTGGCGGTGCCTGCACCGAGCCCTGAGCAC...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAAGAGACAGAGGTGGCTaGGTGGGACCCGAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATRDRGG*VGPESA
Trigger: TGCCGACTCGGGTCCCACGCAGCCACCTCTGTCTCT...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGCAGGCGGGGCAGCTTaGACAGTCTTGGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLAGGAA*TVLGIE
Trigger: CTCGATGCCCAAGACTGTGCAAGCTGCCCCGCCTGC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCTGCAGGCCCTTCCCTaGCAGTCCCGTCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLLQALP*QSRLEA
Trigger: AGCTTCCAGACGGGACTGGCAGGGAAGGGCCTGCAG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCTGCAGGCCCTTCCCTaGCAGTCCCGTCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGLQALP*QSRLEA
Trigger: AGCTTCCAGACGGGACTGGCAGGGAAGGGCCTGCAG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAGGTGGCGCAGGCCTGTaGCAGCTGAGCAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATGGAGL*QLSRVV
Trigger: TACAACCCTGCTCAGCTGGCACAGGCCTGCGCCACC...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGGTGGCGCAGGCCTGTaGCAGCTGAGCAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGGGAGL*QLSRVV
Trigger: TACAACCCTGCTCAGCTGGCACAGGCCTGCGCCACC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGCTCTGAGTCACTaGTGTGTCTCCCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVPALSH*CVSLGA
Trigger: CGCCCCCAGGGAGACACAGCAGTGACTCAGAGCTGG...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGCCGAGGATTCCCGGCTaGAGGTGGCCCAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQPRIPG*RWPSHA
Trigger: GGCATGGCTGGGCCACCTCCAGCCGGGAATCCTCGG...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGTGGCCCCCACTGTCCTaGCATCTGCAGACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARWPPLS*HLQTRL
Trigger: CAGCCTGGTCTGCAGATGCCAGGACAGTGGGGGCCA...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGGAAATGAGGAACGCTaGTGGCACAGGGCACCCCGC +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGGNEER*WHRAPR
Trigger: GCGGGGTGCCCTGTGCCACCAGCGTTCCTCATTTCC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCGTCTCTTCCGTCACTaGGCAAGGCTGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGRLFRH*ARLLGE
Trigger: CTCCCCCAGCAGCCTTGCCCAGTGACGGAAGAGACG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGTGCGTACGGTTTTCTaGGCTATCTCCCCGGGCGAG +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSVRTVF*AISPGE
Trigger: CTCGCCCGGGGAGATAGCCCAGAAAACCGTACGCAC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCAGCCCCCAGTGGGTaGTGCGTACGGTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGPAPSG*CVRFSG
Trigger: CCCAGAAAACCGTACGCACCACCCACTGGGGGCTGG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCCAGCCCCCAGTGGGTaGTGCGTACGGTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADPAPSG*CVRFSG
Trigger: CCCAGAAAACCGTACGCACCACCCACTGGGGGCTGG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGCTCATTGCTGGGGCCTaGGAGAAGGGCCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARLIAGA*EKGLAE
Trigger: CTCTGCCAGGCCCTTCTCCCAGGCCCCAGCAATGAG...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCAGCAGCCTCATTGCTaGGGCCTGGGAGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADQQPHC*GLGEGP
Trigger: AGGCCCTTCTCCCAGGCCCCAGCAATGAGGCTGCTG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACTCAGGGGCTCCGGTGTaGCACACAGCACCATGCCTG +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADSGAPV*HTAPCL
Trigger: CAGGCATGGTGCTGTGTGCCACACCGGAGCCCCTGA...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGGACATCGCCTCTTCTaGAGGCTGAACAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVGHRLF*RLNNRW
Trigger: CCACCTGTTGTTCAGCCTCCAGAAGAGGCGATGTCC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGACTGTGCTGAGTTCTaGGCCTGTCCCTGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGDCAEF*ACPCAG
Trigger: GCCCGCACAGGGACAGGCCCAGAACTCAGCACAGTC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCTCCTTGCCTGGGAGGTaGCCGTTCCGAGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVSLPGR*PFRGVA
Trigger: AGCCACTCCTCGGAACGGCCACCTCCCAGGCAAGGA...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGCCGTGAAAGGAGCCTaGAGGAAGCGGGGCCTCGTA +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARAVKGA*RKRGLV
Trigger: TACGAGGCCCCGCTTCCTCCAGGCTCCTTTCACGGC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGGGTAGCCATACTCTaGGAAGCCGGGGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTRVAIL*EAGATA
Trigger: AGCAGTGGCCCCGGCTTCCCAGAGTATGGCTACCCT...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACTCTCTCGAGCGAGCTaGCGGCAGCCGCCGGACCAC +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRLSRAS*RQPPDH
Trigger: GTGGTCCGGCGGCTGCCGCCAGCTCGCTCGAGAGAG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGCCATCTGCACAAGCTaGCTGATCAACACCGGGGAA +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVAICTS*LINTGE
Trigger: TTCCCCGGTGTTGATCAGCCAGCTTGTGCAGATGGC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGGTGAACCAGCCACGTaGGTGCGGCCAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGGEPAT*VRPRTP
Trigger: AGGAGTCCTTGGCCGCACCCACGTGGCTGGTTCACC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGGTGAACCAGCCACGTaGGTGCGGCCAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLGEPAT*VRPRTP
Trigger: AGGAGTCCTTGGCCGCACCCACGTGGCTGGTTCACC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGGTGAACCAGCCACGTaGGTGCGGCCAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARGEPAT*VRPRTP
Trigger: AGGAGTCCTTGGCCGCACCCACGTGGCTGGTTCACC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATCCGCCAGCAGAGGGTTaGCGATCCCCAGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHPPAEG*RSPGLL
Trigger: CAGGAGCCCTGGGGATCGCCAACCCTCTGCTGGCGG...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACCTTTCCTGCAGAGGTaGCACACCAGGTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATPFLQR*HTRWEA
Trigger: GGCCTCCCACCTGGTGTGCCACCTCTGCAGGAAAGG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCTTTCCTGCAGAGGTaGCACACCAGGTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGPFLQR*HTRWEA
Trigger: GGCCTCCCACCTGGTGTGCCACCTCTGCAGGAAAGG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGCACTATCCCTGGGTCTaGGCTCCTGGCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQHYPWV*APGFLE
Trigger: CTCCAGGAAGCCAGGAGCCCAGACCCAGGGATAGTG...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCTGCGGCACTATCCCTaGGTCTGGGCTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADLRHYP*VWAPGF
Trigger: GAAGCCAGGAGCCCAGACCCAGGGATAGTGCCGCAG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCCATCGAGGTTGGAGGTaGGGGCGGGGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAHRGWR*GRGFLL
Trigger: GAGAAGAAAGCCCCGCCCCCACCTCCAACCTCGATG...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCTTGGGCATCGAGGTTaGAGGTGGGGGCGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGLGHRG*RWGRGF
Trigger: AAAGCCCCGCCCCCACCTCCAACCTCGATGCCCAAG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACTTGGGCATCGAGGTTaGAGGTGGGGGCGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATLGHRG*RWGRGF
Trigger: AAAGCCCCGCCCCCACCTCCAACCTCGATGCCCAAG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCTTGGGCATCGAGGTTaGAGGTGGGGGCGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVLGHRG*RWGRGF
Trigger: AAAGCCCCGCCCCCACCTCCAACCTCGATGCCCAAG...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGTGGGAGTGGCGCGAGTaGAGCGACAAAGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGWEWRE*SDKVRR
Trigger: CCTGCGGACTTTGTCGCTCCACTCGCGCCACTCCCA...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGCGGCGAGGGCCCAGATaGTGCAGAGCAGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQRRGPR*CRAGVG
Trigger: CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCG...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCTCCTTCCCAGTGACTaGGCCACACGGTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVLLPSD*ATRWAV
Trigger: GACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCAGACAGCCGGCTCTCTaGGGCTCCTTCCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSARQPAL*GSFPVT
Trigger: AGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCT...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAAGCAAATGGATCCGTaGCCGGCTGCAACGGGCAAG +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTKQMDP*PAATGK
Trigger: CTTGCCCGTTGCAGCCGGTCACGGATCCATTTGCTT...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR TCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAGGCTCACAGGGTCCCTaGGAGCTATCTCTGGCATGT +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTGSQGP*ELSLAC
Trigger: ACATGCCAGAGATAGCTCTCAGGGACCCTGTGAGCC...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR TCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAGCTGCTATAGCTGGATaGCACGCTGTCAGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTAAIAG*HAVRVH
Trigger: GTGCACCCTGACAGCGTGTCATCCAGCTATAGCAGC...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCGCTGCTATAGCTGGATaGCACGCTGTCAGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSAAIAG*HAVRVH
Trigger: GTGCACCCTGACAGCGTGTCATCCAGCTATAGCAGC...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACGAGAGCCCAACTGCTaGCTGCAGGTCTATCCCCCA +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATREPNC*LQVYPP
Trigger: TGGGGGATAGACCTGCAGTCAGCAGTTGGGCTCTCG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCGAGAGCCCAACTGCTaGCTGCAGGTCTATCCCCCA +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLREPNC*LQVYPP
Trigger: TGGGGGATAGACCTGCAGTCAGCAGTTGGGCTCTCG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCCGTCAAAACTCCCCGTaGAGCGAGGATCGTACCTCC +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSARQNSP*SEDRTS
Trigger: GGAGGTACGATCCTCGCTTCACGGGGAGTTTTGACG...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGCGTCAAAACTCCCCGTaGAGCGAGGATCGTACCTCC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQRQNSP*SEDRTS
Trigger: GGAGGTACGATCCTCGCTTCACGGGGAGTTTTGACG...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGGTGCGAGTGGGAGCTaGGGCTGCTGCGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNGASGS*GCCGGW
Trigger: CCAGCCGCCGCAGCAGCCTCAGCTCCCACTCGCACC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGGGCCGGCTGTCCTTCTaGAGGCAGATTGGGAATCAC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQGRLSF*RQIGNH
Trigger: GTGATTCCCAATCTGCCTTCAGAAGGACAGCCGGCC...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCGCATCCGTCCGGACATaGGCTGGTAGACTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSASVRT*AGRLSA
Trigger: TGCAGACAGTCTACCAGCTCATGTCCGGACGGATGC...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGATCCCGCCTGGGCCATaGGGTAGCAGAAGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQIPPGP*GSRSGP
Trigger: CGGCCCACTTCTGCTACCTCATGGCCCAGGCGGGAT...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTTCTGCACAAGCTGGCTaGTCAACACCGGGGAATACA +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGSAQAG*STPGNT
Trigger: TGTATTCCCCGGTGTTGATCAGCCAGCTTGTGCAGA...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGAGGGCTCCATCCTaGTGCCATACTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQGRAPS*CHTPAP
Trigger: GGGGGCTGGAGTATGGCATCAGGATGGAGCCCTCCC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGTCCCTGGGGTCTCACTaGAGACACTGGGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGSLGSH*RHWGWH
Trigger: GTGCCAACCCCAGTGTCTTCAGTGAGACCCCAGGGA...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313084.9
CDS-3UTR TCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGGGGCTCCTTCCCAGTaGCTGGGCCACACGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEGAPSQ*LGHTVG
Trigger: GCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCCC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTAGTGCTACCAACCTCTaGACCAACGTCCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGSATNL*TNVPQG
Trigger: CCCCTGGGGGACGTTGGTTCAGAGGTTGGTAGCACT...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCGGCCCGTCTCTGAGTTaGACAGGGTTGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSGPSLS*TGLSPP
Trigger: TGGTGGACTCAACCCTGTTCAACTCAGAGACGGGCC...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGAGCGGGAAATCAGTCTaGAGGACCGATGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQSGKSV*RTDASR
Trigger: CCTGCTGGCATCGGTCCTGCAGACTGATTTCCCGCT...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290037.10
CDS-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCGTCATGTGGGTTTTaGCTGCTCAGGGGTCGGTCG +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLPSCGF*LLRGRS
Trigger: CGACCGACCCCTGAGCAGGCAAAACCCACATGACGG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCGTCATGTGGGTTTTaGCTGCTCAGGGGTCGGTCG +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVPSCGF*LLRGRS
Trigger: CGACCGACCCCTGAGCAGGCAAAACCCACATGACGG...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGTCACTGGGCAAGGCTaGTGGGGGAGCCACCAGAGG +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQVTGQG*WGSHQR
Trigger: CCTCTGGTGGCTCCCCCAGCAGCCTTGCCCAGTGAC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGGGCGGTGCCCCTGCGTaGGGAAGCATGTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQGGAPA*GSMCTA
Trigger: AGCTGTGCACATGCTTCCGCACGCAGGGGCACCGCC...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGGGTTCCGTGACTGCTaGCCGGACATCGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVGFRDC*PDIASS
Trigger: AGAAGAGGCGATGTCCGGGCAGCAGTCACGGAACCC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCTTGGGTTCCGTGACTaGTGCCCGGACATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGLGFRD*CPDIAS
Trigger: AGAGGCGATGTCCGGGCAGCAGTCACGGAACCCAAG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGGGAGAAGCCTGTTaGTGGGGTGGCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQGGEAC*WGGTSS
Trigger: GGAGCTGGTGCCACCCCAGCAACAGGCTTCTCCCCC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCTGGGCCTGTCCCTGTaGGGGCAGACTTTCTGGATT +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSLGLSL*GQTFWI
Trigger: AATCCAGAAAGTCTGCCCGCACAGGGACAGGCCCAG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGTAATAGAGGGAGGCTaGGCCAGGCTCCGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARVIEGG*ARLRWV
Trigger: TACCCACCGGAGCCTGGCGCAGCCTCCCTCTATTAC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACGTAATAGAGGGAGGCTaGGCCAGGCTCCGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADVIEGG*ARLRWV
Trigger: TACCCACCGGAGCCTGGCGCAGCCTCCCTCTATTAC...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTAGGCTGTGTGCGCTGTaGAGGCTCCGTGCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETARLCAL*RLRAEC
Trigger: GCACTCGGCACGGAGCCTGCACAGCGCACACAGCCT...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGCAGCAAGGCCTCCATaGTGTGGACCTCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARAARPP*CGPPPR
Trigger: CCTTGGTGGAGGTCCACAGCATGGAGGCCTTGCTGC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGTGCTCAGACGTGTGCTaGAGCAAGGCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTCSDVC*SKASML
Trigger: CAGCATGGAGGCCTTGCTGCAGCACACGTCTGAGCA...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAAAGACCATGGCGAGGTaGGGCCTCCAATCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSKTMAR*GLQSPH
Trigger: ATGGGGAGATTGGAGGCCGCACCTCGCCATGGTCTT...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGAATACAGGTGCGGCTaGGTCAGGATGCTCTTCGCG +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSEYRCG*VRMLFA
Trigger: CGCGAAGAGCATCCTGACGCAGCCGCACCTGTATTC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCACCGGGGAATACAGGTaGGGCTGCGTCAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGTGEYR*GCVRML
Trigger: GAGCATCCTGACGCAGCCGCACCTGTATTCCCCGGT...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCAACCAGCCACGTGGGTaGGGCCAAGGACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGNQPRG*GQGLLF
Trigger: GAAGAGGAGTCCTTGGCCGCACCCACGTGGCTGGTT...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGAACCAGCCACGTGGGTaGGGCCAAGGACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGNQPRG*GQGLLF
Trigger: GAAGAGGAGTCCTTGGCCGCACCCACGTGGCTGGTT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGGGAGTGCCAGGACACTaGTGCGGGAGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQGVPGH*CGRAPS
Trigger: GGATGGAGCCCTCCCGCAGCAGTGTCCTGGCACTCC...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGCTGGGAGGGCCCCCTaGAGCAGGGAGGTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNAGRAP*SREVAR
Trigger: CCTGGCGACCTCCCTGCTGCAGGGGGCCCTCCCAGC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGCCAGACGGGACCGTCTaGGGCGGTGGCTGCATGACT +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQPDGTV*GGGCMT
Trigger: AGTCATGCAGCCACCGCCCCAGACGGTCCCGTCTGG...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGCCAGACGGGACCGTCTaGGGCGGTGGCTGCATGACT +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQPDGTV*GGGCMT
Trigger: AGTCATGCAGCCACCGCCCCAGACGGTCCCGTCTGG...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCACTTCAGGCTCTGAACTaGGACCGACCTCTGCACTCC +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSLQALN*DRPLHS
Trigger: GGAGTGCAGAGGTCGGTCCCAGTTCAGAGCCTGAAG...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGGAAGGGGATGCTGCTaGGGTGACCACACCGTCATG +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARGRGCC*GDHTVM
Trigger: CATGACGGTGTGGTCACCCCAGCAGCATCCCCTTCC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGGCCCTGATGTAGGATaGACGGGGTGGGGAAATGAG +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSGPDVG*TGWGNE
Trigger: CTCATTTCCCCACCCCGTCCATCCTACATCAGGGCC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGGTCTCCATGTTGTCTaGTGGCTGCTCCAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSGLHVV*WLLQVA
Trigger: GGCAACCTGGAGCAGCCACCAGACAACATGGAGACC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCGGTCTCCATGTTGTCTaGTGGCTGCTCCAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAGLHVV*WLLQVA
Trigger: GGCAACCTGGAGCAGCCACCAGACAACATGGAGACC...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTCCTCTTCTCGGGTGCTaGATACACAGTATCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGPLLGC*IHSIQG
Trigger: CCCTTGGATACTGTGTATCCAGCACCCGAGAAGAGG...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCACCACAGAGTCGTTGCTaGGCTCTCACACTTCACGGG +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSPQSRC*ALTLHG
Trigger: CCCGTGAAGTGTGAGAGCCCAGCAACGACTCTGTGG...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTTGGAACCAAGTTCTCTaGAACTGGCTGGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGWNQVL*NWLGWW
Trigger: CCACCATCCCAGCCAGTTCCAGAGAACTTGGTTCCA...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGCGAGGCTGTCAGAATaGGACGGGTTGTACACGTTT +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVARLSE*DGLYTF
Trigger: AAACGTGTACAACCCGTCCCATTCTGACAGCCTCGC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCTTTCGAGGCCAGGCTaGCCCTGGGCATCTTTCGTG +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGLSRPG*PWASFV
Trigger: CACGAAAGATGCCCAGGGCCAGCCTGGCCTCGAAAG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCTGCGCCAGGCTCCGGTaGGTACGGCAAAGAGTACTG +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGCARLR*VRQRVL
Trigger: CAGTACTCTTTGCCGTACCCACCGGAGCCTGGCGCA...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGTGCGCCAGGCTCCGGTaGGTACGGCAAAGAGTACTG +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARCARLR*VRQRVL
Trigger: CAGTACTCTTTGCCGTACCCACCGGAGCCTGGCGCA...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACATGCGCCAGGCTCCGGTaGGTACGGCAAAGAGTACTG +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATCARLR*VRQRVL
Trigger: CAGTACTCTTTGCCGTACCCACCGGAGCCTGGCGCA...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGGCTGGCTCGGGAGCTaGGCCGCTCGGGCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNGWLGS*AARARD
Trigger: ATCCCGAGCCCGAGCGGCCCAGCTCCCGAGCCAGCC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACAGGATATCCTTGCCTaGGAGGTGGCCGTTCCGAGG +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATQDILA*EVAVPR
Trigger: CCTCGGAACGGCCACCTCCCAGGCAAGGATATCCTG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCAGGATATCCTTGCCTaGGAGGTGGCCGTTCCGAGG +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVQDILA*EVAVPR
Trigger: CCTCGGAACGGCCACCTCCCAGGCAAGGATATCCTG...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACTATGGGTGTCGTCTTTaGCCAGGGGTCCCGGGAACG +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADYGCRL*PGVPGT
Trigger: CGTTCCCGGGACCCCTGGCCAAAGACGACACCCATA...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGCAGGACTGGCCAATaGGCCGTCAGGGAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQGRTGQ*AVRERL
Trigger: CAGACGCTCCCTGACGGCCCATTGGCCAGTCCTGCC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGGAACATCGGCACTCTaGCAGGACTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGGTSAL*QDWPMG
Trigger: GCCCATTGGCCAGTCCTGCCAGAGTGCCGATGTTCC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCGGGGGCAGTGGCACTaGGAACATCGGCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETARGQWH*EHRHSG
Trigger: GCCAGAGTGCCGATGTTCCCAGTGCCACTGCCCCCG...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGGGCCCCGGGGGCAGTaGCACTGGGAACATCGGCAC +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEGPRGQ*HWEHRH
Trigger: GTGCCGATGTTCCCAGTGCCACTGCCCCCGGGGCCC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGGGGCTCCTGGCTTCCTaGAGCAAGTGTCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTGLLAS*SKCLLS
Trigger: GGAAAGGAGACACTTGCTCCAGGAAGCCAGGAGCCC...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCTGGGTCTGGGCTCCTaGCTTCCTGGAGCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLLGLGS*LPGASV
Trigger: GACACTTGCTCCAGGAAGCCAGGAGCCCAGACCCAG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGCATCGAGGTTGGAGGTaGGGGCGGGGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARHRGWR*GRGFLL
Trigger: GAGAAGAAAGCCCCGCCCCCACCTCCAACCTCGATG...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCGCTGGGTCCCGCTTaGGTTCAGGACGTCAACGTA +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGPLGPA*VQDVNV
Trigger: TACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGCCGCTGGGTCCCGCTTaGGTTCAGGACGTCAACGTA +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGPLGPA*VQDVNV
Trigger: TACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGG...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCGCTGGGTCCCGCTTaGGTTCAGGACGTCAACGTA +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLPLGPA*VQDVNV
Trigger: TACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTCAAGTTAGAAGGAATTaGGAGTGGCGCGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGQVRRN*EWREWS
Trigger: GCTCCACTCGCGCCACTCCCAATTCCTTCTAACTTG...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGCCTGCCAGTCCCGTCTaGAAGCTGTGGTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQPASPV*KLWFFC
Trigger: GCAGAAGAACCACAGCTTCCAGACGGGACTGGCAGG...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCACCTGCCAGTCCCGTCTaGAAGCTGTGGTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSPASPV*KLWFFC
Trigger: GCAGAAGAACCACAGCTTCCAGACGGGACTGGCAGG...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGGCTTGGAGAGGCCCTaGTTACTACCGACCATGTGG +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSGLERP*LLPTMW
Trigger: CCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGCAGTGACTCACAGCTaGGCTTGGAGAGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGAVTHS*AWRGPG
Trigger: ACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACGCAGTGACTCACAGCTaGGCTTGGAGAGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADAVTHS*AWRGPG
Trigger: ACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGC...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGAGACAGCCGGCTCTCTaGGGCTCCTTCCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLRQPAL*GSFPVT
Trigger: AGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCT...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCAGACAGCCGGCTCTCTaGGGCTCCTTCCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVRQPAL*GSFPVT
Trigger: AGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCT...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAAGACAGCCGGCTCTCTaGGGCTCCTTCCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATRQPAL*GSFPVT
Trigger: AGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCT...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGGCTCACAGGGTCCCTaGGAGCTATCTCTGGCATGT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVGSQGP*ELSLAC
Trigger: ACATGCCAGAGATAGCTCTCAGGGACCCTGTGAGCC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR TCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGGACGGGGTGGGGAAATaGGGAACGCTGGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQDGVGK*GTLVAQ
Trigger: CTGTGCCACCAGCGTTCCTCATTTCCCCACCCCGTC...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGACGGGGTGGGGAAATaGGGAACGCTGGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHDGVGK*GTLVAQ
Trigger: CTGTGCCACCAGCGTTCCTCATTTCCCCACCCCGTC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGCTGCTATAGCTGGATaGCACGCTGTCAGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGAAIAG*HAVRVH
Trigger: GTGCACCCTGACAGCGTGTCATCCAGCTATAGCAGC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACCGCCGGACCACCAGTaGGGAAAGAGAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRPPDHQ*GKRAGP
Trigger: AGGCCCAGCTCTCTTTCCTCACTGGTGGTCCGGCGG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAACAGCAACAGCTCCCTaGACCTCTCGGTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSTATAP*TSRSLS
Trigger: AGAGAGAGACCGAGAGGTTCAGGGAGCTGTTGCTGT...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAGCAAGTAGCAGAGCGTaGCCCCACAGGCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATASSRA*PHRPFF
Trigger: GAAGAATGGCCTGTGGGGTCACGCTCTGCTACTTGC...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGCATCCGTCCGGACATaGGCTGGTAGACTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGASVRT*AGRLSA
Trigger: TGCAGACAGTCTACCAGCTCATGTCCGGACGGATGC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACGCATCCGTCCGGACATaGGCTGGTAGACTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADASVRT*AGRLSA
Trigger: TGCAGACAGTCTACCAGCTCATGTCCGGACGGATGC...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCATCCAAGAGGCCCCTTaGAGCCAGAGTGTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVIQEAP*SQSVAH
Trigger: ATGGGCGACACTCTGGCTTCAAGGGGCCTCTTGGAT...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAGGGAGGGCTCCATCCTaGTGCCATACTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRGRAPS*CHTPAP
Trigger: GGGGGCTGGAGTATGGCATCAGGATGGAGCCCTCCC...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGCTCGGAGGCGCTGATTaGGAACACAGCGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQLGGAD*EHSALH
Trigger: GTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAG...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGCTCCTCGGAGGCGCTaGTTGAGAACACAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHAPRRR*LRTQRP
Trigger: AGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCACTGGGACCGACCTCTaGACTCCTGTTCATCTCAGG +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSATGTDL*TPVHLR
Trigger: CCTGAGATGAACAGGAGTGCAGAGGTCGGTCCCAGT...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATTGGCACACAGCACCATaGCTGGGCACAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHWHTAP*LGTAGP
Trigger: TGGGCCAGCTGTGCCCAGGCATGGTGCTGTGTGCCA...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGGACACGCTGTCAGGGTaGACTGTATGCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTDTLSG*TVCSVA
Trigger: TGCCACACTGCATACAGTGCACCCTGACAGCGTGTC...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGAGGGCTGGGACACGCTaGCACGGTAATTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARRAGTR*HGNSGS
Trigger: TGAGCCAGAATTACCGTGGCAGCGTGTCCCAGCCCT...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGCCCACAGAGTCGTTaGTGGGCTCTCACACTTCAC +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADRPQSR*WALTLH
Trigger: GTGAAGTGTGAGAGCCCAGCAACGACTCTGTGGGCG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGATGCCACCTCGGCTCTaGACCGGGGCCGCCGAGCTT +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEMPPRL*TGAAEL
Trigger: AAGCTCGGCGGCCCCGGTGCAGAGCCGAGGTGGCAT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGTCTCAGAAGCACCAATaGCACCTCGGCTCTGCACCG +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLSQKHQ*HLGSAP
Trigger: CGGTGCAGAGCCGAGGTGGCATTGGTGCTTCTGAGA...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAAGCCCAACTGCTGACTaGAGGTCTATCCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSSPTAD*RSIPHQ
Trigger: TTGGTGGGGGATAGACCTGCAGTCAGCAGTTGGGCT...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCATCAGGCACCAGGGTaGCGTGTGCAGGTGGAACTA +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADHQAPG*RVQVEL
Trigger: TAGTTCCACCTGCACACGGCACCCTGGTGCCTGATG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCTGGGCCTGTCCCTGTaGGGGCAGACTTTCTGGATT +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGLGLSL*GQTFWI
Trigger: AATCCAGAAAGTCTGCCCGCACAGGGACAGGCCCAG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCTTCAGGATATCCTTaGCTGGGAGGTGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVPSGYP*LGGGRS
Trigger: GGAACGGCCACCTCCCAGGCAAGGATATCCTGAAGG...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCATCCCCGAAGGCAGAGTaGTCTCTCCTGTATGCGTCA +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSSPKAE*SLLYAS
Trigger: TGACGCATACAGGAGAGAGCACTCTGCCTTCGGGGA...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGCTCGCTGTGGACGCTaGGCCGGTCCACCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEARCGR*AGPPLP
Trigger: GGGAAGAGGTGGACCGGCGCAGCGTCCACAGCGAGC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGCCCGCATCTCCTCCTaGTCAGACGTGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHARISS*SDVCCS
Trigger: GCTGCAGCACACGTCTGAGCAGGAGGAGATGCGGGC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTCCTCCTCTTCCACCTaGTCCACTGCCTCATTCGTG +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSSSSST*STASFV
Trigger: CACGAATGAGGCAGTGGAGCAGGTGGAAGAGGAGGA...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCCTCCTCTTCCACCTaGTCCACTGCCTCATTCGTG +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSASSSST*STASFV
Trigger: CACGAATGAGGCAGTGGAGCAGGTGGAAGAGGAGGA...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCAAGACCATGGCGAGGTaGGGCCTCCAATCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGKTMAR*GLQSPH
Trigger: ATGGGGAGATTGGAGGCCGCACCTCGCCATGGTCTT...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCAAGACCATGGCGAGGTaGGGCCTCCAATCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVKTMAR*GLQSPH
Trigger: ATGGGGAGATTGGAGGCCGCACCTCGCCATGGTCTT...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAAAGACCATGGCGAGGTaGGGCCTCCAATCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATKTMAR*GLQSPH
Trigger: ATGGGGAGATTGGAGGCCGCACCTCGCCATGGTCTT...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGGCGGCTGCGTCAGGATaGTCTTCGCGATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQAAASG*SSRWPH
Trigger: GTGAGGCCATCGCGAAGAGCATCCTGACGCAGCCGC...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTAACTGGGAAGCCATCTaGACAAGCTGGCTGATCAAC +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGNWEAI*TSWLIN
Trigger: GTTGATCAGCCAGCTTGTGCAGATGGCTTCCCAGTT...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCCTGGCCTGTCCAACTaGTCCATCTCGGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGPGLSN*SISELG
Trigger: TCCGAGTTCCGAGATGGAGCAGTTGGACAGGCCAGG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGTGCTCAGGGCTCGGTaGAGGCACCGCCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEVLRAR*RHRQQR
Trigger: CCTCTGCTGGCGGTGCCTGCACCGAGCCCTGAGCAC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGCTGCAGGCCCTTCCCTaGCAGTCCCGTCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQLQALP*QSRLEA
Trigger: AGCTTCCAGACGGGACTGGCAGGGAAGGGCCTGCAG...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGCCAGCTCTGAGTCACTaGTGTGTCTCCCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQPALSH*CVSLGA
Trigger: CGCCCCCAGGGAGACACAGCAGTGACTCAGAGCTGG...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCAGTCACCCTCTCTTTaGTCCCAGCACCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVQSPSL*SQHLKG
Trigger: TCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGACTG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGCAGGGGTTGGGGTCTaGCTCAGTCACCCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGAGVGV*LSHPLF
Trigger: AAAGAGAGGGTGACTGAGGCAGACCCCAACCCCTGC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGCAGGGGTTGGGGTCTaGCTCAGTCACCCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGAGVGV*LSHPLF
Trigger: AAAGAGAGGGTGACTGAGGCAGACCCCAACCCCTGC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCTTAATTGGAGCGCTTaGCCCCGCCCCTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETALNWSA*PRPSPP
Trigger: AGGTGGCGAGGGGCGGGGCCAAGCGCTCCAATTAAG...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290037.10
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTGGACGAACTGCCCAGTaGTGTACTTTGGAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGGRTAQ*CTLERL
Trigger: CAGGCGCTCCAAAGTACACCACTGGGCAGTTCGTCC...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTTGCCCCGAGGGCTGTaGGCCTCCCTGCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVLPRGL*ASLHWP
Trigger: GGGCCAGTGCAGGGAGGCCCACAGCCCTCGGGGCAA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAGTAGGATGGACGGGGTaGGGAAATGAGGAACGCTGG +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATVGWTG*GNEERW
Trigger: CCAGCGTTCCTCATTTCCCCACCCCGTCCATCCTAC...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACGTAGGATGGACGGGGTaGGGAAATGAGGAACGCTGG +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADVGWTG*GNEERW
Trigger: CCAGCGTTCCTCATTTCCCCACCCCGTCCATCCTAC...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGTAGGATGGACGGGGTaGGGAAATGAGGAACGCTGG +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLVGWTG*GNEERW
Trigger: CCAGCGTTCCTCATTTCCCCACCCCGTCCATCCTAC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGGCCCTGATGTAGGATaGACGGGGTGGGGAAATGAG +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLGPDVG*TGWGNE
Trigger: CTCATTTCCCCACCCCGTCCATCCTACATCAGGGCC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCGGCCTAGCCCAGGGCTaGAGCAGAAATCGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAGLAQG*SRNRQS
Trigger: ACTTTGACGATTTCTGCTCCAGCCCTGGGCTAGGCC...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGCAGCAGCCTCATTGCTaGGGCCTGGGAGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQQQPHC*GLGEGP
Trigger: AGGCCCTTCTCCCAGGCCCCAGCAATGAGGCTGCTG...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAGGCCCATATCTGAACTaGTCACTCGGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATGPYLN*SLGEEG
Trigger: CCCTTCCTCCCCGAGTGACCAGTTCAGATATGGGCC...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGGCCCATATCTGAACTaGTCACTCGGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARGPYLN*SLGEEG
Trigger: CCCTTCCTCCCCGAGTGACCAGTTCAGATATGGGCC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGCACTGTATGCAGTGTaGCATCAGGGGCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGALYAV*HQGLRC
Trigger: ACACCGGAGCCCCTGATGCCACACTGCATACAGTGC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGCACTGTATGCAGTGTaGCATCAGGGGCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVALYAV*HQGLRC
Trigger: ACACCGGAGCCCCTGATGCCACACTGCATACAGTGC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCTTCTGCTGCTATAGCTaGATGACACGCTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVFCCYS*MTRCQG
Trigger: ACCCTGACAGCGTGTCATCCAGCTATAGCAGCAGAA...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGGCCGTGAAAGGAGCCTaGAGGAAGCGGGGCCTCGTA +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQAVKGA*RKRGLV
Trigger: TACGAGGCCCCGCTTCCTCCAGGCTCCTTTCACGGC...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTGCCGTGAAAGGAGCCTaGAGGAAGCGGGGCCTCGTA +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAAVKGA*RKRGLV
Trigger: TACGAGGCCCCGCTTCCTCCAGGCTCCTTTCACGGC...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGATGAAACTTGCTCCATaGCAGGCCAGACGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTMKLAP*QARRCR
Trigger: CCGACACCGTCTGGCCTGCCATGGAGCAAGTTTCAT...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTAGCCACACTGTTCTGTaGTCTCGTAACAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGSHTVL*SRNRSS
Trigger: GGAGCTTCTGTTACGAGACCACAGAACAGTGTGGCT...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAGTGAGGAAAGAGAGCTaGGCCTCACCAGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATVRKES*ASPDSS
Trigger: GGAGGAGTCTGGTGAGGCCCAGCTCTCTTTCCTCAC...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGTTGGACAAGACCATaGCGAGGTGCGGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTSWTRP*RGAASN
Trigger: ATTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACT...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGGGATGCTCTTCGCGATaGCCTCACAGTAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQGCSSR*PHSSGR
Trigger: CCTTCCACTACTGTGAGGCCATCGCGAAGAGCATCC...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGGCTGACTGAGTCCTaGCCTGTCCAACTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSWLTES*PVQLLH
Trigger: ATGGAGCAGTTGGACAGGCCAGGACTCAGTCAGCCA...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTGGCTGACTGAGTCCTaGCCTGTCCAACTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAWLTES*PVQLLH
Trigger: ATGGAGCAGTTGGACAGGCCAGGACTCAGTCAGCCA...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGCACTCTGGCAGGACTaGCCAATGGGCCGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHALWQD*PMGRQG
Trigger: TCCCTGACGGCCCATTGGCCAGTCCTGCCAGAGTGC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATAGGTGGCACACCAGGTaGGAGGCCAGGCCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNRWHTR*EARPGG
Trigger: CCCTCCGGGCCTGGCCTCCCACCTGGTGTGCCACCT...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGCCTTTCCTGCAGAGGTaGCACACCAGGTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQPFLQR*HTRWEA
Trigger: GGCCTCCCACCTGGTGTGCCACCTCTGCAGGAAAGG...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTGGGCTCCTGGCTTCCTaGAGCAAGTGTCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGGLLAS*SKCLLS
Trigger: GGAAAGGAGACACTTGCTCCAGGAAGCCAGGAGCCC...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGGGCTCCTGGCTTCCTaGAGCAAGTGTCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGGLLAS*SKCLLS
Trigger: GGAAAGGAGACACTTGCTCCAGGAAGCCAGGAGCCC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATCTGCGGCACTATCCCTaGGTCTGGGCTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHLRHYP*VWAPGF
Trigger: GAAGCCAGGAGCCCAGACCCAGGGATAGTGCCGCAG...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATACAGAGGTGGCTGCGTaGGACCCGAGTCGGCACGAT +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHTEVAA*DPSRHD
Trigger: ATCGTGCCGACTCGGGTCCCACGCAGCCACCTCTGT...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGCAGCTTGCACAGTCTTaGGCATCGAGGTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQQLAQS*ASRLEV
Trigger: CACCTCCAACCTCGATGCCCAAGACTGTGCAAGCTG...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCCTGCCAGTCCCGTCTaGAAGCTGTGGTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADPASPV*KLWFFC
Trigger: GCAGAAGAACCACAGCTTCCAGACGGGACTGGCAGG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAACCAGGTGCTTCCTCTaGCCAATCCTCCCTAGCCTT +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTTRCFL*PILPSL
Trigger: AAGGCTAGGGAGGATTGGCCAGAGGAAGCACCTGGT...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGACCAGGTGCTTCCTCTaGCCAATCCTCCCTAGCCTT +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQTRCFL*PILPSL
Trigger: AAGGCTAGGGAGGATTGGCCAGAGGAAGCACCTGGT...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACTGCTGTGTCTCCCTaGGGGCGGGACGGAGATCGC +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRTAVSP*GRDGDR
Trigger: GCGATCTCCGTCCCGCCCCCAGGGAGACACAGCAGT...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGGCTTGGAGAGGCCCTaGTTACTACCGACCATGTGG +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVGLERP*LLPTMW
Trigger: CCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCGGCGAGGGCCCAGATaGTGCAGAGCAGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAERRGPR*CRAGVG
Trigger: CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTCAGTCCCCAGCGCTTTaGGTACACAAAATCACCCAT +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGQSPAL*VHKITH
Trigger: ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTG...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGGTGGCTGCATGACTaGACCCTTGCACAAGTCGAT +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGRWLHD*TLAQVD
Trigger: ATCGACTTGTGCAAGGGTTCAGTCATGCAGCCACCG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR TCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAGACGGGGTGGGGAAATaGGGAACGCTGGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRDGVGK*GTLVAQ
Trigger: CTGTGCCACCAGCGTTCCTCATTTCCCCACCCCGTC...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGGAAGGGGCCCATATCTaGACTGGTCACTCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQEGAHI*TGHSGR
Trigger: CCTCCCCGAGTGACCAGTTCAGATATGGGCCCCTTC...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCTGGCAACACTTTGCTaGGAAGCGAGGCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSLATLC*EARLSE
Trigger: TTCTGACAGCCTCGCTTCTCAGCAAAGTGTTGCCAG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGTGTGCGACCAGCTCTaGGTCACTGCTGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHVCDQL*VTAVSP
Trigger: GGGAGACACAGCAGTGACTCAGAGCTGGTCGCACAC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATCATTACGATGGGCGGTaGGGAGGGAGGCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHHYDGR*GGRHSV
Trigger: CACACTGTGCCTCCCTCCTCACCGCCCATCGTAATG...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCTCTCTCAAAAACCGTaGACTAATGCCGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVLSQKP*TNAEGT
Trigger: GGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTCTCTCTCAAAAACCGTaGACTAATGCCGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGLSQKP*TNAEGT
Trigger: GGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAG...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGAGTGCTACCAACCTCTaGACCAACGTCCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQSATNL*TNVPQG
Trigger: CCCCTGGGGGACGTTGGTTCAGAGGTTGGTAGCACT...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAAGTCTGCAGGACCGATaGCAGCAGGCTCACGCACCG +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRSLQDR*QQAHAP
Trigger: CGGTGCGTGAGCCTGCTGGCATCGGTCCTGCAGACT...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290037.10
CDS-3UTR GCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTAAACGGACTGGCATGTaGTCTGGGCTGTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGKRTGM*SGLCQR
Trigger: CCTCTGACACAGCCCAGAGCACATGCCAGTCCGTTT...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGCATGTGGGTTTTGCCTaGTCAGGGGTCGGTCGAGCC +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQHVGFA*SGVGRA
Trigger: GGCTCGACCGACCCCTGAGCAGGCAAAACCCACATG...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAAGGTGGCTTCCACTTTaGAAGTGGCTCACCTCGTCT +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSRWLPL*KWLTSS
Trigger: AGACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCT...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGGCCCCCAGTGGGTGGTaGGTACGGTTTTCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQAPSGW*VRFSGL
Trigger: TAGCCCAGAAAACCGTACGCACCACCCACTGGGGGC...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGTCAGGGTGCACTGTATaGAGTGTGGCATCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARSGCTV*SVASGA
Trigger: AGCCCCTGATGCCACACTGCATACAGTGCACCCTGA...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGACACGCTGTCAGGGTaGACTGTATGCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLDTLSG*TVCSVA
Trigger: TGCCACACTGCATACAGTGCACCCTGACAGCGTGTC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGTTCCGTGGCTTCTGCTaGTATAGCTGGATGACACGC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQFRGFC*YSWMTR
Trigger: GCGTGTCATCCAGCTATAGCAGCAGAAGCCACGGAA...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCCACGTTGGCGCGATCTaGCTCAAATGGTTTTACCCC +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAHVGAI*LKWFYP
Trigger: GGGGTAAAACCATTTGAGGCAGATCGCGCCAACGTG...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTGCGTGCGGAAGCATGTaGACAGCTTCCGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAACGSM*TASVVE
Trigger: CTCCACCACGGAAGCTGTGCACATGCTTCCGCACGC...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGGGCCAGAAGGACGTTaGCTCCAAAATCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLGPEGR*LQNLAA
Trigger: AGCTGCCAGATTTTGGAGGCAACGTCCTTCTGGCCC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCAGGTGGCTGAGGTTTTaGACACACATAAAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSRWLRF*THIKRR
Trigger: CCGGCGCTTTATGTGTGTGCAAAACCTCAGCCACCT...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTGGGTTCCGTGACTGCTaGCCGGACATCGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAGFRDC*PDIASS
Trigger: AGAAGAGGCGATGTCCGGGCAGCAGTCACGGAACCC...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGGGAAGAGCACTTCCTaGCTTACGATCCTTTTGACT +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGGKSTS*LTILLT
Trigger: AGTCAAAAGGATCGTAAGGCAGGAAGTGCTCTTCCC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCGCTCGCTGTGGACGCTaGGCCGGTCCACCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVARCGR*AGPPLP
Trigger: GGGAAGAGGTGGACCGGCGCAGCGTCCACAGCGAGC...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCTTCCGTCCTCTGGATTaGTTCGTTGGTTGCGAACTT +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVFRPLD*FVGCEL
Trigger: AAGTTCGCAACCAACGAAGCAATCCAGAGGACGGAA...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGACCGGGGAATACAGGTaGGGCTGCGTCAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQTGEYR*GCVRML
Trigger: GAGCATCCTGACGCAGCCGCACCTGTATTCCCCGGT...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATAACCAGCCACGTGGGTaGGGCCAAGGACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHNQPRG*GQGLLF
Trigger: GAAGAGGAGTCCTTGGCCGCACCCACGTGGCTGGTT...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGGAGTGCCAGGACACTaGTGCGGGAGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEGVPGH*CGRAPS
Trigger: GGATGGAGCCCTCCCGCAGCAGTGTCCTGGCACTCC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATCCGTCAGGGAGCGTCTaGGGAGCTGAGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNPSGSV*GAEGSS
Trigger: GCTGCTGCCCTCAGCTCCGCAGACGCTCCCTGACGG...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAGCAGGCGGGGCAGCTTaGACAGTCTTGGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRAGGAA*TVLGIE
Trigger: CTCGATGCCCAAGACTGTGCAAGCTGCCCCGCCTGC...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGCACCAGAAAACGGACTaGCATGTGCTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARHQKTD*HVLWAV
Trigger: CACAGCCCAGAGCACATGCCAGTCCGTTTTCTGGTG...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCAGGATCAGAGTTATTaGCCAGGTGGCTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVQDQSY*PGGFHF
Trigger: AAAGTGGAAGCCACCTGGCCAATAACTCTGATCCTG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCATTCTGCCTGAGCTCTaGGCTTGCCCAGTGATTCAC +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAILPEL*ACPVIH
Trigger: GTGAATCACTGGGCAAGCCCAGAGCTCAGGCAGAAT...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCACTTCACCAACCACGTTaGCGCGATCTGCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSLHQPR*RDLPQM
Trigger: CATTTGAGGCAGATCGCGCCAACGTGGTTGGTGAAG...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGGAACCAAGTTCTCTaGAACTGGCTGGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSWNQVL*NWLGWW
Trigger: CCACCATCCCAGCCAGTTCCAGAGAACTTGGTTCCA...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGGCCGTTCCGAGGAGTaGCTGGCTCGGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWGRSEE*LARELG
Trigger: GCCCAGCTCCCGAGCCAGCCACTCCTCGGAACGGCC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGGTTTGCTTCATTaGGCGACTTCCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSASGLLH*ATSQEA
Trigger: GGCTTCCTGGGAAGTCGCCCAATGAAGCAAACCTGA...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGTCAGGTTTGCTTCATTaGGCGACTTCCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQSGLLH*ATSQEA
Trigger: GGCTTCCTGGGAAGTCGCCCAATGAAGCAAACCTGA...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGCCATCTGCACAAGCTaGCTGATCAACACCGGGGAA +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGAICTS*LINTGE
Trigger: TTCCCCGGTGTTGATCAGCCAGCTTGTGCAGATGGC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGCAAGGACTCCTCTTCTaGCTTCTCTTTCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTQGLLF*LLFQLG
Trigger: CCCCAGCTGAAAGAGAAGCCAGAAGAGGAGTCCTTG...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAGGTGAACCAGCCACGTaGGTGCGGCCAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRGEPAT*VRPRTP
Trigger: AGGAGTCCTTGGCCGCACCCACGTGGCTGGTTCACC...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGAGGTGGCACACCAGGTaGGAGGCCAGGCCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWRWHTR*EARPGG
Trigger: CCCTCCGGGCCTGGCCTCCCACCTGGTGTGCCACCT...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGCTGGGTCTGGGCTCCTaGCTTCCTGGAGCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQLGLGS*LPGASV
Trigger: GACACTTGCTCCAGGAAGCCAGGAGCCCAGACCCAG...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGAGAAGGAATTGGGAGTaGCGCGAGTGGAGCGACAAA +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQRRNWE*REWSDK
Trigger: TTTGTCGCTCCACTCGCGCCACTCCCAATTCCTTCT...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGCAAGTTAGAAGGAATTaGGAGTGGCGCGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQQVRRN*EWREWS
Trigger: GCTCCACTCGCGCCACTCCCAATTCCTTCTAACTTG...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCAGGGCATGGCCCCGCTaGGAGGGCCCCCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPRAWPR*EGPLQQ
Trigger: CTGCTGCAGGGGGCCCTCCCAGCGGGGCCATGCCCT...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCACCAGGTGCTTCCTCTaGCCAATCCTCCCTAGCCTT +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGTRCFL*PILPSL
Trigger: AAGGCTAGGGAGGATTGGCCAGAGGAAGCACCTGGT...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCAATAATTCATTACGATaGGCGGTGAGGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVNNSLR*AVRREA
Trigger: TGCCTCCCTCCTCACCGCCCATCGTAATGAATTATT...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGCAGTGACTCACAGCTaGGCTTGGAGAGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHAVTHS*AWRGPG
Trigger: ACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATAAGCGCGGGACTCACTaGGCAGTGACTCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHKRGTH*AVTHSW
Trigger: CCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTT...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCACCCCAGGGGAGAAAGTaGGTCATGTGGATTGTACCA +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSPQGRK*VMWIVP
Trigger: TGGTACAATCCACATGACCCACTTTCTCCCCTGGGG...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACCCCAGGGGAGAAAGTaGGTCATGTGGATTGTACCA +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTPQGRK*VMWIVP
Trigger: TGGTACAATCCACATGACCCACTTTCTCCCCTGGGG...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGCCTGTGGAACATTTTaGAAAACATCCTGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVACGTF*KTSWVV
Trigger: GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTAGCGGGACACGCCTGTaGAACATTTTGGAAAACATC +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGSGTRL*NILENI
Trigger: GATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCT...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCATAGCCGCTCCCGCCTaGAGGAAGCTTCTTGAATCA +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAIAAPA*RKLLES
Trigger: TGATTCAAGAAGCTTCCTCCAGGCGGGAGCGGCTAT...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCAGAGCTTAAAACCTTaGGCTCTGGGGCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGQSLKP*ALGQAL
Trigger: CAGAGCCTGCCCCAGAGCCCAAGGTTTTAAGCTCTG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGCAGAGCTTAAAACCTTaGGCTCTGGGGCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGQSLKP*ALGQAL
Trigger: CAGAGCCTGCCCCAGAGCCCAAGGTTTTAAGCTCTG...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
ENST00000453963.5
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACAGAGCTTAAAACCTTaGGCTCTGGGGCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATQSLKP*ALGQAL
Trigger: CAGAGCCTGCCCCAGAGCCCAAGGTTTTAAGCTCTG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
ENST00000453963.5
CDS-3UTR CCA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTTGGTTCTTCTGCATCTaGGGTTGGCACGAACAAGTT +
Preference number: 4 (lower is better)
Translates to: GLLPSDWATRWAVPSALGWFFCI*GWHEQV
Trigger: AACTTGTTCGTGCCAACCCCAGATGCAGAAGAACCA...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGCCCGTCTGGAAGCTGTaGTTCTTCTGCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGPVWKL*FFCIWG
Trigger: ACCCCAGATGCAGAAGAACCACAGCTTCCAGACGGG...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
3UTR CAA 72 bp AGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTaGGGTACACAAAATCACCCATGGTCCTCATCAGGC +
Preference number: 4 (lower is better)
Translates to: SDWATRWAVPSA*GTQNHPWSSSG
Trigger: GCCTGATGAGGACCATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGGGATGCTGCTGGGGTaGCCACACCGTCATGTGGGT +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEGMLLG*PHRHVG
Trigger: ACCCACATGACGGTGTGGTCACCCCAGCAGCATCCC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCTGGCCACGGCTGCTCTaGCGGCACAGCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPWPRLL*RHSCLA
Trigger: GGCCAGGCAGCTGTGCCGTCAGAGCAGCCGTGGCCA...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGGTGCGAGTGGGAGCTaGGGCTGCTGCGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLGASGS*GCCGGW
Trigger: CCAGCCGCCGCAGCAGCCTCAGCTCCCACTCGCACC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGATCACTTTGATAAGCTaGCCGCCAGGGCCAAACCTG +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARITLIS*PPGPNL
Trigger: CAGGTTTGGCCCTGGCGGTCAGCTTATCAAAGTGAT...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATCCGCCGGACCACCAGTaGGGAAAGAGAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNPPDHQ*GKRAGP
Trigger: AGGCCCAGCTCTCTTTCCTCACTGGTGGTCCGGCGG...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGCATCCGTCCGGACATaGGCTGGTAGACTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHASVRT*AGRLSA
Trigger: TGCAGACAGTCTACCAGCTCATGTCCGGACGGATGC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCATCCCGCCTGGGCCATaGGGTAGCAGAAGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVIPPGP*GSRSGP
Trigger: CGGCCCACTTCTGCTACCTCATGGCCCAGGCGGGAT...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGTCTGCACAAGCTGGCTaGTCAACACCGGGGAATACA +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLSAQAG*STPGNT
Trigger: TGTATTCCCCGGTGTTGATCAGCCAGCTTGTGCAGA...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTTCTGCACAAGCTGGCTaGTCAACACCGGGGAATACA +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGSAQAG*STPGNT
Trigger: TGTATTCCCCGGTGTTGATCAGCCAGCTTGTGCAGA...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCTCGGAGGCGCTGATTaGGAACACAGCGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAELGGAD*EHSALH
Trigger: GTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCACCACAGAAAGTAAAGTaGGGCTGGAAGCGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSPQKVK*GWKRLC
Trigger: GCAAAGACGCTTCCAGCCTCACTTTACTTTCTGTGG...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACGGGGCTCCTTCCCAGTaGCTGGGCCACACGGTGGGC +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHGAPSQ*LGHTVG
Trigger: GCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCCC...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGGGGCTCCTTCCCAGTaGCTGGGCCACACGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPGAPSQ*LGHTVG
Trigger: GCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCCC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTGGCCCGTCTCTGAGTTaGACAGGGTTGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAGPSLS*TGLSPP
Trigger: TGGTGGACTCAACCCTGTTCAACTCAGAGACGGGCC...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGCCTTCCGTGGCTTCTaGTGCTATAGCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGAFRGF*CYSWMT
Trigger: TGTCATCCAGCTATAGCAGCAGAAGCCACGGAAGGC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGAGGGCTGGGACACGCTaGCACGGTAATTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQRAGTR*HGNSGS
Trigger: TGAGCCAGAATTACCGTGGCAGCGTGTCCCAGCCCT...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGGGACAGACCTGGGGTaGACAGAGGGTCTCCATGTT +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHGTDLG*TEGLHV
Trigger: AACATGGAGACCCTCTGTGCACCCCAGGTCTGTCCC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATTCTCAGAAGCACCAATaGCACCTCGGCTCTGCACCG +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHSQKHQ*HLGSAP
Trigger: CGGTGCAGAGCCGAGGTGGCATTGGTGCTTCTGAGA...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTAAGACTGGAGGATTCTaGAGAGACTCAGTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGKTGGF*RDSVGG
Trigger: ACCGCCCACTGAGTCTCTGCAGAATCCTCCAGTCTT...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGCTGTGCAGGCTCCGTaGCGAGTGCTCGCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNAVQAP*RVLAVD
Trigger: GTCCACAGCGAGCACTCGGCACGGAGCCTGCACAGC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGAATTGCTGCGGTAGGTaGCGTAGGCAAAATCGCCGT +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGNCCGR*RRQNRR
Trigger: ACGGCGATTTTGCCTACGGCACCTACCGCAGCAATT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACAATTGCTGCGGTAGGTaGCGTAGGCAAAATCGCCGT +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADNCCGR*RRQNRR
Trigger: ACGGCGATTTTGCCTACGGCACCTACCGCAGCAATT...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGAATTGCTGCGGTAGGTaGCGTAGGCAAAATCGCCGT +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARNCCGR*RRQNRR
Trigger: ACGGCGATTTTGCCTACGGCACCTACCGCAGCAATT...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGAAGACCATGGCGAGGTaGGGCCTCCAATCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQKTMAR*GLQSPH
Trigger: ATGGGGAGATTGGAGGCCGCACCTCGCCATGGTCTT...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGCCGTCAGGGAGCGTCTaGGGAGCTGAGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWPSGSV*GAEGSS
Trigger: GCTGCTGCCCTCAGCTCCGCAGACGCTCCCTGACGG...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGAGAGACAGAGGTGGCTaGGTGGGACCCGAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAERDRGG*VGPESA
Trigger: TGCCGACTCGGGTCCCACGCAGCCACCTCTGTCTCT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGCGTTTCTTTCTTGGCTaGCTGTCCGGGTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQRFFLG*LSGSLC
Trigger: ACAAAGAGACCCGGACAGGCAGCCAAGAAAGAAACG...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGGAAGCCTTAAAGCTTTaGATCAGTGAGAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQEALKL*ISERRP
Trigger: GGGCCTCCTCTCACTGATGCAAAGCTTTAAGGCTTC...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGAAGCCTTAAAGCTTTaGATCAGTGAGAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSEALKL*ISERRP
Trigger: GGGCCTCCTCTCACTGATGCAAAGCTTTAAGGCTTC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAAAGCTGTGGTTCTTCTaGATCTGGGGTTGGCACGAA +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSKLWFF*IWGWHE
Trigger: TTCGTGCCAACCCCAGATGCAGAAGAACCACAGCTT...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCAAGCTGTGGTTCTTCTaGATCTGGGGTTGGCACGAA +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSKLWFF*IWGWHE
Trigger: TTCGTGCCAACCCCAGATGCAGAAGAACCACAGCTT...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATATTCCCGGCTGGAGGTaGCCCAGCCATGCCAGACGG +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNIPGWR*PSHARR
Trigger: CCGTCTGGCATGGCTGGGCCACCTCCAGCCGGGAAT...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGGACTGGCATGTGCTCTaGGCTGTGTCAGAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQDWHVL*AVSEVQ
Trigger: CTGGACCTCTGACACAGCCCAGAGCACATGCCAGTC...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTGGCCCTGATGTAGGATaGACGGGGTGGGGAAATGAG +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAGPDVG*TGWGNE
Trigger: CTCATTTCCCCACCCCGTCCATCCTACATCAGGGCC...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCGTCTCTTCCGTCACTaGGCAAGGCTGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAERLFRH*ARLLGE
Trigger: CTCCCCCAGCAGCCTTGCCCAGTGACGGAAGAGACG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCGAGTTATTGGCCAGGTaGCTTCCACTTTGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSELLAR*LPLCKW
Trigger: CCACTTGCAAAGTGGAAGCCACCTGGCCAATAACTC...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGATTCTGCCTGAGCTCTaGGCTTGCCCAGTGATTCAC +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGILPEL*ACPVIH
Trigger: GTGAATCACTGGGCAAGCCCAGAGCTCAGGCAGAAT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCCCTGGGAGAAGGGCCTaGCAGAGGCTGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPPGRRA*QRLPAP
Trigger: GGGGGCAGGCAGCCTCTGCCAGGCCCTTCTCCCAGG...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCATTGAGGGGCTCACTTaGCAGAACTTCTTGATTCTG +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVIEGLT*QNFLIL
Trigger: CAGAATCAAGAAGTTCTGCCAAGTGAGCCCCTCAAT...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCTTCACCAACCACGTTaGCGCGATCTGCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGLHQPR*RDLPQM
Trigger: CATTTGAGGCAGATCGCGCCAACGTGGTTGGTGAAG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGTCTGCACTGCTTCTaGCGGACACAGGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQGLHCF*RTQVSL
Trigger: AAGGGAGACCTGTGTCCGCCAGAAGCAGTGCAGACC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGCTCCATGTTGTCTGGTaGCTGCTCCAGGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQLHVVW*LLQVAR
Trigger: CCTGGCAACCTGGAGCAGCCACCAGACAACATGGAG...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGCCTCTTCTCGGGTGCTaGATACACAGTATCCAAGGG +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGPLLGC*IHSIQG
Trigger: CCCTTGGATACTGTGTATCCAGCACCCGAGAAGAGG...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGCCTCTTCTCGGGTGCTaGATACACAGTATCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARPLLGC*IHSIQG
Trigger: CCCTTGGATACTGTGTATCCAGCACCCGAGAAGAGG...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACGTTGCCTCCAAAATCTaGCAGCTCACTTTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADVASKI*QLTLRP
Trigger: TGGGCGCAAAGTGAGCTGCCAGATTTTGGAGGCAAC...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCCAAGTTCTCTGGAACTaGCTGGGATGGTGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAQVLWN*LGWWLN
Trigger: GTTCAACCACCATCCCAGCCAGTTCCAGAGAACTTG...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGCAGGCCCAGATTGTCTaGGATGACTGGCAACACTTT +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTQAQIV*DDWQHF
Trigger: AAAGTGTTGCCAGTCATCCCAGACAATCTGGGCCTG...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCCCGAAAACATGGCTTTaGGTAGTTGTGGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAPKTWL*VVVGEK
Trigger: CTTCTCCCCCACAACTACCCAAAGCCATGTTTTCGG...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCCAGGTCCTGAGGCGGTaGGCCGGGGGCAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPQVLRR*AGGKCR
Trigger: CCTGCACTTGCCCCCGGCCCACCGCCTCAGGACCTG...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACCAGGTCCTGAGGCGGTaGGCCGGGGGCAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHQVLRR*AGGKCR
Trigger: CCTGCACTTGCCCCCGGCCCACCGCCTCAGGACCTG...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAATGACATCCACCTTATaGGTGTCGTCTTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTMTSTL*VSSLAR
Trigger: CCTGGCCAAAGACGACACCCATAAGGTGGATGTCAT...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGATGACATCCACCTTATaGGTGTCGTCTTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTMTSTL*VSSLAR
Trigger: CCTGGCCAAAGACGACACCCATAAGGTGGATGTCAT...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCAGCCACACTGTTCTGTaGTCTCGTAACAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSSHTVL*SRNRSS
Trigger: GGAGCTTCTGTTACGAGACCACAGAACAGTGTGGCT...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTTCAGGTTTGCTTCATTaGGCGACTTCCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGSGLLH*ATSQEA
Trigger: GGCTTCCTGGGAAGTCGCCCAATGAAGCAAACCTGA...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGTGAGGAAAGAGAGCTaGGCCTCACCAGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHVRKES*ASPDSS
Trigger: GGAGGAGTCTGGTGAGGCCCAGCTCTCTTTCCTCAC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCAGAGGGTCGTTGATTaGGAGGCTGTTAGCAAACCT +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSQRVVD*EAVSKP
Trigger: AGGTTTGCTAACAGCCTCCCAATCAACGACCCTCTG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCTGTTGTTGTTCAAGTTaGACAAGACCATGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVCCCSS*TRPWRG
Trigger: ACCTCGCCATGGTCTTGTCCAACTTGAACAACAACA...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGCCGCCAGCAGAGGGTTaGCGATCCCCAGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWPPAEG*RSPGLL
Trigger: CAGGAGCCCTGGGGATCGCCAACCCTCTGCTGGCGG...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATCGGGGGCAGTGGCACTaGGAACATCGGCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNRGQWH*EHRHSG
Trigger: GCCAGAGTGCCGATGTTCCCAGTGCCACTGCCCCCG...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACGGGCCCCGGGGGCAGTaGCACTGGGAACATCGGCAC +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHGPRGQ*HWEHRH
Trigger: GTGCCGATGTTCCCAGTGCCACTGCCCCCGGGGCCC...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACTGGGTCTGGGCTCCTaGCTTCCTGGAGCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRLGLGS*LPGASV
Trigger: GACACTTGCTCCAGGAAGCCAGGAGCCCAGACCCAG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACGCCGGCTCGCTCCGCTaGGTCCCGCTTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHAGSLR*VPLGFR
Trigger: CCTGAACCCAAGCGGGACCCAGCGGAGCGAGCCGGC...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGTGGGAGTGGCGCGAGTaGAGCGACAAAGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEWEWRE*SDKVRR
Trigger: CCTGCGGACTTTGTCGCTCCACTCGCGCCACTCCCA...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGAGAAGGAATTGGGAGTaGCGCGAGTGGAGCGACAAA +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGRRNWE*REWSDK
Trigger: TTTGTCGCTCCACTCGCGCCACTCCCAATTCCTTCT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGCAAGTTAGAAGGAATTaGGAGTGGCGCGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARQVRRN*EWREWS
Trigger: GCTCCACTCGCGCCACTCCCAATTCCTTCTAACTTG...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCAAGTTAGAAGGAATTaGGAGTGGCGCGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLQVRRN*EWREWS
Trigger: GCTCCACTCGCGCCACTCCCAATTCCTTCTAACTTG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGGTTGTAGAAGGGCATaGCCCCGCTGGGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWGCRRA*PRWEGP
Trigger: GGGGCCCTCCCAGCGGGGCCATGCCCTTCTACAACC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACTTACTACCGACCATGTaGCTCTCCTGTGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADLLPTM*LSCGRD
Trigger: GTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAA...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTGGCTTGGAGAGGCCCTaGTTACTACCGACCATGTGG +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAGLERP*LLPTMW
Trigger: CCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCC...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGCAGTCCCCAGCGCTTTaGGTACACAAAATCACCCAT +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTQSPAL*VHKITH
Trigger: ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTG...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCGACTGGGCCACACGGTaGGCAGTCCCCAGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVDWATR*AVPSAL
Trigger: CAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTC...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAGGTCAGTTTTCAACCTaGATGACCACCCTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTGQFST*MTTLSH
Trigger: ATGGCTCAGGGTGGTCATCCAGGTTGAAAACTGACC...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGGAAAACATCCTGGGTaGTCTGGGCTAAATGATCAA +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVGKHPG*SGLNDQ
Trigger: TTGATCATTTAGCCCAGACCACCCAGGATGTTTTCC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAAGGCCCAGGAGGTGCTaGAGGTGTCAATGCACCAGA +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRRPRRC*RCQCTR
Trigger: TCTGGTGCATTGACACCTTCAGCACCTCCTGGGCCT...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR TCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACATCTGGGCTTGCCCAGTaGTTCACAATTCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTSGLAQ*FTILGF
Trigger: AAATCCCAGAATTGTGAATCACTGGGCAAGCCCAGA...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGGCTGGGATGGTGGTTaGACCAGCAAATTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHGWDGG*TSKLAG
Trigger: GCCTGCTAATTTGCTGGTTCAACCACCATCCCAGCC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCAGACTTTCTGGATTTaGCAGCTCCGAAAACATGGC +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSQTFWI*QLRKHG
Trigger: GCCATGTTTTCGGAGCTGTCAAATCCAGAAAGTCTG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTCGAGGGGGCAGCTGCTaGCCCGCGTCGACCAGAACC +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFRGGSC*PASTRT
Trigger: GGTTCTGGTCGACGCGGGTCAGCAGCTGCCCCCTCG...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTCGAGGGGGCAGCTGCTaGCCCGCGTCGACCAGAACC +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAARGGSC*PASTRT
Trigger: GGTTCTGGTCGACGCGGGTCAGCAGCTGCCCCCTCG...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCGGTGCGAGTGGGAGCTaGGGCTGCTGCGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSGASGS*GCCGGW
Trigger: CCAGCCGCCGCAGCAGCCTCAGCTCCCACTCGCACC...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGACAGCAACAGCTCCCTaGACCTCTCGGTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQTATAP*TSRSLS
Trigger: AGAGAGAGACCGAGAGGTTCAGGGAGCTGTTGCTGT...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGACAGCAACAGCTCCCTaGACCTCTCGGTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQTATAP*TSRSLS
Trigger: AGAGAGAGACCGAGAGGTTCAGGGAGCTGTTGCTGT...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGATCCCGCCTGGGCCATaGGGTAGCAGAAGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWIPPGP*GSRSGP
Trigger: CGGCCCACTTCTGCTACCTCATGGCCCAGGCGGGAT...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGTCCCTGGGGTCTCACTaGAGACACTGGGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAESLGSH*RHWGWH
Trigger: GTGCCAACCCCAGTGTCTTCAGTGAGACCCCAGGGA...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313084.9
CDS-3UTR TCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCATTACGATGGGCGGTaGGGAGGGAGGCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEHYDGR*GGRHSV
Trigger: CACACTGTGCCTCCCTCCTCACCGCCCATCGTAATG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCACAGAAAGTAAAGTaGGGCTGGAAGCGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLPQKVK*GWKRLC
Trigger: GCAAAGACGCTTCCAGCCTCACTTTACTTTCTGTGG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCCACAGAAAGTAAAGTaGGGCTGGAAGCGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADPQKVK*GWKRLC
Trigger: GCAAAGACGCTTCCAGCCTCACTTTACTTTCTGTGG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGGCCTTTCTCCAAGTaGCAAGGACAAATGGATCCA +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSWPFSK*QGQMDP
Trigger: TGGATCCATTTGTCCTTGTCACTTGGAGAAAGGCCA...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGCTGGAGGAAGCTTCTTaGATCAAAAGTCGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQLEEAS*IKSRGS
Trigger: ACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAG...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGTGCACAAGTCGATGCTaGTTACAGAAGGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTCTSRC*LQKEAG
Trigger: TCCTGCTTCCTTCTGTAAGCAGCATCGACTTGTGCA...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCCTTGCACAAGTCGATaGTGCTTACAGAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSPCTSR*CLQKEA
Trigger: TGCTTCCTTCTGTAAGCAGCATCGACTTGTGCAAGG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGAAACGGACTGGCATGTaGTCTGGGCTGTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQKRTGM*SGLCQR
Trigger: CCTCTGACACAGCCCAGAGCACATGCCAGTCCGTTT...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGACTGGGACCGACCTCTaGACTCCTGTTCATCTCAGG +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQTGTDL*TPVHLR
Trigger: CCTGAGATGAACAGGAGTGCAGAGGTCGGTCCCAGT...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTTTCACTCCTGGATTCTaGCTGAGCTCTGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAFTPGF*LSSGLA
Trigger: GGCAAGCCCAGAGCTCAGGCAGAATCCAGGAGTGAA...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCCATCCGGCACCCCTGTaGTCGCTGTGTCACCCCACA +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVHPAPL*SLCHPT
Trigger: TGTGGGGTGACACAGCGAGCACAGGGGTGCCGGATG...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATTCAGGGTGCACTGTATaGAGTGTGGCATCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHSGCTV*SVASGA
Trigger: AGCCCCTGATGCCACACTGCATACAGTGCACCCTGA...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATTCTGGCAGCTCACTTTaGGCCCACAGAGTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHSGSSL*AHRVVA
Trigger: AGCAACGACTCTGTGGGCGCAAAGTGAGCTGCCAGA...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACATCAGGCACCAGGGTaGCGTGTGCAGGTGGAACTA +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRHQAPG*RVQVEL
Trigger: TAGTTCCACCTGCACACGGCACCCTGGTGCCTGATG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGCTGGAGTAATAGCTTaGATAGTAATCGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVAGVIA*IVIALT
Trigger: AGTCAGAGCGATTACTATGCAAGCTATTACTCCAGC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGGTATGCGTCATACTCTaGATCACACCAATACCTCCG +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQVCVIL*ITPIPP
Trigger: CGGAGGTATTGGTGTGATGCAGAGTATGACGCATAC...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATTCCCCGAAGGCAGAGTaGTCTCTCCTGTATGCGTCA +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHSPKAE*SLLYAS
Trigger: TGACGCATACAGGAGAGAGCACTCTGCCTTCGGGGA...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCAGGCTCCGTGCCGAGTaGTCGCTGTGGACGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPRLRAE*SLWTLR
Trigger: GCGCAGCGTCCACAGCGAGCACTCGGCACGGAGCCT...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGATCCTGCTCAGACGTGTaGTGCAGCAAGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRSCSDV*CSKASM
Trigger: CATGGAGGCCTTGCTGCAGCACACGTCTGAGCAGGA...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACCTGGCCTGTCCAACTaGTCCATCTCGGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRPGLSN*SISELG
Trigger: TCCGAGTTCCGAGATGGAGCAGTTGGACAGGCCAGG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGCGTTTCTTTCTTGGCTaGCTGTCCGGGTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARRFFLG*LSGSLC
Trigger: ACAAAGAGACCCGGACAGGCAGCCAAGAAAGAAACG...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCGTTTCTTTCTTGGCTaGCTGTCCGGGTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLRFFLG*LSGSLC
Trigger: ACAAAGAGACCCGGACAGGCAGCCAAGAAAGAAACG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGATACTCTCCCCAAGTaGTACCAACCTCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSDTLPK*YQPLNQ
Trigger: TTGGTTCAGAGGTTGGTAGCACTTGGGGAGAGTATC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGAGTTATTGGCCAGGTaGCTTCCACTTTGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLELLAR*LPLCKW
Trigger: CCACTTGCAAAGTGGAAGCCACCTGGCCAATAACTC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTCAGGGGCTCCGGTGTaGCACACAGCACCATGCCTG +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVSGAPV*HTAPCL
Trigger: CAGGCATGGTGCTGTGTGCCACACCGGAGCCCCTGA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCAATTCTGGCTCACAGTaGTCTCGTCTGTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSNSGSQ*SRLFHL
Trigger: GAGGTGAAACAGACGAGACCACTGTGAGCCAGAATT...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACTCCATGTTGTCTGGTaGCTGCTCCAGGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRLHVVW*LLQVAR
Trigger: CCTGGCAACCTGGAGCAGCCACCAGACAACATGGAG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGACATCGCCTCTTCTaGAGGCTGAACAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQGHRLF*RLNNRW
Trigger: CCACCTGTTGTTCAGCCTCCAGAAGAGGCGATGTCC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCATCTGCAGAGACTCAGTaGGCGGTGAGGATAATAAAC +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSSAETQ*AVRIIN
Trigger: GTTTATTATCCTCACCGCCCACTGAGTCTCTGCAGA...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACAAGTTCTCTGGAACTaGCTGGGATGGTGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATQVLWN*LGWWLN
Trigger: GTTCAACCACCATCCCAGCCAGTTCCAGAGAACTTG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGGCACCAGCTCCTGCTaGGCTCTTTCGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWGTSSC*ALSRPG
Trigger: GCCTGGCCTCGAAAGAGCCCAGCAGGAGCTGGTGCC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCCGAAAACATGGCTTTaGGTAGTTGTGGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGPKTWL*VVVGEK
Trigger: CTTCTCCCCCACAACTACCCAAAGCCATGTTTTCGG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCACAGCTCCGAAAACATaGCTTTGGGTAGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVTAPKT*LWVVVG
Trigger: CCCCACAACTACCCAAAGCCATGTTTTCGGAGCTGT...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACAGGTCCTGAGGCGGTaGGCCGGGGGCAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEQVLRR*AGGKCR
Trigger: CCTGCACTTGCCCCCGGCCCACCGCCTCAGGACCTG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGGCCGTTCCGAGGAGTaGCTGGCTCGGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEGRSEE*LARELG
Trigger: GCCCAGCTCCCGAGCCAGCCACTCCTCGGAACGGCC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGGCTGCTGCGGCGGCTaGCCAGGCTGTGTGCGCTGT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEGCCGG*PGCVRC
Trigger: ACAGCGCACACAGCCTGGCCAGCCGCCGCAGCAGCC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGATGAAACTTGCTCCATaGCAGGCCAGACGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQMKLAP*QARRCR
Trigger: CCGACACCGTCTGGCCTGCCATGGAGCAAGTTTCAT...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGTATGGGTGTCGTCTTTaGCCAGGGGTCCCGGGAACG +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEYGCRL*PGVPGT
Trigger: CGTTCCCGGGACCCCTGGCCAAAGACGACACCCATA...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGAGCCACACTGTTCTGTaGTCTCGTAACAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGSHTVL*SRNRSS
Trigger: GGAGCTTCTGTTACGAGACCACAGAACAGTGTGGCT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCAGAGGGTCGTTGATTaGGAGGCTGTTAGCAAACCT +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGQRVVD*EAVSKP
Trigger: AGGTTTGCTAACAGCCTCCCAATCAACGACCCTCTG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGAGTTGGACAAGACCATaGCGAGGTGCGGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQSWTRP*RGAASN
Trigger: ATTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACT...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGATGCTCTTCGCGATaGCCTCACAGTAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQGCSSR*PHSSGR
Trigger: CCTTCCACTACTGTGAGGCCATCGCGAAGAGCATCC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTGCCATCTGCACAAGCTaGCTGATCAACACCGGGGAA +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAAICTS*LINTGE
Trigger: TTCCCCGGTGTTGATCAGCCAGCTTGTGCAGATGGC...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGCCATCTGCACAAGCTaGCTGATCAACACCGGGGAA +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQAICTS*LINTGE
Trigger: TTCCCCGGTGTTGATCAGCCAGCTTGTGCAGATGGC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCCCGCCAGCAGAGGGTTaGCGATCCCCAGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPPPAEG*RSPGLL
Trigger: CAGGAGCCCTGGGGATCGCCAACCCTCTGCTGGCGG...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGGCAGGACTGGCCAATaGGCCGTCAGGGAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWGRTGQ*AVRERL
Trigger: CAGACGCTCCCTGACGGCCCATTGGCCAGTCCTGCC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGGGCCCCGGGGGCAGTaGCACTGGGAACATCGGCAC +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLGPRGQ*HWEHRH
Trigger: GTGCCGATGTTCCCAGTGCCACTGCCCCCGGGGCCC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTAGGTGGCACACCAGGTaGGAGGCCAGGCCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAARWHTR*EARPGG
Trigger: CCCTCCGGGCCTGGCCTCCCACCTGGTGTGCCACCT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCTGGGTCTGGGCTCCTaGCTTCCTGGAGCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAELGLGS*LPGASV
Trigger: GACACTTGCTCCAGGAAGCCAGGAGCCCAGACCCAG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATACAGAGGTGGCTGCGTaGGACCCGAGTCGGCACGAT +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNTEVAA*DPSRHD
Trigger: ATCGTGCCGACTCGGGTCCCACGCAGCCACCTCTGT...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCACAGAGGTGGCTGCGTaGGACCCGAGTCGGCACGAT +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVTEVAA*DPSRHD
Trigger: ATCGTGCCGACTCGGGTCCCACGCAGCCACCTCTGT...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATCTTGGGCATCGAGGTTaGAGGTGGGGGCGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNLGHRG*RWGRGF
Trigger: AAAGCCCCGCCCCCACCTCCAACCTCGATGCCCAAG...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCAGCTTGCACAGTCTTaGGCATCGAGGTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAQLAQS*ASRLEV
Trigger: CACCTCCAACCTCGATGCCCAAGACTGTGCAAGCTG...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGCCGGCTCGCTCCGCTaGGTCCCGCTTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQAGSLR*VPLGFR
Trigger: CCTGAACCCAAGCGGGACCCAGCGGAGCGAGCCGGC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTGGGAGTGGCGCGAGTaGAGCGACAAAGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVWEWRE*SDKVRR
Trigger: CCTGCGGACTTTGTCGCTCCACTCGCGCCACTCCCA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGCCCGTCTGGAAGCTGTaGTTCTTCTGCATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQPVWKL*FFCIWG
Trigger: TCCCCAGATGCAGAAGAACCACAGCTTCCAGACGGG...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313084.9
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTAGGGCATGGCCCCGCTaGGAGGGCCCCCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASRAWPR*EGPLQQ
Trigger: CTGCTGCAGGGGGCCCTCCCAGCGGGGCCATGCCCT...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGGTTGTAGAAGGGCATaGCCCCGCTGGGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPGCRRA*PRWEGP
Trigger: GGGGCCCTCCCAGCGGGGCCATGCCCTTCTACAACC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAGGCTTGGAGAGGCCCTaGTTACTACCGACCATGTGG +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRGLERP*LLPTMW
Trigger: CCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCC...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCGTGCAGAGCAGGGGTTaGGGTCTGCCTCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVVQSRG*GLPQSP
Trigger: GGGTGACTGAGGCAGACCCCAACCCCTGCTCTGCAC...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTGGTCAGTTTTCAACCTaGATGACCACCCTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGGQFST*MTTLSH
Trigger: ATGGCTCAGGGTGGTCATCCAGGTTGAAAACTGACC...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGGTCAGTTTTCAACCTaGATGACCACCCTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGGQFST*MTTLSH
Trigger: ATGGCTCAGGGTGGTCATCCAGGTTGAAAACTGACC...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCATGGTTCTTCTGCATCTaGGGTTGGCACGAACAAGTT +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSWFFCI*GWHEQV
Trigger: AACTTGTTCGTGCCAACCCCAGATGCAGAAGAACCA...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACGGTGGCTGCATGACTaGACCCTTGCACAAGTCGAT +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRRWLHD*TLAQVD
Trigger: ATCGACTTGTGCAAGGGTTCAGTCATGCAGCCACCG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR TCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGGGATGCTGCTGGGGTaGCCACACCGTCATGTGGGT +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWGMLLG*PHRHVG
Trigger: ACCCACATGACGGTGTGGTCACCCCAGCAGCATCCC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGTCTGGGCTTGCCCAGTaGTTCACAATTCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLSGLAQ*FTILGF
Trigger: AAATCCCAGAATTGTGAATCACTGGGCAAGCCCAGA...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTTCGTCAAAGTCCGCTTaGCCAGATAAGCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGSSKSA*PDKPAF
Trigger: AAAAGCAGGCTTATCTGGTCAAGCGGACTTTGACGA...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGTCGTCAAAGTCCGCTTaGCCAGATAAGCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGSSKSA*PDKPAF
Trigger: AAAAGCAGGCTTATCTGGTCAAGCGGACTTTGACGA...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCTTTACCCCAACTAAGTaGGATTTTACCGGTTCGAAA +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVFTPTK*DFTGSK
Trigger: TTTCGAACCGGTAAAATCTCACTTAGTTGGGGTAAA...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGGCCGGCTGTCCTTCTaGAGGCAGATTGGGAATCAC +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEGRLSF*RQIGNH
Trigger: GTGATTCCCAATCTGCCTTCAGAAGGACAGCCGGCC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACCCGCCGGACCACCAGTaGGGAAAGAGAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHPPDHQ*GKRAGP
Trigger: AGGCCCAGCTCTCTTTCCTCACTGGTGGTCCGGCGG...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCAACAGCTCCCTaGACCTCTCGGTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRTATAP*TSRSLS
Trigger: AGAGAGAGACCGAGAGGTTCAGGGAGCTGTTGCTGT...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGATCCAAGAGGCCCCTTaGAGCCAGAGTGTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEIQEAP*SQSVAH
Trigger: ATGGGCGACACTCTGGCTTCAAGGGGCCTCTTGGAT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCGTGTGCGACCAGCTCTaGGTCACTGCTGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVVCDQL*VTAVSP
Trigger: GGGAGACACAGCAGTGACTCAGAGCTGGTCGCACAC...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGCTCTCTCAAAAACCGTaGACTAATGCCGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGLSQKP*TNAEGT
Trigger: GGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAG...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCTCTCTCAAAAACCGTaGACTAATGCCGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLLSQKP*TNAEGT
Trigger: GGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGCTGGAGGAAGCTTCTTaGATCAAAAGTCGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARLEEAS*IKSRGS
Trigger: ACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAG...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGTGTCGGAGCCACTGCTaGATTATTATTAGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLCRSHC*IIISPS
Trigger: AGACGGGCTAATAATAATGCAGCAGTGGCTCCGACA...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGAGTTGTCGGAGCCACTaGTGCATTATTATTAGCCCG +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGSCRSH*CIIISP
Trigger: CGGGCTAATAATAATGCAGCAGTGGCTCCGACAACT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAAGTTGTCGGAGCCACTaGTGCATTATTATTAGCCCG +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATSCRSH*CIIISP
Trigger: CGGGCTAATAATAATGCAGCAGTGGCTCCGACAACT...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCTGCTTTTGGACGAACTaGCCAGTGGTGTACTTTGGA +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGCFWTN*PVVYFG
Trigger: TCCAAAGTACACCACTGGGCAGTTCGTCCAAAAGCA...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGCAAGACAGGTGGACTaGTTTTGGACGAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHARQVD*FWTNCP
Trigger: TGGGCAGTTCGTCCAAAAGCAGTCCACCTGTCTTGC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCGCAGAGGCGGGCCGGTaGTCATTCTTCACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVAEAGR*SFFTPG
Trigger: TCCAGGAGTGAAGAATGAGCACCGGCCCGCCTCTGC...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTTCCGTGGCTTCTGCTaGTATAGCTGGATGACACGC +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQFRGFC*YSWMTR
Trigger: GCGTGTCATCCAGCTATAGCAGCAGAAGCCACGGAA...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGCAGCTGGTCTGCACTaGTTCTGGCGGACACAGGTC +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNAAGLH*FWRTQV
Trigger: GACCTGTGTCCGCCAGAAGCAGTGCAGACCAGCTGC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACGGGCGGCAGCTGGTCTaGACTGCTTCTGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHGRQLV*TASGGH
Trigger: GTGTCCGCCAGAAGCAGTGCAGACCAGCTGCCGCCC...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGATCTGGCAGCTCACTTTaGGCCCACAGAGTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRSGSSL*AHRVVA
Trigger: AGCAACGACTCTGTGGGCGCAAAGTGAGCTGCCAGA...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGAGGTGGCTGAGGTTTTaGACACACATAAAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQRWLRF*THIKRR
Trigger: CCGGCGCTTTATGTGTGTGCAAAACCTCAGCCACCT...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCCTTGGGTTCCGTGACTaGTGCCCGGACATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVLGFRD*CPDIAS
Trigger: AGAGGCGATGTCCGGGCAGCAGTCACGGAACCCAAG...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTATGCCACCTCGGCTCTaGACCGGGGCCGCCGAGCTT +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFMPPRL*TGAAEL
Trigger: AAGCTCGGCGGCCCCGGTGCAGAGCCGAGGTGGCAT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGTATGCGTCATACTCTaGATCACACCAATACCTCCG +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGVCVIL*ITPIPP
Trigger: CGGAGGTATTGGTGTGATGCAGAGTATGACGCATAC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGTGCTCTCTCCTGTATaGGTCATACTCTGCATCACA +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGVLSPV*VILCIT
Trigger: TGTGATGCAGAGTATGACGCATACAGGAGAGAGCAC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAGTGCTCTCTCCTGTATaGGTCATACTCTGCATCACA +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATVLSPV*VILCIT
Trigger: TGTGATGCAGAGTATGACGCATACAGGAGAGAGCAC...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAAGGCTCCGTGCCGAGTaGTCGCTGTGGACGCTGCGC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHERLRAE*SLWTLR
Trigger: GCGCAGCGTCCACAGCGAGCACTCGGCACGGAGCCT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACGCTGTGCAGGCTCCGTaGCGAGTGCTCGCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHAVQAP*RVLAVD
Trigger: GTCCACAGCGAGCACTCGGCACGGAGCCTGCACAGC...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGCAGCAAGGCCTCCATaGTGTGGACCTCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNAARPP*CGPPPR
Trigger: CCTTGGTGGAGGTCCACAGCATGGAGGCCTTGCTGC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGCCCGCATCTCCTCCTaGTCAGACGTGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWARISS*SDVCCS
Trigger: GCTGCAGCACACGTCTGAGCAGGAGGAGATGCGGGC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCCAGGCCATTCTTCATTaGAGACTCCAAAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAQAILH*RLQSIL
Trigger: AAGGATGCTTTGGAGTCTGCAATGAAGAATGGCCTG...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGTTCCGTCCTCTGGATTaGTTCGTTGGTTGCGAACTT +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARFRPLD*FVGCEL
Trigger: AAGTTCGCAACCAACGAAGCAATCCAGAGGACGGAA...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCTTCCGTCCTCTGGATTaGTTCGTTGGTTGCGAACTT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVFRPLD*FVGCEL
Trigger: AAGTTCGCAACCAACGAAGCAATCCAGAGGACGGAA...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGTGCTCAGGGCTCGGTaGAGGCACCGCCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFVLRAR*RHRQQR
Trigger: CCTCTGCTGGCGGTGCCTGCACCGAGCCCTGAGCAC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGTGCTCAGGGCTCGGTaGAGGCACCGCCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLVLRAR*RHRQQR
Trigger: CCTCTGCTGGCGGTGCCTGCACCGAGCCCTGAGCAC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGAGCTCTGGTTCCTGCTaGTCTTCTAGAGTACATGTT +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQSSGSC*SSRVHV
Trigger: AACATGTACTCTAGAAGAGCAGCAGGAACCAGAGCT...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGATACTCTCCCCAAGTaGTACCAACCTCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVDTLPK*YQPLNQ
Trigger: TTGGTTCAGAGGTTGGTAGCACTTGGGGAGAGTATC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACGATACTCTCCCCAAGTaGTACCAACCTCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADDTLPK*YQPLNQ
Trigger: TTGGTTCAGAGGTTGGTAGCACTTGGGGAGAGTATC...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACCCAGTGGTGTACTTTaGAGCGCCTGTCTACTAAAA +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATPSGVL*SACLLK
Trigger: TTTTAGTAGACAGGCGCTCCAAAGTACACCACTGGG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCTGAGAGCTATCTCTaGCATGTGTGTGAGGAACAA +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVPESYL*HVCEEQ
Trigger: TTGTTCCTCACACACATGCCAGAGATAGCTCTCAGG...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGGTAGTGAGGAAGATATaGCAGAGTCTGAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQVVRKI*QSLNFR
Trigger: CCTGAAGTTCAGACTCTGCCATATCTTCCTCACTAC...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTTGCCCCGAGGGCTGTaGGCCTCCCTGCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSLPRGL*ASLHWP
Trigger: GGGCCAGTGCAGGGAGGCCCACAGCCCTCGGGGCAA...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTTTGCCCCGAGGGCTGTaGGCCTCCCTGCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASLPRGL*ASLHWP
Trigger: GGGCCAGTGCAGGGAGGCCCACAGCCCTCGGGGCAA...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGGAAATGAGGAACGCTaGTGGCACAGGGCACCCCGC +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWGNEER*WHRAPR
Trigger: GCGGGGTGCCCTGTGCCACCAGCGTTCCTCATTTCC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCAGGATCAGAGTTATTaGCCAGGTGGCTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADQDQSY*PGGFHF
Trigger: AAAGTGGAAGCCACCTGGCCAATAACTCTGATCCTG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGATTGAGGGGCTCACTTaGCAGAACTTCTTGATTCTG +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQIEGLT*QNFLIL
Trigger: CAGAATCAAGAAGTTCTGCCAAGTGAGCCCCTCAAT...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCTTCACCAACCACGTTaGCGCGATCTGCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETALHQPR*RDLPQM
Trigger: CATTTGAGGCAGATCGCGCCAACGTGGTTGGTGAAG...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCCACTTCACGGGCCCCTaGGTCCTGGCTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPHFTGP*VLAEGL
Trigger: GAGGCCTTCAGCCAGGACCCAGGGGCCCGTGAAGTG...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCACAGAGTCGTTGCTaGGCTCTCACACTTCACGGG +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEPQSRC*ALTLHG
Trigger: CCCGTGAAGTGTGAGAGCCCAGCAACGACTCTGTGG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCTCCTCTCCCATTTTaGGAGGATTCTCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGPPLPF*EDSQGS
Trigger: AGAACCTTGAGAATCCTCCCAAAATGGGAGAGGAGG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCTCCTCTCCCATTTTaGGAGGATTCTCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLPPLPF*EDSQGS
Trigger: AGAACCTTGAGAATCCTCCCAAAATGGGAGAGGAGG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCAACTGGCTGGGATGGTaGTTGAACCAGCAAATTAGC +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVNWLGW*LNQQIS
Trigger: GCTAATTTGCTGGTTCAACCACCATCCCAGCCAGTT...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGTGGAACCAAGTTCTCTaGAACTGGCTGGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQWNQVL*NWLGWW
Trigger: CCACCATCCCAGCCAGTTCCAGAGAACTTGGTTCCA...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCTGTCTTCCTGATGACTaGAATGGTTTGCCTTATTAC +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVCLPDD*NGLPYY
Trigger: GTAATAAGGCAAACCATTCCAGTCATCAGGAAGACA...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGCGAGGCTGTCAGAATaGGACGGGTTGTACACGTTT +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQARLSE*DGLYTF
Trigger: AAACGTGTACAACCCGTCCCATTCTGACAGCCTCGC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGACGGCACAGCTGCCTaGCCGGAGCCACTGGACACC +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLDGTAA*PEPLDT
Trigger: GGTGTCCAGTGGCTCCGGCCAGGCAGCTGTGCCGTC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCCAGGATATCCTTGCCTaGGAGGTGGCCGTTCCGAGG +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVQDILA*EVAVPR
Trigger: CCTCGGAACGGCCACCTCCCAGGCAAGGATATCCTG...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGACGATCCCAGTGACCTaGATCTCCATAATCGTACTG +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARTIPVT*ISIIVL
Trigger: CAGTACGATTATGGAGATCCAGGTCACTGGGATCGT...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAACGATCCCAGTGACCTaGATCTCCATAATCGTACTG +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATTIPVT*ISIIVL
Trigger: CAGTACGATTATGGAGATCCAGGTCACTGGGATCGT...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTATGGGTGTCGTCTTTaGCCAGGGGTCCCGGGAACG +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVYGCRL*PGVPGT
Trigger: CGTTCCCGGGACCCCTGGCCAAAGACGACACCCATA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAAGTTGGACAAGACCATaGCGAGGTGCGGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRSWTRP*RGAASN
Trigger: ATTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACT...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCATGAACTTAAACACCTaGAAACTAGGCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGMNLNT*KLGRGQ
Trigger: CTGCCCCCTGCCTAGTTTCCAGGTGTTTAAGTTCAT...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGCAAGGACTCCTCTTCTaGCTTCTCTTTCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQQGLLF*LLFQLG
Trigger: CCCCAGCTGAAAGAGAAGCCAGAAGAGGAGTCCTTG...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATCAAGGACTCCTCTTCTaGCTTCTCTTTCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHQGLLF*LLFQLG
Trigger: CCCCAGCTGAAAGAGAAGCCAGAAGAGGAGTCCTTG...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGATGGCTGACTGAGTCCTaGCCTGTCCAACTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRWLTES*PVQLLH
Trigger: ATGGAGCAGTTGGACAGGCCAGGACTCAGTCAGCCA...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGCACTCTGGCAGGACTaGCCAATGGGCCGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWALWQD*PMGRQG
Trigger: TCCCTGACGGCCCATTGGCCAGTCCTGCCAGAGTGC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTAGAAGGAATTGGGAGTaGCGCGAGTGGAGCGACAAA +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETARRNWE*REWSDK
Trigger: TTTGTCGCTCCACTCGCGCCACTCCCAATTCCTTCT...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGGTTGTAGAAGGGCATaGCCCCGCTGGGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAGCRRA*PRWEGP
Trigger: GGGGCCCTCCCAGCGGGGCCATGCCCTTCTACAACC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGAATAATTCATTACGATaGGCGGTGAGGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGNNSLR*AVRREA
Trigger: TGCCTCCCTCCTCACCGCCCATCGTAATGAATTATT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCATGTGGCTCTCCTGTaGCAGAGACAGCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEHVALL*QRQLRL
Trigger: AAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATTTACTACCGACCATGTaGCTCTCCTGTGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHLLPTM*LSCGRD
Trigger: GTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAA...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGCCCCAGGGGAGAAAGTaGGTCATGTGGATTGTACCA +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQPQGRK*VMWIVP
Trigger: TGGTACAATCCACATGACCCACTTTCTCCCCTGGGG...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCTCAAAGTCTCAGTGTaGCAAAACTCGGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADLKVSV*QNSGQK
Trigger: TTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACTCAAAGTCTCAGTGTaGCAAAACTCGGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATLKVSV*QNSGQK
Trigger: TTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGCCTGTGGAACATTTTaGAAAACATCCTGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVACGTF*KTSWVV
Trigger: GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCAGCGGGACACGCCTGTaGAACATTTTGGAAAACATC +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVSGTRL*NILENI
Trigger: GATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCT...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCAGCGGGACACGCCTGTaGAACATTTTGGAAAACATC +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGSGTRL*NILENI
Trigger: GATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCT...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGTTGAATCAAAAGTCGTaGCAGTCGACCCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGLNQKS*QSTPEQ
Trigger: CTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAA...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTATAGCCGCTCCCGCCTaGAGGAAGCTTCTTGAATCA +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAIAAPA*RKLLES
Trigger: TGATTCAAGAAGCTTCCTCCAGGCGGGAGCGGCTAT...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCTGGTTCTTCTGCATCTaGGGTTGGCACGAACAAGTT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVWFFCI*GWHEQV
Trigger: AACTTGTTCGTGCCAACCCCAGATGCAGAAGAACCA...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGTTTCCAACTTCTTGCTaGATGAATGTGCCAACCAGC +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLFPTSC*MNVPTS
Trigger: GCTGGTTGGCACATTCATTCAGCAAGAAGTTGGAAA...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATCCTGGGCATCTTTCGTaGCCTGCTGATAAAAACGGT +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHPGHLS*PADKNG
Trigger: ACCGTTTTTATCAGCAGGTCACGAAAGATGCCCAGG...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCACTGCCTCATTCGTaGAATCAATCAGGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVPLPHS*NQSGLL
Trigger: AAGCAAACCTGATTGATTTCACGAATGAGGCAGTGG...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTATCCCGCCTGGGCCATaGGGTAGCAGAAGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFIPPGP*GSRSGP
Trigger: CGGCCCACTTCTGCTACCTCATGGCCCAGGCGGGAT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGGGAGGGCTCCATCCTaGTGCCATACTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEGRAPS*CHTPAP
Trigger: GGGGGCTGGAGTATGGCATCAGGATGGAGCCCTCCC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCTTCGGCAAACAATTCTaGGTCAAAGATTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVFGKQF*VKDSVF
Trigger: AAAGACTGAATCTTTGACTCAGAATTGTTTGCCGAA...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGGACTCACTGGGCAGTaGCTCACAGCTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWGLTGQ*LTAGLG
Trigger: TCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATCCACAGAAAGTAAAGTaGGGCTGGAAGCGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHPQKVK*GWKRLC
Trigger: GCAAAGACGCTTCCAGCCTCACTTTACTTTCTGTGG...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCTCCTACACACGAAATaGAGCCCAAATCAAACATCA +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSLLHTK*SPNQTS
Trigger: TGATGTTTGATTTGGGCTTCATTTCGTGTGTAGGAG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGGCCCGTCTCTGAGTTaGACAGGGTTGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNGPSLS*TGLSPP
Trigger: TGGTGGACTCAACCCTGTTCAACTCAGAGACGGGCC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTCTGGGGCGGTGGCTaGATGACTGAACCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWVWGGG*MTEPLH
Trigger: GTGCAAGGGTTCAGTCATGCAGCCACCGCCCCAGAC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACTGGCACACAGCACCATaGCTGGGCACAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHWHTAP*LGTAGP
Trigger: TGGGCCAGCTGTGCCCAGGCATGGTGCTGTGTGCCA...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAGCCTTCCGTGGCTTCTaGTGCTATAGCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRAFRGF*CYSWMT
Trigger: TGTCATCCAGCTATAGCAGCAGAAGCCACGGAAGGC...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGGGCGGCAGCTGGTCTaGACTGCTTCTGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAGRQLV*TASGGH
Trigger: GTGTCCGCCAGAAGCAGTGCAGACCAGCTGCCGCCC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGGCGGTGCCCCTGCGTaGGGAAGCATGTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLGGAPA*GSMCTA
Trigger: AGCTGTGCACATGCTTCCGCACGCAGGGGCACCGCC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCAAGGGCGGTGCCCCTaGGTGCGGAAGCATGTGCAC +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLQGRCP*VRKHVH
Trigger: GTGCACATGCTTCCGCACGCAGGGGCACCGCCCTTG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACAAGGGCGGTGCCCCTaGGTGCGGAAGCATGTGCAC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEQGRCP*VRKHVH
Trigger: GTGCACATGCTTCCGCACGCAGGGGCACCGCCCTTG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCCATCAGGCACCAGGGTaGCGTGTGCAGGTGGAACTA +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVHQAPG*RVQVEL
Trigger: TAGTTCCACCTGCACACGGCACCCTGGTGCCTGATG...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTTGGGCCGGGGGCAAGTaGAGGCACTGGCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASWAGGK*RHWLWP
Trigger: TGGCCACAGCCAGTGCCTGCACTTGCCCCCGGCCCA...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCCCTTCAGGATATCCTTaGCTGGGAGGTGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVPSGYP*LGGGRS
Trigger: GGAACGGCCACCTCCCAGGCAAGGATATCCTGAAGG...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGCAGCAAGGCCTCCATaGTGTGGACCTCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWAARPP*CGPPPR
Trigger: CCTTGGTGGAGGTCCACAGCATGGAGGCCTTGCTGC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACGCCCGCATCTCCTCCTaGTCAGACGTGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHARISS*SDVCCS
Trigger: GCTGCAGCACACGTCTGAGCAGGAGGAGATGCGGGC...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGAAATCAATCAGGTTTaGTTCATTGGGCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGEINQV*FIGRLP
Trigger: GGGAAGTCGCCCAATGAAGCAAACCTGATTGATTTC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGAAATCAATCAGGTTTaGTTCATTGGGCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSAREINQV*FIGRLP
Trigger: GGGAAGTCGCCCAATGAAGCAAACCTGATTGATTTC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCTTCCACCTGCTCCACTaGCTCATTCGTGAAATCAAT +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVFHLLH*LIREIN
Trigger: ATTGATTTCACGAATGAGGCAGTGGAGCAGGTGGAA...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACTTCCACCTGCTCCACTaGCTCATTCGTGAAATCAAT +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADFHLLH*LIREIN
Trigger: ATTGATTTCACGAATGAGGCAGTGGAGCAGGTGGAA...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCAGGCCATTCTTCATTaGAGACTCCAAAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLQAILH*RLQSIL
Trigger: AAGGATGCTTTGGAGTCTGCAATGAAGAATGGCCTG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACGCGGCTGCGTCAGGATaGTCTTCGCGATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHAAASG*SSRWPH
Trigger: GTGAGGCCATCGCGAAGAGCATCCTGACGCAGCCGC...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTACGCTCGGGCTCGAGTaGTCAGGGCTCGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASTLGLE*SGLGAG
Trigger: GCCTGCACCGAGCCCTGAGCACTCGAGCCCGAGCGT...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCACGCTCGGGCTCGAGTaGTCAGGGCTCGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSTLGLE*SGLGAG
Trigger: GCCTGCACCGAGCCCTGAGCACTCGAGCCCGAGCGT...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTCCGTCAGGGAGCGTCTaGGGAGCTGAGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASPSGSV*GAEGSS
Trigger: GCTGCTGCCCTCAGCTCCGCAGACGCTCCCTGACGG...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCCCGTCAGGGAGCGTCTaGGGAGCTGAGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSPSGSV*GAEGSS
Trigger: GCTGCTGCCCTCAGCTCCGCAGACGCTCCCTGACGG...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACAGAGACAGAGGTGGCTaGGTGGGACCCGAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHRDRGG*VGPESA
Trigger: TGCCGACTCGGGTCCCACGCAGCCACCTCTGTCTCT...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGAGCTCTGGTTCCTGCTaGTCTTCTAGAGTACATGTT +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGSSGSC*SSRVHV
Trigger: AACATGTACTCTAGAAGAGCAGCAGGAACCAGAGCT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACAGCTCTGGTTCCTGCTaGTCTTCTAGAGTACATGTT +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADSSGSC*SSRVHV
Trigger: AACATGTACTCTAGAAGAGCAGCAGGAACCAGAGCT...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATCAGTCACCCTCTCTTTaGTCCCAGCACCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHQSPSL*SQHLKG
Trigger: TCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGACTG...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGCAGGGGTTGGGGTCTaGCTCAGTCACCCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNAGVGV*LSHPLF
Trigger: AAAGAGAGGGTGACTGAGGCAGACCCCAACCCCTGC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGGCTGGAAGCGTCTTTaGAACAGGAAAGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVGWKRL*NRKEIH
Trigger: GTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGCC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGGCTGGAAGCGTCTTTaGAACAGGAAAGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARGWKRL*NRKEIH
Trigger: GTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGCC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTGGCTGGAAGCGTCTTTaGAACAGGAAAGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGGWKRL*NRKEIH
Trigger: GTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGCC...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGGAAGCCTTAAAGCTTTaGATCAGTGAGAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQEALKL*ISERRP
Trigger: GGGCCTCCTCTCACTGATGCAAAGCTTTAAGGCTTC...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTTCGCCCTGTTTACGCTaGCTCTTTCTCCCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETASPCLR*LFLPVF
Trigger: AAAGACTGGGAGAAAGAGCCAGCGTAAACAGGGCGA...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290037.10
CDS-3UTR CCA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACATTCAGGATCCACTCCTaGAATGTAGTGAGGAAGATA +
Preference number: 4 (lower is better)
Translates to: LLPSDWATRWAVPSALGTFRIHS*NVVRKI
Trigger: TATCTTCCTCACTACATTCCAGGAGTGGATCCTGAA...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGCGTACGGTTTTCTaGGCTATCTCCCCGGGCGAG +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWVRTVF*AISPGE
Trigger: CTCGCCCGGGGAGATAGCCCAGAAAACCGTACGCAC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGCACTGTATGCAGTGTaGCATCAGGGGCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNALYAV*HQGLRC
Trigger: ACACCGGAGCCCCTGATGCCACACTGCATACAGTGC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCCTCCATGTTGTCTGGTaGCTGCTCCAGGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVLHVVW*LLQVAR
Trigger: CCTGGCAACCTGGAGCAGCCACCAGACAACATGGAG...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGATTGTCTGGGATGACTaGCAACACTTTGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLIVWDD*QHFAEK
Trigger: CTTCTCAGCAAAGTGTTGCCAGTCATCCCAGACAAT...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGACAGCTCCGAAAACATaGCTTTGGGTAGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQTAPKT*LWVVVG
Trigger: CCCCACAACTACCCAAAGCCATGTTTTCGGAGCTGT...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGACTGTGCTGAGTTCTaGGCCTGTCCCTGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPDCAEF*ACPCAG
Trigger: GCCCGCACAGGGACAGGCCCAGAACTCAGCACAGTC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTGTTCCGAGGAGTGGCTaGCTCGGGAGCTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASVPRSG*LGSWAA
Trigger: AGCGGCCCAGCTCCCGAGCCAGCCACTCCTCGGAAC...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCGTTCCGAGGAGTGGCTaGCTCGGGAGCTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSVPRSG*LGSWAA
Trigger: AGCGGCCCAGCTCCCGAGCCAGCCACTCCTCGGAAC...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGCCGAGTGCTCGCTGTaGACGCTGCGCCGGTCCACC +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAAECSL*TLRRST
Trigger: GGTGGACCGGCGCAGCGTCCACAGCGAGCACTCGGC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGAGGGTAGCCATACTCTaGGAAGCCGGGGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWRVAIL*EAGATA
Trigger: AGCAGTGGCCCCGGCTTCCCAGAGTATGGCTACCCT...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGATGACATCCACCTTATaGGTGTCGTCTTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQMTSTL*VSSLAR
Trigger: CCTGGCCAAAGACGACACCCATAAGGTGGATGTCAT...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGTGAGGAAAGAGAGCTaGGCCTCACCAGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNVRKES*ASPDSS
Trigger: GGAGGAGTCTGGTGAGGCCCAGCTCTCTTTCCTCAC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCCTCTCTCGAGCGAGCTaGCGGCAGCCGCCGGACCAC +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKALSRAS*RQPPDH
Trigger: GTGGTCCGGCGGCTGCCGCCAGCTCGCTCGAGAGAG...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTCGTCTCCACAGCACGTaGACGCGGCAGGCATCCGTC +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAARLHST*TRQASV
Trigger: GACGGATGCCTGCCGCGTCCACGTGCTGTGGAGACG...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTCGTCTCCACAGCACGTaGACGCGGCAGGCATCCGTC +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFRLHST*TRQASV
Trigger: GACGGATGCCTGCCGCGTCCACGTGCTGTGGAGACG...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCGTCTCCACAGCACGTaGACGCGGCAGGCATCCGTC +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLRLHST*TRQASV
Trigger: GACGGATGCCTGCCGCGTCCACGTGCTGTGGAGACG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACTGTTGTTGTTCAAGTTaGACAAGACCATGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADCCCSS*TRPWRG
Trigger: ACCTCGCCATGGTCTTGTCCAACTTGAACAACAACA...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGGGCTTCTCTTTCAGCTaGGGATCGAAGAGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQGFSFS*GSKSRN
Trigger: GTTACGACTCTTCGATCCCCAGCTGAAAGAGAAGCC...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACAAGGACTCCTCTTCTaGCTTCTCTTTCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRQGLLF*LLFQLG
Trigger: CCCCAGCTGAAAGAGAAGCCAGAAGAGGAGTCCTTG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTCCGCCAGCAGAGGGTTaGCGATCCCCAGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASPPAEG*RSPGLL
Trigger: CAGGAGCCCTGGGGATCGCCAACCCTCTGCTGGCGG...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCGGGCTCCTGGCTTCCTaGAGCAAGTGTCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVGLLAS*SKCLLS
Trigger: GGAAAGGAGACACTTGCTCCAGGAAGCCAGGAGCCC...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCCGTCCCGAACGTCCCTaGGGTCTCACTGAAGACACT +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVRPERP*GLTEDT
Trigger: AGTGTCTTCAGTGAGACCCCAGGGACGTTCGGGACG...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313084.9
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAATTGAGCTCCCGGAGGTaGCGCAGGCCTGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHELSSRR*RRPVPA
Trigger: AGCTGGCACAGGCCTGCGCCACCTCCGGGAGCTCAA...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTTTGAGCTCCCGGAGGTaGCGCAGGCCTGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAALSSRR*RRPVPA
Trigger: AGCTGGCACAGGCCTGCGCCACCTCCGGGAGCTCAA...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGGCTTGGAGAGGCCCTaGTTACTACCGACCATGTGG +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNGLERP*LLPTMW
Trigger: CCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACGTGCAGAGCAGGGGTTaGGGTCTGCCTCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHVQSRG*GLPQSP
Trigger: GGGTGACTGAGGCAGACCCCAACCCCTGCTCTGCAC...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCCGGCGAGGGCCCAGATaGTGCAGAGCAGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSRRGPR*CRAGVG
Trigger: CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCG...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGCAGTCCCCAGCGCTTTaGGTACACAAAATCACCCAT +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQQSPAL*VHKITH
Trigger: ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTG...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGACTGGGCCACACGGTaGGCAGTCCCCAGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEDWATR*AVPSAL
Trigger: CAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCCTCCTTCCCAGTGACTaGGCCACACGGTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPLLPSD*ATRWAV
Trigger: GACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGTCAGTTTTCAACCTaGATGACCACCCTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQGQFST*MTTLSH
Trigger: ATGGCTCAGGGTGGTCATCCAGGTTGAAAACTGACC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGAGAAAGTGGGTCATGTaGATTGTACCACGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQRKWVM*IVPRKV
Trigger: CACTTTTCGTGGTACAATCCACATGACCCACTTTCT...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTGGAAAACATCCTGGGTaGTCTGGGCTAAATGATCAA +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGGKHPG*SGLNDQ
Trigger: TTGATCATTTAGCCCAGACCACCCAGGATGTTTTCC...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGGAAAACATCCTGGGTaGTCTGGGCTAAATGATCAA +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGGKHPG*SGLNDQ
Trigger: TTGATCATTTAGCCCAGACCACCCAGGATGTTTTCC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGGGGCGGTGGCTGCATaGCTGAACCCTTGCACAAGT +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPGAVAA*LNPCTS
Trigger: ACTTGTGCAAGGGTTCAGTCATGCAGCCACCGCCCC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR TCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGCAACTTCTTGCTGAATaGATGTGCCAACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQQLLAE*MCQPAP
Trigger: AGGAGCTGGTTGGCACATTCATTCAGCAAGAAGTTG...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCAACTTCTTGCTGAATaGATGTGCCAACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAQLLAE*MCQPAP
Trigger: AGGAGCTGGTTGGCACATTCATTCAGCAAGAAGTTG...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTTTACCCCAACTAAGTaGGATTTTACCGGTTCGAAA +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSFTPTK*DFTGSK
Trigger: TTTCGAACCGGTAAAATCTCACTTAGTTGGGGTAAA...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCCGAGCTTGGGTTCCGTaGCTGCTGCCCGGACATCGC +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSRAWVP*LLPGHR
Trigger: GCGATGTCCGGGCAGCAGTCACGGAACCCAAGCTCG...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAAGCAAATTAGCAGGCTaGTTAGAAACCATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSSKLAG*LETISE
Trigger: TTCCGAAATGGTTTCTAATCAGCCTGCTAATTTGCT...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCGGCTGGGATGGTGGTTaGACCAGCAAATTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVGWDGG*TSKLAG
Trigger: GCCTGCTAATTTGCTGGTTCAACCACCATCCCAGCC...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCAGACTTTCTGGATTTaGCAGCTCCGAAAACATGGC +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAQTFWI*QLRKHG
Trigger: GCCATGTTTTCGGAGCTGTCAAATCCAGAAAGTCTG...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGCGTCAAAACTCCCCGTaGAGCGAGGATCGTACCTCC +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWRQNSP*SEDRTS
Trigger: GGAGGTACGATCCTCGCTTCACGGGGAGTTTTGACG...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAAGCCGGGGCCACTGCTaGAATTGCTGCGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHESRGHC*NCCGRC
Trigger: GCACCTACCGCAGCAATTTCAGCAGTGGCCCCGGCT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCACAGACATGAGGCACTaGAAATTTTTCAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSATDMRH*KFFRRS
Trigger: ACTTCTCCTGAAAAATTTTCAGTGCCTCATGTCTGT...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGATCCAAGAGGCCCCTTaGAGCCAGAGTGTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWIQEAP*SQSVAH
Trigger: ATGGGCGACACTCTGGCTTCAAGGGGCCTCTTGGAT...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGTCTGCACAAGCTGGCTaGTCAACACCGGGGAATACA +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAESAQAG*STPGNT
Trigger: TGTATTCCCCGGTGTTGATCAGCCAGCTTGTGCAGA...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGGACTCACTGGGCAGTaGCTCACAGCTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPGLTGQ*LTAGLG
Trigger: TCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACGGACTCACTGGGCAGTaGCTCACAGCTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHGLTGQ*LTAGLG
Trigger: TCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCC...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACTCGGAGGCGCTGATTaGGAACACAGCGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHELGGAD*EHSALH
Trigger: GTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGCTCCTACACACGAAATaGAGCCCAAATCAAACATCA +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGLLHTK*SPNQTS
Trigger: TGATGTTTGATTTGGGCTTCATTTCGTGTGTAGGAG...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGCTCCTACACACGAAATaGAGCCCAAATCAAACATCA +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARLLHTK*SPNQTS
Trigger: TGATGTTTGATTTGGGCTTCATTTCGTGTGTAGGAG...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCAGTGCTACCAACCTCTaGACCAACGTCCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPSATNL*TNVPQG
Trigger: CCCCTGGGGGACGTTGGTTCAGAGGTTGGTAGCACT...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGTGGCCTTTCTCCAAGTaGCAAGGACAAATGGATCCA +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQWPFSK*QGQMDP
Trigger: TGGATCCATTTGTCCTTGTCACTTGGAGAAAGGCCA...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGCTGGAGGAAGCTTCTTaGATCAAAAGTCGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQLEEAS*IKSRGS
Trigger: ACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAG...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGCTTTTGGACGAACTaGCCAGTGGTGTACTTTGGA +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQCFWTN*PVVYFG
Trigger: TCCAAAGTACACCACTGGGCAGTTCGTCCAAAAGCA...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGCGGGGGCTGGGCCTTaGAAGACAGGTGGACTGCTT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEAGAGP*KTGGLL
Trigger: AAGCAGTCCACCTGTCTTGCAAGGCCCAGCCCCCGC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTTCACTCCTGGATTCTaGCTGAGCTCTGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVFTPGF*LSSGLA
Trigger: GGCAAGCCCAGAGCTCAGGCAGAATCCAGGAGTGAA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTCATCCGGCACCCCTGTaGTCGCTGTGTCACCCCACA +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAHPAPL*SLCHPT
Trigger: TGTGGGGTGACACAGCGAGCACAGGGGTGCCGGATG...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGCGTGCGGAAGCATGTaGACAGCTTCCGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPACGSM*TASVVE
Trigger: CTCCACCACGGAAGCTGTGCACATGCTTCCGCACGC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTCTGGCAGCTCACTTTaGGCCCACAGAGTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVSGSSL*AHRVVA
Trigger: AGCAACGACTCTGTGGGCGCAAAGTGAGCTGCCAGA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTGGGAAGAGCACTTCCTaGCTTACGATCCTTTTGACT +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAGKSTS*LTILLT
Trigger: AGTCAAAAGGATCGTAAGGCAGGAAGTGCTCTTCCC...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGTGCTCTCTCCTGTATaGGTCATACTCTGCATCACA +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQVLSPV*VILCIT
Trigger: TGTGATGCAGAGTATGACGCATACAGGAGAGAGCAC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCAGGCTCCGTGCCGAGTaGTCGCTGTGGACGCTGCGC +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKARLRAE*SLWTLR
Trigger: GCGCAGCGTCCACAGCGAGCACTCGGCACGGAGCCT...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGTGCTCAGACGTGTGCTaGAGCAAGGCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWCSDVC*SKASML
Trigger: CAGCATGGAGGCCTTGCTGCAGCACACGTCTGAGCA...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGTTCCGTCCTCTGGATTaGTTCGTTGGTTGCGAACTT +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQFRPLD*FVGCEL
Trigger: AAGTTCGCAACCAACGAAGCAATCCAGAGGACGGAA...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGCGGCTGCGTCAGGATaGTCTTCGCGATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAAAASG*SSRWPH
Trigger: GTGAGGCCATCGCGAAGAGCATCCTGACGCAGCCGC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGTGCTCAGGGCTCGGTaGAGGCACCGCCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAVLRAR*RHRQQR
Trigger: CCTCTGCTGGCGGTGCCTGCACCGAGCCCTGAGCAC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTAGAGACAGAGGTGGCTaGGTGGGACCCGAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAARDRGG*VGPESA
Trigger: TGCCGACTCGGGTCCCACGCAGCCACCTCTGTCTCT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACGTTTCTTTCTTGGCTaGCTGTCCGGGTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRRFFLG*LSGSLC
Trigger: ACAAAGAGACCCGGACAGGCAGCCAAGAAAGAAACG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGCAGGCGGGGCAGCTTaGACAGTCTTGGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEAGGAA*TVLGIE
Trigger: CTCGATGCCCAAGACTGTGCAAGCTGCCCCGCCTGC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACTGCAGGCCCTTCCCTaGCAGTCCCGTCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHELQALP*QSRLEA
Trigger: AGCTTCCAGACGGGACTGGCAGGGAAGGGCCTGCAG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCCAGCTCTGAGTCACTaGTGTGTCTCCCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLPALSH*CVSLGA
Trigger: CGCCCCCAGGGAGACACAGCAGTGACTCAGAGCTGG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCCAGTGGTGTACTTTaGAGCGCCTGTCTACTAAAA +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAPSGVL*SACLLK
Trigger: TTTTAGTAGACAGGCGCTCCAAAGTACACCACTGGG...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACGGAAGGGGATGCTGCTaGGGTGACCACACCGTCATG +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHGRGCC*GDHTVM
Trigger: CATGACGGTGTGGTCACCCCAGCAGCATCCCCTTCC...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTTGGCCCCCACTGTCCTaGCATCTGCAGACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFWPPLS*HLQTRL
Trigger: CAGCCTGGTCTGCAGATGCCAGGACAGTGGGGGCCA...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAAATGAGGAACGCTGGTaGCACAGGGCACCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQNEERW*HRAPRW
Trigger: CCAGCGGGGTGCCCTGTGCCACCAGCGTTCCTCATT...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTAATGAGGAACGCTGGTaGCACAGGGCACCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFNEERW*HRAPRW
Trigger: CCAGCGGGGTGCCCTGTGCCACCAGCGTTCCTCATT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTAATGAGGAACGCTGGTaGCACAGGGCACCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAANEERW*HRAPRW
Trigger: CCAGCGGGGTGCCCTGTGCCACCAGCGTTCCTCATT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAGAGTTATTGGCCAGGTaGCTTCCACTTTGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRELLAR*LPLCKW
Trigger: CCACTTGCAAAGTGGAAGCCACCTGGCCAATAACTC...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACTCATTGCTGGGGCCTaGGAGAAGGGCCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHELIAGA*EKGLAE
Trigger: CTCTGCCAGGCCCTTCTCCCAGGCCCCAGCAATGAG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTAATTCTGGCTCACAGTaGTCTCGTCTGTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETANSGSQ*SRLFHL
Trigger: GAGGTGAAACAGACGAGACCACTGTGAGCCAGAATT...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTCACTTCACGGGCCCCTaGGTCCTGGCTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASHFTGP*VLAEGL
Trigger: GAGGCCTTCAGCCAGGACCCAGGGGCCCGTGAAGTG...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGCCTCCTCTCCCATTTTaGGAGGATTCTCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQPPLPF*EDSQGS
Trigger: AGAACCTTGAGAATCCTCCCAAAATGGGAGAGGAGG...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTAACTGGCTGGGATGGTaGTTGAACCAGCAAATTAGC +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETANWLGW*LNQQIS
Trigger: GCTAATTTGCTGGTTCAACCACCATCCCAGCCAGTT...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTGTCTTCCTGATGACTaGAATGGTTTGCCTTATTAC +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSACLPDD*NGLPYY
Trigger: GTAATAAGGCAAACCATTCCAGTCATCAGGAAGACA...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACAGGCCCAGATTGTCTaGGATGACTGGCAACACTTT +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRQAQIV*DDWQHF
Trigger: AAAGTGTTGCCAGTCATCCCAGACAATCTGGGCCTG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGACTGTGCTGAGTTCTaGGCCTGTCCCTGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFDCAEF*ACPCAG
Trigger: GCCCGCACAGGGACAGGCCCAGAACTCAGCACAGTC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGCCGTGAAAGGAGCCTaGAGGAAGCGGGGCCTCGTA +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFAVKGA*RKRGLV
Trigger: TACGAGGCCCCGCTTCCTCCAGGCTCCTTTCACGGC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGATGGCAAACTGTGATTaGATCCGATTAAGACAAGCT +
Preference number: 4 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTMANCD*IRLRQA
Trigger: AGCTTGTCTTAATCGGATCCAATCACAGTTTGCCAT...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAATGGCAAACTGTGATTaGATCCGATTAAGACAAGCT +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSMANCD*IRLRQA
Trigger: AGCTTGTCTTAATCGGATCCAATCACAGTTTGCCAT...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCATCTGGATTGCTTCGTTaGTTGCGAACTTTAAGAATG +
Preference number: 4 (lower is better)
Translates to: EVPGFTRADRGTERAAPSSGLLR*LRTLRM
Trigger: CATTCTTAAAGTTCGCAACCAACGAAGCAATCCAGA...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATATGAACTTAAACACCTaGAAACTAGGCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHMNLNT*KLGRGQ
Trigger: CTGCCCCCTGCCTAGTTTCCAGGTGTTTAAGTTCAT...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCAAGGACTCCTCTTCTaGCTTCTCTTTCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEQGLLF*LLFQLG
Trigger: CCCCAGCTGAAAGAGAAGCCAGAAGAGGAGTCCTTG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCGGCAGGACTGGCCAATaGGCCGTCAGGGAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSGRTGQ*AVRERL
Trigger: CAGACGCTCCCTGACGGCCCATTGGCCAGTCCTGCC...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGCACTCTGGCAGGACTaGCCAATGGGCCGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQALWQD*PMGRQG
Trigger: TCCCTGACGGCCCATTGGCCAGTCCTGCCAGAGTGC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCCACTATCCCTGGGTCTaGGCTCCTGGCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPHYPWV*APGFLE
Trigger: CTCCAGGAAGCCAGGAGCCCAGACCCAGGGATAGTG...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAACAGAGGTGGCTGCGTaGGACCCGAGTCGGCACGAT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHETEVAA*DPSRHD
Trigger: ATCGTGCCGACTCGGGTCCCACGCAGCCACCTCTGT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCCATCGAGGTTGGAGGTaGGGGCGGGGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPHRGWR*GRGFLL
Trigger: GAGAAGAAAGCCCCGCCCCCACCTCCAACCTCGATG...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTCTTGGGCATCGAGGTTaGAGGTGGGGGCGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFLGHRG*RWGRGF
Trigger: AAAGCCCCGCCCCCACCTCCAACCTCGATGCCCAAG...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCAAGTTAGAAGGAATTaGGAGTGGCGCGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEQVRRN*EWREWS
Trigger: GCTCCACTCGCGCCACTCCCAATTCCTTCTAACTTG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGCCTGCCAGTCCCGTCTaGAAGCTGTGGTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWPASPV*KLWFFC
Trigger: GCAGAAGAACCACAGCTTCCAGACGGGACTGGCAGG...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTAGGGCATGGCCCCGCTaGGAGGGCCCCCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSRAWPR*EGPLQQ
Trigger: CTGCTGCAGGGGGCCCTCCCAGCGGGGCCATGCCCT...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATACCAGGTGCTTCCTCTaGCCAATCCTCCCTAGCCTT +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNTRCFL*PILPSL
Trigger: AAGGCTAGGGAGGATTGGCCAGAGGAAGCACCTGGT...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGCATGTGGCTCTCCTGTaGCAGAGACAGCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWHVALL*QRQLRL
Trigger: AAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATG...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCCGGCGAGGGCCCAGATaGTGCAGAGCAGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKARRGPR*CRAGVG
Trigger: CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCG...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGAGAAAGTGGGTCATGTaGATTGTACCACGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGRKWVM*IVPRKV
Trigger: CACTTTTCGTGGTACAATCCACATGACCCACTTTCT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAAGAAAGTGGGTCATGTaGATTGTACCACGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATRKWVM*IVPRKV
Trigger: CACTTTTCGTGGTACAATCCACATGACCCACTTTCT...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGCTCAAAGTCTCAGTGTaGCAAAACTCGGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQLKVSV*QNSGQK
Trigger: TTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAG...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTTTCTGCATCTGGGGTTaGCACGAACAAGTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAFCIWG*HEQVRR
Trigger: CCTTCTAACTTGTTCGTGCCAACCCCAGATGCAGAA...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTTCTGCATCTGGGGTTaGCACGAACAAGTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQFCIWG*HEQVRR
Trigger: CCTTCTAACTTGTTCGTGCCAACCCCAGATGCAGAA...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATCCCGTCTGGAAGCTGTaGTTCTTCTGCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNPVWKL*FFCIWG
Trigger: ACCCCAGATGCAGAAGAACCACAGCTTCCAGACGGG...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGAAGGGGCCCATATCTaGACTGGTCACTCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFEGAHI*TGHSGR
Trigger: CCTCCCCGAGTGACCAGTTCAGATATGGGCCCCTTC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACTTTACCCCAACTAAGTaGGATTTTACCGGTTCGAAA +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADFTPTK*DFTGSK
Trigger: TTTCGAACCGGTAAAATCTCACTTAGTTGGGGTAAA...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGACAGACATGAGGCACTaGAAATTTTTCAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGTDMRH*KFFRRS
Trigger: ACTTCTCCTGAAAAATTTTCAGTGCCTCATGTCTGT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGGCCGGCTGTCCTTCTaGAGGCAGATTGGGAATCAC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPGRLSF*RQIGNH
Trigger: GTGATTCCCAATCTGCCTTCAGAAGGACAGCCGGCC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGCCACTGCCTCATTCGTaGAATCAATCAGGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQPLPHS*NQSGLL
Trigger: AAGCAAACCTGATTGATTTCACGAATGAGGCAGTGG...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACGCAAGTAGCAGAGCGTaGCCCCACAGGCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHASSRA*PHRPFF
Trigger: GAAGAATGGCCTGTGGGGTCACGCTCTGCTACTTGC...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGCAAGTAGCAGAGCGTaGCCCCACAGGCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPASSRA*PHRPFF
Trigger: GAAGAATGGCCTGTGGGGTCACGCTCTGCTACTTGC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGAAGAATGGCAAACTGTaGTTGGATCCGATTAAGACA +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARKNGKL*LDPIKT
Trigger: TGTCTTAATCGGATCCAATCACAGTTTGCCATTCTT...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCAAGAATGGCAAACTGTaGTTGGATCCGATTAAGACA +
Preference number: 4 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGKNGKL*LDPIKT
Trigger: TGTCTTAATCGGATCCAATCACAGTTTGCCATTCTT...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGTGTGCGACCAGCTCTaGGTCACTGCTGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLVCDQL*VTAVSP
Trigger: GGGAGACACAGCAGTGACTCAGAGCTGGTCGCACAC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTGTGCGACCAGCTCTaGGTCACTGCTGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAVCDQL*VTAVSP
Trigger: GGGAGACACAGCAGTGACTCAGAGCTGGTCGCACAC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTTCGGCAAACAATTCTaGGTCAAAGATTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSFGKQF*VKDSVF
Trigger: AAAGACTGAATCTTTGACTCAGAATTGTTTGCCGAA...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGGACTCACTGGGCAGTaGCTCACAGCTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAGLTGQ*LTAGLG
Trigger: TCCAAGCCCAGCTGTGAGTCACTGCCCAGTGAGTCC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGGATCCGTGACCGGCTaGAACGGGCAAGTTGTCGGA +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLGSVTG*NGQVVG
Trigger: TCCGACAACTTGCCCGTTGCAGCCGGTCACGGATCC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGGATCCGTGACCGGCTaGAACGGGCAAGTTGTCGGA +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQGSVTG*NGQVVG
Trigger: TCCGACAACTTGCCCGTTGCAGCCGGTCACGGATCC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCGCAAGACAGGTGGACTaGTTTTGGACGAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVARQVD*FWTNCP
Trigger: TGGGCAGTTCGTCCAAAAGCAGTCCACCTGTCTTGC...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAACCGTCATGTGGGTTTTaGCTGCTCAGGGGTCGGTCG +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQPSCGF*LLRGRS
Trigger: CGACCGACCCCTGAGCAGGCAAAACCCACATGACGG...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGCAGAGGCGGGCCGGTaGTCATTCTTCACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEAEAGR*SFFTPG
Trigger: TCCAGGAGTGAAGAATGAGCACCGGCCCGCCTCTGC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGCAGAGGCGGGCCGGTaGTCATTCTTCACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFAEAGR*SFFTPG
Trigger: TCCAGGAGTGAAGAATGAGCACCGGCCCGCCTCTGC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGCCCCCAGTGGGTGGTaGGTACGGTTTTCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLAPSGW*VRFSGL
Trigger: TAGCCCAGAAAACCGTACGCACCACCCACTGGGGGC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGTCAGGGTGCACTGTATaGAGTGTGGCATCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWSGCTV*SVASGA
Trigger: AGCCCCTGATGCCACACTGCATACAGTGCACCCTGA...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTGTGGCTGCTCCAGGTTaGCAGGGGAAGCATCGGGCA +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASVAAPG*QGKHRA
Trigger: TGCCCGATGCTTCCCCTGGCAACCTGGAGCAGCCAC...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCGTGGCTGCTCCAGGTTaGCAGGGGAAGCATCGGGCA +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSVAAPG*QGKHRA
Trigger: TGCCCGATGCTTCCCCTGGCAACCTGGAGCAGCCAC...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGAGGCCTCTTCTCGGGTaGTGGATACACAGTATCCAA +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAERPLLG*WIHSIQ
Trigger: TTGGATACTGTGTATCCAGCACCCGAGAAGAGGCCT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGGGCCAGAAGGACGTTaGCTCCAAAATCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWGPEGR*LQNLAA
Trigger: AGCTGCCAGATTTTGGAGGCAACGTCCTTCTGGCCC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGGGTTCCGTGACTGCTaGCCGGACATCGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAGFRDC*PDIASS
Trigger: AGAAGAGGCGATGTCCGGGCAGCAGTCACGGAACCC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGTAATAGAGGGAGGCTaGGCCAGGCTCCGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQVIEGG*ARLRWV
Trigger: TACCCACCGGAGCCTGGCGCAGCCTCCCTCTATTAC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGTCCCCGAAGGCAGAGTaGTCTCTCCTGTATGCGTCA +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWSPKAE*SLLYAS
Trigger: TGACGCATACAGGAGAGAGCACTCTGCCTTCGGGGA...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACTCCTGCTCAGACGTGTaGTGCAGCAAGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHSCSDV*CSKASM
Trigger: CATGGAGGCCTTGCTGCAGCACACGTCTGAGCAGGA...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAACCGGGGAATACAGGTaGGGCTGCGTCAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHETGEYR*GCVRML
Trigger: GAGCATCCTGACGCAGCCGCACCTGTATTCCCCGGT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAAACCAGCCACGTGGGTaGGGCCAAGGACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHENQPRG*GQGLLF
Trigger: GAAGAGGAGTCCTTGGCCGCACCCACGTGGCTGGTT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCGCAGGCGGGGCAGCTTaGACAGTCTTGGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSAGGAA*TVLGIE
Trigger: CTCGATGCCCAAGACTGTGCAAGCTGCCCCGCCTGC...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATAGCTCTGGTTCCTGCTaGTCTTCTAGAGTACATGTT +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHSSGSC*SSRVHV
Trigger: AACATGTACTCTAGAAGAGCAGCAGGAACCAGAGCT...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTCCAGCTCTGAGTCACTaGTGTGTCTCCCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASPALSH*CVSLGA
Trigger: CGCCCCCAGGGAGACACAGCAGTGACTCAGAGCTGG...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTGGCTGGAAGCGTCTTTaGAACAGGAAAGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAGWKRL*NRKEIH
Trigger: GTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGCC...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACACTAAGTTCCAGAGCTaGTGTCAAGAAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADTKFQS*CQETVL
Trigger: TAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGT...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGACTAAGTTCCAGAGCTaGTGTCAAGAAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARTKFQS*CQETVL
Trigger: TAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGT...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCCCAGCCCCCAGTGGGTaGTGCGTACGGTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSPAPSG*CVRFSG
Trigger: CCCAGAAAACCGTACGCACCACCCACTGGGGGCTGG...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGGCCTAGCCCAGGGCTaGAGCAGAAATCGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWGLAQG*SRNRQS
Trigger: ACTTTGACGATTTCTGCTCCAGCCCTGGGCTAGGCC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGGTCTGCACTGCTTCTaGCGGACACAGGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPGLHCF*RTQVSL
Trigger: AAGGGAGACCTGTGTCCGCCAGAAGCAGTGCAGACC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACTGAGCAATCAAGACTaGAGGATTCTGCAGAGACTC +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRLSNQD*RILQRL
Trigger: GAGTCTCTGCAGAATCCTCCAGTCTTGATTGCTCAG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGATTGTCTGGGATGACTaGCAACACTTTGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQIVWDD*QHFAEK
Trigger: CTTCTCAGCAAAGTGTTGCCAGTCATCCCAGACAAT...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGAAAACATGGCTTTaGGTAGTTGTGGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEPKTWL*VVVGEK
Trigger: CTTCTCCCCCACAACTACCCAAAGCCATGTTTTCGG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTTCCTTGCCTGGGAGGTaGCCGTTCCGAGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASSLPGR*PFRGVA
Trigger: AGCCACTCCTCGGAACGGCCACCTCCCAGGCAAGGA...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTAGGGTAGCCATACTCTaGGAAGCCGGGGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAARVAIL*EAGATA
Trigger: AGCAGTGGCCCCGGCTTCCCAGAGTATGGCTACCCT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAAGGGTAGCCATACTCTaGGAAGCCGGGGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQRVAIL*EAGATA
Trigger: AGCAGTGGCCCCGGCTTCCCAGAGTATGGCTACCCT...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGATGAAACTTGCTCCATaGCAGGCCAGACGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWMKLAP*QARRCR
Trigger: CCGACACCGTCTGGCCTGCCATGGAGCAAGTTTCAT...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTTATGGGTGTCGTCTTTaGCCAGGGGTCCCGGGAACG +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAYGCRL*PGVPGT
Trigger: CGTTCCCGGGACCCCTGGCCAAAGACGACACCCATA...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGAGCCACACTGTTCTGTaGTCTCGTAACAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAESHTVL*SRNRSS
Trigger: GGAGCTTCTGTTACGAGACCACAGAACAGTGTGGCT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTATGGCAAACTGTGATTaGATCCGATTAAGACAAGCT +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGMANCD*IRLRQA
Trigger: AGCTTGTCTTAATCGGATCCAATCACAGTTTGCCAT...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTAGTGGAAGGCTTGCGTaGCCAGCCCCATTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFSGRLA*PAPFPP
Trigger: TGGCGGAAATGGGGCTGGCCACGCAAGCCTTCCACT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAAGTGGAAGGCTTGCGTaGCCAGCCCCATTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHESGRLA*PAPFPP
Trigger: TGGCGGAAATGGGGCTGGCCACGCAAGCCTTCCACT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCGCACTCTGGCAGGACTaGCCAATGGGCCGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSALWQD*PMGRQG
Trigger: TCCCTGACGGCCCATTGGCCAGTCCTGCCAGAGTGC...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGGAACATCGGCACTCTaGCAGGACTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFGTSAL*QDWPMG
Trigger: GCCCATTGGCCAGTCCTGCCAGAGTGCCGATGTTCC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCTGGGTCTGGGCTCCTaGCTTCCTGGAGCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLLGLGS*LPGASV
Trigger: GACACTTGCTCCAGGAAGCCAGGAGCCCAGACCCAG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTCACTATCCCTGGGTCTaGGCTCCTGGCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAHYPWV*APGFLE
Trigger: CTCCAGGAAGCCAGGAGCCCAGACCCAGGGATAGTG...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACACTATCCCTGGGTCTaGGCTCCTGGCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEHYPWV*APGFLE
Trigger: CTCCAGGAAGCCAGGAGCCCAGACCCAGGGATAGTG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCACAGAGGTGGCTGCGTaGGACCCGAGTCGGCACGAT +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSTEVAA*DPSRHD
Trigger: ATCGTGCCGACTCGGGTCCCACGCAGCCACCTCTGT...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAACCGCTGGGTCCCGCTTaGGTTCAGGACGTCAACGTA +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQPLGPA*VQDVNV
Trigger: TACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGG...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCGCCGGCTCGCTCCGCTaGGTCCCGCTTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIAGSLR*VPLGFR
Trigger: CCTGAACCCAAGCGGGACCCAGCGGAGCGAGCCGGC...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACCGTCCCGAACGTCCCTaGGGTCTCACTGAAGACACT +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHRPERP*GLTEDT
Trigger: AGTGTCTTCAGTGAGACCCCAGGGACGTTCGGGACG...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313084.9
CDS-3UTR CCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACCCTGCCAGTCCCGTCTaGAAGCTGTGGTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHPASPV*KLWFFC
Trigger: GCAGAAGAACCACAGCTTCCAGACGGGACTGGCAGG...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAAATAATTCATTACGATaGGCGGTGAGGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRNNSLR*AVRREA
Trigger: TGCCTCCCTCCTCACCGCCCATCGTAATGAATTATT...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTTACTACCGACCATGTaGCTCTCCTGTGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVLLPTM*LSCGRD
Trigger: GTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAAAGCGCGGGACTCACTaGGCAGTGACTCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQKRGTH*AVTHSW
Trigger: CCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTT...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCAAGCGCGGGACTCACTaGGCAGTGACTCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLKRGTH*AVTHSW
Trigger: CCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTT...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTAGACAGCCGGCTCTCTaGGGCTCCTTCCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAARQPAL*GSFPVT
Trigger: AGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAAGACAGCCGGCTCTCTaGGGCTCCTTCCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHERQPAL*GSFPVT
Trigger: AGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATCCCCAGGGGAGAAAGTaGGTCATGTGGATTGTACCA +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNPQGRK*VMWIVP
Trigger: TGGTACAATCCACATGACCCACTTTCTCCCCTGGGG...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTGGAAAACATCCTGGGTaGTCTGGGCTAAATGATCAA +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAGKHPG*SGLNDQ
Trigger: TTGATCATTTAGCCCAGACCACCCAGGATGTTTTCC...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGAAAACATCCTGGGTaGTCTGGGCTAAATGATCAA +
Preference number: 4 (lower is better)
Translates to: STHSARFKHGEGPDGAEQGKHPG*SGLNDQ
Trigger: TTGATCATTTAGCCCAGACCACCCAGGATGTTTTCC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAGCCTGTGGAACATTTTaGAAAACATCCTGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRACGTF*KTSWVV
Trigger: GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGC...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTCTCCTGGATTCTGCCTaGGCTCTGGGCTTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASLLDSA*ALGLPS
Trigger: ACTGGGCAAGCCCAGAGCTCAGGCAGAATCCAGGAG...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGCTGGCAACACTTTGCTaGGAAGCGAGGCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWLATLC*EARLSE
Trigger: TTCTGACAGCCTCGCTTCTCAGCAAAGTGTTGCCAG...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTCGTCAAAACTCCCCGTaGAGCGAGGATCGTACCTCC +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFRQNSP*SEDRTS
Trigger: GGAGGTACGATCCTCGCTTCACGGGGAGTTTTGACG...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGGCCGGCTGTCCTTCTaGAGGCAGATTGGGAATCAC +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQGRLSF*RQIGNH
Trigger: GTGATTCCCAATCTGCCTTCAGAAGGACAGCCGGCC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGCAAGTAGCAGAGCGTaGCCCCACAGGCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAASSRA*PHRPFF
Trigger: GAAGAATGGCCTGTGGGGTCACGCTCTGCTACTTGC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGCATCCGTCCGGACATaGGCTGGTAGACTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFASVRT*AGRLSA
Trigger: TGCAGACAGTCTACCAGCTCATGTCCGGACGGATGC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTATCCAAGAGGCCCCTTaGAGCCAGAGTGTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAIQEAP*SQSVAH
Trigger: ATGGGCGACACTCTGGCTTCAAGGGGCCTCTTGGAT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGTCTGCACAAGCTGGCTaGTCAACACCGGGGAATACA +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWSAQAG*STPGNT
Trigger: TGTATTCCCCGGTGTTGATCAGCCAGCTTGTGCAGA...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTTTCTGCATCTGGGGATaGGAGAGCGAGGAGGCCATC +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFFCIWG*ESEEAI
Trigger: GATGGCCTCCTCGCTCTCTCATCCCCAGATGCAGAA...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313084.9
CDS-3UTR TCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTTTCTGCATCTGGGGATaGGAGAGCGAGGAGGCCATC +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAFCIWG*ESEEAI
Trigger: GATGGCCTCCTCGCTCTCTCATCCCCAGATGCAGAA...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313084.9
CDS-3UTR TCA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGTTCGGCAAACAATTCTaGGTCAAAGATTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: GSSEALIENTAPSTHSARFGKQF*VKDSVF
Trigger: AAAGACTGAATCTTTGACTCAGAATTGTTTGCCGAA...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTAGTGCTACCAACCTCTaGACCAACGTCCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASSATNL*TNVPQG
Trigger: CCCCTGGGGGACGTTGGTTCAGAGGTTGGTAGCACT...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGGCCCGTCTCTGAGTTaGACAGGGTTGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQGPSLS*TGLSPP
Trigger: TGGTGGACTCAACCCTGTTCAACTCAGAGACGGGCC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGGCCCGTCTCTGAGTTaGACAGGGTTGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEGPSLS*TGLSPP
Trigger: TGGTGGACTCAACCCTGTTCAACTCAGAGACGGGCC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTACAATTCTGGGATTTTaGCTGAATGTACTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGTILGF*LNVLSG
Trigger: TCCTGAAAGTACATTCAGGCAAAATCCCAGAATTGT...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCGCAGCTGGTCTGCACTaGTTCTGGCGGACACAGGTC +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSAAGLH*FWRTQV
Trigger: GACCTGTGTCCGCCAGAAGCAGTGCAGACCAGCTGC...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCGCCCACAGAGTCGTTaGTGGGCTCTCACACTTCAC +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLRPQSR*WALTLH
Trigger: GTGAAGTGTGAGAGCCCAGCAACGACTCTGTGGGCG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTTCTCAGAAGCACCAATaGCACCTCGGCTCTGCACCG +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFSQKHQ*HLGSAP
Trigger: CGGTGCAGAGCCGAGGTGGCATTGGTGCTTCTGAGA...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCTGGGCCGGGGGCAAGTaGAGGCACTGGCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIWAGGK*RHWLWP
Trigger: TGGCCACAGCCAGTGCCTGCACTTGCCCCCGGCCCA...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCCTTCAGGATATCCTTaGCTGGGAGGTGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLPSGYP*LGGGRS
Trigger: GGAACGGCCACCTCCCAGGCAAGGATATCCTGAAGG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTTGCTCAGACGTGTGCTaGAGCAAGGCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAACSDVC*SKASML
Trigger: CAGCATGGAGGCCTTGCTGCAGCACACGTCTGAGCA...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGCGGCTGCGTCAGGATaGTCTTCGCGATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAAAASG*SSRWPH
Trigger: GTGAGGCCATCGCGAAGAGCATCCTGACGCAGCCGC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGAATACAGGTGCGGCTaGGTCAGGATGCTCTTCGCG +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAEYRCG*VRMLFA
Trigger: CGCGAAGAGCATCCTGACGCAGCCGCACCTGTATTC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGAATACAGGTGCGGCTaGGTCAGGATGCTCTTCGCG +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEEYRCG*VRMLFA
Trigger: CGCGAAGAGCATCCTGACGCAGCCGCACCTGTATTC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGAATACAGGTGCGGCTaGGTCAGGATGCTCTTCGCG +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFEYRCG*VRMLFA
Trigger: CGCGAAGAGCATCCTGACGCAGCCGCACCTGTATTC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATAACTGGGAAGCCATCTaGACAAGCTGGCTGATCAAC +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNNWEAI*TSWLIN
Trigger: GTTGATCAGCCAGCTTGTGCAGATGGCTTCCCAGTT...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCAACTGGGAAGCCATCTaGACAAGCTGGCTGATCAAC +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVNWEAI*TSWLIN
Trigger: GTTGATCAGCCAGCTTGTGCAGATGGCTTCCCAGTT...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCAACCAGCCACGTGGGTaGGGCCAAGGACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSNQPRG*GQGLLF
Trigger: GAAGAGGAGTCCTTGGCCGCACCCACGTGGCTGGTT...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCCTGGCCTGTCCAACTaGTCCATCTCGGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLPGLSN*SISELG
Trigger: TCCGAGTTCCGAGATGGAGCAGTTGGACAGGCCAGG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGGACGAACTGCCCAGTaGTGTACTTTGGAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFGRTAQ*CTLERL
Trigger: CAGGCGCTCCAAAGTACACCACTGGGCAGTTCGTCC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCTTCAGGCTCTGAACTaGGACCGACCTCTGCACTCC +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLLQALN*DRPLHS
Trigger: GGAGTGCAGAGGTCGGTCCCAGTTCAGAGCCTGAAG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTGTGCGTACGGTTTTCTaGGCTATCTCCCCGGGCGAG +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASVRTVF*AISPGE
Trigger: CTCGCCCGGGGAGATAGCCCAGAAAACCGTACGCAC...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTCCACAGAGTCGTTGCTaGGCTCTCACACTTCACGGG +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAPQSRC*ALTLHG
Trigger: CCCGTGAAGTGTGAGAGCCCAGCAACGACTCTGTGG...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTCTTTCGAGGCCAGGCTaGCCCTGGGCATCTTTCGTG +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASLSRPG*PWASFV
Trigger: CACGAAAGATGCCCAGGGCCAGCCTGGCCTCGAAAG...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCATGAAACTTGCTCCATaGCAGGCCAGACGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPMKLAP*QARRCR
Trigger: CCGACACCGTCTGGCCTGCCATGGAGCAAGTTTCAT...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGCCATCTGCACAAGCTaGCTGATCAACACCGGGGAA +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPAICTS*LINTGE
Trigger: TTCCCCGGTGTTGATCAGCCAGCTTGTGCAGATGGC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCGGCTTCTCTTTCAGCTaGGGATCGAAGAGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVGFSFS*GSKSRN
Trigger: GTTACGACTCTTCGATCCCCAGCTGAAAGAGAAGCC...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGCACTCTGGCAGGACTaGCCAATGGGCCGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAALWQD*PMGRQG
Trigger: TCCCTGACGGCCCATTGGCCAGTCCTGCCAGAGTGC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCGGAACATCGGCACTCTaGCAGGACTGGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSGTSAL*QDWPMG
Trigger: GCCCATTGGCCAGTCCTGCCAGAGTGCCGATGTTCC...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGGGCTCCTGGCTTCCTaGAGCAAGTGTCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEGLLAS*SKCLLS
Trigger: GGAAAGGAGACACTTGCTCCAGGAAGCCAGGAGCCC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCCACTATCCCTGGGTCTaGGCTCCTGGCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSHYPWV*APGFLE
Trigger: CTCCAGGAAGCCAGGAGCCCAGACCCAGGGATAGTG...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCCTGCGGCACTATCCCTaGGTCTGGGCTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKALRHYP*VWAPGF
Trigger: GAAGCCAGGAGCCCAGACCCAGGGATAGTGCCGCAG...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTTTGTTCTTGTCATCTaGCAAATAAGCTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAFVLVI*QISFCL
Trigger: AAGACAGAAGCTTATTTGCCAGATGACAAGAACAAA...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACCAGCTTGCACAGTCTTaGGCATCGAGGTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHQLAQS*ASRLEV
Trigger: CACCTCCAACCTCGATGCCCAAGACTGTGCAAGCTG...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCCCGCTGGGTCCCGCTTaGGTTCAGGACGTCAACGTA +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSPLGPA*VQDVNV
Trigger: TACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGG...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCTGGGAGTGGCGCGAGTaGAGCGACAAAGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAWEWRE*SDKVRR
Trigger: CCTGCGGACTTTGTCGCTCCACTCGCGCCACTCCCA...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGAGAAGGAATTGGGAGTaGCGCGAGTGGAGCGACAAA +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWRRNWE*REWSDK
Trigger: TTTGTCGCTCCACTCGCGCCACTCCCAATTCCTTCT...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGGTTGTAGAAGGGCATaGCCCCGCTGGGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSGCRRA*PRWEGP
Trigger: GGGGCCCTCCCAGCGGGGCCATGCCCTTCTACAACC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAACATGTGGCTCTCCTGTaGCAGAGACAGCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQHVALL*QRQLRL
Trigger: AAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATG...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCAAGCGCGGGACTCACTaGGCAGTGACTCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSKRGTH*AVTHSW
Trigger: CCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTT...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGTGCAGAGCAGGGGTTaGGGTCTGCCTCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAVQSRG*GLPQSP
Trigger: GGGTGACTGAGGCAGACCCCAACCCCTGCTCTGCAC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCGGCGAGGGCCCAGATaGTGCAGAGCAGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIRRGPR*CRAGVG
Trigger: CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGCCTGTGGAACATTTTaGAAAACATCCTGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEACGTF*KTSWVV
Trigger: GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCCCCGTCTGGAAGCTGTaGTTCTTCTGCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPPVWKL*FFCIWG
Trigger: ACCCCAGATGCAGAAGAACCACAGCTTCCAGACGGG...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCTCTCTGGCATGTGTGTaGGGAACAAGCAAACCGGGG +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLSLACV*GTSKPG
Trigger: CCCCGGTTTGCTTGTTCCTCACACACATGCCAGAGA...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR TCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGAAGGGGCCCATATCTaGACTGGTCACTCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAEGAHI*TGHSGR
Trigger: CCTCCCCGAGTGACCAGTTCAGATATGGGCCCCTTC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATCAGACTTTCTGGATTTaGCAGCTCCGAAAACATGGC +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNQTFWI*QLRKHG
Trigger: GCCATGTTTTCGGAGCTGTCAAATCCAGAAAGTCTG...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTGCAAGTAGCAGAGCGTaGCCCCACAGGCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASASSRA*PHRPFF
Trigger: GAAGAATGGCCTGTGGGGTCACGCTCTGCTACTTGC...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCCATTACGATGGGCGGTaGGGAGGGAGGCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAHYDGR*GGRHSV
Trigger: CACACTGTGCCTCCCTCCTCACCGCCCATCGTAATG...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACAGGTCGCCAGGAGCCTaGTTAAAATGCTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHRSPGA*LKCWLT
Trigger: AGTGAGCCAGCATTTTAATCAGGCTCCTGGCGACCT...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
CDS-3UTR GCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTGCACAAGTCGATGCTaGTTACAGAAGGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVCTSRC*LQKEAG
Trigger: TCCTGCTTCCTTCTGTAAGCAGCATCGACTTGTGCA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTTCAACATTCTCATACTaGGAGCCGCTGGCATCCGGC +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAASTFSY*EPLASG
Trigger: GCCGGATGCCAGCGGCTCGCAGTATGAGAATGTTGA...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGACACGCTGTCAGGGTaGACTGTATGCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFDTLSG*TVCSVA
Trigger: TGCCACACTGCATACAGTGCACCCTGACAGCGTGTC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGCAGCTGGTCTGCACTaGTTCTGGCGGACACAGGTC +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAAAGLH*FWRTQV
Trigger: GACCTGTGTCCGCCAGAAGCAGTGCAGACCAGCTGC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCGGGCGGCAGCTGGTCTaGACTGCTTCTGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIGRQLV*TASGGH
Trigger: GTGTCCGCCAGAAGCAGTGCAGACCAGCTGCCGCCC...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTATGTTGTCTGGTGGCTaGTCCAGGTTGCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAMLSGG*SRLPGE
Trigger: TTCCCCTGGCAACCTGGAGCAGCCACCAGACAACAT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCGGGACAGACCTGGGGTaGACAGAGGGTCTCCATGTT +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSGTDLG*TEGLHV
Trigger: AACATGGAGACCCTCTGTGCACCCCAGGTCTGTCCC...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGGGCCAGAAGGACGTTaGCTCCAAAATCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAGPEGR*LQNLAA
Trigger: AGCTGCCAGATTTTGGAGGCAACGTCCTTCTGGCCC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAAGCCCAACTGCTGACTaGAGGTCTATCCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHESPTAD*RSIPHQ
Trigger: TTGGTGGGGGATAGACCTGCAGTCAGCAGTTGGGCT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTAGCCCAACTGCTGACTaGAGGTCTATCCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFSPTAD*RSIPHQ
Trigger: TTGGTGGGGGATAGACCTGCAGTCAGCAGTTGGGCT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGAGTAATCGCTCTGACTaGTCCATCCACTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAESNRSD*SIHFWN
Trigger: GTTCCAAAAGTGGATGGAGCAGTCAGAGCGATTACT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGTATGCGTCATACTCTaGATCACACCAATACCTCCG +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNVCVIL*ITPIPP
Trigger: CGGAGGTATTGGTGTGATGCAGAGTATGACGCATAC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCGCTGTGCAGGCTCCGTaGCGAGTGCTCGCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIAVQAP*RVLAVD
Trigger: GTCCACAGCGAGCACTCGGCACGGAGCCTGCACAGC...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGCTGTGCAGGCTCCGTaGCGAGTGCTCGCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSAVQAP*RVLAVD
Trigger: GTCCACAGCGAGCACTCGGCACGGAGCCTGCACAGC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTTGCTCAGACGTGTGCTaGAGCAAGGCCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASCSDVC*SKASML
Trigger: CAGCATGGAGGCCTTGCTGCAGCACACGTCTGAGCA...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTCCTGGCCTGTCCAACTaGTCCATCTCGGAACTCGGA +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASPGLSN*SISELG
Trigger: TCCGAGTTCCGAGATGGAGCAGTTGGACAGGCCAGG...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGAGCTCTGGTTCCTGCTaGTCTTCTAGAGTACATGTT +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAESSGSC*SSRVHV
Trigger: AACATGTACTCTAGAAGAGCAGCAGGAACCAGAGCT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACAGGTGGACTGCTTTTaGACGAACTGCCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEQVDCF*TNCPVV
Trigger: CACCACTGGGCAGTTCGTCCAAAAGCAGTCCACCTG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGCCTTGCAAGACAGGTaGACTGCTTTTGGACGAACT +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWALQDR*TAFGRT
Trigger: AGTTCGTCCAAAAGCAGTCCACCTGTCTTGCAAGGC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCACCAGAAAACGGACTaGCATGTGCTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLHQKTD*HVLWAV
Trigger: CACAGCCCAGAGCACATGCCAGTCCGTTTTCTGGTG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGGAAGGGGATGCTGCTaGGGTGACCACACCGTCATG +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAGRGCC*GDHTVM
Trigger: CATGACGGTGTGGTCACCCCAGCAGCATCCCCTTCC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATCAGGATCAGAGTTATTaGCCAGGTGGCTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNQDQSY*PGGFHF
Trigger: AAAGTGGAAGCCACCTGGCCAATAACTCTGATCCTG...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATTCTGCAGAGACTCAGTaGGCGGTGAGGATAATAAAC +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNSAETQ*AVRIIN
Trigger: GTTTATTATCCTCACCGCCCACTGAGTCTCTGCAGA...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGAAGGACAGAGCTGGTTaGAATCCCAGACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEKDRAG*NPRQRS
Trigger: ACTTCTTTGTCTGGGATTCCAACCAGCTCTGTCCTT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGTCTTCCTGATGACTaGAATGGTTTGCCTTATTAC +
Preference number: 4 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQCLPDD*NGLPYY
Trigger: GTAATAAGGCAAACCATTCCAGTCATCAGGAAGACA...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGATTGTCTGGGATGACTaGCAACACTTTGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEIVWDD*QHFAEK
Trigger: CTTCTCAGCAAAGTGTTGCCAGTCATCCCAGACAAT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCCTTTCGAGGCCAGGCTaGCCCTGGGCATCTTTCGTG +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKALSRPG*PWASFV
Trigger: CACGAAAGATGCCCAGGGCCAGCCTGGCCTCGAAAG...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCATAATCGTACTGGCTaGAGTAATAGCTTGCATAGT +
Preference number: 4 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAHNRTG*SNSLHS
Trigger: ACTATGCAAGCTATTACTCCAGCCAGTACGATTATG...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTAGTTGGACAAGACCATaGCGAGGTGCGGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFSWTRP*RGAASN
Trigger: ATTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTAGTTGGACAAGACCATaGCGAGGTGCGGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAASWTRP*RGAASN
Trigger: ATTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCAGTGGAAGGCTTGCGTaGCCAGCCCCATTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKASGRLA*PAPFPP
Trigger: TGGCGGAAATGGGGCTGGCCACGCAAGCCTTCCACT...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGGATGCTCTTCGCGATaGCCTCACAGTAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAGCSSR*PHSSGR
Trigger: CCTTCCACTACTGTGAGGCCATCGCGAAGAGCATCC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGGATGCTCTTCGCGATaGCCTCACAGTAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEGCSSR*PHSSGR
Trigger: CCTTCCACTACTGTGAGGCCATCGCGAAGAGCATCC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGGATGCTCTTCGCGATaGCCTCACAGTAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQGCSSR*PHSSGR
Trigger: CCTTCCACTACTGTGAGGCCATCGCGAAGAGCATCC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACTTTGTTCTTGTCATCTaGCAAATAAGCTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADFVLVI*QISFCL
Trigger: AAGACAGAAGCTTATTTGCCAGATGACAAGAACAAA...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTCCCGTCTGGAAGCTGTaGTTCTTCTGCATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAPVWKL*FFCIWG
Trigger: TCCCCAGATGCAGAAGAACCACAGCTTCCAGACGGG...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313084.9
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCACCAGGTGCTTCCTCTaGCCAATCCTCCCTAGCCTT +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLTRCFL*PILPSL
Trigger: AAGGCTAGGGAGGATTGGCCAGAGGAAGCACCTGGT...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTACTGCTGTGTCTCCCTaGGGGCGGGACGGAGATCGC +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSTAVSP*GRDGDR
Trigger: GCGATCTCCGTCCCGCCCCCAGGGAGACACAGCAGT...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCGGCTTGGAGAGGCCCTaGTTACTACCGACCATGTGG +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSGLERP*LLPTMW
Trigger: CCACATGGTCGGTAGTAACCAGGGCCTCTCCAAGCC...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCAAGCGCGGGACTCACTaGGCAGTGACTCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAKRGTH*AVTHSW
Trigger: CCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTT...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATAGCGGGACACGCCTGTaGAACATTTTGGAAAACATC +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNSGTRL*NILENI
Trigger: GATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCT...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTTGAATCAAAAGTCGTaGCAGTCGACCCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVLNQKS*QSTPEQ
Trigger: CTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACAGAGCTTAAAACCTTaGGCTCTGGGGCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEQSLKP*ALGQAL
Trigger: CAGAGCCTGCCCCAGAGCCCAAGGTTTTAAGCTCTG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
ENST00000453963.5
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTTCTGCATCTGGGGTTaGCACGAACAAGTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVFCIWG*HEQVRR
Trigger: CCTTCTAACTTGTTCGTGCCAACCCCAGATGCAGAA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGGGATGCTGCTGGGGTaGCCACACCGTCATGTGGGT +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSGMLLG*PHRHVG
Trigger: ACCCACATGACGGTGTGGTCACCCCAGCAGCATCCC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGTCGTCAAAGTCCGCTTaGCCAGATAAGCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWSSKSA*PDKPAF
Trigger: AAAAGCAGGCTTATCTGGTCAAGCGGACTTTGACGA...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACTGGCAACACTTTGCTaGGAAGCGAGGCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHELATLC*EARLSE
Trigger: TTCTGACAGCCTCGCTTCTCAGCAAAGTGTTGCCAG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTATCACTTTGATAAGCTaGCCGCCAGGGCCAAACCTG +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAITLIS*PPGPNL
Trigger: CAGGTTTGGCCCTGGCGGTCAGCTTATCAAAGTGAT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATCACTTTGATAAGCTaGCCGCCAGGGCCAAACCTG +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEITLIS*PPGPNL
Trigger: CAGGTTTGGCCCTGGCGGTCAGCTTATCAAAGTGAT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAAAGAATGGCAAACTGTaGTTGGATCCGATTAAGACA +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRKNGKL*LDPIKT
Trigger: TGTCTTAATCGGATCCAATCACAGTTTGCCATTCTT...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATTTTCCATCCAGAATCTaGAAGGATGGTGGAATTAAT +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHFPSRI*KDGGIN
Trigger: ATTAATTCCACCATCCTTTCAGATTCTGGATGGAAA...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACCCACAGAAAGTAAAGTaGGGCTGGAAGCGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHPQKVK*GWKRLC
Trigger: GCAAAGACGCTTCCAGCCTCACTTTACTTTCTGTGG...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAAGGTCGCCAGGAGCCTaGTTAAAATGCTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHERSPGA*LKCWLT
Trigger: AGTGAGCCAGCATTTTAATCAGGCTCCTGGCGACCT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
CDS-3UTR TCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTAGGTCGCCAGGAGCCTaGTTAAAATGCTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFRSPGA*LKCWLT
Trigger: AGTGAGCCAGCATTTTAATCAGGCTCCTGGCGACCT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
CDS-3UTR GCA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATACAATTCTGGGATTTTaGCTGAATGTACTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TGPHGGQSPALWVHKITHTILGF*LNVLSG
Trigger: TCCTGAAAGTACATTCAGGCAAAATCCCAGAATTGT...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTTTCACTCCTGGATTCTaGCTGAGCTCTGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASFTPGF*LSSGLA
Trigger: GGCAAGCCCAGAGCTCAGGCAGAATCCAGGAGTGAA...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTTTCCGTGGCTTCTGCTaGTATAGCTGGATGACACGC +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFFRGFC*YSWMTR
Trigger: GCGTGTCATCCAGCTATAGCAGCAGAAGCCACGGAA...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTCACGTTGGCGCGATCTaGCTCAAATGGTTTTACCCC +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFHVGAI*LKWFYP
Trigger: GGGGTAAAACCATTTGAGGCAGATCGCGCCAACGTG...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCACGTTGGCGCGATCTaGCTCAAATGGTTTTACCCC +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLHVGAI*LKWFYP
Trigger: GGGGTAAAACCATTTGAGGCAGATCGCGCCAACGTG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGGGACAGACCTGGGGTaGACAGAGGGTCTCCATGTT +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAGTDLG*TEGLHV
Trigger: AACATGGAGACCCTCTGTGCACCCCAGGTCTGTCCC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCAGGCCTCTTCTCGGGTaGTGGATACACAGTATCCAA +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPRPLLG*WIHSIQ
Trigger: TTGGATACTGTGTATCCAGCACCCGAGAAGAGGCCT...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAAAGACTGGAGGATTCTaGAGAGACTCAGTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEKTGGF*RDSVGG
Trigger: ACCGCCCACTGAGTCTCTGCAGAATCCTCCAGTCTT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCGGTGGCACCAGCTCCTaGTGGGCTCTTTCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIGGTSS*WALSRP
Trigger: TGGCCTCGAAAGAGCCCAGCAGGAGCTGGTGCCACC...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGCTGGAGTAATAGCTTaGATAGTAATCGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEAGVIA*IVIALT
Trigger: AGTCAGAGCGATTACTATGCAAGCTATTACTCCAGC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTATGCGTCATACTCTaGATCACACCAATACCTCCG +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWVCVIL*ITPIPP
Trigger: CGGAGGTATTGGTGTGATGCAGAGTATGACGCATAC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCTCCTGCTCAGACGTGTaGTGCAGCAAGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKASCSDV*CSKASM
Trigger: CATGGAGGCCTTGCTGCAGCACACGTCTGAGCAGGA...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATCAGGCCATTCTTCATTaGAGACTCCAAAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNQAILH*RLQSIL
Trigger: AAGGATGCTTTGGAGTCTGCAATGAAGAATGGCCTG...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCAACTGGGAAGCCATCTaGACAAGCTGGCTGATCAAC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPNWEAI*TSWLIN
Trigger: GTTGATCAGCCAGCTTGTGCAGATGGCTTCCCAGTT...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGGTGGCGCAGGCCTGTaGCAGCTGAGCAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSGGAGL*QLSRVV
Trigger: TACAACCCTGCTCAGCTGGCACAGGCCTGCGCCACC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTCTACTAAAAGCAAATaGATCCGTGACCGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVSTKSK*IRDRLQ
Trigger: TTGCAGCCGGTCACGGATCCATTTGCTTTTAGTAGA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTTGGCCCCCACTGTCCTaGCATCTGCAGACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSWPPLS*HLQTRL
Trigger: CAGCCTGGTCTGCAGATGCCAGGACAGTGGGGGCCA...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGGAAATGAGGAACGCTaGTGGCACAGGGCACCCCGC +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSGNEER*WHRAPR
Trigger: GCGGGGTGCCCTGTGCCACCAGCGTTCCTCATTTCC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATTCTGCCTGAGCTCTaGGCTTGCCCAGTGATTCAC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEILPEL*ACPVIH
Trigger: GTGAATCACTGGGCAAGCCCAGAGCTCAGGCAGAAT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCTTCTGCTGCTATAGCTaGATGACACGCTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPFCCYS*MTRCQG
Trigger: ACCCTGACAGCGTGTCATCCAGCTATAGCAGCAGAA...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGTTGCCTCCAAAATCTaGCAGCTCACTTTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEVASKI*QLTLRP
Trigger: TGGGCGCAAAGTGAGCTGCCAGATTTTGGAGGCAAC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGTTGCCTCCAAAATCTaGCAGCTCACTTTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLVASKI*QLTLRP
Trigger: TGGGCGCAAAGTGAGCTGCCAGATTTTGGAGGCAAC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGCTGAGCAATCAAGACTaGAGGATTCTGCAGAGACTC +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWLSNQD*RILQRL
Trigger: GAGTCTCTGCAGAATCCTCCAGTCTTGATTGCTCAG...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACCAAGTTCTCTGGAACTaGCTGGGATGGTGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHQVLWN*LGWWLN
Trigger: GTTCAACCACCATCCCAGCCAGTTCCAGAGAACTTG...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGCGAGGCTGTCAGAATaGGACGGGTTGTACACGTTT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEARLSE*DGLYTF
Trigger: AAACGTGTACAACCCGTCCCATTCTGACAGCCTCGC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGATCTGGATTGCTTCGTTaGTTGCGAACTTTAAGAATG +
Preference number: 4 (lower is better)
Translates to: APAWRKLLESKVVAVDPRSGLLR*LRTLRM
Trigger: CATTCTTAAAGTTCGCAACCAACGAAGCAATCCAGA...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTCAGCTTGCACAGTCTTaGGCATCGAGGTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASQLAQS*ASRLEV
Trigger: CACCTCCAACCTCGATGCCCAAGACTGTGCAAGCTG...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAAGAAGGAATTGGGAGTaGCGCGAGTGGAGCGACAAA +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQRRNWE*REWSDK
Trigger: TTTGTCGCTCCACTCGCGCCACTCCCAATTCCTTCT...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACAAGTTAGAAGGAATTaGGAGTGGCGCGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEQVRRN*EWREWS
Trigger: GCTCCACTCGCGCCACTCCCAATTCCTTCTAACTTG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCCATGTGGCTCTCCTGTaGCAGAGACAGCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAHVALL*QRQLRL
Trigger: AAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATG...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTTTACTACCGACCATGTaGCTCTCCTGTGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFLLPTM*LSCGRD
Trigger: GTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAA...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCCAGTCCCCAGCGCTTTaGGTACACAAAATCACCCAT +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPQSPAL*VHKITH
Trigger: ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTG...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCTCCTTCCCAGTGACTaGGCCACACGGTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCILLPSD*ATRWAV
Trigger: GACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGGAAAACATCCTGGGTaGTCTGGGCTAAATGATCAA +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNGKHPG*SGLNDQ
Trigger: TTGATCATTTAGCCCAGACCACCCAGGATGTTTTCC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTATAGCCGCTCCCGCCTaGAGGAAGCTTCTTGAATCA +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAIAAPA*RKLLES
Trigger: TGATTCAAGAAGCTTCCTCCAGGCGGGAGCGGCTAT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCTCCTGGATTCTGCCTaGGCTCTGGGCTTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCILLDSA*ALGLPS
Trigger: ACTGGGCAAGCCCAGAGCTCAGGCAGAATCCAGGAG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGTTTCCAACTTCTTGCTaGATGAATGTGCCAACCAGC +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWFPTSC*MNVPTS
Trigger: GCTGGTTGGCACATTCATTCAGCAAGAAGTTGGAAA...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGGCTGGGATGGTGGTTaGACCAGCAAATTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAGWDGG*TSKLAG
Trigger: GCCTGCTAATTTGCTGGTTCAACCACCATCCCAGCC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACCTGGGCATCTTTCGTaGCCTGCTGATAAAAACGGT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEPGHLS*PADKNG
Trigger: ACCGTTTTTATCAGCAGGTCACGAAAGATGCCCAGG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACCTCTCTCAAAAACCGTaGACTAATGCCGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHLSQKP*TNAEGT
Trigger: GGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAG...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCAGTGCTACCAACCTCTaGACCAACGTCCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCISATNL*TNVPQG
Trigger: CCCCTGGGGGACGTTGGTTCAGAGGTTGGTAGCACT...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCGTCTGGGGCGGTGGCTaGATGACTGAACCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIVWGGG*MTEPLH
Trigger: GTGCAAGGGTTCAGTCATGCAGCCACCGCCCCAGAC...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCATGTGGGTTTTGCCTaGTCAGGGGTCGGTCGAGCC +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIHVGFA*SGVGRA
Trigger: GGCTCGACCGACCCCTGAGCAGGCAAAACCCACATG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCAGGTGGCTTCCACTTTaGAAGTGGCTCACCTCGTCT +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSRWLPL*KWLTSS
Trigger: AGACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCT...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTAGGTGGCTTCCACTTTaGAAGTGGCTCACCTCGTCT +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASRWLPL*KWLTSS
Trigger: AGACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCT...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTGCCTTCCGTGGCTTCTaGTGCTATAGCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASAFRGF*CYSWMT
Trigger: TGTCATCCAGCTATAGCAGCAGAAGCCACGGAAGGC...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGCGTGCGGAAGCATGTaGACAGCTTCCGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSACGSM*TASVVE
Trigger: CTCCACCACGGAAGCTGTGCACATGCTTCCGCACGC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTAGGCCTCTTCTCGGGTaGTGGATACACAGTATCCAA +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAARPLLG*WIHSIQ
Trigger: TTGGATACTGTGTATCCAGCACCCGAGAAGAGGCCT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTAGGTGGCTGAGGTTTTaGACACACATAAAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASRWLRF*THIKRR
Trigger: CCGGCGCTTTATGTGTGTGCAAAACCTCAGCCACCT...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCGCTGGAGTAATAGCTTaGATAGTAATCGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVAGVIA*IVIALT
Trigger: AGTCAGAGCGATTACTATGCAAGCTATTACTCCAGC...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTAATTGCTGCGGTAGGTaGCGTAGGCAAAATCGCCGT +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASNCCGR*RRQNRR
Trigger: ACGGCGATTTTGCCTACGGCACCTACCGCAGCAATT...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGTTCCACCTGCTCCACTaGCTCATTCGTGAAATCAAT +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWFHLLH*LIREIN
Trigger: ATTGATTTCACGAATGAGGCAGTGGAGCAGGTGGAA...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCTCCTCCTCTTCCACCTaGTCCACTGCCTCATTCGTG +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKASSSST*STASFV
Trigger: CACGAATGAGGCAGTGGAGCAGGTGGAAGAGGAGGA...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCAGTCACCCTCTCTTTaGTCCCAGCACCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLQSPSL*SQHLKG
Trigger: TCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGACTG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACGATACTCTCCCCAAGTaGTACCAACCTCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHDTLPK*YQPLNQ
Trigger: TTGGTTCAGAGGTTGGTAGCACTTGGGGAGAGTATC...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAGCCTTAAAGCTTTaGATCAGTGAGAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQEALKL*ISERRP
Trigger: GGGCCTCCTCTCACTGATGCAAAGCTTTAAGGCTTC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGAAGCCTTAAAGCTTTaGATCAGTGAGAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLEALKL*ISERRP
Trigger: GGGCCTCCTCTCACTGATGCAAAGCTTTAAGGCTTC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGCCTTGCAAGACAGGTaGACTGCTTTTGGACGAACT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEALQDR*TAFGRT
Trigger: AGTTCGTCCAAAAGCAGTCCACCTGTCTTGCAAGGC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGGCCTAGCCCAGGGCTaGAGCAGAAATCGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAGLAQG*SRNRQS
Trigger: ACTTTGACGATTTCTGCTCCAGCCCTGGGCTAGGCC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTCAGGCCCAGATTGTCTaGGATGACTGGCAACACTTT +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFQAQIV*DDWQHF
Trigger: AAAGTGTTGCCAGTCATCCCAGACAATCTGGGCCTG...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAATGACATCCACCTTATaGGTGTCGTCTTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQMTSTL*VSSLAR
Trigger: CCTGGCCAAAGACGACACCCATAAGGTGGATGTCAT...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAACAGAGGGTCGTTGATTaGGAGGCTGTTAGCAAACCT +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQQRVVD*EAVSKP
Trigger: AGGTTTGCTAACAGCCTCCCAATCAACGACCCTCTG...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAACAGAGGGTCGTTGATTaGGAGGCTGTTAGCAAACCT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEQRVVD*EAVSKP
Trigger: AGGTTTGCTAACAGCCTCCCAATCAACGACCCTCTG...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCATGAACTTAAACACCTaGAAACTAGGCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPMNLNT*KLGRGQ
Trigger: CTGCCCCCTGCCTAGTTTCCAGGTGTTTAAGTTCAT...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTAGTGGAAGGCTTGCGTaGCCAGCCCCATTTCCGCCA +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSSGRLA*PAPFPP
Trigger: TGGCGGAAATGGGGCTGGCCACGCAAGCCTTCCACT...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGGCTTCTCTTTCAGCTaGGGATCGAAGAGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLGFSFS*GSKSRN
Trigger: GTTACGACTCTTCGATCCCCAGCTGAAAGAGAAGCC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGGCTTCTCTTTCAGCTaGGGATCGAAGAGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEGFSFS*GSKSRN
Trigger: GTTACGACTCTTCGATCCCCAGCTGAAAGAGAAGCC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCATCGAGGTTGGAGGTaGGGGCGGGGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIHRGWR*GRGFLL
Trigger: GAGAAGAAAGCCCCGCCCCCACCTCCAACCTCGATG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCATCGAGGTTGGAGGTaGGGGCGGGGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSHRGWR*GRGFLL
Trigger: GAGAAGAAAGCCCCGCCCCCACCTCCAACCTCGATG...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCCGCTGGGTCCCGCTTaGGTTCAGGACGTCAACGTA +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIPLGPA*VQDVNV
Trigger: TACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGCAGTGACTCACAGCTaGGCTTGGAGAGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSAVTHS*AWRGPG
Trigger: ACCAGGGCCTCTCCAAGCCCAGCTGTGAGTCACTGC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTCAGTCCCCAGCGCTTTaGGTACACAAAATCACCCAT +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAQSPAL*VHKITH
Trigger: ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTG...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGCCTGTGGAACATTTTaGAAAACATCCTGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPACGTF*KTSWVV
Trigger: GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCATAGCCGCTCCCGCCTaGAGGAAGCTTCTTGAATCA +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSIAAPA*RKLLES
Trigger: TGATTCAAGAAGCTTCCTCCAGGCGGGAGCGGCTAT...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCTTCTGCATCTGGGGTTaGCACGAACAAGTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPFCIWG*HEQVRR
Trigger: CCTTCTAACTTGTTCGTGCCAACCCCAGATGCAGAA...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTAAGCAAATGGATCCGTaGCCGGCTGCAACGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSKQMDP*PAATGK
Trigger: CTTGCCCGTTGCAGCCGGTCACGGATCCATTTGCTT...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR TCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCTGAACTTCAGGCTCTaGACTGGGACCGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCILNFRL*TGTDLC
Trigger: GCAGAGGTCGGTCCCAGTTCAGAGCCTGAAGTTCAG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR TCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCTGAACTTCAGGCTCTaGACTGGGACCGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSLNFRL*TGTDLC
Trigger: GCAGAGGTCGGTCCCAGTTCAGAGCCTGAAGTTCAG...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR TCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTCAACTTCTTGCTGAATaGATGTGCCAACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAQLLAE*MCQPAP
Trigger: AGGAGCTGGTTGGCACATTCATTCAGCAAGAAGTTG...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCACAGACATGAGGCACTaGAAATTTTTCAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVTDMRH*KFFRRS
Trigger: ACTTCTCCTGAAAAATTTTCAGTGCCTCATGTCTGT...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCATCACTTTGATAAGCTaGCCGCCAGGGCCAAACCTG +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAITLIS*PPGPNL
Trigger: CAGGTTTGGCCCTGGCGGTCAGCTTATCAAAGTGAT...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACCCACTGCCTCATTCGTaGAATCAATCAGGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHPLPHS*NQSGLL
Trigger: AAGCAAACCTGATTGATTTCACGAATGAGGCAGTGG...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCATCCAAGAGGCCCCTTaGAGCCAGAGTGTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIIQEAP*SQSVAH
Trigger: ATGGGCGACACTCTGGCTTCAAGGGGCCTCTTGGAT...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCTCTCTCAAAAACCGTaGACTAATGCCGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLLSQKP*TNAEGT
Trigger: GGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAATGGCCTTTCTCCAAGTaGCAAGGACAAATGGATCCA +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQWPFSK*QGQMDP
Trigger: TGGATCCATTTGTCCTTGTCACTTGGAGAAAGGCCA...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAATGGCCTTTCTCCAAGTaGCAAGGACAAATGGATCCA +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEWPFSK*QGQMDP
Trigger: TGGATCCATTTGTCCTTGTCACTTGGAGAAAGGCCA...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTCTGGAGGAAGCTTCTTaGATCAAAAGTCGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAALEEAS*IKSRGS
Trigger: ACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAG...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCCTGGAGGAAGCTTCTTaGATCAAAAGTCGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLLEEAS*IKSRGS
Trigger: ACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAG...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCAGTAATCGCTCTGACTaGTCCATCCACTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPSNRSD*SIHFWN
Trigger: GTTCCAAAAGTGGATGGAGCAGTCAGAGCGATTACT...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTTCCTGCTCAGACGTGTaGTGCAGCAAGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSSCSDV*CSKASM
Trigger: CATGGAGGCCTTGCTGCAGCACACGTCTGAGCAGGA...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGAAATCAATCAGGTTTaGTTCATTGGGCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPEINQV*FIGRLP
Trigger: GGGAAGTCGCCCAATGAAGCAAACCTGATTGATTTC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTTTCCGTCCTCTGGATTaGTTCGTTGGTTGCGAACTT +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAFRPLD*FVGCEL
Trigger: AAGTTCGCAACCAACGAAGCAATCCAGAGGACGGAA...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTAACTGGGAAGCCATCTaGACAAGCTGGCTGATCAAC +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASNWEAI*TSWLIN
Trigger: GTTGATCAGCCAGCTTGTGCAGATGGCTTCCCAGTT...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGCAGGGGTTGGGGTCTaGCTCAGTCACCCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSAGVGV*LSHPLF
Trigger: AAAGAGAGGGTGACTGAGGCAGACCCCAACCCCTGC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTAAGCTGTGGTTCTTCTaGATCTGGGGTTGGCACGAA +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASKLWFF*IWGWHE
Trigger: TTCGTGCCAACCCCAGATGCAGAAGAACCACAGCTT...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGTAGTGAGGAAGATATaGCAGAGTCTGAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPVVRKI*QSLNFR
Trigger: CCTGAAGTTCAGACTCTGCCATATCTTCCTCACTAC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAATCTGCAGAGACTCAGTaGGCGGTGAGGATAATAAAC +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQSAETQ*AVRIIN
Trigger: GTTTATTATCCTCACCGCCCACTGAGTCTCTGCAGA...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACAAGGACAGAGCTGGTTaGAATCCCAGACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHKDRAG*NPRQRS
Trigger: ACTTCTTTGTCTGGGATTCCAACCAGCTCTGTCCTT...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCAAGGACAGAGCTGGTTaGAATCCCAGACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPKDRAG*NPRQRS
Trigger: ACTTCTTTGTCTGGGATTCCAACCAGCTCTGTCCTT...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTAACTGGCTGGGATGGTaGTTGAACCAGCAAATTAGC +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFNWLGW*LNQQIS
Trigger: GCTAATTTGCTGGTTCAACCACCATCCCAGCCAGTT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCCAGAGGGTCGTTGATTaGGAGGCTGTTAGCAAACCT +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSQRVVD*EAVSKP
Trigger: AGGTTTGCTAACAGCCTCCCAATCAACGACCCTCTG...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCATGGCAAACTGTGATTaGATCCGATTAAGACAAGCT +
Preference number: 4 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVMANCD*IRLRQA
Trigger: AGCTTGTCTTAATCGGATCCAATCACAGTTTGCCAT...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATTCTGGATTGCTTCGTTaGTTGCGAACTTTAAGAATG +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNSGLLR*LRTLRM
Trigger: CATTCTTAAAGTTCGCAACCAACGAAGCAATCCAGA...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAACTTAAACACCTaGAAACTAGGCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEMNLNT*KLGRGQ
Trigger: CTGCCCCCTGCCTAGTTTCCAGGTGTTTAAGTTCAT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTGGCTTCTCTTTCAGCTaGGGATCGAAGAGTCGTAAC +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASGFSFS*GSKSRN
Trigger: GTTACGACTCTTCGATCCCCAGCTGAAAGAGAAGCC...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCCTGCCAGTCCCGTCTaGAAGCTGTGGTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIPASPV*KLWFFC
Trigger: GCAGAAGAACCACAGCTTCCAGACGGGACTGGCAGG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCAATAATTCATTACGATaGGCGGTGAGGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLNNSLR*AVRREA
Trigger: TGCCTCCCTCCTCACCGCCCATCGTAATGAATTATT...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCATGTGGCTCTCCTGTaGCAGAGACAGCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSHVALL*QRQLRL
Trigger: AAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATG...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAACTCAAAGTCTCAGTGTaGCAAAACTCGGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQLKVSV*QNSGQK
Trigger: TTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAG...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTAGCGGGACACGCCTGTaGAACATTTTGGAAAACATC +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAASGTRL*NILENI
Trigger: GATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTAGCGGGACACGCCTGTaGAACATTTTGGAAAACATC +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFSGTRL*NILENI
Trigger: GATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTCTGGGCTTGCCCAGTaGTTCACAATTCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSSGLAQ*FTILGF
Trigger: AAATCCCAGAATTGTGAATCACTGGGCAAGCCCAGA...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCCTCCTACACACGAAATaGAGCCCAAATCAAACATCA +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPLLHTK*SPNQTS
Trigger: TGATGTTTGATTTGGGCTTCATTTCGTGTGTAGGAG...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTTGGCCTTTCTCCAAGTaGCAAGGACAAATGGATCCA +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASWPFSK*QGQMDP
Trigger: TGGATCCATTTGTCCTTGTCACTTGGAGAAAGGCCA...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGTCGGAGCCACTGCTaGATTATTATTAGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSCRSHC*IIISPS
Trigger: AGACGGGCTAATAATAATGCAGCAGTGGCTCCGACA...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR GCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCTCAACATTCTCATACTaGGAGCCGCTGGCATCCGGC +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCISTFSY*EPLASG
Trigger: GCCGGATGCCAGCGGCTCGCAGTATGAGAATGTTGA...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTATGTTGTCTGGTGGCTaGTCCAGGTTGCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSMLSGG*SRLPGE
Trigger: TTCCCCTGGCAACCTGGAGCAGCCACCAGACAACAT...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAAGTAATCGCTCTGACTaGTCCATCCACTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHESNRSD*SIHFWN
Trigger: GTTCCAAAAGTGGATGGAGCAGTCAGAGCGATTACT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCTCCCCGAAGGCAGAGTaGTCTCTCCTGTATGCGTCA +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCISPKAE*SLLYAS
Trigger: TGACGCATACAGGAGAGAGCACTCTGCCTTCGGGGA...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAATCAATCAGGTTTaGTTCATTGGGCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQEINQV*FIGRLP
Trigger: GGGAAGTCGCCCAATGAAGCAAACCTGATTGATTTC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTTTCCACCTGCTCCACTaGCTCATTCGTGAAATCAAT +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAFHLLH*LIREIN
Trigger: ATTGATTTCACGAATGAGGCAGTGGAGCAGGTGGAA...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTTCCTCCTCTTCCACCTaGTCCACTGCCTCATTCGTG +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSSSSST*STASFV
Trigger: CACGAATGAGGCAGTGGAGCAGGTGGAAGAGGAGGA...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAAGCTCTGGTTCCTGCTaGTCTTCTAGAGTACATGTT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHESSGSC*SSRVHV
Trigger: AACATGTACTCTAGAAGAGCAGCAGGAACCAGAGCT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGGCTGGAAGCGTCTTTaGAACAGGAAAGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFGWKRL*NRKEIH
Trigger: GTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGCC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCAGGTGGACTGCTTTTaGACGAACTGCCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIQVDCF*TNCPVV
Trigger: CACCACTGGGCAGTTCGTCCAAAAGCAGTCCACCTG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTCCTGAGAGCTATCTCTaGCATGTGTGTGAGGAACAA +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASPESYL*HVCEEQ
Trigger: TTGTTCCTCACACACATGCCAGAGATAGCTCTCAGG...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCATTGAGGGGCTCACTTaGCAGAACTTCTTGATTCTG +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLIEGLT*QNFLIL
Trigger: CAGAATCAAGAAGTTCTGCCAAGTGAGCCCCTCAAT...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCAATTCTGGCTCACAGTaGTCTCGTCTGTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSNSGSQ*SRLFHL
Trigger: GAGGTGAAACAGACGAGACCACTGTGAGCCAGAATT...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGGACATCGCCTCTTCTaGAGGCTGAACAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSGHRLF*RLNNRW
Trigger: CCACCTGTTGTTCAGCCTCCAGAAGAGGCGATGTCC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTACGATCCCAGTGACCTaGATCTCCATAATCGTACTG +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASTIPVT*ISIIVL
Trigger: CAGTACGATTATGGAGATCCAGGTCACTGGGATCGT...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAATGTTGTTGTTCAAGTTaGACAAGACCATGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHECCCSS*TRPWRG
Trigger: ACCTCGCCATGGTCTTGTCCAACTTGAACAACAACA...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAATGTTGTTGTTCAAGTTaGACAAGACCATGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQCCCSS*TRPWRG
Trigger: ACCTCGCCATGGTCTTGTCCAACTTGAACAACAACA...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGTCTGGATTGCTTCGTTaGTTGCGAACTTTAAGAATG +
Preference number: 4 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWSGLLR*LRTLRM
Trigger: CATTCTTAAAGTTCGCAACCAACGAAGCAATCCAGA...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTTGGCTGACTGAGTCCTaGCCTGTCCAACTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSWLTES*PVQLLH
Trigger: ATGGAGCAGTTGGACAGGCCAGGACTCAGTCAGCCA...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCAGCTTGCACAGTCTTaGGCATCGAGGTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIQLAQS*ASRLEV
Trigger: CACCTCCAACCTCGATGCCCAAGACTGTGCAAGCTG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTACCAGGTGCTTCCTCTaGCCAATCCTCCCTAGCCTT +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSTRCFL*PILPSL
Trigger: AAGGCTAGGGAGGATTGGCCAGAGGAAGCACCTGGT...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTAATAATTCATTACGATaGGCGGTGAGGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASNNSLR*AVRREA
Trigger: TGCCTCCCTCCTCACCGCCCATCGTAATGAATTATT...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCAGAAAGTGGGTCATGTaGATTGTACCACGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPRKWVM*IVPRKV
Trigger: CACTTTTCGTGGTACAATCCACATGACCCACTTTCT...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCGCCTGTGGAACATTTTaGAAAACATCCTGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSACGTF*KTSWVV
Trigger: GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGC...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTTGAATCAAAAGTCGTaGCAGTCGACCCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSLNQKS*QSTPEQ
Trigger: CTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAA...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCAGCAAATTAGCAGGCTaGTTAGAAACCATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPSKLAG*LETISE
Trigger: TTCCGAAATGGTTTCTAATCAGCCTGCTAATTTGCT...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGGGAAGAGCACTTCCTaGCTTACGATCCTTTTGACT +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAGKSTS*LTILLT
Trigger: AGTCAAAAGGATCGTAAGGCAGGAAGTGCTCTTCCC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGTGCTCTCTCCTGTATaGGTCATACTCTGCATCACA +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAVLSPV*VILCIT
Trigger: TGTGATGCAGAGTATGACGCATACAGGAGAGAGCAC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTGGCTGGAAGCGTCTTTaGAACAGGAAAGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASGWKRL*NRKEIH
Trigger: GTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGCC...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACACTAAGTTCCAGAGCTaGTGTCAAGAAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHTKFQS*CQETVL
Trigger: TAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGT...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAATTCAGGATCCACTCCTaGAATGTAGTGAGGAAGATA +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEFRIHS*NVVRKI
Trigger: TATCTTCCTCACTACATTCCAGGAGTGGATCCTGAA...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACATGGCAAACTGTGATTaGATCCGATTAAGACAAGCT +
Preference number: 4 (lower is better)
Translates to: AVTKASLKNRELMPKEPHMANCD*IRLRQA
Trigger: AGCTTGTCTTAATCGGATCCAATCACAGTTTGCCAT...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCATGAACTTAAACACCTaGAAACTAGGCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAMNLNT*KLGRGQ
Trigger: CTGCCCCCTGCCTAGTTTCCAGGTGTTTAAGTTCAT...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATTTTGTTCTTGTCATCTaGCAAATAAGCTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: YYRPCGSPVAETAPASMNFVLVI*QISFCL
Trigger: AAGACAGAAGCTTATTTGCCAGATGACAAGAACAAA...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTAGAAGGAATTGGGAGTaGCGCGAGTGGAGCGACAAA +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSRRNWE*REWSDK
Trigger: TTTGTCGCTCCACTCGCGCCACTCCCAATTCCTTCT...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCTTACTACCGACCATGTaGCTCTCCTGTGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCILLPTM*LSCGRD
Trigger: GTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAA...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCAGAAAGTGGGTCATGTaGATTGTACCACGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLRKWVM*IVPRKV
Trigger: CACTTTTCGTGGTACAATCCACATGACCCACTTTCT...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCCCCAGGGGAGAAAGTaGGTCATGTGGATTGTACCA +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIPQGRK*VMWIVP
Trigger: TGGTACAATCCACATGACCCACTTTCTCCCCTGGGG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCTTTCCAACTTCTTGCTaGATGAATGTGCCAACCAGC +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAFPTSC*MNVPTS
Trigger: GCTGGTTGGCACATTCATTCAGCAAGAAGTTGGAAA...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCCTGGGCATCTTTCGTaGCCTGCTGATAAAAACGGT +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIPGHLS*PADKNG
Trigger: ACCGTTTTTATCAGCAGGTCACGAAAGATGCCCAGG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTACAGACATGAGGCACTaGAAATTTTTCAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFTDMRH*KFFRRS
Trigger: ACTTCTCCTGAAAAATTTTCAGTGCCTCATGTCTGT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCACAATTCTGGGATTTTaGCTGAATGTACTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPTILGF*LNVLSG
Trigger: TCCTGAAAGTACATTCAGGCAAAATCCCAGAATTGT...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR GCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTACTAAGTTCCAGAGCTaGTGTCAAGAAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFTKFQS*CQETVL
Trigger: TAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTACTAAGTTCCAGAGCTaGTGTCAAGAAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAATKFQS*CQETVL
Trigger: TAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTAAGCTGTGGTTCTTCTaGATCTGGGGTTGGCACGAA +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSKLWFF*IWGWHE
Trigger: TTCGTGCCAACCCCAGATGCAGAAGAACCACAGCTT...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCTCTACTAAAAGCAAATaGATCCGTGACCGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKASTKSK*IRDRLQ
Trigger: TTGCAGCCGGTCACGGATCCATTTGCTTTTAGTAGA...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTTTCTGCTGCTATAGCTaGATGACACGCTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSFCCYS*MTRCQG
Trigger: ACCCTGACAGCGTGTCATCCAGCTATAGCAGCAGAA...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATCCTTTTGACTTTCTaGAACCAAGTTCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RSASSFLNSESNRAPTHEILLTF*NQVLWN
Trigger: GTTCCAGAGAACTTGGTTCCAGAAAGTCAAAAGGAT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTCATAATCGTACTGGCTaGAGTAATAGCTTGCATAGT +
Preference number: 4 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFHNRTG*SNSLHS
Trigger: ACTATGCAAGCTATTACTCCAGCCAGTACGATTATG...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCAAGAATGGCAAACTGTaGTTGGATCCGATTAAGACA +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSKNGKL*LDPIKT
Trigger: TGTCTTAATCGGATCCAATCACAGTTTGCCATTCTT...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCTTTCCATCCAGAATCTaGAAGGATGGTGGAATTAAT +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLFPSRI*KDGGIN
Trigger: ATTAATTCCACCATCCTTTCAGATTCTGGATGGAAA...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCCTCCTACACACGAAATaGAGCCCAAATCAAACATCA +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKALLHTK*SPNQTS
Trigger: TGATGTTTGATTTGGGCTTCATTTCGTGTGTAGGAG...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCTGGAGGAAGCTTCTTaGATCAAAAGTCGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCILEEAS*IKSRGS
Trigger: ACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGATACTCTCCCCAAGTaGTACCAACCTCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSDTLPK*YQPLNQ
Trigger: TTGGTTCAGAGGTTGGTAGCACTTGGGGAGAGTATC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCGATACTCTCCCCAAGTaGTACCAACCTCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIDTLPK*YQPLNQ
Trigger: TTGGTTCAGAGGTTGGTAGCACTTGGGGAGAGTATC...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCTGAGCAATCAAGACTaGAGGATTCTGCAGAGACTC +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCILSNQD*RILQRL
Trigger: GAGTCTCTGCAGAATCCTCCAGTCTTGATTGCTCAG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTATCCTTTTGACTTTCTaGAACCAAGTTCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASILLTF*NQVLWN
Trigger: GTTCCAGAGAACTTGGTTCCAGAAAGTCAAAAGGAT...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTCATAATCGTACTGGCTaGAGTAATAGCTTGCATAGT +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASHNRTG*SNSLHS
Trigger: ACTATGCAAGCTATTACTCCAGCCAGTACGATTATG...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCTTTGTTCTTGTCATCTaGCAAATAAGCTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPFVLVI*QISFCL
Trigger: AAGACAGAAGCTTATTTGCCAGATGACAAGAACAAA...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTAATAATTCATTACGATaGGCGGTGAGGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSNNSLR*AVRREA
Trigger: TGCCTCCCTCCTCACCGCCCATCGTAATGAATTATT...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCAGAAAGTGGGTCATGTaGATTGTACCACGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKARKWVM*IVPRKV
Trigger: CACTTTTCGTGGTACAATCCACATGACCCACTTTCT...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCTTGAATCAAAAGTCGTaGCAGTCGACCCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCILNQKS*QSTPEQ
Trigger: CTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAA...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTTGGTTCTTCTGCATCTaGGGTTGGCACGAACAAGTT +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSWFFCI*GWHEQV
Trigger: AACTTGTTCGTGCCAACCCCAGATGCAGAAGAACCA...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCAGCAAATTAGCAGGCTaGTTAGAAACCATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKASKLAG*LETISE
Trigger: TTCCGAAATGGTTTCTAATCAGCCTGCTAATTTGCT...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR TCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCACTGCCTCATTCGTaGAATCAATCAGGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSPLPHS*NQSGLL
Trigger: AAGCAAACCTGATTGATTTCACGAATGAGGCAGTGG...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTTTCCATCCAGAATCTaGAAGGATGGTGGAATTAAT +
Preference number: 4 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSFPSRI*KDGGIN
Trigger: ATTAATTCCACCATCCTTTCAGATTCTGGATGGAAA...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTTTTCCATCCAGAATCTaGAAGGATGGTGGAATTAAT +
Preference number: 4 (lower is better)
Translates to: AGSVFATGKKFTAVTKASFPSRI*KDGGIN
Trigger: ATTAATTCCACCATCCTTTCAGATTCTGGATGGAAA...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCTGTTGTTGTTCAAGTTaGACAAGACCATGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCICCCSS*TRPWRG
Trigger: ACCTCGCCATGGTCTTGTCCAACTTGAACAACAACA...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCTTTGTTCTTGTCATCTaGCAAATAAGCTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: ELLSRNCVKILSPSATNLFVLVI*QISFCL
Trigger: AAGACAGAAGCTTATTTGCCAGATGACAAGAACAAA...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTTTTGTTCTTGTCATCTaGCAAATAAGCTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAFVLVI*QISFCL
Trigger: AAGACAGAAGCTTATTTGCCAGATGACAAGAACAAA...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCTCCTACACACGAAATaGAGCCCAAATCAAACATCA +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSLLHTK*SPNQTS
Trigger: TGATGTTTGATTTGGGCTTCATTTCGTGTGTAGGAG...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCAAGAATGGCAAACTGTaGTTGGATCCGATTAAGACA +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIKNGKL*LDPIKT
Trigger: TGTCTTAATCGGATCCAATCACAGTTTGCCATTCTT...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR GCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCACTAAGTTCCAGAGCTaGTGTCAAGAAACTGTGTTA +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCITKFQS*CQETVL
Trigger: TAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGT...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCATCCTTTTGACTTTCTaGAACCAAGTTCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIILLTF*NQVLWN
Trigger: GTTCCAGAGAACTTGGTTCCAGAAAGTCAAAAGGAT...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CCA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTTCTGGATTGCTTCGTTaGTTGCGAACTTTAAGAATG +
Preference number: 4 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSSGLLR*LRTLRM
Trigger: CATTCTTAAAGTTCGCAACCAACGAAGCAATCCAGA...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR TCA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCTTTCCATCCAGAATCTaGAAGGATGGTGGAATTAAT +
Preference number: 4 (lower is better)
Translates to: DKNTKSFRTVREALKLCIFPSRI*KDGGIN
Trigger: ATTAATTCCACCATCCTTTCAGATTCTGGATGGAAA...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS GCA 90 bp AGCGTCTGCGGAGCTGAGGGCAGCAGCCGCACGCTCGGGCTCGAGTaGTCAGGGCTCGGTGCAGGCACCGCCAGCAGAGGGTTGGCGATC +
Preference number: 5 (lower is better)
Translates to: SVCGAEGSSRTLGLE*SGLGAGTASRGLAI
Trigger: GATCGCCAACCCTCTGCTGGCGGTGCCTGCACCGAGCCCTGAGCACTCGAGCCCGAGCGTGCGGCTGCTGCCCTCAGCTCCGCAGACGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 90 bp CTGAGCAGGGTTGTAGAAGGGCATGGCCCCGCTGGGAGGGCCCCCTaGAGCAGGGAGGTCGCCAGGAGCCTCTCCTCCCTGGGAACCCTC +
Preference number: 5 (lower is better)
Translates to: LSRVVEGHGPAGRAP*SREVARSLSSLGTL
Trigger: GAGGGTTCCCAGGGAGGAGAGGCTCCTGGCGACCTCCCTGCTGCAGGGGGCCCTCCCAGCGGGGCCATGCCCTTCTACAACCCTGCTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453963.5
CDS CCA 90 bp AGGGCTGCTAGCCCAGAACACGCTCCGAGGATTCCCGGCTGGAGGTaGCCCAGCCATGCCAGACGGGACCGTCTGGGGCGGTGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: RAASPEHAPRIPGWR*PSHARRDRLGRWLH
Trigger: ATGCAGCCACCGCCCCAGACGGTCCCGTCTGGCATGGCTGGGCCACCTCCAGCCGGGAATCCTCGGAGCGTGTTCTGGGCTAGCAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CCA 90 bp CTTGCCTGGGAGGTGGCCGTTCCGAGGAGTGGCTGGCTCGGGAGCTaGGCCGCTCGGGCTCGGGATAGCGGTAGTTCTGGGCGTAAGCAG +
Preference number: 5 (lower is better)
Translates to: LAWEVAVPRSGWLGS*AARARDSGSSGRKQ
Trigger: CTGCTTACGCCCAGAACTACCGCTATCCCGAGCCCGAGCGGCCCAGCTCCCGAGCCAGCCACTCCTCGGAACGGCCACCTCCCAGGCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS-3UTR CAA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCACCGGGGCCGCCGAGCTaGGGTTCCGTGACTGCTGCC +
Preference number: 5 (lower is better)
Translates to: EVPGFTRADRGTERAAPSPGPPS*GSVTAA
Trigger: GGCAGCAGTCACGGAACCCAAGCTCGGCGGCCCCGG...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS CCA 90 bp GTACAAAGGCCGGTAGTAGTAGTAGGCGGCCAGGTCCTGAGGCGGTaGGCCGGGGGCAAGTGCAGGCACTGGCTGTGGCCACGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: VQRPVVVVGGQVLRR*AGGKCRHWLWPRLL
Trigger: GAGCAGCCGTGGCCACAGCCAGTGCCTGCACTTGCCCCCGGCCCACCGCCTCAGGACCTGGCCGCCTACTACTACTACCGGCCTTTGTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS-3UTR CAA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCGGGGCCGCCGAGCTaGGGTTCCGTGACTGCTGCC +
Preference number: 5 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLPGPPS*GSVTAA
Trigger: GGCAGCAGTCACGGAACCCAAGCTCGGCGGCCCCGG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGCCGGGGCCGCCGAGCTaGGGTTCCGTGACTGCTGCC +
Preference number: 5 (lower is better)
Translates to: GSSEALIENTAPSTHSARPGPPS*GSVTAA
Trigger: GGCAGCAGTCACGGAACCCAAGCTCGGCGGCCCCGG...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCAATCCTCCCTAGCCTaGAGCTCCCGGAGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVQSSLA*SSRRWR
Trigger: GCGCCACCTCCGGGAGCTCAAGGCTAGGGAGGATTG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS GCA 90 bp TGTGTGCGCTGTGCAGGCTCCGTGCCGAGTGCTCGCTGTGGACGCTaGGCCGGTCCACCTCTTCCCCATAAGGGTCTCTGTGCGGATCGG +
Preference number: 5 (lower is better)
Translates to: CVRCAGSVPSARCGR*AGPPLPHKGLCADR
Trigger: CCGATCCGCACAGAGACCCTTATGGGGAAGAGGTGGACCGGCGCAGCGTCCACAGCGAGCACTCGGCACGGAGCCTGCACAGCGCACACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS-3UTR CAA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTCGCCCCAGGCCCAGATaGTCTGGGATGACTGGCAAC +
Preference number: 5 (lower is better)
Translates to: GLLPSDWATRWAVPSALGRPRPR*SGMTGN
Trigger: GTTGCCAGTCATCCCAGACAATCTGGGCCTGGGGCG...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCTCCGCTGGGTCCCGCTaGGGTTCAGGACGTCAACGT +
Preference number: 5 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVSAGSR*GSGRQR
Trigger: ACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGGA...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCAGGTCGCCAGGAGCCTaGGGCTCTGGGGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSRSPGA*GSGAGS
Trigger: AGAGCCTGCCCCAGAGCCCAAGGCTCCTGGCGACCT...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000371706.7
CDS TCA 90 bp AATGCCACCTCGGCTCTGCACCGGGGCCGCCGAGCTTGGGTTCCGTaGCTGCTGCCCGGACATCGCCTCTTCTGGAGGCTGAACAACAGG +
Preference number: 5 (lower is better)
Translates to: NATSALHRGRRAWVP*LLPGHRLFWRLNNR
Trigger: CCTGTTGTTCAGCCTCCAGAAGAGGCGATGTCCGGGCAGCAGTCACGGAACCCAAGCTCGGCGGCCCCGGTGCAGAGCCGAGGTGGCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS TCA 90 bp CGGTCTCTCTCTCGAGCGAGCTGGCGGCAGCCGCCGGACCACCAGTaGGGAAAGAGAGCTGGGCCTCACCAGACTCCTCCTCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: RSLSRASWRQPPDHQ*GKRAGPHQTPPLPP
Trigger: AGGTGGAAGAGGAGGAGTCTGGTGAGGCCCAGCTCTCTTTCCTCACTGGTGGTCCGGCGGCTGCCGCCAGCTCGCTCGAGAGAGAGACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 90 bp GTGTCGTCTTTGGCCAGGGGTCCCGGGAACGCCCGCATCTCCTCCTaGTCAGACGTGTGCTGCAGCAAGGCCTCCATGCTGTGGACCTCC +
Preference number: 5 (lower is better)
Translates to: VSSLARGPGNARISS*SDVCCSKASMLWTS
Trigger: GGAGGTCCACAGCATGGAGGCCTTGCTGCAGCACACGTCTGAGCAGGAGGAGATGCGGGCGTTCCCGGGACCCCTGGCCAAAGACGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 90 bp CTGAGCAGGGTTGTAGAAGGGCATGGCCCCGCTGGGAGGGCCCCCTaGAGCAGGGAGGTCGCCAGGAGCCTGAGAAGCACAGAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: LSRVVEGHGPAGRAP*SREVARSLRSTEKS
Trigger: TGACTTCTCTGTGCTTCTCAGGCTCCTGGCGACCTCCCTGCTGCAGGGGGCCCTCCCAGCGGGGCCATGCCCTTCTACAACCCTGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467838.2
CDS CCA 90 bp GGATTCCCGGCTGGAGGTGGCCCAGCCATGCCAGACGGGACCGTCTaGGGCGGTGGCTGCATGACTGAACCCTTGCACAAGTCGATGCTG +
Preference number: 5 (lower is better)
Translates to: GFPAGGGPAMPDGTV*GGGCMTEPLHKSML
Trigger: CAGCATCGACTTGTGCAAGGGTTCAGTCATGCAGCCACCGCCCCAGACGGTCCCGTCTGGCATGGCTGGGCCACCTCCAGCCGGGAATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CCA 90 bp TTCCTGGAGCAAGTGTCTCCTTTCCTGCAGAGGTGGCACACCAGGTaGGAGGCCAGGCCCGGAGGGCTCCAGGAAGCCAAGTGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FLEQVSPFLQRWHTR*EARPGGLQEAKCRP
Trigger: GGGCCTGCACTTGGCTTCCTGGAGCCCTCCGGGCCTGGCCTCCCACCTGGTGTGCCACCTCTGCAGGAAAGGAGACACTTGCTCCAGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS-3UTR CAA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGCGCCCACAGAGTCGTaGCTGGGCTCTCACACTTCA +
Preference number: 5 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVAPTES*LGSHTS
Trigger: TGAAGTGTGAGAGCCCAGCAACGACTCTGTGGGCGC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCATCCAAGAGGCCCCTaGAAGCCAGAGTGTCGCCCA +
Preference number: 5 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVHPRGP*KPECRP
Trigger: TGGGCGACACTCTGGCTTCAAGGGGCCTCTTGGATG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGACCGCCAGCAGAGGGTaGGCGATCCCCAGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLTASRG*AIPRAP
Trigger: AGGAGCCCTGGGGATCGCCAACCCTCTGCTGGCGGT...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGACCGCCAGCAGAGGGTaGGCGATCCCCAGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGTASRG*AIPRAP
Trigger: AGGAGCCCTGGGGATCGCCAACCCTCTGCTGGCGGT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGACCGCCAGCAGAGGGTaGGCGATCCCCAGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: GSSEALIENTAPSTHSARTASRG*AIPRAP
Trigger: AGGAGCCCTGGGGATCGCCAACCCTCTGCTGGCGGT...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAACCGCCAGCAGAGGGTaGGCGATCCCCAGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATTASRG*AIPRAP
Trigger: AGGAGCCCTGGGGATCGCCAACCCTCTGCTGGCGGT...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTCCTGTCCGGGTCTCTTaGTTTCGGGAGCGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: GLLPSDWATRWAVPSALGPVRVS*FRERVR
Trigger: TCTCACCCGCTCCCGAAACAAAGAGACCCGGACAGG...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCGGCAGGCGGGGCAGCTaGCACAGTCTTGGGCATCGA +
Preference number: 5 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSGRRGS*HSLGHR
Trigger: TCGATGCCCAAGACTGTGCAAGCTGCCCCGCCTGCC...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCGGCAGGCGGGGCAGCTaGCACAGTCTTGGGCATCGA +
Preference number: 5 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAGRRGS*HSLGHR
Trigger: TCGATGCCCAAGACTGTGCAAGCTGCCCCGCCTGCC...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCAGGTCGCCAGGAGCCTaGGGCTCTGGGGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVRSPGA*GSGAGS
Trigger: AGAGCCTGCCCCAGAGCCCAAGGCTCCTGGCGACCT...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000371706.7
CDS-3UTR CAA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCCAATCCTCCCTAGCCTaGAGCTCCCGGAGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAQSSLA*SSRRWR
Trigger: GCGCCACCTCCGGGAGCTCAAGGCTAGGGAGGATTG...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS GCA 90 bp GGAGGATTCTCAAGGTTCTCAGAAGCACCAATGCCACCTCGGCTCTaGACCGGGGCCGCCGAGCTTGGGTTCCGTGACTGCTGCCCGGAC +
Preference number: 5 (lower is better)
Translates to: GGFSRFSEAPMPPRL*TGAAELGFRDCCPD
Trigger: GTCCGGGCAGCAGTCACGGAACCCAAGCTCGGCGGCCCCGGTGCAGAGCCGAGGTGGCATTGGTGCTTCTGAGAACCTTGAGAATCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 90 bp GGAACATACTTGGCCAGGGGTCCCGGGAACGCCCGCATCTCCTCCTaGTCAGACGTGTGCTGCAGCAAGGCCTCCATGCTGTGGACCTCC +
Preference number: 5 (lower is better)
Translates to: GTYLARGPGNARISS*SDVCCSKASMLWTS
Trigger: GGAGGTCCACAGCATGGAGGCCTTGCTGCAGCACACGTCTGAGCAGGAGGAGATGCGGGCGTTCCCGGGACCCCTGGCCAAGTATGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472305.1
CDS CCA 90 bp AAAGTCCGCAGGAGCGAGAGCCGGCTCGCTCCGCTGGGTCCCGCTTaGGTTCAGGACGTCAACGTAGCGAGCTCTGGTTCCTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: KVRRSESRLAPLGPA*VQDVNVASSGSCCS
Trigger: AGAGCAGCAGGAACCAGAGCTCGCTACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGGAGCGAGCCGGCTCTCGCTCCTGCGGACTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS-3UTR CAA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTCAGGTGGCTTCCACTTaGCAAGTGGCTCACCTCGTC +
Preference number: 5 (lower is better)
Translates to: GLLPSDWATRWAVPSALGQVAST*QVAHLV
Trigger: GACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCTG...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGCAGCTTGCACAGTCTaGGGCATCGAGGTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: GLLPSDWATRWAVPSALGAACTV*GIEVGG
Trigger: ACCTCCAACCTCGATGCCCAAGACTGTGCAAGCTGC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGGCAGGCGGGGCAGCTaGCACAGTCTTGGGCATCGA +
Preference number: 5 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVGRRGS*HSLGHR
Trigger: TCGATGCCCAAGACTGTGCAAGCTGCCCCGCCTGCC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCAATCCTCCCTAGCCTaGAGCTCCCGGAGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGQSSLA*SSRRWR
Trigger: GCGCCACCTCCGGGAGCTCAAGGCTAGGGAGGATTG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCAATCCTCCCTAGCCTaGAGCTCCCGGAGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADQSSLA*SSRRWR
Trigger: GCGCCACCTCCGGGAGCTCAAGGCTAGGGAGGATTG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS TCA 90 bp TCGGAACTCGGAGTGCCAGGACACTGCTGCGGGAGGGCTCCATCCTaGTGCCATACTCCAGCCCCCTCCTTAATCTGCCGCTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: SELGVPGHCCGRAPS*CHTPAPSLICRSTC
Trigger: GCAGGTGGAGCGGCAGATTAAGGAGGGGGCTGGAGTATGGCATCAGGATGGAGCCCTCCCGCAGCAGTGTCCTGGCACTCCGAGTTCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 90 bp CTATCTCCCCGGGCGAGGGGGTTCACAAGAGCAGAGGCGGGCCGGTaGTCATTCTTCACTCCTGGATTCTGCCTGAGCTCTGGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: LSPRARGFTRAEAGR*SFFTPGFCLSSGLA
Trigger: GGCAAGCCCAGAGCTCAGGCAGAATCCAGGAGTGAAGAATGAGCACCGGCCCGCCTCTGCTCTTGTGAACCCCCTCGCCCGGGGAGATAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp GGCTGTGTTGCTCATGACCAGGGCCCTGATGTAGGATGGACGGGGTaGGGAAATGAGGAACGCTGGTGGCACAGGGCACCCCGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: GCVAHDQGPDVGWTG*GNEERWWHRAPRWE
Trigger: TTCCCAGCGGGGTGCCCTGTGCCACCAGCGTTCCTCATTTCCCCACCCCGTCCATCCTACATCAGGGCCCTGGTCATGAGCAACACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp CCACCAGAGGGCTGTGTTGCTCATGACCAGGGCCCTGATGTAGGATaGACGGGGTGGGGAAATGAGGAACGCTGGTGGCACAGGGCACCC +
Preference number: 5 (lower is better)
Translates to: PPEGCVAHDQGPDVG*TGWGNEERWWHRAP
Trigger: GGGTGCCCTGTGCCACCAGCGTTCCTCATTTCCCCACCCCGTCCATCCTACATCAGGGCCCTGGTCATGAGCAACACAGCCCTCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp TTGCAAGTGGCTCACCTCGTCTCTTCCGTCACTGGGCAAGGCTGCTaGGGGAGCCACCAGAGGGCTGTGTTGCTCATGACCAGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LQVAHLVSSVTGQGC*GSHQRAVLLMTRAL
Trigger: CAGGGCCCTGGTCATGAGCAACACAGCCCTCTGGTGGCTCCCCCAGCAGCCTTGCCCAGTGACGGAAGAGACGAGGTGAGCCACTTGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS-3UTR CAA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAACCGTCATGTGGGTTTaGCCTGCTCAGGGGTCGGTC +
Preference number: 5 (lower is better)
Translates to: LLPSDWATRWAVPSALGTTVMWV*PAQGSV
Trigger: GACCGACCCCTGAGCAGGCAAAACCCACATGACGGT...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGGCGCCCACAGAGTCGTaGCTGGGCTCTCACACTTCA +
Preference number: 5 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQAPTES*LGSHTS
Trigger: TGAAGTGTGAGAGCCCAGCAACGACTCTGTGGGCGC...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGGGGCCAGAAGGACGTaGCCTCCAAAATCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: EVPGFTRADRGTERAAPSGARRT*PPKSGS
Trigger: GCTGCCAGATTTTGGAGGCAACGTCCTTCTGGCCCC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTCAGGTGGCTGAGGTTTaGCACACACATAAAGCGCCG +
Preference number: 5 (lower is better)
Translates to: GLLPSDWATRWAVPSALGQVAEV*HTHKAP
Trigger: CGGCGCTTTATGTGTGTGCAAAACCTCAGCCACCTG...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACACGCCCCAGGCCCAGATaGTCTGGGATGACTGGCAAC +
Preference number: 5 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATRPRPR*SGMTGN
Trigger: GTTGCCAGTCATCCCAGACAATCTGGGCCTGGGGCG...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGGATCGTACCTCCAGTaGTTGTCACGTTTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVGSYLQ*LSRFSG
Trigger: GCCCGAGAAACGTGACAACAACTGGAGGTACGATCC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCATTATGGGTGTCGTCTTaGGCCAGGGGTCCCGGGAAC +
Preference number: 5 (lower is better)
Translates to: EVPGFTRADRGTERAAPSLWVSS*ARGPGN
Trigger: GTTCCCGGGACCCCTGGCCAAAGACGACACCCATAA...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTTATGGGTGTCGTCTTaGGCCAGGGGTCCCGGGAAC +
Preference number: 5 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSALWVSS*ARGPGN
Trigger: GTTCCCGGGACCCCTGGCCAAAGACGACACCCATAA...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATACCGCCAGCAGAGGGTaGGCGATCCCCAGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: TGPHGGQSPALWVHKITHTASRG*AIPRAP
Trigger: AGGAGCCCTGGGGATCGCCAACCCTCTGCTGGCGGT...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCCCTGTCCGGGTCTCTTaGTTTCGGGAGCGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSPVRVS*FRERVR
Trigger: TCTCACCCGCTCCCGAAACAAAGAGACCCGGACAGG...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGTCCGCTGGGTCCCGCTaGGGTTCAGGACGTCAACGT +
Preference number: 5 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLSAGSR*GSGRQR
Trigger: ACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGGA...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS TCA 90 bp AGTCGTTGCTGGGCTCTCACACTTCACGGGCCCCTGGGTCCTGGCTaGAGGCCTCTTCTCGGGTGCTGGATACACAGTATCCAAGGGCGG +
Preference number: 5 (lower is better)
Translates to: SRCWALTLHGPLGPG*RPLLGCWIHSIQGR
Trigger: CCGCCCTTGGATACTGTGTATCCAGCACCCGAGAAGAGGCCTTCAGCCAGGACCCAGGGGCCCGTGAAGTGTGAGAGCCCAGCAACGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS TCA 90 bp CCTGCCAGTCCCGTCTGGAAGCTGTGGTTCTTCTGCATCTGGGGATaGGAGAGCGAGGAGGCCATCATTCCGTCCCGAACGTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: PASPVWKLWFFCIWG*ESEEAIIPSRTSLG
Trigger: CCCCAGGGACGTTCGGGACGGAATGATGGCCTCCTCGCTCTCTCATCCCCAGATGCAGAAGAACCACAGCTTCCAGACGGGACTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313084.9
CDS GCA 90 bp ACTTTGCAAGTGGCTCACCTCGTCTCTTCCGTCACTGGGCAAGGCTaGTGGGGGAGCCACCAGAGGGCTGTGTTGCTCATGACCAGGGCC +
Preference number: 5 (lower is better)
Translates to: TLQVAHLVSSVTGQG*WGSHQRAVLLMTRA
Trigger: GGCCCTGGTCATGAGCAACACAGCCCTCTGGTGGCTCCCCCAGCAGCCTTGCCCAGTGACGGAAGAGACGAGGTGAGCCACTTGCAAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 90 bp GCAGGGGCCAGAAGGACGTTGCCTCCAAAATCTGGCAGCTCACTTTaGGCCCACAGAGTCGTTGCTGGGCTCTCACACTTCACGGGCCCC +
Preference number: 5 (lower is better)
Translates to: AGARRTLPPKSGSSL*AHRVVAGLSHFTGP
Trigger: GGGGCCCGTGAAGTGTGAGAGCCCAGCAACGACTCTGTGGGCGCAAAGTGAGCTGCCAGATTTTGGAGGCAACGTCCTTCTGGCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp TGCGCCCACAGAGTCGTTGCTGGGCTCTCACACTTCACGGGCCCCTaGGTCCTGGCTGAAGGCCTCTTCTCGGGTGCTGGATACACAGTA +
Preference number: 5 (lower is better)
Translates to: CAHRVVAGLSHFTGP*VLAEGLFSGAGYTV
Trigger: TACTGTGTATCCAGCACCCGAGAAGAGGCCTTCAGCCAGGACCCAGGGGCCCGTGAAGTGTGAGAGCCCAGCAACGACTCTGTGGGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp TTGCTCCATGGCAGGCCAGACGGTGTCGGCAGGGTAGCCATACTCTaGGAAGCCGGGGCCACTGCTGAAATTGCTGCGGTAGGTGCCGTA +
Preference number: 5 (lower is better)
Translates to: LLHGRPDGVGRVAIL*EAGATAEIAAVGAV
Trigger: TACGGCACCTACCGCAGCAATTTCAGCAGTGGCCCCGGCTTCCCAGAGTATGGCTACCCTGCCGACACCGTCTGGCCTGCCATGGAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 90 bp ACACCGGGGAATACAGGTGCGGCTGCGTCAGGATGCTCTTCGCGATaGCCTCACAGTAGTGGAAGGCTTGCGTGGCCAGCCCCATTTCCG +
Preference number: 5 (lower is better)
Translates to: TPGNTGAAASGCSSR*PHSSGRLAWPAPFP
Trigger: CGGAAATGGGGCTGGCCACGCAAGCCTTCCACTACTGTGAGGCCATCGCGAAGAGCATCCTGACGCAGCCGCACCTGTATTCCCCGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 90 bp TGGGGTTGGCACGAACAAGTTAGAAGGAATTGGGAGTGGCGCGAGTaGAGCGACAAAGTCCGCAGGAGCGAGAGCCGGCTCGCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: WGWHEQVRRNWEWRE*SDKVRRSESRLAPL
Trigger: CAGCGGAGCGAGCCGGCTCTCGCTCCTGCGGACTTTGTCGCTCCACTCGCGCCACTCCCAATTCCTTCTAACTTGTTCGTGCCAACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS-3UTR CAA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCACCGTCATGTGGGTTTaGCCTGCTCAGGGGTCGGTC +
Preference number: 5 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGTVMWV*PAQGSV
Trigger: GACCGACCCCTGAGCAGGCAAAACCCACATGACGGT...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTATCAGGTTTGCTTCATaGGGCGACTTCCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: GLLPSDWATRWAVPSALGIRFAS*GDFPGS
Trigger: GCTTCCTGGGAAGTCGCCCAATGAAGCAAACCTGAT...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGGCTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTGGCTGTCCATCTTACTaGCAAGTAGCAGAGCGTGAC +
Preference number: 5 (lower is better)
Translates to: GLLPSDWATRWAVPSALGGCPSY*QVAERD
Trigger: GTCACGCTCTGCTACTTGCAAGTAAGATGGACAGCC...ACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCATCCAAGAGGCCCCTaGAAGCCAGAGTGTCGCCCA +
Preference number: 5 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGHPRGP*KPECRP
Trigger: TGGGCGACACTCTGGCTTCAAGGGGCCTCTTGGATG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCGCAGCTTGCACAGTCTaGGGCATCGAGGTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSAACTV*GIEVGG
Trigger: ACCTCCAACCTCGATGCCCAAGACTGTGCAAGCTGC...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCGCAGCTTGCACAGTCTaGGGCATCGAGGTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAAACTV*GIEVGG
Trigger: ACCTCCAACCTCGATGCCCAAGACTGTGCAAGCTGC...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGCAGGCGGGGCAGCTaGCACAGTCTTGGGCATCGA +
Preference number: 5 (lower is better)
Translates to: STHSARFKHGEGPDGAEQGRRGS*HSLGHR
Trigger: TCGATGCCCAAGACTGTGCAAGCTGCCCCGCCTGCC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCAGGCCCGTCTCTGAGTaGAACAGGGTTGAGTCCACC +
Preference number: 5 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSARPVSE*NRVEST
Trigger: GGTGGACTCAACCCTGTTCAACTCAGAGACGGGCCT...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAAGGCCCGTCTCTGAGTaGAACAGGGTTGAGTCCACC +
Preference number: 5 (lower is better)
Translates to: LLPSDWATRWAVPSALGTRPVSE*NRVEST
Trigger: GGTGGACTCAACCCTGTTCAACTCAGAGACGGGCCT...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCAGGCCCGTCTCTGAGTaGAACAGGGTTGAGTCCACC +
Preference number: 5 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSRPVSE*NRVEST
Trigger: GGTGGACTCAACCCTGTTCAACTCAGAGACGGGCCT...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS TCA 90 bp GTGGCCCAGCCATGCCAGACGGGACCGTCTGGGGCGGTGGCTGCATaGCTGAACCCTTGCACAAGTCGATGCTGCTTACAGAAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: VAQPCQTGPSGAVAA*LNPCTSRCCLQKEA
Trigger: TGCTTCCTTCTGTAAGCAGCATCGACTTGTGCAAGGGTTCAGTCATGCAGCCACCGCCCCAGACGGTCCCGTCTGGCATGGCTGGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS TCA 90 bp CGGTGTCGGCAGGGTAGCCATACTCTGGGAAGCCGGGGCCACTGCTaGAATTGCTGCGGTAGGTGCCGTAGGCAAAATCGCCGTGAAAGG +
Preference number: 5 (lower is better)
Translates to: RCRQGSHTLGSRGHC*NCCGRCRRQNRRER
Trigger: CCTTTCACGGCGATTTTGCCTACGGCACCTACCGCAGCAATTTCAGCAGTGGCCCCGGCTTCCCAGAGTATGGCTACCCTGCCGACACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS TCA 90 bp CAGACTCCAAAGCATCCTTCTTACGGCCATACAGCAACAGCTCCCTaGACCTCTCGGTCTCTCTCTCGAGCGAGCTGGCGGCAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: QTPKHPSYGHTATAP*TSRSLSRASWRQPP
Trigger: CGGCGGCTGCCGCCAGCTCGCTCGAGAGAGAGACCGAGAGGTTCAGGGAGCTGTTGCTGTATGGCCGTAAGAAGGATGCTTTGGAGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 90 bp CACAGCTTCCGTGGTGGAGTTAAGAGGCAGGGGACAGACCTGGGGTaGACAGAGGGTCTCCATGTTGTCTGGTGGCTGCTCCAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: HSFRGGVKRQGTDLG*TEGLHVVWWLLQVA
Trigger: GGCAACCTGGAGCAGCCACCAGACAACATGGAGACCCTCTGTGCACCCCAGGTCTGTCCCCTGCCTCTTAACTCCACCACGGAAGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 90 bp GGATACACAGTATCCAAGGGCGGTGCCCCTGCGTGCGGAAGCATGTaGACAGCTTCCGTGGTGGAGTTAAGAGGCAGGGGACAGACCTGG +
Preference number: 5 (lower is better)
Translates to: GYTVSKGGAPACGSM*TASVVELRGRGQTW
Trigger: CCAGGTCTGTCCCCTGCCTCTTAACTCCACCACGGAAGCTGTGCACATGCTTCCGCACGCAGGGGCACCGCCCTTGGATACTGTGTATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 90 bp CCTCTCCCATTTTGGGAGGATTCTCAAGGTTCTCAGAAGCACCAATaGCACCTCGGCTCTGCACCGGGGCCGCCGAGCTTGGGTTCCGTG +
Preference number: 5 (lower is better)
Translates to: PLPFWEDSQGSQKHQ*HLGSAPGPPSLGSV
Trigger: CACGGAACCCAAGCTCGGCGGCCCCGGTGCAGAGCCGAGGTGGCATTGGTGCTTCTGAGAACCTTGAGAATCCTCCCAAAATGGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp TCCGAAAACATGGCTTTGGGTAGTTGTGGGGGAGAAGCCTGTTGCTaGGGTGGCACCAGCTCCTGCTGGGCTCTTTCGAGGCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SENMALGSCGGEACC*GGTSSCWALSRPGW
Trigger: CCAGCCTGGCCTCGAAAGAGCCCAGCAGGAGCTGGTGCCACCCCAGCAACAGGCTTCTCCCCCACAACTACCCAAAGCCATGTTTTCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp ATTGCTGCGGTAGGTGCCGTAGGCAAAATCGCCGTGAAAGGAGCCTaGAGGAAGCGGGGCCTCGTAGGAACCGGCAGCCACATTGTGGCT +
Preference number: 5 (lower is better)
Translates to: IAAVGAVGKIAVKGA*RKRGLVGTGSHIVA
Trigger: AGCCACAATGTGGCTGCCGGTTCCTACGAGGCCCCGCTTCCTCCAGGCTCCTTTCACGGCGATTTTGCCTACGGCACCTACCGCAGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS-3UTR CAA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCCAGGTGGCTTCCACTTaGCAAGTGGCTCACCTCGTC +
Preference number: 5 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGQVAST*QVAHLV
Trigger: GACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCTG...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCACAGGTGGCTGAGGTTTaGCACACACATAAAGCGCCG +
Preference number: 5 (lower is better)
Translates to: EVPGFTRADRGTERAAPSQVAEV*HTHKAP
Trigger: CGGCGCTTTATGTGTGTGCAAAACCTCAGCCACCTG...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGTCCTTCAGGATATCCTaGCCTGGGAGGTGGCCGTTC +
Preference number: 5 (lower is better)
Translates to: GSSEALIENTAPSTHSARSFRIS*PGRWPF
Trigger: GAACGGCCACCTCCCAGGCAAGGATATCCTGAAGGA...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAGTCTGCAGAGGGTCGTaGATTGGGAGGCTGTTAGCA +
Preference number: 5 (lower is better)
Translates to: EVPGFTRADRGTERAAPSVCRGS*IGRLLA
Trigger: TGCTAACAGCCTCCCAATCAACGACCCTCTGCAGAC...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGGTCTGCAGAGGGTCGTaGATTGGGAGGCTGTTAGCA +
Preference number: 5 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQVCRGS*IGRLLA
Trigger: TGCTAACAGCCTCCCAATCAACGACCCTCTGCAGAC...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGTCCTTCGTTTCTTTCTaGGCTGCCTGTCCGGGTCTC +
Preference number: 5 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTSFVSF*AACPGL
Trigger: GAGACCCGGACAGGCAGCCAAGAAAGAAACGAAGGA...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGCAGCTTGCACAGTCTaGGGCATCGAGGTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGAACTV*GIEVGG
Trigger: ACCTCCAACCTCGATGCCCAAGACTGTGCAAGCTGC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTTCCGCTGGGTCCCGCTaGGGTTCAGGACGTCAACGT +
Preference number: 5 (lower is better)
Translates to: WRGPGYYRPCGSPVAETASAGSR*GSGRQR
Trigger: ACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGGA...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCAGGCCCGTCTCTGAGTaGAACAGGGTTGAGTCCACC +
Preference number: 5 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVRPVSE*NRVEST
Trigger: GGTGGACTCAACCCTGTTCAACTCAGAGACGGGCCT...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCCCTGGAGGAAGCTTCTaGAATCAAAAGTCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVPGGSF*NQKSWQ
Trigger: CTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGG...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGCAGAGCTTAAAACCTaGGGCTCTGGGGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: GSSEALIENTAPSTHSARAELKT*GSGAGS
Trigger: AGAGCCTGCCCCAGAGCCCAAGGTTTTAAGCTCTGC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
ENST00000453963.5
CDS TCA 90 bp CCCAGCCATGCCAGACGGGACCGTCTGGGGCGGTGGCTGCATGACTaGACCCTTGCACAAGTCGATGCTGCTTACAGAAGGAAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: PSHARRDRLGRWLHD*TLAQVDAAYRRKQD
Trigger: ATCCTGCTTCCTTCTGTAAGCAGCATCGACTTGTGCAAGGGTTCAGTCATGCAGCCACCGCCCCAGACGGTCCCGTCTGGCATGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS GCA 90 bp TCTCAACATTCTCATACTGCGAGCCGCTGGCATCCGGCACCCCTGTaGTCGCTGTGTCACCCCACACATCACCAGCAGCCTCATTGCTGG +
Preference number: 5 (lower is better)
Translates to: SQHSHTASRWHPAPL*SLCHPTHHQQPHCW
Trigger: CCAGCAATGAGGCTGCTGGTGATGTGTGGGGTGACACAGCGAGCACAGGGGTGCCGGATGCCAGCGGCTCGCAGTATGAGAATGTTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 90 bp TTCTCGGGTGCTGGATACACAGTATCCAAGGGCGGTGCCCCTGCGTaGGGAAGCATGTGCACAGCTTCCGTGGTGGAGTTAAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: FSGAGYTVSKGGAPA*GSMCTASVVELRGR
Trigger: CCTGCCTCTTAACTCCACCACGGAAGCTGTGCACATGCTTCCGCACGCAGGGGCACCGCCCTTGGATACTGTGTATCCAGCACCCGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 90 bp CCTCTTCTCGGGTGCTGGATACACAGTATCCAAGGGCGGTGCCCCTaGGTGCGGAAGCATGTGCACAGCTTCCGTGGTGGAGTTAAGAGG +
Preference number: 5 (lower is better)
Translates to: PLLGCWIHSIQGRCP*VRKHVHSFRGGVKR
Trigger: CCTCTTAACTCCACCACGGAAGCTGTGCACATGCTTCCGCACGCAGGGGCACCGCCCTTGGATACTGTGTATCCAGCACCCGAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp TGCTATAGCTGGATGACACGCTGTCAGGGTGCACTGTATGCAGTGTaGCATCAGGGGCTCCGGTGTGGCACACAGCACCATGCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: CYSWMTRCQGALYAV*HQGLRCGTQHHAWA
Trigger: TGCCCAGGCATGGTGCTGTGTGCCACACCGGAGCCCCTGATGCCACACTGCATACAGTGCACCCTGACAGCGTGTCATCCAGCTATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp ATGTGCACAGCTTCCGTGGTGGAGTTAAGAGGCAGGGGACAGACCTaGGGTGCACAGAGGGTCTCCATGTTGTCTGGTGGCTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: MCTASVVELRGRGQT*GAQRVSMLSGGCSR
Trigger: CCTGGAGCAGCCACCAGACAACATGGAGACCCTCTGTGCACCCCAGGTCTGTCCCCTGCCTCTTAACTCCACCACGGAAGCTGTGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp CCCGCGTCGACCAGAACCAGACTTGCTGGTGACTGTGCTGAGTTCTaGGCCTGTCCCTGTGCGGGCAGACTTTCTGGATTTGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: PASTRTRLAGDCAEF*ACPCAGRLSGFDSS
Trigger: GGAGCTGTCAAATCCAGAAAGTCTGCCCGCACAGGGACAGGCCCAGAACTCAGCACAGTCACCAGCAAGTCTGGTTCTGGTCGACGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS-3UTR CAA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGCTGCAACGGGCAAGTaGTCGGAGCCACTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: STHSARFKHGEGPDGAEQAATGK*SEPLLH
Trigger: ATGCAGCAGTGGCTCCGACAACTTGCCCGTTGCAGC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CAA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGGAGGAAGGGTCCAAATaGAGGGGCTCACTTGGCAGA +
Preference number: 5 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLEEGSK*RGSLGR
Trigger: TCTGCCAAGTGAGCCCCTCAATTTGGACCCTTCCTC...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAACTTCACCAACCACGTaGGCGCGATCTGCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: LLPSDWATRWAVPSALGTTSPTT*ARSASN
Trigger: ATTTGAGGCAGATCGCGCCAACGTGGTTGGTGAAGT...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGGGGCCAGAAGGACGTaGCCTCCAAAATCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: TGPHGGQSPALWVHKITHGARRT*PPKSGS
Trigger: GCTGCCAGATTTTGGAGGCAACGTCCTTCTGGCCCC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGCAGGTGGCTGAGGTTTaGCACACACATAAAGCGCCG +
Preference number: 5 (lower is better)
Translates to: GSSEALIENTAPSTHSARQVAEV*HTHKAP
Trigger: CGGCGCTTTATGTGTGTGCAAAACCTCAGCCACCTG...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCGACCAGAACCAGACTaGCTGGTGACTGTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVRPEPD*LVTVLS
Trigger: ACTCAGCACAGTCACCAGCAAGTCTGGTTCTGGTCG...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGCGACCAGAACCAGACTaGCTGGTGACTGTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGRPEPD*LVTVLS
Trigger: ACTCAGCACAGTCACCAGCAAGTCTGGTTCTGGTCG...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACGGATCGTACCTCCAGTaGTTGTCACGTTTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADGSYLQ*LSRFSG
Trigger: GCCCGAGAAACGTGACAACAACTGGAGGTACGATCC...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTTATGGGTGTCGTCTTaGGCCAGGGGTCCCGGGAAC +
Preference number: 5 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQLWVSS*ARGPGN
Trigger: GTTCCCGGGACCCCTGGCCAAAGACGACACCCATAA...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCGACTCGACGTCCATGTaGTTGTTCAAGTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVDSTSM*LFKLDK
Trigger: CTTGTCCAACTTGAACAACAACATGGACGTCGAGTC...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATCATCCAAGAGGCCCCTaGAAGCCAGAGTGTCGCCCA +
Preference number: 5 (lower is better)
Translates to: TGPHGGQSPALWVHKITHHPRGP*KPECRP
Trigger: TGGGCGACACTCTGGCTTCAAGGGGCCTCTTGGATG...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCTGTCCGGGTCTCTTaGTTTCGGGAGCGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAPVRVS*FRERVR
Trigger: TCTCACCCGCTCCCGAAACAAAGAGACCCGGACAGG...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGTCCTTCGTTTCTTTCTaGGCTGCCTGTCCGGGTCTC +
Preference number: 5 (lower is better)
Translates to: GSSEALIENTAPSTHSARSFVSF*AACPGL
Trigger: GAGACCCGGACAGGCAGCCAAGAAAGAAACGAAGGA...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS TCA 90 bp CAAGGCCTCCATGCTGTGGACCTCCACCAAGGCCGGCTGTCCTTCTaGAGGCAGATTGGGAATCACTTTGATAAGCTGACCGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: QGLHAVDLHQGRLSF*RQIGNHFDKLTARA
Trigger: GGCCCTGGCGGTCAGCTTATCAAAGTGATTCCCAATCTGCCTTCAGAAGGACAGCCGGCCTTGGTGGAGGTCCACAGCATGGAGGCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
ENST00000472305.1
CDS GCA 90 bp CCTGTCCCCGAAGGCAGAGTGCTCTCTCCTGTATGCGTCATACTCTaGATCACACCAATACCTCCGGTCATAGGTGCGGGGGTCCCTGAC +
Preference number: 5 (lower is better)
Translates to: PVPEGRVLSPVCVIL*ITPIPPVIGAGVPD
Trigger: GTCAGGGACCCCCGCACCTATGACCGGAGGTATTGGTGTGATGCAGAGTATGACGCATACAGGAGAGAGCACTCTGCCTTCGGGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 90 bp GTCGCCAGGAGCCTGAGAAGCACAGAGAAGTCACCTCAGCAGGGCTaGGCTGCACAGCAGCTGTCACTTCAAGTGCAGATACAGACACCG +
Preference number: 5 (lower is better)
Translates to: VARSLRSTEKSPQQG*AAQQLSLQVQIQTP
Trigger: CGGTGTCTGTATCTGCACTTGAAGTGACAGCTGCTGTGCAGCGCAGCCCTGCTGAGGTGACTTCTCTGTGCTTCTCAGGCTCCTGGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467838.2
CDS CCA 90 bp TTCTGCATCTGGGGTTGGCACGAACAAGTTAGAAGGAATTGGGAGTaGCGCGAGTGGAGCGACAAAGTCCGCAGGAGCGAGAGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: FCIWGWHEQVRRNWE*REWSDKVRRSESRL
Trigger: GAGCCGGCTCTCGCTCCTGCGGACTTTGTCGCTCCACTCGCGCCACTCCCAATTCCTTCTAACTTGTTCGTGCCAACCCCAGATGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS-3UTR CAA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTGCATGACTGAACCCTaGCACAAGTCGATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSACMTEP*HKSMLL
Trigger: AAGCAGCATCGACTTGTGCAAGGGTTCAGTCATGCA...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CAA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACAGCCCAGTGGTGTACTTaGGAGCGCCTGTCTACTAAA +
Preference number: 5 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATAQWCT*ERLSTK
Trigger: TTTAGTAGACAGGCGCTCCAAAGTACACCACTGGGC...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CAA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACATCCTCCTCTCCCATTTaGGGAGGATTCTCAAGGTTC +
Preference number: 5 (lower is better)
Translates to: LLPSDWATRWAVPSALGTSSSPI*GGFSRF
Trigger: GAACCTTGAGAATCCTCCCAAAATGGGAGAGGAGGA...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACATGGCTGGGATGGTGGTaGAACCAGCAAATTAGCAGG +
Preference number: 5 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATWLGWW*NQQISR
Trigger: CCTGCTAATTTGCTGGTTCAACCACCATCCCAGCCA...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGATGACTGGCAACACTTaGCTGAGAAGCGAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGMTGNT*LRSEAV
Trigger: GACAGCCTCGCTTCTCAGCAAAGTGTTGCCAGTCAT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGGCTGTCCATCTTACTaGCAAGTAGCAGAGCGTGAC +
Preference number: 5 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGGCPSY*QVAERD
Trigger: GTCACGCTCTGCTACTTGCAAGTAAGATGGACAGCC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGCTTCCGTCCTCTGGATaGCTTCGTTGGTTGCGAACT +
Preference number: 5 (lower is better)
Translates to: GSSEALIENTAPSTHSARLPSSG*LRWLRT
Trigger: AGTTCGCAACCAACGAAGCAATCCAGAGGACGGAAG...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCTTCCGTCCTCTGGATaGCTTCGTTGGTTGCGAACT +
Preference number: 5 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLLPSSG*LRWLRT
Trigger: AGTTCGCAACCAACGAAGCAATCCAGAGGACGGAAG...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCTTCCGTCCTCTGGATaGCTTCGTTGGTTGCGAACT +
Preference number: 5 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADLPSSG*LRWLRT
Trigger: AGTTCGCAACCAACGAAGCAATCCAGAGGACGGAAG...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGCAGCTTGCACAGTCTaGGGCATCGAGGTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: STHSARFKHGEGPDGAEQAACTV*GIEVGG
Trigger: ACCTCCAACCTCGATGCCCAAGACTGTGCAAGCTGC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATCAATCCTCCCTAGCCTaGAGCTCCCGGAGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: YYRPCGSPVAETAPASMNQSSLA*SSRRWR
Trigger: GCGCCACCTCCGGGAGCTCAAGGCTAGGGAGGATTG...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGACTCACAGCTGGGCTaGGAGAGGCCCTGGTTACTA +
Preference number: 5 (lower is better)
Translates to: TGPHGGQSPALWVHKITHDSQLG*ERPWLL
Trigger: TAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTGACTCACAGCTGGGCTaGGAGAGGCCCTGGTTACTA +
Preference number: 5 (lower is better)
Translates to: WRGPGYYRPCGSPVAETADSQLG*ERPWLL
Trigger: TAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTC...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACGCCTGTGGAACATTTaGGAAAACATCCTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: LLPSDWATRWAVPSALGTRLWNI*ENILGG
Trigger: ACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCG...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS GCA 90 bp CACACAGTGAGCAGTGATGTCTGCAAGGCCGGGCTCACAAAGAAATaGCTCAACAAGGAACATACTTGGCCAGGGGTCCCGGGAACGCCC +
Preference number: 5 (lower is better)
Translates to: HTVSSDVCKAGLTKK*LNKEHTWPGVPGTP
Trigger: GGGCGTTCCCGGGACCCCTGGCCAAGTATGTTCCTTGTTGAGGCATTTCTTTGTGAGCCCGGCCTTGCAGACATCACTGCTCACTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472305.1
CDS CCA 90 bp GCTGTAGACATCCTGGTAATAGAGGGAGGCTGCGCCAGGCTCCGGTaGGTACGGCAAAGAGTACTGAGGCTGGTAGGCATCGTACAAAGG +
Preference number: 5 (lower is better)
Translates to: AVDILVIEGGCARLR*VRQRVLRLVGIVQR
Trigger: CCTTTGTACGATGCCTACCAGCCTCAGTACTCTTTGCCGTACCCACCGGAGCCTGGCGCAGCCTCCCTCTATTACCAGGATGTCTACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp CACGTGGGTGCGGCCAAGGACTCCTCTTCTGGCTTCTCTTTCAGCTaGGGATCGAAGAGTCGTAACTGGGAAGCCATCTGCACAAGCTGG +
Preference number: 5 (lower is better)
Translates to: HVGAAKDSSSGFSFS*GSKSRNWEAICTSW
Trigger: CCAGCTTGTGCAGATGGCTTCCCAGTTACGACTCTTCGATCCCCAGCTGAAAGAGAAGCCAGAAGAGGAGTCCTTGGCCGCACCCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS-3UTR CAA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAATCTGGCAGCTCACTTaGCGCCCACAGAGTCGTTGC +
Preference number: 5 (lower is better)
Translates to: APAWRKLLESKVVAVDPRIWQLT*RPQSRC
Trigger: GCAACGACTCTGTGGGCGCAAAGTGAGCTGCCAGAT...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCTCCGAAAACATGGCTTaGGGTAGTTGTGGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGSENMA*GSCGGE
Trigger: TTCTCCCCCACAACTACCCAAAGCCATGTTTTCGGA...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGTCCGAAAACATGGCTTaGGGTAGTTGTGGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGSENMA*GSCGGE
Trigger: TTCTCCCCCACAACTACCCAAAGCCATGTTTTCGGA...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGCGACCAGAACCAGACTaGCTGGTGACTGTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQRPEPD*LVTVLS
Trigger: ACTCAGCACAGTCACCAGCAAGTCTGGTTCTGGTCG...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATTCGTACCTCCAGTTGTaGTCACGTTTCTCGGGCCTG +
Preference number: 5 (lower is better)
Translates to: TGPHGGQSPALWVHKITHSYLQL*SRFSGL
Trigger: CAGGCCCGAGAAACGTGACAACAACTGGAGGTACGA...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGGGATCGTACCTCCAGTaGTTGTCACGTTTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQGSYLQ*LSRFSG
Trigger: GCCCGAGAAACGTGACAACAACTGGAGGTACGATCC...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCACAGGAGAAGTTGGTCTaGATGAAACTTGCTCCATGG +
Preference number: 5 (lower is better)
Translates to: EVPGFTRADRGTERAAPSQEKLV*MKLAPW
Trigger: CCATGGAGCAAGTTTCATCAAGACCAACTTCTCCTG...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCCAGGAGAAGTTGGTCTaGATGAAACTTGCTCCATGG +
Preference number: 5 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAQEKLV*MKLAPW
Trigger: CCATGGAGCAAGTTTCATCAAGACCAACTTCTCCTG...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGCCCCGTCAACAGGCCATTCTTCATaGCAGACTCCAAAGCATCCT +
Preference number: 5 (lower is better)
Translates to: EVPGFTRADRGTERAAPSTGHSS*QTPKHP
Trigger: AGGATGCTTTGGAGTCTGCAATGAAGAATGGCCTGT...TGACGGGGCAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTGTCTGCAGAGGGTCGTaGATTGGGAGGCTGTTAGCA +
Preference number: 5 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAVCRGS*IGRLLA
Trigger: TGCTAACAGCCTCCCAATCAACGACCCTCTGCAGAC...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGTCTGCAGAGGGTCGTaGATTGGGAGGCTGTTAGCA +
Preference number: 5 (lower is better)
Translates to: STHSARFKHGEGPDGAEQVCRGS*IGRLLA
Trigger: TGCTAACAGCCTCCCAATCAACGACCCTCTGCAGAC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCATGTTGTTGTTCAAGTaGGACAAGACCATGGCGAGG +
Preference number: 5 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAMLLFK*DKTMAR
Trigger: CCTCGCCATGGTCTTGTCCAACTTGAACAACAACAT...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTCGACGTCCATGTTGTaGTTCAAGTTGGACAAGACC +
Preference number: 5 (lower is better)
Translates to: TPEQRAEPTGRGPRIHTSSTSML*FKLDKT
Trigger: GGTCTTGTCCAACTTGAACAACAACATGGACGTCGA...GCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGTCGACGTCCATGTTGTaGTTCAAGTTGGACAAGACC +
Preference number: 5 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTSTSML*FKLDKT
Trigger: GGTCTTGTCCAACTTGAACAACAACATGGACGTCGA...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCTGTCCGGGTCTCTTaGTTTCGGGAGCGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEPVRVS*FRERVR
Trigger: TCTCACCCGCTCCCGAAACAAAGAGACCCGGACAGG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATTCCTTCGTTTCTTTCTaGGCTGCCTGTCCGGGTCTC +
Preference number: 5 (lower is better)
Translates to: TGPHGGQSPALWVHKITHSFVSF*AACPGL
Trigger: GAGACCCGGACAGGCAGCCAAGAAAGAAACGAAGGA...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGCAGTCCCCAGCGCTTaGGGTACACAAAATCACCCA +
Preference number: 5 (lower is better)
Translates to: STHSARFKHGEGPDGAEQAVPSA*GTQNHP
Trigger: TGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGGCAGTCCCCAGCGCTTaGGGTACACAAAATCACCCA +
Preference number: 5 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQAVPSA*GTQNHP
Trigger: TGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGC...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGCGCCTGTGGAACATTTaGGAAAACATCCTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGRLWNI*ENILGG
Trigger: ACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCG...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAGCAGAGCTTAAAACCTaGGGCTCTGGGGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: APAWRKLLESKVVAVDPRAELKT*GSGAGS
Trigger: AGAGCCTGCCCCAGAGCCCAAGGTTTTAAGCTCTGC...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
ENST00000453963.5
CDS TCA 90 bp GAGCAGAGGCGGGCCGGTGCTCATTCTTCACTCCTGGATTCTGCCTaGGCTCTGGGCTTGCCCAGTGATTCACAATTCTGGGATTTTGCC +
Preference number: 5 (lower is better)
Translates to: EQRRAGAHSSLLDSA*ALGLPSDSQFWDFA
Trigger: GGCAAAATCCCAGAATTGTGAATCACTGGGCAAGCCCAGAGCTCAGGCAGAATCCAGGAGTGAAGAATGAGCACCGGCCCGCCTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 90 bp TGGATCCGTGACCGGCTGCAACGGGCAAGTTGTCGGAGCCACTGCTaGATTATTATTAGCCCGTCTCCTGTAAGGGCTGCTAGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: WIRDRLQRASCRSHC*IIISPSPVRAASPE
Trigger: TTCTGGGCTAGCAGCCCTTACAGGAGACGGGCTAATAATAATGCAGCAGTGGCTCCGACAACTTGCCCGTTGCAGCCGGTCACGGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS GCA 90 bp ACGTTTCTCGGGCCTGTCCCCGAAGGCAGAGTGCTCTCTCCTGTATaGGTCATACTCTGCATCACACCAATACCTCCGGTCATAGGTGCG +
Preference number: 5 (lower is better)
Translates to: TFLGPVPEGRVLSPV*VILCITPIPPVIGA
Trigger: CGCACCTATGACCGGAGGTATTGGTGTGATGCAGAGTATGACGCATACAGGAGAGAGCACTCTGCCTTCGGGGACAGGCCCGAGAAACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 90 bp CAGGAGCCTGAGAAGCACAGAGAAGTCACCTCAGCAGGGCTGCGCTaGACAGCAGCTGTCACTTCAAGTGCAGATACAGACACCGCTTCT +
Preference number: 5 (lower is better)
Translates to: QEPEKHREVTSAGLR*TAAVTSSADTDTAS
Trigger: AGAAGCGGTGTCTGTATCTGCACTTGAAGTGACAGCTGCTGTGCAGCGCAGCCCTGCTGAGGTGACTTCTCTGTGCTTCTCAGGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467838.2
CDS CCA 90 bp ACTGCCCAGTGGTGTACTTTGGAGCGCCTGTCTACTAAAAGCAAATaGATCCGTGACCGGCTGCAACGGGCAAGTTGTCGGAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: TAQWCTLERLSTKSK*IRDRLQRASCRSHC
Trigger: GCAGTGGCTCCGACAACTTGCCCGTTGCAGCCGGTCACGGATCCATTTGCTTTTAGTAGACAGGCGCTCCAAAGTACACCACTGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CCA 90 bp CTTTCAGGATCAGAGTTATTGGCCAGGTGGCTTCCACTTTGCAAGTaGCTCACCTCGTCTCTTCCGTCACTGGGCAAGGCTGCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: LSGSELLARWLPLCK*LTSSLPSLGKAAGG
Trigger: TCCCCCAGCAGCCTTGCCCAGTGACGGAAGAGACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCTGGCCAATAACTCTGATCCTGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp TGGTTCTTCTGCATCTGGGGTTGGCACGAACAAGTTAGAAGGAATTaGGAGTGGCGCGAGTGGAGCGACAAAGTCCGCAGGAGCGAGAGC +
Preference number: 5 (lower is better)
Translates to: WFFCIWGWHEQVRRN*EWREWSDKVRRSES
Trigger: GCTCTCGCTCCTGCGGACTTTGTCGCTCCACTCGCGCCACTCCCAATTCCTTCTAACTTGTTCGTGCCAACCCCAGATGCAGAAGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS-3UTR CAA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATACTTCACCAACCACGTaGGCGCGATCTGCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: TGPHGGQSPALWVHKITHTSPTT*ARSASN
Trigger: ATTTGAGGCAGATCGCGCCAACGTGGTTGGTGAAGT...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGGAAGCACCAGAACCTaGTGGAAAATTACTTTGGGC +
Preference number: 5 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGGSTRT*WKITLG
Trigger: GCCCAAAGTAATTTTCCACAAGGTTCTGGTGCTTCC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATTGGCTGGGATGGTGGTaGAACCAGCAAATTAGCAGG +
Preference number: 5 (lower is better)
Translates to: TGPHGGQSPALWVHKITHWLGWW*NQQISR
Trigger: CCTGCTAATTTGCTGGTTCAACCACCATCCCAGCCA...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACGCAGACTTTCTGGATTaGACAGCTCCGAAAACATGG +
Preference number: 5 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADADFLD*TAPKTW
Trigger: CCATGTTTTCGGAGCTGTCAAATCCAGAAAGTCTGC...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGCAGGAGAAGTTGGTCTaGATGAAACTTGCTCCATGG +
Preference number: 5 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGQEKLV*MKLAPW
Trigger: CCATGGAGCAAGTTTCATCAAGACCAACTTCTCCTG...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGACAGGCCATTCTTCATaGCAGACTCCAAAGCATCCT +
Preference number: 5 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLTGHSS*QTPKHP
Trigger: AGGATGCTTTGGAGTCTGCAATGAAGAATGGCCTGT...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGCTGTCCATCTTACTaGCAAGTAGCAGAGCGTGAC +
Preference number: 5 (lower is better)
Translates to: STHSARFKHGEGPDGAEQGCPSY*QVAERD
Trigger: GTCACGCTCTGCTACTTGCAAGTAAGATGGACAGCC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACATGTTGTTGTTCAAGTaGGACAAGACCATGGCGAGG +
Preference number: 5 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADMLLFK*DKTMAR
Trigger: CCTCGCCATGGTCTTGTCCAACTTGAACAACAACAT...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGACTCGACGTCCATGTaGTTGTTCAAGTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: GSSEALIENTAPSTHSARDSTSM*LFKLDK
Trigger: CTTGTCCAACTTGAACAACAACATGGACGTCGAGTC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGACTCGACGTCCATGTaGTTGTTCAAGTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGDSTSM*LFKLDK
Trigger: CTTGTCCAACTTGAACAACAACATGGACGTCGAGTC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCGACTCGACGTCCATGTaGTTGTTCAAGTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: KSRGSRPQNSGQSRPEEVDSTSM*LFKLDK
Trigger: CTTGTCCAACTTGAACAACAACATGGACGTCGAGTC...GACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCCATCCAAGAGGCCCCTaGAAGCCAGAGTGTCGCCCA +
Preference number: 5 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVHPRGP*KPECRP
Trigger: TGGGCGACACTCTGGCTTCAAGGGGCCTCTTGGATG...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCGGATTGCTTCGTTGGTaGCGAACTTTAAGAATGGCA +
Preference number: 5 (lower is better)
Translates to: RFKHGEGPDGAEQGLGSAGLLRW*RTLRMA
Trigger: TGCCATTCTTAAAGTTCGCAACCAACGAAGCAATCC...GGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGCAGCTTGCACAGTCTaGGGCATCGAGGTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEAACTV*GIEVGG
Trigger: ACCTCCAACCTCGATGCCCAAGACTGTGCAAGCTGC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGACTCACAGCTGGGCTaGGAGAGGCCCTGGTTACTA +
Preference number: 5 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEDSQLG*ERPWLL
Trigger: TAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGAGTGGGTCATGTGGATaGTACCACGAAAAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGSGSCG*YHEKCS
Trigger: TGAGCACTTTTCGTGGTACAATCCACATGACCCACT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGAGGCCCGTCTCTGAGTaGAACAGGGTTGAGTCCACC +
Preference number: 5 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAERPVSE*NRVEST
Trigger: GGTGGACTCAACCCTGTTCAACTCAGAGACGGGCCT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS TCA 90 bp CGGGCGTGTGTCCGGCTGTCCATCTTACTTGCAAGTAGCAGAGCGTaGCCCCACAGGCCATTCTTCATTGCAGACTCCAAAGCATCCTTC +
Preference number: 5 (lower is better)
Translates to: RACVRLSILLASSRA*PHRPFFIADSKASF
Trigger: GAAGGATGCTTTGGAGTCTGCAATGAAGAATGGCCTGTGGGGTCACGCTCTGCTACTTGCAAGTAAGATGGACAGCCGGACACACGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 90 bp AAGAGATGGGATTCTTCAATCAAGGCCACAAGCGGGAAATCAGTCTaGAGGACCGATGCCAGCAGGCTCACGCACCGAGAACGGCTACTC +
Preference number: 5 (lower is better)
Translates to: KRWDSSIKATSGKSV*RTDASRLTHRERLL
Trigger: GAGTAGCCGTTCTCGGTGCGTGAGCCTGCTGGCATCGGTCCTGCAGACTGATTTCCCGCTTGTGGCCTTGATTGAAGAATCCCATCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290037.10
CDS GCA 90 bp AAATGGATCCGTGACCGGCTGCAACGGGCAAGTTGTCGGAGCCACTaGTGCATTATTATTAGCCCGTCTCCTGTAAGGGCTGCTAGCCCA +
Preference number: 5 (lower is better)
Translates to: KWIRDRLQRASCRSH*CIIISPSPVRAASP
Trigger: TGGGCTAGCAGCCCTTACAGGAGACGGGCTAATAATAATGCAGCAGTGGCTCCGACAACTTGCCCGTTGCAGCCGGTCACGGATCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS GCA 90 bp TCGACGTCCATGTTGTTGTTCAAGTTGGACAAGACCATGGCGAGGTaGGGCCTCCAATCTCCCCATTTCTCGTCTCCACAGCACGTGGAC +
Preference number: 5 (lower is better)
Translates to: STSMLLFKLDKTMAR*GLQSPHFSSPQHVD
Trigger: GTCCACGTGCTGTGGAGACGAGAAATGGGGAGATTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACTTGAACAACAACATGGACGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 90 bp GGGTTGAGGGCTGGGACACGCTGCCACGGTAATTCTGGCTCACAGTaGTCTCGTCTGTTTCACCTCCTACGGGAGAAGAATCGATTTGCT +
Preference number: 5 (lower is better)
Translates to: GLRAGTRCHGNSGSQ*SRLFHLLREKNRFA
Trigger: AGCAAATCGATTCTTCTCCCGTAGGAGGTGAAACAGACGAGACCACTGTGAGCCAGAATTACCGTGGCAGCGTGTCCCAGCCCTCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp AGGTTTGCTTCATTGGGCGACTTCCCAGGAAGCCACACTGTTCTGTaGTCTCGTAACAGAAGCTCCGCAATGTCGGTCCCTACCACGGTC +
Preference number: 5 (lower is better)
Translates to: RFASLGDFPGSHTVL*SRNRSSAMSVPTTV
Trigger: GACCGTGGTAGGGACCGACATTGCGGAGCTTCTGTTACGAGACCACAGAACAGTGTGGCTTCCTGGGAAGTCGCCCAATGAAGCAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
ENST00000472305.1
CDS CCA 90 bp TCCTGGACTCGACGTCCATGTTGTTGTTCAAGTTGGACAAGACCATaGCGAGGTGCGGCCTCCAATCTCCCCATTTCTCGTCTCCACAGC +
Preference number: 5 (lower is better)
Translates to: SWTRRPCCCSSWTRP*RGAASNLPISRLHS
Trigger: GCTGTGGAGACGAGAAATGGGGAGATTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACTTGAACAACAACATGGACGTCGAGTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS-3UTR CAA 90 bp CCATCATGTCAGACAGCCGGCTCTCTGGGGCTCCTTCCCAGTGACTGGGCCACATTGTGGAAAATTACTTaGGGCAACACTGCTAGGCAG +
Preference number: 5 (lower is better)
Translates to: PSCQTAGSLGLLPSDWATLWKIT*GNTARQ
Trigger: CTGCCTAGCAGTGTTGCCCAAAGTAATTTTCCACAA...TGTGGCCCAGTCACTGGGAAGGAGCCCCAGAGAGCCGGCTGTCTGACATGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp CCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTGACTCACAGCTGGGCGATGACTGGAATGGTTaGCCTTATTACCATCAGGCA +
Preference number: 5 (lower is better)
Translates to: PSTLKEARDSLGSDSQLGDDWNG*PYYHQA
Trigger: TGCCTGATGGTAATAAGGCAAACCATTCCAGTCATC...GCCCAGCTGTGAGTCACTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATTCCGAAAACATGGCTTaGGGTAGTTGTGGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: TGPHGGQSPALWVHKITHSENMA*GSCGGE
Trigger: TTCTCCCCCACAACTACCCAAAGCCATGTTTTCGGA...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCATTTTTCAGGAGAAGTaGGTCTTGATGAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVIFQEK*VLMKLA
Trigger: AGCAAGTTTCATCAAGACCAACTTCTCCTGAAAAAT...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCTTCTGAAGGCAGATaGGGAATCACTTTGATAAGC +
Preference number: 5 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGPSEGR*GITLIS
Trigger: GCTTATCAAAGTGATTCCCAATCTGCCTTCAGAAGG...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCTCCGCTGGGTCCCGCTaGGGTTCAGGACGTCAACGT +
Preference number: 5 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPSAGSR*GSGRQR
Trigger: ACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGGA...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTCAATCCTCCCTAGCCTaGAGCTCCCGGAGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAQSSLA*SSRRWR
Trigger: GCGCCACCTCCGGGAGCTCAAGGCTAGGGAGGATTG...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATAGGCCCGTCTCTGAGTaGAACAGGGTTGAGTCCACC +
Preference number: 5 (lower is better)
Translates to: YYRPCGSPVAETAPASMNRPVSE*NRVEST
Trigger: GGTGGACTCAACCCTGTTCAACTCAGAGACGGGCCT...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GCGGGACGGAGATCGCGGAGGTCGGTCGGGTTCTTCGGGGAGAACAGCAGCGTCTCAGTCTCTTTAGACTaGACAAGAATACGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: AGRRSRRSVGFFGENSSVSVSLD*TRIRRV
Trigger: AACTCTTCGTATTCTTGTCAAGTCTAAAGAGACTGA...GACGCTGCTGTTCTCCCCGAAGAACCCGACCGACCTCCGCGATCTCCGTCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAAAACACCAAACAGTTaGTATTCCTCCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: STPEQRAEPTGRGPRIHTKTPNS*YSSSRT
Trigger: GGTTCTGCTGGAGGAATACAAACTGTTTGGTGTTTT...CGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATCCTGGAGGAAGCTTCTaGAATCAAAAGTCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: TGPHGGQSPALWVHKITHPGGSF*NQKSWQ
Trigger: CTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGG...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS CCA 90 bp GGCGGGCCGGTGCTCATTCTTCACTCCTGGATTCTGCCTGAGCTCTaGGCTTGCCCAGTGATTCACAATTCTGGGATTTTGCCTGAATGT +
Preference number: 5 (lower is better)
Translates to: GGPVLILHSWILPEL*ACPVIHNSGILPEC
Trigger: ACATTCAGGCAAAATCCCAGAATTGTGAATCACTGGGCAAGCCCAGAGCTCAGGCAGAATCCAGGAGTGAAGAATGAGCACCGGCCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS-3UTR CAA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACGCGCCCACAGAGTCGTaGCTGGGCTCTCACACTTCA +
Preference number: 5 (lower is better)
Translates to: AVTKASLKNRELMPKEPHAPTES*LGSHTS
Trigger: TGAAGTGTGAGAGCCCAGCAACGACTCTGTGGGCGC...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GGCTCCTCGGAGGCGCTGATTGAGAACACAGCGCCCTCCACTCATTCAGCCAGGGTGAGGATAATAAACTaGCATAACCAGAACTCGCCT +
Preference number: 5 (lower is better)
Translates to: GSSEALIENTAPSTHSARVRIIN*HNQNSP
Trigger: AGGCGAGTTCTGGTTATGCAAGTTTATTATCCTCAC...CCTGGCTGAATGAGTGGAGGGCGCTGTGTTCTCAATCAGCGCCTCCGAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp CAGAACAGCGGGCAGAGCCGACCGGAAGAGGTCCCAGGATTCACACGAGCTGACTGCCTTACGATCCTTTaGACTTTCTGGAACCAAGTT +
Preference number: 5 (lower is better)
Translates to: QNSGQSRPEEVPGFTRADCLTIL*TFWNQV
Trigger: AACTTGGTTCCAGAAAGTCAAAAGGATCGTAAGGCA...GTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGTGCCTTACGATCCTTTaGACTTTCTGGAACCAAGTT +
Preference number: 5 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGCLTIL*TFWNQV
Trigger: AACTTGGTTCCAGAAAGTCAAAAGGATCGTAAGGCA...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTCGCCCCAGGCCCAGATaGTCTGGGATGACTGGCAAC +
Preference number: 5 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFRPRPR*SGMTGN
Trigger: GTTGCCAGTCATCCCAGACAATCTGGGCCTGGGGCG...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TCACCCTCTCTTTGCTCCCAGCACCTTAAAGGAAGCGCGGGACTCACTGGGCAGTCGACGTCCATGTTGTaGTTCAAGTTGGACAAGACC +
Preference number: 5 (lower is better)
Translates to: SPSLCSQHLKGSAGLTGQSTSML*FKLDKT
Trigger: GGTCTTGTCCAACTTGAACAACAACATGGACGTCGA...CTGCCCAGTGAGTCCCGCGCTTCCTTTAAGGTGCTGGGAGCAAAGAGAGGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATTCGACGTCCATGTTGTaGTTCAAGTTGGACAAGACC +
Preference number: 5 (lower is better)
Translates to: TGPHGGQSPALWVHKITHSTSML*FKLDKT
Trigger: GGTCTTGTCCAACTTGAACAACAACATGGACGTCGA...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGGTCTGCCTCAGTCCCAAACAATCGATTaGTTCTTGTCATCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: SNTARAQMVQSRGWGLPQSQTID*FLSSGK
Trigger: TTTGCCAGATGACAAGAACAAATCGATTGTTTGGGA...CTGAGGCAGACCCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAATCCGCTGGGTCCCGCTaGGGTTCAGGACGTCAACGT +
Preference number: 5 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQSAGSR*GSGRQR
Trigger: ACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGGA...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGAAAACACCAAACAGTTaGTATTCCTCCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLKTPNS*YSSSRT
Trigger: GGTTCTGCTGGAGGAATACAAACTGTTTGGTGTTTT...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGGTTGGGAAAACACCAAACAGTTaGTATTCCTCCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: FSQVQTRRGPRWCRAGVGKTPNS*YSSSRT
Trigger: GGTTCTGCTGGAGGAATACAAACTGTTTGGTGTTTT...CCCAACCCCTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS TCA 90 bp TGGAATGTAGTGAGGAAGATATGGCAGAGTCTGAACTTCAGGCTCTaGACTGGGACCGACCTCTGCACTCCTGTTCATCTCAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: WNVVRKIWQSLNFRL*TGTDLCTPVHLRPR
Trigger: CCTGGGCCTGAGATGAACAGGAGTGCAGAGGTCGGTCCCAGTTCAGAGCCTGAAGTTCAGACTCTGCCATATCTTCCTCACTACATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CCA 90 bp AAGACAGGTGGACTGCTTTTGGACGAACTGCCCAGTGGTGTACTTTaGAGCGCCTGTCTACTAAAAGCAAATGGATCCGTGACCGGCTGC +
Preference number: 5 (lower is better)
Translates to: KTGGLLLDELPSGVL*SACLLKANGSVTGC
Trigger: GCAGCCGGTCACGGATCCATTTGCTTTTAGTAGACAGGCGCTCCAAAGTACACCACTGGGCAGTTCGTCCAAAAGCAGTCCACCTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CCA 90 bp GTTCCCATGAGGGTGGCCCCCATGAGACGTTTCAGGATCCACTCCTaGAATGTAGTGAGGAAGATATGGCAGAGTCTGAACTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: VPMRVAPMRRFRIHS*NVVRKIWQSLNFRL
Trigger: GAGCCTGAAGTTCAGACTCTGCCATATCTTCCTCACTACATTCCAGGAGTGGATCCTGAAACGTCTCATGGGGGCCACCCTCATGGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CCA 90 bp TCTGAACAAATTCTAAGTTCTCAACATTCTCATACTGCGAGCCGCTaGCATCCGGCACCCCTGTGCTCGCTGTGTCACCCCACACATCAC +
Preference number: 5 (lower is better)
Translates to: SEQILSSQHSHTASR*HPAPLCSLCHPTHH
Trigger: GTGATGTGTGGGGTGACACAGCGAGCACAGGGGTGCCGGATGCCAGCGGCTCGCAGTATGAGAATGTTGAGAACTTAGAATTTGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS-3UTR CAA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGCTGCAACGGGCAAGTaGTCGGAGCCACTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAAATGK*SEPLLH
Trigger: ATGCAGCAGTGGCTCCGACAACTTGCCCGTTGCAGC...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CAA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTACCGTCATGTGGGTTTaGCCTGCTCAGGGGTCGGTC +
Preference number: 5 (lower is better)
Translates to: QSLSVAKLGAEILSSRAATVMWV*PAQGSV
Trigger: GACCGACCCCTGAGCAGGCAAAACCCACATGACGGT...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGAGGAAGGGTCCAAATaGAGGGGCTCACTTGGCAGA +
Preference number: 5 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWEEGSK*RGSLGR
Trigger: TCTGCCAAGTGAGCCCCTCAATTTGGACCCTTCCTC...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACATCTGGCAGCTCACTTaGCGCCCACAGAGTCGTTGC +
Preference number: 5 (lower is better)
Translates to: AVTKASLKNRELMPKEPHIWQLT*RPQSRC
Trigger: GCAACGACTCTGTGGGCGCAAAGTGAGCTGCCAGAT...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGATGACTGGAATGGTTaGCCTTATTACCATCAGGCA +
Preference number: 5 (lower is better)
Translates to: STHSARFKHGEGPDGAEQDDWNG*PYYHQA
Trigger: TGCCTGATGGTAATAAGGCAAACCATTCCAGTCATC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACAATTTTTCAGGAGAAGTaGGTCTTGATGAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: LLPSDWATRWAVPSALGTIFQEK*VLMKLA
Trigger: AGCAAGTTTCATCAAGACCAACTTCTCCTGAAAAAT...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGCCTTCTGAAGGCAGATaGGGAATCACTTTGATAAGC +
Preference number: 5 (lower is better)
Translates to: STHSARFKHGEGPDGAEQPSEGR*GITLIS
Trigger: GCTTATCAAAGTGATTCCCAATCTGCCTTCAGAAGG...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TGGAGAGGCCCTGGTTACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCTTCTGAAGGCAGATaGGGAATCACTTTGATAAGC +
Preference number: 5 (lower is better)
Translates to: WRGPGYYRPCGSPVAETAPSEGR*GITLIS
Trigger: GCTTATCAAAGTGATTCCCAATCTGCCTTCAGAAGG...AGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTAACCAGGGCCTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTTTATGGGTGTCGTCTTaGGCCAGGGGTCCCGGGAAC +
Preference number: 5 (lower is better)
Translates to: QSLSVAKLGAEILSSRAALWVSS*ARGPGN
Trigger: GTTCCCGGGACCCCTGGCCAAAGACGACACCCATAA...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGGCCATTCTTCATaGCAGACTCCAAAGCATCCT +
Preference number: 5 (lower is better)
Translates to: APAWRKLLESKVVAVDPRTGHSS*QTPKHP
Trigger: AGGATGCTTTGGAGTCTGCAATGAAGAATGGCCTGT...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCCACTCATTCAGCCAGGTTCAAACACGGCGAGGGCCCAGATGGTGCAGAGCAGGGATTGCTTCGTTGGTaGCGAACTTTAAGAATGGCA +
Preference number: 5 (lower is better)
Translates to: STHSARFKHGEGPDGAEQGLLRW*RTLRMA
Trigger: TGCCATTCTTAAAGTTCGCAACCAACGAAGCAATCC...CTGCTCTGCACCATCTGGGCCCTCGCCGTGTTTGAACCTGGCTGAATGAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACACAAAATCACCCATGGATTGCTTCGTTGGTaGCGAACTTTAAGAATGGCA +
Preference number: 5 (lower is better)
Translates to: TGPHGGQSPALWVHKITHGLLRW*RTLRMA
Trigger: TGCCATTCTTAAAGTTCGCAACCAACGAAGCAATCC...ATGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATCTTCCGTCCTCTGGATaGCTTCGTTGGTTGCGAACT +
Preference number: 5 (lower is better)
Translates to: YYRPCGSPVAETAPASMNLPSSG*LRWLRT
Trigger: AGTTCGCAACCAACGAAGCAATCCAGAGGACGGAAG...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GACCGGAAGAGGTCCCAGGATTCACACGAGCTGACCGAGGGACAGAGAGGGCTGTCCCAAACAATCGATTaGTTCTTGTCATCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: DRKRSQDSHELTEGQRGLSQTID*FLSSGK
Trigger: TTTGCCAGATGACAAGAACAAATCGATTGTTTGGGA...CAGCCCTCTCTGTCCCTCGGTCAGCTCGTGTGAATCCTGGGACCTCTTCCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTTCCCAAACAATCGATTaGTTCTTGTCATCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGSQTID*FLSSGK
Trigger: TTTGCCAGATGACAAGAACAAATCGATTGTTTGGGA...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTCCGCTGGGTCCCGCTaGGGTTCAGGACGTCAACGT +
Preference number: 5 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSSAGSR*GSGRQR
Trigger: ACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGGA...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CTCCTTCCCAGTGACTGGGCCACACGGTGGGCAGTCCCCAGCGCTTTGGGTACATCAGTCTCTTTAGACTaGACAAGAATACGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: LLPSDWATRWAVPSALGTSVSLD*TRIRRV
Trigger: AACTCTTCGTATTCTTGTCAAGTCTAAAGAGACTGA...TGTACCCAAAGCGCTGGGGACTGCCCACCGTGTGGCCCAGTCACTGGGAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS TCA 90 bp CTACCACGGTCTTATGGGTGTCGTCTCTGCAGAAAGAACACACAGTaGGCAGTGATGTCTGCAAGGCCGGGCTCACAAAGAAATGCCTCA +
Preference number: 5 (lower is better)
Translates to: LPRSYGCRLCRKNTQ*AVMSARPGSQRNAS
Trigger: TGAGGCATTTCTTTGTGAGCCCGGCCTTGCAGACATCACTGCTCACTGTGTGTTCTTTCTGCAGAGACGACACCCATAAGACCGTGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472305.1
CDS GCA 90 bp CTTTGGAGCGCCTGTCTACTAAAAGCAAATGGATCCGTGACCGGCTaGAACGGGCAAGTTGTCGGAGCCACTGCTGCATTATTATTAGCC +
Preference number: 5 (lower is better)
Translates to: LWSACLLKANGSVTG*NGQVVGATAALLLA
Trigger: GGCTAATAATAATGCAGCAGTGGCTCCGACAACTTGCCCGTTGCAGCCGGTCACGGATCCATTTGCTTTTAGTAGACAGGCGCTCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS GCA 90 bp AATGTACTTTCAGGATCAGAGTTATTGGCCAGGTGGCTTCCACTTTaGAAGTGGCTCACCTCGTCTCTTCCGTCACTGGGCAAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: NVLSGSELLARWLPL*KWLTSSLPSLGKAA
Trigger: AGCAGCCTTGCCCAGTGACGGAAGAGACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCTGGCCAATAACTCTGATCCTGAAAGTACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 90 bp CTCTTCCACCTGCTCCACTGCCTCATTCGTGAAATCAATCAGGTTTaGTTCATTGGGCGACTTCCCAGGAAGCCACACTGTTCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: LFHLLHCLIREINQV*FIGRLPRKPHCSVV
Trigger: GACCACAGAACAGTGTGGCTTCCTGGGAAGTCGCCCAATGAAGCAAACCTGATTGATTTCACGAATGAGGCAGTGGAGCAGGTGGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
ENST00000472305.1
CDS GCA 90 bp GTGAGGAAAGAGAGCTGGGCCTCACCAGACTCCTCCTCTTCCACCTaGTCCACTGCCTCATTCGTGAAATCAATCAGGTTTGCTTCATTG +
Preference number: 5 (lower is better)
Translates to: VRKESWASPDSSSST*STASFVKSIRFASL
Trigger: CAATGAAGCAAACCTGATTGATTTCACGAATGAGGCAGTGGAGCAGGTGGAAGAGGAGGAGTCTGGTGAGGCCCAGCTCTCTTTCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
ENST00000472305.1
CDS GCA 90 bp AGTCACCTCAGCAGGGCTGCGCTGCACAGCAGCTGTCACTTCAAGTaGAGATACAGACACCGCTTCTGGGTGGGATTTACAGTACTTTTA +
Preference number: 5 (lower is better)
Translates to: SHLSRAALHSSCHFK*RYRHRFWVGFTVLL
Trigger: TAAAAGTACTGTAAATCCCACCCAGAAGCGGTGTCTGTATCTGCACTTGAAGTGACAGCTGCTGTGCAGCGCAGCCCTGCTGAGGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467838.2
CDS CCA 90 bp TGGGCCTTGCAAGACAGGTGGACTGCTTTTGGACGAACTGCCCAGTaGTGTACTTTGGAGCGCCTGTCTACTAAAAGCAAATGGATCCGT +
Preference number: 5 (lower is better)
Translates to: WALQDRWTAFGRTAQ*CTLERLSTKSKWIR
Trigger: ACGGATCCATTTGCTTTTAGTAGACAGGCGCTCCAAAGTACACCACTGGGCAGTTCGTCCAAAAGCAGTCCACCTGTCTTGCAAGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CCA 90 bp TTGGGCAACACTGCTAGGCAGAGACAAGCTAAGGACAGAGCTGGTTaGAATCCCAGACAAAGAAGTGTTCTCCCCAGAATCACCACCGAG +
Preference number: 5 (lower is better)
Translates to: LGNTARQRQAKDRAG*NPRQRSVLPRITTE
Trigger: CTCGGTGGTGATTCTGGGGAGAACACTTCTTTGTCTGGGATTCCAACCAGCTCTGTCCTTAGCTTGTCTCTGCCTAGCAGTGTTGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS-3UTR CAA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACACAGGTGGACTGCTTTaGGACGAACTGCCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: AVTKASLKNRELMPKEPHTGGLL*DELPSG
Trigger: ACCACTGGGCAGTTCGTCCAAAAGCAGTCCACCTGT...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CAA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGTGGCTGGGATGGTGGTaGAACCAGCAAATTAGCAGG +
Preference number: 5 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWWLGWW*NQQISR
Trigger: CCTGCTAATTTGCTGGTTCAACCACCATCCCAGCCA...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGATGACTGGCAACACTTaGCTGAGAAGCGAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWMTGNT*LRSEAV
Trigger: GACAGCCTCGCTTCTCAGCAAAGTGTTGCCAGTCAT...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGGGCTGGAGTAATAGCTaGCATAGTAATCGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEGWSNS*HSNRSD
Trigger: GTCAGAGCGATTACTATGCAAGCTATTACTCCAGCC...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCGTCTGCAGAGGGTCGTaGATTGGGAGGCTGTTAGCA +
Preference number: 5 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPVCRGS*IGRLLA
Trigger: TGCTAACAGCCTCCCAATCAACGACCCTCTGCAGAC...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGACTCACAGCTGGGCTaGGAGAGGCCCTGGTTACTA +
Preference number: 5 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQDSQLG*ERPWLL
Trigger: TAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCCGACCGGAAGAGGTTCAGTCTCTTTAGACTaGACAAGAATACGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: QKSWQSTPEQRAEPTGRGSVSLD*TRIRRV
Trigger: AACTCTTCGTATTCTTGTCAAGTCTAAAGAGACTGA...ACCTCTTCCGGTCGGCTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATCCTGGAGGAAGCTTCTaGAATCAAAAGTCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: YYRPCGSPVAETAPASMNPGGSF*NQKSWQ
Trigger: CTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGG...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGCAGAGCTTAAAACCTaGGGCTCTGGGGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQAELKT*GSGAGS
Trigger: AGAGCCTGCCCCAGAGCCCAAGGTTTTAAGCTCTGC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
ENST00000453963.5
CDS TCA 90 bp GGACGGCCTAGCCCAGGGCTGGAGCAGAAATCGTCAAAGTCCGCTTaGCCAGATAAGCCTGCTTTTTCAGATGAGAGATTCTCCTCATTT +
Preference number: 5 (lower is better)
Translates to: GRPSPGLEQKSSKSA*PDKPAFSDERFSSF
Trigger: AAATGAGGAGAATCTCTCATCTGAAAAAGCAGGCTTATCTGGTCAAGCGGACTTTGACGATTTCTGCTCCAGCCCTGGGCTAGGCCGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS TCA 90 bp GGTCTTATGGGTGTCGTCTCTGCAGAAAGAACACACAGTGAGCAGTaGTGTCTGCAAGGCCGGGCTCACAAAGAAATGCCTCAACAAGGA +
Preference number: 5 (lower is better)
Translates to: GLMGVVSAERTHSEQ*CLQGRAHKEMPQQG
Trigger: TCCTTGTTGAGGCATTTCTTTGTGAGCCCGGCCTTGCAGACATCACTGCTCACTGTGTGTTCTTTCTGCAGAGACGACACCCATAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472305.1
CDS CCA 90 bp ACTGCTTCTGGCGGACACAGGTCTCCCTTACTTCACCAACCACGTTaGCGCGATCTGCCTCAAATGGTTTTACCCCAACTAAGTGAGATT +
Preference number: 5 (lower is better)
Translates to: TASGGHRSPLLHQPR*RDLPQMVLPQLSEI
Trigger: AATCTCACTTAGTTGGGGTAAAACCATTTGAGGCAGATCGCGCCAACGTGGTTGGTGAAGTAAGGGAGACCTGTGTCCGCCAGAAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp GATCAGGCTGAGCAATCAAGACTGGAGGATTCTGCAGAGACTCAGTaGGCGGTGAGGATAATAAACTTGCATAACCAGAACTCGCCTGGG +
Preference number: 5 (lower is better)
Translates to: DQAEQSRLEDSAETQ*AVRIINLHNQNSPG
Trigger: CCCAGGCGAGTTCTGGTTATGCAAGTTTATTATCCTCACCGCCCACTGAGTCTCTGCAGAATCCTCCAGTCTTGATTGCTCAGCCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS-3UTR CAA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTACAGGTGGACTGCTTTaGGACGAACTGCCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFTGGLL*DELPSG
Trigger: ACCACTGGGCAGTTCGTCCAAAAGCAGTCCACCTGT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CAA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGTCAGGATCAGAGTTATaGGCCAGGTGGCTTCCACTT +
Preference number: 5 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWSGSEL*ARWLPL
Trigger: AAGTGGAAGCCACCTGGCCAATAACTCTGATCCTGA...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTATCTGGCAGCTCACTTaGCGCCCACAGAGTCGTTGC +
Preference number: 5 (lower is better)
Translates to: AGSVFATGKKFTAVTKASIWQLT*RPQSRC
Trigger: GCAACGACTCTGTGGGCGCAAAGTGAGCTGCCAGAT...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGTTGTGGAAAATTACTTaGGGCAACACTGCTAGGCAG +
Preference number: 5 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAELWKIT*GNTARQ
Trigger: CTGCCTAGCAGTGTTGCCCAAAGTAATTTTCCACAA...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGGAAGCACCAGAACCTaGTGGAAAATTACTTTGGGC +
Preference number: 5 (lower is better)
Translates to: YYRPCGSPVAETAPASMNGSTRT*WKITLG
Trigger: GCCCAAAGTAATTTTCCACAAGGTTCTGGTGCTTCC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GCAGTAACTAAGGCCTCTCTCAAAAACCGTGAACTAATGCCGAAGGAACCCCACATGACTGGCAACACTTaGCTGAGAAGCGAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: AVTKASLKNRELMPKEPHMTGNT*LRSEAV
Trigger: GACAGCCTCGCTTCTCAGCAAAGTGTTGCCAGTCAT...GTGGGGTTCCTTCGGCATTAGTTCACGGTTTTTGAGAGAGGCCTTAGTTACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTCCTTCAGGATATCCTaGCCTGGGAGGTGGCCGTTC +
Preference number: 5 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSSFRIS*PGRWPF
Trigger: GAACGGCCACCTCCCAGGCAAGGATATCCTGAAGGA...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCTCGTACCTCCAGTTGTaGTCACGTTTCTCGGGCCTG +
Preference number: 5 (lower is better)
Translates to: ELLSRNCVKILSPSATNLSYLQL*SRFSGL
Trigger: CAGGCCCGAGAAACGTGACAACAACTGGAGGTACGA...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGGATCGTACCTCCAGTaGTTGTCACGTTTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQGSYLQ*LSRFSG
Trigger: GCCCGAGAAACGTGACAACAACTGGAGGTACGATCC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATATGTTGTTGTTCAAGTaGGACAAGACCATGGCGAGG +
Preference number: 5 (lower is better)
Translates to: YYRPCGSPVAETAPASMNMLLFK*DKTMAR
Trigger: CCTCGCCATGGTCTTGTCCAACTTGAACAACAACAT...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCTCGACGTCCATGTTGTaGTTCAAGTTGGACAAGACC +
Preference number: 5 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVSTSML*FKLDKT
Trigger: GGTCTTGTCCAACTTGAACAACAACATGGACGTCGA...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GCTCCCGCCTGGAGGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGACTCTGGATTGCTTCGTaGGTTGCGAACTTTAAGAAT +
Preference number: 5 (lower is better)
Translates to: APAWRKLLESKVVAVDPRLWIAS*VANFKN
Trigger: ATTCTTAAAGTTCGCAACCAACGAAGCAATCCAGAG...TCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGGCGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGCAGTCCCCAGCGCTTaGGGTACACAAAATCACCCA +
Preference number: 5 (lower is better)
Translates to: ELLSRNCVKILSPSATNLAVPSA*GTQNHP
Trigger: TGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGCAGTCCCCAGCGCTTaGGGTACACAAAATCACCCA +
Preference number: 5 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQAVPSA*GTQNHP
Trigger: TGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCAGTGGGTCATGTGGATaGTACCACGAAAAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVSGSCG*YHEKCS
Trigger: TGAGCACTTTTCGTGGTACAATCCACATGACCCACT...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS GCA 90 bp CCGGTGCTCATTCTTCACTCCTGGATTCTGCCTGAGCTCTGGGCTTaGCCAGTGATTCACAATTCTGGGATTTTGCCTGAATGTACTTTC +
Preference number: 5 (lower is better)
Translates to: PVLILHSWILPELWA*PVIHNSGILPECTF
Trigger: GAAAGTACATTCAGGCAAAATCCCAGAATTGTGAATCACTGGGCAAGCCCAGAGCTCAGGCAGAATCCAGGAGTGAAGAATGAGCACCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp GGATTTTGCCTGAATGTACTTTCAGGATCAGAGTTATTGGCCAGGTaGCTTCCACTTTGCAAGTGGCTCACCTCGTCTCTTCCGTCACTG +
Preference number: 5 (lower is better)
Translates to: GFCLNVLSGSELLAR*LPLCKWLTSSLPSL
Trigger: CAGTGACGGAAGAGACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCTGGCCAATAACTCTGATCCTGAAAGTACATTCAGGCAAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp AAATCCGGGAAGAGCACTTCCTGCCTTACGATCCTTTTGACTTTCTaGAACCAAGTTCTCTGGAACTGGCTGGGATGGTGGTTGAACCAG +
Preference number: 5 (lower is better)
Translates to: KSGKSTSCLTILLTF*NQVLWNWLGWWLNQ
Trigger: CTGGTTCAACCACCATCCCAGCCAGTTCCAGAGAACTTGGTTCCAGAAAGTCAAAAGGATCGTAAGGCAGGAAGTGCTCTTCCCGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS-3UTR CAA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGCCCAGTGGTGTACTTaGGAGCGCCTGTCTACTAAA +
Preference number: 5 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQAQWCT*ERLSTK
Trigger: TTTAGTAGACAGGCGCTCCAAAGTACACCACTGGGC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS-3UTR CAA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCCAGGTGGCTTCCACTTaGCAAGTGGCTCACCTCGTC +
Preference number: 5 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAQVAST*QVAHLV
Trigger: GACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCTG...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCTCAGGATCAGAGTTATaGGCCAGGTGGCTTCCACTT +
Preference number: 5 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPSGSEL*ARWLPL
Trigger: AAGTGGAAGCCACCTGGCCAATAACTCTGATCCTGA...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTGAGGAAGGGTCCAAATaGAGGGGCTCACTTGGCAGA +
Preference number: 5 (lower is better)
Translates to: AGSVFATGKKFTAVTKASEEGSK*RGSLGR
Trigger: TCTGCCAAGTGAGCCCCTCAATTTGGACCCTTCCTC...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCATCAGGTTTGCTTCATaGGGCGACTTCCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: ELLSRNCVKILSPSATNLIRFAS*GDFPGS
Trigger: GCTTCCTGGGAAGTCGCCCAATGAAGCAAACCTGAT...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTATCAGGTTTGCTTCATaGGGCGACTTCCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFIRFAS*GDFPGS
Trigger: GCTTCCTGGGAAGTCGCCCAATGAAGCAAACCTGAT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGGCTGTCCATCTTACTaGCAAGTAGCAGAGCGTGAC +
Preference number: 5 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQGCPSY*QVAERD
Trigger: GTCACGCTCTGCTACTTGCAAGTAAGATGGACAGCC...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCGGATTGCTTCGTTGGTaGCGAACTTTAAGAATGGCA +
Preference number: 5 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVGLLRW*RTLRMA
Trigger: TGCCATTCTTAAAGTTCGCAACCAACGAAGCAATCC...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGCTCTGGATTGCTTCGTaGGTTGCGAACTTTAAGAAT +
Preference number: 5 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAELWIAS*VANFKN
Trigger: ATTCTTAAAGTTCGCAACCAACGAAGCAATCCAGAG...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTCTTCCGTCCTCTGGATaGCTTCGTTGGTTGCGAACT +
Preference number: 5 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFLPSSG*LRWLRT
Trigger: AGTTCGCAACCAACGAAGCAATCCAGAGGACGGAAG...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTCCTTCGTTTCTTTCTaGGCTGCCTGTCCGGGTCTC +
Preference number: 5 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSSFVSF*AACPGL
Trigger: GAGACCCGGACAGGCAGCCAAGAAAGAAACGAAGGA...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGACTCACAGCTGGGCTaGGAGAGGCCCTGGTTACTA +
Preference number: 5 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKADSQLG*ERPWLL
Trigger: TAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGACAAATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGAGTGGGTCATGTGGATaGTACCACGAAAAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: GQMDPAGHACGTFWKTSWSGSCG*YHEKCS
Trigger: TGAGCACTTTTCGTGGTACAATCCACATGACCCACT...CCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCATTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGAAAACACCAAACAGTTaGTATTCCTCCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAEKTPNS*YSSSRT
Trigger: GGTTCTGCTGGAGGAATACAAACTGTTTGGTGTTTT...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCCCTGGAGGAAGCTTCTaGAATCAAAAGTCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPPGGSF*NQKSWQ
Trigger: CTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGG...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGCAGAGCTTAAAACCTaGGGCTCTGGGGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAAELKT*GSGAGS
Trigger: AGAGCCTGCCCCAGAGCCCAAGGTTTTAAGCTCTGC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
ENST00000453963.5
CDS CCA 90 bp ACTTCCTGCCTTACGATCCTTTTGACTTTCTGGAACCAAGTTCTCTaGAACTGGCTGGGATGGTGGTTGAACCAGCAAATTAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TSCLTILLTFWNQVL*NWLGWWLNQQISRL
Trigger: CAGCCTGCTAATTTGCTGGTTCAACCACCATCCCAGCCAGTTCCAGAGAACTTGGTTCCAGAAAGTCAAAAGGATCGTAAGGCAGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS-3UTR CAA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAATCCTCCTCTCCCATTTaGGGAGGATTCTCAAGGTTC +
Preference number: 5 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQSSSPI*GGFSRF
Trigger: GAACCTTGAGAATCCTCCCAAAATGGGAGAGGAGGA...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCTCGTACCTCCAGTTGTaGTCACGTTTCTCGGGCCTG +
Preference number: 5 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKASYLQL*SRFSGL
Trigger: CAGGCCCGAGAAACGTGACAACAACTGGAGGTACGA...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCATCAGGTTTGCTTCATaGGGCGACTTCCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSIRFAS*GDFPGS
Trigger: GCTTCCTGGGAAGTCGCCCAATGAAGCAAACCTGAT...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTGGCTGTCCATCTTACTaGCAAGTAGCAGAGCGTGAC +
Preference number: 5 (lower is better)
Translates to: AGSVFATGKKFTAVTKASGCPSY*QVAERD
Trigger: GTCACGCTCTGCTACTTGCAAGTAAGATGGACAGCC...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp ATGGATCCAGCGGGACACGCCTGTGGAACATTTTGGAAAACATCCTGGGTGGTCCTCTGGATTGCTTCGTaGGTTGCGAACTTTAAGAAT +
Preference number: 5 (lower is better)
Translates to: MDPAGHACGTFWKTSWVVLWIAS*VANFKN
Trigger: ATTCTTAAAGTTCGCAACCAACGAAGCAATCCAGAG...GACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCGTGTCCCGCTGGATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGAAGCTTCTTGAATCAAAAGTCGTGGCAGTCGACCCCAGAACAGCGGGCAGAGTCCCAAACAATCGATTaGTTCTTGTCATCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: GSFLNQKSWQSTPEQRAESQTID*FLSSGK
Trigger: TTTGCCAGATGACAAGAACAAATCGATTGTTTGGGA...CTCTGCCCGCTGTTCTGGGGTCGACTGCCACGACTTTTGATTCAAGAAGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGCAGTCCCCAGCGCTTaGGGTACACAAAATCACCCA +
Preference number: 5 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAAVPSA*GTQNHP
Trigger: TGGGTGATTTTGTGTACCCAAAGCGCTGGGGACTGC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTCGCCTGTGGAACATTTaGGAAAACATCCTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: QSLSVAKLGAEILSSRAARLWNI*ENILGG
Trigger: ACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCG...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp CAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTCCTGGAGGAAGCTTCTaGAATCAAAAGTCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: QSLSVAKLGAEILSSRAAPGGSF*NQKSWQ
Trigger: CTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGG...AGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATGTGATAATGAACTCATaGAACTACAGCGCGAAAGCT +
Preference number: 5 (lower is better)
Translates to: YYRPCGSPVAETAPASMNVIMNS*NYSAKA
Trigger: AGCTTTCGCGCTGTAGTTCAATGAGTTCATTATCAC...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
CDS-3UTR CAA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGGAAGCACCAGAACCTaGTGGAAAATTACTTTGGGC +
Preference number: 5 (lower is better)
Translates to: RSASSFLNSESNRAPTHEGSTRT*WKITLG
Trigger: GCCCAAAGTAATTTTCCACAAGGTTCTGGTGCTTCC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTGCAGACTTTCTGGATTaGACAGCTCCGAAAACATGG +
Preference number: 5 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFADFLD*TAPKTW
Trigger: CCATGTTTTCGGAGCTGTCAAATCCAGAAAGTCTGC...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCTCCTTCAGGATATCCTaGCCTGGGAGGTGGCCGTTC +
Preference number: 5 (lower is better)
Translates to: DKNTKSFRTVREALKLCISFRIS*PGRWPF
Trigger: GAACGGCCACCTCCCAGGCAAGGATATCCTGAAGGA...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTCAGGAGAAGTTGGTCTaGATGAAACTTGCTCCATGG +
Preference number: 5 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFQEKLV*MKLAPW
Trigger: CCATGGAGCAAGTTTCATCAAGACCAACTTCTCCTG...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTACAGGCCATTCTTCATaGCAGACTCCAAAGCATCCT +
Preference number: 5 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFTGHSS*QTPKHP
Trigger: AGGATGCTTTGGAGTCTGCAATGAAGAATGGCCTGT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAACAGGCCATTCTTCATaGCAGACTCCAAAGCATCCT +
Preference number: 5 (lower is better)
Translates to: RSASSFLNSESNRAPTHETGHSS*QTPKHP
Trigger: AGGATGCTTTGGAGTCTGCAATGAAGAATGGCCTGT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AAGTGGGTCATGTGGATTGTACCACGAAAAGTGCTCACGGAAAGTGCAGCCTTTATGTTGTTGTTCAAGTaGGACAAGACCATGGCGAGG +
Preference number: 5 (lower is better)
Translates to: KWVMWIVPRKVLTESAAFMLLFK*DKTMAR
Trigger: CCTCGCCATGGTCTTGTCCAACTTGAACAACAACAT...AAAGGCTGCACTTTCCGTGAGCACTTTTCGTGGTACAATCCACATGACCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAATGTTGTTGTTCAAGTaGGACAAGACCATGGCGAGG +
Preference number: 5 (lower is better)
Translates to: SQCGKTRGRNTKFQSCCQMLLFK*DKTMAR
Trigger: CCTCGCCATGGTCTTGTCCAACTTGAACAACAACAT...TTGACAGCAGCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCGACTCGACGTCCATGTaGTTGTTCAAGTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: ELLSRNCVKILSPSATNLDSTSM*LFKLDK
Trigger: CTTGTCCAACTTGAACAACAACATGGACGTCGAGTC...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTGACTCACAGCTGGGCTaGGAGAGGCCCTGGTTACTA +
Preference number: 5 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSDSQLG*ERPWLL
Trigger: TAGTAACCAGGGCCTCTCCAAGCCCAGCTGTGAGTC...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAAGTGGGTCATGTGGATaGTACCACGAAAAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: RSASSFLNSESNRAPTHESGSCG*YHEKCS
Trigger: TGAGCACTTTTCGTGGTACAATCCACATGACCCACT...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCCGCCTGTGGAACATTTaGGAAAACATCCTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSRLWNI*ENILGG
Trigger: ACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCG...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS CCA 90 bp CTGCACAGCAGCTGTCACTTCAAGTGCAGATACAGACACCGCTTCTaGGTGGGATTTACAGTACTTTTACATAAGCTACAGAAGCAGATC +
Preference number: 5 (lower is better)
Translates to: LHSSCHFKCRYRHRF*VGFTVLLHKLQKQI
Trigger: GATCTGCTTCTGTAGCTTATGTAAAAGTACTGTAAATCCCACCCAGAAGCGGTGTCTGTATCTGCACTTGAAGTGACAGCTGCTGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467838.2
CDS-3UTR CAA 90 bp GAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCCCCAAGTGCTACCAACCTCTTGTGGAAAATTACTTaGGGCAACACTGCTAGGCAG +
Preference number: 5 (lower is better)
Translates to: ELLSRNCVKILSPSATNLLWKIT*GNTARQ
Trigger: CTGCCTAGCAGTGTTGCCCAAAGTAATTTTCCACAA...GAGGTTGGTAGCACTTGGGGAGAGTATCTTAACACAGTTTCTTGACAGCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCTGCCTTACGATCCTTTaGACTTTCTGGAACCAAGTT +
Preference number: 5 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPCLTIL*TFWNQV
Trigger: AACTTGGTTCCAGAAAGTCAAAAGGATCGTAAGGCA...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTGGCTGGAGTAATAGCTaGCATAGTAATCGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: AGSVFATGKKFTAVTKASGWSNS*HSNRSD
Trigger: GTCAGAGCGATTACTATGCAAGCTATTACTCCAGCC...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCTCGTACCTCCAGTTGTaGTCACGTTTCTCGGGCCTG +
Preference number: 5 (lower is better)
Translates to: DKNTKSFRTVREALKLCISYLQL*SRFSGL
Trigger: CAGGCCCGAGAAACGTGACAACAACTGGAGGTACGA...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATATTTTTCAGGAGAAGTaGGTCTTGATGAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: YYRPCGSPVAETAPASMNIFQEK*VLMKLA
Trigger: AGCAAGTTTCATCAAGACCAACTTCTCCTGAAAAAT...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTTCCTTCGTTTCTTTCTaGGCTGCCTGTCCGGGTCTC +
Preference number: 5 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSSFVSF*AACPGL
Trigger: GAGACCCGGACAGGCAGCCAAGAAAGAAACGAAGGA...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TACTACCGACCATGTGGCTCTCCTGTGGCAGAGACAGCTCCGGCTTCAATGAATTCAGTCTCTTTAGACTaGACAAGAATACGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: YYRPCGSPVAETAPASMNSVSLD*TRIRRV
Trigger: AACTCTTCGTATTCTTGTCAAGTCTAAAGAGACTGA...ATTCATTGAAGCCGGAGCTGTCTCTGCCACAGGAGAGCCACATGGTCGGTAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCCCTGGAGGAAGCTTCTaGAATCAAAAGTCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAPGGSF*NQKSWQ
Trigger: CTGCCACGACTTTTGATTCAAGAAGCTTCCTCCAGG...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS GCA 90 bp CCAGTGACCTGGATCTCCATAATCGTACTGGCTGGAGTAATAGCTTaGATAGTAATCGCTCTGACTGCTCCATCCACTTTTGGAACTATA +
Preference number: 5 (lower is better)
Translates to: PVTWISIIVLAGVIA*IVIALTAPSTFGTI
Trigger: TATAGTTCCAAAAGTGGATGGAGCAGTCAGAGCGATTACTATGCAAGCTATTACTCCAGCCAGTACGATTATGGAGATCCAGGTCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp TTAGAAACCATTTCGGAAGCACCAGAACCTTGTGGAAAATTACTTTaGGCAACACTGCTAGGCAGAGACAAGCTAAGGACAGAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: LETISEAPEPCGKLL*ATLLGRDKLRTELV
Trigger: AACCAGCTCTGTCCTTAGCTTGTCTCTGCCTAGCAGTGTTGCCCAAAGTAATTTTCCACAAGGTTCTGGTGCTTCCGAAATGGTTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 90 bp ACAGCAGCTGTCACTTCAAGTGCAGATACAGACACCGCTTCTGGGTaGGATTTACAGTACTTTTACATAAGCTACAGAAGCAGATCCAAG +
Preference number: 5 (lower is better)
Translates to: TAAVTSSADTDTASG*DLQYFYISYRSRSK
Trigger: CTTGGATCTGCTTCTGTAGCTTATGTAAAAGTACTGTAAATCCCACCCAGAAGCGGTGTCTGTATCTGCACTTGAAGTGACAGCTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467838.2
CDS-3UTR CAA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTACTTCACCAACCACGTaGGCGCGATCTGCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSTSPTT*ARSASN
Trigger: ATTTGAGGCAGATCGCGCCAACGTGGTTGGTGAAGT...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp AGAAGTGCATCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAGTGAGGATAATAAACTaGCATAACCAGAACTCGCCT +
Preference number: 5 (lower is better)
Translates to: RSASSFLNSESNRAPTHEVRIIN*HNQNSP
Trigger: AGGCGAGTTCTGGTTATGCAAGTTTATTATCCTCAC...TTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGATGCACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTGATGACTGGAATGGTTaGCCTTATTACCATCAGGCA +
Preference number: 5 (lower is better)
Translates to: AGSVFATGKKFTAVTKASDDWNG*PYYHQA
Trigger: TGCCTGATGGTAATAAGGCAAACCATTCCAGTCATC...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TCCAGCTTCCTTAACAGTGAGTCTAACCGTGCTCCTACACACGAAATGAAGCCCTCCCAAACAATCGATTaGTTCTTGTCATCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: SSFLNSESNRAPTHEMKPSQTID*FLSSGK
Trigger: TTTGCCAGATGACAAGAACAAATCGATTGTTTGGGA...GGGCTTCATTTCGTGTGTAGGAGCACGGTTAGACTCACTGTTAAGGAAGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCAGTGGGTCATGTGGATaGTACCACGAAAAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKASGSCG*YHEKCS
Trigger: TGAGCACTTTTCGTGGTACAATCCACATGACCCACT...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS CCA 90 bp ATTAGCAGGCTGATTAGAAACCATTTCGGAAGCACCAGAACCTTGTaGAAAATTACTTTGGGCAACACTGCTAGGCAGAGACAAGCTAAG +
Preference number: 5 (lower is better)
Translates to: ISRLIRNHFGSTRTL*KITLGNTARQRQAK
Trigger: CTTAGCTTGTCTCTGCCTAGCAGTGTTGCCCAAAGTAATTTTCCACAAGGTTCTGGTGCTTCCGAAATGGTTTCTAATCAGCCTGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS-3UTR CAA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCTCCTCCTCTCCCATTTaGGGAGGATTCTCAAGGTTC +
Preference number: 5 (lower is better)
Translates to: DKNTKSFRTVREALKLCISSSPI*GGFSRF
Trigger: GAACCTTGAGAATCCTCCCAAAATGGGAGAGGAGGA...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCCCTTCTGAAGGCAGATaGGGAATCACTTTGATAAGC +
Preference number: 5 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAPSEGR*GITLIS
Trigger: GCTTATCAAAGTGATTCCCAATCTGCCTTCAGAAGG...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GCTGGAAGCGTCTTTGCAACAGGAAAGAAATTCACTGCAGTAACTAAGGCCTCTAAAACACCAAACAGTTaGTATTCCTCCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: AGSVFATGKKFTAVTKASKTPNS*YSSSRT
Trigger: GGTTCTGCTGGAGGAATACAAACTGTTTGGTGTTTT...AGAGGCCTTAGTTACTGCAGTGAATTTCTTTCCTGTTGCAAAGACGCTTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCGCCTGTGGAACATTTaGGAAAACATCCTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSRLWNI*ENILGG
Trigger: ACCACCCAGGATGTTTTCCAAAATGTTCCACAGGCG...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCGTGATAATGAACTCATaGAACTACAGCGCGAAAGCT +
Preference number: 5 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSVIMNS*NYSAKA
Trigger: AGCTTTCGCGCTGTAGTTCAATGAGTTCATTATCAC...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
CDS-3UTR CAA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCGCAGACTTTCTGGATTaGACAGCTCCGAAAACATGG +
Preference number: 5 (lower is better)
Translates to: DKNTKSFRTVREALKLCIADFLD*TAPKTW
Trigger: CCATGTTTTCGGAGCTGTCAAATCCAGAAAGTCTGC...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCGGCTGGAGTAATAGCTaGCATAGTAATCGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: DKNTKSFRTVREALKLCIGWSNS*HSNRSD
Trigger: GTCAGAGCGATTACTATGCAAGCTATTACTCCAGCC...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS-3UTR CAA 90 bp TTTGGAAAACATCCTGGGTGGTCTGGGCTAAATGATCAAGTGAAACAGAAAGCCGTGATAATGAACTCATaGAACTACAGCGCGAAAGCT +
Preference number: 5 (lower is better)
Translates to: FGKHPGWSGLNDQVKQKAVIMNS*NYSAKA
Trigger: AGCTTTCGCGCTGTAGTTCAATGAGTTCATTATCAC...GGCTTTCTGTTTCACTTGATCATTTAGCCCAGACCACCCAGGATGTTTTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000313084.9
CDS GCA 90 bp AATCGTACTGGCTGGAGTAATAGCTTGCATAGTAATCGCTCTGACTaGTCCATCCACTTTTGGAACTATAGTATCCTTCAGGATATCCTT +
Preference number: 5 (lower is better)
Translates to: NRTGWSNSLHSNRSD*SIHFWNYSILQDIL
Trigger: AAGGATATCCTGAAGGATACTATAGTTCCAAAAGTGGATGGAGCAGTCAGAGCGATTACTATGCAAGCTATTACTCCAGCCAGTACGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS-3UTR CAA 90 bp TACTCAAAGTCTCAGTGTGGCAAAACTCGGGGCAGAAATACTAAGTTCCAGAGCTCAGTCTCTTTAGACTaGACAAGAATACGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: YSKSQCGKTRGRNTKFQSSVSLD*TRIRRV
Trigger: AACTCTTCGTATTCTTGTCAAGTCTAAAGAGACTGA...GCTCTGGAACTTAGTATTTCTGCCCCGAGTTTTGCCACACTGAGACTTTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTCTCTGGATTGCTTCGTaGGTTGCGAACTTTAAGAAT +
Preference number: 5 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSLWIAS*VANFKN
Trigger: ATTCTTAAAGTTCGCAACCAACGAAGCAATCCAGAG...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCCTCTGGATTGCTTCGTaGGTTGCGAACTTTAAGAAT +
Preference number: 5 (lower is better)
Translates to: DKNTKSFRTVREALKLCILWIAS*VANFKN
Trigger: ATTCTTAAAGTTCGCAACCAACGAAGCAATCCAGAG...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTAAAACACCAAACAGTTaGTATTCCTCCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSKTPNS*YSSSRT
Trigger: GGTTCTGCTGGAGGAATACAAACTGTTTGGTGTTTT...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GACAAGAATACGAAGAGTTTCAGAACAGTCAGAGAAGCCTTAAAGCTTTGCATCTCCCAAACAATCGATTaGTTCTTGTCATCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: DKNTKSFRTVREALKLCISQTID*FLSSGK
Trigger: TTTGCCAGATGACAAGAACAAATCGATTGTTTGGGA...GATGCAAAGCTTTAAGGCTTCTCTGACTGTTCTGAAACTCTTCGTATTCTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
CDS-3UTR CAA 90 bp GGCAGAAATACTAAGTTCCAGAGCTGCTGTCAAGAAACTGTGTTAAGATACTCTATTTTTCAGGAGAAGTaGGTCTTGATGAAACTTGCT +
Preference number: 5 (lower is better)
Translates to: GRNTKFQSCCQETVLRYSIFQEK*VLMKLA
Trigger: AGCAAGTTTCATCAAGACCAACTTCTCCTGAAAAAT...AGAGTATCTTAACACAGTTTCTTGACAGCAGCTCTGGAACTTAGTATTTCTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000453963.5
CDS TCA 72 bp CAGGCTCACGCACCGAGAACGGCTACTCCGCCCAGCTaGGAAGCGCGGGGCCCTGACGCGGGCGCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: QAHAPRTATPPS*EARGPDAGALL
Trigger: GAGGAGCGCGCCCGCGTCAGGGCCCCGCGCTTCTCAGCTGGGCGGAGTAGCCGTTCTCGGTGCGTGAGCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290037.10
CDS GCA 72 bp GGAGCTGAGGGCAGCAGCCGCACGCTCGGGCTCGAGTaGTCAGGGCTCGGTGCAGGCACCGCCAGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: GAEGSSRTLGLE*SGLGAGTASRG
Trigger: CCCTCTGCTGGCGGTGCCTGCACCGAGCCCTGAGCACTCGAGCCCGAGCGTGCGGCTGCTGCCCTCAGCTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 72 bp AGGCTGCTGCGGCGGCTGGCCAGGCTGTGTGCGCTGTaGAGGCTCCGTGCCGAGTGCTCGCTGTGGACGCTG +
Preference number: 6 (lower is better)
Translates to: RLLRRLARLCAL*RLRAECSLWTL
Trigger: CAGCGTCCACAGCGAGCACTCGGCACGGAGCCTGCACAGCGCACACAGCCTGGCCAGCCGCCGCAGCAGCCT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 72 bp CAGCCGCACGCTCGGGCTCGAGTGCTCAGGGCTCGGTaGAGGCACCGCCAGCAGAGGGTTGGCGATCCCCAG +
Preference number: 6 (lower is better)
Translates to: QPHARARVLRAR*RHRQQRVGDPQ
Trigger: CTGGGGATCGCCAACCCTCTGCTGGCGGTGCCTGCACCGAGCCCTGAGCACTCGAGCCCGAGCGTGCGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 72 bp GTTGTAGAAGGGCATGGCCCCGCTGGGAGGGCCCCCTaGAGCAGGGAGGTCGCCAGGAGCCTTGGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: VVEGHGPAGRAP*SREVARSLGLW
Trigger: CCAGAGCCCAAGGCTCCTGGCGACCTCCCTGCTGCAGGGGGCCCTCCCAGCGGGGCCATGCCCTTCTACAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000371706.7
CDS GCA 72 bp GTTGTAGAAGGGCATGGCCCCGCTGGGAGGGCCCCCTaGAGCAGGGAGGTCGCCAGGAGCCTCTCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: VVEGHGPAGRAP*SREVARSLSSL
Trigger: CAGGGAGGAGAGGCTCCTGGCGACCTCCCTGCTGCAGGGGGCCCTCCCAGCGGGGCCATGCCCTTCTACAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453963.5
CDS CCA 72 bp AGCCCAGAACACGCTCCGAGGATTCCCGGCTGGAGGTaGCCCAGCCATGCCAGACGGGACCGTCTGGGGCGG +
Preference number: 6 (lower is better)
Translates to: SPEHAPRIPGWR*PSHARRDRLGR
Trigger: CCGCCCCAGACGGTCCCGTCTGGCATGGCTGGGCCACCTCCAGCCGGGAATCCTCGGAGCGTGTTCTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CCA 72 bp GAGGTGGCCGTTCCGAGGAGTGGCTGGCTCGGGAGCTaGGCCGCTCGGGCTCGGGATAGCGGTAGTTCTGGG +
Preference number: 6 (lower is better)
Translates to: EVAVPRSGWLGS*AARARDSGSSG
Trigger: CCCAGAACTACCGCTATCCCGAGCCCGAGCGGCCCAGCTCCCGAGCCAGCCACTCCTCGGAACGGCCACCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp ATCCTTGCCTGGGAGGTGGCCGTTCCGAGGAGTGGCTaGCTCGGGAGCTGGGCCGCTCGGGCTCGGGATAGC +
Preference number: 6 (lower is better)
Translates to: ILAWEVAVPRSG*LGSWAARARDS
Trigger: GCTATCCCGAGCCCGAGCGGCCCAGCTCCCGAGCCAGCCACTCCTCGGAACGGCCACCTCCCAGGCAAGGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS TCA 72 bp GGGCACCCCGCTGGGAACAGGTCCTTCAGGGCAGGGTaGACGATGTTGCCCCGAGGGCTGTGGGCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: GHPAGNRSFRAG*TMLPRGLWASL
Trigger: CAGGGAGGCCCACAGCCCTCGGGGCAACATCGTTCACCCTGCCCTGAAGGACCTGTTCCCAGCGGGGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS TCA 72 bp GGCAAGTGCAGGCACTGGCTGTGGCCACGGCTGCTCTaGCGGCACAGCTGCCTGGCCGGAGCCACTGGACAC +
Preference number: 6 (lower is better)
Translates to: GKCRHWLWPRLL*RHSCLAGATGH
Trigger: GTGTCCAGTGGCTCCGGCCAGGCAGCTGTGCCGTCAGAGCAGCCGTGGCCACAGCCAGTGCCTGCACTTGCC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp CCGGTAGTAGTAGTAGGCGGCCAGGTCCTGAGGCGGTaGGCCGGGGGCAAGTGCAGGCACTGGCTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: PVVVVGGQVLRR*AGGKCRHWLWP
Trigger: TGGCCACAGCCAGTGCCTGCACTTGCCCCCGGCCCACCGCCTCAGGACCTGGCCGCCTACTACTACTACCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp GCCCCGGGGGCAGTGGCACTGGGAACATCGGCACTCTaGCAGGACTGGCCAATGGGCCGTCAGGGAGCGTCT +
Preference number: 6 (lower is better)
Translates to: APGAVALGTSAL*QDWPMGRQGAS
Trigger: AGACGCTCCCTGACGGCCCATTGGCCAGTCCTGCCAGAGTGCCGATGTTCCCAGTGCCACTGCCCCCGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 72 bp GTTGTAGAAGGGCATGGCCCCGCTGGGAGGGCCCCCTaGAGCAGGGAGGTCGCCAGGAGCCTGAGAAGCACA +
Preference number: 6 (lower is better)
Translates to: VVEGHGPAGRAP*SREVARSLRST
Trigger: TGTGCTTCTCAGGCTCCTGGCGACCTCCCTGCTGCAGGGGGCCCTCCCAGCGGGGCCATGCCCTTCTACAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467838.2
CDS CCA 72 bp GCTGCTAGCCCAGAACACGCTCCGAGGATTCCCGGCTaGAGGTGGCCCAGCCATGCCAGACGGGACCGTCTG +
Preference number: 6 (lower is better)
Translates to: AASPEHAPRIPG*RWPSHARRDRL
Trigger: CAGACGGTCCCGTCTGGCATGGCTGGGCCACCTCCAGCCGGGAATCCTCGGAGCGTGTTCTGGGCTAGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CAA 72 bp CAATGCCACCTCGGCTCTGCACCGGGGCCGCCGAGCTaGGGTTCCGTGACTGCTGCCCGGACATCGCCTCTT +
Preference number: 6 (lower is better)
Translates to: QCHLGSAPGPPS*GSVTAARTSPL
Trigger: AAGAGGCGATGTCCGGGCAGCAGTCACGGAACCCAAGCTCGGCGGCCCCGGTGCAGAGCCGAGGTGGCATTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 90 bp CAGAAGCACCAATGCCACCTCGGCTCTGCACCGGGGCCGCCGAGCTaGGGTTCCGTGACTGCTGCCCGGACATCGCCTCTTCTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: QKHQCHLGSAPGPPS*GSVTAARTSPLLEA
Trigger: AGCCTCCAGAAGAGGCGATGTCCGGGCAGCAGTCACGGAACCCAAGCTCGGCGGCCCCGGTGCAGAGCCGAGGTGGCATTGGTGCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 90 bp GAGGCCGAGGGGGCAGCTGCTGACCCGCGTCGACCAGAACCAGACTaGCTGGTGACTGTGCTGAGTTCTGGGCCTGTCCCTGTGCGGGCA +
Preference number: 6 (lower is better)
Translates to: EAEGAAADPRRPEPD*LVTVLSSGPVPVRA
Trigger: TGCCCGCACAGGGACAGGCCCAGAACTCAGCACAGTCACCAGCAAGTCTGGTTCTGGTCGACGCGGGTCAGCAGCTGCCCCCTCGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp CCCGGGAACGCCCGCATCTCCTCCTGCTCAGACGTGTaGTGCAGCAAGGCCTCCATGCTGTGGACCTCCACC +
Preference number: 6 (lower is better)
Translates to: PGNARISSCSDV*CSKASMLWTST
Trigger: GGTGGAGGTCCACAGCATGGAGGCCTTGCTGCAGCACACGTCTGAGCAGGAGGAGATGCGGGCGTTCCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
ENST00000472305.1
CDS GCA 72 bp TTGGCCAGGGGTCCCGGGAACGCCCGCATCTCCTCCTaGTCAGACGTGTGCTGCAGCAAGGCCTCCATGCTG +
Preference number: 6 (lower is better)
Translates to: LARGPGNARISS*SDVCCSKASML
Trigger: CAGCATGGAGGCCTTGCTGCAGCACACGTCTGAGCAGGAGGAGATGCGGGCGTTCCCGGGACCCCTGGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
ENST00000472305.1
CDS CCA 72 bp GCTGGAGGTGGCCCAGCCATGCCAGACGGGACCGTCTaGGGCGGTGGCTGCATGACTGAACCCTTGCACAAG +
Preference number: 6 (lower is better)
Translates to: AGGGPAMPDGTV*GGGCMTEPLHK
Trigger: CTTGTGCAAGGGTTCAGTCATGCAGCCACCGCCCCAGACGGTCCCGTCTGGCATGGCTGGGCCACCTCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CCA 72 bp AGGAGCGAGAGCCGGCTCGCTCCGCTGGGTCCCGCTTaGGTTCAGGACGTCAACGTAGCGAGCTCTGGTTCC +
Preference number: 6 (lower is better)
Translates to: RSESRLAPLGPA*VQDVNVASSGS
Trigger: GGAACCAGAGCTCGCTACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGGAGCGAGCCGGCTCTCGCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 72 bp CAGGAGCGAGAGCCGGCTCGCTCCGCTGGGTCCCGCTaGGGTTCAGGACGTCAACGTAGCGAGCTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: QEREPARSAGSR*GSGRQRSELWF
Trigger: GAACCAGAGCTCGCTACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGGAGCGAGCCGGCTCTCGCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 72 bp GCACCAGGTGCTTCCTCTGGCCAATCCTCCCTAGCCTaGAGCTCCCGGAGGTGGCGCAGGCCTGTGCCAGCT +
Preference number: 6 (lower is better)
Translates to: APGASSGQSSLA*SSRRWRRPVPA
Trigger: AGCTGGCACAGGCCTGCGCCACCTCCGGGAGCTCAAGGCTAGGGAGGATTGGCCAGAGGAAGCACCTGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
ENST00000467838.2
CDS CAA 90 bp CAAAGTCCGCAGGAGCGAGAGCCGGCTCGCTCCGCTGGGTCCCGCTaGGGTTCAGGACGTCAACGTAGCGAGCTCTGGTTCCTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: QSPQEREPARSAGSR*GSGRQRSELWFLLL
Trigger: GAGCAGCAGGAACCAGAGCTCGCTACGTTGACGTCCTGAACCCAAGCGGGACCCAGCGGAGCGAGCCGGCTCTCGCTCCTGCGGACTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 90 bp CCTAGTTCAGCACCAGGTGCTTCCTCTGGCCAATCCTCCCTAGCCTaGAGCTCCCGGAGGTGGCGCAGGCCTGTGCCAGCTGAGCAGGGT +
Preference number: 6 (lower is better)
Translates to: PSSAPGASSGQSSLA*SSRRWRRPVPAEQG
Trigger: ACCCTGCTCAGCTGGCACAGGCCTGCGCCACCTCCGGGAGCTCAAGGCTAGGGAGGATTGGCCAGAGGAAGCACCTGGTGCTGAACTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000453963.5
ENST00000467838.2
CDS TCA 72 bp GGAGTGCCAGGACACTGCTGCGGGAGGGCTCCATCCTaGTGCCATACTCCAGCCCCCTCCTTAATCTGCCGC +
Preference number: 6 (lower is better)
Translates to: GVPGHCCGRAPS*CHTPAPSLICR
Trigger: GCGGCAGATTAAGGAGGGGGCTGGAGTATGGCATCAGGATGGAGCCCTCCCGCAGCAGTGTCCTGGCACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 72 bp GTGGCTCACCTCGTCTCTTCCGTCACTGGGCAAGGCTaGTGGGGGAGCCACCAGAGGGCTGTGTTGCTCATG +
Preference number: 6 (lower is better)
Translates to: VAHLVSSVTGQG*WGSHQRAVLLM
Trigger: CATGAGCAACACAGCCCTCTGGTGGCTCCCCCAGCAGCCTTGCCCAGTGACGGAAGAGACGAGGTGAGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp GGGGAAGCATCGGGCAGGGCGGCAGCTGGTCTGCACTaGTTCTGGCGGACACAGGTCTCCCTTACTTCACCA +
Preference number: 6 (lower is better)
Translates to: GEASGRAAAGLH*FWRTQVSLTSP
Trigger: TGGTGAAGTAAGGGAGACCTGTGTCCGCCAGAAGCAGTGCAGACCAGCTGCCGCCCTGCCCGATGCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp GCTCATGACCAGGGCCCTGATGTAGGATGGACGGGGTaGGGAAATGAGGAACGCTGGTGGCACAGGGCACCC +
Preference number: 6 (lower is better)
Translates to: AHDQGPDVGWTG*GNEERWWHRAP
Trigger: GGGTGCCCTGTGCCACCAGCGTTCCTCATTTCCCCACCCCGTCCATCCTACATCAGGGCCCTGGTCATGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp AGAGTCGTTGCTGGGCTCTCACACTTCACGGGCCCCTaGGTCCTGGCTGAAGGCCTCTTCTCGGGTGCTGGA +
Preference number: 6 (lower is better)
Translates to: RVVAGLSHFTGP*VLAEGLFSGAG
Trigger: TCCAGCACCCGAGAAGAGGCCTTCAGCCAGGACCCAGGGGCCCGTGAAGTGTGAGAGCCCAGCAACGACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp GTAGGTGCCGTAGGCAAAATCGCCGTGAAAGGAGCCTaGAGGAAGCGGGGCCTCGTAGGAACCGGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: VGAVGKIAVKGA*RKRGLVGTGSH
Trigger: GTGGCTGCCGGTTCCTACGAGGCCCCGCTTCCTCCAGGCTCCTTTCACGGCGATTTTGCCTACGGCACCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 72 bp GGCAGGCCAGACGGTGTCGGCAGGGTAGCCATACTCTaGGAAGCCGGGGCCACTGCTGAAATTGCTGCGGTA +
Preference number: 6 (lower is better)
Translates to: GRPDGVGRVAIL*EAGATAEIAAV
Trigger: TACCGCAGCAATTTCAGCAGTGGCCCCGGCTTCCCAGAGTATGGCTACCCTGCCGACACCGTCTGGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
ENST00000472305.1
CDS CCA 72 bp GCGCCTCCTGCGGCACTATCCCTGGGTCTGGGCTCCTaGCTTCCTGGAGCAAGTGTCTCCTTTCCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: APPAALSLGLGS*LPGASVSFPAE
Trigger: CTCTGCAGGAAAGGAGACACTTGCTCCAGGAAGCCAGGAGCCCAGACCCAGGGATAGTGCCGCAGGAGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 72 bp GATGCTCTTCGCGATGGCCTCACAGTAGTGGAAGGCTaGCGTGGCCAGCCCCATTTCCGCCAGGCGGCAGGA +
Preference number: 6 (lower is better)
Translates to: DALRDGLTVVEG*RGQPHFRQAAG
Trigger: TCCTGCCGCCTGGCGGAAATGGGGCTGGCCACGCAAGCCTTCCACTACTGTGAGGCCATCGCGAAGAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 72 bp CAAGGCCACAAGCGGGAAATCAGTCTGCAGGACCGATaGCAGCAGGCTCACGCACCGAGAACGGCTACTCCG +
Preference number: 6 (lower is better)
Translates to: QGHKREISLQDR*QQAHAPRTATP
Trigger: CGGAGTAGCCGTTCTCGGTGCGTGAGCCTGCTGGCATCGGTCCTGCAGACTGATTTCCCGCTTGTGGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290037.10
CDS GCA 72 bp CCAGCCATGCCAGACGGGACCGTCTGGGGCGGTGGCTaGATGACTGAACCCTTGCACAAGTCGATGCTGCTT +
Preference number: 6 (lower is better)
Translates to: PAMPDGTVWGGG*MTEPLHKSMLL
Trigger: AAGCAGCATCGACTTGTGCAAGGGTTCAGTCATGCAGCCACCGCCCCAGACGGTCCCGTCTGGCATGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS GCA 72 bp CGGGCGAGGGGGTTCACAAGAGCAGAGGCGGGCCGGTaGTCATTCTTCACTCCTGGATTCTGCCTGAGCTCT +
Preference number: 6 (lower is better)
Translates to: RARGFTRAEAGR*SFFTPGFCLSS
Trigger: AGAGCTCAGGCAGAATCCAGGAGTGAAGAATGAGCACCGGCCCGCCTCTGCTCTTGTGAACCCCCTCGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp GTATCCAAGGGCGGTGCCCCTGCGTGCGGAAGCATGTaGACAGCTTCCGTGGTGGAGTTAAGAGGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: VSKGGAPACGSM*TASVVELRGRG
Trigger: TCCCCTGCCTCTTAACTCCACCACGGAAGCTGTGCACATGCTTCCGCACGCAGGGGCACCGCCCTTGGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp GGGTGCTGGATACACAGTATCCAAGGGCGGTGCCCCTaGGTGCGGAAGCATGTGCACAGCTTCCGTGGTGGA +
Preference number: 6 (lower is better)
Translates to: GCWIHSIQGRCP*VRKHVHSFRGG
Trigger: TCCACCACGGAAGCTGTGCACATGCTTCCGCACGCAGGGGCACCGCCCTTGGATACTGTGTATCCAGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp CCGCTCCACCTGCTGCAGGTGAACCAGCCACGTGGGTaGGGCCAAGGACTCCTCTTCTGGCTTCTCTTTCAG +
Preference number: 6 (lower is better)
Translates to: PLHLLQVNQPRG*GQGLLFWLLFQ
Trigger: CTGAAAGAGAAGCCAGAAGAGGAGTCCTTGGCCGCACCCACGTGGCTGGTTCACCTGCAGCAGGTGGAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 72 bp ACAGACCTGGGGTGCACAGAGGGTCTCCATGTTGTCTaGTGGCTGCTCCAGGTTGCCAGGGGAAGCATCGGG +
Preference number: 6 (lower is better)
Translates to: TDLGCTEGLHVV*WLLQVARGSIG
Trigger: CCCGATGCTTCCCCTGGCAACCTGGAGCAGCCACCAGACAACATGGAGACCCTCTGTGCACCCCAGGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp TCTTCGCGATGGCCTCACAGTAGTGGAAGGCTTGCGTaGCCAGCCCCATTTCCGCCAGGCGGCAGGAGTAGA +
Preference number: 6 (lower is better)
Translates to: SSRWPHSSGRLA*PAPFPPGGRSR
Trigger: TCTACTCCTGCCGCCTGGCGGAAATGGGGCTGGCCACGCAAGCCTTCCACTACTGTGAGGCCATCGCGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 72 bp TCTGCCGCTCCACCTGCTGCAGGTGAACCAGCCACGTaGGTGCGGCCAAGGACTCCTCTTCTGGCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: SAAPPAAGEPAT*VRPRTPLLASL
Trigger: AAGAGAAGCCAGAAGAGGAGTCCTTGGCCGCACCCACGTGGCTGGTTCACCTGCAGCAGGTGGAGCGGCAGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 72 bp GGATGCTGCTGGGGTGACCACACCGTCATGTGGGTTTaGCCTGCTCAGGGGTCGGTCGAGCCCAGGCATGTT +
Preference number: 6 (lower is better)
Translates to: GCCWGDHTVMWV*PAQGSVEPRHV
Trigger: AACATGCCTGGGCTCGACCGACCCCTGAGCAGGCAAAACCCACATGACGGTGTGGTCACCCCAGCAGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
CDS CAA 90 bp CGTTGCCTCCAAAATCTGGCAGCTCACTTTGCGCCCACAGAGTCGTaGCTGGGCTCTCACACTTCACGGGCCCCTGGGTCCTGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: RCLQNLAAHFAPTES*LGSHTSRAPGSWLK
Trigger: CTTCAGCCAGGACCCAGGGGCCCGTGAAGTGTGAGAGCCCAGCAACGACTCTGTGGGCGCAAAGTGAGCTGCCAGATTTTGGAGGCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 90 bp TGCAGGGGCCAGAAGGACGTTGCCTCCAAAATCTGGCAGCTCACTTaGCGCCCACAGAGTCGTTGCTGGGCTCTCACACTTCACGGGCCC +
Preference number: 6 (lower is better)
Translates to: CRGQKDVASKIWQLT*RPQSRCWALTLHGP
Trigger: GGGCCCGTGAAGTGTGAGAGCCCAGCAACGACTCTGTGGGCGCAAAGTGAGCTGCCAGATTTTGGAGGCAACGTCCTTCTGGCCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 90 bp CTGCGTCAGGATGCTCTTCGCGATGGCCTCACAGTAGTGGAAGGCTaGCGTGGCCAGCCCCATTTCCGCCAGGCGGCAGGAGTAGATGAA +
Preference number: 6 (lower is better)
Translates to: LRQDALRDGLTVVEG*RGQPHFRQAAGVDE
Trigger: TTCATCTACTCCTGCCGCCTGGCGGAAATGGGGCTGGCCACGCAAGCCTTCCACTACTGTGAGGCCATCGCGAAGAGCATCCTGACGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS TCA 72 bp GCCAGACGGGACCGTCTGGGGCGGTGGCTGCATGACTaGACCCTTGCACAAGTCGATGCTGCTTACAGAAGG +
Preference number: 6 (lower is better)
Translates to: ARRDRLGRWLHD*TLAQVDAAYRR
Trigger: CCTTCTGTAAGCAGCATCGACTTGTGCAAGGGTTCAGTCATGCAGCCACCGCCCCAGACGGTCCCGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS TCA 72 bp CCATGCCAGACGGGACCGTCTGGGGCGGTGGCTGCATaGCTGAACCCTTGCACAAGTCGATGCTGCTTACAG +
Preference number: 6 (lower is better)
Translates to: PCQTGPSGAVAA*LNPCTSRCCLQ
Trigger: CTGTAAGCAGCATCGACTTGTGCAAGGGTTCAGTCATGCAGCCACCGCCCCAGACGGTCCCGTCTGGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS GCA 72 bp CGTGGTGGAGTTAAGAGGCAGGGGACAGACCTGGGGTaGACAGAGGGTCTCCATGTTGTCTGGTGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: RGGVKRQGTDLG*TEGLHVVWWLL
Trigger: GAGCAGCCACCAGACAACATGGAGACCCTCTGTGCACCCCAGGTCTGTCCCCTGCCTCTTAACTCCACCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp CTTAGCTCGGAAAGTGAGTTTCCAACAGGCGCCTCCTaGGGCACTATCCCTGGGTCTGGGCTCCTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: LSSESEFPTGAS*GTIPGSGLLAS
Trigger: GGAAGCCAGGAGCCCAGACCCAGGGATAGTGCCGCAGGAGGCGCCTGTTGGAAACTCACTTTCCGAGCTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 72 bp GGAAATGAGGAACGCTGGTGGCACAGGGCACCCCGCTaGGAACAGGTCCTTCAGGGCAGGGTGAACGATGTT +
Preference number: 6 (lower is better)
Translates to: GNEERWWHRAPR*EQVLQGRVNDV
Trigger: AACATCGTTCACCCTGCCCTGAAGGACCTGTTCCCAGCGGGGTGCCCTGTGCCACCAGCGTTCCTCATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp GGCTGCAGGGGCCAGAAGGACGTTGCCTCCAAAATCTaGCAGCTCACTTTGCGCCCACAGAGTCGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: GCRGQKDVASKI*QLTLRPQSRCW
Trigger: CCAGCAACGACTCTGTGGGCGCAAAGTGAGCTGCCAGATTTTGGAGGCAACGTCCTTCTGGCCCCTGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp AATACAGGTGCGGCTGCGTCAGGATGCTCTTCGCGATaGCCTCACAGTAGTGGAAGGCTTGCGTGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: NTGAAASGCSSR*PHSSGRLAWPA
Trigger: GGCTGGCCACGCAAGCCTTCCACTACTGTGAGGCCATCGCGAAGAGCATCCTGACGCAGCCGCACCTGTATT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 72 bp TGCGGCACTATCCCTGGGTCTGGGCTCCTGGCTTCCTaGAGCAAGTGTCTCCTTTCCTGCAGAGGTGGCACA +
Preference number: 6 (lower is better)
Translates to: CGTIPGSGLLAS*SKCLLSCRGGT
Trigger: TGTGCCACCTCTGCAGGAAAGGAGACACTTGCTCCAGGAAGCCAGGAGCCCAGACCCAGGGATAGTGCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 72 bp AGAGCGAGGAGGCCATCATTCCGTCCCGAACGTCCCTaGGGTCTCACTGAAGACACTGGGGTTGGCACGAAC +
Preference number: 6 (lower is better)
Translates to: RARRPSFRPERP*GLTEDTGVGTN
Trigger: GTTCGTGCCAACCCCAGTGTCTTCAGTGAGACCCCAGGGACGTTCGGGACGGAATGATGGCCTCCTCGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313084.9
CDS CAA 90 bp CGGACATCGCCTCTTCTGGAGGCTGAACAACAGGTGGCTGAGGTTTaGCACACACATAAAGCGCCGGGGCTGCAGGGGCCAGAAGGACGT +
Preference number: 6 (lower is better)
Translates to: RTSPLLEAEQQVAEV*HTHKAPGLQGPEGR
Trigger: ACGTCCTTCTGGCCCCTGCAGCCCCGGCGCTTTATGTGTGTGCAAAACCTCAGCCACCTGTTGTTCAGCCTCCAGAAGAGGCGATGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS TCA 72 bp CAGGGTAGCCATACTCTGGGAAGCCGGGGCCACTGCTaGAATTGCTGCGGTAGGTGCCGTAGGCAAAATCGC +
Preference number: 6 (lower is better)
Translates to: QGSHTLGSRGHC*NCCGRCRRQNR
Trigger: GCGATTTTGCCTACGGCACCTACCGCAGCAATTTCAGCAGTGGCCCCGGCTTCCCAGAGTATGGCTACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS TCA 72 bp CCCGTCTGGAAGCTGTGGTTCTTCTGCATCTGGGGATaGGAGAGCGAGGAGGCCATCATTCCGTCCCGAACG +
Preference number: 6 (lower is better)
Translates to: PVWKLWFFCIWG*ESEEAIIPSRT
Trigger: CGTTCGGGACGGAATGATGGCCTCCTCGCTCTCTCATCCCCAGATGCAGAAGAACCACAGCTTCCAGACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313084.9
CDS GCA 72 bp GCTGGATACACAGTATCCAAGGGCGGTGCCCCTGCGTaGGGAAGCATGTGCACAGCTTCCGTGGTGGAGTTA +
Preference number: 6 (lower is better)
Translates to: AGYTVSKGGAPA*GSMCTASVVEL
Trigger: TAACTCCACCACGGAAGCTGTGCACATGCTTCCGCACGCAGGGGCACCGCCCTTGGATACTGTGTATCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp TTTTGGGAGGATTCTCAAGGTTCTCAGAAGCACCAATaGCACCTCGGCTCTGCACCGGGGCCGCCGAGCTTG +
Preference number: 6 (lower is better)
Translates to: FWEDSQGSQKHQ*HLGSAPGPPSL
Trigger: CAAGCTCGGCGGCCCCGGTGCAGAGCCGAGGTGGCATTGGTGCTTCTGAGAACCTTGAGAATCCTCCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp CTCCCCAGAATCACCACCGAGAGCCCAACTGCTGACTaGAGGTCTATCCCCCACCAAAGCCTCTCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: LPRITTESPTAD*RSIPHQSLSPG
Trigger: TCCTGGAGAGAGGCTTTGGTGGGGGATAGACCTGCAGTCAGCAGTTGGGCTCTCGGTGGTGATTCTGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp TGCACAAGCTGGCTGATCAACACCGGGGAATACAGGTaGGGCTGCGTCAGGATGCTCTTCGCGATGGCCTCA +
Preference number: 6 (lower is better)
Translates to: CTSWLINTGEYR*GCVRMLFAMAS
Trigger: TGAGGCCATCGCGAAGAGCATCCTGACGCAGCCGCACCTGTATTCCCCGGTGTTGATCAGCCAGCTTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 72 bp TGGATGACACGCTGTCAGGGTGCACTGTATGCAGTGTaGCATCAGGGGCTCCGGTGTGGCACACAGCACCAT +
Preference number: 6 (lower is better)
Translates to: WMTRCQGALYAV*HQGLRCGTQHH
Trigger: ATGGTGCTGTGTGCCACACCGGAGCCCCTGATGCCACACTGCATACAGTGCACCCTGACAGCGTGTCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp ATCCTGGTAATAGAGGGAGGCTGCGCCAGGCTCCGGTaGGTACGGCAAAGAGTACTGAGGCTGGTAGGCATC +
Preference number: 6 (lower is better)
Translates to: ILVIEGGCARLR*VRQRVLRLVGI
Trigger: GATGCCTACCAGCCTCAGTACTCTTTGCCGTACCCACCGGAGCCTGGCGCAGCCTCCCTCTATTACCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp CACGAACAAGTTAGAAGGAATTGGGAGTGGCGCGAGTaGAGCGACAAAGTCCGCAGGAGCGAGAGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: HEQVRRNWEWRE*SDKVRRSESRL
Trigger: GAGCCGGCTCTCGCTCCTGCGGACTTTGTCGCTCCACTCGCGCCACTCCCAATTCCTTCTAACTTGTTCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 72 bp GGGACCGTCTGGGGCGGTGGCTGCATGACTGAACCCTaGCACAAGTCGATGCTGCTTACAGAAGGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: GTVWGGGCMTEP*HKSMLLTEGSR
Trigger: CCTGCTTCCTTCTGTAAGCAGCATCGACTTGTGCAAGGGTTCAGTCATGCAGCCACCGCCCCAGACGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CAA 72 bp CCTCTTCTGGAGGCTGAACAACAGGTGGCTGAGGTTTaGCACACACATAAAGCGCCGGGGCTGCAGGGGCCA +
Preference number: 6 (lower is better)
Translates to: PLLEAEQQVAEV*HTHKAPGLQGP
Trigger: TGGCCCCTGCAGCCCCGGCGCTTTATGTGTGTGCAAAACCTCAGCCACCTGTTGTTCAGCCTCCAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 90 bp GAAAACCCTGCGGGGGCTGGGCCTTGCAAGACAGGTGGACTGCTTTaGGACGAACTGCCCAGTGGTGTACTTTGGAGCGCCTGTCTACTA +
Preference number: 6 (lower is better)
Translates to: ENPAGAGPCKTGGLL*DELPSGVLWSACLL
Trigger: TAGTAGACAGGCGCTCCAAAGTACACCACTGGGCAGTTCGTCCAAAAGCAGTCCACCTGTCTTGCAAGGCCCAGCCCCCGCAGGGTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS GCA 72 bp GGGCCTGTCCCCGAAGGCAGAGTGCTCTCTCCTGTATaGGTCATACTCTGCATCACACCAATACCTCCGGTC +
Preference number: 6 (lower is better)
Translates to: GPVPEGRVLSPV*VILCITPIPPV
Trigger: GACCGGAGGTATTGGTGTGATGCAGAGTATGACGCATACAGGAGAGAGCACTCTGCCTTCGGGGACAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 72 bp TCAACACCGGGGAATACAGGTGCGGCTGCGTCAGGATaGTCTTCGCGATGGCCTCACAGTAGTGGAAGGCTT +
Preference number: 6 (lower is better)
Translates to: STPGNTGAAASG*SSRWPHSSGRL
Trigger: AAGCCTTCCACTACTGTGAGGCCATCGCGAAGAGCATCCTGACGCAGCCGCACCTGTATTCCCCGGTGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 72 bp TGGGGTTGGCACGAACAAGTTAGAAGGAATTGGGAGTaGCGCGAGTGGAGCGACAAAGTCCGCAGGAGCGAG +
Preference number: 6 (lower is better)
Translates to: WGWHEQVRRNWE*REWSDKVRRSE
Trigger: CTCGCTCCTGCGGACTTTGTCGCTCCACTCGCGCCACTCCCAATTCCTTCTAACTTGTTCGTGCCAACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000313084.9
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 72 bp TGCAGGCCCTTCCCTGCCAGTCCCGTCTGGAAGCTGTaGTTCTTCTGCATCTGGGGTTGGCACGAACAAGTT +
Preference number: 6 (lower is better)
Translates to: CRPFPASPVWKL*FFCIWGWHEQV
Trigger: AACTTGTTCGTGCCAACCCCAGATGCAGAAGAACCACAGCTTCCAGACGGGACTGGCAGGGAAGGGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 72 bp AAACTCCCCGTGAAGCGAGGATCGTACCTCCAGTTGTaGTCACGTTTCTCGGGCCTGTCCCCGAAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: KLPVKRGSYLQL*SRFSGLSPKAE
Trigger: CTCTGCCTTCGGGGACAGGCCCGAGAAACGTGACAACAACTGGAGGTACGATCCTCGCTTCACGGGGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 90 bp GTTAGGCGCCCCAGGCCCAGATTGTCTGGGATGACTGGCAACACTTaGCTGAGAAGCGAGGCTGTCAGAATGGGACGGGTTGTACACGTT +
Preference number: 6 (lower is better)
Translates to: VRRPRPRLSGMTGNT*LRSEAVRMGRVVHV
Trigger: AACGTGTACAACCCGTCCCATTCTGACAGCCTCGCTTCTCAGCAAAGTGTTGCCAGTCATCCCAGACAATCTGGGCCTGGGGCGCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 90 bp GTGTCGCCCATGGTAGCCATCGTCCTGGACTCGACGTCCATGTTGTaGTTCAAGTTGGACAAGACCATGGCGAGGTGCGGCCTCCAATCT +
Preference number: 6 (lower is better)
Translates to: VSPMVAIVLDSTSML*FKLDKTMARCGLQS
Trigger: AGATTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACTTGAACAACAACATGGACGTCGAGTCCAGGACGATGGCTACCATGGGCGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 90 bp AGAGTGTCGCCCATGGTAGCCATCGTCCTGGACTCGACGTCCATGTaGTTGTTCAAGTTGGACAAGACCATGGCGAGGTGCGGCCTCCAA +
Preference number: 6 (lower is better)
Translates to: RVSPMVAIVLDSTSM*LFKLDKTMARCGLQ
Trigger: TTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACTTGAACAACAACATGGACGTCGAGTCCAGGACGATGGCTACCATGGGCGACACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS TCA 72 bp CGGGCCGGTGCTCATTCTTCACTCCTGGATTCTGCCTaGGCTCTGGGCTTGCCCAGTGATTCACAATTCTGG +
Preference number: 6 (lower is better)
Translates to: RAGAHSSLLDSA*ALGLPSDSQFW
Trigger: CCAGAATTGTGAATCACTGGGCAAGCCCAGAGCTCAGGCAGAATCCAGGAGTGAAGAATGAGCACCGGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS TCA 72 bp TTTTCTTCGTGTAAACACCAAATCCCGCCTGGGCCATaGGGTAGCAGAAGTGGGCCGCATCCAAGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: FSSCKHQIPPGP*GSRSGPHPRGP
Trigger: GGGGCCTCTTGGATGCGGCCCACTTCTGCTACCTCATGGCCCAGGCGGGATTTGGTGTTTACACGAAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS TCA 72 bp AGAGTCGTAACTGGGAAGCCATCTGCACAAGCTGGCTaGTCAACACCGGGGAATACAGGTGCGGCTGCGTCA +
Preference number: 6 (lower is better)
Translates to: RVVTGKPSAQAG*STPGNTGAAAS
Trigger: TGACGCAGCCGCACCTGTATTCCCCGGTGTTGATCAGCCAGCTTGTGCAGATGGCTTCCCAGTTACGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 72 bp GACCGGCTGCAACGGGCAAGTTGTCGGAGCCACTGCTaGATTATTATTAGCCCGTCTCCTGTAAGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: DRLQRASCRSHC*IIISPSPVRAA
Trigger: AGCAGCCCTTACAGGAGACGGGCTAATAATAATGCAGCAGTGGCTCCGACAACTTGCCCGTTGCAGCCGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS GCA 72 bp CGTGACCGGCTGCAACGGGCAAGTTGTCGGAGCCACTaGTGCATTATTATTAGCCCGTCTCCTGTAAGGGCT +
Preference number: 6 (lower is better)
Translates to: RDRLQRASCRSH*CIIISPSPVRA
Trigger: AGCCCTTACAGGAGACGGGCTAATAATAATGCAGCAGTGGCTCCGACAACTTGCCCGTTGCAGCCGGTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS GCA 72 bp ATAGAGGCTGTAGACATCCTGGTAATAGAGGGAGGCTaGGCCAGGCTCCGGTGGGTACGGCAAAGAGTACTG +
Preference number: 6 (lower is better)
Translates to: IEAVDILVIEGG*ARLRWVRQRVL
Trigger: CAGTACTCTTTGCCGTACCCACCGGAGCCTGGCGCAGCCTCCCTCTATTACCAGGATGTCTACAGCCTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp ATTCTAAGTTCTCAACATTCTCATACTGCGAGCCGCTaGCATCCGGCACCCCTGTGCTCGCTGTGTCACCCC +
Preference number: 6 (lower is better)
Translates to: ILSSQHSHTASR*HPAPLCSLCHP
Trigger: GGGGTGACACAGCGAGCACAGGGGTGCCGGATGCCAGCGGCTCGCAGTATGAGAATGTTGAGAACTTAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp AGCCTGAGAGCCTTCCGTGGCTTCTGCTGCTATAGCTaGATGACACGCTGTCAGGGTGCACTGTATGCAGTG +
Preference number: 6 (lower is better)
Translates to: SLRAFRGFCCYS*MTRCQGALYAV
Trigger: CACTGCATACAGTGCACCCTGACAGCGTGTCATCCAGCTATAGCAGCAGAAGCCACGGAAGGCTCTCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp AGACACTGGGGTTGGCACGAACAAGTTAGAAGGAATTaGGAGTGGCGCGAGTGGAGCGACAAAGTCCGCAGG +
Preference number: 6 (lower is better)
Translates to: RHWGWHEQVRRN*EWREWSDKVRR
Trigger: CCTGCGGACTTTGTCGCTCCACTCGCGCCACTCCCAATTCCTTCTAACTTGTTCGTGCCAACCCCAGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313084.9
CDS CCA 72 bp TGCATCTGGGGTTGGCACGAACAAGTTAGAAGGAATTaGGAGTGGCGCGAGTGGAGCGACAAAGTCCGCAGG +
Preference number: 6 (lower is better)
Translates to: CIWGWHEQVRRN*EWREWSDKVRR
Trigger: CCTGCGGACTTTGTCGCTCCACTCGCGCCACTCCCAATTCCTTCTAACTTGTTCGTGCCAACCCCAGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277537.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 72 bp CCCAGGCCCAGATTGTCTGGGATGACTGGCAACACTTaGCTGAGAAGCGAGGCTGTCAGAATGGGACGGGTT +
Preference number: 6 (lower is better)
Translates to: PRPRLSGMTGNT*LRSEAVRMGRV
Trigger: AACCCGTCCCATTCTGACAGCCTCGCTTCTCAGCAAAGTGTTGCCAGTCATCCCAGACAATCTGGGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 72 bp CCTTCGTTTCTTTCTTGGCTGCCTGTCCGGGTCTCTTaGTTTCGGGAGCGGGTGAGAGAGACAGAGGTGGCT +
Preference number: 6 (lower is better)
Translates to: PSFLSWLPVRVS*FRERVRETEVA
Trigger: AGCCACCTCTGTCTCTCTCACCCGCTCCCGAAACAAAGAGACCCGGACAGGCAGCCAAGAAAGAAACGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 90 bp GACCTGCTGATAAAAACGGTCAAGGTTAGGCGCCCCAGGCCCAGATaGTCTGGGATGACTGGCAACACTTTGCTGAGAAGCGAGGCTGTC +
Preference number: 6 (lower is better)
Translates to: DLLIKTVKVRRPRPR*SGMTGNTLLRSEAV
Trigger: GACAGCCTCGCTTCTCAGCAAAGTGTTGCCAGTCATCCCAGACAATCTGGGCCTGGGGCGCCTAACCTTGACCGTTTTTATCAGCAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 90 bp GTGCTGAGTTCTGGGCCTGTCCCTGTGCGGGCAGACTTTCTGGATTaGACAGCTCCGAAAACATGGCTTTGGGTAGTTGTGGGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: VLSSGPVPVRADFLD*TAPKTWLWVVVGEK
Trigger: CTTCTCCCCCACAACTACCCAAAGCCATGTTTTCGGAGCTGTCAAATCCAGAAAGTCTGCCCGCACAGGGACAGGCCCAGAACTCAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS TCA 72 bp CAGGTAGCCAACGAAAGAACCAGGATTCACCTTCTGTaGGGCCCCAGAGTCGCCAGATCCACAGAGACACCA +
Preference number: 6 (lower is better)
Translates to: QVANERTRIHLL*GPRVARSTETP
Trigger: TGGTGTCTCTGTGGATCTGGCGACTCTGGGGCCTCACAGAAGGTGAATCCTGGTTCTTTCGTTGGCTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313084.9
CDS GCA 72 bp GATTCTTCAATCAAGGCCACAAGCGGGAAATCAGTCTaGAGGACCGATGCCAGCAGGCTCACGCACCGAGAA +
Preference number: 6 (lower is better)
Translates to: DSSIKATSGKSV*RTDASRLTHRE
Trigger: TTCTCGGTGCGTGAGCCTGCTGGCATCGGTCCTGCAGACTGATTTCCCGCTTGTGGCCTTGATTGAAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290037.10
CDS GCA 72 bp TCAGGATCAGAGTTATTGGCCAGGTGGCTTCCACTTTaGAAGTGGCTCACCTCGTCTCTTCCGTCACTGGGC +
Preference number: 6 (lower is better)
Translates to: SGSELLARWLPL*KWLTSSLPSLG
Trigger: GCCCAGTGACGGAAGAGACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCTGGCCAATAACTCTGATCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp AGAAGGACGTTGCCTCCAAAATCTGGCAGCTCACTTTaGGCCCACAGAGTCGTTGCTGGGCTCTCACACTTC +
Preference number: 6 (lower is better)
Translates to: RRTLPPKSGSSL*AHRVVAGLSHF
Trigger: GAAGTGTGAGAGCCCAGCAACGACTCTGTGGGCGCAAAGTGAGCTGCCAGATTTTGGAGGCAACGTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp GAAGGCAGAGTGCTCTCTCCTGTATGCGTCATACTCTaGATCACACCAATACCTCCGGTCATAGGTGCGGGG +
Preference number: 6 (lower is better)
Translates to: EGRVLSPVCVIL*ITPIPPVIGAG
Trigger: CCCCGCACCTATGACCGGAGGTATTGGTGTGATGCAGAGTATGACGCATACAGGAGAGAGCACTCTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 72 bp TTGTCACGTTTCTCGGGCCTGTCCCCGAAGGCAGAGTaGTCTCTCCTGTATGCGTCATACTCTGCATCACAC +
Preference number: 6 (lower is better)
Translates to: LSRFSGLSPKAE*SLLYASYSASH
Trigger: GTGTGATGCAGAGTATGACGCATACAGGAGAGAGCACTCTGCCTTCGGGGACAGGCCCGAGAAACGTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS GCA 72 bp AGCAGGGCTGCGCTGCACAGCAGCTGTCACTTCAAGTaGAGATACAGACACCGCTTCTGGGTGGGATTTACA +
Preference number: 6 (lower is better)
Translates to: SRAALHSSCHFK*RYRHRFWVGFT
Trigger: TGTAAATCCCACCCAGAAGCGGTGTCTGTATCTGCACTTGAAGTGACAGCTGCTGTGCAGCGCAGCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467838.2
CDS GCA 72 bp GAGAAGCACAGAGAAGTCACCTCAGCAGGGCTGCGCTaGACAGCAGCTGTCACTTCAAGTGCAGATACAGAC +
Preference number: 6 (lower is better)
Translates to: EKHREVTSAGLR*TAAVTSSADTD
Trigger: GTCTGTATCTGCACTTGAAGTGACAGCTGCTGTGCAGCGCAGCCCTGCTGAGGTGACTTCTCTGTGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467838.2
CDS GCA 72 bp AGCCTGAGAAGCACAGAGAAGTCACCTCAGCAGGGCTaGGCTGCACAGCAGCTGTCACTTCAAGTGCAGATA +
Preference number: 6 (lower is better)
Translates to: SLRSTEKSPQQG*AAQQLSLQVQI
Trigger: TATCTGCACTTGAAGTGACAGCTGCTGTGCAGCGCAGCCCTGCTGAGGTGACTTCTCTGTGCTTCTCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467838.2
CDS GCA 72 bp AGCAGTGATGTCTGCAAGGCCGGGCTCACAAAGAAATaGCTCAACAAGGAACATACTTGGCCAGGGGTCCCG +
Preference number: 6 (lower is better)
Translates to: SSDVCKAGLTKK*LNKEHTWPGVP
Trigger: CGGGACCCCTGGCCAAGTATGTTCCTTGTTGAGGCATTTCTTTGTGAGCCCGGCCTTGCAGACATCACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472305.1
CDS CCA 72 bp TCAGAGTTATTGGCCAGGTGGCTTCCACTTTGCAAGTaGCTCACCTCGTCTCTTCCGTCACTGGGCAAGGCT +
Preference number: 6 (lower is better)
Translates to: SELLARWLPLCK*LTSSLPSLGKA
Trigger: AGCCTTGCCCAGTGACGGAAGAGACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCTGGCCAATAACTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp GCTGGGACACGCTGCCACGGTAATTCTGGCTCACAGTaGTCTCGTCTGTTTCACCTCCTACGGGAGAAGAAT +
Preference number: 6 (lower is better)
Translates to: AGTRCHGNSGSQ*SRLFHLLREKN
Trigger: ATTCTTCTCCCGTAGGAGGTGAAACAGACGAGACCACTGTGAGCCAGAATTACCGTGGCAGCGTGTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp ACCAGAACCAGACTTGCTGGTGACTGTGCTGAGTTCTaGGCCTGTCCCTGTGCGGGCAGACTTTCTGGATTT +
Preference number: 6 (lower is better)
Translates to: TRTRLAGDCAEF*ACPCAGRLSGF
Trigger: AAATCCAGAAAGTCTGCCCGCACAGGGACAGGCCCAGAACTCAGCACAGTCACCAGCAAGTCTGGTTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp TCATTGGGCGACTTCCCAGGAAGCCACACTGTTCTGTaGTCTCGTAACAGAAGCTCCGCAATGTCGGTCCCT +
Preference number: 6 (lower is better)
Translates to: SLGDFPGSHTVL*SRNRSSAMSVP
Trigger: AGGGACCGACATTGCGGAGCTTCTGTTACGAGACCACAGAACAGTGTGGCTTCCTGGGAAGTCGCCCAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
ENST00000472305.1
CDS CCA 72 bp CATGAGCTGGTAGACTGTCTGCAGAGGGTCGTTGATTaGGAGGCTGTTAGCAAACCTGGTCATGACTCGGGC +
Preference number: 6 (lower is better)
Translates to: HELVDCLQRVVD*EAVSKPGHDSG
Trigger: GCCCGAGTCATGACCAGGTTTGCTAACAGCCTCCCAATCAACGACCCTCTGCAGACAGTCTACCAGCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 72 bp TCGTCCTGGACTCGACGTCCATGTTGTTGTTCAAGTTaGACAAGACCATGGCGAGGTGCGGCCTCCAATCTC +
Preference number: 6 (lower is better)
Translates to: SSWTRRPCCCSS*TRPWRGAASNL
Trigger: GAGATTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACTTGAACAACAACATGGACGTCGAGTCCAGGACGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 72 bp CAGAAGGACGTTGCCTCCAAAATCTGGCAGCTCACTTaGCGCCCACAGAGTCGTTGCTGGGCTCTCACACTT +
Preference number: 6 (lower is better)
Translates to: QKDVASKIWQLT*RPQSRCWALTL
Trigger: AAGTGTGAGAGCCCAGCAACGACTCTGTGGGCGCAAAGTGAGCTGCCAGATTTTGGAGGCAACGTCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 72 bp ATGGTAGCCATCGTCCTGGACTCGACGTCCATGTTGTaGTTCAAGTTGGACAAGACCATGGCGAGGTGCGGC +
Preference number: 6 (lower is better)
Translates to: MVAIVLDSTSML*FKLDKTMARCG
Trigger: GCCGCACCTCGCCATGGTCTTGTCCAACTTGAACAACAACATGGACGTCGAGTCCAGGACGATGGCTACCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 72 bp CCCATGGTAGCCATCGTCCTGGACTCGACGTCCATGTaGTTGTTCAAGTTGGACAAGACCATGGCGAGGTGC +
Preference number: 6 (lower is better)
Translates to: PMVAIVLDSTSM*LFKLDKTMARC
Trigger: GCACCTCGCCATGGTCTTGTCCAACTTGAACAACAACATGGACGTCGAGTCCAGGACGATGGCTACCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 90 bp ATGGTAGCCATCGTCCTGGACTCGACGTCCATGTTGTTGTTCAAGTaGGACAAGACCATGGCGAGGTGCGGCCTCCAATCTCCCCATTTC +
Preference number: 6 (lower is better)
Translates to: MVAIVLDSTSMLLFK*DKTMARCGLQSPHF
Trigger: GAAATGGGGAGATTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACTTGAACAACAACATGGACGTCGAGTCCAGGACGATGGCTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS TCA 72 bp CATGCTGTGGACCTCCACCAAGGCCGGCTGTCCTTCTaGAGGCAGATTGGGAATCACTTTGATAAGCTGACC +
Preference number: 6 (lower is better)
Translates to: HAVDLHQGRLSF*RQIGNHFDKLT
Trigger: GGTCAGCTTATCAAAGTGATTCCCAATCTGCCTTCAGAAGGACAGCCGGCCTTGGTGGAGGTCCACAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
ENST00000472305.1
CDS GCA 72 bp GCCTGTCTACTAAAAGCAAATGGATCCGTGACCGGCTaGAACGGGCAAGTTGTCGGAGCCACTGCTGCATTA +
Preference number: 6 (lower is better)
Translates to: ACLLKANGSVTG*NGQVVGATAAL
Trigger: TAATGCAGCAGTGGCTCCGACAACTTGCCCGTTGCAGCCGGTCACGGATCCATTTGCTTTTAGTAGACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CCA 72 bp TGGTGTACTTTGGAGCGCCTGTCTACTAAAAGCAAATaGATCCGTGACCGGCTGCAACGGGCAAGTTGTCGG +
Preference number: 6 (lower is better)
Translates to: WCTLERLSTKSK*IRDRLQRASCR
Trigger: CCGACAACTTGCCCGTTGCAGCCGGTCACGGATCCATTTGCTTTTAGTAGACAGGCGCTCCAAAGTACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CCA 72 bp GGCGGACACAGGTCTCCCTTACTTCACCAACCACGTTaGCGCGATCTGCCTCAAATGGTTTTACCCCAACTA +
Preference number: 6 (lower is better)
Translates to: GGHRSPLLHQPR*RDLPQMVLPQL
Trigger: TAGTTGGGGTAAAACCATTTGAGGCAGATCGCGCCAACGTGGTTGGTGAAGTAAGGGAGACCTGTGTCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp CGACGTCCATGTTGTTGTTCAAGTTGGACAAGACCATaGCGAGGTGCGGCCTCCAATCTCCCCATTTCTCGT +
Preference number: 6 (lower is better)
Translates to: RRPCCCSSWTRP*RGAASNLPISR
Trigger: ACGAGAAATGGGGAGATTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACTTGAACAACAACATGGACGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 72 bp TTCAGGATCAGAGTTATTGGCCAGGTGGCTTCCACTTaGCAAGTGGCTCACCTCGTCTCTTCCGTCACTGGG +
Preference number: 6 (lower is better)
Translates to: FRIRVIGQVAST*QVAHLVSSVTG
Trigger: CCCAGTGACGGAAGAGACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCTGGCCAATAACTCTGATCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 72 bp TGGCGGACACAGGTCTCCCTTACTTCACCAACCACGTaGGCGCGATCTGCCTCAAATGGTTTTACCCCAACT +
Preference number: 6 (lower is better)
Translates to: WRTQVSLTSPTT*ARSASNGFTPT
Trigger: AGTTGGGGTAAAACCATTTGAGGCAGATCGCGCCAACGTGGTTGGTGAAGTAAGGGAGACCTGTGTCCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 72 bp GGGCTCCGTAAGTGTCTTCCTGATGACTGGAATGGTTaGCCTTATTACCATCAGGCACCAGGGTGCCGTGTG +
Preference number: 6 (lower is better)
Translates to: GLRKCLPDDWNG*PYYHQAPGCRV
Trigger: CACACGGCACCCTGGTGCCTGATGGTAATAAGGCAAACCATTCCAGTCATCAGGAAGACACTTACGGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 72 bp ATCGTCCTGGACTCGACGTCCATGTTGTTGTTCAAGTaGGACAAGACCATGGCGAGGTGCGGCCTCCAATCT +
Preference number: 6 (lower is better)
Translates to: IVLDSTSMLLFK*DKTMARCGLQS
Trigger: AGATTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACTTGAACAACAACATGGACGTCGAGTCCAGGACGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 90 bp GAATGTACTTTCAGGATCAGAGTTATTGGCCAGGTGGCTTCCACTTaGCAAGTGGCTCACCTCGTCTCTTCCGTCACTGGGCAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: ECTFRIRVIGQVAST*QVAHLVSSVTGQGC
Trigger: GCAGCCTTGCCCAGTGACGGAAGAGACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCTGGCCAATAACTCTGATCCTGAAAGTACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS TCA 72 bp GTGAGGAAGATATGGCAGAGTCTGAACTTCAGGCTCTaGACTGGGACCGACCTCTGCACTCCTGTTCATCTC +
Preference number: 6 (lower is better)
Translates to: VRKIWQSLNFRL*TGTDLCTPVHL
Trigger: GAGATGAACAGGAGTGCAGAGGTCGGTCCCAGTTCAGAGCCTGAAGTTCAGACTCTGCCATATCTTCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS TCA 72 bp GTCCGGCTGTCCATCTTACTTGCAAGTAGCAGAGCGTaGCCCCACAGGCCATTCTTCATTGCAGACTCCAAA +
Preference number: 6 (lower is better)
Translates to: VRLSILLASSRA*PHRPFFIADSK
Trigger: TTTGGAGTCTGCAATGAAGAATGGCCTGTGGGGTCACGCTCTGCTACTTGCAAGTAAGATGGACAGCCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS TCA 72 bp GGTGTCGTCTCTGCAGAAAGAACACACAGTGAGCAGTaGTGTCTGCAAGGCCGGGCTCACAAAGAAATGCCT +
Preference number: 6 (lower is better)
Translates to: GVVSAERTHSEQ*CLQGRAHKEMP
Trigger: AGGCATTTCTTTGTGAGCCCGGCCTTGCAGACATCACTGCTCACTGTGTGTTCTTTCTGCAGAGACGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472305.1
CDS GCA 72 bp ATGTTGTTGTTCAAGTTGGACAAGACCATGGCGAGGTaGGGCCTCCAATCTCCCCATTTCTCGTCTCCACAG +
Preference number: 6 (lower is better)
Translates to: MLLFKLDKTMAR*GLQSPHFSSPQ
Trigger: CTGTGGAGACGAGAAATGGGGAGATTGGAGGCCGCACCTCGCCATGGTCTTGTCCAACTTGAACAACAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CCA 72 bp AGGGTGGCCCCCATGAGACGTTTCAGGATCCACTCCTaGAATGTAGTGAGGAAGATATGGCAGAGTCTGAAC +
Preference number: 6 (lower is better)
Translates to: RVAPMRRFRIHS*NVVRKIWQSLN
Trigger: GTTCAGACTCTGCCATATCTTCCTCACTACATTCCAGGAGTGGATCCTGAAACGTCTCATGGGGGCCACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CCA 72 bp CGGGCAGACTTTCTGGATTTGACAGCTCCGAAAACATaGCTTTGGGTAGTTGTGGGGGAGAAGCCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: RADFLDLTAPKT*LWVVVGEKPVA
Trigger: AGCAACAGGCTTCTCCCCCACAACTACCCAAAGCCATGTTTTCGGAGCTGTCAAATCCAGAAAGTCTGCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp GCTTTGTTCTGTGCAAAATTAATGACATCCACCTTATaGGTGTCGTCTTTGGCCAGGGGTCCCGGGAACGCC +
Preference number: 6 (lower is better)
Translates to: ALFCAKLMTSTL*VSSLARGPGNA
Trigger: GGCGTTCCCGGGACCCCTGGCCAAAGACGACACCCATAAGGTGGATGTCATTAATTTTGCACAGAACAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 72 bp ATAAAAACGGTCAAGGTTAGGCGCCCCAGGCCCAGATaGTCTGGGATGACTGGCAACACTTTGCTGAGAAGC +
Preference number: 6 (lower is better)
Translates to: IKTVKVRRPRPR*SGMTGNTLLRS
Trigger: GCTTCTCAGCAAAGTGTTGCCAGTCATCCCAGACAATCTGGGCCTGGGGCGCCTAACCTTGACCGTTTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 72 bp CAGGATTCACCCTTCTTAGGTTCCTTCGTTTCTTTCTaGGCTGCCTGTCCGGGTCTCTTTGTTTCGGGAGCG +
Preference number: 6 (lower is better)
Translates to: QDSPFLGSFVSF*AACPGLFVSGA
Trigger: CGCTCCCGAAACAAAGAGACCCGGACAGGCAGCCAAGAAAGAAACGAAGGAACCTAAGAAGGGTGAATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 90 bp CGAAAGAACCAGGATTCACCCTTCTTAGGTTCCTTCGTTTCTTTCTaGGCTGCCTGTCCGGGTCTCTTTGTTTCGGGAGCGGGTGAGAGA +
Preference number: 6 (lower is better)
Translates to: RKNQDSPFLGSFVSF*AACPGLFVSGAGER
Trigger: TCTCTCACCCGCTCCCGAAACAAAGAGACCCGGACAGGCAGCCAAGAAAGAAACGAAGGAACCTAAGAAGGGTGAATCCTGGTTCTTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 90 bp ACCTGCTCCACTGCCTCATTCGTGAAATCAATCAGGTTTGCTTCATaGGGCGACTTCCCAGGAAGCCACACTGTTCTGTGGTCTCGTAAC +
Preference number: 6 (lower is better)
Translates to: TCSTASFVKSIRFAS*GDFPGSHTVLWSRN
Trigger: GTTACGAGACCACAGAACAGTGTGGCTTCCTGGGAAGTCGCCCAATGAAGCAAACCTGATTGATTTCACGAATGAGGCAGTGGAGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
ENST00000472305.1
CDS TCA 72 bp TCTTATGGGTGTCGTCTCTGCAGAAAGAACACACAGTaGGCAGTGATGTCTGCAAGGCCGGGCTCACAAAGA +
Preference number: 6 (lower is better)
Translates to: SYGCRLCRKNTQ*AVMSARPGSQR
Trigger: TCTTTGTGAGCCCGGCCTTGCAGACATCACTGCTCACTGTGTGTTCTTTCTGCAGAGACGACACCCATAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472305.1
CDS GCA 72 bp CTGCTCCACTGCCTCATTCGTGAAATCAATCAGGTTTaGTTCATTGGGCGACTTCCCAGGAAGCCACACTGT +
Preference number: 6 (lower is better)
Translates to: LLHCLIREINQV*FIGRLPRKPHC
Trigger: ACAGTGTGGCTTCCTGGGAAGTCGCCCAATGAAGCAAACCTGATTGATTTCACGAATGAGGCAGTGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
ENST00000472305.1
CDS CCA 72 bp GGACTGCTTTTGGACGAACTGCCCAGTGGTGTACTTTaGAGCGCCTGTCTACTAAAAGCAAATGGATCCGTG +
Preference number: 6 (lower is better)
Translates to: GLLLDELPSGVL*SACLLKANGSV
Trigger: CACGGATCCATTTGCTTTTAGTAGACAGGCGCTCCAAAGTACACCACTGGGCAGTTCGTCCAAAAGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS TCA 72 bp AGCCCAGGGCTGGAGCAGAAATCGTCAAAGTCCGCTTaGCCAGATAAGCCTGCTTTTTCAGATGAGAGATTC +
Preference number: 6 (lower is better)
Translates to: SPGLEQKSSKSA*PDKPAFSDERF
Trigger: GAATCTCTCATCTGAAAAAGCAGGCTTATCTGGTCAAGCGGACTTTGACGATTTCTGCTCCAGCCCTGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp TCTCTGCAGAAAGAACACACAGTGAGCAGTGATGTCTaGAAGGCCGGGCTCACAAAGAAATGCCTCAACAAG +
Preference number: 6 (lower is better)
Translates to: SLQKEHTVSSDV*KAGLTKKCLNK
Trigger: CTTGTTGAGGCATTTCTTTGTGAGCCCGGCCTTGCAGACATCACTGCTCACTGTGTGTTCTTTCTGCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472305.1
CDS CCA 72 bp CAAGACAGGTGGACTGCTTTTGGACGAACTGCCCAGTaGTGTACTTTGGAGCGCCTGTCTACTAAAAGCAAA +
Preference number: 6 (lower is better)
Translates to: QDRWTAFGRTAQ*CTLERLSTKSK
Trigger: TTTGCTTTTAGTAGACAGGCGCTCCAAAGTACACCACTGGGCAGTTCGTCCAAAAGCAGTCCACCTGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290037.10
ENST00000313050.11
CDS CAA 72 bp ACTGCCTCATTCGTGAAATCAATCAGGTTTGCTTCATaGGGCGACTTCCCAGGAAGCCACACTGTTCTGTGG +
Preference number: 6 (lower is better)
Translates to: TASFVKSIRFAS*GDFPGSHTVLW
Trigger: CCACAGAACAGTGTGGCTTCCTGGGAAGTCGCCCAATGAAGCAAACCTGATTGATTTCACGAATGAGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
ENST00000472305.1
CDS CCA 72 bp CTGAATGTACTTTCAGGATCAGAGTTATTGGCCAGGTaGCTTCCACTTTGCAAGTGGCTCACCTCGTCTCTT +
Preference number: 6 (lower is better)
Translates to: LNVLSGSELLAR*LPLCKWLTSSL
Trigger: AAGAGACGAGGTGAGCCACTTGCAAAGTGGAAGCCACCTGGCCAATAACTCTGATCCTGAAAGTACATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp GATCCCAGTGACCTGGATCTCCATAATCGTACTGGCTaGAGTAATAGCTTGCATAGTAATCGCTCTGACTGC +
Preference number: 6 (lower is better)
Translates to: DPSDLDLHNRTG*SNSLHSNRSDC
Trigger: GCAGTCAGAGCGATTACTATGCAAGCTATTACTCCAGCCAGTACGATTATGGAGATCCAGGTCACTGGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 72 bp GGATTTTGCCTGAATGTACTTTCAGGATCAGAGTTATaGGCCAGGTGGCTTCCACTTTGCAAGTGGCTCACC +
Preference number: 6 (lower is better)
Translates to: GFCLNVLSGSEL*ARWLPLCKWLT
Trigger: GGTGAGCCACTTGCAAAGTGGAAGCCACCTGGCCAATAACTCTGATCCTGAAAGTACATTCAGGCAAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 90 bp CCCAGTGACCTGGATCTCCATAATCGTACTGGCTGGAGTAATAGCTaGCATAGTAATCGCTCTGACTGCTCCATCCACTTTTGGAACTAT +
Preference number: 6 (lower is better)
Translates to: PSDLDLHNRTGWSNS*HSNRSDCSIHFWNY
Trigger: ATAGTTCCAAAAGTGGATGGAGCAGTCAGAGCGATTACTATGCAAGCTATTACTCCAGCCAGTACGATTATGGAGATCCAGGTCACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp AGCAGGGCTATTAGCAAATCCGGGAAGAGCACTTCCTaGCTTACGATCCTTTTGACTTTCTGGAACCAAGTT +
Preference number: 6 (lower is better)
Translates to: SRAISKSGKSTS*LTILLTFWNQV
Trigger: AACTTGGTTCCAGAAAGTCAAAAGGATCGTAAGGCAGGAAGTGCTCTTCCCGGATTTGCTAATAGCCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp GAGCAATCAAGACTGGAGGATTCTGCAGAGACTCAGTaGGCGGTGAGGATAATAAACTTGCATAACCAGAAC +
Preference number: 6 (lower is better)
Translates to: EQSRLEDSAETQ*AVRIINLHNQN
Trigger: GTTCTGGTTATGCAAGTTTATTATCCTCACCGCCCACTGAGTCTCTGCAGAATCCTCCAGTCTTGATTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 72 bp CATTTCGGAAGCACCAGAACCTTGTGGAAAATTACTTaGGGCAACACTGCTAGGCAGAGACAAGCTAAGGAC +
Preference number: 6 (lower is better)
Translates to: HFGSTRTLWKIT*GNTARQRQAKD
Trigger: GTCCTTAGCTTGTCTCTGCCTAGCAGTGTTGCCCAAAGTAATTTTCCACAAGGTTCTGGTGCTTCCGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 72 bp TGGAACCAAGTTCTCTGGAACTGGCTGGGATGGTGGTaGAACCAGCAAATTAGCAGGCTGATTAGAAACCAT +
Preference number: 6 (lower is better)
Translates to: WNQVLWNWLGWW*NQQISRLIRNH
Trigger: ATGGTTTCTAATCAGCCTGCTAATTTGCTGGTTCAACCACCATCCCAGCCAGTTCCAGAGAACTTGGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 90 bp ATTAGAAACCATTTCGGAAGCACCAGAACCTTGTGGAAAATTACTTaGGGCAACACTGCTAGGCAGAGACAAGCTAAGGACAGAGCTGGT +
Preference number: 6 (lower is better)
Translates to: IRNHFGSTRTLWKIT*GNTARQRQAKDRAG
Trigger: ACCAGCTCTGTCCTTAGCTTGTCTCTGCCTAGCAGTGTTGCCCAAAGTAATTTTCCACAAGGTTCTGGTGCTTCCGAAATGGTTTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 72 bp CTGGATCTCCATAATCGTACTGGCTGGAGTAATAGCTaGCATAGTAATCGCTCTGACTGCTCCATCCACTTT +
Preference number: 6 (lower is better)
Translates to: LDLHNRTGWSNS*HSNRSDCSIHF
Trigger: AAAGTGGATGGAGCAGTCAGAGCGATTACTATGCAAGCTATTACTCCAGCCAGTACGATTATGGAGATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CAA 72 bp ACTCATAGGCTTCCGTCCTCTGGATTGCTTCGTTGGTaGCGAACTTTAAGAATGGCAAACTGTGATTGGATC +
Preference number: 6 (lower is better)
Translates to: THRLPSSGLLRW*RTLRMANCDWI
Trigger: GATCCAATCACAGTTTGCCATTCTTAAAGTTCGCAACCAACGAAGCAATCCAGAGGACGGAAGCCTATGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277537.10
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
ENST00000453963.5
CDS CAA 90 bp CAAATTAGCAGGCTGATTAGAAACCATTTCGGAAGCACCAGAACCTaGTGGAAAATTACTTTGGGCAACACTGCTAGGCAGAGACAAGCT +
Preference number: 6 (lower is better)
Translates to: QISRLIRNHFGSTRT*WKITLGNTARQRQA
Trigger: AGCTTGTCTCTGCCTAGCAGTGTTGCCCAAAGTAATTTTCCACAAGGTTCTGGTGCTTCCGAAATGGTTTCTAATCAGCCTGCTAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp GGCTGGAGTAATAGCTTGCATAGTAATCGCTCTGACTaGTCCATCCACTTTTGGAACTATAGTATCCTTCAG +
Preference number: 6 (lower is better)
Translates to: GWSNSLHSNRSD*SIHFWNYSILQ
Trigger: CTGAAGGATACTATAGTTCCAAAAGTGGATGGAGCAGTCAGAGCGATTACTATGCAAGCTATTACTCCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS GCA 72 bp TGGATCTCCATAATCGTACTGGCTGGAGTAATAGCTTaGATAGTAATCGCTCTGACTGCTCCATCCACTTTT +
Preference number: 6 (lower is better)
Translates to: WISIIVLAGVIA*IVIALTAPSTF
Trigger: AAAAGTGGATGGAGCAGTCAGAGCGATTACTATGCAAGCTATTACTCCAGCCAGTACGATTATGGAGATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290037.10
ENST00000313050.11
ENST00000371706.7
ENST00000431893.3
CDS CCA 72 bp GTCACTTCAAGTGCAGATACAGACACCGCTTCTGGGTaGGATTTACAGTACTTTTACATAAGCTACAGAAGC +
Preference number: 6 (lower is better)
Translates to: VTSSADTDTASG*DLQYFYISYRS
Trigger: GCTTCTGTAGCTTATGTAAAAGTACTGTAAATCCCACCCAGAAGCGGTGTCTGTATCTGCACTTGAAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467838.2
CDS CCA 72 bp AGCTGTCACTTCAAGTGCAGATACAGACACCGCTTCTaGGTGGGATTTACAGTACTTTTACATAAGCTACAG +
Preference number: 6 (lower is better)
Translates to: SCHFKCRYRHRF*VGFTVLLHKLQ
Trigger: CTGTAGCTTATGTAAAAGTACTGTAAATCCCACCCAGAAGCGGTGTCTGTATCTGCACTTGAAGTGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467838.2
CDS GCA 72 bp TTACATAAGCTACAGAAGCAGATCCAAGACACTTCTTaGAACACTGGATTTAGTTATTTAATGGTTCAGAGA +
Preference number: 6 (lower is better)
Translates to: LHKLQKQIQDTS*NTGFSYLMVQR
Trigger: TCTCTGAACCATTAAATAACTAAATCCAGTGTTGCAAGAAGTGTCTTGGATCTGCTTCTGTAGCTTATGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467838.2