RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC14L5 (Homo sapiens)

Ensembl gene IDs: ENSG00000103184

Ensembl transcript IDs: ENST00000251170.12, ENST00000587469.1

Found 409 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCCTGGGGCTCCAGCCCACATGGTCCCAGGCCCTGCAGTTAGCTaGCTTCTCATTCTGGACATTTCTGGACACTGGAGGCGAGCGGGC +
Preference number: 1 (lower is better)
Translates to: RPGAPAHMVPGPAVS*LLILDISGHWRRAG
Trigger: GCCCGCTCGCCTCCAGTGTCCAGAAATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCCTGGGACCATGTGGGCTGGAGCCCCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 90 bp GGGTCCCCGAGACCTCCACATGGGAGGAGAGCCGGCCGTAGCAGATaGCACCATGGATACCTGCTGGTTCTGTGGTCCAGCTTCTCTTGT +
Preference number: 1 (lower is better)
Translates to: GSPRPPHGRRAGRSR*HHGYLLVLWSSFSC
Trigger: ACAAGAGAAGCTGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCCCATGTGGAGGTCTCGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp CAGCCCACATGGTCCCAGGCCCTGCAGTTAGCTGGCTTCTCATTCTaGACATTTCTGGACACTGGAGGCGAGCGGGCGGCCCTGAAACAC +
Preference number: 1 (lower is better)
Translates to: QPTWSQALQLAGFSF*TFLDTGGERAALKH
Trigger: GTGTTTCAGGGCCGCCCGCTCGCCTCCAGTGTCCAGAAATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCCTGGGACCATGTGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp TCCCCTGCATGGCGAAAGCAGAGCAAGAGGTGGACAGAGAGGAGATaGGCCTGGCTGACGTCGCTAAGCCCGGATGTCCCAAAGGTGTGG +
Preference number: 1 (lower is better)
Translates to: SPAWRKQSKRWTERR*AWLTSLSPDVPKVW
Trigger: CCACACCTTTGGGACATCCGGGCTTAGCGACGTCAGCCAGGCCCATCTCCTCTCTGTCCACCTCTTGCTCTGCTTTCGCCATGCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 90 bp CTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGCTGCGGCTTCTaGAGGGAATGTCAATCACGGGACCCTAGTTCCTTGCCAGTGTGG +
Preference number: 1 (lower is better)
Translates to: LVHWGNGPPQSCCGF*RECQSRDPSSLPVW
Trigger: CCACACTGGCAAGGAACTAGGGTCCCGTGATTGACATTCCCTGCAGAAGCCGCAGCAGGATTGGGGAGGGCCATTCCCCCAATGGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 90 bp GGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTaGTGCGGCTTCTGCAGGGAATGTCAATCACGGGACCCTAGTTCC +
Preference number: 1 (lower is better)
Translates to: GPASLVHWGNGPPQS*CGFCRECQSRDPSS
Trigger: GGAACTAGGGTCCCGTGATTGACATTCCCTGCAGAAGCCGCAGCAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 90 bp CACATGGGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTaGTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGC +
Preference number: 1 (lower is better)
Translates to: HMGGEPAVADATMDT*WFCGPASLVHWGNG
Trigger: GCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCCCATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp ATGGGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTaGTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCT +
Preference number: 1 (lower is better)
Translates to: MGGEPAVADATMDTC*FCGPASLVHWGNGP
Trigger: AGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 90 bp CCAGGCTGGCCAATCACTGCACCTCACTGCAACCCTGGATCACGGTaGTTGGTCCAGATTGGGCATGACCCTGCTGGCCAATCAGCATTC +
Preference number: 1 (lower is better)
Translates to: PGWPITAPHCNPGSR*LVQIGHDPAGQSAF
Trigger: GAATGCTGATTGGCCAGCAGGGTCATGCCCAATCTGGACCAATCACCGTGATCCAGGGTTGCAGTGAGGTGCAGTGATTGGCCAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 90 bp AATTTCAAGAGCCCTGACACCACCCACAGGCCAGTTCTGGATCCTTaGCATCCGCTCCAGACACCCCAACTTGGGCAGCATCTAGGCCTG +
Preference number: 1 (lower is better)
Translates to: NFKSPDTTHRPVLDP*HPLQTPQLGQHLGL
Trigger: CAGGCCTAGATGCTGCCCAAGTTGGGGTGTCTGGAGCGGATGGCAAGGATCCAGAACTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 90 bp CTCTGGGAAGTGGGCTGGAGCCTTTGGGAGGAAGAGGCTCTCTTATaGAGGCAAGCTGCAGGGAGGAGAAGGGCACCTGATAGTGATGGT +
Preference number: 1 (lower is better)
Translates to: LWEVGWSLWEEEALL*RQAAGRRRAPDSDG
Trigger: ACCATCACTATCAGGTGCCCTTCTCCTCCCTGCAGCTTGCCTGCATAAGAGAGCCTCTTCCTCCCAAAGGCTCCAGCCCACTTCCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 90 bp GGCATCTCCAGTGGGGTATACAGACAGCCTCAGTCACCCCATCACTaGCTGGAACTTAGCAGAAACCCAGGGCTCTCCCACCCTCTCCAA +
Preference number: 1 (lower is better)
Translates to: GISSGVYRQPQSPHH*LELSRNPGLSHPLQ
Trigger: TTGGAGAGGGTGGGAGAGCCCTGGGTTTCTGCTAAGTTCCAGGCAGTGATGGGGTGACTGAGGCTGTCTGTATACCCCACTGGAGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 90 bp CCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGCTaGGGCTTCTGCAGGGAATGTCAATCACGGGACCCTAGTTCCTTG +
Preference number: 1 (lower is better)
Translates to: PASLVHWGNGPPQSC*GFCRECQSRDPSSL
Trigger: CAAGGAACTAGGGTCCCGTGATTGACATTCCCTGCAGAAGCCGCAGCAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp GTCCTTGCAATTTCAAGAGCCCTGACACCACCCACAGGCCAGTTCTaGATCCTTGCCATCCGCTCCAGACACCCCAACTTGGGCAGCATC +
Preference number: 1 (lower is better)
Translates to: VLAISRALTPPTGQF*ILAIRSRHPNLGSI
Trigger: GATGCTGCCCAAGTTGGGGTGTCTGGAGCGGATGGCAAGGATCCAGAACTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp AATCGCTCCCCCTTCCAGGCTAAGACTCAGCTCTGGGAAGTGGGCTaGAGCCTTTGGGAGGAAGAGGCTCTCTTATGCAGGCAAGCTGCA +
Preference number: 1 (lower is better)
Translates to: NRSPFQAKTQLWEVG*SLWEEEALLCRQAA
Trigger: TGCAGCTTGCCTGCATAAGAGAGCCTCTTCCTCCCAAAGGCTCCAGCCCACTTCCCAGAGCTGAGTCTTAGCCTGGAAGGGGGAGCGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp ACCATGGATACCTGCTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTaGGGGAATGGCCCTCCCCAATCCTGCTGCGGCTTCTGCAGGGAA +
Preference number: 1 (lower is better)
Translates to: TMDTCWFCGPASLVH*GNGPPQSCCGFCRE
Trigger: TTCCCTGCAGAAGCCGCAGCAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCAGGTATCCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 90 bp CGAAGCCGGAAGGAGATGGTTCTGTCCTTGCAATTTCAAGAGCCCTaGCACCACCCACAGGCCAGTTCTGGATCCTTGCCATCCGCTCCA +
Preference number: 1 (lower is better)
Translates to: RSRKEMVLSLQFQEP*HHPQASSGSLPSAP
Trigger: TGGAGCGGATGGCAAGGATCCAGAACTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 90 bp ACCTCACTGCAACCCTGGATCACGGTGATTGGTCCAGATTGGGCATaGCCCTGCTGGCCAATCAGCATTCTCCAGTGTGCCTGGCAACTG +
Preference number: 1 (lower is better)
Translates to: TSLQPWITVIGPDWA*PCWPISILQCAWQL
Trigger: CAGTTGCCAGGCACACTGGAGAATGCTGATTGGCCAGCAGGGTCATGCCCAATCTGGACCAATCACCGTGATCCAGGGTTGCAGTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 90 bp TTGGGGCTGCTGGCAGCCATCTTTCCCGCCAGGTGGAAGAAAGAATaGGGTCAGCATGCAAAGAGATGCAGAGTCAAGAGGCCTGGGTGC +
Preference number: 1 (lower is better)
Translates to: LGLLAAIFPARWKKE*GQHAKRCRVKRPGC
Trigger: GCACCCAGGCCTCTTGACTCTGCATCTCTTTGCATGCTGACCTCATTCTTTCTTCCACCTGGCGGGAAAGATGGCTGCCAGCAGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 90 bp GGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATaGTGGCCAAGTGCAGGGAACATGGATTTTCACTTCAGGATGTGC +
Preference number: 1 (lower is better)
Translates to: GLSHPLQSGMVRLRP*WPSAGNMDFHFRMC
Trigger: GCACATCCTGAAGTGAAAATCCATGTTCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp AGATGGGCCTGGCTGACGTCGCTAAGCCCGGATGTCCCAAAGGTGTaGTATGGTAGACACCTTGGCCTTGGCTTGGTCTTCCTTACACGA +
Preference number: 1 (lower is better)
Translates to: RWAWLTSLSPDVPKV*YGRHLGLGLVFLTR
Trigger: TCGTGTAAGGAAGACCAAGCCAAGGCCAAGGTGTCTACCATACCACACCTTTGGGACATCCGGGCTTAGCGACGTCAGCCAGGCCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp TCTCCAGTGGGGTATACAGACAGCCTCAGTCACCCCATCACTGCCTaGAACTTAGCAGAAACCCAGGGCTCTCCCACCCTCTCCAATCAG +
Preference number: 1 (lower is better)
Translates to: SPVGYTDSLSHPITA*NLAETQGSPTLSNQ
Trigger: CTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTCTGCTAAGTTCCAGGCAGTGATGGGGTGACTGAGGCTGTCTGTATACCCCACTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp CAAGAGGCCTGGGTGCAGTTGAGAGGCCTGAGGACATTAAGCTCCTaGATCCAGCCATATCTGAAGCAGCACCCACCTTCAGCCATCCCT +
Preference number: 1 (lower is better)
Translates to: QEAWVQLRGLRTLSS*IQPYLKQHPPSAIP
Trigger: AGGGATGGCTGAAGGTGGGTGCTGCTTCAGATATGGCTGGATCCAGGAGCTTAATGTCCTCAGGCCTCTCAACTGCACCCAGGCCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp TACCTGCTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATaGCCCTCCCCAATCCTGCTGCGGCTTCTGCAGGGAATGTCAATC +
Preference number: 1 (lower is better)
Translates to: YLLVLWSSFSCPLGE*PSPILLRLLQGMSI
Trigger: GATTGACATTCCCTGCAGAAGCCGCAGCAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 90 bp TTGGGCTGGTTTTCCCTAGGGAGAGAGCACTCTCAAGAGCAGAACTaGAAGGGCCTGAGGTTCCTCACCCCCACTGTTAAGGGTGGACAG +
Preference number: 1 (lower is better)
Translates to: LGWFSLGREHSQEQN*KGLRFLTPTVKGGQ
Trigger: CTGTCCACCCTTAACAGTGGGGGTGAGGAACCTCAGGCCCTTTCAGTTCTGCTCTTGAGAGTGCTCTCTCCCTAGGGAAAACCAGCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 90 bp GGCAGCCATCTTTCCCGCCAGGTGGAAGAAAGAATGAGGTCAGCATaGAAAGAGATGCAGAGTCAAGAGGCCTGGGTGCAGTTGAGAGGC +
Preference number: 1 (lower is better)
Translates to: GSHLSRQVEERMRSA*KEMQSQEAWVQLRG
Trigger: GCCTCTCAACTGCACCCAGGCCTCTTGACTCTGCATCTCTTTGCATGCTGACCTCATTCTTTCTTCCACCTGGCGGGAAAGATGGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp CAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGAACATaGATTTTCACTTCAGGATGTGCTGTTCCCCACAAAGAGCAGCGC +
Preference number: 1 (lower is better)
Translates to: QGWSGLGHAGQVQGT*IFTSGCAVPHKEQR
Trigger: GCGCTGCTCTTTGTGGGGAACAGCACATCCTGAAGTGAAAATCCATGTTCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp AACTTAGCAGAAACCCAGGGCTCTCCCACCCTCTCCAATCAGGGATaGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGAACATGGATT +
Preference number: 1 (lower is better)
Translates to: NLAETQGSPTLSNQG*SGLGHAGQVQGTWI
Trigger: AATCCATGTTCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTCTGCTAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp ACCTTGGCCTTGGCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATaGTTCTGTCCTTGCAATTTCAAGAGCCCTGACACCACCCACAGG +
Preference number: 1 (lower is better)
Translates to: TLALAWSSLHEAGRR*FCPCNFKSPDTTHR
Trigger: CCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp CGGATGTCCCAAAGGTGTGGTATGGTAGACACCTTGGCCTTGGCTTaGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCCTTGC +
Preference number: 1 (lower is better)
Translates to: RMSQRCGMVDTLALA*SSLHEAGRRWFCPC
Trigger: GCAAGGACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGGTGTCTACCATACCACACCTTTGGGACATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp CAGTACTCCTCGAGGCACCCACTAGTGCTTTTGAGAGCAGGTGGTTaGTTCCAGAGATGTGCATGTGATCCAGGCTGGCCAATCACTGCA +
Preference number: 1 (lower is better)
Translates to: QYSSRHPLVLLRAGG*FQRCACDPGWPITA
Trigger: TGCAGTGATTGGCCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCACTAGTGGGTGCCTCGAGGAGTACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp CTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTaGCCAAGTGCAGGGAACATGGATTTTCACTTCAGGATGTGCTGT +
Preference number: 1 (lower is better)
Translates to: LSHPLQSGMVRLRPC*PSAGNMDFHFRMCC
Trigger: ACAGCACATCCTGAAGTGAAAATCCATGTTCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 90 bp ACTAGTGCTTTTGAGAGCAGGTGGTTGGTTCCAGAGATGTGCATGTaGTCCAGGCTGGCCAATCACTGCACCTCACTGCAACCCTGGATC +
Preference number: 1 (lower is better)
Translates to: TSAFESRWLVPEMCM*SRLANHCTSLQPWI
Trigger: GATCCAGGGTTGCAGTGAGGTGCAGTGATTGGCCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCACTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 90 bp AAGGAAGGCTGGGGTTTGAGTCCTGGCCTAAATTCAAGGCCCAGGTaGCCAAACACCAACAGTAATGCTGCTTGTGGGTTGCTTCTGTCC +
Preference number: 1 (lower is better)
Translates to: KEGWGLSPGLNSRPR*PNTNSNAACGLLLS
Trigger: GGACAGAAGCAACCCACAAGCAGCATTACTGTTGGTGTTTGGGCACCTGGGCCTTGAATTTAGGCCAGGACTCAAACCCCAGCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 90 bp GAAAGAATGAGGTCAGCATGCAAAGAGATGCAGAGTCAAGAGGCCTaGGTGCAGTTGAGAGGCCTGAGGACATTAAGCTCCTGGATCCAG +
Preference number: 1 (lower is better)
Translates to: ERMRSACKEMQSQEA*VQLRGLRTLSSWIQ
Trigger: CTGGATCCAGGAGCTTAATGTCCTCAGGCCTCTCAACTGCACCCAGGCCTCTTGACTCTGCATCTCTTTGCATGCTGACCTCATTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 90 bp CCATGCTGGCCAAGTGCAGGGAACATGGATTTTCACTTCAGGATGTaGTGTTCCCCACAAAGAGCAGCGCCTGTAACTCACTTAACTGCT +
Preference number: 1 (lower is better)
Translates to: PCWPSAGNMDFHFRM*CSPQRAAPVTHLTA
Trigger: AGCAGTTAAGTGAGTTACAGGCGCTGCTCTTTGTGGGGAACAGCACATCCTGAAGTGAAAATCCATGTTCCCTGCACTTGGCCAGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 90 bp ACCACTGACATTAATGGAGCGCTTTCTGTGTTCTGGGAGCTGTGCTaGAAGCTTTACAGCTACTCCCTCATTTCGTCCCACTACAACCTA +
Preference number: 1 (lower is better)
Translates to: TTDINGALSVFWELC*KLYSYSLISSHYNL
Trigger: TAGGTTGTAGTGGGACGAAATGAGGGAGTAGCTGTAAAGCTTTCAGCACAGCTCCCAGAACACAGAAAGCGCTCCATTAATGTCAGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 90 bp TTGAGAACGTCTCCTTCCAATCAGTCGGTCTCTTATGCACACATGTaGACACACACCTTGACGCAGAGTGCAAAGCAATCTATTTTGTTC +
Preference number: 1 (lower is better)
Translates to: LRTSPSNQSVSYAHM*THTLTQSAKQSILF
Trigger: GAACAAAATAGATTGCTTTGCACTCTGCGTCAAGGTGTGTGTGCACATGTGTGCATAAGAGACCGACTGATTGGAAGGAGACGTTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 90 bp CCATTCTGCTGGTGCTCCCAAATGCCTAAGGGAAGCCAGAAATCCTaGTTTCGATGCGAAATGCCTCAATTTTTAAACCATTCTAAAGGC +
Preference number: 1 (lower is better)
Translates to: PFCWCSQMPKGSQKS*FRCEMPQFLNHSKG
Trigger: GCCTTTAGAATGGTTTAAAAATTGAGGCATTTCGCATCGAAATCAGGATTTCTGGCTTCCCTTAGGCATTTGGGAGCACCAGCAGAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 90 bp AAGAGCAGCGCCTGTAACTCACTTAACTGCTCACCAAGCACATCTTaGTACTGCATAACAGAACGTTATGCAATCAGATGCCAAGGTAAA +
Preference number: 1 (lower is better)
Translates to: KSSACNSLNCSPSTS*YCITERYAIRCQGK
Trigger: TTTACCTTGGCATCTGATTGCATAACGTTCTGTTATGCAGTATCAAGATGTGCTTGGTGAGCAGTTAAGTGAGTTACAGGCGCTGCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp AGGATGTGTAATGTGGGCTGGGCGCAAGTCAATGGGGTAGGGACTGGCGTGGCCGACATTTCTGGACACTaGAGGCGAGCGGGCGGCCCT +
Preference number: 2 (lower is better)
Translates to: RMCNVGWAQVNGVGTGVADISGH*RRAGGP
Trigger: AGGGCCGCCCGCTCGCCTCCAGTGTCCAGAAATGTC...GGCCACGCCAGTCCCTACCCCATTGACTTGCGCCCAGCCCACATTACACATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCACTGGGCGCAAGTCAATaGGGTAGGGACTGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: GEPAVADATMDTCWFCGPLGASQ*GRDWRG
Trigger: GCCACGCCAGTCCCTACCCCATTGACTTGCGCCCAG...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp AGGATGTGTAATGTGGGCTGGGCGCAAGTCAATGGGGTAGGGACTGGCGTGGCCCCAGACACCCCAACTTaGGCAGCATCTAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: RMCNVGWAQVNGVGTGVAPDTPT*AASRPG
Trigger: CCCAGGCCTAGATGCTGCCCAAGTTGGGGTGTCTGG...GGCCACGCCAGTCCCTACCCCATTGACTTGCGCCCAGCCCACATTACACATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp CCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGCTCAGCTCTGGGAAGTaGGCTGGAGCCTTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: PTLSNQGWSGLGHAGQVQLSSGK*AGAFGR
Trigger: CCTCCCAAAGGCTCCAGCCCACTTCCCAGAGCTGAG...CTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR TCA 90 bp GGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCAGGCTTCAAGTTGGTaGCCCCTGACTGGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: GGEPAVADATMDTCWFCGQASSW*PLTGCL
Trigger: AAGGCAGCCAGTCAGGGGTCACCAACTTGAAGCCTG...ACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR GCA 90 bp AGACCTCCACATGGGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGGTCAGGCTTAGGCCATaGTGGCCAAGTGCAGGGAAC +
Preference number: 2 (lower is better)
Translates to: RPPHGRRAGRSRCHHGYLVRLRP*WPSAGN
Trigger: GTTCCCTGCACTTGGCCAGCATGGCCTAAGCCTGAC...CAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCCCATGTGGAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp GGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCAGAGTCAAGAGGCCTaGGTGCAGTTGAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: GGEPAVADATMDTCWFCGQSQEA*VQLRGL
Trigger: CAGGCCTCTCAACTGCACCCAGGCCTCTTGACTCTG...ACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 90 bp CACCATGGATACCTGCTGGTTCTGTGGTCCAGCTTCTCTTGTCCATaGGGGGAATGGCCCTCCCCAATCCTGCTGCGGCTTCTGCAGGGA +
Preference number: 2 (lower is better)
Translates to: HHGYLLVLWSSFSCP*GEWPSPILLRLLQG
Trigger: TCCCTGCAGAAGCCGCAGCAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCAGGTATCCATGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR TCA 90 bp AGACCTCCACATGGGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGGATTGGTTCAGGAATTaGCCTGGCAATCGCTCCCCC +
Preference number: 2 (lower is better)
Translates to: RPPHGRRAGRSRCHHGYLDWFRN*PGNRSP
Trigger: GGGGGAGCGATTGCCAGGTCAATTCCTGAACCAATC...CAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCCCATGTGGAGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp AGACCTCCACATGGGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCATTCTGGACATTTCTaGACACTGGAGGCGAGCGGG +
Preference number: 2 (lower is better)
Translates to: RPPHGRRAGRSRCHHGYLHSGHF*TLEASG
Trigger: CCCGCTCGCCTCCAGTGTCCAGAAATGTCCAGAATG...CAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCCCATGTGGAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGCCCACAGGCCAGTTCTaGATCCTTGCCATCCGCTCC +
Preference number: 2 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILPTGQF*ILAIRS
Trigger: GGAGCGGATGGCAAGGATCCAGAACTGGCCTGTGGG...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp GAAACCCAGGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATTGGACAGAGAGGAGATaGGCCTGGCTGACGTCGCTA +
Preference number: 2 (lower is better)
Translates to: ETQGSPTLSNQGWSGLGHWTERR*AWLTSL
Trigger: TAGCGACGTCAGCCAGGCCCATCTCCTCTCTGTCCA...ATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp AGGATGTGTAATGTGGGCTGGGCGCAAGTCAATGGGGTAGGGACTGGCGTGGCCCAAGCCCTCCTGGACTaGCCAGTTCTATGCACCCAT +
Preference number: 2 (lower is better)
Translates to: RMCNVGWAQVNGVGTGVAQALLD*PVLCTH
Trigger: ATGGGTGCATAGAACTGGCCAGTCCAGGAGGGCTTG...GGCCACGCCAGTCCCTACCCCATTGACTTGCGCCCAGCCCACATTACACATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 90 bp CAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCAGCTTCTCTaGTCCATTGGGGGAATGGCCCTCCCCAATCCTGCTGCGGCTTCT +
Preference number: 2 (lower is better)
Translates to: QMPPWIPAGSVVQLL*SIGGMALPNPAAAS
Trigger: AGAAGCCGCAGCAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR GCA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGCTTATGCAGGCAAGCTaGAGGGAGGAGAAGGGCACC +
Preference number: 2 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILLMQAS*REEKGT
Trigger: GGTGCCCTTCTCCTCCCTGCAGCTTGCCTGCATAAG...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp GGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCACCCCATCACTGCCTaGAACTTAGCAGAAACCCAG +
Preference number: 2 (lower is better)
Translates to: GGEPAVADATMDTCWFCGHPITA*NLAETQ
Trigger: CTGGGTTTCTGCTAAGTTCCAGGCAGTGATGGGGTG...ACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR GCA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCATTCCAGAGTCATATCTaGCCCAGGGCAAACACAGCA +
Preference number: 2 (lower is better)
Translates to: GEPAVADATMDTCWFCGPFQSHI*PRANTA
Trigger: TGCTGTGTTTGCCCTGGGGCAGATATGACTCTGGAA...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp AGACCTCCACATGGGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGGAAAGGCATCTCCAGTaGGGTATACAGACAGCCTCA +
Preference number: 2 (lower is better)
Translates to: RPPHGRRAGRSRCHHGYLERHLQ*GIQTAS
Trigger: TGAGGCTGTCTGTATACCCCACTGGAGATGCCTTTC...CAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCCCATGTGGAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR GCA 90 bp TGCTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAACAGCATGCAAAGAGATaGAGAGTCAAGAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: CWFCGPASLVHWGNGPPQQHAKR*RVKRPG
Trigger: CCCAGGCCTCTTGACTCTGCATCTCTTTGCATGCTG...TTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTTGTCCATTGGGGGAATaGCCCTCCCCAATCCTGCTG +
Preference number: 2 (lower is better)
Translates to: DARSPSQGTSSLCGSGEICPLGE*PSPILL
Trigger: CAGCAGGATTGGGGAGGGCCATTCCCCCAATGGACA...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 90 bp CCGGATGTCCCAAAGGTGTGGTATGGTAGACACCTTGGCCTTGGCTaGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: PDVPKVWYGRHLGLG*VFLTRSRKEMVLSL
Trigger: CAAGGACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGGTGTCTACCATACCACACCTTTGGGACATCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR TCA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACACCAGAGATGTGCATGTaGTCCAGGCTGGCCAATCAC +
Preference number: 2 (lower is better)
Translates to: GKKNDLDNASTWVPETSTPEMCM*SRLANH
Trigger: GTGATTGGCCAGCCTGGATCACATGCACATCTCTGG...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp GAAACCCAGGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATTTGAGAGCAGGTGGTTaGTTCCAGAGATGTGCATGT +
Preference number: 2 (lower is better)
Translates to: ETQGSPTLSNQGWSGLGHLRAGG*FQRCAC
Trigger: ACATGCACATCTCTGGAACCAACCACCTGCTCTCAA...ATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 90 bp AGGTCAGCATGCAAAGAGATGCAGAGTCAAGAGGCCTGGGTGCAGTaGAGAGGCCTGAGGACATTAAGCTCCTGGATCCAGCCATATCTG +
Preference number: 2 (lower is better)
Translates to: RSACKEMQSQEAWVQ*RGLRTLSSWIQPYL
Trigger: CAGATATGGCTGGATCCAGGAGCTTAATGTCCTCAGGCCTCTCAACTGCACCCAGGCCTCTTGACTCTGCATCTCTTTGCATGCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATGAGAGGAGATGGGCCTaGCTGACGTCGCTAAGCCCG +
Preference number: 2 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNERRWA*LTSLSP
Trigger: CGGGCTTAGCGACGTCAGCCAGGCCCATCTCCTCTC...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp GGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCAAGTGCAGGGAACATaGATTTTCACTTCAGGATGT +
Preference number: 2 (lower is better)
Translates to: GGEPAVADATMDTCWFCGQVQGT*IFTSGC
Trigger: ACATCCTGAAGTGAAAATCCATGTTCCCTGCACTTG...ACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR GCA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTATAGTGACCCCATTCTaGTGGTGCTCCCAAATGCCT +
Preference number: 2 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIIVTPF*WCSQMP
Trigger: AGGCATTTGGGAGCACCAGCAGAATGGGGTCACTAT...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR GCA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGGCTCTCAGCAATAAATaGCTGGTGATATGGGAGCAA +
Preference number: 2 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILALSNK*LVIWEQ
Trigger: TTGCTCCCATATCACCAGGCATTTATTGCTGAGAGC...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR GCA 90 bp TGCTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAAGGGAATTTGCTTTGTTaGTTAAGCCAGTTTGGGCTG +
Preference number: 2 (lower is better)
Translates to: CWFCGPASLVHWGNGPPQGNLLC*LSQFGL
Trigger: CAGCCCAAACTGGCTTAAGCAACAAAGCAAATTCCC...TTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR GCA 90 bp CTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAGTGGGCCCTCCCCAATCCTaGTGCGGCTTCTGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: LFSLDNKFYSREGEFQRVGPPQS*CGFCRE
Trigger: TTCCCTGCAGAAGCCGCAGCAGGATTGGGGAGGGCC...CACTCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 90 bp GGATTATTTTTAATTCCAGTCCTCCCGAAGGCAAGAAGAATGACCTaGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACATGGGAGG +
Preference number: 2 (lower is better)
Translates to: GLFLIPVLPKARRMT*IMLPRGSPRPPHGR
Trigger: CCTCCCATGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCCTTCGGGAGGACTGGAATTAAAAATAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp TTTGTGTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCACCTTGGCCTTGGCTTaGTCTTCCTTACACGAAGCC +
Preference number: 2 (lower is better)
Translates to: FVLKHLGMGLCGLQPKTVTLALA*SSLHEA
Trigger: GGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGGT...GACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAACACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp TTTGTGTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCACCTCACTGCAACCCTaGATCACGGTGATTGGTCCA +
Preference number: 2 (lower is better)
Translates to: FVLKHLGMGLCGLQPKTVTSLQP*ITVIGP
Trigger: TGGACCAATCACCGTGATCCAGGGTTGCAGTGAGGT...GACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAACACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATAGGCTTAGGCCATGCTaGCCAAGTGCAGGGAACATG +
Preference number: 2 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNRLRPC*PSAGNM
Trigger: CATGTTCCCTGCACTTGGCCAGCATGGCCTAAGCCT...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 90 bp CACATGTGCACACACACCTTGACGCAGAGTGCAAAGCAATCTATTTaGTTCAGATACCTGAGAAGCGGACAGAGAGCCAACAGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: HMCTHTLTQSAKQSI*FRYLRSGQRANRKV
Trigger: CACCTTCCTGTTGGCTCTCTGTCCGCTTCTCAGGTATCTGAACAAAATAGATTGCTTTGCACTCTGCGTCAAGGTGTGTGTGCACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR GCA 90 bp ATGGATTTTCACTTCAGGATGTGCTGTTCCCCACAAAGAGCAGCGCCTGTAACTATAGTGATGGTCCCCTaGATGGCGAAAGCAGAGCAA +
Preference number: 2 (lower is better)
Translates to: MDFHFRMCCSPQRAAPVTIVMVP*MAKAEQ
Trigger: TTGCTCTGCTTTCGCCATGCAGGGGACCATCACTAT...AGTTACAGGCGCTGCTCTTTGTGGGGAACAGCACATCCTGAAGTGAAAATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp TTTGTGTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCGGCCCTGCAGTTAGCTaGCTTCTCATTCTGGACATT +
Preference number: 2 (lower is better)
Translates to: FVLKHLGMGLCGLQPKTVGPAVS*LLILDI
Trigger: AATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCC...GACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAACACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 90 bp TGGACTGGCCAGTTCTATGCACCCATGAATGATCATGCTTTTGTGTaGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACA +
Preference number: 2 (lower is better)
Translates to: WTGQFYAPMNDHAFV*KHLGMGLCGLQPKT
Trigger: TGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAACACAAAAGCATGATCATTCATGGGTGCATAGAACTGGCCAGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR GCA 90 bp TTGCAAGTTGCTCTCAGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTTGCCAGTTCTGGATCCTTaGCATCCGCTCCAGACACCC +
Preference number: 2 (lower is better)
Translates to: LQVALSNKCLVIWEQLVLPVLDP*HPLQTP
Trigger: GGGTGTCTGGAGCGGATGGCAAGGATCCAGAACTGG...CAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCTGAGAGCAACTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR GCA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTCAGCATTCTCCAGTGTaGCTGGCAACTGTGATTGGT +
Preference number: 2 (lower is better)
Translates to: PGDMGAISFENVSFQSVGQHSPV*LATVIG
Trigger: ACCAATCACAGTTGCCAGGCACACTGGAGAATGCTG...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp TTTGTGTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCGAAGCCGGAAGGAGATaGTTCTGTCCTTGCAATTTC +
Preference number: 2 (lower is better)
Translates to: FVLKHLGMGLCGLQPKTVEAGRR*FCPCNF
Trigger: GAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTC...GACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAACACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR GCA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGATCCAAGCAATCCTTCTaGCTCAGCCTCCCGAGCAGC +
Preference number: 2 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRSKQSF*LSLPSS
Trigger: GCTGCTCGGGAGGCTGAGGCAGAAGGATTGCTTGGA...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR TCA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGACAATTTCAAGAGCCCTaGCACCACCCACAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRQFQEP*HHPQAS
Trigger: ACTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTG...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAGTGGGCTGGAGCCTTTaGGAGGAAGAGGCTCTCTTA +
Preference number: 2 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRVGWSL*EEEALL
Trigger: TAAGAGAGCCTCTTCCTCCCAAAGGCTCCAGCCCAC...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAGATAATGCTTCCACGTaGGTCCCCGAGACCTCCACA +
Preference number: 2 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRDNAST*VPETST
Trigger: TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATC...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 90 bp GTTGCTCTCAGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTaGAGAACGTCTCCTTCCAATCAGTCGGTCTCTTATGCACACATG +
Preference number: 2 (lower is better)
Translates to: VALSNKCLVIWEQLV*RTSPSNQSVSYAHM
Trigger: CATGTGTGCATAAGAGACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCTGAGAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR TCA 90 bp TTGCAAGTTGCTCTCAGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTTGATCATGCTTTTGTGTTaGAGCACCTGGGCATGGGTC +
Preference number: 2 (lower is better)
Translates to: LQVALSNKCLVIWEQLVLIMLLC*STWAWV
Trigger: GACCCATGCCCAGGTGCTTCAACACAAAAGCATGAT...CAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCTGAGAGCAACTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGACTCTCCAATCAGGGATaGTCAGGCTTAGGCCATGCT +
Preference number: 2 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRLSNQG*SGLGHA
Trigger: AGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAG...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR TCA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTCTATGCACCCATGAATaGTCATGCTTTTGTGTTGAA +
Preference number: 2 (lower is better)
Translates to: PGDMGAISFENVSFQSVGLCTHE*SCFCVE
Trigger: TTCAACACAAAAGCATGATCATTCATGGGTGCATAG...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CCA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAGATGTCCCAAAGGTGTaGTATGGTAGACACCTTGGC +
Preference number: 2 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRDVPKV*YGRHLG
Trigger: GCCAAGGTGTCTACCATACCACACCTTTGGGACATC...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR TCA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTGAAGAAGGATGTATCTaGAAAGATGACACTTTCTCT +
Preference number: 2 (lower is better)
Translates to: PGDMGAISFENVSFQSVGEEGCI*KDDTFS
Trigger: AGAGAAAGTGTCATCTTTTCAGATACATCCTTCTTC...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp CCTGCCACGCAGGTCATGAGGATGTGTAATGTGGGCTaGGCGCAAGTCAATGGGGTAGGGACTGGCGTGGCC +
Preference number: 3 (lower is better)
Translates to: PATQVMRMCNVG*AQVNGVGTGVA
Trigger: GGCCACGCCAGTCCCTACCCCATTGACTTGCGCCCAGCCCACATTACACATCCTCATGACCTGCGTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 72 bp AGCCCTGACACCACCCACAGGCCAGTTCTGGATCCTTaGCATCCGCTCCAGACACCCCAACTTGGGCAGCAT +
Preference number: 3 (lower is better)
Translates to: SPDTTHRPVLDP*HPLQTPQLGQH
Trigger: ATGCTGCCCAAGTTGGGGTGTCTGGAGCGGATGGCAAGGATCCAGAACTGGCCTGTGGGTGGTGTCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 72 bp AGACCTCCACATGGGAGGAGAGCCGGCCGTAGCAGATaGCACCATGGATACCTGCTGGTTCTGTGGTCCAGC +
Preference number: 3 (lower is better)
Translates to: RPPHGRRAGRSR*HHGYLLVLWSS
Trigger: GCTGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCCCATGTGGAGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp GTTAGCTGGCTTCTCATTCTGGACATTTCTGGACACTaGAGGCGAGCGGGCGGCCCTGAAACACTGGGCCCG +
Preference number: 3 (lower is better)
Translates to: VSWLLILDISGH*RRAGGPETLGP
Trigger: CGGGCCCAGTGTTTCAGGGCCGCCCGCTCGCCTCCAGTGTCCAGAAATGTCCAGAATGAGAAGCCAGCTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp TGGCGAAAGCAGAGCAAGAGGTGGACAGAGAGGAGATaGGCCTGGCTGACGTCGCTAAGCCCGGATGTCCCA +
Preference number: 3 (lower is better)
Translates to: WRKQSKRWTERR*AWLTSLSPDVP
Trigger: TGGGACATCCGGGCTTAGCGACGTCAGCCAGGCCCATCTCCTCTCTGTCCACCTCTTGCTCTGCTTTCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp GGCAATCGCTCCCCCTTCCAGGCTAAGACTCAGCTCTaGGAAGTGGGCTGGAGCCTTTGGGAGGAAGAGGCT +
Preference number: 3 (lower is better)
Translates to: GNRSPFQAKTQL*EVGWSLWEEEA
Trigger: AGCCTCTTCCTCCCAAAGGCTCCAGCCCACTTCCCAGAGCTGAGTCTTAGCCTGGAAGGGGGAGCGATTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp GAAACCCAGGGCTCTCCCACCCTCTCCAATCAGGGATaGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGA +
Preference number: 3 (lower is better)
Translates to: ETQGSPTLSNQG*SGLGHAGQVQG
Trigger: TCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 72 bp GTGGGCTGGAGCCTTTGGGAGGAAGAGGCTCTCTTATaGAGGCAAGCTGCAGGGAGGAGAAGGGCACCTGAT +
Preference number: 3 (lower is better)
Translates to: VGWSLWEEEALL*RQAAGRRRAPD
Trigger: ATCAGGTGCCCTTCTCCTCCCTGCAGCTTGCCTGCATAAGAGAGCCTCTTCCTCCCAAAGGCTCCAGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 72 bp GAGCACATTCAAAGCAGTCCGGGGCCGCGTGCAGCCTaGAGGCCACAGGCTGAACAAGCTAGCTCTAAAGTC +
Preference number: 3 (lower is better)
Translates to: EHIQSSPGPRAA*RPQAEQASSKV
Trigger: GACTTTAGAGCTAGCTTGTTCAGCCTGTGGCCTGCAGGCTGCACGCGGCCCCGGACTGCTTTGAATGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATaGCCCTCCCCAATCCTGCTGCGGCTTCTGCAGGGA +
Preference number: 3 (lower is better)
Translates to: VLWSSFSCPLGE*PSPILLRLLQG
Trigger: TCCCTGCAGAAGCCGCAGCAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp GAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTaGTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGG +
Preference number: 3 (lower is better)
Translates to: EPAVADATMDTC*FCGPASLVHWG
Trigger: CCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CAA 90 bp CCTTGGCCTTGGCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCGCCAGTTCTGGATCCTaGCCATCCGCTCCAGACACC +
Preference number: 3 (lower is better)
Translates to: PWPWLGLPYTKPEGDGSVASSGS*PSAPDT
Trigger: GGTGTCTGGAGCGGATGGCAAGGATCCAGAACTGGC...GACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 72 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTaGTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTGG +
Preference number: 3 (lower is better)
Translates to: GEPAVADATMDT*WFCGPASLVHW
Trigger: CCAATGGACAAGAGAAGCTGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CAA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGCTGACTGGCTGCCTTTaGGGGAGTCCAGGAAAGGAA +
Preference number: 3 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILLTGCL*GSPGKE
Trigger: TTCCTTTCCTGGACTCCCCAAAAGGCAGCCAGTCAG...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 72 bp CAACCCTGGATCACGGTGATTGGTCCAGATTGGGCATaGCCCTGCTGGCCAATCAGCATTCTCCAGTGTGCC +
Preference number: 3 (lower is better)
Translates to: QPWITVIGPDWA*PCWPISILQCA
Trigger: GGCACACTGGAGAATGCTGATTGGCCAGCAGGGTCATGCCCAATCTGGACCAATCACCGTGATCCAGGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 72 bp AGTGGGGTATACAGACAGCCTCAGTCACCCCATCACTaGCTGGAACTTAGCAGAAACCCAGGGCTCTCCCAC +
Preference number: 3 (lower is better)
Translates to: SGVYRQPQSPHH*LELSRNPGLSH
Trigger: GTGGGAGAGCCCTGGGTTTCTGCTAAGTTCCAGGCAGTGATGGGGTGACTGAGGCTGTCTGTATACCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp ATTTCAAGAGCCCTGACACCACCCACAGGCCAGTTCTaGATCCTTGCCATCCGCTCCAGACACCCCAACTTG +
Preference number: 3 (lower is better)
Translates to: ISRALTPPTGQF*ILAIRSRHPNL
Trigger: CAAGTTGGGGTGTCTGGAGCGGATGGCAAGGATCCAGAACTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp TGGCTGACGTCGCTAAGCCCGGATGTCCCAAAGGTGTaGTATGGTAGACACCTTGGCCTTGGCTTGGTCTTC +
Preference number: 3 (lower is better)
Translates to: WLTSLSPDVPKV*YGRHLGLGLVF
Trigger: GAAGACCAAGCCAAGGCCAAGGTGTCTACCATACCACACCTTTGGGACATCCGGGCTTAGCGACGTCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp GAAGGCAAGAAGAATGACCTTGATAATGCTTCCACGTaGGTCCCCGAGACCTCCACATGGGAGGAGAGCCGG +
Preference number: 3 (lower is better)
Translates to: EGKKNDLDNAST*VPETSTWEESR
Trigger: CCGGCTCTCCTCCCATGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CAA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTAGTGGGCTGGAGCCTTaGGGAGGAAGAGGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: DARSPSQGTSSLCGSGEISGLEP*GGRGSL
Trigger: AAGAGAGCCTCTTCCTCCCAAAGGCTCCAGCCCACT...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 72 bp AGAGCCATGTCAGTGAGACTCCTGCCACGCAGGTCATaGGGATGTGTAATGTGGGCTGGGCGCAAGTCAATG +
Preference number: 3 (lower is better)
Translates to: RAMSVRLLPRRS*GCVMWAGRKSM
Trigger: CATTGACTTGCGCCCAGCCCACATTACACATCCTCATGACCTGCGTGGCAGGAGTCTCACTGACATGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp TCGAGGCACCCACTAGTGCTTTTGAGAGCAGGTGGTTaGTTCCAGAGATGTGCATGTGATCCAGGCTGGCCA +
Preference number: 3 (lower is better)
Translates to: SRHPLVLLRAGG*FQRCACDPGWP
Trigger: TGGCCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCACTAGTGGGTGCCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 72 bp CACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATaGTGGCCAAGTGCAGGGAACATGGATTTTCACTTC +
Preference number: 3 (lower is better)
Translates to: HPLQSGMVRLRP*WPSAGNMDFHF
Trigger: GAAGTGAAAATCCATGTTCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp CCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTaGCCAAGTGCAGGGAACATGGATTTTCACTTCAGG +
Preference number: 3 (lower is better)
Translates to: PLQSGMVRLRPC*PSAGNMDFHFR
Trigger: CCTGAAGTGAAAATCCATGTTCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 72 bp AAGGAGATGGTTCTGTCCTTGCAATTTCAAGAGCCCTaGCACCACCCACAGGCCAGTTCTGGATCCTTGCCA +
Preference number: 3 (lower is better)
Translates to: KEMVLSLQFQEP*HHPQASSGSLP
Trigger: TGGCAAGGATCCAGAACTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 72 bp TTTGAGAGCAGGTGGTTGGTTCCAGAGATGTGCATGTaGTCCAGGCTGGCCAATCACTGCACCTCACTGCAA +
Preference number: 3 (lower is better)
Translates to: FESRWLVPEMCM*SRLANHCTSLQ
Trigger: TTGCAGTGAGGTGCAGTGATTGGCCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 72 bp CTGGCAGCCATCTTTCCCGCCAGGTGGAAGAAAGAATaGGGTCAGCATGCAAAGAGATGCAGAGTCAAGAGG +
Preference number: 3 (lower is better)
Translates to: LAAIFPARWKKE*GQHAKRCRVKR
Trigger: CCTCTTGACTCTGCATCTCTTTGCATGCTGACCTCATTCTTTCTTCCACCTGGCGGGAAAGATGGCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 72 bp TGGGGTTTGAGTCCTGGCCTAAATTCAAGGCCCAGGTaGCCAAACACCAACAGTAATGCTGCTTGTGGGTTG +
Preference number: 3 (lower is better)
Translates to: WGLSPGLNSRPR*PNTNSNAACGL
Trigger: CAACCCACAAGCAGCATTACTGTTGGTGTTTGGGCACCTGGGCCTTGAATTTAGGCCAGGACTCAAACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CAA 90 bp AGACCTCCACATGGGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGGAACTCATGTCAATATaGAACCTAGTTCCAGAGTCA +
Preference number: 3 (lower is better)
Translates to: RPPHGRRAGRSRCHHGYLELMSI*NLVPES
Trigger: TGACTCTGGAACTAGGTTCAATATTGACATGAGTTC...CAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCCCATGTGGAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CAA 90 bp CTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAGTGCGGGACCCTAGTTCCTaGCCAGTGTGGCCCACAGGA +
Preference number: 3 (lower is better)
Translates to: LFSLDNKFYSREGEFQRVRDPSS*PVWPTG
Trigger: TCCTGTGGGCCACACTGGCAAGGAACTAGGGTCCCG...CACTCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR GCA 72 bp CCAAGTGCAGGGAACATGGATTTTCACTTCAGGATGTaGTGTTCCCCACAAAGAGCAGCGCCTGTAACTCAC +
Preference number: 3 (lower is better)
Translates to: PSAGNMDFHFRM*CSPQRAAPVTH
Trigger: GTGAGTTACAGGCGCTGCTCTTTGTGGGGAACAGCACATCCTGAAGTGAAAATCCATGTTCCCTGCACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp TTGGCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATaGTTCTGTCCTTGCAATTTCAAGAGCCCTGACACC +
Preference number: 3 (lower is better)
Translates to: LAWSSLHEAGRR*FCPCNFKSPDT
Trigger: GGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp TCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGAACATaGATTTTCACTTCAGGATGTGCTGTTCCCCACAAA +
Preference number: 3 (lower is better)
Translates to: SGLGHAGQVQGT*IFTSGCAVPHK
Trigger: TTTGTGGGGAACAGCACATCCTGAAGTGAAAATCCATGTTCCCTGCACTTGGCCAGCATGGCCTAAGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CAA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTGGTATGGTAGACACCTaGGCCTTGGCTTGGTCTTCC +
Preference number: 3 (lower is better)
Translates to: PGDMGAISFENVSFQSVGGMVDT*ALAWSS
Trigger: GGAAGACCAAGCCAAGGCCAAGGTGTCTACCATACC...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CAA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACACTCACCAAGCACATCTaGATACTGCATAACAGAACG +
Preference number: 3 (lower is better)
Translates to: GKKNDLDNASTWVPETSTLTKHI*ILHNRT
Trigger: CGTTCTGTTATGCAGTATCAAGATGTGCTTGGTGAG...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp ATTAAACAGTTCCCTAGGAGAGAAAGGCATCTCCAGTaGGGTATACAGACAGCCTCAGTCACCCCATCACTG +
Preference number: 3 (lower is better)
Translates to: IKQFPRRERHLQ*GIQTASVTPSL
Trigger: CAGTGATGGGGTGACTGAGGCTGTCTGTATACCCCACTGGAGATGCCTTTCTCTCCTAGGGAACTGTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CAA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTCACCCACTAGTGCTTTaGAGAGCAGGTGGTTGGTTC +
Preference number: 3 (lower is better)
Translates to: PGDMGAISFENVSFQSVGHPLVL*RAGGWF
Trigger: GAACCAACCACCTGCTCTCAAAAGCACTAGTGGGTG...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CAA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTTGGGAGCAATTAGTTTaGAGAACGTCTCCTTCCAAT +
Preference number: 3 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIWEQLV*RTSPSN
Trigger: ATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCA...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 72 bp ATTAATGGAGCGCTTTCTGTGTTCTGGGAGCTGTGCTaGAAGCTTTACAGCTACTCCCTCATTTCGTCCCAC +
Preference number: 3 (lower is better)
Translates to: INGALSVFWELC*KLYSYSLISSH
Trigger: GTGGGACGAAATGAGGGAGTAGCTGTAAAGCTTTCAGCACAGCTCCCAGAACACAGAAAGCGCTCCATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp TGTTGTCTTCATGCAACAATAGTGACCCCATTCTGCTaGTGCTCCCAAATGCCTAAGGGAAGCCAGAAATCC +
Preference number: 3 (lower is better)
Translates to: CCLHATIVTPFC*CSQMPKGSQKS
Trigger: GGATTTCTGGCTTCCCTTAGGCATTTGGGAGCACCAGCAGAATGGGGTCACTATTGTTGCATGAAGACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp CCAAGGGAAATACCACTCAGAATACACTCCCTCAGATaGGTGGACTTACCCAGAAAACACAAGCAGCTTCTT +
Preference number: 3 (lower is better)
Translates to: PREIPLRIHSLR*VDLPRKHKQLL
Trigger: AAGAAGCTGCTTGTGTTTTCTGGGTAAGTCCACCCATCTGAGGGAGTGTATTCTGAGTGGTATTTCCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR-3UTR CAA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGACCTGAAATTATAGGCTaGGGGCTGCTGGCAGCCATC +
Preference number: 3 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRPEIIG*GLLAAI
Trigger: GATGGCTGCCAGCAGCCCCAAGCCTATAATTTCAGG...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CCA 72 bp GGGAAATACCACTCAGAATACACTCCCTCAGATGGGTaGACTTACCCAGAAAACACAAGCAGCTTCTTTCTT +
Preference number: 3 (lower is better)
Translates to: GKYHSEYTPSDG*TYPENTSSFFL
Trigger: AAGAAAGAAGCTGCTTGTGTTTTCTGGGTAAGTCCACCCATCTGAGGGAGTGTATTCTGAGTGGTATTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 72 bp TTTGAGATGGAAAAGCATCTCTTAGAGTGTGAATCCTaGAATTATAGGCTTGGGGCTGCTGGCAGCCATCTT +
Preference number: 3 (lower is better)
Translates to: FEMEKHLLECES*NYRLGAAGSHL
Trigger: AAGATGGCTGCCAGCAGCCCCAAGCCTATAATTTCAGGATTCACACTCTAAGAGATGCTTTTCCATCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 72 bp GCCTGTAACTCACTTAACTGCTCACCAAGCACATCTTaGTACTGCATAACAGAACGTTATGCAATCAGATGC +
Preference number: 3 (lower is better)
Translates to: ACNSLNCSPSTS*YCITERYAIRC
Trigger: GCATCTGATTGCATAACGTTCTGTTATGCAGTATCAAGATGTGCTTGGTGAGCAGTTAAGTGAGTTACAGGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR TCA 72 bp AAAGACTGCACACCCAACTCAGAGGGCAATAATTCTTaGCACCTACTTTTCTCTGGGTGCAATAACGAAAAA +
Preference number: 3 (lower is better)
Translates to: KDCTPNSEGNNS*HLLFSGCNNEK
Trigger: TTTTTCGTTATTGCACCCAGAGAAAAGTAGGTGTCAAGAATTATTGCCCTCTGAGTTGGGTGTGCAGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp CCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGTGTGCACAGAGCCTaGGGCGGGGCCCGATCGCGG +
Preference number: 4 (lower is better)
Translates to: PTLSNQGWSGLGHAGQVQGVHRA*GGARSR
Trigger: CCGCGATCGGGCCCCGCCTCAGGCTCTGTGCACACC...CTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCACAGCCCCGTCCGGGCTaGGGGACTCGCGCAAGACCT +
Preference number: 4 (lower is better)
Translates to: GLSHPLQSGMVRLRPCWPQPRPG*GTRARP
Trigger: AGGTCTTGCGCGAGTCCCGCAGCCCGGACGGGGCTG...TGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCACGATCAGCTGCCCGCTaGCCCTGGTCCCCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GEPAVADATMDTCWFCGPRSAAR*PWSPVP
Trigger: GGGAACCGGGGACCAGGGCCAGCGGGCAGCTGATCG...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCACCCGGCCGCCACAGGTaGCGCATGTTGAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GEPAVADATMDTCWFCGPPGRHR*RMLSPS
Trigger: GGAGGGACTCAACATGCGGCACCTGTGGCGGCCGGG...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGCAGTCCGGGGCCGCGTaGAGCCTGCAGGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILQSGAA*SLQATG
Trigger: GCCTGTGGCCTGCAGGCTGCACGCGGCCCCGGACTG...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGTCCACGGCCACCTCGTaGGGGGCTCCGCGGAGCACG +
Preference number: 4 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILSTATS*GAPRST
Trigger: CGTGCTCCGCGGAGCCCCCCACGAGGTGGCCGTGGA...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGCTCCGCTCCACCACGTaGACAGCCCCGTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILLRSTT*TAPSGL
Trigger: CAGCCCGGACGGGGCTGTGCACGTGGTGGAGCGGAG...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp AGACCTCCACATGGGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCCTTTGTCGATCAGCTaGCCGCTGGCCCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RPPHGRRAGRSRCHHGYLPLSIS*PLALVP
Trigger: GGGGACCAGGGCCAGCGGGCAGCTGATCGACAAAGG...CAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCCCATGTGGAGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCAGGGCCGCGTGCAGCCTaGAGGCCACAGGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: GEPAVADATMDTCWFCGPGPRAA*RPQAEQ
Trigger: TTGTTCAGCCTGTGGCCTGCAGGCTGCACGCGGCCC...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp AGACCTCCACATGGGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGGGCCCAGCTGCCTTGTaGTCCCCTCACACCGCTTCT +
Preference number: 4 (lower is better)
Translates to: RPPHGRRAGRSRCHHGYLGPAAL*SPHTAS
Trigger: AGAAGCGGTGTGAGGGGAGCACAAGGCAGCTGGGCC...CAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCCCATGTGGAGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTGCTGCCCAGGAAGACTaGGATCTGTGGGCACGTGGG +
Preference number: 4 (lower is better)
Translates to: GGEPAVADATMDTCWFCGAAQED*DLWARG
Trigger: CCCACGTGCCCACAGATCCCAGTCTTCCTGGGCAGC...ACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCACTCAGCTCTGGGAAGTaGGCTGGAGCCTTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLSHPLQSGMVRLRPCWPLSSGK*AGAFGR
Trigger: CCTCCCAAAGGCTCCAGCCCACTTCCCAGAGCTGAG...TGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp TGCTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATGGTGTGTCCCGCCTTaGACACCCTGCGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: CWFCGPASLVHWGNGPPQWCVPP*TPCGQD
Trigger: GTCCTGGCCGCAGGGTGTTCAAGGCGGGACACACCA...TTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACAGCGAGCGGGCGGCCCTaGAACACTGGGCCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: GKKNDLDNASTWVPETSTASGRP*NTGPGY
Trigger: ATAGCCGGGCCCAGTGTTTCAGGGCCGCCCGCTCGC...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAACAGAGCCATGTCAGTaGGACTCCTGCCACGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLSHPLQSGMVRLRPCWPTEPCQ*DSCHAG
Trigger: ACCTGCGTGGCAGGAGTCTCACTGACATGGCTCTGT...TGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCAGTCCAGCGCGGAATGTaGGAGGTACCCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: GEPAVADATMDTCWFCGPVQRGM*EVPWEM
Trigger: CATCTCCCAGGGTACCTCGCACATTCCGCGCTGGAC...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GAAACCCAGGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATATGGGACGGCCCAGCTaGCTTGTGCTCCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: ETQGSPTLSNQGWSGLGHMGRPS*LVLPSH
Trigger: GTGTGAGGGGAGCACAAGGCAGCTGGGCCGTCCCAT...ATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGAGATGGTTCTGTCCTTGCAATTTCAAGAGCCCTGACACCACCCACAGGCCAGATCCTCCTCACGGACTaGGGCAGGCGTCCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: GDGSVLAISRALTPPTGQILLTD*GRRPAR
Trigger: CCGCGCTGGACGCCTGCCCCAGTCCGTGAGGAGGAT...CTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp AGACCTCCACATGGGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTCCGCGGAGCACGCTaGCTGAATGGTAGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: RPPHGRRAGRSRCHHGYLLRGAR*LNGRSH
Trigger: GTGAGACCTACCATTCAGCCAGCGTGCTCCGCGGAG...CAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCCCATGTGGAGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp ACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGAGAGAGGAGATGGGCCTaGCTGACGTCGCTAAGCCCG +
Preference number: 4 (lower is better)
Translates to: TLSNQGWSGLGHAGQVQGERRWA*LTSLSP
Trigger: CGGGCTTAGCGACGTCAGCCAGGCCCATCTCCTCTC...TCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp CCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGTCTCGTAGGCCGCCATaGCCAGCTCAAACGGGTACT +
Preference number: 4 (lower is better)
Translates to: PTLSNQGWSGLGHAGQVQSRRPP*PAQTGT
Trigger: AGTACCCGTTTGAGCTGGTCATGGCGGCCTACGAGA...CTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCACTGCCACGCAGGTCATaGGGATGTGTAATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLSHPLQSGMVRLRPCWPLPRRS*GCVMWA
Trigger: AGCCCACATTACACATCCTCATGACCTGCGTGGCAG...TGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp CATGTGATCCAGGCTGGCCAATCACTGCACCTCACTGCAACCCTGGATCACGGTATCAGGCAGCTCTCCTaGATGGGCGTGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: HVIQAGQSLHLTATLDHGIRQLS*MGVRWP
Trigger: GGGCCACCTCACGCCCATGCAGGAGAGCTGCCTGAT...ACCGTGATCCAGGGTTGCAGTGAGGTGCAGTGATTGGCCAGCCTGGATCACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCACTTATGCAGGCAAGCTaGAGGGAGGAGAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: GEPAVADATMDTCWFCGPLMQAS*REEKGT
Trigger: GGTGCCCTTCTCCTCCCTGCAGCTTGCCTGCATAAG...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp CCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGAACCAGTGCCGAAGCTaGATCAGGCAGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PTLSNQGWSGLGHAGQVQNQCRS*IRQLSC
Trigger: GCAGGAGAGCTGCCTGATCCAGCTTCGGCACTGGTT...CTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTTGGACAGAGAGGAGATaGGCCTGGCTGACGTCGCTA +
Preference number: 4 (lower is better)
Translates to: GGEPAVADATMDTCWFCGWTERR*AWLTSL
Trigger: TAGCGACGTCAGCCAGGCCCATCTCCTCTCTGTCCA...ACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCACAAGCCCTCCTGGACTaGCCAGTTCTATGCACCCAT +
Preference number: 4 (lower is better)
Translates to: GLSHPLQSGMVRLRPCWPQALLD*PVLCTH
Trigger: ATGGGTGCATAGAACTGGCCAGTCCAGGAGGGCTTG...TGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp CATGTGATCCAGGCTGGCCAATCACTGCACCTCACTGCAACCCTGGATCACGGTCTGGGCGCAAGTCAATaGGGTAGGGACTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: HVIQAGQSLHLTATLDHGLGASQ*GRDWRG
Trigger: GCCACGCCAGTCCCTACCCCATTGACTTGCGCCCAG...ACCGTGATCCAGGGTTGCAGTGAGGTGCAGTGATTGGCCAGCCTGGATCACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp TGCTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCAGGTGGAAGTCATaGGCCCGCAGGAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: CWFCGPASLVHWGNGPPQSRWKS*ARRNRR
Trigger: CCTTCGGTTCCTGCGGGCTCATGACTTCCACCTGGA...TTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp AGGATGTGTAATGTGGGCTGGGCGCAAGTCAATGGGGTAGGGACTGGCGTGGCCTCTGTCCTTCCTCGTTaGCGGAGAGAACATGCCGCA +
Preference number: 4 (lower is better)
Translates to: RMCNVGWAQVNGVGTGVASVLPR*RREHAA
Trigger: TGCGGCATGTTCTCTCCGTCAACGAGGAAGGACAGA...GGCCACGCCAGTCCCTACCCCATTGACTTGCGCCCAGCCCACATTACACATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCAGGATCTAGCCTTACCTaGAGCAAGCCCTCCTGGACT +
Preference number: 4 (lower is better)
Translates to: GEPAVADATMDTCWFCGPGSSLT*SKPSWT
Trigger: AGTCCAGGAGGGCTTGCTTCAGGTAAGGCTAGATCC...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp CATGTGATCCAGGCTGGCCAATCACTGCACCTCACTGCAACCCTGGATCACGGTCGCGCAAGACCTCGCTaGCCAGGAAGACTGGGATCT +
Preference number: 4 (lower is better)
Translates to: HVIQAGQSLHLTATLDHGRARPR*PGRLGS
Trigger: AGATCCCAGTCTTCCTGGGCAGCGAGGTCTTGCGCG...ACCGTGATCCAGGGTTGCAGTGAGGTGCAGTGATTGGCCAGCCTGGATCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GAAACCCAGGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATCACAGCTGGTCCGTGTaGTCCTGCTCCTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ETQGSPTLSNQGWSGLGHHSWSV*SCSSSV
Trigger: GACAGAAGAGGAGCAGGAGCACACGGACCAGCTGTG...ATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTTTGGGCCCGGGGCTGTaGAGAGCCGTCAGGACATCG +
Preference number: 4 (lower is better)
Translates to: DARSPSQGTSSLCGSGEILGPGL*RAVRTS
Trigger: CGATGTCCTGACGGCTCTGCACAGCCCCGGGCCCAA...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp CATGTGATCCAGGCTGGCCAATCACTGCACCTCACTGCAACCCTGGATCACGGTGCCGGCCGTAGCAGATaGCACCATGGATACCTGCTG +
Preference number: 4 (lower is better)
Translates to: HVIQAGQSLHLTATLDHGAGRSR*HHGYLL
Trigger: CAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGC...ACCGTGATCCAGGGTTGCAGTGAGGTGCAGTGATTGGCCAGCCTGGATCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GAAACCCAGGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATTCCAAGCAATCCTTCTaGCTCAGCCTCCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ETQGSPTLSNQGWSGLGHSKQSF*LSLPSS
Trigger: GCTGCTCGGGAGGCTGAGGCAGAAGGATTGCTTGGA...ATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCAGCACCATGTTCACGCTaGAGCACCAATGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GEPAVADATMDTCWFCGPAPCSR*STNGGH
Trigger: GTGACCTCCATTGGTGCTCCAGCGTGAACATGGTGC...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCAGAAGACTGGGATCTGTaGGCACGTGGGGAAACGCTT +
Preference number: 4 (lower is better)
Translates to: GEPAVADATMDTCWFCGPEDWDL*ARGETL
Trigger: AAGCGTTTCCCCACGTGCCCACAGATCCCAGTCTTC...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACACGCCAGCTCAAGGACTaGCGCAGCATTTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GKKNDLDNASTWVPETSTRQLKD*RSISRA
Trigger: GGCCCGGGAAATGCTGCGCCAGTCCTTGAGCTGGCG...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp CCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGCCGACCCAGGGTCTCTaGGTAATTGTCCTCAACCAC +
Preference number: 4 (lower is better)
Translates to: PTLSNQGWSGLGHAGQVQPTQGL*VIVLNH
Trigger: GTGGTTGAGGACAATTACCCAGAGACCCTGGGTCGG...CTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GAAACCCAGGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATAGAGAAGTTTGCACTTaGGCCCGGGGCTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ETQGSPTLSNQGWSGLGHREVCT*ARGCAE
Trigger: CTCTGCACAGCCCCGGGCCCAAGTGCAAACTTCTCT...ATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTaGGGGAATGGCCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GEPAVADATMDTCWFCGPASLVH*GNGPPQ
Trigger: TTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGC...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GTCCCAGGCCCTGCAGTTAGCTGGCTTCTCATTCTGGACATTTCTGGACACTGGCCTCCTTCCCCCTCTTaGCGTTGGCGGTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: VPGPAVSWLLILDISGHWPPSPS*RWRCTA
Trigger: AGCAGTACACCGCCAACGTCAAGAGGGGGAAGGAGG...CCAGTGTCCAGAAATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCCTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GTGCTTTTGAGAGCAGGTGGTTGGTTCCAGAGATGTGCATGTGATCCAGGCTGGGGGGGTTGCCAGGTCTaGAGGAGGAGATCCACCTGG +
Preference number: 4 (lower is better)
Translates to: VLLRAGGWFQRCACDPGWGGCQV*RRRSTW
Trigger: CCAGGTGGATCTCCTCCTTCAGACCTGGCAACCCCC...CCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCAC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTTCTCAAGAGCAGAACTaGAAGGGCCTGAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GGEPAVADATMDTCWFCGSQEQN*KGLRFL
Trigger: GAGGAACCTCAGGCCCTTTCAGTTCTGCTCTTGAGA...ACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGTGCCCAGGCTGGTCTTaGACTCCTGCACTCAAGCGA +
Preference number: 4 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILCPGWS*TPALKR
Trigger: TCGCTTGAGTGCAGGAGTTCAAGACCAGCCTGGGCA...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GGAGATGGTTCTGTCCTTGCAATTTCAAGAGCCCTGACACCACCCACAGGCCAGAGCCTCCCGAGCAGCTaGGACTATAGGCACGCACCA +
Preference number: 4 (lower is better)
Translates to: GDGSVLAISRALTPPTGQSLPSS*DYRHAP
Trigger: TGGTGCGTGCCTATAGTCTCAGCTGCTCGGGAGGCT...CTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCCTTGCAATTTCCACCAGGCAGGGGTGTaGACAGAGCCTGAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: AWSSLHEAGRRWFCPCNFHQAGV*TEPEAG
Trigger: CCCCGCCTCAGGCTCTGTGCACACCCCTGCCTGGTG...GAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp ACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGAGCGAAGGTCTCATTGTaGGCTTCGATGAGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: TLSNQGWSGLGHAGQVQGAKVSL*ASMRSV
Trigger: GACGCTCCTCATCGAAGCGCACAATGAGACCTTCGC...TCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp AGGATGTGTAATGTGGGCTGGGCGCAAGTCAATGGGGTAGGGACTGGCGTGGCCACGTTGGCGGTGTACTaGTTCATGGCGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RMCNVGWAQVNGVGTGVATLAVY*FMAIFS
Trigger: GGAGAAGATCGCCATGAAGCAGTACACCGCCAACGT...GGCCACGCCAGTCCCTACCCCATTGACTTGCGCCCAGCCCACATTACACATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTTCGGTCCAGCCTGGTTaGGGGCATCCTCCTCACGGA +
Preference number: 4 (lower is better)
Translates to: DARSPSQGTSSLCGSGEISVQPG*GHPPHG
Trigger: TCCGTGAGGAGGATGCCCGCAACCAGGCTGGACCGA...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GAAACCCAGGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGTAATGCCAGCCCCCTaGATAGAACTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ETQGSPTLSNQGWSGLGHVMPAP*IELLQQ
Trigger: CTGCTGGAGGAGTTCTATGCAGGGGGCTGGCATTAC...ATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GGAGATGGTTCTGTCCTTGCAATTTCAAGAGCCCTGACACCACCCACAGGCCAGTTGACGGAGAGAACATaGCGCAGCAGCGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GDGSVLAISRALTPPTGQLTERT*RSSASS
Trigger: GGAGGAGGCGCTGCTGCGGCATGTTCTCTCCGTCAA...CTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp TGCTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAACCAGTTCTGGATCCTTaGCATCCGCTCCAGACACCC +
Preference number: 4 (lower is better)
Translates to: CWFCGPASLVHWGNGPPQPVLDP*HPLQTP
Trigger: GGGTGTCTGGAGCGGATGGCAAGGATCCAGAACTGG...TTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGGGATCTGTGGGCACGTaGGGAAACGCTTCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILGSVGT*GNASRR
Trigger: CCTACGAGAAGCGTTTCCCCACGTGCCCACAGATCC...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp TTTGTGTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCGGGCCTCCAGGGAGCTaGGGTCCCTCGGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FVLKHLGMGLCGLQPKTVGPPGS*GPSVQP
Trigger: AGGCTGGACCGAGGGACCCCAGCTCCCTGGAGGCCC...GACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAACACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGTGTCCATTGGGGGAATaGCCCTCCCCAATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILCPLGE*PSPILL
Trigger: CAGCAGGATTGGGGAGGGCCATTCCCCCAATGGACA...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGAGACCGAATGTCCAGTaGGGCAGACTGCTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILRPNVQ*GRLLEA
Trigger: TGCTTCGAGCAGTCTGCCTCACTGGACATTCGGTCT...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GTCCCAGGCCCTGCAGTTAGCTGGCTTCTCATTCTGGACATTTCTGGACACTGGCAGGCTTCAAGTTGGTaGCCCCTGACTGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VPGPAVSWLLILDISGHWQASSW*PLTGCL
Trigger: AAGGCAGCCAGTCAGGGGTCACCAACTTGAAGCCTG...CCAGTGTCCAGAAATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp CCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGCTGGCCCTGCATTGCTaGGCCTGCATAAAGATGATT +
Preference number: 4 (lower is better)
Translates to: PTLSNQGWSGLGHAGQVQLALHC*ACIKMI
Trigger: AATCATCTTTATGCAGGCTCAGCAATGCAGGGCCAG...CTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp CCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGTTCTGGGAGCTGTGCTaGAAGCTTTACAGCTACTCC +
Preference number: 4 (lower is better)
Translates to: PTLSNQGWSGLGHAGQVQFWELC*KLYSYS
Trigger: GGAGTAGCTGTAAAGCTTTCAGCACAGCTCCCAGAA...CTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GTCCCAGGCCCTGCAGTTAGCTGGCTTCTCATTCTGGACATTTCTGGACACTGGAGATCCACCTGGTGCTaGTTGCGCCAGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: VPGPAVSWLLILDISGHWRSTWC*LRQLKD
Trigger: GTCCTTGAGCTGGCGCAAGCAGCACCAGGTGGATCT...CCAGTGTCCAGAAATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCCTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCCTTGCAATTTCCATGGGAGCCCTGGATaGTCTCCCCCTCCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: AWSSLHEAGRRWFCPCNFHGSPG*SPPPGR
Trigger: TCTGCCGGGAGGGGGAGAGCATCCAGGGCTCCCATG...GAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTTGGAGACCAGGGAGCTaGTATGAGACTGGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIWRPGS*YETGRR
Trigger: CCTCCGGCCAGTCTCATAGCAGCTCCCTGGTCTCCA...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTGCTTTTGAGAGCAGGTGGTTGGTTCCAGAGATGTGCATGTGATCCAGGCTGGACGCTGGAGCACCAATaGAGGTCACCAGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: VLLRAGGWFQRCACDPGWTLEHQ*RSPGRG
Trigger: ACCCCTGCCTGGTGACCTCCATTGGTGCTCCAGCGT...CCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTGCTTTTGAGAGCAGGTGGTTGGTTCCAGAGATGTGCATGTGATCCAGGCTGGAGGAGGAGATCCACCTaGTGCTGCTTGCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VLLRAGGWFQRCACDPGWRRRST*CCLRQL
Trigger: GAGCTGGCGCAAGCAGCACCAGGTGGATCTCCTCCT...CCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTGCTTTTGAGAGCAGGTGGTTGGTTCCAGAGATGTGCATGTGATCCAGGCTGGCTGGGCCCGGCTATCTaGAGACCAGGGAGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: VLLRAGGWFQRCACDPGWLGPAI*RPGSCY
Trigger: ATAGCAGCTCCCTGGTCTCCAGATAGCCGGGCCCAG...CCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGCATTCTGGACATTTCTaGACACTGGAGGCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILHSGHF*TLEASG
Trigger: CCCGCTCGCCTCCAGTGTCCAGAAATGTCCAGAATG...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACACCAGACACCCCAACTTaGGCAGCATCTAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GKKNDLDNASTWVPETSTPDTPT*AASRPG
Trigger: CCCAGGCCTAGATGCTGCCCAAGTTGGGGTGTCTGG...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACACCCACAGGCCAGTTCTaGATCCTTGCCATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GKKNDLDNASTWVPETSTPTGQF*ILAIRS
Trigger: GGAGCGGATGGCAAGGATCCAGAACTGGCCTGTGGG...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GAAACCCAGGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATCACCCCATCACTGCCTaGAACTTAGCAGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: ETQGSPTLSNQGWSGLGHHPITA*NLAETQ
Trigger: CTGGGTTTCTGCTAAGTTCCAGGCAGTGATGGGGTG...ATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTATGTGTAATGTGGGCTaGGCGCAAGTCAATGGGGTA +
Preference number: 4 (lower is better)
Translates to: GGEPAVADATMDTCWFCGMCNVG*AQVNGV
Trigger: TACCCCATTGACTTGCGCCCAGCCCACATTACACAT...ACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGACAGGGGTGAGATCATaGCTCACTCCAGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILTGVRS*LTPALT
Trigger: GGTCAAGGCTGGAGTGAGCCATGATCTCACCCCTGT...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 72 bp GGGACTGGCGTGGCCACATCCAGGGGTGCAGAGGTGTaGTCTTCATGCAACAATAGTGACCCCATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GTGVATSRGAEV*SSCNNSDPILL
Trigger: CAGCAGAATGGGGTCACTATTGTTGCATGAAGACAACACCTCTGCACCCCTGGATGTGGCCACGCCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 72 bp CCATGGATACCTGCTGGTTCTGTGGTCCAGCTTCTCTaGTCCATTGGGGGAATGGCCCTCCCCAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: PWIPAGSVVQLL*SIGGMALPNPA
Trigger: AGCAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCAGGTATCCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp ACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGAAGGTACCCTGGGAGATaGGCTCATTCAGGTAATGCT +
Preference number: 4 (lower is better)
Translates to: TLSNQGWSGLGHAGQVQGRYPGR*AHSGNA
Trigger: AGCATTACCTGAATGAGCTCATCTCCCAGGGTACCT...TCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATTGTCCCCGTCCATACTaGCCGCCTCCAGAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNCPRPY*PPPERA
Trigger: GGCCCGCTCTGGAGGCGGTCAGTATGGACGGGGACA...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GTCCCAGGCCCTGCAGTTAGCTGGCTTCTCATTCTGGACATTTCTGGACACTGGCAATTTCAAGAGCCCTaGCACCACCCACAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VPGPAVSWLLILDISGHWQFQEP*HHPQAS
Trigger: ACTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTG...CCAGTGTCCAGAAATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCCTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GTGCTTTTGAGAGCAGGTGGTTGGTTCCAGAGATGTGCATGTGATCCAGGCTGGGGTACCAGCCACTGCTaGCAGAGCCATGTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: VLLRAGGWFQRCACDPGWGTSHC*QSHVSE
Trigger: CTCACTGACATGGCTCTGTCAGCAGTGGCTGGTACC...CCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp TGCTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAAGATGAAGTACAGGGGTaGGATCATGGCTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: CWFCGPASLVHWGNGPPQDEVQG*DHGSLQ
Trigger: CTGGAGTGAGCCATGATCTCACCCCTGTACTTCATC...TTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp TTTGTGTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCCCCAGCCTGGGCGCCTaGTTGGTGTGGTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: FVLKHLGMGLCGLQPKTVPSLGA*LVWYRL
Trigger: CAGCCTGTACCACACCAAGCAGGCGCCCAGGCTGGG...GACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAACACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp CCTTGGCCTTGGCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCGAAGAGGCTCTCTTATaGAGGCAAGCTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PWPWLGLPYTKPEGDGSVEEALL*RQAAGR
Trigger: CCTCCCTGCAGCTTGCCTGCATAAGAGAGCCTCTTC...GACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp AGGATGTGTAATGTGGGCTGGGCGCAAGTCAATGGGGTAGGGACTGGCGTGGCCATGCTGCTTGTGGGTTaGTTCTGTCCTGGTCACAAT +
Preference number: 4 (lower is better)
Translates to: RMCNVGWAQVNGVGTGVAMLLVG*FCPGHN
Trigger: ATTGTGACCAGGACAGAAGCAACCCACAAGCAGCAT...GGCCACGCCAGTCCCTACCCCATTGACTTGCGCCCAGCCCACATTACACATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp AGGATGTGTAATGTGGGCTGGGCGCAAGTCAATGGGGTAGGGACTGGCGTGGCCCTAAAAGAGAAAGACTaGACACCCAACTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: RMCNVGWAQVNGVGTGVALKEKD*TPNSEG
Trigger: GCCCTCTGAGTTGGGTGTGCAGTCTTTCTCTTTTAG...GGCCACGCCAGTCCCTACCCCATTGACTTGCGCCCAGCCCACATTACACATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTCCCAGGCCCTGCAGTTAGCTGGCTTCTCATTCTGGACATTTCTGGACACTGGAGGCTTAGGCCATGCTaGCCAAGTGCAGGGAACATG +
Preference number: 4 (lower is better)
Translates to: VPGPAVSWLLILDISGHWRLRPC*PSAGNM
Trigger: CATGTTCCCTGCACTTGGCCAGCATGGCCTAAGCCT...CCAGTGTCCAGAAATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCCTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp CCTTGGCCTTGGCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCGATAATGCTTCCACGTaGGTCCCCGAGACCTCCACA +
Preference number: 4 (lower is better)
Translates to: PWPWLGLPYTKPEGDGSVDNAST*VPETST
Trigger: TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATC...GACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 72 bp GGACCCCAGTACTCCTCGAGGCACCCACTAGTGCTTTaGAGAGCAGGTGGTTGGTTCCAGAGATGTGCATGT +
Preference number: 4 (lower is better)
Translates to: GPQYSSRHPLVL*RAGGWFQRCAC
Trigger: ACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCACTAGTGGGTGCCTCGAGGAGTACTGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp TGCTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATTACTGCAGCAGAGATaGGCCCCAACTCTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: CWFCGPASLVHWGNGPPQLLQQR*APTLSK
Trigger: CTTGCTTAGAGTTGGGGCTCATCTCTGCTGCAGTAA...TTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCAGAGGGCAATAATTCTTaGCACCTACTTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GEPAVADATMDTCWFCGPEGNNS*HLLFSG
Trigger: CCCAGAGAAAAGTAGGTGTCAAGAATTATTGCCCTC...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GGAGATGGTTCTGTCCTTGCAATTTCAAGAGCCCTGACACCACCCACAGGCCAGTGCACGAAGACCACGTaGTCAACACCTGCGATCTTC +
Preference number: 4 (lower is better)
Translates to: GDGSVLAISRALTPPTGQCTKTT*STPAIF
Trigger: GAAGATCGCAGGTGTTGAGCACGTGGTCTTCGTGCA...CTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GTCCCAGGCCCTGCAGTTAGCTGGCTTCTCATTCTGGACATTTCTGGACACTGGTCCAGTGAGGCAGACTaGTCGAAGCAAGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VPGPAVSWLLILDISGHWSSEAD*SKQVQS
Trigger: AGACTGGACTTGCTTCGAGCAGTCTGCCTCACTGGA...CCAGTGTCCAGAAATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCCTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp TTTGTGTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCCCACCTGGTGCTGCTTaGGCCAGCTCAAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: FVLKHLGMGLCGLQPKTVPPGAA*ASSRTG
Trigger: GCCAGTCCTTGAGCTGGCGCAAGCAGCACCAGGTGG...GACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAACACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp TGCTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAAGCCATGCTGGCCAAGTaGAGGGAACATGGATTTTCA +
Preference number: 4 (lower is better)
Translates to: CWFCGPASLVHWGNGPPQAMLAK*REHGFS
Trigger: TGAAAATCCATGTTCCCTGCACTTGGCCAGCATGGC...TTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTTCCTGCTGCGGCTTCTaGAGGGAATGTCAATCACGG +
Preference number: 4 (lower is better)
Translates to: DARSPSQGTSSLCGSGEISCCGF*RECQSR
Trigger: CCGTGATTGACATTCCCTGCAGAAGCCGCAGCAGGA...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GTGCTTTTGAGAGCAGGTGGTTGGTTCCAGAGATGTGCATGTGATCCAGGCTGGGCCACCATGGATACCTaGTGGTTCTGTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VLLRAGGWFQRCACDPGWATMDT*WFCGPA
Trigger: AGCTGGACCACAGAACCAGCAGGTATCCATGGTGGC...CCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp CCTTGGCCTTGGCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCATGTGCGAGGTACCCTaGGAGATGAGCTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: PWPWLGLPYTKPEGDGSVMCEVP*EMSSFR
Trigger: CCTGAATGAGCTCATCTCCCAGGGTACCTCGCACAT...GACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCCTTGCAATTTCGGCGCCTGCTTGGTGTaGTACAGGCTGAACACCACG +
Preference number: 4 (lower is better)
Translates to: AWSSLHEAGRRWFCPCNFGACLV*YRLNTT
Trigger: CGTGGTGTTCAGCCTGTACCACACCAAGCAGGCGCC...GAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTGTCACATGGGAGCCCTaGATGCTCTCCCCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PGDMGAISFENVSFQSVGVTWEP*MLSPSR
Trigger: CCGGGAGGGGGAGAGCATCCAGGGCTCCCATGTGAC...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATGGCCACCGGGTCACATaGGAGCCCTGGATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNGHRVT*EPWMLS
Trigger: GGAGAGCATCCAGGGCTCCCATGTGACCCGGTGGCC...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp CCTTGGCCTTGGCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCACCTTGGCCTTGGCTTaGTCTTCCTTACACGAAGCC +
Preference number: 4 (lower is better)
Translates to: PWPWLGLPYTKPEGDGSVTLALA*SSLHEA
Trigger: GGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGGT...GACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTGTGGGCTGGAGCCTTTaGGAGGAAGAGGCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIVGWSL*EEEALL
Trigger: TAAGAGAGCCTCTTCCTCCCAAAGGCTCCAGCCCAC...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCACAAGTGCAGGGAACATaGATTTTCACTTCAGGATGT +
Preference number: 4 (lower is better)
Translates to: GLSHPLQSGMVRLRPCWPQVQGT*IFTSGC
Trigger: ACATCCTGAAGTGAAAATCCATGTTCCCTGCACTTG...TGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp CATGTGATCCAGGCTGGCCAATCACTGCACCTCACTGCAACCCTGGATCACGGTGAAAGGCATCTCCAGTaGGGTATACAGACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: HVIQAGQSLHLTATLDHGERHLQ*GIQTAS
Trigger: TGAGGCTGTCTGTATACCCCACTGGAGATGCCTTTC...ACCGTGATCCAGGGTTGCAGTGAGGTGCAGTGATTGGCCAGCCTGGATCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp ATGGATTTTCACTTCAGGATGTGCTGTTCCCCACAAAGAGCAGCGCCTGTAACTGCGGAGCACGCTGGCTaGATGGTAGGTCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: MDFHFRMCCSPQRAAPVTAEHAG*MVGLTP
Trigger: TGGAGTGAGACCTACCATTCAGCCAGCGTGCTCCGC...AGTTACAGGCGCTGCTCTTTGTGGGGAACAGCACATCCTGAAGTGAAAATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTACCAGGGAGCTGCTATaGGACTGGCCGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGDMGAISFENVSFQSVGTRELL*DWPEEE
Trigger: CTCCTCCTCCGGCCAGTCTCATAGCAGCTCCCTGGT...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp ACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGAAGGTGGAAGAAAGAATaGGGTCAGCATGCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: TLSNQGWSGLGHAGQVQGRWKKE*GQHAKR
Trigger: TCTCTTTGCATGCTGACCTCATTCTTTCTTCCACCT...TCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTAATCAGAGCCTTCCATaGGATTTGAGATGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: GGEPAVADATMDTCWFCGNQSLP*DLRWKS
Trigger: GCTTTTCCATCTCAAATCTCATGGAAGGCTCTGATT...ACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp CCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGAGGGTTTTAGGAAGCTaGCGATGCAAGTTTATCCAA +
Preference number: 4 (lower is better)
Translates to: PTLSNQGWSGLGHAGQVQRVLGS*RCKFIQ
Trigger: TTGGATAAACTTGCATCGTCAGCTTCCTAAAACCCT...CTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCCTTGCAATTTCGGTGGACCGTGTAGCTaGAGTGCTCGTTCACCACCA +
Preference number: 4 (lower is better)
Translates to: AWSSLHEAGRRWFCPCNFGGPCS*SARSPP
Trigger: TGGTGGTGAACGAGCACTGCAGCTACACGGTCCACC...GAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp CCTTGGCCTTGGCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCGCTGGTGCTCCCAAATaGCTAAGGGAAGCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: PWPWLGLPYTKPEGDGSVAGAPK*LREARN
Trigger: ATTTCTGGCTTCCCTTAGGCATTTGGGAGCACCAGC...GACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GGAGATGGTTCTGTCCTTGCAATTTCAAGAGCCCTGACACCACCCACAGGCCAGATAGTGACCCCATTCTaGTGGTGCTCCCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: GDGSVLAISRALTPPTGQIVTPF*WCSQMP
Trigger: AGGCATTTGGGAGCACCAGCAGAATGGGGTCACTAT...CTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACACCTTGGCTCAGTTACTaGAGCAGAGATGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GKKNDLDNASTWVPETSTPWLSY*SRDEPQ
Trigger: TTGGGGCTCATCTCTGCTGCAGTAACTGAGCCAAGG...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACACAGCATGCAAAGAGATaGAGAGTCAAGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GKKNDLDNASTWVPETSTQHAKR*RVKRPG
Trigger: CCCAGGCCTCTTGACTCTGCATCTCTTTGCATGCTG...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTGGCCCTCCCCAATCCTaGTGCGGCTTCTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PGDMGAISFENVSFQSVGGPPQS*CGFCRE
Trigger: TTCCCTGCAGAAGCCGCAGCAGGATTGGGGAGGGCC...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCCTTGCAATTTCTCACCACCACGCGGTTaGCGAAGGTCTCATTGTGCG +
Preference number: 4 (lower is better)
Translates to: AWSSLHEAGRRWFCPCNFSPPRG*RRSHCA
Trigger: CGCACAATGAGACCTTCGCCAACCGCGTGGTGGTGA...GAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGAGATGGTTCTGTCCTTGCAATTTCAAGAGCCCTGACACCACCCACAGGCCAGCGGTGTACTGCTTCATaGCGATCTTCTCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: GDGSVLAISRALTPPTGQRCTAS*RSSPRH
Trigger: ATGCCTTGGAGAAGATCGCCATGAAGCAGTACACCG...CTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATTCCCTCGGTCCAGCCTaGTTGCGGGCATCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNSLGPA*LRASSS
Trigger: TGAGGAGGATGCCCGCAACCAGGCTGGACCGAGGGA...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATGACATTTCTGGACACTaGAGGCGAGCGGGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNDISGH*RRAGGP
Trigger: AGGGCCGCCCGCTCGCCTCCAGTGTCCAGAAATGTC...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTCCCAGGCCCTGCAGTTAGCTGGCTTCTCATTCTGGACATTTCTGGACACTGGGGCCCTGCAGTTAGCTaGCTTCTCATTCTGGACATT +
Preference number: 4 (lower is better)
Translates to: VPGPAVSWLLILDISGHWGPAVS*LLILDI
Trigger: AATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCC...CCAGTGTCCAGAAATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCCTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGAGATGGTTCTGTCCTTGCAATTTCAAGAGCCCTGACACCACCCACAGGCCAGGATGTCCCAAAGGTGTaGTATGGTAGACACCTTGGC +
Preference number: 4 (lower is better)
Translates to: GDGSVLAISRALTPPTGQDVPKV*YGRHLG
Trigger: GCCAAGGTGTCTACCATACCACACCTTTGGGACATC...CTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 72 bp CCAAAGGTGTGGTATGGTAGACACCTTGGCCTTGGCTaGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTT +
Preference number: 4 (lower is better)
Translates to: PKVWYGRHLGLG*VFLTRSRKEMV
Trigger: AACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGGTGTCTACCATACCACACCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 72 bp ATGTCCCAAAGGTGTGGTATGGTAGACACCTTGGCCTaGGCTTGGTCTTCCTTACACGAAGCCGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: MSQRCGMVDTLA*AWSSLHEAGRR
Trigger: TCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGGTGTCTACCATACCACACCTTTGGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp ACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGAGCCTTCCATGAGATTTaGGATGGAAAAGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: TLSNQGWSGLGHAGQVQGAFHEI*DGKASL
Trigger: AAGAGATGCTTTTCCATCTCAAATCTCATGGAAGGC...TCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GTGCTTTTGAGAGCAGGTGGTTGGTTCCAGAGATGTGCATGTGATCCAGGCTGGCAGCATTCTCCAGTGTaGCTGGCAACTGTGATTGGT +
Preference number: 4 (lower is better)
Translates to: VLLRAGGWFQRCACDPGWQHSPV*LATVIG
Trigger: ACCAATCACAGTTGCCAGGCACACTGGAGAATGCTG...CCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp ACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGAGAGGTGTTGTCTTCATaGAACAATAGTGACCCCATT +
Preference number: 4 (lower is better)
Translates to: TLSNQGWSGLGHAGQVQGEVLSS*NNSDPI
Trigger: AATGGGGTCACTATTGTTGCATGAAGACAACACCTC...TCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCCTTGCAATTTCGGCCACATCCAGGGGTaGAGAGGTGTTGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: AWSSLHEAGRRWFCPCNFGHIQG*RGVVFM
Trigger: CATGAAGACAACACCTCTGCACCCCTGGATGTGGCC...GAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp CATGTGATCCAGGCTGGCCAATCACTGCACCTCACTGCAACCCTGGATCACGGTGGGAATTTGCTTTGTTaGTTAAGCCAGTTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HVIQAGQSLHLTATLDHGGNLLC*LSQFGL
Trigger: CAGCCCAAACTGGCTTAAGCAACAAAGCAAATTCCC...ACCGTGATCCAGGGTTGCAGTGAGGTGCAGTGATTGGCCAGCCTGGATCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACAGGAATCTTGCCTTTGTaGGTCTCCTGTAACCAGTGC +
Preference number: 4 (lower is better)
Translates to: GKKNDLDNASTWVPETSTGILPL*VSCNQC
Trigger: GCACTGGTTACAGGAGACCCACAAAGGCAAGATTCC...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGAGATGGTTCTGTCCTTGCAATTTCAAGAGCCCTGACACCACCCACAGGCCAGTTGAGAGCAGGTGGTTaGTTCCAGAGATGTGCATGT +
Preference number: 4 (lower is better)
Translates to: GDGSVLAISRALTPPTGQLRAGG*FQRCAC
Trigger: ACATGCACATCTCTGGAACCAACCACCTGCTCTCAA...CTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTCACAAAACCACCCCTTaGCTCAGTTACTGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIHKTTP*LSYCSR
Trigger: TCTGCTGCAGTAACTGAGCCAAGGGGTGGTTTTGTG...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp ATGGATTTTCACTTCAGGATGTGCTGTTCCCCACAAAGAGCAGCGCCTGTAACTCAGAGTCAAGAGGCCTaGGTGCAGTTGAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: MDFHFRMCCSPQRAAPVTQSQEA*VQLRGL
Trigger: CAGGCCTCTCAACTGCACCCAGGCCTCTTGACTCTG...AGTTACAGGCGCTGCTCTTTGTGGGGAACAGCACATCCTGAAGTGAAAATCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTAGTTCCTTGCCAGTGTaGCCCACAGGAATAAGCATG +
Preference number: 4 (lower is better)
Translates to: DARSPSQGTSSLCGSGEISSLPV*PTGISM
Trigger: CATGCTTATTCCTGTGGGCCACACTGGCAAGGAACT...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp ACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGAGGGTTGCTTCTGTCCTaGTCACAATGGATTAATGAA +
Preference number: 4 (lower is better)
Translates to: TLSNQGWSGLGHAGQVQGGLLLS*SQWINE
Trigger: TTCATTAATCCATTGTGACCAGGACAGAAGCAACCC...TCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGAGATGGTTCTGTCCTTGCAATTTCAAGAGCCCTGACACCACCCACAGGCCAGACTCCCTCAGATGGGTaGACTTACCCAGAAAACACA +
Preference number: 4 (lower is better)
Translates to: GDGSVLAISRALTPPTGQTPSDG*TYPENT
Trigger: TGTGTTTTCTGGGTAAGTCCACCCATCTGAGGGAGT...CTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp CCTTGGCCTTGGCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCTTCAAGATGTTTGTCTaGACGAAGACCACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: PWPWLGLPYTKPEGDGSVFKMFV*TKTTCS
Trigger: TGAGCACGTGGTCTTCGTGCAGACAAACATCTTGAA...GACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATAGGAGATCCACCTGGTaGTGCTTGCGCCAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNRRSTW*CLRQLK
Trigger: CTTGAGCTGGCGCAAGCAGCACCAGGTGGATCTCCT...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACAACTCGGACAGGAGACTaGTATCTTTGCACCATGTTC +
Preference number: 4 (lower is better)
Translates to: GKKNDLDNASTWVPETSTTRTGD*YLCTMF
Trigger: GAACATGGTGCAAAGATACCAGTCTCCTGTCCGAGT...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTGGATGTGCTCATCTTTaGGAATCTTGCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIGCAHL*ESCLCG
Trigger: CCCACAAAGGCAAGATTCCCAAAGATGAGCACATCC...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTGAAGCCGGAAGGAGATaGTTCTGTCCTTGCAATTTC +
Preference number: 4 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIEAGRR*FCPCNF
Trigger: GAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTC...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTCCCAGGCCCTGCAGTTAGCTGGCTTCTCATTCTGGACATTTCTGGACACTGGAGGACATTAAGCTCCTaGATCCAGCCATATCTGAAG +
Preference number: 4 (lower is better)
Translates to: VPGPAVSWLLILDISGHWRTLSS*IQPYLK
Trigger: CTTCAGATATGGCTGGATCCAGGAGCTTAATGTCCT...CCAGTGTCCAGAAATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCCTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGCAAAAGCCAAAAGCTTaGCAATCCCTTCCTTGGATT +
Preference number: 4 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILQKPKA*QSLPWI
Trigger: AATCCAAGGAAGGGATTGCCAAGCTTTTGGCTTTTG...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 72 bp TTAATTCCAGTCCTCCCGAAGGCAAGAAGAATGACCTaGATAATGCTTCCACGTGGGTCCCCGAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: LIPVLPKARRMT*IMLPRGSPRPP
Trigger: TGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCCTTCGGGAGGACTGGAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTTGCTGCCACTGTAGATaGGGAACTTCCGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PGDMGAISFENVSFQSVGCCHCR*GTSAWC
Trigger: ACACCAGGCGGAAGTTCCTCATCTACAGTGGCAGCA...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp CTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAGTGTGGTGTGGTACAGGCTaGACACCACGTCCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: LFSLDNKFYSREGEFQRVWCGTG*TPRPLA
Trigger: TGCGAGGGGACGTGGTGTTCAGCCTGTACCACACCA...CACTCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATCCAGAGATGTGCATGTaGTCCAGGCTGGCCAATCAC +
Preference number: 4 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNPEMCM*SRLANH
Trigger: GTGATTGGCCAGCCTGGATCACATGCACATCTCTGG...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp ACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGAGAAGAAGGATGTATCTaGAAAGATGACACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TLSNQGWSGLGHAGQVQGEEGCI*KDDTFS
Trigger: AGAGAAAGTGTCATCTTTTCAGATACATCCTTCTTC...TCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATGGATCCAGCCATATCTaGAGCAGCACCCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNGSSHI*SSTHLQ
Trigger: CTGAAGGTGGGTGCTGCTTCAGATATGGCTGGATCC...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTCAGCTGGAAAGTTCTTaGACGAGCCCACGGGAAACC +
Preference number: 4 (lower is better)
Translates to: PGDMGAISFENVSFQSVGQLESS*TSPRET
Trigger: GGTTTCCCGTGGGCTCGTTCAAGAACTTTCCAGCTG...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACAGCTCTCAGCAATAAATaGCTGGTGATATGGGAGCAA +
Preference number: 4 (lower is better)
Translates to: GKKNDLDNASTWVPETSTALSNK*LVIWEQ
Trigger: TTGCTCCCATATCACCAGGCATTTATTGCTGAGAGC...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp TTGCAAGTTGCTCTCAGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTTGGCGGCCCTGAAACACTaGGCCCGGCTATCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LQVALSNKCLVIWEQLVLAALKH*ARLSGD
Trigger: GTCTCCAGATAGCCGGGCCCAGTGTTTCAGGGCCGC...CAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCTGAGAGCAACTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp TTTGTGTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCGTGACCCCATTCTGCTaGTGCTCCCAAATGCCTAAG +
Preference number: 4 (lower is better)
Translates to: FVLKHLGMGLCGLQPKTVVTPFC*CSQMPK
Trigger: CTTAGGCATTTGGGAGCACCAGCAGAATGGGGTCAC...GACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAACACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACAATACACTCCCTCAGATaGGTGGACTTACCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: GKKNDLDNASTWVPETSTIHSLR*VDLPRK
Trigger: TTTTCTGGGTAAGTCCACCCATCTGAGGGAGTGTAT...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp TTGCAAGTTGCTCTCAGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTTGTGCATGGGCGTGAGGTaGCCCAGGCACCTCTCAATG +
Preference number: 4 (lower is better)
Translates to: LQVALSNKCLVIWEQLVLCMGVR*PRHLSM
Trigger: CATTGAGAGGTGCCTGGGCCACCTCACGCCCATGCA...CAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCTGAGAGCAACTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATACCTCACTGCAACCCTaGATCACGGTGATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNTSLQP*ITVIGP
Trigger: TGGACCAATCACCGTGATCCAGGGTTGCAGTGAGGT...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACACTATGCACCCATGAATaGTCATGCTTTTGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: GKKNDLDNASTWVPETSTLCTHE*SCFCVE
Trigger: TTCAACACAAAAGCATGATCATTCATGGGTGCATAG...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTACAGGAATAAGCATGTaGCTCGAGCTGGGCCAATCA +
Preference number: 4 (lower is better)
Translates to: PGDMGAISFENVSFQSVGTGISM*LELGQS
Trigger: TGATTGGCCCAGCTCGAGTCACATGCTTATTCCTGT...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATGGAGACTGGTATCTTTaGACCATGTTCACGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNGDWYL*TMFTLE
Trigger: CTCCAGCGTGAACATGGTGCAAAGATACCAGTCTCC...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTATAGTGATGGTCCCCTaGATGGCGAAAGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: PGDMGAISFENVSFQSVGIVMVP*MAKAEQ
Trigger: TTGCTCTGCTTTCGCCATGCAGGGGACCATCACTAT...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp TTGCAAGTTGCTCTCAGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTTGGTCAGGCTTAGGCCATaGTGGCCAAGTGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LQVALSNKCLVIWEQLVLVRLRP*WPSAGN
Trigger: GTTCCCTGCACTTGGCCAGCATGGCCTAAGCCTGAC...CAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCTGAGAGCAACTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACACTACTTTTCTCTGGGTaGAATAACGAAAAACAGGGA +
Preference number: 4 (lower is better)
Translates to: GKKNDLDNASTWVPETSTLLFSG*NNEKQG
Trigger: TCCCTGTTTTTCGTTATTGCACCCAGAGAAAAGTAG...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp CCTTGGCCTTGGCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCAAATGCCTGGTGATATaGGAGCAATTAGTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PWPWLGLPYTKPEGDGSVKCLVI*EQLVLR
Trigger: TCTCAAAACTAATTGCTCCCATATCACCAGGCATTT...GACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGCCAAGGCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGACATTGTGCGCTTCGATaGGGAGCGTCCTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRHCALR*GASSPS
Trigger: GGAAGGAGAGGACGCTCCTCATCGAAGCGCACAATG...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp TTGCAAGTTGCTCTCAGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTTGGTCTCCTGTAACCAGTaGCGAAGCTGGATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQVALSNKCLVIWEQLVLVSCNQ*RSWIRQ
Trigger: CTGCCTGATCCAGCTTCGGCACTGGTTACAGGAGAC...CAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCTGAGAGCAACTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAGGGACCCTAGTTCCTTaGCAGTGTGGCCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRGTLVP*QCGPQE
Trigger: TTCCTGTGGGCCACACTGGCAAGGAACTAGGGTCCC...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GTGCTTTTGAGAGCAGGTGGTTGGTTCCAGAGATGTGCATGTGATCCAGGCTGGAAACGAGTCTTTGGATaGGAAGCATTAAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: VLLRAGGWFQRCACDPGWKRVFG*EALSNQ
Trigger: CTGATTACTTAATGCTTCGCATCCAAAGACTCGTTT...CCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGATCATGTAGAGGGACTTaGGGACCAGCCCTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRSCRGT*GPALLR
Trigger: CCGAAGGAGGGCTGGTCCCCAAGTCCCTCTACATGA...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp CTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAGTGCTCTCCAATCAGGGATaGTCAGGCTTAGGCCATGCT +
Preference number: 4 (lower is better)
Translates to: LFSLDNKFYSREGEFQRVLSNQG*SGLGHA
Trigger: AGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAG...CACTCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTCTGTCCTGGTCACAATaGATTAATGAACTAATGATG +
Preference number: 4 (lower is better)
Translates to: DARSPSQGTSSLCGSGEILSWSQ*INELMM
Trigger: CATCATTAGTTCATTAATCCATTGTGACCAGGACAG...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp ATGGATTTTCACTTCAGGATGTGCTGTTCCCCACAAAGAGCAGCGCCTGTAACTCCCATCGTGTTTCACTaGCTCAAAGAGACTTTGTTG +
Preference number: 4 (lower is better)
Translates to: MDFHFRMCCSPQRAAPVTPIVFH*LKETLL
Trigger: CAACAAAGTCTCTTTGAGCCAGTGAAACACGATGGG...AGTTACAGGCGCTGCTCTTTGTGGGGAACAGCACATCCTGAAGTGAAAATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 72 bp CAGTTCTATGCACCCATGAATGATCATGCTTTTGTGTaGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAA +
Preference number: 4 (lower is better)
Translates to: QFYAPMNDHAFV*KHLGMGLCGLQ
Trigger: TTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAACACAAAAGCATGATCATTCATGGGTGCATAGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 72 bp ACACACACCTTGACGCAGAGTGCAAAGCAATCTATTTaGTTCAGATACCTGAGAAGCGGACAGAGAGCCAAC +
Preference number: 4 (lower is better)
Translates to: THTLTQSAKQSI*FRYLRSGQRAN
Trigger: GTTGGCTCTCTGTCCGCTTCTCAGGTATCTGAACAAAATAGATTGCTTTGCACTCTGCGTCAAGGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp CTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAGTGATCATGCTTTTGTGTTaGAGCACCTGGGCATGGGTC +
Preference number: 4 (lower is better)
Translates to: LFSLDNKFYSREGEFQRVIMLLC*STWAWV
Trigger: GACCCATGCCCAGGTGCTTCAACACAAAAGCATGAT...CACTCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp CTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAGTGGCTTTTGAGAGCAGGTaGTTGGTTCCAGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: LFSLDNKFYSREGEFQRVAFESR*LVPEMC
Trigger: GCACATCTCTGGAACCAACCACCTGCTCTCAAAAGC...CACTCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 72 bp AGGTGCCCAAACACCAACAGTAATGCTGCTTGTGGGTaGCTTCTGTCCTGGTCACAATGGATTAATGAACTA +
Preference number: 4 (lower is better)
Translates to: RCPNTNSNAACG*LLSWSQWINEL
Trigger: TAGTTCATTAATCCATTGTGACCAGGACAGAAGCAACCCACAAGCAGCATTACTGTTGGTGTTTGGGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp TTGCAAGTTGCTCTCAGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTTGCTTTGTCACCCAGGATaGAGTACAGGGGTGAGATCA +
Preference number: 4 (lower is better)
Translates to: LQVALSNKCLVIWEQLVLLCHPG*STGVRS
Trigger: TGATCTCACCCCTGTACTTCATCCTGGGTGACAAAG...CAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCTGAGAGCAACTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp CTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAGTGGGGCATGGGTCTCTGTaGCTTACAACCAAAAACAGT +
Preference number: 4 (lower is better)
Translates to: LFSLDNKFYSREGEFQRVGHGSL*LTTKNS
Trigger: ACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCC...CACTCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp TTGCAAGTTGCTCTCAGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTTGACCATGGATACCTGCTaGTTCTGTGGTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LQVALSNKCLVIWEQLVLTMDTC*FCGPAS
Trigger: AGAAGCTGGACCACAGAACCAGCAGGTATCCATGGT...CAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCTGAGAGCAACTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGATTCCAGAGTCATATCTaGCCCAGGGCAAACACAGCA +
Preference number: 4 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRFQSHI*PRANTA
Trigger: TGCTGTGTTTGCCCTGGGGCAGATATGACTCTGGAA...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATCACCTTGACGCAGAGTaGAAAGCAATCTATTTTGTT +
Preference number: 4 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNHLDAE*KAIYFV
Trigger: AACAAAATAGATTGCTTTGCACTCTGCGTCAAGGTG...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR GCA 90 bp TTGCAAGTTGCTCTCAGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTTGAATTCAAGGCCCAGGTaGCCAAACACCAACAGTAAT +
Preference number: 4 (lower is better)
Translates to: LQVALSNKCLVIWEQLVLNSRPR*PNTNSN
Trigger: ATTACTGTTGGTGTTTGGGCACCTGGGCCTTGAATT...CAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCTGAGAGCAACTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
3UTR CAA 72 bp AGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTaGAGAACGTCTCCTTCCAATCAGTCGGTCTCTTAT +
Preference number: 4 (lower is better)
Translates to: SNKCLVIWEQLV*RTSPSNQSVSY
Trigger: ATAAGAGACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR TCA 90 bp TTGCAAGTTGCTCTCAGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTTGTTAGAGTGTGAATCCTaGAATTATAGGCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LQVALSNKCLVIWEQLVLLECES*NYRLGA
Trigger: AGCCCCAAGCCTATAATTTCAGGATTCACACTCTAA...CAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCTGAGAGCAACTTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CCA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATTGGCAATCCCTTCCTTaGATTATTTTTAATTCCAGT +
Preference number: 4 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNWQSLP*IIFNSS
Trigger: ACTGGAATTAAAAATAATCCAAGGAAGGGATTGCCA...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS TCA 90 bp GAGGCGGGGCCCGATCGCGGATCTCTAGCCTGGTGTGTCCCGCCTTaGACACCCTGCGGCCAGGACAGCTGTGGAAGGCCGGAGGGGCGG +
Preference number: 5 (lower is better)
Translates to: EAGPDRGSLAWCVPP*TPCGQDSCGRPEGR
Trigger: CCGCCCCTCCGGCCTTCCACAGCTGTCCTGGCCGCAGGGTGTTCAAGGCGGGACACACCAGGCTAGAGATCCGCGATCGGGCCCCGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS GCA 90 bp GCAGCCGGCAGCTCCGCTCCACCACGTGCACAGCCCCGTCCGGGCTaGGGGACTCGCGCAAGACCTCGCTGCCCAGGAAGACTGGGATCT +
Preference number: 5 (lower is better)
Translates to: AAGSSAPPRAQPRPG*GTRARPRCPGRLGS
Trigger: AGATCCCAGTCTTCCTGGGCAGCGAGGTCTTGCGCGAGTCCCGCAGCCCGGACGGGGCTGTGCACGTGGTGGAGCGGAGCTGCCGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS GCA 90 bp CCCCCTCCCGGCAGACAAGGGGAGCCTCCACACGGCTGTAATCCCTaGCCAGGACCCAGCCTTTGTCGATCAGCTGCCCGCTGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: PPPGRQGEPPHGCNP*PGPSLCRSAARWPW
Trigger: CCAGGGCCAGCGGGCAGCTGATCGACAAAGGCTGGGTCCTGGGCAGGGATTACAGCCGTGTGGAGGCTCCCCTTGTCTGCCGGGAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 90 bp GGGGTCCCTCGGTCCAGCCTGGTTGCGGGCATCCTCCTCACGGACTaGGGCAGGCGTCCAGCGCGGAATGTGCGAGGTACCCTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: GVPRSSLVAGILLTD*GRRPARNVRGTLGD
Trigger: ATCTCCCAGGGTACCTCGCACATTCCGCGCTGGACGCCTGCCCCAGTCCGTGAGGAGGATGCCCGCAACCAGGCTGGACCGAGGGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS GCA 90 bp CGTGCACAGCCCCGTCCGGGCTGCGGGACTCGCGCAAGACCTCGCTaGCCAGGAAGACTGGGATCTGTGGGCACGTGGGGAAACGCTTCT +
Preference number: 5 (lower is better)
Translates to: RAQPRPGCGTRARPR*PGRLGSVGTWGNAS
Trigger: AGAAGCGTTTCCCCACGTGCCCACAGATCCCAGTCTTCCTGGGCAGCGAGGTCTTGCGCGAGTCCCGCAGCCCGGACGGGGCTGTGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS CCA 90 bp CTGGTCCCCGGTTCCCGGGCGCCCAGCCTGGGCGCCTGCTTGGTGTaGTACAGGCTGAACACCACGTCCCCTCGCAGGATGTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: LVPGSRAPSLGACLV*YRLNTTSPRRMSKS
Trigger: GGACTTTGACATCCTGCGAGGGGACGTGGTGTTCAGCCTGTACCACACCAAGCAGGCGCCCAGGCTGGGCGCCCGGGAACCGGGGACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 90 bp CACTGGAGGCGAGCGGGCGGCCCTGAAACACTGGGCCCGGCTATCTaGAGACCAGGGAGCTGCTATGAGACTGGCCGGAGGAGGAGGACG +
Preference number: 5 (lower is better)
Translates to: HWRRAGGPETLGPAI*RPGSCYETGRRRRT
Trigger: CGTCCTCCTCCTCCGGCCAGTCTCATAGCAGCTCCCTGGTCTCCAGATAGCCGGGCCCAGTGTTTCAGGGCCGCCCGCTCGCCTCCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 90 bp GTCCGGGCTGCGGGACTCGCGCAAGACCTCGCTGCCCAGGAAGACTaGGATCTGTGGGCACGTGGGGAAACGCTTCTCGTAGGCCGCCAT +
Preference number: 5 (lower is better)
Translates to: VRAAGLAQDLAAQED*DLWARGETLLVGRH
Trigger: ATGGCGGCCTACGAGAAGCGTTTCCCCACGTGCCCACAGATCCCAGTCTTCCTGGGCAGCGAGGTCTTGCGCGAGTCCCGCAGCCCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS CCA 90 bp GCGGGACTCGCGCAAGACCTCGCTGCCCAGGAAGACTGGGATCTGTaGGCACGTGGGGAAACGCTTCTCGTAGGCCGCCATGACCAGCTC +
Preference number: 5 (lower is better)
Translates to: AGLAQDLAAQEDWDL*ARGETLLVGRHDQL
Trigger: GAGCTGGTCATGGCGGCCTACGAGAAGCGTTTCCCCACGTGCCCACAGATCCCAGTCTTCCTGGGCAGCGAGGTCTTGCGCGAGTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS GCA 90 bp CAGGGGGTTGCCAGGTCTGAAGGAGGAGATCCACCTGGTGCTGCTTaGGCCAGCTCAAGGACTGGCGCAGCATTTCCCGGGCCTTGTCCA +
Preference number: 5 (lower is better)
Translates to: QGVARSEGGDPPGAA*ASSRTGAAFPGPCP
Trigger: TGGACAAGGCCCGGGAAATGCTGCGCCAGTCCTTGAGCTGGCGCAAGCAGCACCAGGTGGATCTCCTCCTTCAGACCTGGCAACCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 90 bp TGGACATTTCTGGACACTGGAGGCGAGCGGGCGGCCCTGAAACACTaGGCCCGGCTATCTGGAGACCAGGGAGCTGCTATGAGACTGGCC +
Preference number: 5 (lower is better)
Translates to: WTFLDTGGERAALKH*ARLSGDQGAAMRLA
Trigger: GGCCAGTCTCATAGCAGCTCCCTGGTCTCCAGATAGCCGGGCCCAGTGTTTCAGGGCCGCCCGCTCGCCTCCAGTGTCCAGAAATGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 90 bp GGCCCTGCAGTTAGCTGGCTTCTCATTCTGGACATTTCTGGACACTaGAGGCGAGCGGGCGGCCCTGAAACACTGGGCCCGGCTATCTGG +
Preference number: 5 (lower is better)
Translates to: GPAVSWLLILDISGH*RRAGGPETLGPAIW
Trigger: CCAGATAGCCGGGCCCAGTGTTTCAGGGCCGCCCGCTCGCCTCCAGTGTCCAGAAATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCACGGGACCCTAGTTCCTaGCCAGTGTGGCCCACAGGA +
Preference number: 5 (lower is better)
Translates to: GEPAVADATMDTCWFCGPRDPSS*PVWPTG
Trigger: TCCTGTGGGCCACACTGGCAAGGAACTAGGGTCCCG...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 90 bp AGTCCTCAGAGGCGAGCACCTCACAGTAGTAGAGAAGTTTGCACTTaGGCCCGGGGCTGTGCAGAGCCGTCAGGACATCGTCCACACCCG +
Preference number: 5 (lower is better)
Translates to: SPQRRAPHSSREVCT*ARGCAEPSGHRPHP
Trigger: CGGGTGTGGACGATGTCCTGACGGCTCTGCACAGCCCCGGGCCCAAGTGCAAACTTCTCTACTACTGTGAGGTGCTCGCCTCTGAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 90 bp GCTGGTCCGTGTGCTCCTGCTCCTCTTCTGTCATGTAGAGGGACTTaGGGACCAGCCCTCCTTCGGGGACATTACACACACTCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: AGPCAPAPLLSCRGT*GPALLRGHYTHSLP
Trigger: GGGGAGAGAGTGTGTGTAATGTCCCCGAAGGAGGGCTGGTCCCCAAGTCCCTCTACATGACAGAAGAGGAGCAGGAGCACACGGACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GGCAAGAAGAATGACCTTGATAATGCTTCCACGTGGGTCCCCGAGACCTCCACACTCGGTCCAGCCTGGTaGCGGGCATCCTCCTCACGG +
Preference number: 5 (lower is better)
Translates to: GKKNDLDNASTWVPETSTLGPAW*RASSSR
Trigger: CCGTGAGGAGGATGCCCGCAACCAGGCTGGACCGAG...TGTGGAGGTCTCGGGGACCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTGACGGCCCAGCTGCCTaGTGCTCCCCTCACACCGCT +
Preference number: 5 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIDGPAA*CSPHTA
Trigger: AGCGGTGTGAGGGGAGCACAAGGCAGCTGGGCCGTC...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp AGGATGTGTAATGTGGGCTGGGCGCAAGTCAATGGGGTAGGGACTGGCGTGGCCTTGGCGAAGGTCTCATaGTGCGCTTCGATGAGGAGC +
Preference number: 5 (lower is better)
Translates to: RMCNVGWAQVNGVGTGVALAKVS*CASMRS
Trigger: GCTCCTCATCGAAGCGCACAATGAGACCTTCGCCAA...GGCCACGCCAGTCCCTACCCCATTGACTTGCGCCCAGCCCACATTACACATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GAAACCCAGGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATTTCACCACCACGCGGTaGGCGAAGGTCTCATTGTGC +
Preference number: 5 (lower is better)
Translates to: ETQGSPTLSNQGWSGLGHFTTTR*AKVSLC
Trigger: GCACAATGAGACCTTCGCCAACCGCGTGGTGGTGAA...ATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGACCTCCTTCCCCCTCTaGACGTTGGCGGTGTACTGC +
Preference number: 5 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILTSFPL*TLAVYC
Trigger: GCAGTACACCGCCAACGTCAAGAGGGGGAAGGAGGT...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGCACAGGTGCCGCATGTaGAGTCCCTCCAGGTCTAGC +
Preference number: 5 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILHRCRM*SPSRSS
Trigger: GCTAGACCTGGAGGGACTCAACATGCGGCACCTGTG...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp ACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGATTCTGTCCTTCCTCGTaGACGGAGAGAACATGCCGC +
Preference number: 5 (lower is better)
Translates to: TLSNQGWSGLGHAGQVQGFCPSS*TERTCR
Trigger: GCGGCATGTTCTCTCCGTCAACGAGGAAGGACAGAA...TCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp CCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGTAGACACCTTGGCCTaGGCTTGGTCTTCCTTACAC +
Preference number: 5 (lower is better)
Translates to: PTLSNQGWSGLGHAGQVQVDTLA*AWSSLH
Trigger: GTGTAAGGAAGACCAAGCCAAGGCCAAGGTGTCTAC...CTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GAAACCCAGGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGGTATGGTAGACACCTaGGCCTTGGCTTGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: ETQGSPTLSNQGWSGLGHGMVDT*ALAWSS
Trigger: GGAAGACCAAGCCAAGGCCAAGGTGTCTACCATACC...ATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp TGCTGGTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAAAGTGGGCTGGAGCCTTaGGGAGGAAGAGGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: CWFCGPASLVHWGNGPPQSGLEP*GGRGSL
Trigger: AAGAGAGCCTCTTCCTCCCAAAGGCTCCAGCCCACT...TTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAACCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GTTCTGTGGTCCAGCTTCTCTTGTCCATTGGGGGAATGGCCCTCCCCAATCCTGGTGGTCCAGCTTCTCTaGTCCATTGGGGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: VLWSSFSCPLGEWPSPILVVQLL*SIGGMA
Trigger: GGCCATTCCCCCAATGGACAAGAGAAGCTGGACCAC...CAGGATTGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCTGGACCACAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCCTTGCAATTTCCTGGTGTGTCCCGCCTaGAACACCCTGCGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: AWSSLHEAGRRWFCPCNFLVCPA*NTLRPG
Trigger: TCCTGGCCGCAGGGTGTTCAAGGCGGGACACACCAG...GAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp AGGATGTGTAATGTGGGCTGGGCGCAAGTCAATGGGGTAGGGACTGGCGTGGCCAAGGAAGGCTGGGGTTaGAGTCCTGGCCTAAATTCA +
Preference number: 5 (lower is better)
Translates to: RMCNVGWAQVNGVGTGVAKEGWG*SPGLNS
Trigger: TGAATTTAGGCCAGGACTCAAACCCCAGCCTTCCTT...GGCCACGCCAGTCCCTACCCCATTGACTTGCGCCCAGCCCACATTACACATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp ACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGAACAGCTGGAAAGTTCTaGAACGAGCCCACGGGAAAC +
Preference number: 5 (lower is better)
Translates to: TLSNQGWSGLGHAGQVQGTAGKF*NEPTGN
Trigger: GTTTCCCGTGGGCTCGTTCAAGAACTTTCCAGCTGT...TCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS TCA 90 bp CGTTCACCACCACGCGGTTGGCGAAGGTCTCATTGTGCGCTTCGATaGGGAGCGTCCTCTCCTTCCAGTTCAAGATGTTTGTCTGCACGA +
Preference number: 5 (lower is better)
Translates to: RSPPRGWRRSHCALR*GASSPSSSRCLSAR
Trigger: TCGTGCAGACAAACATCTTGAACTGGAAGGAGAGGACGCTCCTCATCGAAGCGCACAATGAGACCTTCGCCAACCGCGTGGTGGTGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS GCA 90 bp GCTTCGATGAGGAGCGTCCTCTCCTTCCAGTTCAAGATGTTTGTCTaGACGAAGACCACGTGCTCAACACCTGCGATCTTCCGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ASMRSVLSFQFKMFV*TKTTCSTPAIFRSS
Trigger: GCTGCTGCGGAAGATCGCAGGTGTTGAGCACGTGGTCTTCGTGCAGACAAACATCTTGAACTGGAAGGAGAGGACGCTCCTCATCGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS GCA 90 bp CTGCAGTGCTCGTTCACCACCACGCGGTTGGCGAAGGTCTCATTGTaGGCTTCGATGAGGAGCGTCCTCTCCTTCCAGTTCAAGATGTTT +
Preference number: 5 (lower is better)
Translates to: LQCSFTTTRLAKVSL*ASMRSVLSFQFKMF
Trigger: AAACATCTTGAACTGGAAGGAGAGGACGCTCCTCATCGAAGCGCACAATGAGACCTTCGCCAACCGCGTGGTGGTGAACGAGCACTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS-3UTR CAA 90 bp ACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATGCTGGCCAAGTGCAGGGATTGGGAATCTTGCCTTaGTGGGTCTCCTGTAACCAG +
Preference number: 5 (lower is better)
Translates to: TLSNQGWSGLGHAGQVQGLGILP*WVSCNQ
Trigger: CTGGTTACAGGAGACCCACAAAGGCAAGATTCCCAA...TCCCTGCACTTGGCCAGCATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTCCCAGGACCCAGCCTTaGTCGATCAGCTGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: PGDMGAISFENVSFQSVGPRTQP*SISCPL
Trigger: CAGCGGGCAGCTGATCGACAAAGGCTGGGTCCTGGG...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GGAGATGGTTCTGTCCTTGCAATTTCAAGAGCCCTGACACCACCCACAGGCCAGCACCCACTAGTGCTTTaGAGAGCAGGTGGTTGGTTC +
Preference number: 5 (lower is better)
Translates to: GDGSVLAISRALTPPTGQHPLVL*RAGGWF
Trigger: GAACCAACCACCTGCTCTCAAAAGCACTAGTGGGTG...CTGGCCTGTGGGTGGTGTCAGGGCTCTTGAAATTGCAAGGACAGAACCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp AGACCTCCACATGGGAGGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTCACCAAGCACATCTaGATACTGCATAACAGAACG +
Preference number: 5 (lower is better)
Translates to: RPPHGRRAGRSRCHHGYLLTKHI*ILHNRT
Trigger: CGTTCTGTTATGCAGTATCAAGATGTGCTTGGTGAG...CAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCCTCCCATGTGGAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GTCCCAGGCCCTGCAGTTAGCTGGCTTCTCATTCTGGACATTTCTGGACACTGGCACTTTCTCTCTTCCTaGGGTTTGGGGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: VPGPAVSWLLILDISGHWHFLSS*GLGLRL
Trigger: CAGCCTCAACCCCAAACCCAAGGAAGAGAGAAAGTG...CCAGTGTCCAGAAATGTCCAGAATGAGAAGCCAGCTAACTGCAGGGCCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTCCTGAAATTATAGGCTaGGGGCTGCTGGCAGCCATC +
Preference number: 5 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIPEIIG*GLLAAI
Trigger: GATGGCTGCCAGCAGCCCCAAGCCTATAATTTCAGG...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GTGCTTTTGAGAGCAGGTGGTTGGTTCCAGAGATGTGCATGTGATCCAGGCTGGCGCCTGGTGTTCTCATaGATGAAGGGGCTGATCAGT +
Preference number: 5 (lower is better)
Translates to: VLLRAGGWFQRCACDPGWRLVFS*MKGLIS
Trigger: ACTGATCAGCCCCTTCATCAATGAGAACACCAGGCG...CCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GAAACCCAGGGCTCTCCCACCCTCTCCAATCAGGGATGGTCAGGCTTAGGCCATTCAAAAGCCAAAAGCTaGGCAATCCCTTCCTTGGAT +
Preference number: 5 (lower is better)
Translates to: ETQGSPTLSNQGWSGLGHSKAKS*AIPSLD
Trigger: ATCCAAGGAAGGGATTGCCAAGCTTTTGGCTTTTGA...ATGGCCTAAGCCTGACCATCCCTGATTGGAGAGGGTGGGAGAGCCCTGGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTAGGAGACTGGTATCTTaGCACCATGTTCACGCTGGA +
Preference number: 5 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIRRLVS*HHVHAG
Trigger: TCCAGCGTGAACATGGTGCAAAGATACCAGTCTCCT...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATGCCAGTTCTGGATCCTaGCCATCCGCTCCAGACACC +
Preference number: 5 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNASSGS*PSAPDT
Trigger: GGTGTCTGGAGCGGATGGCAAGGATCCAGAACTGGC...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GTGCTTTTGAGAGCAGGTGGTTGGTTCCAGAGATGTGCATGTGATCCAGGCTGGGATCATGCTTTTGTGTaGAAGCACCTGGGCATGGGT +
Preference number: 5 (lower is better)
Translates to: VLLRAGGWFQRCACDPGWDHAFV*KHLGMG
Trigger: ACCCATGCCCAGGTGCTTCAACACAAAAGCATGATC...CCAGCCTGGATCACATGCACATCTCTGGAACCAACCACCTGCTCTCAAAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GGAGAGCCGGCCGTAGCAGATGCCACCATGGATACCTGCTGGTTCTGTGGTCCAGAACTCATGTCAATATaGAACCTAGTTCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: GEPAVADATMDTCWFCGPELMSI*NLVPES
Trigger: TGACTCTGGAACTAGGTTCAATATTGACATGAGTTC...TGGACCACAGAACCAGCAGGTATCCATGGTGGCATCTGCTACGGCCGGCTCTCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCCTTGCAATTTCAGATCAGGCTTCAAGTaGGTGACCCCTGACTGGCTG +
Preference number: 5 (lower is better)
Translates to: AWSSLHEAGRRWFCPCNFRSGFK*VTPDWL
Trigger: CAGCCAGTCAGGGGTCACCAACTTGAAGCCTGATCT...GAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTTTTCCTGGCCCTGCATaGCTGAGCCTGCATAAAGAT +
Preference number: 5 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIFPGPA*LSLHKD
Trigger: ATCTTTATGCAGGCTCAGCAATGCAGGGCCAGGAAA...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTCAGGACCCAGGGAATTaGCTTTGTTGCTTAAGCCAG +
Preference number: 5 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIQDPGN*LCCLSQ
Trigger: CTGGCTTAAGCAACAAAGCAAATTCCCTGGGTCCTG...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTAATGCTGCTTGTGGGTaGCTTCTGTCCTGGTCACAA +
Preference number: 5 (lower is better)
Translates to: DARSPSQGTSSLCGSGEINAACG*LLSWSQ
Trigger: TTGTGACCAGGACAGAAGCAACCCACAAGCAGCATT...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTAGGGGTGCAGAGGTGTaGTCTTCATGCAACAATAGT +
Preference number: 5 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIRGAEV*SSCNNS
Trigger: ACTATTGTTGCATGAAGACAACACCTCTGCACCCCT...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATTTCCCCCTCTTGACGTaGGCGGTGTACTGCTTCATG +
Preference number: 5 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNFPLLT*AVYCFM
Trigger: CATGAAGCAGTACACCGCCAACGTCAAGAGGGGGAA...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp ATGGATTTTCACTTCAGGATGTGCTGTTCCCCACAAAGAGCAGCGCCTGTAACTAGGCACTTCCAGCCTTaGTGGCTCAGGGGAAATTCA +
Preference number: 5 (lower is better)
Translates to: MDFHFRMCCSPQRAAPVTRHFQP*WLRGNS
Trigger: TGAATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCT...AGTTACAGGCGCTGCTCTTTGTGGGGAACAGCACATCCTGAAGTGAAAATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAAGCCTGGGCGCCTGCTaGGTGTGGTACAGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRSLGAC*VWYRLN
Trigger: GTTCAGCCTGTACCACACCAAGCAGGCGCCCAGGCT...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GCTTGGTCTTCCTTACACGAAGCCGGAAGGAGATGGTTCTGTCCTTGCAATTTCGCAAGAAGAATGACCTaGATAATGCTTCCACGTGGG +
Preference number: 5 (lower is better)
Translates to: AWSSLHEAGRRWFCPCNFARRMT*IMLPRG
Trigger: CCCACGTGGAAGCATTATCAAGGTCATTCTTCTTGC...GAAATTGCAAGGACAGAACCATCTCCTTCCGGCTTCGTGTAAGGAAGACCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GATGCAAGAAGCCCAAGCCAAGGCACTTCCAGCCTTTGTGGCTCAGGGGAAATTGCAAAGCAATCTATTTaGTTCAGATACCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: DARSPSQGTSSLCGSGEIAKQSI*FRYLRS
Trigger: GCTTCTCAGGTATCTGAACAAAATAGATTGCTTTGC...AATTTCCCCTGAGCCACAAAGGCTGGAAGTGCCTTGGCTTGGGCTTCTTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp TTGCAAGTTGCTCTCAGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTTGAGCTTCTCTTGTCCATaGGGGGAATGGCCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: LQVALSNKCLVIWEQLVLSFSCP*GEWPSP
Trigger: TGGGGAGGGCCATTCCCCCAATGGACAAGAGAAGCT...CAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCTGAGAGCAACTTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp CCTGGTGATATGGGAGCAATTAGTTTTGAGAACGTCTCCTTCCAATCAGTCGGTTCATCTTTGGGAATCTaGCCTTTGTGGGTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: PGDMGAISFENVSFQSVGSSLGI*PLWVSC
Trigger: ACAGGAGACCCACAAAGGCAAGATTCCCAAAGATGA...ACCGACTGATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCATATCACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp GTTGAAGCACCTGGGCATGGGTCTCTGTGGCTTACAACCAAAAACAGTCATAATAGGATGTGCTCATCTTaGGGAATCTTGCCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: VEAPGHGSLWLTTKNSHNRMCSS*GILPLW
Trigger: CCACAAAGGCAAGATTCCCAAAGATGAGCACATCCT...ATTATGACTGTTTTTGGTTGTAAGCCACAGAGACCCATGCCCAGGTGCTTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGACCACAAAACCACCCCTaGGCTCAGTTACTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRPQNHP*AQLLQQ
Trigger: CTGCTGCAGTAACTGAGCCAAGGGGTGGTTTTGTGG...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp ATGGATTTTCACTTCAGGATGTGCTGTTCCCCACAAAGAGCAGCGCCTGTAACTTGGGAGCAATTAGTTTaGAGAACGTCTCCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: MDFHFRMCCSPQRAAPVTWEQLV*RTSPSN
Trigger: ATTGGAAGGAGACGTTCTCAAAACTAATTGCTCCCA...AGTTACAGGCGCTGCTCTTTGTGGGGAACAGCACATCCTGAAGTGAAAATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp TTGCAAGTTGCTCTCAGCAATAAATGCCTGGTGATATGGGAGCAATTAGTTTTGTCCAGTTCAAGATGTTaGTCTGCACGAAGACCACGT +
Preference number: 5 (lower is better)
Translates to: LQVALSNKCLVIWEQLVLSSSRC*SARRPR
Trigger: ACGTGGTCTTCGTGCAGACAAACATCTTGAACTGGA...CAAAACTAATTGCTCCCATATCACCAGGCATTTATTGCTGAGAGCAACTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp CTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAGTGGTTTACGAACTCGTGTaGGAGCACATTCAAAGCAGT +
Preference number: 5 (lower is better)
Translates to: LFSLDNKFYSREGEFQRVVYELV*EHIQSS
Trigger: ACTGCTTTGAATGTGCTCCAACACGAGTTCGTAAAC...CACTCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS-3UTR CAA 90 bp ATACTATTCTCATTGGACAATAAATTTTACAGCAGGGAGGGGGAATTCCAGAGAAGGGAATTTGCTTTGTaGCTTAAGCCAGTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: ILFSLDNKFYSREGEFQRREFAL*LKPVWA
Trigger: AGCCCAAACTGGCTTAAGCAACAAAGCAAATTCCCT...TCTCTGGAATTCCCCCTCCCTGCTGTAAAATTTATTGTCCAATGAGAATAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 72 bp TGCCCAGGACCCAGCCTTTGTCGATCAGCTGCCCGCTaGCCCTGGTCCCCGGTTCCCGGGCGCCCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: CPGPSLCRSAAR*PWSPVPGRPAW
Trigger: CCAGGCTGGGCGCCCGGGAACCGGGGACCAGGGCCAGCGGGCAGCTGATCGACAAAGGCTGGGTCCTGGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS GCA 72 bp CCCCGTCCGGGCTGCGGGACTCGCGCAAGACCTCGCTaGCCAGGAAGACTGGGATCTGTGGGCACGTGGGGA +
Preference number: 6 (lower is better)
Translates to: PRPGCGTRARPR*PGRLGSVGTWG
Trigger: TCCCCACGTGCCCACAGATCCCAGTCTTCCTGGGCAGCGAGGTCTTGCGCGAGTCCCGCAGCCCGGACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS GCA 72 bp AGCTCCGCTCCACCACGTGCACAGCCCCGTCCGGGCTaGGGGACTCGCGCAAGACCTCGCTGCCCAGGAAGA +
Preference number: 6 (lower is better)
Translates to: SSAPPRAQPRPG*GTRARPRCPGR
Trigger: TCTTCCTGGGCAGCGAGGTCTTGCGCGAGTCCCGCAGCCCGGACGGGGCTGTGCACGTGGTGGAGCGGAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS GCA 72 bp CTGGTCCCCGGTTCCCGGGCGCCCAGCCTGGGCGCCTaGTTGGTGTGGTACAGGCTGAACACCACGTCCCCT +
Preference number: 6 (lower is better)
Translates to: LVPGSRAPSLGA*LVWYRLNTTSP
Trigger: AGGGGACGTGGTGTTCAGCCTGTACCACACCAAGCAGGCGCCCAGGCTGGGCGCCCGGGAACCGGGGACCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 72 bp CGGTCCAGCCTGGTTGCGGGCATCCTCCTCACGGACTaGGGCAGGCGTCCAGCGCGGAATGTGCGAGGTACC +
Preference number: 6 (lower is better)
Translates to: RSSLVAGILLTD*GRRPARNVRGT
Trigger: GGTACCTCGCACATTCCGCGCTGGACGCCTGCCCCAGTCCGTGAGGAGGATGCCCGCAACCAGGCTGGACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 72 bp GGTTCCCGGGCGCCCAGCCTGGGCGCCTGCTTGGTGTaGTACAGGCTGAACACCACGTCCCCTCGCAGGATG +
Preference number: 6 (lower is better)
Translates to: GSRAPSLGACLV*YRLNTTSPRRM
Trigger: CATCCTGCGAGGGGACGTGGTGTTCAGCCTGTACCACACCAAGCAGGCGCCCAGGCTGGGCGCCCGGGAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 72 bp CGAGCGGGCGGCCCTGAAACACTGGGCCCGGCTATCTaGAGACCAGGGAGCTGCTATGAGACTGGCCGGAGG +
Preference number: 6 (lower is better)
Translates to: RAGGPETLGPAI*RPGSCYETGRR
Trigger: CCTCCGGCCAGTCTCATAGCAGCTCCCTGGTCTCCAGATAGCCGGGCCCAGTGTTTCAGGGCCGCCCGCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 72 bp CTGGACACTGGAGGCGAGCGGGCGGCCCTGAAACACTaGGCCCGGCTATCTGGAGACCAGGGAGCTGCTATG +
Preference number: 6 (lower is better)
Translates to: LDTGGERAALKH*ARLSGDQGAAM
Trigger: CATAGCAGCTCCCTGGTCTCCAGATAGCCGGGCCCAGTGTTTCAGGGCCGCCCGCTCGCCTCCAGTGTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS TCA 72 bp CGCCCAGCCTGGGCGCCTGCTTGGTGTGGTACAGGCTaGACACCACGTCCCCTCGCAGGATGTCAAAGTCCC +
Preference number: 6 (lower is better)
Translates to: RPAWAPAWCGTG*TPRPLAGCQSP
Trigger: GGGACTTTGACATCCTGCGAGGGGACGTGGTGTTCAGCCTGTACCACACCAAGCAGGCGCCCAGGCTGGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS TCA 72 bp GGACATTTCTGGACACTGGAGGCGAGCGGGCGGCCCTaGAACACTGGGCCCGGCTATCTGGAGACCAGGGAG +
Preference number: 6 (lower is better)
Translates to: GHFWTLEASGRP*NTGPGYLETRE
Trigger: CTCCCTGGTCTCCAGATAGCCGGGCCCAGTGTTTCAGGGCCGCCCGCTCGCCTCCAGTGTCCAGAAATGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS GCA 72 bp GCCAGGTCTGAAGGAGGAGATCCACCTGGTGCTGCTTaGGCCAGCTCAAGGACTGGCGCAGCATTTCCCGGG +
Preference number: 6 (lower is better)
Translates to: ARSEGGDPPGAA*ASSRTGAAFPG
Trigger: CCCGGGAAATGCTGCGCCAGTCCTTGAGCTGGCGCAAGCAGCACCAGGTGGATCTCCTCCTTCAGACCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS GCA 72 bp GAAACACTGGGCCCGGCTATCTGGAGACCAGGGAGCTaGTATGAGACTGGCCGGAGGAGGAGGACGAGGTGG +
Preference number: 6 (lower is better)
Translates to: ETLGPAIWRPGS*YETGRRRRTRW
Trigger: CCACCTCGTCCTCCTCCTCCGGCCAGTCTCATAGCAGCTCCCTGGTCTCCAGATAGCCGGGCCCAGTGTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 72 bp GCGCAAGACCTCGCTGCCCAGGAAGACTGGGATCTGTaGGCACGTGGGGAAACGCTTCTCGTAGGCCGCCAT +
Preference number: 6 (lower is better)
Translates to: AQDLAAQEDWDL*ARGETLLVGRH
Trigger: ATGGCGGCCTACGAGAAGCGTTTCCCCACGTGCCCACAGATCCCAGTCTTCCTGGGCAGCGAGGTCTTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS CCA 72 bp GCGGGACTCGCGCAAGACCTCGCTGCCCAGGAAGACTaGGATCTGTGGGCACGTGGGGAAACGCTTCTCGTA +
Preference number: 6 (lower is better)
Translates to: AGLAQDLAAQED*DLWARGETLLV
Trigger: TACGAGAAGCGTTTCCCCACGTGCCCACAGATCCCAGTCTTCCTGGGCAGCGAGGTCTTGCGCGAGTCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS CCA 72 bp AGATCCACCTGGTGCTGCTTGCGCCAGCTCAAGGACTaGCGCAGCATTTCCCGGGCCTTGTCCAGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: RSTWCCLRQLKD*RSISRALSRWK
Trigger: CTTCCACCTGGACAAGGCCCGGGAAATGCTGCGCCAGTCCTTGAGCTGGCGCAAGCAGCACCAGGTGGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS GCA 72 bp TGTAACCAGTGCCGAAGCTGGATCAGGCAGCTCTCCTaGATGGGCGTGAGGTGGCCCAGGCACCTCTCAATG +
Preference number: 6 (lower is better)
Translates to: CNQCRSWIRQLS*MGVRWPRHLSM
Trigger: CATTGAGAGGTGCCTGGGCCACCTCACGCCCATGCAGGAGAGCTGCCTGATCCAGCTTCGGCACTGGTTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS CCA 72 bp AGGCGAGCACCTCACAGTAGTAGAGAAGTTTGCACTTaGGCCCGGGGCTGTGCAGAGCCGTCAGGACATCGT +
Preference number: 6 (lower is better)
Translates to: RRAPHSSREVCT*ARGCAEPSGHR
Trigger: ACGATGTCCTGACGGCTCTGCACAGCCCCGGGCCCAAGTGCAAACTTCTCTACTACTGTGAGGTGCTCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS GCA 72 bp TCGTTCACCACCACGCGGTTGGCGAAGGTCTCATTGTaGGCTTCGATGAGGAGCGTCCTCTCCTTCCAGTTC +
Preference number: 6 (lower is better)
Translates to: SFTTTRLAKVSL*ASMRSVLSFQF
Trigger: GAACTGGAAGGAGAGGACGCTCCTCATCGAAGCGCACAATGAGACCTTCGCCAACCGCGTGGTGGTGAACGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS CCA 72 bp GGACAGGAGACTGGTATCTTTGCACCATGTTCACGCTaGAGCACCAATGGAGGTCACCAGGCAGGGGTGTGC +
Preference number: 6 (lower is better)
Translates to: GQETGIFAPCSR*STNGGHQAGVC
Trigger: GCACACCCCTGCCTGGTGACCTCCATTGGTGCTCCAGCGTGAACATGGTGCAAAGATACCAGTCTCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS TCA 72 bp GCGTCCAGCGCGGAATGTGCGAGGTACCCTGGGAGATaGGCTCATTCAGGTAATGCTCAATCACCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: ASSAECARYPGR*AHSGNAQSPPS
Trigger: GGAAGGAGGTGATTGAGCATTACCTGAATGAGCTCATCTCCCAGGGTACCTCGCACATTCCGCGCTGGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS GCA 72 bp TTCCAGTTCAAGATGTTTGTCTGCACGAAGACCACGTaGTCAACACCTGCGATCTTCCGCAGCAGCCGCGGG +
Preference number: 6 (lower is better)
Translates to: FQFKMFVCTKTT*STPAIFRSSRG
Trigger: CCCGCGGCTGCTGCGGAAGATCGCAGGTGTTGAGCACGTGGTCTTCGTGCAGACAAACATCTTGAACTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS CCA 72 bp TGTGCTCCTGCTCCTCTTCTGTCATGTAGAGGGACTTaGGGACCAGCCCTCCTTCGGGGACATTACACACAC +
Preference number: 6 (lower is better)
Translates to: CAPAPLLSCRGT*GPALLRGHYTH
Trigger: GTGTGTGTAATGTCCCCGAAGGAGGGCTGGTCCCCAAGTCCCTCTACATGACAGAAGAGGAGCAGGAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251170.12
CDS TCA 72 bp CCACGCGGTTGGCGAAGGTCTCATTGTGCGCTTCGATaGGGAGCGTCCTCTCCTTCCAGTTCAAGATGTTTG +
Preference number: 6 (lower is better)
Translates to: PRGWRRSHCALR*GASSPSSSRCL
Trigger: CAAACATCTTGAACTGGAAGGAGAGGACGCTCCTCATCGAAGCGCACAATGAGACCTTCGCCAACCGCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS CAA 90 bp CAGCTCAAACGGGTACTTGTAGACTCGGACAGGAGACTGGTATCTTaGCACCATGTTCACGCTGGAGCACCAATGGAGGTCACCAGGCAG +
Preference number: 6 (lower is better)
Translates to: QLKRVLVDSDRRLVS*HHVHAGAPMEVTRQ
Trigger: CTGCCTGGTGACCTCCATTGGTGCTCCAGCGTGAACATGGTGCAAAGATACCAGTCTCCTGTCCGAGTCTACAAGTACCCGTTTGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS CAA 72 bp CGGGTACTTGTAGACTCGGACAGGAGACTGGTATCTTaGCACCATGTTCACGCTGGAGCACCAATGGAGGTC +
Preference number: 6 (lower is better)
Translates to: RVLVDSDRRLVS*HHVHAGAPMEV
Trigger: GACCTCCATTGGTGCTCCAGCGTGAACATGGTGCAAAGATACCAGTCTCCTGTCCGAGTCTACAAGTACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS GCA 72 bp AGGAGCGTCCTCTCCTTCCAGTTCAAGATGTTTGTCTaGACGAAGACCACGTGCTCAACACCTGCGATCTTC +
Preference number: 6 (lower is better)
Translates to: RSVLSFQFKMFV*TKTTCSTPAIF
Trigger: GAAGATCGCAGGTGTTGAGCACGTGGTCTTCGTGCAGACAAACATCTTGAACTGGAAGGAGAGGACGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1
CDS GCA 72 bp ATCACCTCCTTCCCCCTCTTGACGTTGGCGGTGTACTaGTTCATGGCGATCTTCTCCAAGGCATTTTCAAAG +
Preference number: 6 (lower is better)
Translates to: ITSFPLLTLAVY*FMAIFSKAFSK
Trigger: CTTTGAAAATGCCTTGGAGAAGATCGCCATGAAGCAGTACACCGCCAACGTCAAGAGGGGGAAGGAGGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251170.12
ENST00000587469.1