RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC14L4 (Homo sapiens)

Ensembl gene IDs: ENSG00000133488

Ensembl transcript IDs: ENST00000255858.12, ENST00000320982.3, ENST00000321205.9, ENST00000381982.3

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTaGTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCTGGGCCTGC +
Preference number: 1 (lower is better)
Translates to: SIQWWQNKLGWAPVL*WNQDPHPAASSWAC
Trigger: GCAGGCCCAGCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR TCA 90 bp GAGGTGGCTGGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCCTTaGGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCGGGAAGCAGCA +
Preference number: 1 (lower is better)
Translates to: EVAGVFTVLGRVSSP*DSAASPQRPCREAA
Trigger: TGCTGCTTCCCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCTCCCCAACACAGTGAAGACCCCAGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR GCA 90 bp TGGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCCTTGAGACTCTaGAGCGTCTCCTCAGAGGCCTTGTCGGGAAGCAGCACCTCCACA +
Preference number: 1 (lower is better)
Translates to: WGLHCVGEGLIALRL*SVSSEALSGSSTST
Trigger: TGTGGAGGTGCTGCTTCCCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCTCCCCAACACAGTGAAGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR TCA 90 bp GCCCCTTCCTGCTTGGCCACTGTGCCAGGTGAGCCTACAATGAGATaGAATGGTGACGTGGGACAAGTGGCTCTCTGCAGCCACCTCCAG +
Preference number: 1 (lower is better)
Translates to: APSCLATVPGEPTMR*NGDVGQVALCSHLQ
Trigger: CTGGAGGTGGCTGCAGAGAGCCACTTGTCCCACGTCACCATTTCATCTCATTGTAGGCTCACCTGGCACAGTGGCCAAGCAGGAAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR TCA 90 bp TGGTGGCCCCTTCCTGCTTGGCCACTGTGCCAGGTGAGCCTACAATaGGATGAAATGGTGACGTGGGACAAGTGGCTCTCTGCAGCCACC +
Preference number: 1 (lower is better)
Translates to: WWPLPAWPLCQVSLQ*DEMVTWDKWLSAAT
Trigger: GGTGGCTGCAGAGAGCCACTTGTCCCACGTCACCATTTCATCTCATTGTAGGCTCACCTGGCACAGTGGCCAAGCAGGAAGGGGCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR GCA 90 bp AATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTaGTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCTGGG +
Preference number: 1 (lower is better)
Translates to: NFPSSGGRTNLDGPQ*SAGTRTLTQLPPAG
Trigger: CCCAGCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR CCA 90 bp GCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTaGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGC +
Preference number: 1 (lower is better)
Translates to: AHPLKLEHQAWVSPG*LDLVKMGERAASAS
Trigger: GCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR CCA 90 bp GGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATaGGTGAGTCCTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGG +
Preference number: 1 (lower is better)
Translates to: GPRNHAHPLKLEHQA*VSPGWLDLVKMGER
Trigger: CCTTTCACCCATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR CCA 90 bp GTCCATTTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATaGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCC +
Preference number: 1 (lower is better)
Translates to: VHFQFSIQWWQNKLG*APVLCWNQDPHPAA
Trigger: GGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAAATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR CCA 90 bp CCCAGTCCATTTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTaGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGC +
Preference number: 1 (lower is better)
Translates to: PSPFPIFHPVVAEQT*MGPSALLEPGPSPS
Trigger: GCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAAATGGACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR CCA 90 bp ATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGAATCTTCAGCATaGGCTATGCACTGGTGGCCCCTTCCTGCTTGGCCACTGTGCCAG +
Preference number: 1 (lower is better)
Translates to: ILWEQGKRFLSESSA*AMHWWPLPAWPLCQ
Trigger: CTGGCACAGTGGCCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAAGATTCAGACAGGAACCTCTTTCCCTGTTCCCAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR TCA 90 bp CATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTaGATCTTCAGCATGGGCTATGCACTGGTGGCCCCTTCCTGCTTG +
Preference number: 1 (lower is better)
Translates to: HSQPHSLGTGKEVPV*IFSMGYALVAPSCL
Trigger: CAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAAGATTCAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR CCA 90 bp GTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTaGGAACAGGGAAAGAGGTTCCTGTCTGAATCTTCAGCATGGGCT +
Preference number: 1 (lower is better)
Translates to: VDWIIFSVLILSRIL*EQGKRFLSESSAWA
Trigger: AGCCCATGCTGAAGATTCAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR GCA 90 bp TCAACTGGAAGGCTGAGCATGGCTTTTTCCTCTGATGGTTACCCATaGCAGGCCCCACCTCTCCATGTCCAATGTTCTTTCTTTATTTGT +
Preference number: 1 (lower is better)
Translates to: STGRLSMAFSSDGYP*QAPPLHVQCSFFIC
Trigger: ACAAATAAAGAAAGAACATTGGACATGGAGAGGTGGGGCCTGGCATGGGTAACCATCAGAGGAAAAAGCCATGCTCAGCCTTCCAGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp TGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCTGGCTGGTGGCCCCTTCCTaGTTGGCCACTGTGCCAGGT +
Preference number: 2 (lower is better)
Translates to: WAPVLCWNQDPHPAASSWLVAPS*LATVPG
Trigger: ACCTGGCACAGTGGCCAAGCAGGAAGGGGCCACCAG...CCAGCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GGGTCTCATCGCCTTGAGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCGGGAAGCAGCACCACCCTGCCTaGGAAGGCAGGGGTCAGAGG +
Preference number: 2 (lower is better)
Translates to: GSHRLETLQRLLRGLVGKQHHPA*EGRGQR
Trigger: CCTCTGACCCCTGCCTTCCCAGGCAGGGTGGTGCTG...CTTCCCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp AGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGACCACGCACACCCCCTaGAGCTGGAACACCAGGCAT +
Preference number: 2 (lower is better)
Translates to: RNHAHPLKLEHQAWVSPGTTHTP*SWNTRH
Trigger: ATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGT...CCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR CCA 90 bp GATGAAATGGTGACGTGGGACAAGTGGCTCTCTGCAGCCACCTCCAGCACCACCCAGCACCACCCTGCCTaGGAAGGCAGGGGTCAGAGG +
Preference number: 2 (lower is better)
Translates to: DEMVTWDKWLSAATSSTTQHHPA*EGRGQR
Trigger: CCTCTGACCCCTGCCTTCCCAGGCAGGGTGGTGCTG...GGTGGTGCTGGAGGTGGCTGCAGAGAGCCACTTGTCCCACGTCACCATTTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR CAA 90 bp AGAGGTGGCTGGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCCTaGAGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCGGGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: RGGWGLHCVGEGLIA*RLCSVSSEALSGSS
Trigger: GCTGCTTCCCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCTCCCCAACACAGTGAAGACCCCAGCCACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp TGCACAGGTAGAGGTGGCTGGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCCACCACGCACACCCCCTaGAGCTGGAACACCAGGCAT +
Preference number: 2 (lower is better)
Translates to: CTGRGGWGLHCVGEGLIATTHTP*SWNTRH
Trigger: ATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGT...GGCGATGAGACCCTCCCCAACACAGTGAAGACCCCAGCCACCTCTACCTGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp GGCCTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCCTTCAGCATGGGCTATaGACTGGTGGCCCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: GLPTPADLLHAENRASLLLQHGL*TGGPFL
Trigger: CAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAAG...GAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp CCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAATGGGCCCCAGTGCTCTaGTGGAACCAGGACCCTCAC +
Preference number: 2 (lower is better)
Translates to: PEAGTPGMGESWVAGSCQWAPVL*WNQDPH
Trigger: GTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCA...TTGACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR CCA 90 bp TCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGGTGACGTGGGACAAGTaGCTCTCTGCAGCCACCTCC +
Preference number: 2 (lower is better)
Translates to: SSGGRTNLDGPQCSAGTRVTWDK*LSAATS
Trigger: GGAGGTGGCTGCAGAGAGCCACTTGTCCCACGTCAC...CCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GGTAGAGGTGGCTGGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCCTTGAGAGCATGGGCTATGCACTaGTGGCCCCTTCCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: GRGGWGLHCVGEGLIALRAWAMH*WPLPAW
Trigger: CCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGC...TCTCAAGGCGATGAGACCCTCCCCAACACAGTGAAGACCCCAGCCACCTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp AGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCAGGGTCTCATCGCCTTaGGACTCTGCAGCGTCTCCT +
Preference number: 2 (lower is better)
Translates to: SGGRTNLDGPQCSAGTRTRVSSP*DSAASP
Trigger: AGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCT...GGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp TCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGAGTCATACAGCTGGATaGCCTCAGGGGGCTGCCATG +
Preference number: 2 (lower is better)
Translates to: SSGGRTNLDGPQCSAGTRSHTAG*PQGAAM
Trigger: CATGGCAGCCCCCTGAGGTCATCCAGCTGTATGACT...CCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320982.3
3UTR-3UTR CCA 90 bp GGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCATCTGGCCCCTTCCTGCTTaGCCACTGTGCCAGGTGAGC +
Preference number: 2 (lower is better)
Translates to: GWILSRWVKGQLLQAGPIWPLPA*PLCQVS
Trigger: GCTCACCTGGCACAGTGGCCAAGCAGGAAGGGGCCA...GATGGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCGCATGGGCTATGCACTaGTGGCCCCTTCCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: GGWILSRWVKGQLLQAGPAWAMH*WPLPAW
Trigger: CCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGC...GGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GGCCTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTCTGAATCTTCAGCATaGGCTATGCACTGGTGGCCC +
Preference number: 2 (lower is better)
Translates to: GLPTPADLLHAENRASLLSESSA*AMHWWP
Trigger: GGGCCACCAGTGCATAGCCCATGCTGAAGATTCAGA...GAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp AGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGAGGACCCATCCTCAGTaGACTGGATCATCTTCAGCG +
Preference number: 2 (lower is better)
Translates to: RNHAHPLKLEHQAWVSPGRTHPQ*TGSSSA
Trigger: CGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCT...CCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR CCA 90 bp TTCAGCATGGGCTATGCACTGGTGGCCCCTTCCTGCTTGGCCACTGTGCCAGGTGTGGCAGAACAAACTTaGATGGGCCCCAGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: FSMGYALVAPSCLATVPGVAEQT*MGPSAL
Trigger: CAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC...ACCTGGCACAGTGGCCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp AGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGGCAGCTCACAGACTTTaGTGCGCTTCCGGATCATAT +
Preference number: 2 (lower is better)
Translates to: RNHAHPLKLEHQAWVSPGAAHRL*CASGSY
Trigger: ATATGATCCGGAAGCGCATCAAAGTCTGTGAGCTGC...CCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCATCGCATGGGCTATGCACTaGTGGCCCCTTCCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: GWILSRWVKGQLLQAGPIAWAMH*WPLPAW
Trigger: CCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGC...GATGGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp TCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGGGCATGGGTGAGTCCTaGGTGGCTGGATCTTGTCAA +
Preference number: 2 (lower is better)
Translates to: SSGGRTNLDGPQCSAGTRGMGES*VAGSCQ
Trigger: TTGACAAGATCCAGCCACCCAGGACTCACCCATGCC...CCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR CAA 90 bp AACAGCAGCTCACAGACTTTGATGCGCTTCCGGATCATATCCTGCTaGGAGGCTGACAGCAGGAGACCCTTGGGGTCGAGGGACCCAATG +
Preference number: 2 (lower is better)
Translates to: NSSSQTLMRFRIISC*EADSRRPLGSRDPM
Trigger: CATTGGGTCCCTCGACCCCAAGGGTCTCCTGCTGTCAGCCTCCAAGCAGGATATGATCCGGAAGCGCATCAAAGTCTGTGAGCTGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp AGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGAATGAGATGAAATGGTaGCGTGGGACAAGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: RNHAHPLKLEHQAWVSPGNEMKW*RGTSGS
Trigger: AGAGCCACTTGTCCCACGTCACCATTTCATCTCATT...CCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp GGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTTCTTGTCAAGATGGGTaGAAGGGCAGCTTCTGCAAG +
Preference number: 2 (lower is better)
Translates to: GPRNHAHPLKLEHQAWVSSCQDG*KGSFCK
Trigger: CTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGA...ACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR TCA 90 bp TTGAGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCGGGAAGCAGCACCTCCACATTCCTGCCCAGCTTCTaGGTTTGCAGCTCACACTCA +
Preference number: 2 (lower is better)
Translates to: LRLCSVSSEALSGSSTSTFLPSF*VCSSHS
Trigger: TGAGTGTGAGCTGCAAACTCAGAAGCTGGGCAGGAA...TGTGGAGGTGCTGCTTCCCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp GACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTGGTGGCCCCTTCCTaGTTGGCCACTGTGCCAGGT +
Preference number: 2 (lower is better)
Translates to: DPSSVDWIIFSVLILSRILVAPS*LATVPG
Trigger: ACCTGGCACAGTGGCCAAGCAGGAAGGGGCCACCAG...AATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp AGGGCTTCTCTGCTCTTCAGGCCTGAAGCTGTGATGTCCACAGGACCTAGGAACCTTCAGCATGGGCTATaGACTGGTGGCCCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: RASLLFRPEAVMSTGPRNLQHGL*TGGPFL
Trigger: CAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAAG...GTTCCTAGGTCCTGTGGACATCACAGCTTCAGGCCTGAAGAGCAGAGAAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp GTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACTCAGCCTCCCAAACTaGTGGGATTATAGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: VAEQTWMGPSALLEPGPSLSLPN*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCAGTTTGGGAGGCTGAG...TGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR GCA 90 bp TTCAGCATGGGCTATGCACTGGTGGCCCCTTCCTGCTTGGCCACTGTGCCAGGTTGCACCCATGAATGGTaGAGCTGCCAAGAGAACCAA +
Preference number: 2 (lower is better)
Translates to: FSMGYALVAPSCLATVPGCTHEW*SCQENQ
Trigger: TTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGCA...ACCTGGCACAGTGGCCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp GTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCATTCCGGATCATATCCTaGTTGGAGGCTGACAGCAGG +
Preference number: 2 (lower is better)
Translates to: VAEQTWMGPSALLEPGPSFRIIS*LEADSR
Trigger: CCTGCTGTCAGCCTCCAAGCAGGATATGATCCGGAA...TGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp TTCAGCATGGGCTATGCACTGGTGGCCCCTTCCTGCTTGGCCACTGTGCCAGGTCCATCTCGATCTTCCTaGCCAGCTTCTGAGTTTGCA +
Preference number: 2 (lower is better)
Translates to: FSMGYALVAPSCLATVPGPSRSS*PASEFA
Trigger: TGCAAACTCAGAAGCTGGGCAGGAAGATCGAGATGG...ACCTGGCACAGTGGCCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp CAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCGTGACGTGGGACAAGTaGCTCTCTGCAGCCACCTCC +
Preference number: 2 (lower is better)
Translates to: QRSHSQPHSLGTGKEVPVVTWDK*LSAATS
Trigger: GGAGGTGGCTGCAGAGAGCCACTTGTCCCACGTCAC...GACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp TCTGCAAGCAGGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTGGCCCCTTCCTGCTTaGCCACTGTGCCAGGTGAGC +
Preference number: 2 (lower is better)
Translates to: SASRTHPQWTGSSSAFSFWPLPA*PLCQVS
Trigger: GCTCACCTGGCACAGTGGCCAAGCAGGAAGGGGCCA...GAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCTGCTTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp TGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTTGGGTGAGTCCTGGGTaGCTGGATCTTGTCAAGATG +
Preference number: 2 (lower is better)
Translates to: WWQNKLGWAPVLCWNQDPWVSPG*LDLVKM
Trigger: CATCTTGACAAGATCCAGCCACCCAGGACTCACCCA...AGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR CCA 90 bp GTGGAGGGGAGGTCACTGGGAATTCCCTGGAGACTCAGTCGTTACCCACTCAACGGCATGGGTGAGTCCTaGGTGGCTGGATCTTGTCAA +
Preference number: 2 (lower is better)
Translates to: VEGRSLGIPWRLSRYPLNGMGES*VAGSCQ
Trigger: TTGACAAGATCCAGCCACCCAGGACTCACCCATGCC...GTTGAGTGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp CTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTTCGCTCAAACACCCAGTTaGAACAGGAATGCCTCGTGG +
Preference number: 2 (lower is better)
Translates to: LPTPADLLHAENRASLLFAQTPS*NRNASW
Trigger: CCACGAGGCATTCCTGTTCCAACTGGGTGTTTGAGC...GAAGAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp TCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGGGATCATATCCTGCTTaGAGGCTGACAGCAGGAGAC +
Preference number: 2 (lower is better)
Translates to: SSGGRTNLDGPQCSAGTRGSYPA*RLTAGD
Trigger: GTCTCCTGCTGTCAGCCTCCAAGCAGGATATGATCC...CCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp CTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTTCGTAGACCTCCACAGCTaGCTTCCACAGGTGTTTCAG +
Preference number: 2 (lower is better)
Translates to: LPTPADLLHAENRASLLFVDLHS*LPQVFQ
Trigger: CTGAAACACCTGTGGAAGCCAGCTGTGGAGGTCTAC...GAAGAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp TTGAGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCGGGAAGCAGCACCTCCACAGTAGACCTCCACAGCTaGCTTCCACAGGTGTTTCAG +
Preference number: 2 (lower is better)
Translates to: LRLCSVSSEALSGSSTSTVDLHS*LPQVFQ
Trigger: CTGAAACACCTGTGGAAGCCAGCTGTGGAGGTCTAC...TGTGGAGGTGCTGCTTCCCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp CAACAGCAGCTCACAGACTTTGATGCGCTTCCGGATCATATCCTGCTTGGAGGCCCCGAGTCATACAGCTaGATGACCTCAGGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: QQQLTDFDALPDHILLGGPESYS*MTSGGC
Trigger: GCAGCCCCCTGAGGTCATCCAGCTGTATGACTCGGG...GCCTCCAAGCAGGATATGATCCGGAAGCGCATCAAAGTCTGTGAGCTGCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320982.3
3UTR-3UTR TCA 90 bp TCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGCAGGTGAGCCTACAATaGGATGAAATGGTGACGTGG +
Preference number: 2 (lower is better)
Translates to: SSGGRTNLDGPQCSAGTRQVSLQ*DEMVTW
Trigger: CCACGTCACCATTTCATCTCATTGTAGGCTCACCTG...CCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp CTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTTCTCTTGTCAAGATGGGTaGAAGGGCAGCTTCTGCAAG +
Preference number: 2 (lower is better)
Translates to: LPTPADLLHAENRASLLFSCQDG*KGSFCK
Trigger: CTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGA...GAAGAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR TCA 90 bp GATGAAATGGTGACGTGGGACAAGTGGCTCTCTGCAGCCACCTCCAGCACCACCTCTTGTCAAGATGGGTaGAAGGGCAGCTTCTGCAAG +
Preference number: 2 (lower is better)
Translates to: DEMVTWDKWLSAATSSTTSCQDG*KGSFCK
Trigger: CTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGA...GGTGGTGCTGGAGGTGGCTGCAGAGAGCCACTTGTCCCACGTCACCATTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp TTTCCTCTGATGGTTACCCATGCCAGGCCCCACCTCTCCATGTCCAATGTTCTTGGACAAGTGGCTCTCTaGAGCCACCTCCAGCACCAC +
Preference number: 2 (lower is better)
Translates to: FPLMVTHARPHLSMSNVLGQVAL*SHLQHH
Trigger: GTGGTGCTGGAGGTGGCTGCAGAGAGCCACTTGTCC...AAGAACATTGGACATGGAGAGGTGGGGCCTGGCATGGGTAACCATCAGAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp GATGAAATGGTGACGTGGGACAAGTGGCTCTCTGCAGCCACCTCCAGCACCACCCAGTTGGAACAGGAATaGCTCGTGGCACTGGCTTTA +
Preference number: 2 (lower is better)
Translates to: DEMVTWDKWLSAATSSTTQLEQE*LVALAL
Trigger: TAAAGCCAGTGCCACGAGGCATTCCTGTTCCAACTG...GGTGGTGCTGGAGGTGGCTGCAGAGAGCCACTTGTCCCACGTCACCATTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp GCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTATGACCTCAGGGGGCTaGCATGTGACAATGTTGTCC +
Preference number: 2 (lower is better)
Translates to: AWVSPGWLDLVKMGERAAMTSGG*HVTMLS
Trigger: GGACAACATTGTCACATGGCAGCCCCCTGAGGTCAT...AGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320982.3
3UTR-3UTR CCA 90 bp GTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCAGATGAAATGGTGACGTaGGACAAGTGGCTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: VAEQTWMGPSALLEPGPSDEMVT*DKWLSA
Trigger: TGCAGAGAGCCACTTGTCCCACGTCACCATTTCATC...TGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCTCTGAATCTTCAGCATaGGCTATGCACTGGTGGCCC +
Preference number: 2 (lower is better)
Translates to: GGWILSRWVKGQLLQAGPSESSA*AMHWWP
Trigger: GGGCCACCAGTGCATAGCCCATGCTGAAGATTCAGA...GGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp CATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCATCTGAATCTTCAGCATaGGCTATGCACTGGTGGCCC +
Preference number: 2 (lower is better)
Translates to: HPVVAEQTWMGPSALLEPSESSA*AMHWWP
Trigger: GGGCCACCAGTGCATAGCCCATGCTGAAGATTCAGA...TGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp ATTTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCGCCCCAGTGCTCTGCTaGAACCAGGACCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: ISNFPSSGGRTNLDGPQCAPVLC*NQDPHP
Trigger: TGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGC...GCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR CCA 90 bp GTGAAGGGGTTGGAGTGCACAGGTAGAGGTGGCTGGGGTCTTCACTGTGTTGGGCGTTACCCACTCAACTaGAAGGCTGAGCATGGCTTT +
Preference number: 2 (lower is better)
Translates to: VKGLECTGRGGWGLHCVGRYPLN*KAEHGF
Trigger: AAAGCCATGCTCAGCCTTCCAGTTGAGTGGGTAACG...CCCAACACAGTGAAGACCCCAGCCACCTCTACCTGTGCACTCCAACCCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp TTGAGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCGGGAAGCAGCACCTCCACATCACTGGGAATTCCCTaGAGACTCAGTCGTTACCCA +
Preference number: 2 (lower is better)
Translates to: LRLCSVSSEALSGSSTSTSLGIP*RLSRYP
Trigger: TGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGA...TGTGGAGGTGCTGCTTCCCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp GTGAAGGGGTTGGAGTGCACAGGTAGAGGTGGCTGGGGTCTTCACTGTGTTGGGAATGAGATGAAATGGTaGCGTGGGACAAGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: VKGLECTGRGGWGLHCVGNEMKW*RGTSGS
Trigger: AGAGCCACTTGTCCCACGTCACCATTTCATCTCATT...CCCAACACAGTGAAGACCCCAGCCACCTCTACCTGTGCACTCCAACCCCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp TCCACAGGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGAAAGAGGTTCCTGTCTaGATCTTCAGCATGGGCTAT +
Preference number: 2 (lower is better)
Translates to: STGPRNHAHPLKLEHQAWKEVPV*IFSMGY
Trigger: ATAGCCCATGCTGAAGATTCAGACAGGAACCTCTTT...CCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCCTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp GCAGAGCACCTGTTCAGACTCTACGTATATGCACCCATGAATGGTGCAGCTGCCTCAGGCCTGAAGCTGTaGTGTCCACAGGACCTAGGA +
Preference number: 2 (lower is better)
Translates to: AEHLFRLYVYAPMNGAAASGLKL*CPQDLG
Trigger: TCCTAGGTCCTGTGGACATCACAGCTTCAGGCCTGA...GGCAGCTGCACCATTCATGGGTGCATATACGTAGAGTCTGAACAGGTGCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp ATTTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCCCTGCCCACCCCTGCTaGCCTCCTACATGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: ISNFPSSGGRTNLDGPQCPAHPC*PPTCRE
Trigger: TTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGG...GCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR TCA 90 bp ATCTGCTCAAACACCCAGTTGGAACAGGAATGCCTCGTGGCACTGGCTTTAGGAAGGGTCTCATCGCCTTaGGACTCTGCAGCGTCTCCT +
Preference number: 2 (lower is better)
Translates to: ICSNTQLEQECLVALALGRVSSP*DSAASP
Trigger: AGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCT...TCCTAAAGCCAGTGCCACGAGGCATTCCTGTTCCAACTGGGTGTTTGAGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp TCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGAATCTTCAGCATGGACAAGTGGCTCTCTaGAGCCACCTCCAGCACCAC +
Preference number: 2 (lower is better)
Translates to: SAAFSGNRERGSCLNLQHGQVAL*SHLQHH
Trigger: GTGGTGCTGGAGGTGGCTGCAGAGAGCCACTTGTCC...ATGCTGAAGATTCAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp CCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATCACGGACAAGTGGCTCTCTaGAGCCACCTCCAGCACCAC +
Preference number: 2 (lower is better)
Translates to: PMNGAAAKRTKAKCWQDHGQVAL*SHLQHH
Trigger: GTGGTGCTGGAGGTGGCTGCAGAGAGCCACTTGTCC...GTGATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp CCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCCTTCAGCATGGGCTATaGACTGGTGGCCCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: PSSVDWIIFSVLILSRILLQHGL*TGGPFL
Trigger: CAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAAG...GAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp CAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCCCATCTGAAGCAAACTaGCACCTGAGCACACAGCCC +
Preference number: 2 (lower is better)
Translates to: QFSIQWWQNKLGWAPVLCPSEAN*HLSTQP
Trigger: GGGCTGTGTGCTCAGGTGGCAGTTTGCTTCAGATGG...GCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp TTCAGACTCTACGTATATGCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAACAGCACCACCCTGCCTaGGAAGGCAGGGGTCAGAGG +
Preference number: 2 (lower is better)
Translates to: FRLYVYAPMNGAAAKRTKQHHPA*EGRGQR
Trigger: CCTCTGACCCCTGCCTTCCCAGGCAGGGTGGTGCTG...TTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGCATATACGTAGAGTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATTGGGCTATGCACTGGTaGCCCCTTCCTGCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: APMNGAAAKRTKAKCWQDWAMHW*PLPAWP
Trigger: TGGCCAAGCAGGAAGGGGCCACCAGTGCATAGCCCA...ATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCATCCTCAGCCGCATTCTCTaGGAACAGGGAAAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: GWILSRWVKGQLLQAGPILSRIL*EQGKRF
Trigger: GAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAG...GATGGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GGGTCTCATCGCCTTGAGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCGGGAAGTTTTCCATCCAGTGGTaGCAGAACAAACTTGGATGG +
Preference number: 2 (lower is better)
Translates to: GSHRLETLQRLLRGLVGKFSIQW*QNKLGW
Trigger: CCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAA...CTTCCCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCTCACTGGGAATTCCCTaGAGACTCAGTCGTTACCCA +
Preference number: 2 (lower is better)
Translates to: GGWILSRWVKGQLLQAGPSLGIP*RLSRYP
Trigger: TGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGA...GGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp TTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTCAGGCCTGAAGCTGTaGTGTCCACAGGACCTAGGA +
Preference number: 2 (lower is better)
Translates to: FQFSIQWWQNKLGWAPVLSGLKL*CPQDLG
Trigger: TCCTAGGTCCTGTGGACATCACAGCTTCAGGCCTGA...GAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR CCA 90 bp CCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGGGATCATATCCTGCTTaGAGGCTGACAGCAGGAGAC +
Preference number: 2 (lower is better)
Translates to: PIFHPVVAEQTWMGPSALGSYPA*RLTAGD
Trigger: GTCTCCTGCTGTCAGCCTCCAAGCAGGATATGATCC...CAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp CATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTTCTGCTCTTCAGGCCTaGAGCTGTGATGTCCACAGG +
Preference number: 2 (lower is better)
Translates to: HPQWTGSSSAFSFSAAFSSALQA*SCDVHR
Trigger: CCTGTGGACATCACAGCTTCAGGCCTGAAGAGCAGA...AGAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp TTCAGACTCTACGTATATGCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAACCTGCCCACCCCTGCTaGCCTCCTACATGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: FRLYVYAPMNGAAAKRTKPAHPC*PPTCRE
Trigger: TTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGG...TTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGCATATACGTAGAGTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp ATCTGCTCAAACACCCAGTTGGAACAGGAATGCCTCGTGGCACTGGCTTTAGGACATGGCTTTTTCCTCTaGTGGTTACCCATGCCAGGC +
Preference number: 2 (lower is better)
Translates to: ICSNTQLEQECLVALALGHGFFL*WLPMPG
Trigger: GCCTGGCATGGGTAACCATCAGAGGAAAAAGCCATG...TCCTAAAGCCAGTGCCACGAGGCATTCCTGTTCCAACTGGGTGTTTGAGCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp CATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTCCTCCACAGTGTAGCTaGGCTTCTTGGCATGCATCC +
Preference number: 2 (lower is better)
Translates to: HPQWTGSSSAFSFSAAFSPPQCS*ASWHAS
Trigger: GGATGCATGCCAAGAAGCTCAGCTACACTGTGGAGG...AGAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp AGCATGGCTTTTTCCTCTGATGGTTACCCATGCCAGGCCCCACCTCTCCATGTCCAGACTCTACGTATATaGACCCATGAATGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: SMAFSSDGYPCQAPPLHVQTLRI*THEWCS
Trigger: GCTGCACCATTCATGGGTGCATATACGTAGAGTCTG...GACATGGAGAGGTGGGGCCTGGCATGGGTAACCATCAGAGGAAAAAGCCATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGGATGAAATGGTGACGTaGGACAAGTGGCTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: GLDHLQRSHSQPHSLGTGDEMVT*DKWLSA
Trigger: TGCAGAGAGCCACTTGTCCCACGTCACCATTTCATC...CCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp CAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCGATGAAATGGTGACGTaGGACAAGTGGCTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: QRSHSQPHSLGTGKEVPVDEMVT*DKWLSA
Trigger: TGCAGAGAGCCACTTGTCCCACGTCACCATTTCATC...GACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp AGATGGTTTGCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATATGCTGGGCTATGCACTGGTaGCCCCTTCCTGCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: RWFAVSSSRAPVQTLRICWAMHW*PLPAWP
Trigger: TGGCCAAGCAGGAAGGGGCCACCAGTGCATAGCCCA...GCATATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGCAAACCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp AATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTCTCAGCCGCATTCTCTaGGAACAGGGAAAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: NFPSSGGRTNLDGPQCSALSRIL*EQGKRF
Trigger: GAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAG...AGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp ATCTGCTCAAACACCCAGTTGGAACAGGAATGCCTCGTGGCACTGGCTTTAGGATGGGTGAGTCCTGGGTaGCTGGATCTTGTCAAGATG +
Preference number: 2 (lower is better)
Translates to: ICSNTQLEQECLVALALGWVSPG*LDLVKM
Trigger: CATCTTGACAAGATCCAGCCACCCAGGACTCACCCA...TCCTAAAGCCAGTGCCACGAGGCATTCCTGTTCCAACTGGGTGTTTGAGCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGTCACTGGGAATTCCCTaGAGACTCAGTCGTTACCCA +
Preference number: 2 (lower is better)
Translates to: AFSFSAAFSGNRERGSCLSLGIP*RLSRYP
Trigger: TGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGA...CAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp TCTGCAAGCAGGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCCAGGTGAGCCTACAATaGGATGAAATGGTGACGTGG +
Preference number: 2 (lower is better)
Translates to: SASRTHPQWTGSSSAFSFQVSLQ*DEMVTW
Trigger: CCACGTCACCATTTCATCTCATTGTAGGCTCACCTG...GAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCTGCTTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp CACTCAACTGGAAGGCTGAGCATGGCTTTTTCCTCTGATGGTTACCCATGCCAGACGTATATGCACCCATaGATGGTGCAGCTGCCAAGA +
Preference number: 2 (lower is better)
Translates to: HSTGRLSMAFSSDGYPCQTYMHP*MVQLPR
Trigger: TCTTGGCAGCTGCACCATTCATGGGTGCATATACGT...CTGGCATGGGTAACCATCAGAGGAAAAAGCCATGCTCAGCCTTCCAGTTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR GCA 90 bp TTTCCTCTGATGGTTACCCATGCCAGGCCCCACCTCTCCATGTCCAATGTTCTTTGCACCCATGAATGGTaGAGCTGCCAAGAGAACCAA +
Preference number: 2 (lower is better)
Translates to: FPLMVTHARPHLSMSNVLCTHEW*SCQENQ
Trigger: TTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGCA...AAGAACATTGGACATGGAGAGGTGGGGCCTGGCATGGGTAACCATCAGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp TTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGAATGGCATGGGTGAGTCCTaGGTGGCTGGATCTTGTCAA +
Preference number: 2 (lower is better)
Translates to: FSFSAAFSGNRERGSCLNGMGES*VAGSCQ
Trigger: TTGACAAGATCCAGCCACCCAGGACTCACCCATGCC...ATTCAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp ATTTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCACGTATATGCACCCATaGATGGTGCAGCTGCCAAGA +
Preference number: 2 (lower is better)
Translates to: ISNFPSSGGRTNLDGPQCTYMHP*MVQLPR
Trigger: TCTTGGCAGCTGCACCATTCATGGGTGCATATACGT...GCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR TCA 90 bp CCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATCACGCAGCTCACAGACTTTaGTGCGCTTCCGGATCATAT +
Preference number: 2 (lower is better)
Translates to: PMNGAAAKRTKAKCWQDHAAHRL*CASGSY
Trigger: ATATGATCCGGAAGCGCATCAAAGTCTGTGAGCTGC...GTGATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGTTTTCCATCCAGTGGTaGCAGAACAAACTTGGATGG +
Preference number: 2 (lower is better)
Translates to: AFSFSAAFSGNRERGSCLFSIQW*QNKLGW
Trigger: CCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAA...CAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp TTCAGACTCTACGTATATGCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAACTCAGCCGCATTCTCTaGGAACAGGGAAAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: FRLYVYAPMNGAAAKRTKLSRIL*EQGKRF
Trigger: GAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAG...TTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGCATATACGTAGAGTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp TTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGAATCGTTACCCACTCAACTaGAAGGCTGAGCATGGCTTT +
Preference number: 2 (lower is better)
Translates to: FSFSAAFSGNRERGSCLNRYPLN*KAEHGF
Trigger: AAAGCCATGCTCAGCCTTCCAGTTGAGTGGGTAACG...ATTCAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp TTTCCTCTGATGGTTACCCATGCCAGGCCCCACCTCTCCATGTCCAATGTTCTTACCAAAGCTAAATGTTaGCAGGATCACAGCAGGTGT +
Preference number: 2 (lower is better)
Translates to: FPLMVTHARPHLSMSNVLTKAKC*QDHSRC
Trigger: ACACCTGCTGTGATCCTGCCAACATTTAGCTTTGGT...AAGAACATTGGACATGGAGAGGTGGGGCCTGGCATGGGTAACCATCAGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CCA 90 bp GCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATATGCACCCATGAATTTTCCATCCAGTGGTaGCAGAACAAACTTGGATGG +
Preference number: 2 (lower is better)
Translates to: AVSSSRAPVQTLRICTHEFSIQW*QNKLGW
Trigger: CCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAA...TTCATGGGTGCATATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR GCA 72 bp TGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTaGTGGAACCAGGACCCTCACCCAGCTGCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: WWQNKLGWAPVL*WNQDPHPAASS
Trigger: GCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR TCA 72 bp GGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCCTTaGGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCGG +
Preference number: 3 (lower is better)
Translates to: GVFTVLGRVSSP*DSAASPQRPCR
Trigger: CCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCTCCCCAACACAGTGAAGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR GCA 72 bp TCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTaGTCTGCTGGAACCAGGACCCTCACCCAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: SSGGRTNLDGPQ*SAGTRTLTQLP
Trigger: AGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR CCA 72 bp GGTGTGAAGGGGTTGGAGTGCACAGGTAGAGGTGGCTaGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCC +
Preference number: 3 (lower is better)
Translates to: GVKGLECTGRGG*GLHCVGEGLIA
Trigger: GGCGATGAGACCCTCCCCAACACAGTGAAGACCCCAGCCACCTCTACCTGTGCACTCCAACCCCTTCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CAA 90 bp AGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCGAGGGTCTCATCGCCTaGAGACTCTGCAGCGTCTCC +
Preference number: 3 (lower is better)
Translates to: SGGRTNLDGPQCSAGTRTEGLIA*RLCSVS
Trigger: GGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCTC...GGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CAA 90 bp ACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGAGGGACCCAATGATGTaGAAGTACACAGGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: TNLDGPQCSAGTRTLTQLRDPMM*KYTGQP
Trigger: AGGCTGCCCTGTGTACTTCAACATCATTGGGTCCCT...CAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR CCA 72 bp AACCACGCACACCCCCTGAAGCTGGAACACCAGGCATaGGTGAGTCCTGGGTGGCTGGATCTTGTCAAGATG +
Preference number: 3 (lower is better)
Translates to: NHAHPLKLEHQA*VSPGWLDLVKM
Trigger: CATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR CAA 90 bp TTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCGACAGCAGGAGACCCTaGGGGTCGAGGGACCCAATG +
Preference number: 3 (lower is better)
Translates to: FQFSIQWWQNKLGWAPVLDSRRP*GSRDPM
Trigger: CATTGGGTCCCTCGACCCCAAGGGTCTCCTGCTGTC...GAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CAA 90 bp TTCAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGGACAGCAGGAGACCCTaGGGGTCGAGGGACCCAATG +
Preference number: 3 (lower is better)
Translates to: FSVLILSRILWEQGKRFLDSRRP*GSRDPM
Trigger: CATTGGGTCCCTCGACCCCAAGGGTCTCCTGCTGTC...CAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CAA 90 bp TGCACAGGTAGAGGTGGCTGGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCCAGCAGCTCACAGACTTaGATGCGCTTCCGGATCATA +
Preference number: 3 (lower is better)
Translates to: CTGRGGWGLHCVGEGLIASSSQT*MRFRII
Trigger: TATGATCCGGAAGCGCATCAAAGTCTGTGAGCTGCT...GGCGATGAGACCCTCCCCAACACAGTGAAGACCCCAGCCACCTCTACCTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR GCA 72 bp GAAAGAGGTTCCTGTCTGAATCTTCAGCATGGGCTATaGACTGGTGGCCCCTTCCTGCTTGGCCACTGTGCC +
Preference number: 3 (lower is better)
Translates to: ERGSCLNLQHGL*TGGPFLLGHCA
Trigger: GGCACAGTGGCCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAAGATTCAGACAGGAACCTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR CCA 72 bp CTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTaGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCT +
Preference number: 3 (lower is better)
Translates to: LKLEHQAWVSPG*LDLVKMGERAA
Trigger: AGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR CCA 72 bp ACAGCAGGTGTGGAGGGGAGGTCACTGGGAATTCCCTaGAGACTCAGTCGTTACCCACTCAACTGGAAGGCT +
Preference number: 3 (lower is better)
Translates to: TAGVEGRSLGIP*RLSRYPLNWKA
Trigger: AGCCTTCCAGTTGAGTGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCCACACCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CAA 90 bp TGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTAGCAGCTCACAGACTTaGATGCGCTTCCGGATCATA +
Preference number: 3 (lower is better)
Translates to: WWQNKLGWAPVLCWNQDPSSSQT*MRFRII
Trigger: TATGATCCGGAAGCGCATCAAAGTCTGTGAGCTGCT...AGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR GCA 72 bp AACTCCATGTGCCTTCGGAGCATGTCTTCGGATTTCTaGAGGTCAAAGTTTCGAGCTCGCAGCCAGCGCAGG +
Preference number: 3 (lower is better)
Translates to: NSMCLRSMSSDF*RSKFRARSQRR
Trigger: CCTGCGCTGGCTGCGAGCTCGAAACTTTGACCTGCAGAAATCCGAAGACATGCTCCGAAGGCACATGGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320982.3
3UTR CCA 72 bp GAACAGGGAAAGAGGTTCCTGTCTGAATCTTCAGCATaGGCTATGCACTGGTGGCCCCTTCCTGCTTGGCCA +
Preference number: 3 (lower is better)
Translates to: EQGKRFLSESSA*AMHWWPLPAWP
Trigger: TGGCCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAAGATTCAGACAGGAACCTCTTTCCCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR CCA 72 bp CAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATaGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCAC +
Preference number: 3 (lower is better)
Translates to: QFSIQWWQNKLG*APVLCWNQDPH
Trigger: GTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR CAA 90 bp CCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGGTGGCTGGATCTaGTCAAGATGGGTGAAAGGG +
Preference number: 3 (lower is better)
Translates to: PIFHPVVAEQTWMGPSALLGGWI*SRWVKG
Trigger: CCCTTTCACCCATCTTGACAAGATCCAGCCACCCAG...CAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR CAA 90 bp TTCAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGGGTGGCAGAACAAACTaGGATGGGCCCCAGTGCTCT +
Preference number: 3 (lower is better)
Translates to: FSVLILSRILWEQGKRFLGGRTN*DGPQCS
Trigger: AGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACC...CAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR TCA 72 bp CTTCCTGCTTGGCCACTGTGCCAGGTGAGCCTACAATaGGATGAAATGGTGACGTGGGACAAGTGGCTCTCT +
Preference number: 3 (lower is better)
Translates to: LPAWPLCQVSLQ*DEMVTWDKWLS
Trigger: AGAGAGCCACTTGTCCCACGTCACCATTTCATCTCATTGTAGGCTCACCTGGCACAGTGGCCAAGCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR CCA 72 bp TTTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTaGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCC +
Preference number: 3 (lower is better)
Translates to: FPIFHPVVAEQT*MGPSALLEPGP
Trigger: GGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
3UTR-3UTR CAA 90 bp CACTCAACTGGAAGGCTGAGCATGGCTTTTTCCTCTGATGGTTACCCATGCCAGCTGGGTGGCTGGATCTaGTCAAGATGGGTGAAAGGG +
Preference number: 3 (lower is better)
Translates to: HSTGRLSMAFSSDGYPCQLGGWI*SRWVKG
Trigger: CCCTTTCACCCATCTTGACAAGATCCAGCCACCCAG...CTGGCATGGGTAACCATCAGAGGAAAAAGCCATGCTCAGCCTTCCAGTTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CAA 90 bp TCTGCAAGCAGGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCCGGATCATATCCTGCTaGGAGGCTGACAGCAGGAGA +
Preference number: 3 (lower is better)
Translates to: SASRTHPQWTGSSSAFSFRIISC*EADSRR
Trigger: TCTCCTGCTGTCAGCCTCCAAGCAGGATATGATCCG...GAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCTGCTTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CAA 90 bp AGCATGGCTTTTTCCTCTGATGGTTACCCATGCCAGGCCCCACCTCTCCATGTCAGCTCCTGCTTCCAGTaGTCTCCCAGAATCACAATC +
Preference number: 3 (lower is better)
Translates to: SMAFSSDGYPCQAPPLHVSSCFQ*SPRITI
Trigger: GATTGTGATTCTGGGAGACAACTGGAAGCAGGAGCT...GACATGGAGAGGTGGGGCCTGGCATGGGTAACCATCAGAGGAAAAAGCCATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CAA 90 bp TTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCAACGACTTGACCAAGTaGAAGGCCACGGGGAACAGT +
Preference number: 3 (lower is better)
Translates to: FQFSIQWWQNKLGWAPVLNDLTK*KATGNS
Trigger: ACTGTTCCCCGTGGCCTTCAACTTGGTCAAGTCGTT...GAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CAA 90 bp GCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATAACGACTTGACCAAGTaGAAGGCCACGGGGAACAGT +
Preference number: 3 (lower is better)
Translates to: APMNGAAAKRTKAKCWQDNDLTK*KATGNS
Trigger: ACTGTTCCCCGTGGCCTTCAACTTGGTCAAGTCGTT...ATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CAA 90 bp AGATGGTTTGCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATATGCCTGGGTGGCTGGATCTaGTCAAGATGGGTGAAAGGG +
Preference number: 3 (lower is better)
Translates to: RWFAVSSSRAPVQTLRICLGGWI*SRWVKG
Trigger: CCCTTTCACCCATCTTGACAAGATCCAGCCACCCAG...GCATATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGCAAACCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR GCA 72 bp TCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATATaGACCCATGAATGGTGCAGCTGCCAAGAGAACCAA +
Preference number: 3 (lower is better)
Translates to: SSSRAPVQTLRI*THEWCSCQENQ
Trigger: TTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGCATATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR-3UTR CAA 90 bp TCTAGATGGTTTGCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATAAGCTCCTGCTTCCAGTaGTCTCCCAGAATCACAATC +
Preference number: 3 (lower is better)
Translates to: SRWFAVSSSRAPVQTLRISSCFQ*SPRITI
Trigger: GATTGTGATTCTGGGAGACAACTGGAAGCAGGAGCT...TATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGCAAACCATCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
3UTR TCA 72 bp CAGAGCACCTGTTCAGACTCTACGTATATGCACCCATaGATGGTGCAGCTGCCAAGAGAACCAAAGCTAAAT +
Preference number: 3 (lower is better)
Translates to: QSTCSDSTYMHP*MVQLPREPKLN
Trigger: ATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGCATATACGTAGAGTCTGAACAGGTGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp GGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCCTCGGCTGCTCATGGTaGCCGCGGGCGCAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: GWAPVLCWNQDPHPAASSLGCSW*PRAQKG
Trigger: GCCTTTCTGCGCCCGCGGGCACCATGAGCAGCCGAG...GCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCCGACTCGGCTGCTCATaGTGCCCGCGGGCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: GWAPVLCWNQDPHPAASSRLGCS*CPRAQK
Trigger: TTTCTGCGCCCGCGGGCACCATGAGCAGCCGAGTCG...GCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp TCCACAGGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGCCAGCGCTTCCTGCTaGTGGGGGCTCAGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: STGPRNHAHPLKLEHQAWASASC*WGLRSP
Trigger: CGGGGACCTGAGCCCCCAGCAGCAGGAAGCGCTGGC...CCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCCTGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCTTGGCCCCTTCCTGCTTaGCCACTGTGCCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: DGPQCSAGTRTLTQLPPAWPLPA*PLCQVS
Trigger: GCTCACCTGGCACAGTGGCCAAGCAGGAAGGGGCCA...AGCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCAGGGTCTCATCGCCTTaGGACTCTGCAGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GWAPVLCWNQDPHPAASSRVSSP*DSAASP
Trigger: AGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCT...GCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp ACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCTCGGCTGCTCATGGTaGCCGCGGGCGCAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: TNLDGPQCSAGTRTLTQLLGCSW*PRAQKG
Trigger: GCCTTTCTGCGCCCGCGGGCACCATGAGCAGCCGAG...CAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCCAGCATTGGGCAGTATaGGCAGCAGGTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GWAPVLCWNQDPHPAASSQHWAV*AAGPGG
Trigger: ACCTCCAGGACCTGCTGCCCATACTGCCCAATGCTG...GCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCTTGGGCTATGCACTGGTaGCCCCTTCCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: DGPQCSAGTRTLTQLPPAWAMHW*PLPAWP
Trigger: TGGCCAAGCAGGAAGGGGCCACCAGTGCATAGCCCA...AGCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCTAGTCATACAGCTGGATaGCCTCAGGGGGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: DGPQCSAGTRTLTQLPPASHTAG*PQGAAM
Trigger: CATGGCAGCCCCCTGAGGTCATCCAGCTGTATGACT...AGCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp TGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCTCGGCTGCTCATGGTaGCCGCGGGCGCAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: WQNKLGWAPVLCWNQDPHLGCSW*PRAQKG
Trigger: GCCTTTCTGCGCCCGCGGGCACCATGAGCAGCCGAG...GTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp TGGGCCTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCCTGGTGGCCCCTTCCTaGTTGGCCACTGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WACPPLLTSYMQRTGLLCLVAPS*LATVPG
Trigger: ACCTGGCACAGTGGCCAAGCAGGAAGGGGCCACCAG...GCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCGGCATGGGTGAGTCCTaGGTGGCTGGATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: GWAPVLCWNQDPHPAASSGMGES*VAGSCQ
Trigger: TTGACAAGATCCAGCCACCCAGGACTCACCCATGCC...GCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GCCTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTGGACAGGAGGTGGGCTaGGGGGACTTGGGTCCTTCG +
Preference number: 4 (lower is better)
Translates to: ACPPLLTSYMQRTGLLCSGQEVG*GDLGPS
Trigger: CGAAGGACCCAAGTCCCCCCAGCCCACCTCCTGTCC...AGAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321205.9
CDS-3UTR TCA 90 bp AGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGCCTGCCCACCCCTGCTaGCCTCCTACATGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RNHAHPLKLEHQAWVSPGPAHPC*PPTCRE
Trigger: TTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGG...CCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp CCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTTGGGCCCCAGTGCTCTaGTGGAACCAGGACCCTCAC +
Preference number: 4 (lower is better)
Translates to: PPEAGTPGMGESWVAGSCWAPVL*WNQDPH
Trigger: GTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCA...ACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp TGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCTGGCTCAGCCTCCCAAACTaGTGGGATTATAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: WAPVLCWNQDPHPAASSWLSLPN*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCAGTTTGGGAGGCTGAG...CCAGCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GATGAAATGGTGACGTGGGACAAGTGGCTCTCTGCAGCCACCTCCAGCACCACCCGACTCGGCTGCTCATaGTGCCCGCGGGCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: DEMVTWDKWLSAATSSTTRLGCS*CPRAQK
Trigger: TTTCTGCGCCCGCGGGCACCATGAGCAGCCGAGTCG...GGTGGTGCTGGAGGTGGCTGCAGAGAGCCACTTGTCCCACGTCACCATTTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp TGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCTGGTGGGTGAGTCCTGGGTaGCTGGATCTTGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: WAPVLCWNQDPHPAASSWWVSPG*LDLVKM
Trigger: CATCTTGACAAGATCCAGCCACCCAGGACTCACCCA...CCAGCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCGCCCCAGTGCTCTGCTaGAACCAGGACCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: AEQTWMGPSALLEPGPSPAPVLC*NQDPHP
Trigger: TGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGC...GGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp TCCACAGGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGCCTGCCCACCCCTGCTaGCCTCCTACATGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: STGPRNHAHPLKLEHQAWPAHPC*PPTCRE
Trigger: TTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGG...CCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCCTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp GGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATGCCAGCGCTTCCTGCTaGTGGGGGCTCAGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: GPILSGLDHLQRSHSQPHASASC*WGLRSP
Trigger: CGGGGACCTGAGCCCCCAGCAGCAGGAAGCGCTGGC...ATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp GTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCGGACAAGTGGCTCTCTaGAGCCACCTCCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: VVAEQTWMGPSALLEPGPGQVAL*SHLQHH
Trigger: GTGGTGCTGGAGGTGGCTGCAGAGAGCCACTTGTCC...GGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTCGACTCGGCTGCTCATaGTGCCCGCGGGCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: AWVSPGWLDLVKMGERAARLGCS*CPRAQK
Trigger: TTTCTGCGCCCGCGGGCACCATGAGCAGCCGAGTCG...AGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp CCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTATGGGCAGCAGGTCCTaGAGGTTCTCCCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PPEAGTPGMGESWVAGSCMGSRS*RFSRNL
Trigger: CAGGTTCCGGGAGAACCTCCAGGACCTGCTGCCCAT...ACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGCAGCATTGGGCAGTATaGGCAGCAGGTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: EPRTPPEAGTPGMGESWVQHWAV*AAGPGG
Trigger: ACCTCCAGGACCTGCTGCCCATACTGCCCAATGCTG...CACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp ACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCCGAGTCATACAGCTaGATGACCTCAGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TNLDGPQCSAGTRTLTQLPESYS*MTSGGC
Trigger: GCAGCCCCCTGAGGTCATCCAGCTGTATGACTCGGG...CAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp TCCACAGGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGACGTGGGACAAGTaGCTCTCTGCAGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: STGPRNHAHPLKLEHQAWVTWDK*LSAATS
Trigger: GGAGGTGGCTGCAGAGAGCCACTTGTCCCACGTCAC...CCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCCTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp TTCAGCATGGGCTATGCACTGGTGGCCCCTTCCTGCTTGGCCACTGTGCCAGGTGTGACGTGGGACAAGTaGCTCTCTGCAGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: FSMGYALVAPSCLATVPGVTWDK*LSAATS
Trigger: GGAGGTGGCTGCAGAGAGCCACTTGTCCCACGTCAC...ACCTGGCACAGTGGCCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCATGGCCCCTTCCTGCTTaGCCACTGTGCCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: VAEQTWMGPSALLEPGPSWPLPA*PLCQVS
Trigger: GCTCACCTGGCACAGTGGCCAAGCAGGAAGGGGCCA...TGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTTCTGGCCCCTTCCTGCTTaGCCACTGTGCCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LPTPADLLHAENRASLLFWPLPA*PLCQVS
Trigger: GCTCACCTGGCACAGTGGCCAAGCAGGAAGGGGCCA...GAAGAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCTTCTGAATCTTCAGCATaGGCTATGCACTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: DGPQCSAGTRTLTQLPPASESSA*AMHWWP
Trigger: GGGCCACCAGTGCATAGCCCATGCTGAAGATTCAGA...AGCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTTCGCCCCAGTGCTCTGCTaGAACCAGGACCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: LPTPADLLHAENRASLLFAPVLC*NQDPHP
Trigger: TGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGC...GAAGAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp TTGAGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCGGGAAGCAGCACCTCCACAAGCGGAGGAGGATCCTaGCCAGCGCTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRLCSVSSEALSGSSTSTSGGGS*PALPAA
Trigger: AGCAGCAGGAAGCGCTGGCCAGGATCCTCCTCCGCT...TGTGGAGGTGCTGCTTCCCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320982.3
CDS-3UTR TCA 90 bp TTGAGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCGGGAAGCAGCACCTCCACAACCACGCACACCCCCTaGAGCTGGAACACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LRLCSVSSEALSGSSTSTTTHTP*SWNTRH
Trigger: ATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGT...TGTGGAGGTGCTGCTTCCCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp AGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTCTGCTCTTCAGGCCTaGAGCTGTGATGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: RNHAHPLKLEHQAWVSPGSALQA*SCDVHR
Trigger: CCTGTGGACATCACAGCTTCAGGCCTGAAGAGCAGA...CCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp TCCACAGGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGCTGGTCCCGAACTCCTaGTCTCAGGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: STGPRNHAHPLKLEHQAWLVPNS*SQVICP
Trigger: TGGGCAGATCACCTGAGATCAGGAGTTCGGGACCAG...CCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCCTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp CATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTGGTCCCCGACTCGGCTaGTCATGGTGCCCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: HPQWTGSSSAFSFSAAFSGPRLG*SWCPRA
Trigger: CGCCCGCGGGCACCATGAGCAGCCGAGTCGGGGACC...AGAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp AGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGCCAGCGCTTCCTGCTaGTGGGGGCTCAGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: SVLILSRILWEQGKRFLSASASC*WGLRSP
Trigger: CGGGGACCTGAGCCCCCAGCAGCAGGAAGCGCTGGC...AGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp CACTCAACTGGAAGGCTGAGCATGGCTTTTTCCTCTGATGGTTACCCATGCCAGGCCAGCGCTTCCTGCTaGTGGGGGCTCAGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: HSTGRLSMAFSSDGYPCQASASC*WGLRSP
Trigger: CGGGGACCTGAGCCCCCAGCAGCAGGAAGCGCTGGC...CTGGCATGGGTAACCATCAGAGGAAAAAGCCATGCTCAGCCTTCCAGTTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp GGTAGAGGTGGCTGGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCCTTGAGAGGACAAGTGGCTCTCTaGAGCCACCTCCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: GRGGWGLHCVGEGLIALRGQVAL*SHLQHH
Trigger: GTGGTGCTGGAGGTGGCTGCAGAGAGCCACTTGTCC...TCTCAAGGCGATGAGACCCTCCCCAACACAGTGAAGACCCCAGCCACCTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp CCTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGCTGGTGGCCCCTTCCTaGTTGGCCACTGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGWLDLVKMGERAASASRLVAPS*LATVPG
Trigger: ACCTGGCACAGTGGCCAAGCAGGAAGGGGCCACCAG...CCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp GGGTCTCATCGCCTTGAGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCGGGAAGCTTCAGCATGGGCTATaGACTGGTGGCCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GSHRLETLQRLLRGLVGKLQHGL*TGGPFL
Trigger: CAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAAG...CTTCCCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp GTGGAGGGGAGGTCACTGGGAATTCCCTGGAGACTCAGTCGTTACCCACTCAACTGGGCCCCAGTGCTCTaGTGGAACCAGGACCCTCAC +
Preference number: 4 (lower is better)
Translates to: VEGRSLGIPWRLSRYPLNWAPVL*WNQDPH
Trigger: GTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCA...GTTGAGTGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp TGCACAGGTAGAGGTGGCTGGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCCTTGCCCAGGCTGGAGTaGAGTGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CTGRGGWGLHCVGEGLIALPRLE*SGTISA
Trigger: AGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCAA...GGCGATGAGACCCTCCCCAACACAGTGAAGACCCCAGCCACCTCTACCTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp CCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTTTGCCCAGGCTGGAGTaGAGTGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PPEAGTPGMGESWVAGSCLPRLE*SGTISA
Trigger: AGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCAA...ACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp GCCTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTTTCCGGAACTCCATGTaGCAGGCTCTCAGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: ACPPLLTSYMQRTGLLCSFRNSM*QALRAW
Trigger: CCACGCTCTGAGAGCCTGGCACATGGAGTTCCGGAA...AGAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321205.9
CDS-3UTR CCA 90 bp GGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCGGTTCTCCCGGAACCTaGCCAGCGCTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGWILSRWVKGQLLQAGPGSPGT*PALPAA
Trigger: AGCAGCAGGAAGCGCTGGCCAGGTTCCGGGAGAACC...GGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGGGGTCTTCACTGTGTTaGGGAGGGTCTCATCGCCTT +
Preference number: 4 (lower is better)
Translates to: EPRTPPEAGTPGMGESWVGSSLC*GGSHRL
Trigger: AAGGCGATGAGACCCTCCCCAACACAGTGAAGACCC...CACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GTCGAGGGACCCAATGATGTTGAAGTACACAGGGCAGCCTTCGTAGTCGTAGCCCAGCACCACCCTGCCTaGGAAGGCAGGGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VEGPNDVEVHRAAFVVVAQHHPA*EGRGQR
Trigger: CCTCTGACCCCTGCCTTCCCAGGCAGGGTGGTGCTG...GGCTACGACTACGAAGGCTGCCCTGTGTACTTCAACATCATTGGGTCCCTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCAGCATGGGCTATGCACTaGTGGCCCCTTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VAEQTWMGPSALLEPGPSAWAMH*WPLPAW
Trigger: CCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGC...TGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTTCGCATGGGCTATGCACTaGTGGCCCCTTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPTPADLLHAENRASLLFAWAMH*WPLPAW
Trigger: CCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGC...GAAGAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
3UTR CAA 72 bp TGGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCCTaGAGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: WGLHCVGEGLIA*RLCSVSSEALS
Trigger: CGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCTCCCCAACACAGTGAAGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GATGAAATGGTGACGTGGGACAAGTGGCTCTCTGCAGCCACCTCCAGCACCACCAGGGTCTCATCGCCTTaGGACTCTGCAGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: DEMVTWDKWLSAATSSTTRVSSP*DSAASP
Trigger: AGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCT...GGTGGTGCTGGAGGTGGCTGCAGAGAGCCACTTGTCCCACGTCACCATTTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp CATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAACCACGCACACCCCCTaGAGCTGGAACACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: HPVVAEQTWMGPSALLEPTTHTP*SWNTRH
Trigger: ATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGT...TGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp GGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCACCACGCACACCCCCTaGAGCTGGAACACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GWLDLVKMGERAASASRTTTHTP*SWNTRH
Trigger: ATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGT...GGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp TCCACAGGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGTCAGGCCTGAAGCTGTaGTGTCCACAGGACCTAGGA +
Preference number: 4 (lower is better)
Translates to: STGPRNHAHPLKLEHQAWSGLKL*CPQDLG
Trigger: TCCTAGGTCCTGTGGACATCACAGCTTCAGGCCTGA...CCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCCTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp GCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCTCAGGCCTGAAGCTGTaGTGTCCACAGGACCTAGGA +
Preference number: 4 (lower is better)
Translates to: AEQTWMGPSALLEPGPSPSGLKL*CPQDLG
Trigger: TCCTAGGTCCTGTGGACATCACAGCTTCAGGCCTGA...GGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp GGCCTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTTCCGGATCATATCCTaGTTGGAGGCTGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GLPTPADLLHAENRASLLFRIIS*LEADSR
Trigger: CCTGCTGTCAGCCTCCAAGCAGGATATGATCCGGAA...GAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp AGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTTCCGGATCATATCCTaGTTGGAGGCTGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: RNHAHPLKLEHQAWVSPGFRIIS*LEADSR
Trigger: CCTGCTGTCAGCCTCCAAGCAGGATATGATCCGGAA...CCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp GGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCATCTGAAGCAAACTaGCACCTGAGCACACAGCCC +
Preference number: 4 (lower is better)
Translates to: GPRNHAHPLKLEHQAWVSPSEAN*HLSTQP
Trigger: GGGCTGTGTGCTCAGGTGGCAGTTTGCTTCAGATGG...ACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp GCCTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTCCATCTGAAGCAAACTaGCACCTGAGCACACAGCCC +
Preference number: 4 (lower is better)
Translates to: ACPPLLTSYMQRTGLLCSPSEAN*HLSTQP
Trigger: GGGCTGTGTGCTCAGGTGGCAGTTTGCTTCAGATGG...AGAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp CTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTTCATCGCCTTGAGACTCTaGAGCGTCTCCTCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LPTPADLLHAENRASLLFIALRL*SVSSEA
Trigger: GGCCTCTGAGGAGACGCTGCAGAGTCTCAAGGCGAT...GAAGAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp TCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGATCGCCTTGAGACTCTaGAGCGTCTCCTCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SSGGRTNLDGPQCSAGTRIALRL*SVSSEA
Trigger: GGCCTCTGAGGAGACGCTGCAGAGTCTCAAGGCGAT...CCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp AAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAAGATGCTGGTGGCCCCTTCCTaGTTGGCCACTGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KLEHQAWVSPGWLDLVKMLVAPS*LATVPG
Trigger: ACCTGGCACAGTGGCCAAGCAGGAAGGGGCCACCAG...CATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp AGGGCTTCTCTGCTCTTCAGGCCTGAAGCTGTGATGTCCACAGGACCTAGGAACTGGGCCCCAGTGCTCTaGTGGAACCAGGACCCTCAC +
Preference number: 4 (lower is better)
Translates to: RASLLFRPEAVMSTGPRNWAPVL*WNQDPH
Trigger: GTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCA...GTTCCTAGGTCCTGTGGACATCACAGCTTCAGGCCTGAAGAGCAGAGAAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp TGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACTTGCCCAGGCTGGAGTaGAGTGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WQNKLGWAPVLCWNQDPHLPRLE*SGTISA
Trigger: AGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCAA...GTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCACCCGAGTCATACAGCTaGATGACCTCAGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HPVVAEQTWMGPSALLEPPESYS*MTSGGC
Trigger: GCAGCCCCCTGAGGTCATCCAGCTGTATGACTCGGG...TGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp ACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGACAGGTAGAGGTGGCTaGGGTCTTCACTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: TNLDGPQCSAGTRTLTQLTGRGG*GLHCVG
Trigger: CCCAACACAGTGAAGACCCCAGCCACCTCTACCTGT...CAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp TGCACAGGTAGAGGTGGCTGGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCCACAGGTAGAGGTGGCTaGGGTCTTCACTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: CTGRGGWGLHCVGEGLIATGRGG*GLHCVG
Trigger: CCCAACACAGTGAAGACCCCAGCCACCTCTACCTGT...GGCGATGAGACCCTCCCCAACACAGTGAAGACCCCAGCCACCTCTACCTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCCAGCACCACCCTGCCTaGGAAGGCAGGGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QFSIQWWQNKLGWAPVLCQHHPA*EGRGQR
Trigger: CCTCTGACCCCTGCCTTCCCAGGCAGGGTGGTGCTG...GCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCTGGGCTATGCACTGGTaGCCCCTTCCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGWILSRWVKGQLLQAGPWAMHW*PLPAWP
Trigger: TGGCCAAGCAGGAAGGGGCCACCAGTGCATAGCCCA...GGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp TTCAGCATGGGCTATGCACTGGTGGCCCCTTCCTGCTTGGCCACTGTGCCAGGTTGGAGGGGAGGTCACTaGGAATTCCCTGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: FSMGYALVAPSCLATVPGWRGGH*EFPGDS
Trigger: TGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCCA...ACCTGGCACAGTGGCCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp TCCACAGGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGTTCCTGCCCAGCTTCTaGGTTTGCAGCTCACACTCA +
Preference number: 4 (lower is better)
Translates to: STGPRNHAHPLKLEHQAWFLPSF*VCSSHS
Trigger: TGAGTGTGAGCTGCAAACTCAGAAGCTGGGCAGGAA...CCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCCTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp GTGAAGGGGTTGGAGTGCACAGGTAGAGGTGGCTGGGGTCTTCACTGTGTTGGGCCTCCACAGTGTAGCTaGGCTTCTTGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: VKGLECTGRGGWGLHCVGPPQCS*ASWHAS
Trigger: GGATGCATGCCAAGAAGCTCAGCTACACTGTGGAGG...CCCAACACAGTGAAGACCCCAGCCACCTCTACCTGTGCACTCCAACCCCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GGCCTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTCTTGTCAAGATGGGTaGAAGGGCAGCTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GLPTPADLLHAENRASLLSCQDG*KGSFCK
Trigger: CTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGA...GAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp TGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACTCAGGCCTGAAGCTGTaGTGTCCACAGGACCTAGGA +
Preference number: 4 (lower is better)
Translates to: WQNKLGWAPVLCWNQDPHSGLKL*CPQDLG
Trigger: TCCTAGGTCCTGTGGACATCACAGCTTCAGGCCTGA...GTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp GGCCTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCACGTATATGCACCCATaGATGGTGCAGCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GLPTPADLLHAENRASLLTYMHP*MVQLPR
Trigger: TCTTGGCAGCTGCACCATTCATGGGTGCATATACGT...GAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GCAGAGCACCTGTTCAGACTCTACGTATATGCACCCATGAATGGTGCAGCTGCCAGGTTCTCCCGGAACTaGGCGGAGGAGGATCCTGGC +
Preference number: 4 (lower is better)
Translates to: AEHLFRLYVYAPMNGAAARFSRN*AEEDPG
Trigger: GCCAGGATCCTCCTCCGCTCAGTTCCGGGAGAACCT...GGCAGCTGCACCATTCATGGGTGCATATACGTAGAGTCTGAACAGGTGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320982.3
CDS-3UTR GCA 90 bp GCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCATGACCTCAGGGGGCTaGCATGTGACAATGTTGTCC +
Preference number: 4 (lower is better)
Translates to: AEQTWMGPSALLEPGPSPMTSGG*HVTMLS
Trigger: GGACAACATTGTCACATGGCAGCCCCCTGAGGTCAT...GGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp GGGTCTCATCGCCTTGAGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCGGGAAGTTCCGGATCATATCCTaGTTGGAGGCTGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GSHRLETLQRLLRGLVGKFRIIS*LEADSR
Trigger: CCTGCTGTCAGCCTCCAAGCAGGATATGATCCGGAA...CTTCCCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp GTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCATCTGAAGCAAACTaGCACCTGAGCACACAGCCC +
Preference number: 4 (lower is better)
Translates to: VAEQTWMGPSALLEPGPSPSEAN*HLSTQP
Trigger: GGGCTGTGTGCTCAGGTGGCAGTTTGCTTCAGATGG...TGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp TTTCCTCTGATGGTTACCCATGCCAGGCCCCACCTCTCCATGTCCAATGTTCTTCGACTCGGCTGCTCATaGTGCCCGCGGGCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FPLMVTHARPHLSMSNVLRLGCS*CPRAQK
Trigger: TTTCTGCGCCCGCGGGCACCATGAGCAGCCGAGTCG...AAGAACATTGGACATGGAGAGGTGGGGCCTGGCATGGGTAACCATCAGAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp AGCATGGCTTTTTCCTCTGATGGTTACCCATGCCAGGCCCCACCTCTCCATGTCCCCGAGTCATACAGCTaGATGACCTCAGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SMAFSSDGYPCQAPPLHVPESYS*MTSGGC
Trigger: GCAGCCCCCTGAGGTCATCCAGCTGTATGACTCGGG...GACATGGAGAGGTGGGGCCTGGCATGGGTAACCATCAGAGGAAAAAGCCATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTGGATCATATCCTGCTTaGAGGCTGACAGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PPEAGTPGMGESWVAGSCGSYPA*RLTAGD
Trigger: GTCTCCTGCTGTCAGCCTCCAAGCAGGATATGATCC...ACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTGTAGACCTCCACAGCTaGCTTCCACAGGTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: GPRNHAHPLKLEHQAWVSVDLHS*LPQVFQ
Trigger: CTGAAACACCTGTGGAAGCCAGCTGTGGAGGTCTAC...ACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp CCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCCAGCACCACCCTGCCTaGGAAGGCAGGGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PSSVDWIIFSVLILSRILQHHPA*EGRGQR
Trigger: CCTCTGACCCCTGCCTTCCCAGGCAGGGTGGTGCTG...GAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCAGGACCCATCCTCAGTaGACTGGATCATCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: VVAEQTWMGPSALLEPGPRTHPQ*TGSSSA
Trigger: CGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCT...GGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTTGGGTGAGTCCTGGGTaGCTGGATCTTGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: GPRNHAHPLKLEHQAWVSWVSPG*LDLVKM
Trigger: CATCTTGACAAGATCCAGCCACCCAGGACTCACCCA...ACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp TGCACAGGTAGAGGTGGCTGGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCCTGGGTGAGTCCTGGGTaGCTGGATCTTGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: CTGRGGWGLHCVGEGLIAWVSPG*LDLVKM
Trigger: CATCTTGACAAGATCCAGCCACCCAGGACTCACCCA...GGCGATGAGACCCTCCCCAACACAGTGAAGACCCCAGCCACCTCTACCTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCAGGCATGGGTGAGTCCTaGGTGGCTGGATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: VAEQTWMGPSALLEPGPSGMGES*VAGSCQ
Trigger: TTGACAAGATCCAGCCACCCAGGACTCACCCATGCC...TGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp AGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCGGCATGGGTGAGTCCTaGGTGGCTGGATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: SGGRTNLDGPQCSAGTRTGMGES*VAGSCQ
Trigger: TTGACAAGATCCAGCCACCCAGGACTCACCCATGCC...GGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GATGAAATGGTGACGTGGGACAAGTGGCTCTCTGCAGCCACCTCCAGCACCACCCAGAACAAACTTGGATaGGCCCCAGTGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DEMVTWDKWLSAATSSTTQNKLG*APVLCW
Trigger: CCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTG...GGTGGTGCTGGAGGTGGCTGCAGAGAGCCACTTGTCCCACGTCACCATTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp TTGAGACTCTGCAGCGTCTCCTCAGAGGCCTTGTCGGGAAGCAGCACCTCCACACAGAACAAACTTGGATaGGCCCCAGTGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LRLCSVSSEALSGSSTSTQNKLG*APVLCW
Trigger: CCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTG...TGTGGAGGTGCTGCTTCCCGACAAGGCCTCTGAGGAGACGCTGCAGAGTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp TGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCAGAACAAACTTGGATaGGCCCCAGTGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WWQNKLGWAPVLCWNQDPQNKLG*APVLCW
Trigger: CCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTG...AGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp GCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCGCAGCTCACAGACTTTaGTGCGCTTCCGGATCATAT +
Preference number: 4 (lower is better)
Translates to: AEQTWMGPSALLEPGPSPAAHRL*CASGSY
Trigger: ATATGATCCGGAAGCGCATCAAAGTCTGTGAGCTGC...GGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp AGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCTTCCTGCCCAGCTTCTaGGTTTGCAGCTCACACTCA +
Preference number: 4 (lower is better)
Translates to: SGGRTNLDGPQCSAGTRTFLPSF*VCSSHS
Trigger: TGAGTGTGAGCTGCAAACTCAGAAGCTGGGCAGGAA...GGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp GGCCTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCAATGAGATGAAATGGTaGCGTGGGACAAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GLPTPADLLHAENRASLLNEMKW*RGTSGS
Trigger: AGAGCCACTTGTCCCACGTCACCATTTCATCTCATT...GAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCAGGTGAGCCTACAATaGGATGAAATGGTGACGTGG +
Preference number: 4 (lower is better)
Translates to: GPRNHAHPLKLEHQAWVSQVSLQ*DEMVTW
Trigger: CCACGTCACCATTTCATCTCATTGTAGGCTCACCTG...ACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGACCACGCACACCCCCTaGAGCTGGAACACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GLDHLQRSHSQPHSLGTGTTHTP*SWNTRH
Trigger: ATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGT...CCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp CATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCATCAGGCCTGAAGCTGTaGTGTCCACAGGACCTAGGA +
Preference number: 4 (lower is better)
Translates to: HPVVAEQTWMGPSALLEPSGLKL*CPQDLG
Trigger: TCCTAGGTCCTGTGGACATCACAGCTTCAGGCCTGA...TGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp GGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCTCTGCTCTTCAGGCCTaGAGCTGTGATGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: GGWILSRWVKGQLLQAGPSALQA*SCDVHR
Trigger: CCTGTGGACATCACAGCTTCAGGCCTGAAGAGCAGA...GGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp GGAGGGGAGGTCACTGGGAATTCCCTGGAGACTCAGTCGTTACCCACTCAACTGTCTGCTCTTCAGGCCTaGAGCTGTGATGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: GGEVTGNSLETQSLPTQLSALQA*SCDVHR
Trigger: CCTGTGGACATCACAGCTTCAGGCCTGAAGAGCAGA...CAGTTGAGTGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp CCTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGTCTGCTCTTCAGGCCTaGAGCTGTGATGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: PGWLDLVKMGERAASASRSALQA*SCDVHR
Trigger: CCTGTGGACATCACAGCTTCAGGCCTGAAGAGCAGA...CCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp TCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGCATGGCTTTTTCCTCTaGTGGTTACCCATGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSGGRTNLDGPQCSAGTRHGFFL*WLPMPG
Trigger: GCCTGGCATGGGTAACCATCAGAGGAAAAAGCCATG...CCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp CATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCACCATCTGAAGCAAACTaGCACCTGAGCACACAGCCC +
Preference number: 4 (lower is better)
Translates to: HPVVAEQTWMGPSALLEPPSEAN*HLSTQP
Trigger: GGGCTGTGTGCTCAGGTGGCAGTTTGCTTCAGATGG...TGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp AATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTTGGGCCCCAGTGCTCTaGTGGAACCAGGACCCTCAC +
Preference number: 4 (lower is better)
Translates to: NFPSSGGRTNLDGPQCSAWAPVL*WNQDPH
Trigger: GTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCA...AGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp CCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAGTTGGAACAGGAATaGCTCGTGGCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: PPEAGTPGMGESWVAGSCQLEQE*LVALAL
Trigger: TAAAGCCAGTGCCACGAGGCATTCCTGTTCCAACTG...ACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp CCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGTGGCCTTGTATCCGCTaGCGCCTGGTTGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PIFHPVVAEQTWMGPSALWPCIR*RLVVPP
Trigger: AGGAGGCACAACCAGGCGGCAGCGGATACAAGGCCA...CAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATAGCGCTTCCTGCTGCTaGGGGCTCAGGTCCCCGACT +
Preference number: 4 (lower is better)
Translates to: APMNGAAAKRTKAKCWQDSASCC*GLRSPT
Trigger: AGTCGGGGACCTGAGCCCCCAGCAGCAGGAAGCGCT...ATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCGGTTCTCCCGGAACCTaGCCAGCGCTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSSVDWIIFSVLILSRILGSPGT*PALPAA
Trigger: AGCAGCAGGAAGCGCTGGCCAGGTTCCGGGAGAACC...GAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255858.12
ENST00000321205.9
CDS-3UTR CCA 90 bp AAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAAGATGCAGCATTGGGCAGTATaGGCAGCAGGTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: KLEHQAWVSPGWLDLVKMQHWAV*AAGPGG
Trigger: ACCTCCAGGACCTGCTGCCCATACTGCCCAATGCTG...CATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTGGGCTATGCACTGGTaGCCCCTTCCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GPILSGLDHLQRSHSQPHWAMHW*PLPAWP
Trigger: TGGCCAAGCAGGAAGGGGCCACCAGTGCATAGCCCA...ATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GATGAAATGGTGACGTGGGACAAGTGGCTCTCTGCAGCCACCTCCAGCACCACCTGGGTGAGTCCTGGGTaGCTGGATCTTGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: DEMVTWDKWLSAATSSTTWVSPG*LDLVKM
Trigger: CATCTTGACAAGATCCAGCCACCCAGGACTCACCCA...GGTGGTGCTGGAGGTGGCTGCAGAGAGCCACTTGTCCCACGTCACCATTTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCGTGGCAGAACAAACTTaGATGGGCCCCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GGWILSRWVKGQLLQAGPVAEQT*MGPSAL
Trigger: CAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC...GGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTGTGGCAGAACAAACTTaGATGGGCCCCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AWVSPGWLDLVKMGERAAVAEQT*MGPSAL
Trigger: CAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC...AGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCTGGAGGGGAGGTCACTaGGAATTCCCTGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: GWLDLVKMGERAASASRTWRGGH*EFPGDS
Trigger: TGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCCA...GGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATAGTCATACAGCTGGATaGCCTCAGGGGGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: GPILSGLDHLQRSHSQPHSHTAG*PQGAAM
Trigger: CATGGCAGCCCCCTGAGGTCATCCAGCTGTATGACT...ATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp CCTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGTTCCTGCCCAGCTTCTaGGTTTGCAGCTCACACTCA +
Preference number: 4 (lower is better)
Translates to: PGWLDLVKMGERAASASRFLPSF*VCSSHS
Trigger: TGAGTGTGAGCTGCAAACTCAGAAGCTGGGCAGGAA...CCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp CTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCTCCACAGTGTAGCTaGGCTTCTTGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: LGGWILSRWVKGQLLQAGPPQCS*ASWHAS
Trigger: GGATGCATGCCAAGAAGCTCAGCTACACTGTGGAGG...TCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp CAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCAGGGTCTCATCGCCTTaGGACTCTGCAGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QRSHSQPHSLGTGKEVPVRVSSP*DSAASP
Trigger: AGGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCT...GACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GCCTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTAATGAGATGAAATGGTaGCGTGGGACAAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: ACPPLLTSYMQRTGLLCSNEMKW*RGTSGS
Trigger: AGAGCCACTTGTCCCACGTCACCATTTCATCTCATT...AGAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCATCTTGTCAAGATGGGTaGAAGGGCAGCTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: VAEQTWMGPSALLEPGPSSCQDG*KGSFCK
Trigger: CTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGA...TGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp AATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTCCTGCCCACCCCTGCTaGCCTCCTACATGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: NFPSSGGRTNLDGPQCSAPAHPC*PPTCRE
Trigger: TTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGG...AGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp GGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCATCGCAGGACATCTGCAGTaGTGGAGAGGTGATCAGGGA +
Preference number: 4 (lower is better)
Translates to: GWILSRWVKGQLLQAGPIAGHLQ*WRGDQG
Trigger: TCCCTGATCACCTCTCCATCACTGCAGATGTCCTGC...GATGGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320982.3
CDS-3UTR GCA 90 bp AGATGGTTTGCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATATGCCTCGGCTGCTCATGGTaGCCGCGGGCGCAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: RWFAVSSSRAPVQTLRICLGCSW*PRAQKG
Trigger: GCCTTTCTGCGCCCGCGGGCACCATGAGCAGCCGAG...GCATATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGCAAACCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp CCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAAATGACCTCAGGGGGCTaGCATGTGACAATGTTGTCC +
Preference number: 4 (lower is better)
Translates to: PEAGTPGMGESWVAGSCQMTSGG*HVTMLS
Trigger: GGACAACATTGTCACATGGCAGCCCCCTGAGGTCAT...TTGACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp TGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCATCTCGATCTTCCTaGCCAGCTTCTGAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: WQNKLGWAPVLCWNQDPHPSRSS*PASEFA
Trigger: TGCAAACTCAGAAGCTGGGCAGGAAGATCGAGATGG...GTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp GTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCATCTCGATCTTCCTaGCCAGCTTCTGAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: VAEQTWMGPSALLEPGPSPSRSS*PASEFA
Trigger: TGCAAACTCAGAAGCTGGGCAGGAAGATCGAGATGG...TGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp ATCTGCTCAAACACCCAGTTGGAACAGGAATGCCTCGTGGCACTGGCTTTAGGAGGACAAGTGGCTCTCTaGAGCCACCTCCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: ICSNTQLEQECLVALALGGQVAL*SHLQHH
Trigger: GTGGTGCTGGAGGTGGCTGCAGAGAGCCACTTGTCC...TCCTAAAGCCAGTGCCACGAGGCATTCCTGTTCCAACTGGGTGTTTGAGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp CCTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGCTCAGCCTCCCAAACTaGTGGGATTATAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PGWLDLVKMGERAASASRLSLPN*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCAGTTTGGGAGGCTGAG...CCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp AGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCTGCACCCATGAATGGTaGAGCTGCCAAGAGAACCAA +
Preference number: 4 (lower is better)
Translates to: SGGRTNLDGPQCSAGTRTCTHEW*SCQENQ
Trigger: TTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGCA...GGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp GACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTTGGCCTTGTATCCGCTaGCGCCTGGTTGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: DPSSVDWIIFSVLILSRIWPCIR*RLVVPP
Trigger: AGGAGGCACAACCAGGCGGCAGCGGATACAAGGCCA...AATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTGGTTCTCCCGGAACCTaGCCAGCGCTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HPQWTGSSSAFSFSAAFSGSPGT*PALPAA
Trigger: AGCAGCAGGAAGCGCTGGCCAGGTTCCGGGAGAACC...AGAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255858.12
ENST00000321205.9
CDS-3UTR CCA 90 bp CTTCTGCAAGCAGGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATATGGGCAGCAGGTCCTaGAGGTTCTCCCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: LLQAGPILSGLDHLQRSHMGSRS*RFSRNL
Trigger: CAGGTTCCGGGAGAACCTCCAGGACCTGCTGCCCAT...ATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCTGCTTGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp TCTGCAAGCAGGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCCCCGAGTCATACAGCTaGATGACCTCAGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SASRTHPQWTGSSSAFSFPESYS*MTSGGC
Trigger: GCAGCCCCCTGAGGTCATCCAGCTGTATGACTCGGG...GAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCTGCTTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp CTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCTTCGATGAAATGGTGACGTaGGACAAGTGGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LPTPADLLHAENRASLLFDEMVT*DKWLSA
Trigger: TGCAGAGAGCCACTTGTCCCACGTCACCATTTCATC...GAAGAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp TTTCCTCTGATGGTTACCCATGCCAGGCCCCACCTCTCCATGTCCAATGTTCTTGCATGGGCTATGCACTaGTGGCCCCTTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: FPLMVTHARPHLSMSNVLAWAMH*WPLPAW
Trigger: CCAAGCAGGAAGGGGCCACCAGTGCATAGCCCATGC...AAGAACATTGGACATGGAGAGGTGGGGCCTGGCATGGGTAACCATCAGAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GGAGGGGAGGTCACTGGGAATTCCCTGGAGACTCAGTCGTTACCCACTCAACTGTCTGAATCTTCAGCATaGGCTATGCACTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GGEVTGNSLETQSLPTQLSESSA*AMHWWP
Trigger: GGGCCACCAGTGCATAGCCCATGCTGAAGATTCAGA...CAGTTGAGTGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GTGGAGGGGAGGTCACTGGGAATTCCCTGGAGACTCAGTCGTTACCCACTCAACAGGACCCATCCTCAGTaGACTGGATCATCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: VEGRSLGIPWRLSRYPLNRTHPQ*TGSSSA
Trigger: CGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCT...GTTGAGTGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATGCCCCAGTGCTCTGCTaGAACCAGGACCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: APMNGAAAKRTKAKCWQDAPVLC*NQDPHP
Trigger: TGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGC...ATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTGCCCCAGTGCTCTGCTaGAACCAGGACCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: HPQWTGSSSAFSFSAAFSAPVLC*NQDPHP
Trigger: TGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGC...AGAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCATCCAGAACAAACTTGGATaGGCCCCAGTGCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GWILSRWVKGQLLQAGPIQNKLG*APVLCW
Trigger: CCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTG...GATGGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGTTTTCCATCCAGTGGTaGCAGAACAAACTTGGATGG +
Preference number: 4 (lower is better)
Translates to: EPRTPPEAGTPGMGESWVFSIQW*QNKLGW
Trigger: CCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAA...CACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp TGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCGTTACCCACTCAACTaGAAGGCTGAGCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: WQNKLGWAPVLCWNQDPHRYPLN*KAEHGF
Trigger: AAAGCCATGCTCAGCCTTCCAGTTGAGTGGGTAACG...GTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCATCACTGGGAATTCCCTaGAGACTCAGTCGTTACCCA +
Preference number: 4 (lower is better)
Translates to: VAEQTWMGPSALLEPGPSSLGIP*RLSRYP
Trigger: TGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGA...TGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GTGAAGGGGTTGGAGTGCACAGGTAGAGGTGGCTGGGGTCTTCACTGTGTTGGGTCACTGGGAATTCCCTaGAGACTCAGTCGTTACCCA +
Preference number: 4 (lower is better)
Translates to: VKGLECTGRGGWGLHCVGSLGIP*RLSRYP
Trigger: TGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGA...CCCAACACAGTGAAGACCCCAGCCACCTCTACCTGTGCACTCCAACCCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp TCTGCAAGCAGGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCAGTCATACAGCTGGATaGCCTCAGGGGGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: SASRTHPQWTGSSSAFSFSHTAG*PQGAAM
Trigger: CATGGCAGCCCCCTGAGGTCATCCAGCTGTATGACT...GAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCTGCTTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp GTGGAGGGGAGGTCACTGGGAATTCCCTGGAGACTCAGTCGTTACCCACTCAACCAGGTGAGCCTACAATaGGATGAAATGGTGACGTGG +
Preference number: 4 (lower is better)
Translates to: VEGRSLGIPWRLSRYPLNQVSLQ*DEMVTW
Trigger: CCACGTCACCATTTCATCTCATTGTAGGCTCACCTG...GTTGAGTGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp CCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCCTGGTCCCGAACTCCTaGTCTCAGGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PSSVDWIIFSVLILSRILLVPNS*SQVICP
Trigger: TGGGCAGATCACCTGAGATCAGGAGTTCGGGACCAG...GAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTACGTATATGCACCCATaGATGGTGCAGCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: AWVSPGWLDLVKMGERAATYMHP*MVQLPR
Trigger: TCTTGGCAGCTGCACCATTCATGGGTGCATATACGT...AGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp TCTGCAAGCAGGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCATCGCCTTGAGACTCTaGAGCGTCTCCTCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SASRTHPQWTGSSSAFSFIALRL*SVSSEA
Trigger: GGCCTCTGAGGAGACGCTGCAGAGTCTCAAGGCGAT...GAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCTGCTTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp CCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAATGCACCCATGAATGGTaGAGCTGCCAAGAGAACCAA +
Preference number: 4 (lower is better)
Translates to: PEAGTPGMGESWVAGSCQCTHEW*SCQENQ
Trigger: TTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGCA...TTGACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp AGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCAGACTCTACGTATATaGACCCATGAATGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SGGRTNLDGPQCSAGTRTQTLRI*THEWCS
Trigger: GCTGCACCATTCATGGGTGCATATACGTAGAGTCTG...GGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CTTCTGCAAGCAGGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATCAGCATTGGGCAGTATaGGCAGCAGGTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LLQAGPILSGLDHLQRSHQHWAV*AAGPGG
Trigger: ACCTCCAGGACCTGCTGCCCATACTGCCCAATGCTG...ATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCTGCTTGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCATCGGATCATATCCTGCTTaGAGGCTGACAGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GWILSRWVKGQLLQAGPIGSYPA*RLTAGD
Trigger: GTCTCCTGCTGTCAGCCTCCAAGCAGGATATGATCC...GATGGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp AGGGCTTCTCTGCTCTTCAGGCCTGAAGCTGTGATGTCCACAGGACCTAGGAACGTAGACCTCCACAGCTaGCTTCCACAGGTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RASLLFRPEAVMSTGPRNVDLHS*LPQVFQ
Trigger: CTGAAACACCTGTGGAAGCCAGCTGTGGAGGTCTAC...GTTCCTAGGTCCTGTGGACATCACAGCTTCAGGCCTGAAGAGCAGAGAAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGGGGTCTTCACTGTGTTaGGGAGGGTCTCATCGCCTT +
Preference number: 4 (lower is better)
Translates to: AFSFSAAFSGNRERGSCLGSSLC*GGSHRL
Trigger: AAGGCGATGAGACCCTCCCCAACACAGTGAAGACCC...CAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCACAGGTAGAGGTGGCTaGGGTCTTCACTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: QRSHSQPHSLGTGKEVPVTGRGG*GLHCVG
Trigger: CCCAACACAGTGAAGACCCCAGCCACCTCTACCTGT...GACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTGTGACGTGGGACAAGTaGCTCTCTGCAGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: HPQWTGSSSAFSFSAAFSVTWDK*LSAATS
Trigger: GGAGGTGGCTGCAGAGAGCCACTTGTCCCACGTCAC...AGAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTTTTCCATCCAGTGGTaGCAGAACAAACTTGGATGG +
Preference number: 4 (lower is better)
Translates to: VVAEQTWMGPSALLEPGPFSIQW*QNKLGW
Trigger: CCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAA...GGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp TGCACAGGTAGAGGTGGCTGGGGTCTTCACTGTGTTGGGGAGGGTCTCATCGCCACCAAAGCTAAATGTTaGCAGGATCACAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: CTGRGGWGLHCVGEGLIATKAKC*QDHSRC
Trigger: ACACCTGCTGTGATCCTGCCAACATTTAGCTTTGGT...GGCGATGAGACCCTCCCCAACACAGTGAAGACCCCAGCCACCTCTACCTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp CCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGTTCCTGCCCAGCTTCTaGGTTTGCAGCTCACACTCA +
Preference number: 4 (lower is better)
Translates to: PIFHPVVAEQTWMGPSALFLPSF*VCSSHS
Trigger: TGAGTGTGAGCTGCAAACTCAGAAGCTGGGCAGGAA...CAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp AATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTCCTCCACAGTGTAGCTaGGCTTCTTGGCATGCATCC +
Preference number: 4 (lower is better)
Translates to: NFPSSGGRTNLDGPQCSAPPQCS*ASWHAS
Trigger: GGATGCATGCCAAGAAGCTCAGCTACACTGTGGAGG...AGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp TGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACAAAGAGGTTCCTGTCTaGATCTTCAGCATGGGCTAT +
Preference number: 4 (lower is better)
Translates to: WQNKLGWAPVLCWNQDPHKEVPV*IFSMGY
Trigger: ATAGCCCATGCTGAAGATTCAGACAGGAACCTCTTT...GTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp TTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGAATCCTGCCCACCCCTGCTaGCCTCCTACATGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: FSFSAAFSGNRERGSCLNPAHPC*PPTCRE
Trigger: TTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGG...ATTCAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp ATTTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCCTGGTCCCGAACTCCTaGTCTCAGGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ISNFPSSGGRTNLDGPQCLVPNS*SQVICP
Trigger: TGGGCAGATCACCTGAGATCAGGAGTTCGGGACCAG...GCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp TCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGAATCTTCAGCATGCAGTGATGGAGAGGTaGTCAGGGAGCACAAACCCC +
Preference number: 4 (lower is better)
Translates to: SAAFSGNRERGSCLNLQHAVMER*SGSTNP
Trigger: GGGGTTTGTGCTCCCTGATCACCTCTCCATCACTGC...ATGCTGAAGATTCAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320982.3
CDS-3UTR GCA 90 bp AGGGCTTCTCTGCTCTTCAGGCCTGAAGCTGTGATGTCCACAGGACCTAGGAACCCATCTCGATCTTCCTaGCCAGCTTCTGAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: RASLLFRPEAVMSTGPRNPSRSS*PASEFA
Trigger: TGCAAACTCAGAAGCTGGGCAGGAAGATCGAGATGG...GTTCCTAGGTCCTGTGGACATCACAGCTTCAGGCCTGAAGAGCAGAGAAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp CCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATCACCTTCAGCATGGGCTATaGACTGGTGGCCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PMNGAAAKRTKAKCWQDHLQHGL*TGGPFL
Trigger: CAGGAAGGGGCCACCAGTGCATAGCCCATGCTGAAG...GTGATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp GCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGAGAACAGGGCTTCTCTaGTCTTCAGGCCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: AFSFSAAFSGNRERGSCLRTGLL*SSGLKL
Trigger: CAGCTTCAGGCCTGAAGAGCAGAGAAGCCCTGTTCT...CAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp CCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGAGAACAGGGCTTCTCTaGTCTTCAGGCCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PIFHPVVAEQTWMGPSALRTGLL*SSGLKL
Trigger: CAGCTTCAGGCCTGAAGAGCAGAGAAGCCCTGTTCT...CAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR GCA 90 bp GCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGCTCAGCCTCCCAAACTaGTGGGATTATAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: AFSFSAAFSGNRERGSCLLSLPN*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCAGTTTGGGAGGCTGAG...CAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp GTGGAGGGGAGGTCACTGGGAATTCCCTGGAGACTCAGTCGTTACCCACTCAACCAGACTCTACGTATATaGACCCATGAATGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VEGRSLGIPWRLSRYPLNQTLRI*THEWCS
Trigger: GCTGCACCATTCATGGGTGCATATACGTAGAGTCTG...GTTGAGTGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATATGCACCCATGAAATGGGCAGCAGGTCCTaGAGGTTCTCCCGGAACCTG +
Preference number: 4 (lower is better)
Translates to: AVSSSRAPVQTLRICTHEMGSRS*RFSRNL
Trigger: CAGGTTCCGGGAGAACCTCCAGGACCTGCTGCCCAT...TTCATGGGTGCATATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255858.12
ENST00000321205.9
CDS-3UTR CCA 90 bp GCAGAGCACCTGTTCAGACTCTACGTATATGCACCCATGAATGGTGCAGCTGCCGGATCATATCCTGCTTaGAGGCTGACAGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: AEHLFRLYVYAPMNGAAAGSYPA*RLTAGD
Trigger: GTCTCCTGCTGTCAGCCTCCAAGCAGGATATGATCC...GGCAGCTGCACCATTCATGGGTGCATATACGTAGAGTCTGAACAGGTGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTGTGGCAGAACAAACTTaGATGGGCCCCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DPSSVDWIIFSVLILSRIVAEQT*MGPSAL
Trigger: CAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC...AATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp CAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCGCTCAAACACCCAGTTaGAACAGGAATGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: QRSHSQPHSLGTGKEVPVAQTPS*NRNASW
Trigger: CCACGAGGCATTCCTGTTCCAACTGGGTGTTTGAGC...GACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATATGCACCCATGAAAGTCATACAGCTGGATaGCCTCAGGGGGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: AVSSSRAPVQTLRICTHESHTAG*PQGAAM
Trigger: CATGGCAGCCCCCTGAGGTCATCCAGCTGTATGACT...TTCATGGGTGCATATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTTGTCAAGATGGGTaGAAGGGCAGCTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GPILSGLDHLQRSHSQPHSCQDG*KGSFCK
Trigger: CTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGA...ATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR TCA 90 bp CTTCTGCAAGCAGGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATCATGGCTTTTTCCTCTaGTGGTTACCCATGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLQAGPILSGLDHLQRSHHGFFL*WLPMPG
Trigger: GCCTGGCATGGGTAACCATCAGAGGAAAAAGCCATG...ATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCTGCTTGCAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGACGTATATGCACCCATaGATGGTGCAGCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: AFSFSAAFSGNRERGSCLTYMHP*MVQLPR
Trigger: TCTTGGCAGCTGCACCATTCATGGGTGCATATACGT...CAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp TTCAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTTCCGGATCATATCCTaGTTGGAGGCTGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: FSVLILSRILWEQGKRFLFRIIS*LEADSR
Trigger: CCTGCTGTCAGCCTCCAAGCAGGATATGATCCGGAA...CAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp ATCTGCTCAAACACCCAGTTGGAACAGGAATGCCTCGTGGCACTGGCTTTAGGAAGAACAGGGCTTCTCTaGTCTTCAGGCCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ICSNTQLEQECLVALALGRTGLL*SSGLKL
Trigger: CAGCTTCAGGCCTGAAGAGCAGAGAAGCCCTGTTCT...TCCTAAAGCCAGTGCCACGAGGCATTCCTGTTCCAACTGGGTGTTTGAGCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp AGCATGGCTTTTTCCTCTGATGGTTACCCATGCCAGGCCCCACCTCTCCATGTCAGGTGCACGCCACCATaGCCGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SMAFSSDGYPCQAPPLHVRCTPP*PANFCI
Trigger: AATACAAAAATTAGCCGGGCATGGTGGCGTGCACCT...GACATGGAGAGGTGGGGCCTGGCATGGGTAACCATCAGAGGAAAAAGCCATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp AGGGCTTCTCTGCTCTTCAGGCCTGAAGCTGTGATGTCCACAGGACCTAGGAACCAGACTCTACGTATATaGACCCATGAATGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RASLLFRPEAVMSTGPRNQTLRI*THEWCS
Trigger: GCTGCACCATTCATGGGTGCATATACGTAGAGTCTG...GTTCCTAGGTCCTGTGGACATCACAGCTTCAGGCCTGAAGAGCAGAGAAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp TCTGCAAGCAGGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCGGATCATATCCTGCTTaGAGGCTGACAGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: SASRTHPQWTGSSSAFSFGSYPA*RLTAGD
Trigger: GTCTCCTGCTGTCAGCCTCCAAGCAGGATATGATCC...GAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCTGCTTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp ATTTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCGGGTCTTCACTGTGTTaGGGAGGGTCTCATCGCCTT +
Preference number: 4 (lower is better)
Translates to: ISNFPSSGGRTNLDGPQCGSSLC*GGSHRL
Trigger: AAGGCGATGAGACCCTCCCCAACACAGTGAAGACCC...GCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CTTCTGCAAGCAGGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTGAATCTTCAGCATaGGCTATGCACTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLQAGPILSGLDHLQRSHSESSA*AMHWWP
Trigger: GGGCCACCAGTGCATAGCCCATGCTGAAGATTCAGA...ATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCTGCTTGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp TCTGCAAGCAGGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCCTCAGCCGCATTCTCTaGGAACAGGGAAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SASRTHPQWTGSSSAFSFLSRIL*EQGKRF
Trigger: GAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAG...GAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCTGCTTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp TCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCCTCAGCCGCATTCTCTaGGAACAGGGAAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SSAFSFSAAFSGNRERGSLSRIL*EQGKRF
Trigger: GAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAG...GGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp TTCAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGAGGACCCATCCTCAGTaGACTGGATCATCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: FSVLILSRILWEQGKRFLRTHPQ*TGSSSA
Trigger: CGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCT...CAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATGGCATGGGTGAGTCCTaGGTGGCTGGATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: APMNGAAAKRTKAKCWQDGMGES*VAGSCQ
Trigger: TTGACAAGATCCAGCCACCCAGGACTCACCCATGCC...ATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATGTGGCAGAACAAACTTaGATGGGCCCCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: APMNGAAAKRTKAKCWQDVAEQT*MGPSAL
Trigger: CAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC...ATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GCAGAGCACCTGTTCAGACTCTACGTATATGCACCCATGAATGGTGCAGCTGCCCGTTACCCACTCAACTaGAAGGCTGAGCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: AEHLFRLYVYAPMNGAAARYPLN*KAEHGF
Trigger: AAAGCCATGCTCAGCCTTCCAGTTGAGTGGGTAACG...GGCAGCTGCACCATTCATGGGTGCATATACGTAGAGTCTGAACAGGTGCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp TTCAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTTGTCAAGATGGGTaGAAGGGCAGCTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: FSVLILSRILWEQGKRFLSCQDG*KGSFCK
Trigger: CTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGA...CAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp AGATGGTTTGCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATATGCCTGGTCCCGAACTCCTaGTCTCAGGTGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RWFAVSSSRAPVQTLRICLVPNS*SQVICP
Trigger: TGGGCAGATCACCTGAGATCAGGAGTTCGGGACCAG...GCATATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGCAAACCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp CATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTATGACCTCAGGGGGCTaGCATGTGACAATGTTGTCC +
Preference number: 4 (lower is better)
Translates to: HPQWTGSSSAFSFSAAFSMTSGG*HVTMLS
Trigger: GGACAACATTGTCACATGGCAGCCCCCTGAGGTCAT...AGAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp CCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATCACCTCAGCCTCCCAAACTaGTGGGATTATAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PMNGAAAKRTKAKCWQDHLSLPN*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCAGTTTGGGAGGCTGAG...GTGATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp GCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGAGGTGCACGCCACCATaGCCGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: AFSFSAAFSGNRERGSCLRCTPP*PANFCI
Trigger: AATACAAAAATTAGCCGGGCATGGTGGCGTGCACCT...CAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp TTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCACCCATGAATGGTaGAGCTGCCAAGAGAACCAA +
Preference number: 4 (lower is better)
Translates to: FQFSIQWWQNKLGWAPVLCTHEW*SCQENQ
Trigger: TTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGCA...GAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp CCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCCAGTTGGAACAGGAATaGCTCGTGGCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: PSSVDWIIFSVLILSRILQLEQE*LVALAL
Trigger: TAAAGCCAGTGCCACGAGGCATTCCTGTTCCAACTG...GAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp ATTTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCGTAGACCTCCACAGCTaGCTTCCACAGGTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: ISNFPSSGGRTNLDGPQCVDLHS*LPQVFQ
Trigger: CTGAAACACCTGTGGAAGCCAGCTGTGGAGGTCTAC...GCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp TTTCCTCTGATGGTTACCCATGCCAGGCCCCACCTCTCCATGTCCAATGTTCTTGATGAAATGGTGACGTaGGACAAGTGGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FPLMVTHARPHLSMSNVLDEMVT*DKWLSA
Trigger: TGCAGAGAGCCACTTGTCCCACGTCACCATTTCATC...AAGAACATTGGACATGGAGAGGTGGGGCCTGGCATGGGTAACCATCAGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCGATGAAATGGTGACGTaGGACAAGTGGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PSSVDWIIFSVLILSRILDEMVT*DKWLSA
Trigger: TGCAGAGAGCCACTTGTCCCACGTCACCATTTCATC...GAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCCGTTACCCACTCAACTaGAAGGCTGAGCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: PSSVDWIIFSVLILSRILRYPLN*KAEHGF
Trigger: AAAGCCATGCTCAGCCTTCCAGTTGAGTGGGTAACG...GAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATATGCACCCATGAATGGAGGGGAGGTCACTaGGAATTCCCTGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: AVSSSRAPVQTLRICTHEWRGGH*EFPGDS
Trigger: TGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCCA...TTCATGGGTGCATATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTGCTCAAACACCCAGTTaGAACAGGAATGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: HPQWTGSSSAFSFSAAFSAQTPS*NRNASW
Trigger: CCACGAGGCATTCCTGTTCCAACTGGGTGTTTGAGC...AGAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATGCTCAAACACCCAGTTaGAACAGGAATGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: APMNGAAAKRTKAKCWQDAQTPS*NRNASW
Trigger: CCACGAGGCATTCCTGTTCCAACTGGGTGTTTGAGC...ATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GCAGAGCACCTGTTCAGACTCTACGTATATGCACCCATGAATGGTGCAGCTGCCAAAGAGGTTCCTGTCTaGATCTTCAGCATGGGCTAT +
Preference number: 4 (lower is better)
Translates to: AEHLFRLYVYAPMNGAAAKEVPV*IFSMGY
Trigger: ATAGCCCATGCTGAAGATTCAGACAGGAACCTCTTT...GGCAGCTGCACCATTCATGGGTGCATATACGTAGAGTCTGAACAGGTGCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp TTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGAATATGACCTCAGGGGGCTaGCATGTGACAATGTTGTCC +
Preference number: 4 (lower is better)
Translates to: FSFSAAFSGNRERGSCLNMTSGG*HVTMLS
Trigger: GGACAACATTGTCACATGGCAGCCCCCTGAGGTCAT...ATTCAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp CATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTCCATCTCGATCTTCCTaGCCAGCTTCTGAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: HPQWTGSSSAFSFSAAFSPSRSS*PASEFA
Trigger: TGCAAACTCAGAAGCTGGGCAGGAAGATCGAGATGG...AGAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp GCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATATGCACCCATGAAAGAACAGGGCTTCTCTaGTCTTCAGGCCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: AVSSSRAPVQTLRICTHERTGLL*SSGLKL
Trigger: CAGCTTCAGGCCTGAAGAGCAGAGAAGCCCTGTTCT...TTCATGGGTGCATATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp TCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCAGGTGCACGCCACCATaGCCGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SSAFSFSAAFSGNRERGSRCTPP*PANFCI
Trigger: AATACAAAAATTAGCCGGGCATGGTGGCGTGCACCT...GGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTTTTCCATCCAGTGGTaGCAGAACAAACTTGGATGG +
Preference number: 4 (lower is better)
Translates to: QRSHSQPHSLGTGKEVPVFSIQW*QNKLGW
Trigger: CCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAA...GACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp CAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTTTTCCATCCAGTGGTaGCAGAACAAACTTGGATGG +
Preference number: 4 (lower is better)
Translates to: QFSIQWWQNKLGWAPVLCFSIQW*QNKLGW
Trigger: CCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAA...GCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CCA 90 bp GCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGACCAAAGCTAAATGTTaGCAGGATCACAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: AFSFSAAFSGNRERGSCLTKAKC*QDHSRC
Trigger: ACACCTGCTGTGATCCTGCCAACATTTAGCTTTGGT...CAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp GCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATAATGAGATGAAATGGTaGCGTGGGACAAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: APMNGAAAKRTKAKCWQDNEMKW*RGTSGS
Trigger: AGAGCCACTTGTCCCACGTCACCATTTCATCTCATT...ATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR TCA 90 bp TTCAGACTCTACGTATATGCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAACATGGCTTTTTCCTCTaGTGGTTACCCATGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FRLYVYAPMNGAAAKRTKHGFFL*WLPMPG
Trigger: GCCTGGCATGGGTAACCATCAGAGGAAAAAGCCATG...TTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGCATATACGTAGAGTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp GACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTACCAAAGCTAAATGTTaGCAGGATCACAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: DPSSVDWIIFSVLILSRITKAKC*QDHSRC
Trigger: ACACCTGCTGTGATCCTGCCAACATTTAGCTTTGGT...AATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp TCTAGATGGTTTGCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATAAGGACCCATCCTCAGTaGACTGGATCATCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: SRWFAVSSSRAPVQTLRIRTHPQ*TGSSSA
Trigger: CGCTGAAGATGATCCAGTCCACTGAGGATGGGTCCT...TATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGCAAACCATCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CCA 90 bp AGATGGTTTGCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATATGCTCACTGGGAATTCCCTaGAGACTCAGTCGTTACCCA +
Preference number: 4 (lower is better)
Translates to: RWFAVSSSRAPVQTLRICSLGIP*RLSRYP
Trigger: TGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGA...GCATATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGCAAACCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR GCA 90 bp TCTAGATGGTTTGCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATACAGTTGGAACAGGAATaGCTCGTGGCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: SRWFAVSSSRAPVQTLRIQLEQE*LVALAL
Trigger: TAAAGCCAGTGCCACGAGGCATTCCTGTTCCAACTG...TATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGCAAACCATCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS CCA 90 bp GGCGCAGAAAGGCTCAGGGCGCAGGTCCGCCCGCCCGCCGCCGCCTaGCCTTGTATCCGCTGCCGCCTGGTTGTGCCTCCTGGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: GAERLRAQVRPPAAA*PCIRCRLVVPPGPD
Trigger: ATCTGGCCCAGGAGGCACAACCAGGCGGCAGCGGATACAAGGCCAGGCGGCGGCGGGCGGGCGGACCTGCGCCCTGAGCCTTTCTGCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp AGGGCTTCTCTGCTCTTCAGGCCTGAAGCTGTGATGTCCACAGGACCTAGGAACCGCCGCCGCCTGGCCTaGTATCCGCTGCCGCCTGGT +
Preference number: 5 (lower is better)
Translates to: RASLLFRPEAVMSTGPRNRRRLA*YPLPPG
Trigger: ACCAGGCGGCAGCGGATACAAGGCCAGGCGGCGGCG...GTTCCTAGGTCCTGTGGACATCACAGCTTCAGGCCTGAAGAGCAGAGAAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp GGCCTGCCCACCCCTGCTGACCTCCTACATGCAGAGAACAGGGCTTCTCTGCTCGACAGCAGGAGACCCTaGGGGTCGAGGGACCCAATG +
Preference number: 5 (lower is better)
Translates to: GLPTPADLLHAENRASLLDSRRP*GSRDPM
Trigger: CATTGGGTCCCTCGACCCCAAGGGTCTCCTGCTGTC...GAGCAGAGAAGCCCTGTTCTCTGCATGTAGGAGGTCAGCAGGGGTGGGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp TGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCTGGCTGGGTGGCTGGATCTaGTCAAGATGGGTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: WAPVLCWNQDPHPAASSWLGGWI*SRWVKG
Trigger: CCCTTTCACCCATCTTGACAAGATCCAGCCACCCAG...CCAGCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp GCAGAGCACCTGTTCAGACTCTACGTATATGCACCCATGAATGGTGCAGCTGCCCGCCGCCGCCTGGCCTaGTATCCGCTGCCGCCTGGT +
Preference number: 5 (lower is better)
Translates to: AEHLFRLYVYAPMNGAAARRRLA*YPLPPG
Trigger: ACCAGGCGGCAGCGGATACAAGGCCAGGCGGCGGCG...GGCAGCTGCACCATTCATGGGTGCATATACGTAGAGTCTGAACAGGTGCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp AATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTCGCCGCCGCCTGGCCTaGTATCCGCTGCCGCCTGGT +
Preference number: 5 (lower is better)
Translates to: NFPSSGGRTNLDGPQCSARRRLA*YPLPPG
Trigger: ACCAGGCGGCAGCGGATACAAGGCCAGGCGGCGGCG...AGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp TGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTGACAGCAGGAGACCCTaGGGGTCGAGGGACCCAATG +
Preference number: 5 (lower is better)
Translates to: WWQNKLGWAPVLCWNQDPDSRRP*GSRDPM
Trigger: CATTGGGTCCCTCGACCCCAAGGGTCTCCTGCTGTC...AGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp GTGAAGGGGTTGGAGTGCACAGGTAGAGGTGGCTGGGGTCTTCACTGTGTTGGGGACAGCAGGAGACCCTaGGGGTCGAGGGACCCAATG +
Preference number: 5 (lower is better)
Translates to: VKGLECTGRGGWGLHCVGDSRRP*GSRDPM
Trigger: CATTGGGTCCCTCGACCCCAAGGGTCTCCTGCTGTC...CCCAACACAGTGAAGACCCCAGCCACCTCTACCTGTGCACTCCAACCCCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp GGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCTCACTCATGAACGACTaGACCAAGTTGAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: GWAPVLCWNQDPHPAASSSLMND*TKLKAT
Trigger: CGTGGCCTTCAACTTGGTCAAGTCGTTCATGAGTGA...GCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp GCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCGAGGGTCTCATCGCCTaGAGACTCTGCAGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: AEQTWMGPSALLEPGPSPEGLIA*RLCSVS
Trigger: GGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCTC...GGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp GAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGGGTGGCAGAACAAACTaGGATGGGCCCCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: EPRTPPEAGTPGMGESWVGGRTN*DGPQCS
Trigger: AGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACC...CACCCAGGACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp GATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCCTCCAGCTAGCTCCTGCTTCCAGTaGTCTCCCAGAATCACAATC +
Preference number: 5 (lower is better)
Translates to: DGPQCSAGTRTLTQLPPASSCFQ*SPRITI
Trigger: GATTGTGATTCTGGGAGACAACTGGAAGCAGGAGCT...AGCTGGAGGCAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp AGGGCTTCTCTGCTCTTCAGGCCTGAAGCTGTGATGTCCACAGGACCTAGGAACGACAGCAGGAGACCCTaGGGGTCGAGGGACCCAATG +
Preference number: 5 (lower is better)
Translates to: RASLLFRPEAVMSTGPRNDSRRP*GSRDPM
Trigger: CATTGGGTCCCTCGACCCCAAGGGTCTCCTGCTGTC...GTTCCTAGGTCCTGTGGACATCACAGCTTCAGGCCTGAAGAGCAGAGAAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp GGAGGGGAGGTCACTGGGAATTCCCTGGAGACTCAGTCGTTACCCACTCAACTGGAGGGTCTCATCGCCTaGAGACTCTGCAGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: GGEVTGNSLETQSLPTQLEGLIA*RLCSVS
Trigger: GGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCTC...CAGTTGAGTGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp GCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTGGGGTCTTCACTGTGTaGGGGAGGGTCTCATCGCCT +
Preference number: 5 (lower is better)
Translates to: AWVSPGWLDLVKMGERAAGVFTV*GRVSSP
Trigger: AGGCGATGAGACCCTCCCCAACACAGTGAAGACCCC...AGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp CACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGGGGTCTTCACTGTGTaGGGGAGGGTCTCATCGCCT +
Preference number: 5 (lower is better)
Translates to: HQAWVSPGWLDLVKMGERGVFTV*GRVSSP
Trigger: AGGCGATGAGACCCTCCCCAACACAGTGAAGACCCC...CCTTTCACCCATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp ACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACCCAGCTGCTGGGTGGCTGGATCTaGTCAAGATGGGTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: TNLDGPQCSAGTRTLTQLLGGWI*SRWVKG
Trigger: CCCTTTCACCCATCTTGACAAGATCCAGCCACCCAG...CAGCTGGGTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp CATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGTGGCAGAACAAACTaGGATGGGCCCCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: HPVVAEQTWMGPSALLEPGGRTN*DGPQCS
Trigger: AGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACC...TGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp GGACCTAGGAACCACGCACACCCCCTGAAGCTGGAACACCAGGCATGGGTGAGTTGCTCAAACACCCAGTaGGAACAGGAATGCCTCGTG +
Preference number: 5 (lower is better)
Translates to: GPRNHAHPLKLEHQAWVSCSNTQ*EQECLV
Trigger: CACGAGGCATTCCTGTTCCAACTGGGTGTTTGAGCA...ACTCACCCATGCCTGGTGTTCCAGCTTCAGGGGGTGTGCGTGGTTCCTAGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp CACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGCGGATCATATCCTGCTaGGAGGCTGACAGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: HQAWVSPGWLDLVKMGERRIISC*EADSRR
Trigger: TCTCCTGCTGTCAGCCTCCAAGCAGGATATGATCCG...CCTTTCACCCATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp GTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCAAACGACTTGACCAAGTaGAAGGCCACGGGGAACAGT +
Preference number: 5 (lower is better)
Translates to: VAEQTWMGPSALLEPGPSNDLTK*KATGNS
Trigger: ACTGTTCCCCGTGGCCTTCAACTTGGTCAAGTCGTT...TGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp GACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTGTCTCCTCAGAGGCCTaGTCGGGAAGCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: DPSSVDWIIFSVLILSRIVSSEA*SGSSTS
Trigger: GGAGGTGCTGCTTCCCGACAAGGCCTCTGAGGAGAC...AATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp CCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCGTCTCCTCAGAGGCCTaGTCGGGAAGCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: PSSVDWIIFSVLILSRILVSSEA*SGSSTS
Trigger: GGAGGTGCTGCTTCCCGACAAGGCCTCTGAGGAGAC...GAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp CAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCGGGGTCTTCACTGTGTaGGGGAGGGTCTCATCGCCT +
Preference number: 5 (lower is better)
Translates to: QRSHSQPHSLGTGKEVPVGVFTV*GRVSSP
Trigger: AGGCGATGAGACCCTCCCCAACACAGTGAAGACCCC...GACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp GGTGGCTGGATCTTGTCAAGATGGGTGAAAGGGCAGCTTCTGCAAGCAGGACCCCTGGGTGGCTGGATCTaGTCAAGATGGGTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: GGWILSRWVKGQLLQAGPLGGWI*SRWVKG
Trigger: CCCTTTCACCCATCTTGACAAGATCCAGCCACCCAG...GGGTCCTGCTTGCAGAAGCTGCCCTTTCACCCATCTTGACAAGATCCAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp CACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAAGATGGGTGAAAGGAGGGACCCAATGATGTaGAAGTACACAGGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: HQAWVSPGWLDLVKMGERRDPMM*KYTGQP
Trigger: AGGCTGCCCTGTGTACTTCAACATCATTGGGTCCCT...CCTTTCACCCATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp GGAGGGGAGGTCACTGGGAATTCCCTGGAGACTCAGTCGTTACCCACTCAACTGAACGACTTGACCAAGTaGAAGGCCACGGGGAACAGT +
Preference number: 5 (lower is better)
Translates to: GGEVTGNSLETQSLPTQLNDLTK*KATGNS
Trigger: ACTGTTCCCCGTGGCCTTCAACTTGGTCAAGTCGTT...CAGTTGAGTGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp AGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCTCACTCATGAACGACTaGACCAAGTTGAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: SGGRTNLDGPQCSAGTRTSLMND*TKLKAT
Trigger: CGTGGCCTTCAACTTGGTCAAGTCGTTCATGAGTGA...GGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp TGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGAACCAGGACCCTCACAGCTCCTGCTTCCAGTaGTCTCCCAGAATCACAATC +
Preference number: 5 (lower is better)
Translates to: WQNKLGWAPVLCWNQDPHSSCFQ*SPRITI
Trigger: GATTGTGATTCTGGGAGACAACTGGAAGCAGGAGCT...GTGAGGGTCCTGGTTCCAGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp GGACCCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATGGTGGCAGAACAAACTaGGATGGGCCCCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: GPILSGLDHLQRSHSQPHGGRTN*DGPQCS
Trigger: AGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACC...ATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp CAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCCGGATCATATCCTGCTaGGAGGCTGACAGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: QFSIQWWQNKLGWAPVLCRIISC*EADSRR
Trigger: TCTCCTGCTGTCAGCCTCCAAGCAGGATATGATCCG...GCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp GGAGGGGAGGTCACTGGGAATTCCCTGGAGACTCAGTCGTTACCCACTCAACTGAGCAGCTCACAGACTTaGATGCGCTTCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: GGEVTGNSLETQSLPTQLSSSQT*MRFRII
Trigger: TATGATCCGGAAGCGCATCAAAGTCTGTGAGCTGCT...CAGTTGAGTGGGTAACGACTGAGTCTCCAGGGAATTCCCAGTGACCTCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp GCTGACAGCAGGAGACCCTTGGGGTCGAGGGACCCAATGATGTTGAAGTACACAAACGACTTGACCAAGTaGAAGGCCACGGGGAACAGT +
Preference number: 5 (lower is better)
Translates to: ADSRRPLGSRDPMMLKYTNDLTK*KATGNS
Trigger: ACTGTTCCCCGTGGCCTTCAACTTGGTCAAGTCGTT...TGTGTACTTCAACATCATTGGGTCCCTCGACCCCAAGGGTCTCCTGCTGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp GTCGAGGGACCCAATGATGTTGAAGTACACAGGGCAGCCTTCGTAGTCGTAGCCAACGACTTGACCAAGTaGAAGGCCACGGGGAACAGT +
Preference number: 5 (lower is better)
Translates to: VEGPNDVEVHRAAFVVVANDLTK*KATGNS
Trigger: ACTGTTCCCCGTGGCCTTCAACTTGGTCAAGTCGTT...GGCTACGACTACGAAGGCTGCCCTGTGTACTTCAACATCATTGGGTCCCTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp TCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGAATCTTCAGCATGAGGGTCTCATCGCCTaGAGACTCTGCAGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: SAAFSGNRERGSCLNLQHEGLIA*RLCSVS
Trigger: GGAGACGCTGCAGAGTCTCAAGGCGATGAGACCCTC...ATGCTGAAGATTCAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp GGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGCTGGGTGGCTGGATCTaGTCAAGATGGGTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: GLDHLQRSHSQPHSLGTGLGGWI*SRWVKG
Trigger: CCCTTTCACCCATCTTGACAAGATCCAGCCACCCAG...CCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp AATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGCTGGTGGCAGAACAAACTaGGATGGGCCCCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: NFPSSGGRTNLDGPQCSAGGRTN*DGPQCS
Trigger: AGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACC...AGCAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp AAGCTGGAACACCAGGCATGGGTGAGTCCTGGGTGGCTGGATCTTGTCAAGATGTCACTCATGAACGACTaGACCAAGTTGAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: KLEHQAWVSPGWLDLVKMSLMND*TKLKAT
Trigger: CGTGGCCTTCAACTTGGTCAAGTCGTTCATGAGTGA...CATCTTGACAAGATCCAGCCACCCAGGACTCACCCATGCCTGGTGTTCCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp AGATGGTTTGCTGTTTCTAGCAGCAGAGCACCTGTTCAGACTCTACGTATATGCGTCTCCTCAGAGGCCTaGTCGGGAAGCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: RWFAVSSSRAPVQTLRICVSSEA*SGSSTS
Trigger: GGAGGTGCTGCTTCCCGACAAGGCCTCTGAGGAGAC...GCATATACGTAGAGTCTGAACAGGTGCTCTGCTGCTAGAAACAGCAAACCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp ATTTCCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCCGGATCATATCCTGCTaGGAGGCTGACAGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: ISNFPSSGGRTNLDGPQCRIISC*EADSRR
Trigger: TCTCCTGCTGTCAGCCTCCAAGCAGGATATGATCCG...GCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp CAACAGCAGCTCACAGACTTTGATGCGCTTCCGGATCATATCCTGCTTGGAGGCAGCAGCTCACAGACTTaGATGCGCTTCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: QQQLTDFDALPDHILLGGSSSQT*MRFRII
Trigger: TATGATCCGGAAGCGCATCAAAGTCTGTGAGCTGCT...GCCTCCAAGCAGGATATGATCCGGAAGCGCATCAAAGTCTGTGAGCTGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp CCAATTTTCCATCCAGTGGTGGCAGAACAAACTTGGATGGGCCCCAGTGCTCTGAGCAGCTCACAGACTTaGATGCGCTTCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: PIFHPVVAEQTWMGPSALSSSQT*MRFRII
Trigger: TATGATCCGGAAGCGCATCAAAGTCTGTGAGCTGCT...CAGAGCACTGGGGCCCATCCAAGTTTGTTCTGCCACCACTGGATGGAAAATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
ENST00000381982.3
CDS-3UTR CAA 90 bp ATCTGCTCAAACACCCAGTTGGAACAGGAATGCCTCGTGGCACTGGCTTTAGGATGCTCAAACACCCAGTaGGAACAGGAATGCCTCGTG +
Preference number: 5 (lower is better)
Translates to: ICSNTQLEQECLVALALGCSNTQ*EQECLV
Trigger: CACGAGGCATTCCTGTTCCAACTGGGTGTTTGAGCA...TCCTAAAGCCAGTGCCACGAGGCATTCCTGTTCCAACTGGGTGTTTGAGCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp CCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCTGCTCAAACACCCAGTaGGAACAGGAATGCCTCGTG +
Preference number: 5 (lower is better)
Translates to: PSSVDWIIFSVLILSRILCSNTQ*EQECLV
Trigger: CACGAGGCATTCCTGTTCCAACTGGGTGTTTGAGCA...GAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp GCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATAGGGACCCAATGATGTaGAAGTACACAGGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: APMNGAAAKRTKAKCWQDRDPMM*KYTGQP
Trigger: AGGCTGCCCTGTGTACTTCAACATCATTGGGTCCCT...ATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp CCATCCTCAGTGGACTGGATCATCTTCAGCGTTCTCATTCTCAGCCGCATTCTCAGCAGCTCACAGACTTaGATGCGCTTCCGGATCATA +
Preference number: 5 (lower is better)
Translates to: PSSVDWIIFSVLILSRILSSSQT*MRFRII
Trigger: TATGATCCGGAAGCGCATCAAAGTCTGTGAGCTGCT...GAGAATGCGGCTGAGAATGAGAACGCTGAAGATGATCCAGTCCACTGAGGATGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp GCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATTCACTCATGAACGACTaGACCAAGTTGAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: APMNGAAAKRTKAKCWQDSLMND*TKLKAT
Trigger: CGTGGCCTTCAACTTGGTCAAGTCGTTCATGAGTGA...ATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp CCCATGAATGGTGCAGCTGCCAAGAGAACCAAAGCTAAATGTTGGCAGGATCACAGCTCCTGCTTCCAGTaGTCTCCCAGAATCACAATC +
Preference number: 5 (lower is better)
Translates to: PMNGAAAKRTKAKCWQDHSSCFQ*SPRITI
Trigger: GATTGTGATTCTGGGAGACAACTGGAAGCAGGAGCT...GTGATCCTGCCAACATTTAGCTTTGGTTCTCTTGGCAGCTGCACCATTCATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp TCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGAATCTTCAGCATAGCTCCTGCTTCCAGTaGTCTCCCAGAATCACAATC +
Preference number: 5 (lower is better)
Translates to: SAAFSGNRERGSCLNLQHSSCFQ*SPRITI
Trigger: GATTGTGATTCTGGGAGACAACTGGAAGCAGGAGCT...ATGCTGAAGATTCAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp GCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTCTGTTTAATCTAGATGGTTaGCTGTTTCTAGCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: AFSFSAAFSGNRERGSCLFNLDG*LFLAAE
Trigger: CTCTGCTGCTAGAAACAGCAAACCATCTAGATTAAA...CAGACAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp TTCAGCGTTCTCATTCTCAGCCGCATTCTCTGGGAACAGGGAAAGAGGTTCCTGTTTAATCTAGATGGTTaGCTGTTTCTAGCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: FSVLILSRILWEQGKRFLFNLDG*LFLAAE
Trigger: CTCTGCTGCTAGAAACAGCAAACCATCTAGATTAAA...CAGGAACCTCTTTCCCTGTTCCCAGAGAATGCGGCTGAGAATGAGAACGCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS-3UTR CAA 90 bp TTCAGACTCTACGTATATGCACCCATGAATGGTGCAGCTGCCAAGAGAACCAAATTTAATCTAGATGGTTaGCTGTTTCTAGCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: FRLYVYAPMNGAAAKRTKFNLDG*LFLAAE
Trigger: CTCTGCTGCTAGAAACAGCAAACCATCTAGATTAAA...TTTGGTTCTCTTGGCAGCTGCACCATTCATGGGTGCATATACGTAGAGTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255858.12
ENST00000320982.3
ENST00000321205.9
CDS GCA 72 bp GGGACTTGGGTCCTTCGGAGCATGTCTTCGGATTTCTaGAGGTCAAAGTTTCGAGCTCGCAGCCAGCGCAGG +
Preference number: 6 (lower is better)
Translates to: GTWVLRSMSSDF*RSKFRARSQRR
Trigger: CCTGCGCTGGCTGCGAGCTCGAAACTTTGACCTGCAGAAATCCGAAGACATGCTCCGAAGGACCCAAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321205.9