RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC14L3 (Homo sapiens)

Ensembl gene IDs: ENSG00000100012

Ensembl transcript IDs: ENST00000215812.9, ENST00000401751.5, ENST00000402286.5, ENST00000403066.5, ENST00000434642.5, ENST00000540910.5

Found 450 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGGGGGTGGTGGAGCAAGGGCCTTCCTCCTGCCCTCTCTGCCCATaGCCAAGCCTCCCTTGGCCAGCTGTGCACCTGGTAAGGCCGCTC +
Preference number: 1 (lower is better)
Translates to: EGVVEQGPSSCPLCP*PSLPWPAVHLVRPL
Trigger: GAGCGGCCTTACCAGGTGCACAGCTGGCCAAGGGAGGCTTGGTCATGGGCAGAGAGGGCAGGAGGAAGGCCCTTGCTCCACCACCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403066.5
3UTR GCA 90 bp TGCAGGATGCGCTCACAGTCCCTCATCTTGGTCTTGAGCAGGTCCTaGTTGGTGACTGAGAAGAGCAACCCCTTGGGATCAAGTGGCCCA +
Preference number: 1 (lower is better)
Translates to: CRMRSQSLILVLSRS*LVTEKSNPLGSSGP
Trigger: TGGGCCACTTGATCCCAAGGGGTTGCTCTTCTCAGTCACCAAGCAGGACCTGCTCAAGACCAAGATGAGGGACTGTGAGCGCATCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR TCA 90 bp CGGGATAACCACCACCCCAGGCCTGGGCTGCAGGTCTTGGCATCCTaGAGATACAAGCAAGAGGAGACTTCTTTCCTCATAGCCTGTGAG +
Preference number: 1 (lower is better)
Translates to: RDNHHPRPGLQVLAS*RYKQEETSFLIACE
Trigger: CTCACAGGCTATGAGGAAAGAAGTCTCCTCTTGCTTGTATCTTCAGGATGCCAAGACCTGCAGCCCAGGCCTGGGGTGGTGGTTATCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403066.5
3UTR GCA 90 bp GTCTCAATCTTCTTCCCTAGCCTCTCTGTCTGCAGGTCACACTCATaGAGGATGCGCTCACAGTCCCTCATCTTGGTCTTGAGCAGGTCC +
Preference number: 1 (lower is better)
Translates to: VSIFFPSLSVCRSHS*RMRSQSLILVLSRS
Trigger: GGACCTGCTCAAGACCAAGATGAGGGACTGTGAGCGCATCCTGCATGAGTGTGACCTGCAGACAGAGAGGCTAGGGAAGAAGATTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR CCA 90 bp AAACATTTGGGGTTCCCATCTGGGTCAGTCAGGGTGCCCCCAAACTaGGCAGGCAGTTCCTCAGGACTGATGAGTTTCAGCAAACCTTCC +
Preference number: 1 (lower is better)
Translates to: KHLGFPSGSVRVPPN*AGSSSGLMSFSKPS
Trigger: GGAAGGTTTGCTGAAACTCATCAGTCCTGAGGAACTGCCTGCCCAGTTTGGGGGCACCCTGACTGACCCAGATGGGAACCCCAAATGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR TCA 90 bp CTGAAATCCACCCCACATAGGCTCCTCCTAATCATGTACAGCTGTTaGGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACA +
Preference number: 1 (lower is better)
Translates to: LKSTPHRLLLIMYSC*VTCTLPSGPPFNAT
Trigger: TGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGATTAGGAGGAGCCTATGTGGGGTGGATTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR CCA 90 bp AGAAGTGTTTCAGTCCCAGGCCCTCACAGTCAAATATCATCACGATaGTCTCAATCTTCTTCCCTAGCCTCTCTGTCTGCAGGTCACACT +
Preference number: 1 (lower is better)
Translates to: RSVSVPGPHSQISSR*SQSSSLASLSAGHT
Trigger: AGTGTGACCTGCAGACAGAGAGGCTAGGGAAGAAGATTGAGACCATCGTGATGATATTTGACTGTGAGGGCCTGGGACTGAAACACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CCA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTCCTGAGCAGAGCTTaGCATGCAGTAGATGCTCAG +
Preference number: 2 (lower is better)
Translates to: EARAPQPGQTPGAGLTPILLSRA*HAVDAQ
Trigger: CTGAGCATCTACTGCATGCCAAGCTCTGCTCAGGAG...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
3UTR-3UTR TCA 90 bp ACCAGGATCCCAGGTCACCCATTTCTCTCCCTTGACCGTCACAGTGCATCTGGGAGACCACGTAGGGGGTaGGTCCTCTTACACACAGGC +
Preference number: 2 (lower is better)
Translates to: TRIPGHPFLSLDRHSASGRPRRG*VLLHTG
Trigger: GCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCT...CCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403066.5
3UTR-3UTR GCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCTTCCCTTCCTTGGTCTaGCCTAGGCCCTCTGAGTAT +
Preference number: 2 (lower is better)
Translates to: AGLTPILLSWPPEQSLACFPSLV*PRPSEY
Trigger: ATACTCAGAGGGCCTAGGGCAGACCAAGGAAGGGAA...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
3UTR-3UTR GCA 90 bp ACCAGGATCCCAGGTCACCCATTTCTCTCCCTTGACCGTCACAGTGCATCTGGGGGCTCACTCCTATCCTaGTCTCTTGGCCTCCTGAGC +
Preference number: 2 (lower is better)
Translates to: TRIPGHPFLSLDRHSASGGSLLS*SLGLLS
Trigger: GCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCC...CCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403066.5
3UTR-3UTR CCA 90 bp ACCAGGATCCCAGGTCACCCATTTCTCTCCCTTGACCGTCACAGTGCATCTGGGCTCTTAGAAGCAGCATaGCAAGGCGGTCAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: TRIPGHPFLSLDRHSASGLLEAA*QGGQEP
Trigger: GGGCTCCTGACCGCCTTGCCATGCTGCTTCTAAGAG...CCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
3UTR-3UTR CCA 90 bp TGGGTCTCCAGAAGAGAGTCCAACCCCACCACACATCTGCTCCTGTCCAAGGTGCTGCACCCTACCTTCTaGTCCTCCATTCAATGCCAC +
Preference number: 2 (lower is better)
Translates to: WVSRRESNPTTHLLLSKVLHPTF*SSIQCH
Trigger: GTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAG...CACCTTGGACAGGAGCAGATGTGTGGTGGGGTTGGACTCTCTTCTGGAGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR-3UTR CCA 90 bp AGTCAGGGTGCCCCCAAACTGGGCAGGCAGTTCCTCAGGACTGATGAGTTTCAGCTTCTGGATCACCTCTaGGGGCTGCCAATCAAGGAT +
Preference number: 2 (lower is better)
Translates to: SQGAPKLGRQFLRTDEFQLLDHL*GLPIKD
Trigger: ATCCTTGATTGGCAGCCCCCAGAGGTGATCCAGAAG...CTGAAACTCATCAGTCCTGAGGAACTGCCTGCCCAGTTTGGGGGCACCCTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CCA 90 bp AGTGGGTTAGGGTGGGAAGCTGAGCGTGCAAGTCAGACAAAGCCTGATGTAGGCCCTCTTCTGCAACCTTaGTACCCTCCAAGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: SGLGWEAERASQTKPDVGPLLQP*YPPRLC
Trigger: GCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGG...GCCTACATCAGGCTTTGTCTGACTTGCACGCTCAGCTTCCCACCCTAACCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR-3UTR CCA 90 bp GCCGCGGTTGATCTGCACCGAGTGCTCGTACTGAGTCTTCACCTGGTCCCGCACTATGGTCAATATCCATaGTCTTCCGGAACTCCATGT +
Preference number: 2 (lower is better)
Translates to: AAVDLHRVLVLSLHLVPHYGQYP*SSGTPC
Trigger: ACATGGAGTTCCGGAAGACCATGGATATTGACCATA...GTGCGGGACCAGGTGAAGACTCAGTACGAGCACTCGGTGCAGATCAACCGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CCA 90 bp CAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAACCAGGCATGTACTTCTaGATCACCTCTGGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: QLLSHLHPTFWSSIQCHKPGMYF*ITSGGC
Trigger: GCAGCCCCCAGAGGTGATCCAGAAGTACATGCCTGG...TTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR TCA 90 bp CCTTGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATGCAGGTCCTGCTTGGTaGCTGAGAAGAGCAACCCCT +
Preference number: 2 (lower is better)
Translates to: PCFFLFCNLGTLQGCASHAGPAW*LRRATP
Trigger: AGGGGTTGCTCTTCTCAGTCACCAAGCAGGACCTGC...ATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR GCA 90 bp TCCTTATCATATTTCTGCATGCCCTCGTCAGGGAGCAGGACCTCCACTGTGAAGTGCAGGTCACACTCATaGAGGATGCGCTCACAGTCC +
Preference number: 2 (lower is better)
Translates to: SLSYFCMPSSGSRTSTVKCRSHS*RMRSQS
Trigger: GGACTGTGAGCGCATCCTGCATGAGTGTGACCTGCA...CTTCACAGTGGAGGTCCTGCTCCCTGACGAGGGCATGCAGAAATATGATAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CCA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTGGCATGTGGCCTTTGTaGCTGGGGCCCTCAAAAGAC +
Preference number: 2 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGGMWPL*LGPSKD
Trigger: GTCTTTTGAGGGCCCCAGCCACAAAGGCCACATGCC...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR-3UTR CCA 90 bp ATGTGCAACAAGGGAAGTGGGTTAGGGTGGGAAGCTGAGCGTGCAAGTCAGACACCACTGCCAGAAATCTaGAGACTGAATTGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: MCNKGSGLGWEAERASQTPLPEI*RLNCLG
Trigger: ACCCAGACAATTCAGTCTCCAGATTTCTGGCAGTGG...TGTCTGACTTGCACGCTCAGCTTCCCACCCTAACCCACTTCCCTTGTTGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR-3UTR GCA 90 bp TCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGTCAAGCATACACACCTaGCTTAGGGTAGGTGAGGAC +
Preference number: 2 (lower is better)
Translates to: SCTAVESPAPYLLVLHSMSSIHT*LRVGED
Trigger: GTCCTCACCTACCCTAAGGCAGGTGTGTATGCTTGA...CATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR GCA 90 bp CACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATATACACTGAGCATCACCTCTGGGGGCTaGCAATCAAGGATATGGTCA +
Preference number: 2 (lower is better)
Translates to: HLHPTFWSSIQCHKYTLSITSGG*QSRIWS
Trigger: TGACCATATCCTTGATTGGCAGCCCCCAGAGGTGAT...GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR GCA 90 bp AGTCCCAGGCCCTCACAGTCAAATATCATCACGATGGTCTCAATCTTCTTCCCTCACACTCATGCAGGATaGGCTCACAGTCCCTCATCT +
Preference number: 2 (lower is better)
Translates to: SPRPSQSNIITMVSIFFPHTHAG*AHSPSS
Trigger: AGATGAGGGACTGTGAGCGCATCCTGCATGAGTGTG...AGGGAAGAAGATTGAGACCATCGTGATGATATTTGACTGTGAGGGCCTGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CCA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAACCTATCAGAGGCATGTaGCCTTTGTGGCTGGGGCCC +
Preference number: 2 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQPIRGM*PLWLGP
Trigger: GGGCCCCAGCCACAAAGGCCACATGCCTCTGATAGG...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR-3UTR CCA 90 bp ACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAAGGCCAAAGAACTCCTaGTACACTTCTACCAGAGGT +
Preference number: 2 (lower is better)
Translates to: TAVESPAPYLLVLHSMPQRPKNS*YTSTRG
Trigger: ACCTCTGGTAGAAGTGTACCAGGAGTTCTTTGGCCT...TTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR GCA 90 bp CAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAAAAAGCCTCCGACTTCTaGAAGTCAAAATTCCGAGCT +
Preference number: 2 (lower is better)
Translates to: QLLSHLHPTFWSSIQCHKKASDF*KSKFRA
Trigger: AGCTCGGAATTTTGACTTGCAGAAGTCGGAGGCTTT...TTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR GCA 90 bp CCTTGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATTATCATATTTCTGCATaGCCTCGTCAGGGAGCAGGA +
Preference number: 2 (lower is better)
Translates to: PCFFLFCNLGTLQGCASHYHISA*PRQGAG
Trigger: TCCTGCTCCCTGACGAGGGCATGCAGAAATATGATA...ATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CCA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATCCTCTTCTGCAACCTTaGTACCCTCCAAGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: TESGGLTINFREGGSVGYPLLQP*YPPRLC
Trigger: GCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGG...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CCA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATAGGGTGCCCCCAAACTaGGCAGGCAGTTCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHRVPPN*AGSSSG
Trigger: TCCTGAGGAACTGCCTGCCCAGTTTGGGGGCACCCT...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR GCA 90 bp TCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGTGCTTTTTCCTCTTCTaGAACCTTGGTACCCTCCAA +
Preference number: 2 (lower is better)
Translates to: SCTAVESPAPYLLVLHSMCFFLF*NLGTLQ
Trigger: TTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCA...CATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR GCA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATTCAAGCATACACACCTaGCTTAGGGTAGGTGAGGAC +
Preference number: 2 (lower is better)
Translates to: TESGGLTINFREGGSVGYSSIHT*LRVGED
Trigger: GTCCTCACCTACCCTAAGGCAGGTGTGTATGCTTGA...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR GCA 90 bp ACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAATGGTCCTCCATTCAATaGCACAAATATACACTGAGC +
Preference number: 2 (lower is better)
Translates to: TAVESPAPYLLVLHSMPQWSSIQ*HKYTLS
Trigger: GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCA...TTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CCA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATCCCCTTGGGATCAAGTaGCCCAATGATGTCATACCA +
Preference number: 2 (lower is better)
Translates to: TESGGLTINFREGGSVGYPLGIK*PNDVIP
Trigger: TGGTATGACATCATTGGGCCACTTGATCCCAAGGGG...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR TCA 90 bp TTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCAATCATGTACAGCTGTTaGGTCACCTGCACCCTACCT +
Preference number: 2 (lower is better)
Translates to: LDMSPTQVAHSHTEGIQAIMYSC*VTCTLP
Trigger: AGGTAGGGTGCAGGTGACTCAACAGCTGTACATGAT...TGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR GCA 90 bp AATCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCTTTTTCCTCTTCTaGAACCTTGGTACCCTCCAA +
Preference number: 2 (lower is better)
Translates to: NHVQLLSHLHPTFWSSIQCFFLF*NLGTLQ
Trigger: TTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCA...TTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR GCA 90 bp TCCAGAAGTGTTTCAGTCCCAGGCCCTCACAGTCAAATATCATCACGATGGTCTTGCTTTTTCCTCTTCTaGAACCTTGGTACCCTCCAA +
Preference number: 2 (lower is better)
Translates to: SRSVSVPGPHSQISSRWSCFFLF*NLGTLQ
Trigger: TTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCA...AGACCATCGTGATGATATTTGACTGTGAGGGCCTGGGACTGAAACACTTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR GCA 90 bp TTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATCAAGCATACACACCTaGCTTAGGGTAGGTGAGGAC +
Preference number: 2 (lower is better)
Translates to: LDMSPTQVAHSHTEGIQASSIHT*LRVGED
Trigger: GTCCTCACCTACCCTAAGGCAGGTGTGTATGCTTGA...TGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR TCA 90 bp ACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAGCCACAAATATACACTaGGCATCTACTATATATAGG +
Preference number: 2 (lower is better)
Translates to: TAVESPAPYLLVLHSMPQATNIH*ASTIYR
Trigger: CCTATATATAGTAGATGCTCAGTGTATATTTGTGGC...TTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR GCA 90 bp AATCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAAATGACACCCACTTCTTaGCTTTACCCTTGCTTTTTC +
Preference number: 2 (lower is better)
Translates to: NHVQLLSHLHPTFWSSIQMTPTS*LYPCFF
Trigger: GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCAT...TTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR GCA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATGTCTTGAGCAGGTCCTaGTTGGTGACTGAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHVLSRS*LVTEKS
Trigger: GCTCTTCTCAGTCACCAAGCAGGACCTGCTCAAGAC...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CCA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATCCTCTTCTGCAACCTTaGTACCCTCCAAGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHPLLQP*YPPRLC
Trigger: GCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGG...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR CAA 90 bp TTGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTaGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: LLFIEFHDTHFLPLP*LFPLLQPWYPPRLC
Trigger: GCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR GCA 90 bp TTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATGCTTTTTCCTCTTCTaGAACCTTGGTACCCTCCAA +
Preference number: 2 (lower is better)
Translates to: LDMSPTQVAHSHTEGIQACFFLF*NLGTLQ
Trigger: TTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCA...TGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CCA 90 bp GCTAGGGGATTCATTTTGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTGCAGGAAGCACATCCTaGACGTTTTCTCGGAACTGT +
Preference number: 2 (lower is better)
Translates to: ARGFILLFIEFHDTHFLPAGSTS*TFSRNC
Trigger: ACAGTTCCGAGAAAACGTCCAGGATGTGCTTCCTGC...AGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCAAAATGAATCCCCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR GCA 90 bp TTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATGGTCCTCCATTCAATaGCACAAATATACACTGAGC +
Preference number: 2 (lower is better)
Translates to: LDMSPTQVAHSHTEGIQAWSSIQ*HKYTLS
Trigger: GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCA...TGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR GCA 90 bp CTGCCTTTGCTTCCAGGAAAGTCCCTAAAACATAAGCTATGTGCAACAAGGGAATGGTCCTCCATTCAATaGCACAAATATACACTGAGC +
Preference number: 2 (lower is better)
Translates to: LPLLPGKSLKHKLCATREWSSIQ*HKYTLS
Trigger: GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCA...TTCCCTTGTTGCACATAGCTTATGTTTTAGGGACTTTCCTGGAAGCAAAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR-3UTR CCA 90 bp CTACTATATATAGGGAGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAACTGCACCCTACCTTCTaGTCCTCCATTCAATGCCAC +
Preference number: 2 (lower is better)
Translates to: LLYIGSGSKKDLDMSPTQLHPTF*SSIQCH
Trigger: GTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAG...TTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACTCCCTATATATAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR GCA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATTGGTCCTCCATTCAATaGCACAAATATACACTGAGC +
Preference number: 2 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHWSSIQ*HKYTLS
Trigger: GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCA...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CCA 90 bp TTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCACAAATATCATCACGATaGTCTCAATCTTCTTCCCTA +
Preference number: 2 (lower is better)
Translates to: LDMSPTQVAHSHTEGIQAQISSR*SQSSSL
Trigger: TAGGGAAGAAGATTGAGACCATCGTGATGATATTTG...TGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CCA 90 bp CTACTATATATAGGGAGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAACCACTGCCAGAAATCTaGAGACTGAATTGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: LLYIGSGSKKDLDMSPTQPLPEI*RLNCLG
Trigger: ACCCAGACAATTCAGTCTCCAGATTTCTGGCAGTGG...TTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACTCCCTATATATAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR-3UTR CCA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATTGCCAATCAAGGATATaGTCAATATCCATGGTCTTC +
Preference number: 2 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHCQSRI*SISMVF
Trigger: GAAGACCATGGATATTGACCATATCCTTGATTGGCA...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR CCA 72 bp GTTCTGGGCATAGGACTCCCTTGGGAGAGGGGGTGGTaGAGCAAGGGCCTTCCTCCTGCCCTCTCTGCCCAT +
Preference number: 3 (lower is better)
Translates to: VLGIGLPWERGW*SKGLPPALSAH
Trigger: ATGGGCAGAGAGGGCAGGAGGAAGGCCCTTGCTCCACCACCCCCTCTCCCAAGGGAGTCCTATGCCCAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403066.5
3UTR-3UTR CAA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCACTTCTTTCCCTTCCTaGGTCTGCCCTAGGCCCTCT +
Preference number: 3 (lower is better)
Translates to: GSPARPNPRCRAHSYPALTSFPS*VCPRPS
Trigger: AGAGGGCCTAGGGCAGACCAAGGAAGGGAAAGAAGT...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
3UTR CCA 72 bp GGGTTCCCATCTGGGTCAGTCAGGGTGCCCCCAAACTaGGCAGGCAGTTCCTCAGGACTGATGAGTTTCAGC +
Preference number: 3 (lower is better)
Translates to: GFPSGSVRVPPN*AGSSSGLMSFS
Trigger: GCTGAAACTCATCAGTCCTGAGGAACTGCCTGCCCAGTTTGGGGGCACCCTGACTGACCCAGATGGGAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR TCA 72 bp GATGAGCCGCGGTTGATCTGCACCGAGTGCTCGTACTaGGTCTTCACCTGGTCCCGCACGTACATGGACTTG +
Preference number: 3 (lower is better)
Translates to: DEPRLICTECSY*VFTWSRTYMDL
Trigger: CAAGTCCATGTACGTGCGGGACCAGGTGAAGACTCAGTACGAGCACTCGGTGCAGATCAACCGCGGCTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR TCA 72 bp AGCCACCAGGATCCCAGGTCACCCATTTCTCTCCCTTaGCCGTCACAGTGCATCTGGGGAGCCTTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: SHQDPRSPISLP*PSQCIWGAFQS
Trigger: AGACTGAAAGGCTCCCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403066.5
3UTR CCA 72 bp AGGCAGCTCCTATCAGAGGCATGTGGCCTTTGTGGCTaGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTG +
Preference number: 3 (lower is better)
Translates to: RQLLSEACGLCG*GPQKTATARNL
Trigger: CAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGCCACAAAGGCCACATGCCTCTGATAGGAGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR GCA 72 bp CGCTCACAGTCCCTCATCTTGGTCTTGAGCAGGTCCTaGTTGGTGACTGAGAAGAGCAACCCCTTGGGATCA +
Preference number: 3 (lower is better)
Translates to: RSQSLILVLSRS*LVTEKSNPLGS
Trigger: TGATCCCAAGGGGTTGCTCTTCTCAGTCACCAAGCAGGACCTGCTCAAGACCAAGATGAGGGACTGTGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CAA 90 bp GGGGTGAGCTCCTTATCATATTTCTGCATGCCCTCGTCAGGGAGCAGGACCTCCAATCATGTACAGCTGTaGAGTCACCTGCACCCTACC +
Preference number: 3 (lower is better)
Translates to: GVSSLSYFCMPSSGSRTSNHVQL*SHLHPT
Trigger: GGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT...GGAGGTCCTGCTCCCTGACGAGGGCATGCAGAAATATGATAAGGAGCTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CAA 90 bp ACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAAGAGGCATGTGGCCTTaGTGGCTGGGGCCCTCAAAA +
Preference number: 3 (lower is better)
Translates to: TAVESPAPYLLVLHSMPQRGMWP*WLGPSK
Trigger: TTTTGAGGGCCCCAGCCACAAAGGCCACATGCCTCT...TTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR-3UTR CAA 90 bp CCTTGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATTGTGATGAGCCGCGGTaGATCTGCACCGAGTGCTCG +
Preference number: 3 (lower is better)
Translates to: PCFFLFCNLGTLQGCASHCDEPR*ICTECS
Trigger: CGAGCACTCGGTGCAGATCAACCGCGGCTCATCACA...ATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR GCA 72 bp TTCTTCCCTAGCCTCTCTGTCTGCAGGTCACACTCATaGAGGATGCGCTCACAGTCCCTCATCTTGGTCTTG +
Preference number: 3 (lower is better)
Translates to: FFPSLSVCRSHS*RMRSQSLILVL
Trigger: CAAGACCAAGATGAGGGACTGTGAGCGCATCCTGCATGAGTGTGACCTGCAGACAGAGAGGCTAGGGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CAA 90 bp CACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATATACACTGAGCCGGAACTCCATGTACTaGCGGAGCAAAGCCTCCGAC +
Preference number: 3 (lower is better)
Translates to: HLHPTFWSSIQCHKYTLSRNSMY*RSKASD
Trigger: GTCGGAGGCTTTGCTCCGCAAGTACATGGAGTTCCG...GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR TCA 72 bp ACCCCACATAGGCTCCTCCTAATCATGTACAGCTGTTaGGTCACCTGCACCCTACCTTCTGGTCCTCCATTC +
Preference number: 3 (lower is better)
Translates to: TPHRLLLIMYSC*VTCTLPSGPPF
Trigger: GAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGATTAGGAGGAGCCTATGTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR TCA 72 bp CCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTaGATTGTCTGGGTCTCCAGAAGAGAGTCCAACCCC +
Preference number: 3 (lower is better)
Translates to: PSKDSHCQKSGD*IVWVSRRESNP
Trigger: GGGGTTGGACTCTCTTCTGGAGACCCAGACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR GCA 72 bp AACTCCATGTACTTGCGGAGCAAAGCCTCCGACTTCTaGAAGTCAAAATTCCGAGCTCGGAGCCAGCGTAGA +
Preference number: 3 (lower is better)
Translates to: NSMYLRSKASDF*KSKFRARSQRR
Trigger: TCTACGCTGGCTCCGAGCTCGGAATTTTGACTTGCAGAAGTCGGAGGCTTTGCTCCGCAAGTACATGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CAA 90 bp GAGAACTGCCACCTGAGAACGCAGCCTGGAAATAGGATCTCGTATTCCACTTGGTGGTACCCTCCAAGGTaGTGCCTCTCATACCTTTCT +
Preference number: 3 (lower is better)
Translates to: ENCHLRTQPGNRISYSTWWYPPR*CLSYLS
Trigger: AGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCA...CCAAGTGGAATACGAGATCCTATTTCCAGGCTGCGTTCTCAGGTGGCAGTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CAA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTTGGTACCCTCCAAGGTaGTGCCTCTCATACCTTTCT +
Preference number: 3 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGWYPPR*CLSYLS
Trigger: AGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCA...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CAA 90 bp TCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGTGGTACCCTCCAAGGTaGTGCCTCTCATACCTTTCT +
Preference number: 3 (lower is better)
Translates to: SCTAVESPAPYLLVLHSMWYPPR*CLSYLS
Trigger: AGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCA...CATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CAA 90 bp CACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATATACACTGAGCTGGTACCCTCCAAGGTaGTGCCTCTCATACCTTTCT +
Preference number: 3 (lower is better)
Translates to: HLHPTFWSSIQCHKYTLSWYPPR*CLSYLS
Trigger: AGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCA...GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CAA 90 bp CCTTGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATTGGTACCCTCCAAGGTaGTGCCTCTCATACCTTTCT +
Preference number: 3 (lower is better)
Translates to: PCFFLFCNLGTLQGCASHWYPPR*CLSYLS
Trigger: AGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCA...ATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CAA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTTCCTCTTCTGCAACCTaGGTACCCTCCAAGGTTGTG +
Preference number: 3 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPSSSAT*VPSKVV
Trigger: CACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGA...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CAA 90 bp ACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAAATCTGGAGACTGAATaGTCTGGGTCTCCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: TAVESPAPYLLVLHSMPQNLETE*SGSPEE
Trigger: CTCTTCTGGAGACCCAGACAATTCAGTCTCCAGATT...TTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR CCA 72 bp TCAGTCCCAGGCCCTCACAGTCAAATATCATCACGATaGTCTCAATCTTCTTCCCTAGCCTCTCTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: SVPGPHSQISSR*SQSSSLASLSA
Trigger: TGCAGACAGAGAGGCTAGGGAAGAAGATTGAGACCATCGTGATGATATTTGACTGTGAGGGCCTGGGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CAA 90 bp CAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAACATGACACCCACTTCTaGCCTTTACCCTTGCTTTTT +
Preference number: 3 (lower is better)
Translates to: QLLSHLHPTFWSSIQCHKHDTHF*PLPLLF
Trigger: AAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATG...TTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR TCA 72 bp ATGGGAAAAAGAATTAACTGGAGACCACGTAGGGGGTaGGTCCTCTTACACACAGGCCAGTTACTCACACAG +
Preference number: 3 (lower is better)
Translates to: MGKRINWRPRRG*VLLHTGQLLTQ
Trigger: CTGTGTGAGTAACTGGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403066.5
3UTR-3UTR CAA 90 bp CACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATATACACTGAGCCATGACACCCACTTCTaGCCTTTACCCTTGCTTTTT +
Preference number: 3 (lower is better)
Translates to: HLHPTFWSSIQCHKYTLSHDTHF*PLPLLF
Trigger: AAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATG...GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CAA 90 bp CCCACAGGGAACAGTTTGGTAGCTTTCACGATGAGCATGAACTTCAGGGTCTCTCATGACACCCACTTCTaGCCTTTACCCTTGCTTTTT +
Preference number: 3 (lower is better)
Translates to: PTGNSLVAFTMSMNFRVSHDTHF*PLPLLF
Trigger: AAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATG...AGAGACCCTGAAGTTCATGCTCATCGTGAAAGCTACCAAACTGTTCCCTGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CAA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAATCCTCTTCTGCAACCTaGGTACCCTCCAAGGTTGTG +
Preference number: 3 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQSSSAT*VPSKVV
Trigger: CACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGA...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CAA 90 bp CTGCCTTTGCTTCCAGGAAAGTCCCTAAAACATAAGCTATGTGCAACAAGGGAAAATCATGTACAGCTGTaGAGTCACCTGCACCCTACC +
Preference number: 3 (lower is better)
Translates to: LPLLPGKSLKHKLCATRENHVQL*SHLHPT
Trigger: GGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT...TTCCCTTGTTGCACATAGCTTATGTTTTAGGGACTTTCCTGGAAGCAAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR-3UTR CAA 90 bp TTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCAAATCATGTACAGCTGTaGAGTCACCTGCACCCTACC +
Preference number: 3 (lower is better)
Translates to: LDMSPTQVAHSHTEGIQANHVQL*SHLHPT
Trigger: GGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT...TGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CAA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATAATCTGGAGACTGAATaGTCTGGGTCTCCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: TESGGLTINFREGGSVGYNLETE*SGSPEE
Trigger: CTCTTCTGGAGACCCAGACAATTCAGTCTCCAGATT...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR-3UTR CAA 90 bp GCTAGGGGATTCATTTTGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTCCTCTTCTGCAACCTaGGTACCCTCCAAGGTTGTG +
Preference number: 3 (lower is better)
Translates to: ARGFILLFIEFHDTHFLPSSSAT*VPSKVV
Trigger: CACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGA...AGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCAAAATGAATCCCCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CAA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATCATGACACCCACTTCTaGCCTTTACCCTTGCTTTTT +
Preference number: 3 (lower is better)
Translates to: TESGGLTINFREGGSVGYHDTHF*PLPLLF
Trigger: AAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATG...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CAA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAAATCATGTACAGCTGTaGAGTCACCTGCACCCTACC +
Preference number: 3 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQNHVQL*SHLHPT
Trigger: GGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
3UTR-3UTR CAA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATCCCACAGGGAACAGTTaGGTAGCTTTCACGATGAGC +
Preference number: 3 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHPTGNS*VAFTMS
Trigger: GCTCATCGTGAAAGCTACCAAACTGTTCCCTGTGGG...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
3UTR-3UTR CAA 90 bp CTGCCTTTGCTTCCAGGAAAGTCCCTAAAACATAAGCTATGTGCAACAAGGGAACATGACACCCACTTCTaGCCTTTACCCTTGCTTTTT +
Preference number: 3 (lower is better)
Translates to: LPLLPGKSLKHKLCATREHDTHF*PLPLLF
Trigger: AAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATG...TTCCCTTGTTGCACATAGCTTATGTTTTAGGGACTTTCCTGGAAGCAAAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
3UTR-3UTR CAA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATAATCATGTACAGCTGTaGAGTCACCTGCACCCTACC +
Preference number: 3 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHNHVQL*SHLHPT
Trigger: GGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCAACTCGGCCGCTCATaGTGCTGGCTGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIQLGRS*CWLGLE
Trigger: CTCAAGCCCCAGCCAGCACCATGAGCGGCCGAGTTG...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCGGCATAGGACTCCCTTaGGAGAGGGGGTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIGIGLP*ERGWWS
Trigger: GCTCCACCACCCCCTCTCCCAAGGGAGTCCTATGCC...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403066.5
3UTR CAA 72 bp TTCCTCCTGCCCTCTCTGCCCATGACCAAGCCTCCCTaGGCCAGCTGTGCACCTGGTAAGGCCGCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: FLLPSLPMTKPP*ASCAPGKAAPG
Trigger: TCCCGGAGCGGCCTTACCAGGTGCACAGCTGGCCAAGGGAGGCTTGGTCATGGGCAGAGAGGGCAGGAGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCACCGAGTGCTCGTACTaGGTCTTCACCTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: EARAPQPGQTPGAGLTPITECSY*VFTWSR
Trigger: GCGGGACCAGGTGAAGACTCAGTACGAGCACTCGGT...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCGCTCTCTTGGCCTCCTaGGCAGAGCTTGGCATGCAG +
Preference number: 4 (lower is better)
Translates to: GSPARPNPRCRAHSYPALALLAS*AELGMQ
Trigger: CTGCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGC...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCTTTGGGGTTCCCATCTaGGTCAGTCAGGGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GSPARPNPRCRAHSYPALFGVPI*VSQGAP
Trigger: GGGGGCACCCTGACTGACCCAGATGGGAACCCCAAA...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCGTCCTGCTTGGTGACTaGGAAGAGCAACCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GSPARPNPRCRAHSYPALVLLGD*EEQPLG
Trigger: CCCAAGGGGTTGCTCTTCTCAGTCACCAAGCAGGAC...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCGCAGGTCCTGCTTGGTaGCTGAGAAGAGCAACCCCT +
Preference number: 4 (lower is better)
Translates to: GSPARPNPRCRAHSYPALAGPAW*LRRATP
Trigger: AGGGGTTGCTCTTCTCAGTCACCAAGCAGGACCTGC...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCCGGCCTCTGAGCAGGTaGGGTTCCCATCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACRPLSR*GSHPRA
Trigger: TGCCCGAGGATGGGAACCTCACCTGCTCAGAGGCCG...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR GCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCCTCGGCCGCTCATGGTaGTGGCTGGGGCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACLGRSW*WLGLEE
Trigger: CTCCTCAAGCCCCAGCCAGCACCATGAGCGGCCGAG...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCCCAGGCATGTACTTCTaGATCACCTCTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GSPARPNPRCRAHSYPALPGMYF*ITSGGC
Trigger: GCAGCCCCCAGAGGTGATCCAGAAGTACATGCCTGG...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCCTCTTAGAAGCAGCATaGCAAGGCGGTCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GSPARPNPRCRAHSYPALLLEAA*QGGQEP
Trigger: GGGCTCCTGACCGCCTTGCCATGCTGCTTCTAAGAG...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCGATCAAGTGGCCCAATaGTGTCATACCACACGGGGC +
Preference number: 4 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIDQVAQ*CHTTRG
Trigger: GCCCCGTGTGGTATGACATCATTGGGCCACTTGATC...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCGGCAGGAGAATTGCTTaGACCTTGGCCAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GSPARPNPRCRAHSYPALGRRIA*TLARVS
Trigger: AGAGACCCTGGCCAAGGTTCAAGCAATTCTCCTGCC...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCTTTCCTCATAGCCTGTaGGTCACTCTGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GSPARPNPRCRAHSYPALFPHSL*VTLLGA
Trigger: GGCACCCAGCAGAGTGACTCACAGGCTATGAGGAAA...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR GCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCCTGGGTCAGTCAGGGTaGCCCCAAACTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACLGQSG*PQTGQA
Trigger: TGCCTGCCCAGTTTGGGGGCACCCTGACTGACCCAG...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCGCACGTACATGGACTTaGGGATCTCCCCGCCATAGT +
Preference number: 4 (lower is better)
Translates to: GSPARPNPRCRAHSYPALARTWT*GSPRHS
Trigger: ACTATGGCGGGGAGATCCCCAAGTCCATGTACGTGC...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCTGGGAGAGGGGGTGGTaGAGCAAGGGCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACWERGW*SKGLPP
Trigger: AGGAGGAAGGCCCTTGCTCCACCACCCCCTCTCCCA...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCTCAGGAATGGCTTCATaGGGTTGTAGCCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: EARAPQPGQTPGAGLTPISGMAS*GCSPQG
Trigger: TCCCTGTGGGCTACAACCTCATGAAGCCATTCCTGA...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR GCA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCGTCTTGAGCAGGTCCTaGTTGGTGACTGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIVLSRS*LVTEKS
Trigger: GCTCTTCTCAGTCACCAAGCAGGACCTGCTCAAGAC...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR GCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCGCCTGTGAGTCACTCTaGTGGGTGCCCTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACACESL*WVPSDS
Trigger: GCTGTCAGAGGGCACCCAGCAGAGTGACTCACAGGC...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCCTTCTGGATCACCTCTaGGGGCTGCCAATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: GSPARPNPRCRAHSYPALLLDHL*GLPIKD
Trigger: ATCCTTGATTGGCAGCCCCCAGAGGTGATCCAGAAG...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCAGGGTGCCCCCAAACTaGGCAGGCAGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACRVPPN*AGSSSG
Trigger: TCCTGAGGAACTGCCTGCCCAGTTTGGGGGCACCCT...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCATGAGAACTGCCACCTaGGAACGCAGCCTGGAAATA +
Preference number: 4 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIMRTAT*ERSLEI
Trigger: TATTTCCAGGCTGCGTTCTCAGGTGGCAGTTCTCAT...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp ACCAGGATCCCAGGTCACCCATTTCTCTCCCTTGACCGTCACAGTGCATCTGGGAGTCTTGTCGCAGGTTaGGCAGGGGCCTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TRIPGHPFLSLDRHSASGSLVAG*AGASWG
Trigger: ACCCCAGGAGGCCCCTGCTCAACCTGCGACAAGACT...CCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCTCCCCCAATGAGATCTaGAGCCACCAGGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACSPNEI*SHQDPR
Trigger: CCTGGGATCCTGGTGGCTTCAGATCTCATTGGGGGA...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR GCA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCATCACCTCTGGGGGCTaGCAATCAAGGATATGGTCA +
Preference number: 4 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIITSGG*QSRIWS
Trigger: TGACCATATCCTTGATTGGCAGCCCCCAGAGGTGAT...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp ACCAGGATCCCAGGTCACCCATTTCTCTCCCTTGACCGTCACAGTGCATCTGGGGCTCATGGTGCTGGCTaGGGCTTGAGGAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: TRIPGHPFLSLDRHSASGAHGAG*GLRSGG
Trigger: GCCACCACTCCTCAAGCCCCAGCCAGCACCATGAGC...CCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCCCCTTGGGATCAAGTaGCCCAATGATGTCATACCA +
Preference number: 4 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIPLGIK*PNDVIP
Trigger: TGGTATGACATCATTGGGCCACTTGATCCCAAGGGG...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp ACCAGGATCCCAGGTCACCCATTTCTCTCCCTTGACCGTCACAGTGCATCTGGGGGTCCCGCACGTACATaGACTTGGGGATCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: TRIPGHPFLSLDRHSASGGPART*TWGSPR
Trigger: GCGGGGAGATCCCCAAGTCCATGTACGTGCGGGACC...CCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCTGTGAGTCACTCTGCTaGGTGCCCTCTGACAGCCCT +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACCESLC*VPSDSP
Trigger: AGGGCTGTCAGAGGGCACCCAGCAGAGTGACTCACA...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCTGCTCCTTCCCCCAATaGGATCTGAAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACCSFPQ*DLKPPG
Trigger: TCCTGGTGGCTTCAGATCTCATTGGGGGAAGGAGCA...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR GCA 90 bp GTGGCTGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGTCTCGGCCGCTCATGGTaGTGGCTGGGGCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VAGALKRQPLPEIWRLNCLGRSW*WLGLEE
Trigger: CTCCTCAAGCCCCAGCCAGCACCATGAGCGGCCGAG...ACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215812.9
CDS-3UTR GCA 90 bp GCCGCGGTTGATCTGCACCGAGTGCTCGTACTGAGTCTTCACCTGGTCCCGCACCACACTCATGCAGGATaGGCTCACAGTCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: AAVDLHRVLVLSLHLVPHHTHAG*AHSPSS
Trigger: AGATGAGGGACTGTGAGCGCATCCTGCATGAGTGTG...GTGCGGGACCAGGTGAAGACTCAGTACGAGCACTCGGTGCAGATCAACCGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR CCA 90 bp GCTGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGTCTGGGCCGCTCATGGTGCTaGCTGGGGCTTGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: AGALKRQPLPEIWRLNCLGRSWC*LGLEEW
Trigger: CCACTCCTCAAGCCCCAGCCAGCACCATGAGCGGCC...CAGACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215812.9
CDS-3UTR CCA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCGAGTTCTGTAGCTCATaGCTGCATATAATCACGGGC +
Preference number: 4 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIEFCSS*LHIITG
Trigger: GCCCGTGATTATATGCAGCCATGAGCTACAGAACTC...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp ACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAACGGCCTCTGAGCAGGTaGGGTTCCCATCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: TAVESPAPYLLVLHSMPQRPLSR*GSHPRA
Trigger: TGCCCGAGGATGGGAACCTCACCTGCTCAGAGGCCG...TTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTGAGGACCGGCCTCTGAGCAGGTaGGGTTCCCATCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: QPYGRNSSIHTCLRVGEDRPLSR*GSHPRA
Trigger: TGCCCGAGGATGGGAACCTCACCTGCTCAGAGGCCG...GTCCTCACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCCACACTCATGCAGGATaGGCTCACAGTCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACHTHAG*AHSPSS
Trigger: AGATGAGGGACTGTGAGCGCATCCTGCATGAGTGTG...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR GCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCCTGAGGCAGGAGAATTaGTTGAACCTTGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACLRQEN*LNLGQG
Trigger: ACCCTGGCCAAGGTTCAAGCAATTCTCCTGCCTCAG...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR GCA 90 bp ACCAGGATCCCAGGTCACCCATTTCTCTCCCTTGACCGTCACAGTGCATCTGGGAGGCCAAACCCCAGGTaGAGGGCTCACTCCTATCCT +
Preference number: 4 (lower is better)
Translates to: TRIPGHPFLSLDRHSASGRPNPR*RAHSYP
Trigger: AGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCT...CCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp TGGGTCTCCAGAAGAGAGTCCAACCCCACCACACATCTGCTCCTGTCCAAGGTGTGTGGCCTTTGTGGCTaGGGCCCTCAAAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: WVSRRESNPTTHLLLSKVCGLCG*GPQKTA
Trigger: GGCTGTCTTTTGAGGGCCCCAGCCACAAAGGCCACA...CACCTTGGACAGGAGCAGATGTGTGGTGGGGTTGGACTCTCTTCTGGAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCCCGTCACAGTGCATCTaGGGAGCCTTTCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACPSQCI*GAFQSC
Trigger: ACAAGACTGAAAGGCTCCCCAGATGCACTGTGACGG...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCCTGGGCTGCAGGTCTTaGCATCCTGAAGATACAAGC +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACLGCRS*HPEDTS
Trigger: GCTTGTATCTTCAGGATGCCAAGACCTGCAGCCCAG...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp ACCAGGATCCCAGGTCACCCATTTCTCTCCCTTGACCGTCACAGTGCATCTGGGGTCCGCACCATCAGATaGGAACTGCCACCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: TRIPGHPFLSLDRHSASGVRTIR*ELPPEN
Trigger: GTTCTCAGGTGGCAGTTCTCATCTGATGGTGCGGAC...CCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp AGTCAGGGTGCCCCCAAACTGGGCAGGCAGTTCCTCAGGACTGATGAGTTTCAGGTCCGCACCATCAGATaGGAACTGCCACCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: SQGAPKLGRQFLRTDEFQVRTIR*ELPPEN
Trigger: GTTCTCAGGTGGCAGTTCTCATCTGATGGTGCGGAC...CTGAAACTCATCAGTCCTGAGGAACTGCCTGCCCAGTTTGGGGGCACCCTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR GCA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTCTCGGCCGCTCATGGTaGTGGCTGGGGCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGLGRSW*WLGLEE
Trigger: CTCCTCAAGCCCCAGCCAGCACCATGAGCGGCCGAG...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
CDS-3UTR GCA 90 bp CCTTGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATCTCGGCCGCTCATGGTaGTGGCTGGGGCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PCFFLFCNLGTLQGCASHLGRSW*WLGLEE
Trigger: CTCCTCAAGCCCCAGCCAGCACCATGAGCGGCCGAG...ATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
CDS-3UTR GCA 90 bp ACCAGGATCCCAGGTCACCCATTTCTCTCCCTTGACCGTCACAGTGCATCTGGGTGCAGGTCACACTCATaGAGGATGCGCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: TRIPGHPFLSLDRHSASGCRSHS*RMRSQS
Trigger: GGACTGTGAGCGCATCCTGCATGAGTGTGACCTGCA...CCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp CCTTGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATGGCCGCTCATGGTGCTaGCTGGGGCTTGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PCFFLFCNLGTLQGCASHGRSWC*LGLEEW
Trigger: CCACTCCTCAAGCCCCAGCCAGCACCATGAGCGGCC...ATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
CDS-3UTR CCA 90 bp TGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGTCTGGGAGGGTGCCCCCAAACTaGGCAGGCAGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: WGPQKTATARNLETELSGRVPPN*AGSSSG
Trigger: TCCTGAGGAACTGCCTGCCCAGTTTGGGGGCACCCT...CCCAGACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp TGTGGCTGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGCCTATCAGAGGCATGTaGCCTTTGTGGCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CGWGPQKTATARNLETELPIRGM*PLWLGP
Trigger: GGGCCCCAGCCACAAAGGCCACATGCCTCTGATAGG...CAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCCATTTTCGTACCATTTaGTATGCCATCACTTGCGAG +
Preference number: 4 (lower is better)
Translates to: GSPARPNPRCRAHSYPALHFRTI*YAITCE
Trigger: CTCGCAAGTGATGGCATACCAAATGGTACGAAAATG...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403066.5
3UTR CAA 72 bp AAGCCACCAGGATCCCAGGTCACCCATTTCTCTCCCTaGACCGTCACAGTGCATCTGGGGAGCCTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: KPPGSQVTHFSP*TVTVHLGSLSV
Trigger: GACTGAAAGGCTCCCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp CTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTCGGCCTCTGAGCAGGTaGGGTTCCCATCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: LFPLLQPWYPPRLCLSYLRPLSR*GSHPRA
Trigger: TGCCCGAGGATGGGAACCTCACCTGCTCAGAGGCCG...AAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp ACCAGGATCCCAGGTCACCCATTTCTCTCCCTTGACCGTCACAGTGCATCTGGGCCATCAGATGAGAACTaGCACCTGAGAACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TRIPGHPFLSLDRHSASGPSDEN*HLRTQP
Trigger: AGGCTGCGTTCTCAGGTGGCAGTTCTCATCTGATGG...CCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTGCTCATGGTGCTGGCTaGGGCTTGAGGAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGAHGAG*GLRSGG
Trigger: GCCACCACTCCTCAAGCCCCAGCCAGCACCATGAGC...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215812.9
CDS-3UTR CCA 90 bp CTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTTGATGGCCGCTCATGGTGCTaGCTGGGGCTTGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LFCNLGTLQGCASHTFLDGRSWC*LGLEEW
Trigger: CCACTCCTCAAGCCCCAGCCAGCACCATGAGCGGCC...ATCAAGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
CDS-3UTR CCA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTCAACTCGGCCGCTCATaGTGCTGGCTGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGQLGRS*CWLGLE
Trigger: CTCAAGCCCCAGCCAGCACCATGAGCGGCCGAGTTG...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
CDS-3UTR CCA 90 bp CACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATATACACTGAGCCAACTCGGCCGCTCATaGTGCTGGCTGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: HLHPTFWSSIQCHKYTLSQLGRS*CWLGLE
Trigger: CTCAAGCCCCAGCCAGCACCATGAGCGGCCGAGTTG...GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
CDS-3UTR CCA 90 bp GGTCTCCAGAAGAGAGTCCAACCCCACCACACATCTGCTCCTGTCCAAGGTGCTCGTTTTCTCGGAACTTaGCCAGGGTCTCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GLQKRVQPHHTSAPVQGARFLGT*PGSLPV
Trigger: AACAGGCAGAGACCCTGGCCAAGTTCCGAGAAAACG...AGCACCTTGGACAGGAGCAGATGTGTGGTGGGGTTGGACTCTCTTCTGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215812.9
CDS-3UTR CCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCAGGCCAAAGAACTCCTaGTACACTTCTACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACRPKNS*YTSTRG
Trigger: ACCTCTGGTAGAAGTGTACCAGGAGTTCTTTGGCCT...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp CAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTGAGGACTTTGGGGTTCCCATCTaGGTCAGTCAGGGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: QPYGRNSSIHTCLRVGEDFGVPI*VSQGAP
Trigger: GGGGGCACCCTGACTGACCCAGATGGGAACCCCAAA...GTCCTCACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp CCATCAGATGAGAACTGCCACCTGAGAACGCAGCCTGGAAATAGGATCTCGTATGGTCCCGCACGTACATaGACTTGGGGATCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PSDENCHLRTQPGNRISYGPART*TWGSPR
Trigger: GCGGGGAGATCCCCAAGTCCATGTACGTGCGGGACC...ATACGAGATCCTATTTCCAGGCTGCGTTCTCAGGTGGCAGTTCTCATCTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR CCA 90 bp GCTGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGTCTGTGTGGCCTTTGTGGCTaGGGCCCTCAAAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: AGALKRQPLPEIWRLNCLCGLCG*GPQKTA
Trigger: GGCTGTCTTTTGAGGGCCCCAGCCACAAAGGCCACA...CAGACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCCCTTGGGAGAGGGGGTaGTGGAGCAAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQAPWERG*WSKGLP
Trigger: AGGAAGGCCCTTGCTCCACCACCCCCTCTCCCAAGG...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCGTGCTGGCTGGGGCTTaGGGAGTGGTGGCCACTATA +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQAVLAGA*GVVATI
Trigger: TATAGTGGCCACCACTCCTCAAGCCCCAGCCAGCAC...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp CTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGACCGAGTGCTCGTACTaGGTCTTCACCTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: LTNVTESGGLTINFREGGTECSY*VFTWSR
Trigger: GCGGGACCAGGTGAAGACTCAGTACGAGCACTCGGT...CCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp TCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGGTGATGAGCCGCGGTTaGTCTGCACCGAGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: SCTAVESPAPYLLVLHSMVMSRG*SAPSAR
Trigger: ACGAGCACTCGGTGCAGATCAACCGCGGCTCATCAC...CATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTGTGATGAGCCGCGGTTaGTCTGCACCGAGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGVMSRG*SAPSAR
Trigger: ACGAGCACTCGGTGCAGATCAACCGCGGCTCATCAC...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCGTGATGAGCCGCGGTTaGTCTGCACCGAGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQAVMSRG*SAPSAR
Trigger: ACGAGCACTCGGTGCAGATCAACCGCGGCTCATCAC...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp AGGGCATCTCTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCCGGCCTCTGAGCAGGTaGGGTTCCCATCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: RASLSVLTNVTESGGLTIRPLSR*GSHPRA
Trigger: TGCCCGAGGATGGGAACCTCACCTGCTCAGAGGCCG...GATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAGAGATGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTTGATCTGGGTCAGTCAGGGTaGCCCCAAACTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LFCNLGTLQGCASHTFLDLGQSG*PQTGQA
Trigger: TGCCTGCCCAGTTTGGGGGCACCCTGACTGACCCAG...ATCAAGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCTTGGCATGCAGTAGATaGTCAGTAAACACTAAACAA +
Preference number: 4 (lower is better)
Translates to: EARAPQPGQTPGAGLTPILACSR*SVNTKQ
Trigger: TTGTTTAGTGTTTACTGAGCATCTACTGCATGCCAA...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR GCA 90 bp ACCAGGATCCCAGGTCACCCATTTCTCTCCCTTGACCGTCACAGTGCATCTGGGGGGTCTTCTGCTGGTTaGTCTAGTCTTGCTACTTGG +
Preference number: 4 (lower is better)
Translates to: TRIPGHPFLSLDRHSASGGSSAG*SSLATW
Trigger: CCAAGTAGCAAGACTAGAGCAACCAGCAGAAGACCC...CCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCAAATATCATCACGATaGTCTCAATCTTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIQISSR*SQSSSL
Trigger: TAGGGAAGAAGATTGAGACCATCGTGATGATATTTG...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp CCTTGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATTTTGGGGTTCCCATCTaGGTCAGTCAGGGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: PCFFLFCNLGTLQGCASHFGVPI*VSQGAP
Trigger: GGGGGCACCCTGACTGACCCAGATGGGAACCCCAAA...ATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGGTCCCGCACGTACATaGACTTGGGGATCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPGPART*TWGSPR
Trigger: GCGGGGAGATCCCCAAGTCCATGTACGTGCGGGACC...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp AGTGGGTTAGGGTGGGAAGCTGAGCGTGCAAGTCAGACAAAGCCTGATGTAGGCCTGCACCCTACCTTCTaGTCCTCCATTCAATGCCAC +
Preference number: 4 (lower is better)
Translates to: SGLGWEAERASQTKPDVGLHPTF*SSIQCH
Trigger: GTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAG...GCCTACATCAGGCTTTGTCTGACTTGCACGCTCAGCTTCCCACCCTAACCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp TGTGGCTGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGCCGTGTCCCTTTCTCTaGGGGCTGCCAATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: CGWGPQKTATARNLETELPCPFL*GLPIKD
Trigger: ATCCTTGATTGGCAGCCCCCAGAGAAAGGGACACGG...CAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540910.5
CDS-3UTR TCA 90 bp CTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTTGATGTGCTGGCTGGGGCTTaGGGAGTGGTGGCCACTATA +
Preference number: 4 (lower is better)
Translates to: LFCNLGTLQGCASHTFLDVLAGA*GVVATI
Trigger: TATAGTGGCCACCACTCCTCAAGCCCCAGCCAGCAC...ATCAAGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215812.9
CDS-3UTR TCA 90 bp CCTTGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATGTCCTGCTTGGTGACTaGGAAGAGCAACCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PCFFLFCNLGTLQGCASHVLLGD*EEQPLG
Trigger: CCCAAGGGGTTGCTCTTCTCAGTCACCAAGCAGGAC...ATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CAGGGTCTCTGGGTAATTCTCTTCAAGGAGGCCAAAGAACTCCTGGTACACTTCGCAGGTCCTGCTTGGTaGCTGAGAAGAGCAACCCCT +
Preference number: 4 (lower is better)
Translates to: QGLWVILFKEAKELLVHFAGPAW*LRRATP
Trigger: AGGGGTTGCTCTTCTCAGTCACCAAGCAGGACCTGC...GAAGTGTACCAGGAGTTCTTTGGCCTCCTTGAAGAGAATTACCCAGAGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR TCA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTACCGAGTGCTCGTACTaGGTCTTCACCTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPTECSY*VFTWSR
Trigger: GCGGGACCAGGTGAAGACTCAGTACGAGCACTCGGT...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp ACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAGTCCGCACCATCAGATaGGAACTGCCACCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: TAVESPAPYLLVLHSMPQVRTIR*ELPPEN
Trigger: GTTCTCAGGTGGCAGTTCTCATCTGATGGTGCGGAC...TTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp TGGGTCTCCAGAAGAGAGTCCAACCCCACCACACATCTGCTCCTGTCCAAGGTGCCACCTAGACAGGGGTaGGCTCCTTATCATATTTCT +
Preference number: 4 (lower is better)
Translates to: WVSRRESNPTTHLLLSKVPPRQG*APYHIS
Trigger: AGAAATATGATAAGGAGCTCACCCCTGTCTAGGTGG...CACCTTGGACAGGAGCAGATGTGTGGTGGGGTTGGACTCTCTTCTGGAGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR TCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCAGACCACGTAGGGGGTaGGTCCTCTTACACACAGGC +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQARPRRG*VLLHTG
Trigger: GCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCT...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR GCA 90 bp CAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATGCAGGTCACACTCATaGAGGATGCGCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: QLLSHLHPTFWSSIQCHKCRSHS*RMRSQS
Trigger: GGACTGTGAGCGCATCCTGCATGAGTGTGACCTGCA...TTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp TTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTGGGTCAGTCAGGGTaGCCCCAAACTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: FFLFCNLGTLQGCASHTFLGQSG*PQTGQA
Trigger: TGCCTGCCCAGTTTGGGGGCACCCTGACTGACCCAG...AAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp TGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGTCTGGGCCATCAGATGAGAACTaGCACCTGAGAACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WGPQKTATARNLETELSGPSDEN*HLRTQP
Trigger: AGGCTGCGTTCTCAGGTGGCAGTTCTCATCTGATGG...CCCAGACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR GCA 90 bp CTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGAAAGCTGAGGTCCTaGAGGGGAGGGCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LTNVTESGGLTINFREGGRKLRS*RGGPCS
Trigger: TGAGCAAGGCCCTCCCCTGCAGGACCTCAGCTTTCT...CCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS-3UTR GCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCGGCTCACTCCTATCCTaGTCTCTTGGCCTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQAGSLLS*SLGLLS
Trigger: GCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCC...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCTATGGTCAATATCCATaGTCTTCCGGAACTCCATGT +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACYGQYP*SSGTPC
Trigger: ACATGGAGTTCCGGAAGACCATGGATATTGACCATA...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp CTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGCCAGGCATGTACTTCTaGATCACCTCTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LTNVTESGGLTINFREGGPGMYF*ITSGGC
Trigger: GCAGCCCCCAGAGGTGATCCAGAAGTACATGCCTGG...CCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000434642.5
CDS-3UTR CCA 90 bp TCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCAGGCATGTACTTCTaGATCACCTCTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SCTAVESPAPYLLVLHSMPGMYF*ITSGGC
Trigger: GCAGCCCCCAGAGGTGATCCAGAAGTACATGCCTGG...CATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000434642.5
CDS-3UTR CCA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTAGGGTGCCCCCAAACTaGGCAGGCAGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPRVPPN*AGSSSG
Trigger: TCCTGAGGAACTGCCTGCCCAGTTTGGGGGCACCCT...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp CTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTTGATTTTGGGGTTCCCATCTaGGTCAGTCAGGGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LFCNLGTLQGCASHTFLDFGVPI*VSQGAP
Trigger: GGGGGCACCCTGACTGACCCAGATGGGAACCCCAAA...ATCAAGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp ACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAGCACGTACATGGACTTaGGGATCTCCCCGCCATAGT +
Preference number: 4 (lower is better)
Translates to: TAVESPAPYLLVLHSMPQARTWT*GSPRHS
Trigger: ACTATGGCGGGGAGATCCCCAAGTCCATGTACGTGC...TTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATGGTCCCGCACGTACATaGACTTGGGGATCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: TESGGLTINFREGGSVGYGPART*TWGSPR
Trigger: GCGGGGAGATCCCCAAGTCCATGTACGTGCGGGACC...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp AGTGGGTTAGGGTGGGAAGCTGAGCGTGCAAGTCAGACAAAGCCTGATGTAGGCATCTCGTATTCCACTTaGTGTGATGAGCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: SGLGWEAERASQTKPDVGISYST*CDEPRL
Trigger: CAACCGCGGCTCATCACACCAAGTGGAATACGAGAT...GCCTACATCAGGCTTTGTCTGACTTGCACGCTCAGCTTCCCACCCTAACCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR TCA 90 bp TCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGGATCAAGTGGCCCAATaGTGTCATACCACACGGGGC +
Preference number: 4 (lower is better)
Translates to: SCTAVESPAPYLLVLHSMDQVAQ*CHTTRG
Trigger: GCCCCGTGTGGTATGACATCATTGGGCCACTTGATC...CATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp AATCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAAGTCCTGCTTGGTGACTaGGAAGAGCAACCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: NHVQLLSHLHPTFWSSIQVLLGD*EEQPLG
Trigger: CCCAAGGGGTTGCTCTTCTCAGTCACCAAGCAGGAC...TTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATACCGAGTGCTCGTACTaGGTCTTCACCTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: TESGGLTINFREGGSVGYTECSY*VFTWSR
Trigger: GCGGGACCAGGTGAAGACTCAGTACGAGCACTCGGT...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATGTGATGAGCCGCGGTTaGTCTGCACCGAGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: TESGGLTINFREGGSVGYVMSRG*SAPSAR
Trigger: ACGAGCACTCGGTGCAGATCAACCGCGGCTCATCAC...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp ATGTGCAACAAGGGAAGTGGGTTAGGGTGGGAAGCTGAGCGTGCAAGTCAGACAATGAGAACTGCCACCTaGGAACGCAGCCTGGAAATA +
Preference number: 4 (lower is better)
Translates to: MCNKGSGLGWEAERASQTMRTAT*ERSLEI
Trigger: TATTTCCAGGCTGCGTTCTCAGGTGGCAGTTCTCAT...TGTCTGACTTGCACGCTCAGCTTCCCACCCTAACCCACTTCCCTTGTTGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR TCA 90 bp TCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGGGCAGGAGAATTGCTTaGACCTTGGCCAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SCTAVESPAPYLLVLHSMGRRIA*TLARVS
Trigger: AGAGACCCTGGCCAAGGTTCAAGCAATTCTCCTGCC...CATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401751.5
ENST00000402286.5
CDS-3UTR TCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCCCCATTTCTCTCCCTTaGCCGTCACAGTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQAPISLP*PSQCIW
Trigger: CCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGG...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp CTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTAGACAGAGGCTGCAGTaGGCTGAGATCGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: LFPLLQPWYPPRLCLSYLRQRLQ*AEIAPQ
Trigger: CTGTGGAGCGATCTCAGCTCACTGCAGCCTCTGTCT...AAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR GCA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAACTCGGCCGCTCATGGTaGTGGCTGGGGCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQLGRSW*WLGLEE
Trigger: CTCCTCAAGCCCCAGCCAGCACCATGAGCGGCCGAG...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
CDS-3UTR GCA 90 bp TCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGTGCAGGTCACACTCATaGAGGATGCGCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SCTAVESPAPYLLVLHSMCRSHS*RMRSQS
Trigger: GGACTGTGAGCGCATCCTGCATGAGTGTGACCTGCA...CATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCAAGGCCTACTTAGCTTaGATTTTCGTACCATTTGGT +
Preference number: 4 (lower is better)
Translates to: AGLTPILLSWPPEQSLACKAYLA*IFVPFG
Trigger: ACCAAATGGTACGAAAATGCAAGCTAAGTAGGCCTT...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp CAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTGAGGACCTTCTGGATCACCTCTaGGGGCTGCCAATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: QPYGRNSSIHTCLRVGEDLLDHL*GLPIKD
Trigger: ATCCTTGATTGGCAGCCCCCAGAGGTGATCCAGAAG...GTCCTCACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000434642.5
CDS-3UTR CCA 90 bp AGGGCATCTCTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAGGGTGCCCCCAAACTaGGCAGGCAGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RASLSVLTNVTESGGLTIRVPPN*AGSSSG
Trigger: TCCTGAGGAACTGCCTGCCCAGTTTGGGGGCACCCT...GATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAGAGATGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp GGTCTCCAGAAGAGAGTCCAACCCCACCACACATCTGCTCCTGTCCAAGGTGCTTCTTGGTTAAACATTTaGGGTTCCCATCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GLQKRVQPHHTSAPVQGASWLNI*GSHLGQ
Trigger: CTGACCCAGATGGGAACCCCAAATGTTTAACCAAGA...AGCACCTTGGACAGGAGCAGATGTGTGGTGGGGTTGGACTCTCTTCTGGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp GAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATAAAGGTCCCGCACGTACATaGACTTGGGGATCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: ESGGLTINFREGGSVGYKGPART*TWGSPR
Trigger: GCGGGGAGATCCCCAAGTCCATGTACGTGCGGGACC...TTTATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp CAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAACCTCTTCTGCAACCTTaGTACCCTCCAAGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: QLLSHLHPTFWSSIQCHKPLLQP*YPPRLC
Trigger: GCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGG...TTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp AATCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAAGGCATGTGGCCTTTGTaGCTGGGGCCCTCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: NHVQLLSHLHPTFWSSIQGMWPL*LGPSKD
Trigger: GTCTTTTGAGGGCCCCAGCCACAAAGGCCACATGCC...TTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGGCATGTGGCCTTTGTaGCTGGGGCCCTCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPGMWPL*LGPSKD
Trigger: GTCTTTTGAGGGCCCCAGCCACAAAGGCCACATGCC...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp CCTTGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATCCGTGTCCCTTTCTCTaGGGGCTGCCAATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: PCFFLFCNLGTLQGCASHPCPFL*GLPIKD
Trigger: ATCCTTGATTGGCAGCCCCCAGAGAAAGGGACACGG...ATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS-3UTR CCA 90 bp ACCAGGATCCCAGGTCACCCATTTCTCTCCCTTGACCGTCACAGTGCATCTGGGACAAAAATTAGTTACTaGCAGGGAGGGGTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: TRIPGHPFLSLDRHSASGTKISY*QGGVKA
Trigger: GGCCTTTACCCCTCCCTGCCAGTAACTAATTTTTGT...CCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCCCTATCCTGCTCTCTTaGCCTCCTGAGCAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQAPILLS*PPEQSL
Trigger: CAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGG...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATGTCCTGCTTGGTGACTaGGAAGAGCAACCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: TESGGLTINFREGGSVGYVLLGD*EEQPLG
Trigger: CCCAAGGGGTTGCTCTTCTCAGTCACCAAGCAGGAC...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATGCAGGTCCTGCTTGGTaGCTGAGAAGAGCAACCCCT +
Preference number: 4 (lower is better)
Translates to: TESGGLTINFREGGSVGYAGPAW*LRRATP
Trigger: AGGGGTTGCTCTTCTCAGTCACCAAGCAGGACCTGC...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp TTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTGCAGGTCCTGCTTGGTaGCTGAGAAGAGCAACCCCT +
Preference number: 4 (lower is better)
Translates to: FFLFCNLGTLQGCASHTFAGPAW*LRRATP
Trigger: AGGGGTTGCTCTTCTCAGTCACCAAGCAGGACCTGC...AAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp GAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATAAAACCGAGTGCTCGTACTaGGTCTTCACCTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: ESGGLTINFREGGSVGYKTECSY*VFTWSR
Trigger: GCGGGACCAGGTGAAGACTCAGTACGAGCACTCGGT...TTTATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTGGCAGGAGAATTGCTTaGACCTTGGCCAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LFPLLQPWYPPRLCLSYLGRRIA*TLARVS
Trigger: AGAGACCCTGGCCAAGGTTCAAGCAATTCTCCTGCC...AAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000401751.5
ENST00000402286.5
CDS-3UTR TCA 90 bp CTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTGGCAGGAGAATTGCTTaGACCTGGGAGACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LFPLLQPWYPPRLCLSYLGRRIA*TWETEA
Trigger: AGCCTCTGTCTCCCAGGTTCAAGCAATTCTCCTGCC...AAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR GCA 90 bp CACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATATACACTGAGCGTCTTGAGCAGGTCCTaGTTGGTGACTGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HLHPTFWSSIQCHKYTLSVLSRS*LVTEKS
Trigger: GCTCTTCTCAGTCACCAAGCAGGACCTGCTCAAGAC...GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAACTGGGTCAGTCAGGGTaGCCCCAAACTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQLGQSG*PQTGQA
Trigger: TGCCTGCCCAGTTTGGGGGCACCCTGACTGACCCAG...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGCTGGGTCAGTCAGGGTaGCCCCAAACTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LSVLTNVTESGGLTINFRLGQSG*PQTGQA
Trigger: TGCCTGCCCAGTTTGGGGGCACCCTGACTGACCCAG...CCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATATACACTGAGCCCATCAGATGAGAACTaGCACCTGAGAACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: HLHPTFWSSIQCHKYTLSPSDEN*HLRTQP
Trigger: AGGCTGCGTTCTCAGGTGGCAGTTCTCATCTGATGG...GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CCCACAGGGAACAGTTTGGTAGCTTTCACGATGAGCATGAACTTCAGGGTCTCTCCATCAGATGAGAACTaGCACCTGAGAACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PTGNSLVAFTMSMNFRVSPSDEN*HLRTQP
Trigger: AGGCTGCGTTCTCAGGTGGCAGTTCTCATCTGATGG...AGAGACCCTGAAGTTCATGCTCATCGTGAAAGCTACCAAACTGTTCCCTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR GCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCTTCCCTTCCTTGGTCTaGCCTAGGCCCTCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQAFPSLV*PRPSEY
Trigger: ATACTCAGAGGGCCTAGGGCAGACCAAGGAAGGGAA...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR GCA 90 bp AGGGCATCTCTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCCTGGGAGACAGAGGCTaGAGTGAGCTGAGATCGCTC +
Preference number: 4 (lower is better)
Translates to: RASLSVLTNVTESGGLTILGDRG*SELRSL
Trigger: GAGCGATCTCAGCTCACTGCAGCCTCTGTCTCCCAG...GATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAGAGATGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR CCA 90 bp GGGGTGAGCTCCTTATCATATTTCTGCATGCCCTCGTCAGGGAGCAGGACCTCCTATGGTCAATATCCATaGTCTTCCGGAACTCCATGT +
Preference number: 4 (lower is better)
Translates to: GVSSLSYFCMPSSGSRTSYGQYP*SSGTPC
Trigger: ACATGGAGTTCCGGAAGACCATGGATATTGACCATA...GGAGGTCCTGCTCCCTGACGAGGGCATGCAGAAATATGATAAGGAGCTCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR CCA 90 bp GCTGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGTCTGAGGCCAAAGAACTCCTaGTACACTTCTACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: AGALKRQPLPEIWRLNCLRPKNS*YTSTRG
Trigger: ACCTCTGGTAGAAGTGTACCAGGAGTTCTTTGGCCT...CAGACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp CTGCCTTTGCTTCCAGGAAAGTCCCTAAAACATAAGCTATGTGCAACAAGGGAAAGGGTGCCCCCAAACTaGGCAGGCAGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LPLLPGKSLKHKLCATRERVPPN*AGSSSG
Trigger: TCCTGAGGAACTGCCTGCCCAGTTTGGGGGCACCCT...TTCCCTTGTTGCACATAGCTTATGTTTTAGGGACTTTCCTGGAAGCAAAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp CCCACAGGGAACAGTTTGGTAGCTTTCACGATGAGCATGAACTTCAGGGTCTCTCCTCTTCTGCAACCTTaGTACCCTCCAAGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: PTGNSLVAFTMSMNFRVSPLLQP*YPPRLC
Trigger: GCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGG...AGAGACCCTGAAGTTCATGCTCATCGTGAAAGCTACCAAACTGTTCCCTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR CCA 90 bp CTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGCTGCACCCTACCTTCTaGTCCTCCATTCAATGCCAC +
Preference number: 4 (lower is better)
Translates to: LTNVTESGGLTINFREGGLHPTF*SSIQCH
Trigger: GTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAG...CCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp GCTGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGTCTGCCACTGCCAGAAATCTaGAGACTGAATTGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: AGALKRQPLPEIWRLNCLPLPEI*RLNCLG
Trigger: ACCCAGACAATTCAGTCTCCAGATTTCTGGCAGTGG...CAGACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp CAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAACTCACAGAGGGTAAATaGCAAAGCCAGGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QLLSHLHPTFWSSIQCHKLTEGK*QSQVSA
Trigger: TGCTGAGACCTGGCTTTGCCATTTACCCTCTGTGAG...TTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS-3UTR CCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCCTCCTGAGCAGAGCTTaGCATGCAGTAGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQALLSRA*HAVDAQ
Trigger: CTGAGCATCTACTGCATGCCAAGCTCTGCTCAGGAG...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp CACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATATACACTGAGCACAGAGACTCCATCTTaGCCAGGGTCTCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: HLHPTFWSSIQCHKYTLSTETPS*PGSLPV
Trigger: AACAGGCAGAGACCCTGGCCAAGATGGAGTCTCTGT...GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR TCA 90 bp CTGCCTTTGCTTCCAGGAAAGTCCCTAAAACATAAGCTATGTGCAACAAGGGAAGTCCTGCTTGGTGACTaGGAAGAGCAACCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LPLLPGKSLKHKLCATREVLLGD*EEQPLG
Trigger: CCCAAGGGGTTGCTCTTCTCAGTCACCAAGCAGGAC...TTCCCTTGTTGCACATAGCTTATGTTTTAGGGACTTTCCTGGAAGCAAAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR TCA 90 bp GAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATAAAGCAGGTCCTGCTTGGTaGCTGAGAAGAGCAACCCCT +
Preference number: 4 (lower is better)
Translates to: ESGGLTINFREGGSVGYKAGPAW*LRRATP
Trigger: AGGGGTTGCTCTTCTCAGTCACCAAGCAGGACCTGC...TTTATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTTCAGGAATGGCTTCATaGGGTTGTAGCCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPSGMAS*GCSPQG
Trigger: TCCCTGTGGGCTACAACCTCATGAAGCCATTCCTGA...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGGTGATGAGCCGCGGTTaGTCTGCACCGAGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: LSVLTNVTESGGLTINFRVMSRG*SAPSAR
Trigger: ACGAGCACTCGGTGCAGATCAACCGCGGCTCATCAC...CCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp AGGGCATCTCTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCGTCCGCACCATCAGATaGGAACTGCCACCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: RASLSVLTNVTESGGLTIVRTIR*ELPPEN
Trigger: GTTCTCAGGTGGCAGTTCTCATCTGATGGTGCGGAC...GATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAGAGATGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGATCATGTACAGCTGTTaGGTCACCTGCACCCTACCT +
Preference number: 4 (lower is better)
Translates to: LTNVTESGGLTINFREGGIMYSC*VTCTLP
Trigger: AGGTAGGGTGCAGGTGACTCAACAGCTGTACATGAT...CCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTGAGGACCAGAAATCTGGAGACTaGATTGTCTGGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QPYGRNSSIHTCLRVGEDQKSGD*IVWVSR
Trigger: TCTGGAGACCCAGACAATTCAGTCTCCAGATTTCTG...GTCCTCACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR TCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCCAGGTCTTGGCATCCTaGAGATACAAGCAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQAQVLAS*RYKQEE
Trigger: CTCCTCTTGCTTGTATCTTCAGGATGCCAAGACCTG...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR GCA 90 bp CTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTTGATCACACTCATGCAGGATaGGCTCACAGTCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: LFCNLGTLQGCASHTFLDHTHAG*AHSPSS
Trigger: AGATGAGGGACTGTGAGCGCATCCTGCATGAGTGTG...ATCAAGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp AGGGCATCTCTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCTGCAGGTCACACTCATaGAGGATGCGCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: RASLSVLTNVTESGGLTICRSHS*RMRSQS
Trigger: GGACTGTGAGCGCATCCTGCATGAGTGTGACCTGCA...GATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAGAGATGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTTGATCCATCAGATGAGAACTaGCACCTGAGAACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LFCNLGTLQGCASHTFLDPSDEN*HLRTQP
Trigger: AGGCTGCGTTCTCAGGTGGCAGTTCTCATCTGATGG...ATCAAGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp GAGAACTGCCACCTGAGAACGCAGCCTGGAAATAGGATCTCGTATTCCACTTGGTATCATATTTCTGCATaGCCTCGTCAGGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ENCHLRTQPGNRISYSTWYHISA*PRQGAG
Trigger: TCCTGCTCCCTGACGAGGGCATGCAGAAATATGATA...CCAAGTGGAATACGAGATCCTATTTCCAGGCTGCGTTCTCAGGTGGCAGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR GCA 90 bp CAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATCCTTATCATATTTCTaGATGCCCTCGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QLLSHLHPTFWSSIQCHKSLSYF*MPSSGS
Trigger: GCTCCCTGACGAGGGCATGCAGAAATATGATAAGGA...TTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp GCTGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGTCTGTGCTTTTTCCTCTTCTaGAACCTTGGTACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: AGALKRQPLPEIWRLNCLCFFLF*NLGTLQ
Trigger: TTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCA...CAGACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR GCA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTTCAAGCATACACACCTaGCTTAGGGTAGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGSSIHT*LRVGED
Trigger: GTCCTCACCTACCCTAAGGCAGGTGTGTATGCTTGA...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CAGGGTCTCTGGGTAATTCTCTTCAAGGAGGCCAAAGAACTCCTGGTACACTTCTCAAGCATACACACCTaGCTTAGGGTAGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: QGLWVILFKEAKELLVHFSSIHT*LRVGED
Trigger: GTCCTCACCTACCCTAAGGCAGGTGTGTATGCTTGA...GAAGTGTACCAGGAGTTCTTTGGCCTCCTTGAAGAGAATTACCCAGAGACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR GCA 90 bp CTGCCTTTGCTTCCAGGAAAGTCCCTAAAACATAAGCTATGTGCAACAAGGGAAAGAAAGCTGAGGTCCTaGAGGGGAGGGCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LPLLPGKSLKHKLCATRERKLRS*RGGPCS
Trigger: TGAGCAAGGCCCTCCCCTGCAGGACCTCAGCTTTCT...TTCCCTTGTTGCACATAGCTTATGTTTTAGGGACTTTCCTGGAAGCAAAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540910.5
CDS-3UTR CCA 90 bp GCTAGGGGATTCATTTTGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTCAACTCGGCCGCTCATaGTGCTGGCTGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: ARGFILLFIEFHDTHFLPQLGRS*CWLGLE
Trigger: CTCAAGCCCCAGCCAGCACCATGAGCGGCCGAGTTG...AGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCAAAATGAATCCCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
CDS-3UTR CCA 90 bp GAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATAAACCAGGCATGTACTTCTaGATCACCTCTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ESGGLTINFREGGSVGYKPGMYF*ITSGGC
Trigger: GCAGCCCCCAGAGGTGATCCAGAAGTACATGCCTGG...TTTATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000434642.5
CDS-3UTR CCA 90 bp GAGAACTGCCACCTGAGAACGCAGCCTGGAAATAGGATCTCGTATTCCACTTGGAGGCCAAAGAACTCCTaGTACACTTCTACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ENCHLRTQPGNRISYSTWRPKNS*YTSTRG
Trigger: ACCTCTGGTAGAAGTGTACCAGGAGTTCTTTGGCCT...CCAAGTGGAATACGAGATCCTATTTCCAGGCTGCGTTCTCAGGTGGCAGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR CCA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAATTTGGGGTTCCCATCTaGGTCAGTCAGGGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQFGVPI*VSQGAP
Trigger: GGGGGCACCCTGACTGACCCAGATGGGAACCCCAAA...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp GCTAGGGGATTCATTTTGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTGGTCCCGCACGTACATaGACTTGGGGATCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: ARGFILLFIEFHDTHFLPGPART*TWGSPR
Trigger: GCGGGGAGATCCCCAAGTCCATGTACGTGCGGGACC...AGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCAAAATGAATCCCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCATCTCGTATTCCACTTaGTGTGATGAGCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQAISYST*CDEPRL
Trigger: CAACCGCGGCTCATCACACCAAGTGGAATACGAGAT...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp CTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTTGATCTGCACCCTACCTTCTaGTCCTCCATTCAATGCCAC +
Preference number: 4 (lower is better)
Translates to: LFCNLGTLQGCASHTFLDLHPTF*SSIQCH
Trigger: GTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAG...ATCAAGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCGAATTGCTTGAACCTTaGCCAGGGTCTCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQAELLEP*PGSLPV
Trigger: AACAGGCAGAGACCCTGGCCAAGGTTCAAGCAATTC...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCGCAGGAAGCACATCCTaGACGTTTTCTCGGAACTGT +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQAAGSTS*TFSRNC
Trigger: ACAGTTCCGAGAAAACGTCCAGGATGTGCTTCCTGC...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR TCA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTATGAGAACTGCCACCTaGGAACGCAGCCTGGAAATA +
Preference number: 4 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPMRTAT*ERSLEI
Trigger: TATTTCCAGGCTGCGTTCTCAGGTGGCAGTTCTCAT...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTTGATATGAGAACTGCCACCTaGGAACGCAGCCTGGAAATA +
Preference number: 4 (lower is better)
Translates to: LFCNLGTLQGCASHTFLDMRTAT*ERSLEI
Trigger: TATTTCCAGGCTGCGTTCTCAGGTGGCAGTTCTCAT...ATCAAGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CTGCCTTTGCTTCCAGGAAAGTCCCTAAAACATAAGCTATGTGCAACAAGGGAAGTCCGCACCATCAGATaGGAACTGCCACCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LPLLPGKSLKHKLCATREVRTIR*ELPPEN
Trigger: GTTCTCAGGTGGCAGTTCTCATCTGATGGTGCGGAC...TTCCCTTGTTGCACATAGCTTATGTTTTAGGGACTTTCCTGGAAGCAAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR TCA 90 bp TCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACCTAGACAGGGGTaGGCTCCTTATCATATTTCT +
Preference number: 4 (lower is better)
Translates to: SCTAVESPAPYLLVLHSMPPRQG*APYHIS
Trigger: AGAAATATGATAAGGAGCTCACCCCTGTCTAGGTGG...CATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTATCATGTACAGCTGTTaGGTCACCTGCACCCTACCT +
Preference number: 4 (lower is better)
Translates to: LFPLLQPWYPPRLCLSYLIMYSC*VTCTLP
Trigger: AGGTAGGGTGCAGGTGACTCAACAGCTGTACATGAT...AAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTGAGGACAAAGCCTCCGACTTCTaGAAGTCAAAATTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: QPYGRNSSIHTCLRVGEDKASDF*KSKFRA
Trigger: AGCTCGGAATTTTGACTTGCAGAAGTCGGAGGCTTT...GTCCTCACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTATCACCTCTGGGGGCTaGCAATCAAGGATATGGTCA +
Preference number: 4 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPITSGG*QSRIWS
Trigger: TGACCATATCCTTGATTGGCAGCCCCCAGAGGTGAT...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000434642.5
CDS-3UTR GCA 90 bp TTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCACACTCATGCAGGATaGGCTCACAGTCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: FFLFCNLGTLQGCASHTFHTHAG*AHSPSS
Trigger: AGATGAGGGACTGTGAGCGCATCCTGCATGAGTGTG...AAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CTGCCTTTGCTTCCAGGAAAGTCCCTAAAACATAAGCTATGTGCAACAAGGGAATGCAGGTCACACTCATaGAGGATGCGCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: LPLLPGKSLKHKLCATRECRSHS*RMRSQS
Trigger: GGACTGTGAGCGCATCCTGCATGAGTGTGACCTGCA...TTCCCTTGTTGCACATAGCTTATGTTTTAGGGACTTTCCTGGAAGCAAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR GCA 90 bp TTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCCATCAGATGAGAACTaGCACCTGAGAACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: FFLFCNLGTLQGCASHTFPSDEN*HLRTQP
Trigger: AGGCTGCGTTCTCAGGTGGCAGTTCTCATCTGATGG...AAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTTATCATATTTCTGCATaGCCTCGTCAGGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGYHISA*PRQGAG
Trigger: TCCTGCTCCCTGACGAGGGCATGCAGAAATATGATA...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTTCCTTATCATATTTCTaGATGCCCTCGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGSLSYF*MPSSGS
Trigger: GCTCCCTGACGAGGGCATGCAGAAATATGATAAGGA...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGTCCTTATCATATTTCTaGATGCCCTCGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LTNVTESGGLTINFREGGSLSYF*MPSSGS
Trigger: GCTCCCTGACGAGGGCATGCAGAAATATGATAAGGA...CCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATGCTTTTTCCTCTTCTaGAACCTTGGTACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: QLLSHLHPTFWSSIQCHKCFFLF*NLGTLQ
Trigger: TTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCA...TTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp TGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGTCTGGGATGACACCCACTTCTTaGCTTTACCCTTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: WGPQKTATARNLETELSGMTPTS*LYPCFF
Trigger: GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCAT...CCCAGACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR GCA 90 bp CTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCAAGCATACACACCTaGCTTAGGGTAGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LFPLLQPWYPPRLCLSYLSSIHT*LRVGED
Trigger: GTCCTCACCTACCCTAAGGCAGGTGTGTATGCTTGA...AAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTTGATTCAAGCATACACACCTaGCTTAGGGTAGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LFCNLGTLQGCASHTFLDSSIHT*LRVGED
Trigger: GTCCTCACCTACCCTAAGGCAGGTGTGTATGCTTGA...ATCAAGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATATGCCAGATGTGACTaGCTTTGCTTCCAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: QLLSHLHPTFWSSIQCHKYARCD*LCFQES
Trigger: ACTTTCCTGGAAGCAAAGGCAGTCACATCTGGCATA...TTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR GCA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTCCTTTCTCTGGGGGCTaGCAATCAAGGATATGGTCA +
Preference number: 4 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPPFSGG*QSRIWS
Trigger: TGACCATATCCTTGATTGGCAGCCCCCAGAGAAAGG...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS-3UTR CCA 90 bp TGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTTGCTTTTTCCAACTCGGCCGCTCATaGTGCTGGCTGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: CYLLSFMTPTSCLYPCFFQLGRS*CWLGLE
Trigger: CTCAAGCCCCAGCCAGCACCATGAGCGGCCGAGTTG...GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
CDS-3UTR CCA 90 bp GCTGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGTCTGTATGGTCAATATCCATaGTCTTCCGGAACTCCATGT +
Preference number: 4 (lower is better)
Translates to: AGALKRQPLPEIWRLNCLYGQYP*SSGTPC
Trigger: ACATGGAGTTCCGGAAGACCATGGATATTGACCATA...CAGACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp CTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTTGATCCCCTTGGGATCAAGTaGCCCAATGATGTCATACCA +
Preference number: 4 (lower is better)
Translates to: LFCNLGTLQGCASHTFLDPLGIK*PNDVIP
Trigger: TGGTATGACATCATTGGGCCACTTGATCCCAAGGGG...ATCAAGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp CTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTCCCCTTGGGATCAAGTaGCCCAATGATGTCATACCA +
Preference number: 4 (lower is better)
Translates to: LFPLLQPWYPPRLCLSYLPLGIK*PNDVIP
Trigger: TGGTATGACATCATTGGGCCACTTGATCCCAAGGGG...AAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp TCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGAGGCCAAAGAACTCCTaGTACACTTCTACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SCTAVESPAPYLLVLHSMRPKNS*YTSTRG
Trigger: ACCTCTGGTAGAAGTGTACCAGGAGTTCTTTGGCCT...CATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp CACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATATACACTGAGCAGGCCAAAGAACTCCTaGTACACTTCTACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: HLHPTFWSSIQCHKYTLSRPKNS*YTSTRG
Trigger: ACCTCTGGTAGAAGTGTACCAGGAGTTCTTTGGCCT...GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp ACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAATCTTGGTTAAACATTTaGGGTTCCCATCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TAVESPAPYLLVLHSMPQSWLNI*GSHLGQ
Trigger: CTGACCCAGATGGGAACCCCAAATGTTTAACCAAGA...TTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp TTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCAGCACGTACATGGACTTaGGGATCTCCCCGCCATAGT +
Preference number: 4 (lower is better)
Translates to: LDMSPTQVAHSHTEGIQAARTWT*GSPRHS
Trigger: ACTATGGCGGGGAGATCCCCAAGTCCATGTACGTGC...TGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp CTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTTGATATCTCGTATTCCACTTaGTGTGATGAGCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: LFCNLGTLQGCASHTFLDISYST*CDEPRL
Trigger: CAACCGCGGCTCATCACACCAAGTGGAATACGAGAT...ATCAAGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp AATCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAAATCTCGTATTCCACTTaGTGTGATGAGCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: NHVQLLSHLHPTFWSSIQISYST*CDEPRL
Trigger: CAACCGCGGCTCATCACACCAAGTGGAATACGAGAT...TTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp TTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCCTCTTCTGCAACCTTaGTACCCTCCAAGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: FFLFCNLGTLQGCASHTFPLLQP*YPPRLC
Trigger: GCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGG...AAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp AGGGCATCTCTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCCCTCTTCTGCAACCTTaGTACCCTCCAAGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: RASLSVLTNVTESGGLTIPLLQP*YPPRLC
Trigger: GCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGG...GATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAGAGATGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTCCACTGCCAGAAATCTaGAGACTGAATTGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGPLPEI*RLNCLG
Trigger: ACCCAGACAATTCAGTCTCCAGATTTCTGGCAGTGG...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATCCTATCAGAGGCATGTaGCCTTTGTGGCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHPIRGM*PLWLGP
Trigger: GGGCCCCAGCCACAAAGGCCACATGCCTCTGATAGG...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp CTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTGAATTGCTTGAACCTTaGCCAGGGTCTCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LFPLLQPWYPPRLCLSYLELLEP*PGSLPV
Trigger: AACAGGCAGAGACCCTGGCCAAGGTTCAAGCAATTC...AAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000401751.5
ENST00000402286.5
CDS-3UTR CCA 90 bp AATCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAAGAATTGCTTGAACCTTaGCCAGGGTCTCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: NHVQLLSHLHPTFWSSIQELLEP*PGSLPV
Trigger: AACAGGCAGAGACCCTGGCCAAGGTTCAAGCAATTC...TTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401751.5
ENST00000402286.5
CDS-3UTR TCA 90 bp GAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATAAATCAGGAATGGCTTCATaGGGTTGTAGCCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: ESGGLTINFREGGSVGYKSGMAS*GCSPQG
Trigger: TCCCTGTGGGCTACAACCTCATGAAGCCATTCCTGA...TTTATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp TGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTTGCTTTTTCGTGATGAGCCGCGGTTaGTCTGCACCGAGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: CYLLSFMTPTSCLYPCFFVMSRG*SAPSAR
Trigger: ACGAGCACTCGGTGCAGATCAACCGCGGCTCATCAC...GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp AGGGCATCTCTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCATGAGAACTGCCACCTaGGAACGCAGCCTGGAAATA +
Preference number: 4 (lower is better)
Translates to: RASLSVLTNVTESGGLTIMRTAT*ERSLEI
Trigger: TATTTCCAGGCTGCGTTCTCAGGTGGCAGTTCTCAT...GATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAGAGATGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CTACTATATATAGGGAGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAACGGCCTCTGAGCAGGTaGGGTTCCCATCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: LLYIGSGSKKDLDMSPTQRPLSR*GSHPRA
Trigger: TGCCCGAGGATGGGAACCTCACCTGCTCAGAGGCCG...TTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACTCCCTATATATAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp AATCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAAAAGTCAGACAAAGCCTaGTGTAGGCAGCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: NHVQLLSHLHPTFWSSIQKSDKA*CRQLLS
Trigger: TGATAGGAGCTGCCTACATCAGGCTTTGTCTGACTT...TTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR GCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCAAAGCCTCCGACTTCTaGAAGTCAAAATTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQAKASDF*KSKFRA
Trigger: AGCTCGGAATTTTGACTTGCAGAAGTCGGAGGCTTT...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR GCA 90 bp TTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCAGTCTTGAGCAGGTCCTaGTTGGTGACTGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LDMSPTQVAHSHTEGIQAVLSRS*LVTEKS
Trigger: GCTCTTCTCAGTCACCAAGCAGGACCTGCTCAAGAC...TGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp AATCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATATCATATTTCTGCATaGCCTCGTCAGGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NHVQLLSHLHPTFWSSIQYHISA*PRQGAG
Trigger: TCCTGCTCCCTGACGAGGGCATGCAGAAATATGATA...TTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CACAGGGAACAGTTTGGTAGCTTTCACGATGAGCATGAACTTCAGGGTCTCTGGTGCTTTTTCCTCTTCTaGAACCTTGGTACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: HREQFGSFHDEHELQGLWCFFLF*NLGTLQ
Trigger: TTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCA...CCAGAGACCCTGAAGTTCATGCTCATCGTGAAAGCTACCAAACTGTTCCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR GCA 90 bp ACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATGACACCCACTTCTTaGCTTTACCCTTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TAVESPAPYLLVLHSMPQMTPTS*LYPCFF
Trigger: GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCAT...TTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp AGGGCATCTCTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCGCAGGAAGCACATCCTaGACGTTTTCTCGGAACTTG +
Preference number: 4 (lower is better)
Translates to: RASLSVLTNVTESGGLTIAGSTS*TFSRNL
Trigger: CAAGTTCCGAGAAAACGTCCAGGATGTGCTTCCTGC...GATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAGAGATGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215812.9
CDS-3UTR CCA 90 bp CTGCCTTTGCTTCCAGGAAAGTCCCTAAAACATAAGCTATGTGCAACAAGGGAACTTCTGGATCACCTCTaGGGGCTGCCAATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: LPLLPGKSLKHKLCATRELLDHL*GLPIKD
Trigger: ATCCTTGATTGGCAGCCCCCAGAGGTGATCCAGAAG...TTCCCTTGTTGCACATAGCTTATGTTTTAGGGACTTTCCTGGAAGCAAAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215812.9
CDS-3UTR CCA 90 bp TGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTTGCTTTTTCAGGGTGCCCCCAAACTaGGCAGGCAGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: CYLLSFMTPTSCLYPCFFRVPPN*AGSSSG
Trigger: TCCTGAGGAACTGCCTGCCCAGTTTGGGGGCACCCT...GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp CCTTGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATTCTTGGTTAAACATTTaGGGTTCCCATCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PCFFLFCNLGTLQGCASHSWLNI*GSHLGQ
Trigger: CTGACCCAGATGGGAACCCCAAATGTTTAACCAAGA...ATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCTCTTGGTTAAACATTTaGGGTTCCCATCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQASWLNI*GSHLGQ
Trigger: CTGACCCAGATGGGAACCCCAAATGTTTAACCAAGA...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp CACAGGGAACAGTTTGGTAGCTTTCACGATGAGCATGAACTTCAGGGTCTCTGGTCTTGGTTAAACATTTaGGGTTCCCATCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: HREQFGSFHDEHELQGLWSWLNI*GSHLGQ
Trigger: CTGACCCAGATGGGAACCCCAAATGTTTAACCAAGA...CCAGAGACCCTGAAGTTCATGCTCATCGTGAAAGCTACCAAACTGTTCCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR CCA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATATCTCGTATTCCACTTaGTGTGATGAGCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: TESGGLTINFREGGSVGYISYST*CDEPRL
Trigger: CAACCGCGGCTCATCACACCAAGTGGAATACGAGAT...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATGCAGGAAGCACATCCTaGACGTTTTCTCGGAACTGT +
Preference number: 4 (lower is better)
Translates to: TESGGLTINFREGGSVGYAGSTS*TFSRNC
Trigger: ACAGTTCCGAGAAAACGTCCAGGATGTGCTTCCTGC...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
CDS-3UTR CCA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATCTCACAGAGGGTAAATaGCAAAGCCAGGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TESGGLTINFREGGSVGYLTEGK*QSQVSA
Trigger: TGCTGAGACCTGGCTTTGCCATTTACCCTCTGTGAG...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS-3UTR CCA 90 bp CAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAAACTTCTGGATCACCATaGTATAAAAAGCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: QLLSHLHPTFWSSIQCHKTSGSP*YKKHCP
Trigger: GGGACAGTGCTTTTTATACCATGGTGATCCAGAAGT...TTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS-3UTR TCA 90 bp AGGGCATCTCTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCCCACCTAGACAGGGGTaGGCTCCTTATCATATTTCT +
Preference number: 4 (lower is better)
Translates to: RASLSVLTNVTESGGLTIPPRQG*APYHIS
Trigger: AGAAATATGATAAGGAGCTCACCCCTGTCTAGGTGG...GATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAGAGATGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp TGTGGCTGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGGCCACAAATATACACTaGGCATCTACTATATATAGG +
Preference number: 4 (lower is better)
Translates to: CGWGPQKTATARNLETELATNIH*ASTIYR
Trigger: CCTATATATAGTAGATGCTCAGTGTATATTTGTGGC...CAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR TCA 90 bp AGGGCATCTCTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCCAGAAATCTGGAGACTaGATTGTCTGGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RASLSVLTNVTESGGLTIQKSGD*IVWVSR
Trigger: TCTGGAGACCCAGACAATTCAGTCTCCAGATTTCTG...GATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAGAGATGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR GCA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTAAAGCCTCCGACTTCTaGAAGTCAAAATTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPKASDF*KSKFRA
Trigger: AGCTCGGAATTTTGACTTGCAGAAGTCGGAGGCTTT...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTAAAGCCTCCGACTTCTaGAAGTCAAAATTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: LFPLLQPWYPPRLCLSYLKASDF*KSKFRA
Trigger: AGCTCGGAATTTTGACTTGCAGAAGTCGGAGGCTTT...AAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp TTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCAATCACCTCTGGGGGCTaGCAATCAAGGATATGGTCA +
Preference number: 4 (lower is better)
Translates to: LDMSPTQVAHSHTEGIQAITSGG*QSRIWS
Trigger: TGACCATATCCTTGATTGGCAGCCCCCAGAGGTGAT...TGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000434642.5
CDS-3UTR GCA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGTCTTGAGCAGGTCCTaGTTGGTGACTGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQVLSRS*LVTEKS
Trigger: GCTCTTCTCAGTCACCAAGCAGGACCTGCTCAAGAC...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAACACACTCATGCAGGATaGGCTCACAGTCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQHTHAG*AHSPSS
Trigger: AGATGAGGGACTGTGAGCGCATCCTGCATGAGTGTG...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATATACACTGAGCATGACACCCACTTCTTaGCTTTACCCTTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HLHPTFWSSIQCHKYTLSMTPTS*LYPCFF
Trigger: GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCAT...GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CCCACAGGGAACAGTTTGGTAGCTTTCACGATGAGCATGAACTTCAGGGTCTCTTGGTCCTCCATTCAATaGCACAAATATACACTGAGC +
Preference number: 4 (lower is better)
Translates to: PTGNSLVAFTMSMNFRVSWSSIQ*HKYTLS
Trigger: GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCA...AGAGACCCTGAAGTTCATGCTCATCGTGAAAGCTACCAAACTGTTCCCTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR CCA 90 bp GTGGCTGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGTCAAATATCATCACGATaGTCTCAATCTTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: VAGALKRQPLPEIWRLNCQISSR*SQSSSL
Trigger: TAGGGAAGAAGATTGAGACCATCGTGATGATATTTG...ACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATAGGCCAAAGAACTCCTaGTACACTTCTACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TESGGLTINFREGGSVGYRPKNS*YTSTRG
Trigger: ACCTCTGGTAGAAGTGTACCAGGAGTTCTTTGGCCT...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATGCACGTACATGGACTTaGGGATCTCCCCGCCATAGT +
Preference number: 4 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHARTWT*GSPRHS
Trigger: ACTATGGCGGGGAGATCCCCAAGTCCATGTACGTGC...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp TTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCAATCTCGTATTCCACTTaGTGTGATGAGCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: LDMSPTQVAHSHTEGIQAISYST*CDEPRL
Trigger: CAACCGCGGCTCATCACACCAAGTGGAATACGAGAT...TGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp CTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGCTGCACCCTACCTTCTaGTCCTCCATTCAATGCCAC +
Preference number: 4 (lower is better)
Translates to: LSVLTNVTESGGLTINFRLHPTF*SSIQCH
Trigger: GTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAG...CCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp TGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTTGCTTTTTCGATCAAGTGGCCCAATaGTGTCATACCACACGGGGC +
Preference number: 4 (lower is better)
Translates to: CYLLSFMTPTSCLYPCFFDQVAQ*CHTTRG
Trigger: GCCCCGTGTGGTATGACATCATTGGGCCACTTGATC...GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGATCATGTACAGCTGTTaGGTCACCTGCACCCTACCT +
Preference number: 4 (lower is better)
Translates to: LSVLTNVTESGGLTINFRIMYSC*VTCTLP
Trigger: AGGTAGGGTGCAGGTGACTCAACAGCTGTACATGAT...CCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAATCATGTACAGCTGTTaGGTCACCTGCACCCTACCT +
Preference number: 4 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQIMYSC*VTCTLP
Trigger: AGGTAGGGTGCAGGTGACTCAACAGCTGTACATGAT...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGATCACCTCTGGGGGCTaGCAATCAAGGATATGGTCA +
Preference number: 4 (lower is better)
Translates to: LSVLTNVTESGGLTINFRITSGG*QSRIWS
Trigger: TGACCATATCCTTGATTGGCAGCCCCCAGAGGTGAT...CCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000434642.5
CDS-3UTR GCA 90 bp GAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATAAATCCTTATCATATTTCTaGATGCCCTCGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ESGGLTINFREGGSVGYKSLSYF*MPSSGS
Trigger: GCTCCCTGACGAGGGCATGCAGAAATATGATAAGGA...TTTATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTATGACACCCACTTCTTaGCTTTACCCTTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPMTPTS*LYPCFF
Trigger: GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCAT...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTTGGTCCTCCATTCAATaGCACAAATATACACTGAGC +
Preference number: 4 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPWSSIQ*HKYTLS
Trigger: GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCA...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp GCTAGGGGATTCATTTTGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTCTGAGGCAGGAGAATTaGTTGAACCTTGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ARGFILLFIEFHDTHFLPLRQEN*LNLGQG
Trigger: ACCCTGGCCAAGGTTCAAGCAATTCTCCTGCCTCAG...AGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCAAAATGAATCCCCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000401751.5
ENST00000402286.5
CDS-3UTR GCA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATCTGAGGCAGGAGAATTaGTTGAACCTTGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHLRQEN*LNLGQG
Trigger: ACCCTGGCCAAGGTTCAAGCAATTCTCCTGCCTCAG...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000401751.5
ENST00000402286.5
CDS-3UTR GCA 90 bp CTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGCCTTTCTCTGGGGGCTaGCAATCAAGGATATGGTCA +
Preference number: 4 (lower is better)
Translates to: LSVLTNVTESGGLTINFRPFSGG*QSRIWS
Trigger: TGACCATATCCTTGATTGGCAGCCCCCAGAGAAAGG...CCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS-3UTR CCA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCTGCCAATCAAGGATATaGTCAATATCCATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: EKELTGDHVGGESSYTQACQSRI*SISMVF
Trigger: GAAGACCATGGATATTGACCATATCCTTGATTGGCA...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CCA 90 bp GCTAGGGGATTCATTTTGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTCTTCTGGATCACCTCTaGGGGCTGCCAATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: ARGFILLFIEFHDTHFLPLLDHL*GLPIKD
Trigger: ATCCTTGATTGGCAGCCCCCAGAGGTGATCCAGAAG...AGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCAAAATGAATCCCCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000434642.5
CDS-3UTR CCA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAACCCCTTGGGATCAAGTaGCCCAATGATGTCATACCA +
Preference number: 4 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQPLGIK*PNDVIP
Trigger: TGGTATGACATCATTGGGCCACTTGATCCCAAGGGG...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp TGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTTGCTTTTTCGCACGTACATGGACTTaGGGATCTCCCCGCCATAGT +
Preference number: 4 (lower is better)
Translates to: CYLLSFMTPTSCLYPCFFARTWT*GSPRHS
Trigger: ACTATGGCGGGGAGATCCCCAAGTCCATGTACGTGC...GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCAGGAAGCACATCCTaGACGTTTTCTCGGAACTGT +
Preference number: 4 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQAGSTS*TFSRNC
Trigger: ACAGTTCCGAGAAAACGTCCAGGATGTGCTTCCTGC...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
3UTR CAA 72 bp ATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTaGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCA +
Preference number: 4 (lower is better)
Translates to: IEFHDTHFLPLP*LFPLLQPWYPP
Trigger: TGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CTACTATATATAGGGAGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTCCTGCTTGGTGACTaGGAAGAGCAACCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LLYIGSGSKKDLDMSPTQVLLGD*EEQPLG
Trigger: CCCAAGGGGTTGCTCTTCTCAGTCACCAAGCAGGAC...TTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACTCCCTATATATAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CTACTATATATAGGGAGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGCAGGTCCTGCTTGGTaGCTGAGAAGAGCAACCCCT +
Preference number: 4 (lower is better)
Translates to: LLYIGSGSKKDLDMSPTQAGPAW*LRRATP
Trigger: AGGGGTTGCTCTTCTCAGTCACCAAGCAGGACCTGC...TTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACTCCCTATATATAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATATGAGAACTGCCACCTaGGAACGCAGCCTGGAAATA +
Preference number: 4 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHMRTAT*ERSLEI
Trigger: TATTTCCAGGCTGCGTTCTCAGGTGGCAGTTCTCAT...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTGCCACAAATATACACTaGGCATCTACTATATATAGG +
Preference number: 4 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGATNIH*ASTIYR
Trigger: CCTATATATAGTAGATGCTCAGTGTATATTTGTGGC...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp TGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTTGCTTTTTCGTCTTGAGCAGGTCCTaGTTGGTGACTGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: CYLLSFMTPTSCLYPCFFVLSRS*LVTEKS
Trigger: GCTCTTCTCAGTCACCAAGCAGGACCTGCTCAAGAC...GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp TGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTTGCTTTTTCCACACTCATGCAGGATaGGCTCACAGTCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: CYLLSFMTPTSCLYPCFFHTHAG*AHSPSS
Trigger: AGATGAGGGACTGTGAGCGCATCCTGCATGAGTGTG...GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAATATCATATTTCTGCATaGCCTCGTCAGGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQYHISA*PRQGAG
Trigger: TCCTGCTCCCTGACGAGGGCATGCAGAAATATGATA...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGTATCATATTTCTGCATaGCCTCGTCAGGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSVLTNVTESGGLTINFRYHISA*PRQGAG
Trigger: TCCTGCTCCCTGACGAGGGCATGCAGAAATATGATA...CCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp AGGGCATCTCTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCATGACACCCACTTCTTaGCTTTACCCTTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RASLSVLTNVTESGGLTIMTPTS*LYPCFF
Trigger: GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCAT...GATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAGAGATGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp AGGGCATCTCTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCTGGTCCTCCATTCAATaGCACAAATATACACTGAGC +
Preference number: 4 (lower is better)
Translates to: RASLSVLTNVTESGGLTIWSSIQ*HKYTLS
Trigger: GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCA...GATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAGAGATGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp CTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTTGATTGCCAATCAAGGATATaGTCAATATCCATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LFCNLGTLQGCASHTFLDCQSRI*SISMVF
Trigger: GAAGACCATGGATATTGACCATATCCTTGATTGGCA...ATCAAGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp TCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCAAATATCATCACGATaGTCTCAATCTTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: SCTAVESPAPYLLVLHSMQISSR*SQSSSL
Trigger: TAGGGAAGAAGATTGAGACCATCGTGATGATATTTG...CATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATGCAGGAAGCACATCCTaGACGTTTTCTCGGAACTGT +
Preference number: 4 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHAGSTS*TFSRNC
Trigger: ACAGTTCCGAGAAAACGTCCAGGATGTGCTTCCTGC...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
CDS-3UTR TCA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATCCACCTAGACAGGGGTaGGCTCCTTATCATATTTCT +
Preference number: 4 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHPPRQG*APYHIS
Trigger: AGAAATATGATAAGGAGCTCACCCCTGTCTAGGTGG...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp TGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTTGCTTTTTCATCATGTACAGCTGTTaGGTCACCTGCACCCTACCT +
Preference number: 4 (lower is better)
Translates to: CYLLSFMTPTSCLYPCFFIMYSC*VTCTLP
Trigger: AGGTAGGGTGCAGGTGACTCAACAGCTGTACATGAT...GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp CTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGTGCTTTTTCCTCTTCTaGAACCTTGGTACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LSVLTNVTESGGLTINFRCFFLF*NLGTLQ
Trigger: TTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCA...CCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp GAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATAAATGGTCCTCCATTCAATaGCACAAATATACACTGAGC +
Preference number: 4 (lower is better)
Translates to: ESGGLTINFREGGSVGYKWSSIQ*HKYTLS
Trigger: GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCA...TTTATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp TTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTTGCCAATCAAGGATATaGTCAATATCCATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: FFLFCNLGTLQGCASHTFCQSRI*SISMVF
Trigger: GAAGACCATGGATATTGACCATATCCTTGATTGGCA...AAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp CTACTATATATAGGGAGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAATCAGGAATGGCTTCATaGGGTTGTAGCCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: LLYIGSGSKKDLDMSPTQSGMAS*GCSPQG
Trigger: TCCCTGTGGGCTACAACCTCATGAAGCCATTCCTGA...TTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACTCCCTATATATAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp TGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTTGCTTTTTCAAGTCAGACAAAGCCTaGTGTAGGCAGCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: CYLLSFMTPTSCLYPCFFKSDKA*CRQLLS
Trigger: TGATAGGAGCTGCCTACATCAGGCTTTGTCTGACTT...GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR GCA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATAAAGCCTCCGACTTCTaGAAGTCAAAATTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHKASDF*KSKFRA
Trigger: AGCTCGGAATTTTGACTTGCAGAAGTCGGAGGCTTT...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR TCA 90 bp TTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCAGCCACAAATATACACTaGGCATCTACTATATATAGG +
Preference number: 4 (lower is better)
Translates to: LDMSPTQVAHSHTEGIQAATNIH*ASTIYR
Trigger: CCTATATATAGTAGATGCTCAGTGTATATTTGTGGC...TGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp TGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTTGCTTTTTCTGCTTTTTCCTCTTCTaGAACCTTGGTACCCTCCAA +
Preference number: 4 (lower is better)
Translates to: CYLLSFMTPTSCLYPCFFCFFLF*NLGTLQ
Trigger: TTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCA...GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR GCA 90 bp TGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTTGCTTTTTCTATGCCAGATGTGACTaGCTTTGCTTCCAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: CYLLSFMTPTSCLYPCFFYARCD*LCFQES
Trigger: ACTTTCCTGGAAGCAAAGGCAGTCACATCTGGCATA...GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CCA 90 bp GCTAGGGGATTCATTTTGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTATGGTCAATATCCATaGTCTTCCGGAACTCCATGT +
Preference number: 4 (lower is better)
Translates to: ARGFILLFIEFHDTHFLPYGQYP*SSGTPC
Trigger: ACATGGAGTTCCGGAAGACCATGGATATTGACCATA...AGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCAAAATGAATCCCCTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAATGCCAATCAAGGATATaGTCAATATCCATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQCQSRI*SISMVF
Trigger: GAAGACCATGGATATTGACCATATCCTTGATTGGCA...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp CTACTATATATAGGGAGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAACCCCTTGGGATCAAGTaGCCCAATGATGTCATACCA +
Preference number: 4 (lower is better)
Translates to: LLYIGSGSKKDLDMSPTQPLGIK*PNDVIP
Trigger: TGGTATGACATCATTGGGCCACTTGATCCCAAGGGG...TTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACTCCCTATATATAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACTTCTGGATCACCATaGTATAAAAAGCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHTSGSP*YKKHCP
Trigger: GGGACAGTGCTTTTTATACCATGGTGATCCAGAAGT...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS-3UTR CCA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAACAAATATCATCACGATaGTCTCAATCTTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQQISSR*SQSSSL
Trigger: TAGGGAAGAAGATTGAGACCATCGTGATGATATTTG...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp TGCTATTTATTGAGTTTCATGACACCCACTTCTTGCCTTTACCCTTGCTTTTTCTGCCAATCAAGGATATaGTCAATATCCATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: CYLLSFMTPTSCLYPCFFCQSRI*SISMVF
Trigger: GAAGACCATGGATATTGACCATATCCTTGATTGGCA...GAAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATGAAACTCAATAAATAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp CTACTATATATAGGGAGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAATCTTGGTTAAACATTTaGGGTTCCCATCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLYIGSGSKKDLDMSPTQSWLNI*GSHLGQ
Trigger: CTGACCCAGATGGGAACCCCAAATGTTTAACCAAGA...TTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACTCCCTATATATAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CCA 90 bp CTACTATATATAGGGAGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAACAAATATCATCACGATaGTCTCAATCTTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: LLYIGSGSKKDLDMSPTQQISSR*SQSSSL
Trigger: TAGGGAAGAAGATTGAGACCATCGTGATGATATTTG...TTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACTCCCTATATATAGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCGGTGCTGGCTGGGGCTaGAGGAGTGGTGGCCACTAT +
Preference number: 5 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIGAGWG*RSGGHY
Trigger: ATAGTGGCCACCACTCCTCAAGCCCCAGCCAGCACC...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCTGTGATGAGCCGCGGTaGATCTGCACCGAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: EARAPQPGQTPGAGLTPICDEPR*ICTECS
Trigger: CGAGCACTCGGTGCAGATCAACCGCGGCTCATCACA...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCATGACCAAGCCTCCCTaGGCCAGCTGTGCACCTGGT +
Preference number: 5 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIMTKPP*ASCAPG
Trigger: ACCAGGTGCACAGCTGGCCAAGGGAGGCTTGGTCAT...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCGCTGAGGCAGGAGAATaGCTTGAACCTTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: GSPARPNPRCRAHSYPALAEAGE*LEPWPG
Trigger: CCCTGGCCAAGGTTCAAGCAATTCTCCTGCCTCAGC...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCCAGTCTTGTCGCAGGTaGAGCAGGGGCCTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: AGLTPILLSWPPEQSLACQSCRR*SRGLLG
Trigger: CCCCAGGAGGCCCCTGCTCAACCTGCGACAAGACTG...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCGGGCATAGGACTCCCTaGGGAGAGGGGGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: AGLTPILLSWPPEQSLACGHRTP*GEGVVE
Trigger: CTCCACCACCCCCTCTCCCAAGGGAGTCCTATGCCC...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCAGGCAGGAGAATTGCTaGAACCTTGGCCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIRQENC*NLGQGL
Trigger: GAGACCCTGGCCAAGGTTCAAGCAATTCTCCTGCCT...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp GGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCCTGCTCTCCCTCCTGAGCAGAGCTaGGCATGCAGTAGATGCTCA +
Preference number: 5 (lower is better)
Translates to: GSPARPNPRCRAHSYPALPPEQS*ACSRCS
Trigger: TGAGCATCTACTGCATGCCAAGCTCTGCTCAGGAGG...GAGAGCAGGATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCGGGAGCCTTTCAGTCTaGTCGCAGGTTGAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: AGLTPILLSWPPEQSLACGSLSV*SQVEQG
Trigger: CCCCTGCTCAACCTGCGACAAGACTGAAAGGCTCCC...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCACCCATTTCTCTCCCTaGACCGTCACAGTGCATCTG +
Preference number: 5 (lower is better)
Translates to: EARAPQPGQTPGAGLTPITHFSP*TVTVHL
Trigger: CAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGT...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCACTTCTTTCCCTTCCTaGGTCTGCCCTAGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: AGLTPILLSWPPEQSLACTSFPS*VCPRPS
Trigger: AGAGGGCCTAGGGCAGACCAAGGAAGGGAAAGAAGT...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCATCTTGGTTAAACATTaGGGGTTCCCATCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIILVKH*GFPSGS
Trigger: TGACCCAGATGGGAACCCCAAATGTTTAACCAAGAT...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp AGTGGGTTAGGGTGGGAAGCTGAGCGTGCAAGTCAGACAAAGCCTGATGTAGGCTGTGATGAGCCGCGGTaGATCTGCACCGAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: SGLGWEAERASQTKPDVGCDEPR*ICTECS
Trigger: CGAGCACTCGGTGCAGATCAACCGCGGCTCATCACA...GCCTACATCAGGCTTTGTCTGACTTGCACGCTCAGCTTCCCACCCTAACCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS GCA 90 bp CTATTGTCTCAGGTGAGAAAGCTGAGGTCCTGCAGGGGAGGGCCTTaGTCACAGAGGGTAAATGGCAAAGCCAGGTCTCAGCAGGCCCTT +
Preference number: 5 (lower is better)
Translates to: LLSQVRKLRSCRGGP*SQRVNGKARSQQAL
Trigger: AAGGGCCTGCTGAGACCTGGCTTTGCCATTTACCCTCTGTGAGCAAGGCCCTCCCCTGCAGGACCTCAGCTTTCTCACCTGAGACAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS GCA 90 bp CCCTGGAAGACAGTGCTATTGTCTCAGGTGAGAAAGCTGAGGTCCTaGAGGGGAGGGCCTTGCTCACAGAGGGTAAATGGCAAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: PWKTVLLSQVRKLRS*RGGPCSQRVNGKAR
Trigger: CCTGGCTTTGCCATTTACCCTCTGTGAGCAAGGCCCTCCCCTGCAGGACCTCAGCTTTCTCACCTGAGACAATAGCACTGTCTTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS-3UTR CAA 90 bp ATGTGCAACAAGGGAAGTGGGTTAGGGTGGGAAGCTGAGCGTGCAAGTCAGACAGGTCTCAGCAGGCCCTaGGACTTCTTAGGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: MCNKGSGLGWEAERASQTGLSRP*DFLGLP
Trigger: GGGCAGACCTAAGAAGTCCAAGGGCCTGCTGAGACC...TGTCTGACTTGCACGCTCAGCTTCCCACCCTAACCCACTTCCCTTGTTGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540910.5
CDS-3UTR CAA 90 bp GAGGCTAGGGCTCCCCAGCCAGGCCAAACCCCAGGTGCAGGGCTCACTCCTATCAAAGGCCTACTTAGCTaGCATTTTCGTACCATTTGG +
Preference number: 5 (lower is better)
Translates to: EARAPQPGQTPGAGLTPIKGLLS*HFRTIW
Trigger: CCAAATGGTACGAAAATGCAAGCTAAGTAGGCCTTT...GATAGGAGTGAGCCCTGCACCTGGGGTTTGGCCTGGCTGGGGAGCCCTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp ACCAGGATCCCAGGTCACCCATTTCTCTCCCTTGACCGTCACAGTGCATCTGGGCCCACAGGGAACAGTTaGGTAGCTTTCACGATGAGC +
Preference number: 5 (lower is better)
Translates to: TRIPGHPFLSLDRHSASGPTGNS*VAFTMS
Trigger: GCTCATCGTGAAAGCTACCAAACTGTTCCCTGTGGG...CCCAGATGCACTGTGACGGTCAAGGGAGAGAAATGGGTGACCTGGGATCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp GGTCTCCAGAAGAGAGTCCAACCCCACCACACATCTGCTCCTGTCCAAGGTGCTTCCTCTTCTGCAACCTaGGTACCCTCCAAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: GLQKRVQPHHTSAPVQGASSSAT*VPSKVV
Trigger: CACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGA...AGCACCTTGGACAGGAGCAGATGTGTGGTGGGGTTGGACTCTCTTCTGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CAA 90 bp CAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAAGGTCTCAGCAGGCCCTaGGACTTCTTAGGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: QLLSHLHPTFWSSIQCHKGLSRP*DFLGLP
Trigger: GGGCAGACCTAAGAAGTCCAAGGGCCTGCTGAGACC...TTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS-3UTR CAA 90 bp GCAGGGCTCACTCCTATCCTGCTCTCTTGGCCTCCTGAGCAGAGCTTGGCATGCCTGGTTGCTCTAGTCTaGCTACTTGGTAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: AGLTPILLSWPPEQSLACLVALV*LLGKFW
Trigger: CCAGAACTTACCAAGTAGCAAGACTAGAGCAACCAG...GCATGCCAAGCTCTGCTCAGGAGGCCAAGAGAGCAGGATAGGAGTGAGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp CACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATATACACTGAGCTGTGATGAGCCGCGGTaGATCTGCACCGAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: HLHPTFWSSIQCHKYTLSCDEPR*ICTECS
Trigger: CGAGCACTCGGTGCAGATCAACCGCGGCTCATCACA...GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp GGTCTCCAGAAGAGAGTCCAACCCCACCACACATCTGCTCCTGTCCAAGGTGCTAATCATGTACAGCTGTaGAGTCACCTGCACCCTACC +
Preference number: 5 (lower is better)
Translates to: GLQKRVQPHHTSAPVQGANHVQL*SHLHPT
Trigger: GGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT...AGCACCTTGGACAGGAGCAGATGTGTGGTGGGGTTGGACTCTCTTCTGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CAA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTCTGCAGGGGAGGGCCTaGCTCACAGAGGGTAAATGG +
Preference number: 5 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGLQGRA*LTEGKW
Trigger: CCATTTACCCTCTGTGAGCAAGGCCCTCCCCTGCAG...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS-3UTR CAA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTCGGAACTCCATGTACTaGCGGAGCAAAGCCTCCGAC +
Preference number: 5 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGRNSMY*RSKASD
Trigger: GTCGGAGGCTTTGCTCCGCAAGTACATGGAGTTCCG...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTTGTGATGAGCCGCGGTaGATCTGCACCGAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPCDEPR*ICTECS
Trigger: CGAGCACTCGGTGCAGATCAACCGCGGCTCATCACA...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp GCTGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGTCTGTCCTCTTCTGCAACCTaGGTACCCTCCAAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: AGALKRQPLPEIWRLNCLSSSAT*VPSKVV
Trigger: CACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGA...CAGACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CAA 90 bp CCTTGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATGCTGAGGCAGGAGAATaGCTTGAACCTTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PCFFLFCNLGTLQGCASHAEAGE*LEPWPG
Trigger: CCCTGGCCAAGGTTCAAGCAATTCTCCTGCCTCAGC...ATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000401751.5
ENST00000402286.5
CDS-3UTR CAA 90 bp CACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATATACACTGAGCGCTGAGGCAGGAGAATaGCTTGAACCTTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: HLHPTFWSSIQCHKYTLSAEAGE*LEPWPG
Trigger: CCCTGGCCAAGGTTCAAGCAATTCTCCTGCCTCAGC...GCTCAGTGTATATTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401751.5
ENST00000402286.5
CDS-3UTR CAA 90 bp ACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAACCCACAGGGAACAGTTaGGTAGCTTTCACGATGAGC +
Preference number: 5 (lower is better)
Translates to: TAVESPAPYLLVLHSMPQPTGNS*VAFTMS
Trigger: GCTCATCGTGAAAGCTACCAAACTGTTCCCTGTGGG...TTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp GGTCTCCAGAAGAGAGTCCAACCCCACCACACATCTGCTCCTGTCCAAGGTGCTATCTTGGTTAAACATTaGGGGTTCCCATCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: GLQKRVQPHHTSAPVQGAILVKH*GFPSGS
Trigger: TGACCCAGATGGGAACCCCAAATGTTTAACCAAGAT...AGCACCTTGGACAGGAGCAGATGTGTGGTGGGGTTGGACTCTCTTCTGGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CAA 90 bp TTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTTGTGATGAGCCGCGGTaGATCTGCACCGAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: FFLFCNLGTLQGCASHTFCDEPR*ICTECS
Trigger: CGAGCACTCGGTGCAGATCAACCGCGGCTCATCACA...AAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTCCCACAGGGAACAGTTaGGTAGCTTTCACGATGAGC +
Preference number: 5 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGPTGNS*VAFTMS
Trigger: GCTCATCGTGAAAGCTACCAAACTGTTCCCTGTGGG...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp ACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAATGGTACCCTCCAAGGTaGTGCCTCTCATACCTTTCT +
Preference number: 5 (lower is better)
Translates to: TAVESPAPYLLVLHSMPQWYPPR*CLSYLS
Trigger: AGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCA...TTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp CAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGCCACAAATGGTACCCTCCAAGGTaGTGCCTCTCATACCTTTCT +
Preference number: 5 (lower is better)
Translates to: QLLSHLHPTFWSSIQCHKWYPPR*CLSYLS
Trigger: AGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCA...TTTGTGGCATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp CTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGTCCTCTTCTGCAACCTaGGTACCCTCCAAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: LTNVTESGGLTINFREGGSSSAT*VPSKVV
Trigger: CACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGA...CCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATAGAGGCATGTGGCCTTaGTGGCTGGGGCCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: TESGGLTINFREGGSVGYRGMWP*WLGPSK
Trigger: TTTTGAGGGCCCCAGCCACAAAGGCCACATGCCTCT...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CAA 90 bp CTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTCTTGATAGGCAGGAGAATTGCTaGAACCTTGGCCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LFCNLGTLQGCASHTFLDRQENC*NLGQGL
Trigger: GAGACCCTGGCCAAGGTTCAAGCAATTCTCCTGCCT...ATCAAGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401751.5
ENST00000402286.5
CDS-3UTR CAA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATGGTGCTGGCTGGGGCTaGAGGAGTGGTGGCCACTAT +
Preference number: 5 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHGAGWG*RSGGHY
Trigger: ATAGTGGCCACCACTCCTCAAGCCCCAGCCAGCACC...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215812.9
CDS-3UTR CAA 90 bp TTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATACCTTTACGTTTTCTCGGAACTaGGCCAGGGTCTCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: FFLFCNLGTLQGCASHTFTFSRN*ARVSAC
Trigger: ACAGGCAGAGACCCTGGCCAAGTTCCGAGAAAACGT...AAAGGTATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215812.9
CDS-3UTR CAA 90 bp CTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGTGGTACCCTCCAAGGTaGTGCCTCTCATACCTTTCT +
Preference number: 5 (lower is better)
Translates to: LTNVTESGGLTINFREGGWYPPR*CLSYLS
Trigger: AGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCA...CCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp GTGGCTGGGGCCCTCAAAAGACAGCCACTGCCAGAAATCTGGAGACTGAATTGTCATGACACCCACTTCTaGCCTTTACCCTTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: VAGALKRQPLPEIWRLNCHDTHF*PLPLLF
Trigger: AAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATG...ACAATTCAGTCTCCAGATTTCTGGCAGTGGCTGTCTTTTGAGGGCCCCAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CAA 90 bp ATGTGCAACAAGGGAAGTGGGTTAGGGTGGGAAGCTGAGCGTGCAAGTCAGACACATGACACCCACTTCTaGCCTTTACCCTTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: MCNKGSGLGWEAERASQTHDTHF*PLPLLF
Trigger: AAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATG...TGTCTGACTTGCACGCTCAGCTTCCCACCCTAACCCACTTCCCTTGTTGCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CAA 90 bp TGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTAATCATGTACAGCTGTaGAGTCACCTGCACCCTACC +
Preference number: 5 (lower is better)
Translates to: CSQPYGRNSSIHTCLRVGNHVQL*SHLHPT
Trigger: GGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT...ACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp CTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGCGGAACTCCATGTACTaGCGGAGCAAAGCCTCCGAC +
Preference number: 5 (lower is better)
Translates to: LSVLTNVTESGGLTINFRRNSMY*RSKASD
Trigger: GTCGGAGGCTTTGCTCCGCAAGTACATGGAGTTCCG...CCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATCCCACAGGGAACAGTTaGGTAGCTTTCACGATGAGC +
Preference number: 5 (lower is better)
Translates to: TESGGLTINFREGGSVGYPTGNS*VAFTMS
Trigger: GCTCATCGTGAAAGCTACCAAACTGTTCCCTGTGGG...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp CAGCCATACGGAAGGAATTCAAGCATACACACCTGCCTTAGGGTAGGTGAGGACATCTTGGTTAAACATTaGGGGTTCCCATCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: QPYGRNSSIHTCLRVGEDILVKH*GFPSGS
Trigger: TGACCCAGATGGGAACCCCAAATGTTTAACCAAGAT...GTCCTCACCTACCCTAAGGCAGGTGTGTATGCTTGAATTCCTTCCGTATGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp ACAGAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATTCCTCTTCTGCAACCTaGGTACCCTCCAAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: TESGGLTINFREGGSVGYSSSAT*VPSKVV
Trigger: CACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGA...ATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTAATCATGTACAGCTGTaGAGTCACCTGCACCCTACC +
Preference number: 5 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPNHVQL*SHLHPT
Trigger: GGTAGGGTGCAGGTGACTCAACAGCTGTACATGATT...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAAGAGGCATGTGGCCTTaGTGGCTGGGGCCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQRGMWP*WLGPSK
Trigger: TTTTGAGGGCCCCAGCCACAAAGGCCACATGCCTCT...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS CCA 90 bp GCAGGGAGGGGTAAAGGCCTACTTAGCTTGCATTTTCGTACCATTTaGTATGCCATCACTTGCGAGTTTGAGTGTGAGTTCTGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: AGRGKGLLSLHFRTI*YAITCEFECEFCSS
Trigger: TGAGCTACAGAACTCACACTCAAACTCGCAAGTGATGGCATACCAAATGGTACGAAAATGCAAGCTAAGTAGGCCTTTACCCCTCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp TTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCACCCACAGGGAACAGTTaGGTAGCTTTCACGATGAGC +
Preference number: 5 (lower is better)
Translates to: LDMSPTQVAHSHTEGIQAPTGNS*VAFTMS
Trigger: GCTCATCGTGAAAGCTACCAAACTGTTCCCTGTGGG...TGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp TCATGTACAGCTGTTGAGTCACCTGCACCCTACCTTCTGGTCCTCCATTCAATGATCTTGGTTAAACATTaGGGGTTCCCATCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: SCTAVESPAPYLLVLHSMILVKH*GFPSGS
Trigger: TGACCCAGATGGGAACCCCAAATGTTTAACCAAGAT...CATTGAATGGAGGACCAGAAGGTAGGGTGCAGGTGACTCAACAGCTGTACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp CCTTGCTTTTTCCTCTTCTGCAACCTTGGTACCCTCCAAGGTTGTGCCTCTCATATCTTGGTTAAACATTaGGGGTTCCCATCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: PCFFLFCNLGTLQGCASHILVKH*GFPSGS
Trigger: TGACCCAGATGGGAACCCCAAATGTTTAACCAAGAT...ATGAGAGGCACAACCTTGGAGGGTACCAAGGTTGCAGAAGAGGAAAAAGCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp GATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAAGGCAGGAGAATTGCTaGAACCTTGGCCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: DLDMSPTQVAHSHTEGIQRQENC*NLGQGL
Trigger: GAGACCCTGGCCAAGGTTCAAGCAATTCTCCTGCCT...TTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401751.5
ENST00000402286.5
CDS-3UTR CAA 90 bp GAAAAAGAATTAACTGGAGACCACGTAGGGGGTGAGTCCTCTTACACACAGGCCGCATTTTCGTACCATTaGGTATGCCATCACTTGCGA +
Preference number: 5 (lower is better)
Translates to: EKELTGDHVGGESSYTQAAFSYH*VCHHLR
Trigger: TCGCAAGTGATGGCATACCAAATGGTACGAAAATGC...GGCCTGTGTGTAAGAGGACTCACCCCCTACGTGGTCTCCAGTTAATTCTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp TCTCCAACCCAAGTTGCTCACAGCCATACGGAAGGAATTCAAGCATACACACCTCATGACACCCACTTCTaGCCTTTACCCTTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: SPTQVAHSHTEGIQAYTPHDTHF*PLPLLF
Trigger: AAAAAGCAAGGGTAAAGGCAAGAAGTGGGTGTCATG...AGGTGTGTATGCTTGAATTCCTTCCGTATGGCTGTGAGCAACTTGGGTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp CTTTCTGTACTCACTAACGTCACAGAGTCAGGAGGACTAACAATCAATTTCAGGTGGTACCCTCCAAGGTaGTGCCTCTCATACCTTTCT +
Preference number: 5 (lower is better)
Translates to: LSVLTNVTESGGLTINFRWYPPR*CLSYLS
Trigger: AGAAAGGTATGAGAGGCACAACCTTGGAGGGTACCA...CCTGAAATTGATTGTTAGTCCTCCTGACTCTGTGACGTTAGTGAGTACAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp GAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATAAAAATCTGGAGACTGAATaGTCTGGGTCTCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: ESGGLTINFREGGSVGYKNLETE*SGSPEE
Trigger: CTCTTCTGGAGACCCAGACAATTCAGTCTCCAGATT...TTTATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CAA 90 bp CTACTATATATAGGGAGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAACTGCAGGGGAGGGCCTaGCTCACAGAGGGTAAATGG +
Preference number: 5 (lower is better)
Translates to: LLYIGSGSKKDLDMSPTQLQGRA*LTEGKW
Trigger: CCATTTACCCTCTGTGAGCAAGGCCCTCCCCTGCAG...TTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACTCCCTATATATAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS GCA 90 bp GGCCTACTTAGCTTGCATTTTCGTACCATTTGGTATGCCATCACTTaGGAGTTTGAGTGTGAGTTCTGTAGCTCATGGCTGCATATAATC +
Preference number: 5 (lower is better)
Translates to: GLLSLHFRTIWYAIT*EFECEFCSSWLHII
Trigger: GATTATATGCAGCCATGAGCTACAGAACTCACACTCAAACTCGCAAGTGATGGCATACCAAATGGTACGAAAATGCAAGCTAAGTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS-3UTR CAA 90 bp GAGTCAGGAGGACTAACAATCAATTTCAGGGAGGGAGGGAGTGTAGGATATAAAATCTTGGTTAAACATTaGGGGTTCCCATCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: ESGGLTINFREGGSVGYKILVKH*GFPSGS
Trigger: TGACCCAGATGGGAACCCCAAATGTTTAACCAAGAT...TTTATATCCTACACTCCCTCCCTCCCTGAAATTGATTGTTAGTCCTCCTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS-3UTR CAA 90 bp CTACTATATATAGGGAGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGACAGAGACTCCATCTaGGCCAGGGTCTCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: LLYIGSGSKKDLDMSPTQDRDSI*ARVSAC
Trigger: ACAGGCAGAGACCCTGGCCAAGATGGAGTCTCTGTC...TTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACTCCCTATATATAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434642.5
CDS-3UTR CAA 90 bp AGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAAGTTGCTCACAGCCATAATCTGGAGACTGAATaGTCTGGGTCTCCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: SGSKKDLDMSPTQVAHSHNLETE*SGSPEE
Trigger: CTCTTCTGGAGACCCAGACAATTCAGTCTCCAGATT...ATGGCTGTGAGCAACTTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000540910.5
CDS-3UTR CAA 90 bp CTACTATATATAGGGAGTGGAAGTAAAAAGGATTTAGATATGTCTCCAACCCAACCCACAGGGAACAGTTaGGTAGCTTTCACGATGAGC +
Preference number: 5 (lower is better)
Translates to: LLYIGSGSKKDLDMSPTQPTGNS*VAFTMS
Trigger: GCTCATCGTGAAAGCTACCAAACTGTTCCCTGTGGG...TTGGGTTGGAGACATATCTAAATCCTTTTTACTTCCACTCCCTATATATAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000215812.9
ENST00000401751.5
ENST00000402286.5
ENST00000434642.5
ENST00000540910.5
CDS TCA 72 bp TCTCCAACTCGGCCGCTCATGGTGCTGGCTGGGGCTTaGGGAGTGGTGGCCACTATAGGCAAGAGGCCAAGC +
Preference number: 6 (lower is better)
Translates to: SPTRPLMVLAGA*GVVATIGKRPS
Trigger: GCTTGGCCTCTTGCCTATAGTGGCCACCACTCCTCAAGCCCCAGCCAGCACCATGAGCGGCCGAGTTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000403066.5
CDS CAA 72 bp GTCTCCAACTCGGCCGCTCATGGTGCTGGCTGGGGCTaGAGGAGTGGTGGCCACTATAGGCAAGAGGCCAAG +
Preference number: 6 (lower is better)
Translates to: VSNSAAHGAGWG*RSGGHYRQEAK
Trigger: CTTGGCCTCTTGCCTATAGTGGCCACCACTCCTCAAGCCCCAGCCAGCACCATGAGCGGCCGAGTTGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215812.9
ENST00000403066.5
CDS CCA 72 bp GTCCTGCAGGGGAGGGCCTTGCTCACAGAGGGTAAATaGCAAAGCCAGGTCTCAGCAGGCCCTTGGACTTCT +
Preference number: 6 (lower is better)
Translates to: VLQGRALLTEGK*QSQVSAGPWTS
Trigger: AGAAGTCCAAGGGCCTGCTGAGACCTGGCTTTGCCATTTACCCTCTGTGAGCAAGGCCCTCCCCTGCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS CAA 90 bp GCTATTGTCTCAGGTGAGAAAGCTGAGGTCCTGCAGGGGAGGGCCTaGCTCACAGAGGGTAAATGGCAAAGCCAGGTCTCAGCAGGCCCT +
Preference number: 6 (lower is better)
Translates to: AIVSGEKAEVLQGRA*LTEGKWQSQVSAGP
Trigger: AGGGCCTGCTGAGACCTGGCTTTGCCATTTACCCTCTGTGAGCAAGGCCCTCCCCTGCAGGACCTCAGCTTTCTCACCTGAGACAATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS CAA 90 bp CACCATGGTATAAAAAGCACTGTCCCTCCCTGGAAGACAGTGCTATaGTCTCAGGTGAGAAAGCTGAGGTCCTGCAGGGGAGGGCCTTGC +
Preference number: 6 (lower is better)
Translates to: HHGIKSTVPPWKTVL*SQVRKLRSCRGGPC
Trigger: GCAAGGCCCTCCCCTGCAGGACCTCAGCTTTCTCACCTGAGACAATAGCACTGTCTTCCAGGGAGGGACAGTGCTTTTTATACCATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS CAA 72 bp ATAAAAAGCACTGTCCCTCCCTGGAAGACAGTGCTATaGTCTCAGGTGAGAAAGCTGAGGTCCTGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: IKSTVPPWKTVL*SQVRKLRSCRG
Trigger: TCCCCTGCAGGACCTCAGCTTTCTCACCTGAGACAATAGCACTGTCTTCCAGGGAGGGACAGTGCTTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402286.5
ENST00000540910.5
CDS GCA 72 bp AGTTACTGGCAGGGAGGGGTAAAGGCCTACTTAGCTTaGATTTTCGTACCATTTGGTATGCCATCACTTGCG +
Preference number: 6 (lower is better)
Translates to: SYWQGGVKAYLA*IFVPFGMPSLA
Trigger: CGCAAGTGATGGCATACCAAATGGTACGAAAATGCAAGCTAAGTAGGCCTTTACCCCTCCCTGCCAGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS GCA 72 bp AGCTTGCATTTTCGTACCATTTGGTATGCCATCACTTaGGAGTTTGAGTGTGAGTTCTGTAGCTCATGGCTG +
Preference number: 6 (lower is better)
Translates to: SLHFRTIWYAIT*EFECEFCSSWL
Trigger: CAGCCATGAGCTACAGAACTCACACTCAAACTCGCAAGTGATGGCATACCAAATGGTACGAAAATGCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403066.5
CDS CCA 72 bp GGTAAAGGCCTACTTAGCTTGCATTTTCGTACCATTTaGTATGCCATCACTTGCGAGTTTGAGTGTGAGTTC +
Preference number: 6 (lower is better)
Translates to: GKGLLSLHFRTI*YAITCEFECEF
Trigger: GAACTCACACTCAAACTCGCAAGTGATGGCATACCAAATGGTACGAAAATGCAAGCTAAGTAGGCCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403066.5